BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009255
         (539 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/542 (69%), Positives = 448/542 (82%), Gaps = 6/542 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  + C PDNVTYNTILDAL KKG+L + RDLL DMK +GL+PNR TYNILV GYCK+GW
Sbjct: 234 MGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA  V++LMTQN  LPDVWTYNMLING CN G +EEAF+LR EME+LKLLPDVV+YNT
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   E  +  EAFKL++E+ E G+KPNAVTHNIM+KWYCKEGK+D A   +  MEE+G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSPDCVTYNTLI+  CKAGNM EAFR MD MGRK +KM+++TLNTIL TLC EKKL+EAY
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+SA KRGY++DEVSYGTLI GYF+D   +RALKLWDEMKE++I+PST TYN +I GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GKTEQAI  LNELL+SG++PDETT+NTI+HG+C EG VEKA QFHNKMVE SFKPD+
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            TCNILL GLC EG+LEKALK F +W+ KGKA+D+VTYNTLI+SLCKE RL+DAF LLSE
Sbjct: 594 FTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT------ 474
           MEEK+LGPD YTY AI TAL +SGR+ EA++F S M+E G +  QV+Q + ++T      
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSET 713

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            EE D SS++YSE I E C++G+YKDA++IF E++QKGI ++KSTY+NLM+GLIKRRKSI
Sbjct: 714 SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSI 773

Query: 535 SK 536
           SK
Sbjct: 774 SK 775



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 244/479 (50%), Gaps = 32/479 (6%)

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++ L + +K+L D       I  +  +G    AF++ K+M+ L+L P+++T NTL+N 
Sbjct: 125 LSILRLTSPSKALLDT-----AIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS 179

Query: 125 F--FESGRSM----EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
              + S  S+    EAF   ++  + GI PN  T NI+I  YC E K   A + +  M +
Sbjct: 180 LVRYPSSHSVSFSREAF---NDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
              SPD VTYNT++DA CK G + +A  ++  M  +GL  N  T N +++  C    L E
Sbjct: 237 YNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  ++   ++     D  +Y  LI G   + +   A KL DEM+  +++P   +YN +I 
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  +  K  +A  +L E+ + G+ P+  T N ++  +C EG+++ A     KM E  F P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT N L++G C+ G + +A +       K   +DSVT NT++ +LC+E++LE+A+ LL
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           S   ++    D  +Y  +     + G ++ A K    M E                 +EI
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE-----------------KEI 519

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            PS+++Y+  I   C  G+ + A+    E  + G+  +++TY  +++G   R   + KA
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC-REGDVEKA 577


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/542 (68%), Positives = 447/542 (82%), Gaps = 6/542 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  + C PDNVTYNTILD L KKG+L + RDLL DMK +GL+PNR TYNILV GYCK+GW
Sbjct: 234 MGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA  V++LMTQN  LPDVWTYNMLING CN G +EEAF+LR EME+LKLLPDVV+YNT
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   E  +  EAFKL++E+ E G+KPNAVTHNIM+KWYCKEGK+D A   +  MEE+G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSPDCVTYNTLI+  CKAGNM EAFR MD MGRK +KM+++TLNTIL TLC EKKL+EAY
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+SA KRGY++DEVSYGTLI GYF+D   +RALKLWDEMKE++I+PST TYN +I GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GKTEQAI  LNELL+SG++PDETT+NTI+HG+C EG VEKA QFHNKMVE SFKPD+
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            TCNILL GLC EG+LEKALK F +W+ KGKA+D+VTYNTLI+SLCKE RL+DAF LLSE
Sbjct: 594 FTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT------ 474
           MEEK+LGPD YTY AI TAL +SGR+ EA++F S M+E G +  QV+Q + ++T      
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSET 713

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            EE D SS++YSE I E C++G+YKDA++IF E++QKGI ++KSTY+NLM+GLIKRRKSI
Sbjct: 714 SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSI 773

Query: 535 SK 536
           SK
Sbjct: 774 SK 775



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 243/479 (50%), Gaps = 32/479 (6%)

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++ L + +K+L D       I  +  +G    AF++ K+M+ L+L P+++T NTL+N 
Sbjct: 125 LSILRLTSPSKALLDT-----AIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS 179

Query: 125 F--FESGRSM----EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
              + S  S+    EAF   ++  + GI PN  T NI+I  YC E K   A + +  M +
Sbjct: 180 LVRYPSSHSVSFSREAF---NDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK 236

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
              SPD VTYNT++D  CK G + +A  ++  M  +GL  N  T N +++  C    L E
Sbjct: 237 YNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  ++   ++     D  +Y  LI G   + +   A KL DEM+  +++P   +YN +I 
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  +  K  +A  +L E+ + G+ P+  T N ++  +C EG+++ A     KM E  F P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT N L++G C+ G + +A +       K   +DSVT NT++ +LC+E++LE+A+ LL
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           S   ++    D  +Y  +     + G ++ A K    M E                 +EI
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE-----------------KEI 519

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            PS+++Y+  I   C  G+ + A+    E  + G+  +++TY  +++G   R   + KA
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC-REGDVEKA 577


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/543 (66%), Positives = 449/543 (82%), Gaps = 6/543 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F C PDNV+YNTILD L KKGKLNE RDLL DMK  GL+PNR T+NILVSGYCKLGW
Sbjct: 238 MKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGW 297

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA +V+DLM QN  LPDVWTYNMLI G C  G ++EAFRL+ EME+LKLLPDVVTYNT
Sbjct: 298 LKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNT 357

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN  F+   S++ F+LID+++  G+KPNAVT+N+++KWY KEGK+D A   +R MEE+G
Sbjct: 358 LINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG 417

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSPDCVT+NTLI+  CKAG + EAFRMMD M RKGLKMN++TLNTILHTLC E+KLD+AY
Sbjct: 418 FSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY 477

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+SASKRGY++DEVSYGTLI GYF+D K+  A+KLWDEMKE++I+PS  TYN MI GL
Sbjct: 478 KLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGL 537

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SGKT+Q+ID LNELL+SG++PDETT+NTII G+C EGQVEKA QFHNKMV+KSFKPD+
Sbjct: 538 CHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDL 597

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            TCNILL GLC EG+L+KALK F +WI KGKA+D+VTYNT+IS LCKE R E+AF LL+E
Sbjct: 598 FTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAE 657

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------T 474
           MEEKKLGPD YTY AI +AL ++GR++EA++F S +VE GK+  Q +  N  K      T
Sbjct: 658 MEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSET 717

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            +E DP+S+++SE+INE C+QG+YKDA+ + +E+ QKGI ++KSTY++LM GLIKRRKSI
Sbjct: 718 SQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSI 777

Query: 535 SKA 537
           S++
Sbjct: 778 SRS 780



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 24/210 (11%)

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR-----EGILEKALKF 382
            +T I  + +  +   A Q  N+M     KP+++TCN L++ L R        L KA+  
Sbjct: 142 LDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI-- 199

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   I  G  V++ T+N LI   C E +L +A GL+ +M++    PD  +Y  I   L +
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G+L EA+     M   G +                 P+  +++  ++ +C  G  K+A 
Sbjct: 260 KGKLNEARDLLLDMKNNGLL-----------------PNRNTFNILVSGYCKLGWLKEAA 302

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Q+ +   Q  +  +  TY  L+ GL K  K
Sbjct: 303 QVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/543 (62%), Positives = 426/543 (78%), Gaps = 6/543 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FGC+PD V+YNTILDAL K+  L E RDLL DMK +GL PN+ TYN+LV GYC+LG 
Sbjct: 239 MSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGL 298

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA +V+++MT+N  LP VWTYNML+NG+CN G ++EAFR+R EME + +LPDVVTYNT
Sbjct: 299 LKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNT 358

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +   S E + LI+E+D+ G+K NAVT+NI++KW CK+G + +A   +  MEENG
Sbjct: 359 LIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENG 418

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPDCVTYNTLI A CKAG M +AFRMMD M  KGLK++T TLNTILH LC EKKLDEAY
Sbjct: 419 LSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAY 478

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL SASKRGY LDEVSYG LI GYF+DEK +RAL LWDEMKERQIMPST TYN++I GL
Sbjct: 479 NLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGL 538

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            QS K +QAID LNE+L++G++PDETT+N IIHGFC EG VEKA QFHN+M+E  FKPD+
Sbjct: 539 CQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDV 598

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            TCNILL GLCREG+LEKALK F + + KGK +D VTYNT+ISSLCKE + E+A+ LL+E
Sbjct: 599 YTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTE 658

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN------TSKT 474
           ME KKLGPD+YTY  I  AL ++GR++EA++FT  MVE+G ++ Q ++        TS+ 
Sbjct: 659 MEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEV 718

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            E  D  SI+YS++INE C+Q +YKDA+ +F E  ++G+A+NK TY+NLM GLIKRRKS 
Sbjct: 719 SEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKST 778

Query: 535 SKA 537
           SKA
Sbjct: 779 SKA 781



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 55/249 (22%)

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE--------- 373
           P +   +T I  +    Q   A Q  NKM   +++P+++TCN L++ L R          
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLA 197

Query: 374 ----------GI---------------LEKALKFFRSWILK----GKAVDSVTYNTLISS 404
                     G+               LE  +K    W+ K    G   D+V+YNT++ +
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           L K R L++A  LL +M+ K L P+++TY  +       G L+EA K   IM        
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIM-------- 309

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                    T   + P+  +Y+  +N  C+ G+  +A +I +E  +  +  +  TY  L+
Sbjct: 310 ---------TRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLI 360

Query: 525 NGLIKRRKS 533
           +G  + R S
Sbjct: 361 DGCSQWRDS 369


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/536 (63%), Positives = 427/536 (79%), Gaps = 10/536 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F C PDNV+YNTILD L KKGKLNE RDLL DMK  GL PNR T+NILVSGYCKLGW
Sbjct: 74  MKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGW 133

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA  V+D+M +N  LPDV TY  LI G C  G ++EAFRLR EME+LKLLP VVTYN 
Sbjct: 134 LKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNM 193

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN  FE   S++ F+LIDE++  G+KPNAVT+N+++KWY KEGK+D A   +R MEE+G
Sbjct: 194 LINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG 253

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSPDCVT+NTL +  CKAG + EAFRMMD M RKGLKMN++TLNTILHTLC E+KLD+AY
Sbjct: 254 FSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY 313

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+SASKRGY++DEVSYGTLI GYF+  K+      WDEMKE++I+PS  TY  MI GL
Sbjct: 314 KLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXX----WDEMKEKEIIPSIITYGTMIGGL 369

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SGKT+Q+ID  NELL+SG++PD+TT+NTII G+C EGQV+KA  F NKMV+KSFKPD+
Sbjct: 370 CRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDL 429

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            TCNIL+ GLC EG+L+KALK F++WI KGKA+D+VT+NT+IS LC+E R E+AF LL+E
Sbjct: 430 FTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAE 489

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------T 474
           MEEKKLGPD YT+ AI +AL ++GR++EA++F S +VE GK+  Q +  N  K      T
Sbjct: 490 MEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSET 549

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +E DP+S+++SE+INE C+QG+YKDA+ + +E+ QKGI ++KSTY++LM GLIKR
Sbjct: 550 SQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 226/474 (47%), Gaps = 52/474 (10%)

Query: 106 MESLKLLPDVVTYNTLINRF--FESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCK 162
           M+ L L P+++T NTLI     + S  S+   K I  ++ + G++ N  T NI+I   C 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           E K+ +A  ++  M+     PD V+YNT++D  CK G + EA  ++  M   GL  N  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            N ++   C    L EA  +++  ++     D  +Y TLI G  +D K + A +L DEM+
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
             +++P   TYN +I G  +   + +  ++++E+   G+ P+  T+N ++  +  EG+++
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A     KM E  F PD VT N L +G C+ G L +A +       KG  ++SVT NT++
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 403 SSLCKERRLEDAFGLLS-------------------------------EMEEKKLGPDRY 431
            +LC ER+L+DA+ LLS                               EM+EK++ P   
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSII 360

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV------------------QPNTSK 473
           TY  +   L  SG+ +++    + ++E+G +  Q                          
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             +   P   + +  +   C++G    AL++F+    KG AI+  T+  +++GL
Sbjct: 421 VKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGL 474



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 22/326 (6%)

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYM---LLNSASKRGYYLDEVSYGTLITGYFR 267
           M R  LK N +TLNT++  L         Y+   + +   K G  ++  ++  LI G   
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + K + A+ L  +MK     P   +YN ++  L + GK  +A D+L ++  +G+ P+  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           FN ++ G+C  G +++A +  + M   +  PD+ T   L+ GLC++G +++A +  R  +
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRL-RDEM 179

Query: 388 LKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
              K +  V TYN LI+   +       F L+ EME K + P+  TY  +    V+ G++
Sbjct: 180 ENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKM 239

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           + A      M E+G                   P  ++++   N +C  GR  +A ++ +
Sbjct: 240 DNAGNELRKMEESG-----------------FSPDCVTFNTLSNGYCKAGRLSEAFRMMD 282

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
           E  +KG+ +N  T   +++ L   RK
Sbjct: 283 EMSRKGLKMNSVTLNTILHTLCGERK 308


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/535 (61%), Positives = 406/535 (75%), Gaps = 6/535 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PDNVTYNT+L AL K+ +L +VRDLL  MK  GL PNR TYNILV GYCKL W
Sbjct: 237 MGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKW 296

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA  V++LMT    LPDVWTYN ++ G C+ G ++EA RLR +MES KL+PDVVTYNT
Sbjct: 297 LKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNT 356

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  FE   S  AFKL++E+   G+K N VTHNIMIKW+C EGKID+A  ++  M E+G
Sbjct: 357 LIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESG 416

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSPDC TYNT+I+  CKAG M EA++MMD MGRKGLK++T TLNT+LHT+C EK+LD+AY
Sbjct: 417 FSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAY 476

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L   A KRGY LDEV+YGTLI GYF+DE+A+RALKLW+EMKE  I+ +  TYN +I GL
Sbjct: 477 TLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGL 536

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SGKT+QA+D LNELL+ G++PDE+T N IIHG+C EG VEKA QFHNKMVE S KPDI
Sbjct: 537 CLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDI 596

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            TCNILL GLCREG+LEK L  F +WI KGK +D+VTYN +ISS CKERRLEDAF L++E
Sbjct: 597 FTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTE 656

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           ME K L PDRYTY AI T L ++GR EEA+K      E G+      Q  T  T  E+  
Sbjct: 657 MEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQ------QVKTQDTSPELGT 710

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           S + YSE+I+  C+QG+YKDA+++F++  QKG+++NK TY+ LM+GL+KRRKS +
Sbjct: 711 SDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFT 765



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 183/429 (42%), Gaps = 90/429 (20%)

Query: 171 KIVRNMEENGFSPDCVTYNTLIDA------------------------------------ 194
           +I   M+   F P+ +T NTL++A                                    
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 195 --NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C   N EEA R+++ MG  G   + +T NT+L  LC   +L +   LL      G +
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +  +Y  L+ GY + +    A ++ + M  + ++P  +TYN M+ GL   GK ++A+ +
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 313 LNELLQSGMIPDETTFNTIIHG-----------------------------------FCS 337
            +++    ++PD  T+NT+I G                                   FC+
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           EG++++A     KMVE  F PD  T N +++G C+ G + +A K       KG  +D+ T
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
            NTL+ ++C E++L+DA+ L  +  ++    D  TY  +     +  + + A K    M 
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           ETG                 I  + I+Y+  I   C  G+   A+    E  +KG+  ++
Sbjct: 519 ETG-----------------IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE 561

Query: 518 STYMNLMNG 526
           ST   +++G
Sbjct: 562 STSNIIIHG 570



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 21/227 (9%)

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            LL+S     +   +T +  +    Q     Q  NKM    F+P+++TCN LL+ L R  
Sbjct: 128 HLLRSDHTIPKPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSN 187

Query: 375 ---ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
               L  + + F+  +  G   +  T+N LI   C +   E+A  L+++M E    PD  
Sbjct: 188 SSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNV 247

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  + TAL +  +L + +     M  +G                 + P+  +Y+  ++ 
Sbjct: 248 TYNTVLTALCKRSQLTQVRDLLLQMKNSG-----------------LFPNRNTYNILVHG 290

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +C     K+A ++ E    KG+  +  TY  ++ GL    K I +AV
Sbjct: 291 YCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK-IDEAV 336


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/506 (64%), Positives = 407/506 (80%), Gaps = 6/506 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PDN+TYNTILD L KKG+LNE RDLL DMK +GL PNRTT+NILV G C+LGW
Sbjct: 223 MRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGW 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA  V++LM+QN  +PD WTYN++I+G+C  G + EA RLR+EME+LKL PDVVTYNT
Sbjct: 283 LKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNT 342

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN  FE G S E FKLI+E++  G+KPN+VT+N+M+KW+ K+GK+D+  K VR MEE+G
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTLI  +CK G M+EAFR+MD MGRKGLKM+ +TLNT+L  LC E+KLDEA+
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL SA +RGY++DEVSYGTLI GYF+ EKA++AL+LWDEMKE++I+PS  TYN+MI GL
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GKT QAID L+ELL+SG++PDE T+NTIIHG+C EGQVEKA QFHNKMVEK+FKPD+
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VTCN LL GLC+EG+LEKALK F +WI KGK VD+V+YNT+I SLCKE+R  +AF LL E
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEE 642

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ------PNTSKT 474
           MEEKKLGPD YTY AI   L ++GR+++A++F S + E GK  +Q ++        TS+ 
Sbjct: 643 MEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEI 702

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKD 500
           P+E  P++I+YS KINE CSQGRYKD
Sbjct: 703 PQEPHPNAIAYSNKINELCSQGRYKD 728



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 239/511 (46%), Gaps = 59/511 (11%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV-----VDLMTQNKSLP 78
           G+ ++   + + MK+ G+ P   T N L++   +      ++R+      D +     + 
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPS-SHSIRLSKAVFTDFIKIGVKI- 195

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           +  ++N+LI+G C      EA R+  +M      PD +TYNT+++   + GR  EA  L+
Sbjct: 196 NTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLL 255

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++   G+ PN  T NI++   C+ G + +A  ++  M +N   PD  TYN +I   CK 
Sbjct: 256 LDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQ 315

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G + EA R+ + M  + LK++                                  D V+Y
Sbjct: 316 GRIAEAMRLREEM--ENLKLSP---------------------------------DVVTY 340

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TLI G F    +    KL +EM+ R + P++ TYN M+    + GK ++    + ++ +
Sbjct: 341 NTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEE 400

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           SG +PD  T+NT+I   C  G++++A +  ++M  K  K D VT N +L  LCRE  L++
Sbjct: 401 SGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDE 460

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A     S   +G  VD V+Y TLI    K  +   A  L  EM+EK++ P   TY ++  
Sbjct: 461 AHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIA 520

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L + G+  +A      ++E+G +                 P  I+Y+  I+ +C +G+ 
Sbjct: 521 GLCQMGKTNQAIDKLDELLESGLV-----------------PDEITYNTIIHGYCQEGQV 563

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + A Q   +  +K    +  T   L+ GL K
Sbjct: 564 EKAFQFHNKMVEKNFKPDVVTCNTLLCGLCK 594



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 168/344 (48%), Gaps = 20/344 (5%)

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC---CEKKLDEAYMLLNSASK 248
           I A    G   +A ++ + M R G++   +T NT+L+ L        +  +  +     K
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G  ++  S+  LI G   + +   A+++  +M++    P   TYN ++ GL + G+  +
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A D+L ++   G+ P+ TTFN ++ G C  G +++A      M + S  PD  T N+++S
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G C++G + +A++          + D VTYNTLI+   +    E+ F L+ EME + + P
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY  +    V+ G+++E  K    M E+G +                 P  ++Y+  
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL-----------------PDIVTYNTL 413

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+ HC  G+  +A ++ +E  +KG+ ++  T   ++  L + RK
Sbjct: 414 ISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK 457



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 20/233 (8%)

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHG---FCSEGQVEKALQFHNKMVEKSFKPDI 360
           G+  QA  + N + + GM P   T NT+++    F S   +  +       ++   K + 
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINT 197

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + NIL+ G C E    +A++        G   D++TYNT++  LCK+ RL +A  LL +
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+ K L P+R T+  +       G L+EA     +M +   +                 P
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVV-----------------P 300

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            + +Y+  I+  C QGR  +A+++ EE     ++ +  TY  L+NG  +   S
Sbjct: 301 DAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSS 353


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 274/557 (49%), Positives = 386/557 (69%), Gaps = 19/557 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GFG  PD VTYNT+L+A  +KG L E R LL+ MKK G+ P R TYN LVS Y +LGW
Sbjct: 230 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGW 289

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYN 119
           +K+A +VV+ MT N   PD+WTYN+L  G C AG ++EAFRL+ EME L  LLPDVVTYN
Sbjct: 290 IKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYN 349

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL +  F+   S +A +L++E+ E G+K   VTHNI+IK  CK+G+++ A   +  M ++
Sbjct: 350 TLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD 409

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD +TYNTLI A+CKAGN+ +A+ +MD M R+GLK++T TLNT+L+ LC EK+ +EA
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL S  +RG+  DEVSYGT++  YF++  +  AL+LWDEM E+++ PS  TYN +I G
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKG 529

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS+ G+ ++AID LNEL++ G++PD+TT+N IIH +C EG +E A QFHNKMVE SFKPD
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPD 589

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VTCN L++GLC  G L+KALK F SW+ KGK VD +TYNTLI ++CK+  ++ A    +
Sbjct: 590 VVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFA 649

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP---------- 469
           +ME + L PD +TY  + +AL E+GR EEAQ     + E+G ++     P          
Sbjct: 650 DMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEA 709

Query: 470 ---NTSKTPEEI-----DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                +KT EE      D +S +Y++ +N  C+ G++K+A  I +E  QKG++++ STY+
Sbjct: 710 ESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYI 769

Query: 522 NLMNGLIKRRKSISKAV 538
            LM GL+KR+K ++ AV
Sbjct: 770 TLMEGLVKRQKRLTHAV 786



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 230/486 (47%), Gaps = 53/486 (10%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+ +T+N+L++  C+ G L +A      M+   L PD VTYNTL+N     G   EA  L
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +  + + G+ P   T+N ++  Y + G I +A K+V  M  NGF PD  TYN L    C+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 198 AGNMEEAFRMMDVMGR------------------------------------KGLKMNTI 221
           AG ++EAFR+ D M R                                    KG+K   +
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N ++  LC + +L+ A   LN  +  G   D ++Y TLI  + +     +A  L DEM
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
             R +   TFT N +++ L +  + E+A  +L    Q G +PDE ++ T++  +  E   
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E AL+  ++M+EK   P I T N L+ GL R G L++A+      + KG   D  TYN +
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I + CKE  LE+AF   ++M E    PD  T   +   L  +G+L++A K     VE GK
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                          ++D   I+Y+  I   C  G    AL  F +   +G+  +  TY 
Sbjct: 622 ---------------KVD--VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664

Query: 522 NLMNGL 527
            +++ L
Sbjct: 665 VVLSAL 670



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 21/272 (7%)

Query: 262 ITGYFRDEKANRALKLWDEMKER-QIMPSTFTYNAMIWGLSQSGKT--EQAIDMLNELLQ 318
           ++ Y R    + A +L   ++ R ++ PS    NA++  L++S  T  + ++D    ++ 
Sbjct: 138 LSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVA 197

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
             + P+  TFN ++H  CS+G +  AL   + M      PD VT N LL+  CR+G+L +
Sbjct: 198 LRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 257

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A          G A    TYNTL+S+  +   ++ A  ++  M      PD +TY  +  
Sbjct: 258 ARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAA 317

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR- 497
            L ++G+++EA +    M   G +   VV  NT                 + + C + R 
Sbjct: 318 GLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNT-----------------LADACFKCRC 360

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             DAL++ EE R+KG+     T+  ++ GL K
Sbjct: 361 SSDALRLLEEMREKGVKATLVTHNIVIKGLCK 392


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 281/504 (55%), Positives = 377/504 (74%), Gaps = 8/504 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           F   PDNVTYNTIL A+ KKG+L++V+DLL DMK+ GLVPNR TYN LV GYCKLG LKE
Sbjct: 234 FNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKE 293

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A ++V+LM Q   LPD+ TYN+LING CNAG + E   L   M+SLKL PDVVTYNTLI+
Sbjct: 294 AFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLID 353

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFS 182
             FE G S+EA KL+++++  G+KPN VTHNI +KW CKE K ++  + V+ + E +GFS
Sbjct: 354 GCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFS 413

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTY+TLI A  K G++  A  MM  MG+KG+KMNTITLNTIL  LC E+K+DEA+ L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNL 473

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+SA KRGY +DEV+YGTLI GYFR+EK  +A ++WDEMK  +I P+  T+N++I GL  
Sbjct: 474 LDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCH 533

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GKTE A++  +EL +SG++PD+ TFN+II G+C EG+VEKA +F+N+ ++ SFKPD  T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           CNILL+GLC+EG+ EKAL FF + I + + VD+VTYNT+IS+ CK+++L++A+ LLSEME
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQ--PNTSKTPE 476
           EK+L PDR+TY +I T+L+E G+L EA    +KF+       +  H   +  P TS++ E
Sbjct: 653 EKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKE 712

Query: 477 EIDPSSISYSEKINEHCSQGRYKD 500
           E+   +I+YS+ INE CS+GR K+
Sbjct: 713 ELKTEAIAYSDVINELCSRGRLKE 736



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 246/492 (50%), Gaps = 22/492 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING---WCNAGMLEEA 99
           P++  ++I +S Y   G    A++V   M + K  P++ T N L+ G   + ++  +  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIK 158
             +  +M  + +  DV T+N L+N +   G+  +A  +++ +  E  + P+ VT+N ++K
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
              K+G++     ++ +M+ NG  P+ VTYN L+   CK G+++EAF+++++M +  +  
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           +  T N +++ +C    + E   L++         D V+Y TLI G F    +  A KL 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ-SGMIPDETTFNTIIHGFCS 337
           ++M+   + P+  T+N  +  L +  K E+    + EL++  G  PD  T++T+I  +  
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G +  AL+   +M +K  K + +T N +L  LC+E  +++A     S   +G  VD VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y TLI    +E ++E AF +  EM+  K+ P   T+ ++   L   G+ E A +    + 
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           E+G +                 P   +++  I  +C +GR + A + + E+ +     + 
Sbjct: 549 ESGLL-----------------PDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591

Query: 518 STYMNLMNGLIK 529
            T   L+NGL K
Sbjct: 592 YTCNILLNGLCK 603



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 176/343 (51%), Gaps = 15/343 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M GF   PD VTY+T++ A  K G L+   +++ +M ++G+  N  T N ++   CK   
Sbjct: 409 MHGFS--PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  ++D   +   + D  TY  LI G+     +E+AF +  EM+ +K+ P V T+N+
Sbjct: 467 VDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNS 526

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G++  A +  DEL E G+ P+  T N +I  YCKEG+++KA +      ++ 
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHS 586

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD  T N L++  CK G  E+A    + +  +  +++T+T NT++   C +KKL EAY
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAY 645

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   ++    D  +Y ++IT    D K + A +L  +   +        + +M   L
Sbjct: 646 DLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK--------FGSMKRNL 697

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
               +   A     E L++  I     ++ +I+  CS G++++
Sbjct: 698 HLETEKNPATSESKEELKTEAI----AYSDVINELCSRGRLKE 736


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 280/558 (50%), Positives = 384/558 (68%), Gaps = 20/558 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GFG  PD VTYNT+L+A  +KG L E R LL+ MKK+G+VP R TYN LVS Y +LGW
Sbjct: 235 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGW 294

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYN 119
           +K+A  VV+ MT     PD+WTYN+L  G C AG ++EAF+L+ EME L ++ PDVVTYN
Sbjct: 295 IKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYN 354

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++  F+  RS +A  L++E+ E G+K + VTHNI++K  C+EG++++A   +  M E 
Sbjct: 355 TLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEE 414

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD +TYNTLIDA+CKAGN+ +AF +MD M R GLKM+T TLNT+L+ LC EK+ +EA
Sbjct: 415 GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL +  +RG+  DEVSYGT++  YF++ K   AL LWDEM +R++ PS  TYN +I G
Sbjct: 475 EELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKG 534

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS  GK  +AID LNEL++ G++PD+TT+N IIH +C EG +EKA QFHNKMVE SFKPD
Sbjct: 535 LSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPD 594

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VTCN L++GLC  G LEKA+K F SW+ KGK VD +TYNTLI +LCK+  ++ A    +
Sbjct: 595 VVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFA 654

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN--------- 470
           +ME + L PD +TY  + +AL E+GR  EAQK    + E+GK+  +   P+         
Sbjct: 655 DMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVE 714

Query: 471 TSKTPE-EIDPSSI---------SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           T K PE + D  S+         SY++ I E C  G+ K+A  + +E  QKG++++ STY
Sbjct: 715 TGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTY 774

Query: 521 MNLMNGLIKRRKSISKAV 538
           + LM GLIKR+K  + A 
Sbjct: 775 ITLMEGLIKRQKRQTHAA 792


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 272/558 (48%), Positives = 377/558 (67%), Gaps = 20/558 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GFG  PD VTYNT+L A  +KG L E R LL+ MKK+G+ P R TYN LVS Y +LGW
Sbjct: 236 MQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGW 295

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYN 119
           +K+A  VV+ MT     PD+WTYN+L  G C AG ++EAF+L+ EME L ++ PDVVTYN
Sbjct: 296 IKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYN 355

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++  F+  RS +A  L++E+ + G+K + VTHNI++K  C+EG++++A   ++ M E 
Sbjct: 356 TLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEE 415

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD +TYNTLIDA CKA N+ +AF +MD M R GLKM+T TLNT+L+ LC EK+ +EA
Sbjct: 416 GLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL S  +RG+  DEVSYGT++  YF++ K   AL LWDEM +R++ PS +TYN +I G
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKG 535

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L   GK  +AID LNEL++ G++PD+TT+N IIH +C EG +EKA QFHNKM+E  FKPD
Sbjct: 536 LCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPD 595

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VTCN L++GLC  G LEKA+K F SW  KGK VD +TYNTLI +LCK+  ++ A    +
Sbjct: 596 VVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFA 655

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI- 478
           +ME + L PD +TY  + +AL E+GR EEAQ     + E+GK++ +   P    + EE+ 
Sbjct: 656 DMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVK 715

Query: 479 ---DP---------------SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
              DP                  SY++ + E C  G+ K+A  + +E  QKG++++ STY
Sbjct: 716 TGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTY 775

Query: 521 MNLMNGLIKRRKSISKAV 538
           + LM GLIKR+K  + A 
Sbjct: 776 ITLMEGLIKRQKRQTHAA 793


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/461 (59%), Positives = 351/461 (76%), Gaps = 8/461 (1%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           DVWTYN L+ G C+ G ++EA R+R EMESLKL+PDVVTYNTLI+  F+   S E F+L+
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 139 DELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +E+   G ++PNAVTHNIM+KW+ KEGKI++A   V  M E+G SPDC TYNT+I+  CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           AG + EAFRMMD M RKGLK +  TLNT+LHTLC EKK +EAY L   A KRGY LDEV+
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           YGTLI GYF+ ++ ++ALKLW+EMK+R I+PS  +YN +I GL  SGKT+QA+D LNELL
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G++PDE + N IIHG+C EG V+KA QFHNKMV  SFKPDI T NILL GLCR  +LE
Sbjct: 376 EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLE 435

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           KA K F SWI K  +VD VTYNT+IS LCKE RL++AF L+++ME KK  PD+YTY AI 
Sbjct: 436 KAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIV 495

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS-ISYSEKINEHCSQG 496
            AL  +GR EEA+KF S + ETG    Q V+  T  T +E+D SS I YS++I++ C+QG
Sbjct: 496 RALTHAGRTEEAEKFMSKLSETG----QAVK--THDTSQELDASSDIMYSQQISDLCTQG 549

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +YK+A+++F+E+ QKG+++NK TY+ LM+G +KRRKSISK 
Sbjct: 550 KYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISKV 590



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 215/424 (50%), Gaps = 15/424 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLG 59
           ME    +PD VTYNT++D  FK     E   LL +MK +G V PN  T+NI+V  + K G
Sbjct: 163 MESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEG 222

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            + EA   V  M ++   PD +TYN +ING+C AG L EAFR+  EM    L PD+ T N
Sbjct: 223 KINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLN 282

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+++      +  EA++L  +  + G   + VT+  +I  Y K  + DKA K+   M++ 
Sbjct: 283 TMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKR 342

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  V+YN LI   C +G  ++A   ++ +  KGL  + ++ N I+H  C E  +D+A
Sbjct: 343 GIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKA 402

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           +   N      +  D  +   L+ G  R +   +A KL++    +Q      TYN MI  
Sbjct: 403 FQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISY 462

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS---- 355
           L + G+ ++A D++ ++      PD+ T+N I+      G+ E+A +F +K+ E      
Sbjct: 463 LCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVK 522

Query: 356 ---------FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
                       DI+     +S LC +G  ++A+K F+    KG +++  TY  L+    
Sbjct: 523 THDTSQELDASSDIMYSQ-QISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFL 581

Query: 407 KERR 410
           K R+
Sbjct: 582 KRRK 585



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 222/438 (50%), Gaps = 13/438 (2%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TYNT++  L  +GK++E   +  +M+   L+P+  TYN L+ G  K     E  R++
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 69  DLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + M     + P+  T+N+++  +   G + EA     +M    + PD  TYNT+IN F +
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  EAF+++DE+   G+KP+  T N M+   C E K ++A ++     + G+  D VT
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLI    K    ++A ++ + M ++G+  + ++ N ++  LC   K D+A   LN   
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   DEVS   +I GY  +   ++A +  ++M      P  FT N ++ GL +    E
Sbjct: 376 EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLE 435

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  + N  +      D  T+NT+I   C EG++++A      M  K F+PD  T N ++
Sbjct: 436 KAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIV 495

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDS------------VTYNTLISSLCKERRLEDAF 415
             L   G  E+A KF       G+AV +            + Y+  IS LC + + ++A 
Sbjct: 496 RALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAM 555

Query: 416 GLLSEMEEKKLGPDRYTY 433
            L  E E+K +  ++YTY
Sbjct: 556 KLFQESEQKGVSLNKYTY 573



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 181/392 (46%), Gaps = 82/392 (20%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VT+N ++    K+GK+NE  D +  M + G+ P+  TYN +++G+CK G L EA
Sbjct: 203 GVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEA 262

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL---------------------- 102
            R++D M +    PD+ T N +++  C     EEA+ L                      
Sbjct: 263 FRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMG 322

Query: 103 ----RKEMESLKL---------LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
               ++E ++LKL         +P VV+YN LI     SG++ +A   ++EL E G+ P+
Sbjct: 323 YFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPD 382

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            V+ NI+I  YC EG +DKA +    M  N F PD  T N L+   C+   +E+AF++ +
Sbjct: 383 EVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFN 442

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI---TGYF 266
               K   ++ +T NT++  LC E +LDEA+ L+     + +  D+ +Y  ++   T   
Sbjct: 443 SWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAG 502

Query: 267 RDEKANR--------------------------------------------ALKLWDEMK 282
           R E+A +                                            A+KL+ E +
Sbjct: 503 RTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESE 562

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
           ++ +  + +TY  ++ G  +  K+   +D  N
Sbjct: 563 QKGVSLNKYTYIKLMDGFLKRRKSISKVDHAN 594



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 19/365 (5%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           S D  TYNTL+   C  G ++EA R+ D M    L  + +T NT++      +   E + 
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 242 LLNSASKR-GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           LL     R G   + V++  ++  + ++ K N A     +M E  + P  FTYN MI G 
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK  +A  M++E+ + G+ PD  T NT++H  C E + E+A +   K  ++ +  D 
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDE 313

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L+ G  +    +KALK +     +G     V+YN LI  LC   + + A   L+E
Sbjct: 314 VTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNE 373

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG------------------KI 462
           + EK L PD  +   I       G +++A +F + MV                      +
Sbjct: 374 LLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDM 433

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
             +  +   S   ++     ++Y+  I+  C +GR  +A  +  +   K    ++ TY  
Sbjct: 434 LEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNA 493

Query: 523 LMNGL 527
           ++  L
Sbjct: 494 IVRAL 498



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 21/161 (13%)

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL------VESGR 445
           ++D  TYNTL+  LC E ++++A  +  EME  KL PD  TY  +           E  R
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 446 LEEAQK----------FTSIMV----ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           L E  K            +IMV    + GKIN +            + P   +Y+  IN 
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKIN-EASDAVVKMVESGVSPDCFTYNTMING 252

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C  G+  +A ++ +E  +KG+  +  T   +++ L   +K
Sbjct: 253 FCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKK 293


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 278/510 (54%), Positives = 377/510 (73%), Gaps = 20/510 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           F   PDNVTYNTIL A+ KKG+L+++++LL DMKK GLVPNR TYN LV GYCKLG LKE
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A ++V+LM Q   LPD+ TYN+LING CNAG + E   L   M+SLKL PDVVTYNTLI+
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFS 182
             FE G S+EA KL+++++  G+K N VTHNI +KW CKE K +   + V+ + + +GFS
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTY+TLI A  K G++  A  MM  MG+KG+KMNTITLNTIL  LC E+KLDEA+ L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           LNSA KRG+ +DEV+YGTLI G+FR+EK  +AL++WDEMK+ +I P+  T+N++I GL  
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GKTE A++  +EL +SG++PD++TFN+II G+C EG+VEKA +F+N+ ++ SFKPD  T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           CNILL+GLC+EG+ EKAL FF + I + + VD+VTYNT+IS+ CK+++L++A+ LLSEME
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLI-EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA----QKFTS--------IMVETGKINHQVVQPN 470
           EK L PDR+TY +  + L+E G+L E     +KF+         + VET K       P 
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEK------NPA 706

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
           TS++ EE++  +I+YS+ I+E CS+GR K+
Sbjct: 707 TSESKEELNTEAIAYSDVIDELCSRGRLKE 736



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/530 (30%), Positives = 275/530 (51%), Gaps = 23/530 (4%)

Query: 8   PDNVTYNTILDALFK---KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           P+ +T NT+L  L +      ++  R++  DM K G+  N  T+N+LV+GYC  G L++A
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223

Query: 65  MRVVDLM-TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           + +++ M ++ K  PD  TYN ++      G L +   L  +M+   L+P+ VTYN L+ 
Sbjct: 224 LGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + G   EAF++++ + +  + P+  T+NI+I   C  G + +  +++  M+     P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTYNTLID   + G   EA ++M+ M   G+K N +T N  L  LC E+K +     +
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403

Query: 244 NS-ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                  G+  D V+Y TLI  Y +    + AL++  EM ++ I  +T T N ++  L +
Sbjct: 404 KELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             K ++A ++LN   + G I DE T+ T+I GF  E +VEKAL+  ++M +    P + T
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ GLC  G  E A++ F      G   D  T+N++I   CKE R+E AF   +E  
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +    PD YT   +   L + G  E+A  F + ++E  +++                  +
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD------------------T 625

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++Y+  I+  C   + K+A  +  E  +KG+  ++ TY + ++ L++  K
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 227/457 (49%), Gaps = 22/457 (4%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL---INRFFESGRSMEA 134
           P    +++ ++ + + G    A ++ ++M  LKL P+++T NTL   + R+  S     A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLID 193
            ++ D++ + G+  N  T N+++  YC EGK++ A  ++  M  E   +PD VTYNT++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A  K G + +   ++  M + GL  N +T N +++  C    L EA+ ++    +     
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D  +Y  LI G          L+L D MK  ++ P   TYN +I G  + G + +A  ++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPDIVTCNILLSGLCR 372
            ++   G+  ++ T N  +   C E + E   +   ++V+   F PDIVT + L+    +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G L  AL+  R    KG  ++++T NT++ +LCKER+L++A  LL+   ++    D  T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y    T ++   R E+ +K   +  E  K+              +I P+  +++  I   
Sbjct: 489 YG---TLIMGFFREEKVEKALEMWDEMKKV--------------KITPTVSTFNSLIGGL 531

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           C  G+ + A++ F+E  + G+  + ST+ +++ G  K
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 146/270 (54%), Gaps = 3/270 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M GF   PD VTY+T++ A  K G L+   +++ +M ++G+  N  T N ++   CK   
Sbjct: 409 MHGFS--PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +++   +   + D  TY  LI G+     +E+A  +  EM+ +K+ P V T+N+
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G++  A +  DEL E G+ P+  T N +I  YCKEG+++KA +      ++ 
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD  T N L++  CK G  E+A    + +  +  +++T+T NT++   C +KKL EAY
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAY 645

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            LL+   ++G   D  +Y + I+    D K
Sbjct: 646 DLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 25/230 (10%)

Query: 306 TEQAIDMLNELLQSGM----IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++ ++ + N LL   +     P +  F+  +  +  EG+   ALQ   KM+    KP+++
Sbjct: 108 SDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLL 167

Query: 362 TCNILLSGLCR---EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           TCN LL GL R      +  A + F   +  G +++  T+N L++  C E +LEDA G+L
Sbjct: 168 TCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGML 227

Query: 419 SEM-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             M  E K+ PD  TY  I  A+ + GRL + ++    M + G +               
Sbjct: 228 ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV--------------- 272

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             P+ ++Y+  +  +C  G  K+A QI E  +Q  +  +  TY  L+NGL
Sbjct: 273 --PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/558 (47%), Positives = 373/558 (66%), Gaps = 20/558 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GFG  PD VTYNT+L+A  +KG L E R LL+ MK+ G+ P + TYN LVS + +LGW
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYN 119
           +K+A +VV+ MT     PD+ TYN+L  G C AG ++EAFRL+ EME L   LPDVVTYN
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYN 353

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++  F+   S +A +L++E+ + G+KP  VTHNI++K  CKEGK+++A   +  + E 
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD +TYNTLIDA CKAGN+ +AF +MD M  KGLKM+T TLNT+L+ LC  K+ ++A
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL+S  +RG+  DEVSYGT++  YF++     AL+LWD+M ER+++PS  TYN +I G
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKG 533

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  + ++AID LNEL++ G++PDETT+N IIH +C EG +E A +FHNKMVE SFKPD
Sbjct: 534 LCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VTCN L++GLC  G L+KALK F SW+ KGK VD +TYNTLI S+CK   ++ A     
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV------------ 467
           +ME K L PD +TY  + +AL E+GR EEA      + ++GK++                
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713

Query: 468 -------QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                  +P    + +  D +  +Y E++N  C+ G+ K+A  + +E  QKG+ ++ STY
Sbjct: 714 DVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTY 773

Query: 521 MNLMNGLIKRRKSISKAV 538
           + LM GLIKR+K  + A 
Sbjct: 774 ITLMEGLIKRQKRQTHAA 791


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/558 (47%), Positives = 372/558 (66%), Gaps = 20/558 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GFG  PD VTYNT+L+A  +KG L E R LL+ MK+ G+ P + TYN LVS + +LGW
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYN 119
           +K+A +VV+ MT     PD+ TYN+L  G C AG ++EAFRL+ EME L   LPDVVTYN
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYN 353

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++  F+   S +A +L++E+ + G+KP  VTHNI++K  CKEGK+++A   +  + E 
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD +TYNTLIDA CKAGN+ +AF +MD M  KGLKM+T TLNT+L+ LC  K+ ++A
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL+S  +RG+  DEVSYGT++  YF++     AL+LWD+M ER+++PS  TYN +I G
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKG 533

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  + ++AID LNE ++ G++PDETT+N IIH +C EG +E A +FHNKMVE SFKPD
Sbjct: 534 LCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VTCN L++GLC  G L+KALK F SW+ KGK VD +TYNTLI S+CK   ++ A     
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV------------ 467
           +ME K L PD +TY  + +AL E+GR EEA      + ++GK++                
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713

Query: 468 -------QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                  +P    + +  D +  +Y E++N  C+ G+ K+A  + +E  QKG+ ++ STY
Sbjct: 714 DVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTY 773

Query: 521 MNLMNGLIKRRKSISKAV 538
           + LM GLIKR+K  + A 
Sbjct: 774 ITLMEGLIKRQKRQTHAA 791


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  338 bits (868), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 192/458 (41%), Positives = 260/458 (56%), Gaps = 75/458 (16%)

Query: 1   MEGFGCLPDNVTYNTILDALF--KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           M+ F C PDN +YNTILD L+  + GK ++  D L+++ + GLVP++             
Sbjct: 218 MKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQI------------ 265

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
                                  TYN +I+G+C  G +E+AF+ R +M      PD+ T 
Sbjct: 266 -----------------------TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 302

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N L+      G    A KL +     G   +AVT+N +I   CKEG+ ++A  ++  MEE
Sbjct: 303 NILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEE 362

Query: 179 NGFSPDCVTYNTLIDANCKA-GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
               PDC TYN ++ A   A G +E+AF+  + M  K  K +  T N +L  LC E  LD
Sbjct: 363 KKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLD 422

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  L N+   +G  +D V                                   TYN +I
Sbjct: 423 NALKLFNTWISKGKAIDAV-----------------------------------TYNTII 447

Query: 298 WGLSQSGKTEQAIDMLNELLQ-SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            GL + G+ E+A D+L E+ + +G++PD+TT+NTII G+C EGQVEKA QF NKMVEKSF
Sbjct: 448 SGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSF 507

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           KPD+ TCNILL GLCREG+L KALK F +WI KGKA+D+VTYNT+IS LCKE R E+AF 
Sbjct: 508 KPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 567

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           LL+EM+EKKLGPD YTY AI  AL ++GR+ EA++F S
Sbjct: 568 LLAEMKEKKLGPDCYTYNAILCALADAGRM-EAEEFMS 604



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/348 (43%), Positives = 209/348 (60%), Gaps = 35/348 (10%)

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V  +T I A         A ++ + M R  LK N +T NT+++ L            +  
Sbjct: 136 VILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINAL------------VRY 183

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI---WGLSQ 302
            SK    L +  +  +I    ++ K + A+ L  +MK+    P   +YN ++   W L +
Sbjct: 184 PSKPSVCLSKAIFTNVIKFGVKN-KLSEAIGLIGKMKDFSCFPDNASYNTILDVLW-LCR 241

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           SGKT+Q+ID LNELL+SG++P + T+NTIIHG+C EGQVEKA QF NKMVEKSFKPD+ T
Sbjct: 242 SGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFT 301

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           CNILL GLC EG+L+ ALK F +WI KGKA+D+VTYNT+IS LCKE R E+AF LL+EME
Sbjct: 302 CNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEME 361

Query: 423 EKKLGPDRYTYAAIHTALVES-GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           EKKLGPD YTY AI  AL ++ G++E+A +F + MVE                 +   P 
Sbjct: 362 EKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVE-----------------KSFKPD 404

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + +  +   C++G   +AL++F     KG AI+  TY  +++GL K
Sbjct: 405 LFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 452



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/450 (34%), Positives = 239/450 (53%), Gaps = 40/450 (8%)

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           I  + +      A ++   M+ L L P+++T NTLIN                 L  +  
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLIN----------------ALVRYPS 185

Query: 147 KPNAVTHNIMIKWYCKEG---KIDKACKIVRNMEENGFSPDCVTYNTLIDAN--CKAGNM 201
           KP+      +     K G   K+ +A  ++  M++    PD  +YNT++D    C++G  
Sbjct: 186 KPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKT 245

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           +++   ++ +   GL  + IT NTI+H  C E ++++A+   N   ++ +  D  +   L
Sbjct: 246 DQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNIL 305

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           + G   +   + ALKL++    +       TYN +I GL + G+ E+A D+L E+ +  +
Sbjct: 306 LRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKL 365

Query: 322 IPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            PD  T+N I+     +EGQVEKA QF NKMVEKSFKPD+ TCNILL GLC EG+L+ AL
Sbjct: 366 GPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 425

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTA 439
           K F +WI KGKA+D+VTYNT+IS LCKE R E+AF LL+EMEEK  L PD+ TY  I   
Sbjct: 426 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILG 485

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
               G++E+A +F + MVE                 +   P   + +  +   C +G   
Sbjct: 486 YCREGQVEKAFQFRNKMVE-----------------KSFKPDLFTCNILLRGLCREGMLV 528

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            AL++F     KG AI+  TY  +++GL K
Sbjct: 529 KALKLFNTWISKGKAIDAVTYNTIISGLCK 558



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 185/349 (53%), Gaps = 3/349 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  +TYNTI+    ++G++ +     + M ++   P+  T NIL+ G C  G L  A
Sbjct: 259 GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 318

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++ +         D  TYN +I+G C  G  EEAF L  EME  KL PD  TYN ++  
Sbjct: 319 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCA 378

Query: 125 FFES-GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             ++ G+  +AF+  +++ E   KP+  T NI+++  C EG +D A K+       G + 
Sbjct: 379 LADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI 438

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYML 242
           D VTYNT+I   CK G  EEAF ++  M  K GL  +  T NTI+   C E ++++A+  
Sbjct: 439 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQF 498

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N   ++ +  D  +   L+ G  R+    +ALKL++    +       TYN +I GL +
Sbjct: 499 RNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCK 558

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
            G+ E+A D+L E+ +  + PD  T+N I+      G++E A +F +K+
Sbjct: 559 EGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME-AEEFMSKI 606



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 32/280 (11%)

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T I  Y    + + A ++++ MK   + P+  T N +I  L +               + 
Sbjct: 140 TSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPS------------KP 187

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS--GLCREGILE 377
            +   +  F  +I  F  + ++ +A+    KM + S  PD  + N +L    LCR G  +
Sbjct: 188 SVCLSKAIFTNVIK-FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTD 246

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +++      +  G     +TYNT+I   C+E ++E AF   ++M EK   PD +T   + 
Sbjct: 247 QSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILL 306

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L   G L+ A K  +  +  GK                ID  +++Y+  I+  C +GR
Sbjct: 307 RGLCTEGMLDNALKLFNTWISKGK---------------AID--AVTYNTIISGLCKEGR 349

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +++A  +  E  +K +  +  TY  ++  L      + KA
Sbjct: 350 FEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKA 389


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  330 bits (847), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 172/503 (34%), Positives = 279/503 (55%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K  K+   +  LSDM+++G+ P+  TYN L++ YC+ G L+EA  ++D M
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           +     P V+TYN +ING C  G    A  +  EM  + + PD  TYN L+     +   
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 479

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           M+A ++ DE+   G+ P+ V+ + +I    K G +D+A K  R+M+  G +PD V Y  L
Sbjct: 480 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 539

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ G M EA ++ D M  +G  ++ +T NTIL+ LC EK L EA  L    ++RG 
Sbjct: 540 IGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  ++ TLI GY +D   N+A+ L++ M +R + P   TYN +I G  +  + E+  +
Sbjct: 600 FPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 659

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + N+++   + P+  ++  +I+G+C+ G V +A +  ++MVEK F+  I+TCN ++ G C
Sbjct: 660 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 719

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G   KA +F  + +LKG   D +TYNTLI+   KE  ++ AF L+++ME   L PD  
Sbjct: 720 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 779

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I       GR++EA+     M+E G                 ++P   +Y+  IN 
Sbjct: 780 TYNVILNGFSRQGRMQEAELIMLKMIERG-----------------VNPDRSTYTSLING 822

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H +Q   K+A ++ +E  Q+G  
Sbjct: 823 HVTQNNLKEAFRVHDEMLQRGFV 845



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 232/429 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN I++ L K GK    + +L +M K G+ P+  TYNIL+   C+   
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 478

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A R+ D M     +PD+ +++ LI      G L++A +  ++M++  L PD V Y  
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 538

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F  +G   EA K+ DE+ E G   + VT+N ++   CKE  + +A ++   M E G
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+ TLI+   K GNM +A  + ++M ++ LK + +T NT++   C   ++++  
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    R  Y + +SYG LI GY      + A +LWDEM E+    +  T N ++ G 
Sbjct: 659 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 718

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A + L+ +L  G++PD  T+NT+I+GF  E  +++A    NKM      PD+
Sbjct: 719 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDV 778

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N++L+G  R+G +++A       I +G   D  TY +LI+    +  L++AF +  E
Sbjct: 779 ITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 838

Query: 421 MEEKKLGPD 429
           M ++   PD
Sbjct: 839 MLQRGFVPD 847



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 200/419 (47%), Gaps = 55/419 (13%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N +  +++++ Y +  K+ + C+  R ++  G        N+L+    K G ++ A+ + 
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             + R G+++N  TLN +++ LC  +K++     L+   ++G + D V+Y TLI  Y R 
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A +L D M  + + P  FTYNA+I GL ++GK  +A  +L+E+L+ GM PD  T+
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 329 NTIIHGFC----------------SEGQV-------------------EKALQFHNKMVE 353
           N ++   C                S+G V                   ++AL++   M  
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               PD V   IL+ G CR G++ +ALK     + +G  +D VTYNT+++ LCKE+ L +
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSE 586

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-- 471
           A  L +EM E+ + PD YT+  +     + G + +A     +M++   +   VV  NT  
Sbjct: 587 ADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLI 645

Query: 472 -----------------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                                  I P+ ISY   IN +C+ G   +A ++++E  +KG 
Sbjct: 646 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 704



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 174/360 (48%), Gaps = 35/360 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PD V+++ ++  L K G L++      DMK  GL P+   Y IL+ G+C+ G 
Sbjct: 489 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME------------- 107
           + EA++V D M +     DV TYN ++NG C   ML EA  L  EM              
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608

Query: 108 ----------------------SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                                    L PDVVTYNTLI+ F +     +  +L +++    
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I PN +++ I+I  YC  G + +A ++   M E GF    +T NT++   C+AGN  +A 
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
             +  M  KG+  + IT NT+++    E+ +D A+ L+N     G   D ++Y  ++ G+
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R  +   A  +  +M ER + P   TY ++I G       ++A  + +E+LQ G +PD+
Sbjct: 789 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 52/206 (25%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            F+ ++  +    ++ +  +    +  K     I  CN LL GL + G ++ A + ++  
Sbjct: 290 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 349

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           +  G  V+  T N +I++LCK +++                                   
Sbjct: 350 VRSGVQVNVYTLNIMINALCKNQKI----------------------------------- 374

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           E  + F S M E G                 + P  ++Y+  IN +C QG  ++A ++ +
Sbjct: 375 ENTKSFLSDMEEKG-----------------VFPDVVTYNTLINAYCRQGLLEEAFELMD 417

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
               KG+     TY  ++NGL K  K
Sbjct: 418 SMSGKGLKPCVFTYNAIINGLCKTGK 443


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  330 bits (847), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 172/503 (34%), Positives = 279/503 (55%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K  K+   +  LSDM+++G+ P+  TYN L++ YC+ G L+EA  ++D M
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           +     P V+TYN +ING C  G    A  +  EM  + + PD  TYN L+     +   
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 375

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           M+A ++ DE+   G+ P+ V+ + +I    K G +D+A K  R+M+  G +PD V Y  L
Sbjct: 376 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 435

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ G M EA ++ D M  +G  ++ +T NTIL+ LC EK L EA  L    ++RG 
Sbjct: 436 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  ++ TLI GY +D   N+A+ L++ M +R + P   TYN +I G  +  + E+  +
Sbjct: 496 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 555

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + N+++   + P+  ++  +I+G+C+ G V +A +  ++MVEK F+  I+TCN ++ G C
Sbjct: 556 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 615

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G   KA +F  + +LKG   D +TYNTLI+   KE  ++ AF L+++ME   L PD  
Sbjct: 616 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 675

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I       GR++EA+     M+E G                 ++P   +Y+  IN 
Sbjct: 676 TYNVILNGFSRQGRMQEAELIMLKMIERG-----------------VNPDRSTYTSLING 718

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H +Q   K+A ++ +E  Q+G  
Sbjct: 719 HVTQNNLKEAFRVHDEMLQRGFV 741



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 232/429 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN I++ L K GK    + +L +M K G+ P+  TYNIL+   C+   
Sbjct: 315 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 374

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A R+ D M     +PD+ +++ LI      G L++A +  ++M++  L PD V Y  
Sbjct: 375 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 434

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F  +G   EA K+ DE+ E G   + VT+N ++   CKE  + +A ++   M E G
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+ TLI+   K GNM +A  + ++M ++ LK + +T NT++   C   ++++  
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    R  Y + +SYG LI GY      + A +LWDEM E+    +  T N ++ G 
Sbjct: 555 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 614

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A + L+ +L  G++PD  T+NT+I+GF  E  +++A    NKM      PD+
Sbjct: 615 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDV 674

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N++L+G  R+G +++A       I +G   D  TY +LI+    +  L++AF +  E
Sbjct: 675 ITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 734

Query: 421 MEEKKLGPD 429
           M ++   PD
Sbjct: 735 MLQRGFVPD 743



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 171/325 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PDNV Y  ++    + G ++E   +  +M +QG V +  TYN +++G CK   
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +   MT+    PD +T+  LING+   G + +A  L + M    L PDVVTYNT
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F +     +  +L +++    I PN +++ I+I  YC  G + +A ++   M E G
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F    +T NT++   C+AGN  +A   +  M  KG+  + IT NT+++    E+ +D A+
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+N     G   D ++Y  ++ G+ R  +   A  +  +M ER + P   TY ++I G 
Sbjct: 660 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 719

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
                 ++A  + +E+LQ G +PD+
Sbjct: 720 VTQNNLKEAFRVHDEMLQRGFVPDD 744



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 200/419 (47%), Gaps = 55/419 (13%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N +  +++++ Y +  K+ + C+  R ++  G        N+L+    K G ++ A+ + 
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             + R G+++N  TLN +++ LC  +K++     L+   ++G + D V+Y TLI  Y R 
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A +L D M  + + P  FTYNA+I GL ++GK  +A  +L+E+L+ GM PD  T+
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 329 NTIIHGFC----------------SEGQV-------------------EKALQFHNKMVE 353
           N ++   C                S+G V                   ++AL++   M  
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               PD V   IL+ G CR G++ +ALK     + +G  +D VTYNT+++ LCKE+ L +
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 482

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-- 471
           A  L +EM E+ + PD YT+  +     + G + +A     +M++   +   VV  NT  
Sbjct: 483 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLI 541

Query: 472 -----------------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                                  I P+ ISY   IN +C+ G   +A ++++E  +KG 
Sbjct: 542 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 600



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 52/206 (25%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            F+ ++  +    ++ +  +    +  K     I  CN LL GL + G ++ A + ++  
Sbjct: 186 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 245

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           +  G  V+  T N +I++LCK +++                                   
Sbjct: 246 VRSGVQVNVYTLNIMINALCKNQKI----------------------------------- 270

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           E  + F S M E G                 + P  ++Y+  IN +C QG  ++A ++ +
Sbjct: 271 ENTKSFLSDMEEKG-----------------VFPDVVTYNTLINAYCRQGLLEEAFELMD 313

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
               KG+     TY  ++NGL K  K
Sbjct: 314 SMSGKGLKPCVFTYNAIINGLCKTGK 339


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 172/503 (34%), Positives = 279/503 (55%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K  K+   +  LSDM+++G+ P+  TYN L++ YC+ G L+EA  ++D M
Sbjct: 99  TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 158

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           +     P V+TYN +ING C  G    A  +  EM  + + PD  TYN L+     +   
Sbjct: 159 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 218

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           M+A ++ DE+   G+ P+ V+ + +I    K G +D+A K  R+M+  G +PD V Y  L
Sbjct: 219 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 278

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ G M EA ++ D M  +G  ++ +T NTIL+ LC EK L EA  L    ++RG 
Sbjct: 279 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  ++ TLI GY +D   N+A+ L++ M +R + P   TYN +I G  +  + E+  +
Sbjct: 339 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 398

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + N+++   + P+  ++  +I+G+C+ G V +A +  ++MVEK F+  I+TCN ++ G C
Sbjct: 399 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 458

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G   KA +F  + +LKG   D +TYNTLI+   KE  ++ AF L+++ME   L PD  
Sbjct: 459 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 518

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I       GR++EA+     M+E G                 ++P   +Y+  IN 
Sbjct: 519 TYNVILNGFSRQGRMQEAELIMLKMIERG-----------------VNPDRSTYTSLING 561

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H +Q   K+A ++ +E  Q+G  
Sbjct: 562 HVTQNNLKEAFRVHDEMLQRGFV 584



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 232/429 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN I++ L K GK    + +L +M K G+ P+  TYNIL+   C+   
Sbjct: 158 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 217

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A R+ D M     +PD+ +++ LI      G L++A +  ++M++  L PD V Y  
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F  +G   EA K+ DE+ E G   + VT+N ++   CKE  + +A ++   M E G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+ TLI+   K GNM +A  + ++M ++ LK + +T NT++   C   ++++  
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    R  Y + +SYG LI GY      + A +LWDEM E+    +  T N ++ G 
Sbjct: 398 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 457

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A + L+ +L  G++PD  T+NT+I+GF  E  +++A    NKM      PD+
Sbjct: 458 CRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDV 517

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N++L+G  R+G +++A       I +G   D  TY +LI+    +  L++AF +  E
Sbjct: 518 ITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDE 577

Query: 421 MEEKKLGPD 429
           M ++   PD
Sbjct: 578 MLQRGFVPD 586



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 55/418 (13%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N +  +++++ Y +  K+ + C+  R ++  G        N+L+    K G ++ A+ + 
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             + R G+++N  TLN +++ LC  +K++     L+   ++G + D V+Y TLI  Y R 
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A +L D M  + + P  FTYNA+I GL ++GK  +A  +L+E+L+ GM PD  T+
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 329 NTIIHGFC----------------SEGQV-------------------EKALQFHNKMVE 353
           N ++   C                S+G V                   ++AL++   M  
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               PD V   IL+ G CR G++ +ALK     + +G  +D VTYNT+++ LCKE+ L +
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-- 471
           A  L +EM E+ + PD YT+  +     + G + +A     +M++   +   VV  NT  
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLI 384

Query: 472 -----------------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
                                  I P+ ISY   IN +C+ G   +A ++++E  +KG
Sbjct: 385 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 171/325 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PDNV Y  ++    + G ++E   +  +M +QG V +  TYN +++G CK   
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +   MT+    PD +T+  LING+   G + +A  L + M    L PDVVTYNT
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F +     +  +L +++    I PN +++ I+I  YC  G + +A ++   M E G
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F    +T NT++   C+AGN  +A   +  M  KG+  + IT NT+++    E+ +D A+
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+N     G   D ++Y  ++ G+ R  +   A  +  +M ER + P   TY ++I G 
Sbjct: 503 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 562

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
                 ++A  + +E+LQ G +PD+
Sbjct: 563 VTQNNLKEAFRVHDEMLQRGFVPDD 587



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 52/206 (25%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            F+ ++  +    ++ +  +    +  K     I  CN LL GL + G ++ A + ++  
Sbjct: 29  VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           +  G  V+  T N +I++LCK +++                                   
Sbjct: 89  VRSGVQVNVYTLNIMINALCKNQKI----------------------------------- 113

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           E  + F S M E G                 + P  ++Y+  IN +C QG  ++A ++ +
Sbjct: 114 ENTKSFLSDMEEKG-----------------VFPDVVTYNTLINAYCRQGLLEEAFELMD 156

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
               KG+     TY  ++NGL K  K
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGK 182


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  327 bits (838), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 190/584 (32%), Positives = 304/584 (52%), Gaps = 63/584 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYNT++D+L K G L E R L  DM  +  VPN  TY++L++G CK+G + EA  +
Sbjct: 249 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEAREL 308

Query: 68  VDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEME--SLKLLPDVVTYNTLIN 123
           +  MT+     LP++ TYN  ++G C   M  EA  L + +   SL++ PD VT++TLI+
Sbjct: 309 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 368

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G+  EA  + D++   G  PN +T+N ++   CK  K+++A  ++ +M + G +P
Sbjct: 369 GLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTP 428

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY+ L+DA CKA  ++EA  ++  M  +G   N +T N+I+  LC   +  EA+ + 
Sbjct: 429 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMF 488

Query: 244 NS-ASKRGYYLDEVSYGTLITGYFRDEKA------------------------------- 271
           +  A K G   D+++Y TLI G FR  +A                               
Sbjct: 489 DDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDV 548

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +RAL++++ M E +++P   T+N +I G  ++G  EQA  +  E++   + PD  TF  +
Sbjct: 549 SRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 608

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G C  GQVE A    + M      P++VT N L+ GLC+ G +E+A +F    +  G 
Sbjct: 609 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGC 668

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             DS+TY +L+ +LC+  R +DA  L+SE++     PD  TY  +   L +SG+ E+A  
Sbjct: 669 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAIT 728

Query: 452 FTSIMVETGKINH-QVVQPNT----------------------SKTPEEIDPSSISYSEK 488
               MV  GK +H  VV  NT                      S+      P+ ++YS  
Sbjct: 729 VLEEMV--GKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVL 786

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAI--NKSTYMNLMNGLIKR 530
           IN  C  GR  +A ++ +E  +K   +  N  TY + ++GL K+
Sbjct: 787 INGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQ 830



 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 177/534 (33%), Positives = 290/534 (54%), Gaps = 26/534 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYNTI++ L K  +L    +L  ++ ++G  P+  TYN L+   CK G L+EA
Sbjct: 211 GVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 270

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
            R+   M+    +P+V TY++LING C  G ++EA  L +EM  +S  +LP+++TYN+ +
Sbjct: 271 RRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 330

Query: 123 NRFFESGRSMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +   +   + EA +L+  L +  ++  P+ VT + +I   CK G+ID+AC +  +M   G
Sbjct: 331 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 390

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ +TYN L++  CKA  ME A  M++ M  KG+  + IT + ++   C   ++DEA 
Sbjct: 391 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 450

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWG 299
            LL+  + RG   + V++ ++I G  + +++  A +++D+M  +  ++P   TY  +I G
Sbjct: 451 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDG 510

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+  QA  +L+ +      PD   FN  I+G    G V +ALQ +N+M+E    PD
Sbjct: 511 LFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPD 566

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT NIL++G C+ G  E+A   F   + K    D +T+  LI  LCK  ++E A  +L 
Sbjct: 567 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD 626

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M    + P+  TY A+   L +SGR+EEA +F   MV +G +                 
Sbjct: 627 LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV----------------- 669

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           P SI+Y   +   C   R  DALQ+  E +  G   +  TY  L++GL K  ++
Sbjct: 670 PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQT 723



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 297/587 (50%), Gaps = 59/587 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TYN +++ L K  K+     ++  M  +G+ P+  TY++LV  +CK   + EA
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 449

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK--LLPDVVTYNTLI 122
           + ++  M      P+V T+N +I+G C +    EAF++  +M +LK  L+PD +TY TLI
Sbjct: 450 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM-ALKHGLVPDKITYCTLI 508

Query: 123 NRFFESGRSMEAFKLIDELDE----------HGIK---------------------PNAV 151
           +  F +GR+ +A  L+D + +          +G+                      P+ V
Sbjct: 509 DGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKV 568

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T NI+I   CK G  ++A  +   M      PD +T+  LID  CKAG +E A  ++D+M
Sbjct: 569 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
           G  G+  N +T N ++H LC   +++EA   L      G   D ++YG+L+    R  + 
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 688

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + AL+L  E+K     P T TYN ++ GL +SG+TEQAI +L E++  G  PD  T+NT+
Sbjct: 689 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748

Query: 332 IHGFCSEGQVEKALQFHNKM---VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           I   C  G +E+A + H  M   V +   P++VT ++L++GLC+ G +++A +  +  + 
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808

Query: 389 KGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL--GPDRYTYAAIHTALVESG 444
           K   V  + +TYN+ +  LCK+  + +A  L+  + +  L   PD  T++ +   L + G
Sbjct: 809 KSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 868

Query: 445 RLEEAQKFTSIMVETG----KINHQVVQPNTSKT--------------PEEIDPSSISYS 486
           + +EA      M+  G     + + V+     KT               + + P  I+YS
Sbjct: 869 QTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS 928

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             ++  C      +AL++      +G   N  T+ ++++GL K  +S
Sbjct: 929 VLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQS 975



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 283/542 (52%), Gaps = 19/542 (3%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            +PD VT+N ++    K G   +   L  +M  + L P+  T+  L+ G CK G ++ A  
Sbjct: 564  VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD 623

Query: 67   VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            ++DLM      P+V TYN L++G C +G +EEA +  +EM S   +PD +TY +L+    
Sbjct: 624  ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 683

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             + R+ +A +L+ EL   G  P+ VT+NI++    K G+ ++A  ++  M   G  PD V
Sbjct: 684  RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM---NTITLNTILHTLCCEKKLDEAYMLL 243
            TYNTLID+ CKAG++EEA R+   M  +  +    N +T + +++ LC   ++DEA  L+
Sbjct: 744  TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803

Query: 244  NSASKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKER--QIMPSTFTYNAMIWG 299
                ++   +  + ++Y + + G  +      A +L   +++   ++ P T T++ +I G
Sbjct: 804  QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863

Query: 300  LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            L + G+T++A ++ ++++  G +P+  T+N +++G C   ++E+A      MV+K   PD
Sbjct: 864  LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPD 923

Query: 360  IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            ++T ++L+   C+   +++AL+       +G   + VT+N++I  LCK  +  +AF +  
Sbjct: 924  VITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFD 983

Query: 420  EMEEKK-LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE-- 476
            +M  K  L PD+ TY  +   L  +G   +A+     M +             SK  +  
Sbjct: 984  DMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVS 1043

Query: 477  ---------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     E+ P  ++++  I   C  G ++ A  +FEE   K +  +  T+  L++GL
Sbjct: 1044 RALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 1103

Query: 528  IK 529
             K
Sbjct: 1104 CK 1105



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 140/385 (36%), Positives = 225/385 (58%), Gaps = 15/385 (3%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ---GLVPNRTTYNILVSGYCK 57
            M G G  PD VTYNT++D+L K G L E R L  DM  +     VPN  TY++L++G CK
Sbjct: 733  MVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCK 792

Query: 58   LGWLKEAMRVVDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEME--SLKLLP 113
            +G + EA  ++  M +     LP++ TYN  ++G C   M+ EA  L + +   SL++ P
Sbjct: 793  VGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSP 852

Query: 114  DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
            D VT++TLI+   + G++ EA  + D++   G  PN VT+N+++   CK  K+++A  ++
Sbjct: 853  DTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMI 912

Query: 174  RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             +M + G +PD +TY+ L+DA CKA +++EA  ++  M  +G   N +T N+I+  LC  
Sbjct: 913  ESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 972

Query: 234  KKLDEAYMLLNSAS-KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +  EA+ + +  + K G   D+++Y TLI G FR   A +A  L D M +    P T+ 
Sbjct: 973  DQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYA 1028

Query: 293  YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
            +N  I GLS+ G   +A   L+ +L+  ++PD+ TFN +I G C  G  E+A     +MV
Sbjct: 1029 FNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 1085

Query: 353  EKSFKPDIVTCNILLSGLCREGILE 377
             K+ +PD++T   L+ GLC+ G +E
Sbjct: 1086 AKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/455 (33%), Positives = 247/455 (54%), Gaps = 15/455 (3%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   GC+PD++TY +++ AL +  + ++   L+S++K  G  P+  TYNILV G  K G 
Sbjct: 663  MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVT 117
             ++A+ V++ M      PDV TYN LI+  C AG LEEA RL  +M S      +P+VVT
Sbjct: 723  TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782

Query: 118  YNTLINRFFESGRSMEAFKLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            Y+ LIN   + GR  EA +LI E+      + PN +T+N  +   CK+  + +AC+++R+
Sbjct: 783  YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842

Query: 176  MEENGF--SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
            + +     SPD VT++TLID  CK G  +EA  + D M   G   N +T N +++ LC  
Sbjct: 843  LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902

Query: 234  KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
             K++ A+ ++ S   +G   D ++Y  L+  + +    + AL+L   M  R   P+  T+
Sbjct: 903  DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962

Query: 294  NAMIWGLSQSGKTEQAIDMLNEL-LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
            N++I GL +S ++ +A  M +++ L+ G+ PD+ T+ T+I G    G   +A    + M 
Sbjct: 963  NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP 1022

Query: 353  EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            +    PD    N  ++GL + G + +AL       L     D VT+N LI+  CK    E
Sbjct: 1023 D----PDTYAFNCCINGLSKLGDVSRALHRMLELEL---VPDKVTFNILIAGACKAGNFE 1075

Query: 413  DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             A  L  EM  K L PD  T+ A+   L ++G++E
Sbjct: 1076 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 238/506 (47%), Gaps = 58/506 (11%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR-------------FF 126
           ++++N  +N    +G   +A  L +     +  P+  TY+TL+               FF
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFF 170

Query: 127 ------------------------ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
                                   E+ R++E F+   E+   G+ P  VT+N +I   CK
Sbjct: 171 RRIRSSSRSVADYNIVLQSLCRAGETARALEIFR--GEMARDGVAPTIVTYNTIINGLCK 228

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
             ++    ++   + E G  PD VTYNTLID+ CKAG++EEA R+   M  +    N +T
Sbjct: 229 SNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVT 288

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDE 280
            + +++ LC   ++DEA  L+   +++   +  + ++Y + + G  +      A +L   
Sbjct: 289 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 348

Query: 281 MKER--QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           +++   ++ P T T++ +I GL + G+ ++A  + ++++  G +P+  T+N +++G C  
Sbjct: 349 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 408

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
            ++E+A      MV+K   PD++T ++L+   C+   +++AL+       +G   + VT+
Sbjct: 409 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 468

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           N++I  LCK  R  +AF +  +M  K  L PD+ TY  +   L  +GR  +A+     M 
Sbjct: 469 NSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP 528

Query: 458 ETGKINHQVVQPNTSKTPE--------------EIDPSSISYSEKINEHCSQGRYKDALQ 503
           +             SK  +              E+ P  ++++  I   C  G ++ A  
Sbjct: 529 DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASA 588

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           +FEE   K +  +  T+  L++GL K
Sbjct: 589 LFEEMVAKNLQPDVMTFGALIDGLCK 614



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 194/429 (45%), Gaps = 57/429 (13%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN---- 200
           G K    + N  +    K G   KA  + R+       P+  TY+TL+ A  KAG     
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 201 ---------------------------MEEAFRMMDV----MGRKGLKMNTITLNTILHT 229
                                        E  R +++    M R G+    +T NTI++ 
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           LC   +L     L     +RG++ D V+Y TLI    +      A +L  +M  R  +P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPDETTFNTIIHGFCSEGQVEKALQF 347
             TY+ +I GL + G+ ++A +++ E+ +    ++P+  T+N+ + G C +    +A + 
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 348 HNKMVEKSFK--PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
              + + S +  PD VT + L+ GLC+ G +++A   F   I  G   + +TYN L++ L
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK  ++E A  ++  M +K + PD  TY+ +  A  ++ R++EA +    M   G     
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG----- 460

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK-GIAINKSTYMNLM 524
                         P+ ++++  I+  C   R  +A Q+F++   K G+  +K TY  L+
Sbjct: 461 ------------CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLI 508

Query: 525 NGLIKRRKS 533
           +GL +  ++
Sbjct: 509 DGLFRTGRA 517


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  314 bits (805), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 169/503 (33%), Positives = 274/503 (54%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K  K   V   LSDM+ +G+  +  TYN L++ YC+ G ++EA ++++  
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           +     P + TYN ++ G C  G  + A  +  EM  L L P+  TYNTL+         
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +EA ++ DE+   G+ P+ V+ + +I    + G + +A    R ME +G  PD V Y  L
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  C+ G + +A +M D M  +G  M+ +T NT L+ LC +K   +A ML N   +RG 
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI GY +D   ++AL L++ M    + P   TYN +I G  ++G+  +A +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++++  +IPD  ++ T+++GFCS G + +AL   ++M+EK  +P++VTCN L+ G C
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G + KA ++    I  G   DS +YNTLI    KE  LE AF L++EME++ L  +  
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I       G+++EA++    M+E G                 I+P   +YS  IN 
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIG-----------------INPDGATYSSLING 721

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H SQ   K+A +  +E  Q+G+ 
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 253/517 (48%), Gaps = 17/517 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y+ ++    +  KL E  +    ++++G+  +    N L+ G  + GW+  A  +   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +     +V+T N+++N  C     E       +ME   +  D+VTYNTLIN +   G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EAF+L++     G++P  +T+N ++   CK GK D+A  ++  M + G +P+  TYNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+   C+  N+ EA  + D M R+G+  + ++ ++++  L     L +A M      + G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V Y  LI G+ R+   + ALK+ DEM  R       TYN  + GL +      A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + NE+++ GM+PD  TF T+I G+C +G ++KAL     MV  + KPD VT N L+ G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G + +A + +   I K    D ++Y T+++  C    L +A  L  +M EK + P+ 
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T   +      SG + +A ++ S M+  G I                 P S SY+  I+
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGII-----------------PDSFSYNTLID 650

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +  +   + A  +  E  ++G+  N  TY  ++NG 
Sbjct: 651 GYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 243/462 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G   D VTYNT+++A  ++G + E   LL+    +G+ P   TYN ++ G CK+G 
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  V+  M Q    P+  TYN L+   C    + EA  +  EM    +LPD+V++++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI     +G   +A     E++  GI P+ V + I+I  +C+ G +  A K+   M   G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VTYNT ++  CK     +A  + + M  +G+  +  T  T++   C +  +D+A 
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +  +     D+V+Y TLI G+ +  +  RA +LWD+M  + I+P   +Y  ++ G 
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG   +A+++ +++L+ G+ P+  T NT+I G+C  G + KA ++ +KM+     PD 
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N L+ G  +E  LEKA         +G   + +TYN +++  C E ++++A  +L +
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           M E  + PD  TY+++    V    ++EA +F   M++ G +
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/425 (33%), Positives = 230/425 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +TYN IL  L K GK +  +D+L +M + GL PN  TYN L+   C+   + EA
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M++   LPD+ +++ LI      G L +A    +EME   ++PD V Y  LI+ 
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G   +A K+ DE+   G   + VT+N  +   CK+     A  +   M E G  PD
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+ TLI   CK GNM++A  + + M R  LK + +T NT++   C   ++  A  L +
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++    D +SYGT++ G+        AL L D+M E+ I P+  T N +I G  +SG
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A + L++++ +G+IPD  ++NT+I G+  E  +EKA    N+M ++  + +I+T N
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++L+G C EG +++A +  R  I  G   D  TY++LI+    +  +++AF    EM ++
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741

Query: 425 KLGPD 429
            L PD
Sbjct: 742 GLVPD 746



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 161/323 (49%), Gaps = 35/323 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +PDNV Y  ++D   + G L++   +  +M  +G   +  TYN  ++G CK   
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  + + M +   +PD +T+  LI G+C  G +++A  L + M    L PD VTYNT
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 121 LI-----------------------------------NRFFESGRSMEAFKLIDELDEHG 145
           LI                                   N F  SG   EA  L D++ E G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+PN VT N +IK YC+ G + KA + +  M  NG  PD  +YNTLID   K  N+E+AF
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +++ M ++GL+ N IT N IL+  C E K+ EA  +L    + G   D  +Y +LI G+
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722

Query: 266 FRDEKANRALKLWDEMKERQIMP 288
              +    A +  DEM +R ++P
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVP 745


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  314 bits (805), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 169/503 (33%), Positives = 274/503 (54%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K  K   V   LSDM+ +G+  +  TYN L++ YC+ G ++EA ++++  
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           +     P + TYN ++ G C  G  + A  +  EM  L L P+  TYNTL+         
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +EA ++ DE+   G+ P+ V+ + +I    + G + +A    R ME +G  PD V Y  L
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  C+ G + +A +M D M  +G  M+ +T NT L+ LC +K   +A ML N   +RG 
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI GY +D   ++AL L++ M    + P   TYN +I G  ++G+  +A +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++++  +IPD  ++ T+++GFCS G + +AL   ++M+EK  +P++VTCN L+ G C
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G + KA ++    I  G   DS +YNTLI    KE  LE AF L++EME++ L  +  
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I       G+++EA++    M+E G                 I+P   +YS  IN 
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIG-----------------INPDGATYSSLING 721

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H SQ   K+A +  +E  Q+G+ 
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 253/517 (48%), Gaps = 17/517 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y+ ++    +  KL E  +    ++++G+  +    N L+ G  + GW+  A  +   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +     +V+T N+++N  C     E       +ME   +  D+VTYNTLIN +   G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EAF+L++     G++P  +T+N ++   CK GK D+A  ++  M + G +P+  TYNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+   C+  N+ EA  + D M R+G+  + ++ ++++  L     L +A M      + G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V Y  LI G+ R+   + ALK+ DEM  R       TYN  + GL +      A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + NE+++ GM+PD  TF T+I G+C +G ++KAL     MV  + KPD VT N L+ G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G + +A + +   I K    D ++Y T+++  C    L +A  L  +M EK + P+ 
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T   +      SG + +A ++ S M+  G I                 P S SY+  I+
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGII-----------------PDSFSYNTLID 650

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +  +   + A  +  E  ++G+  N  TY  ++NG 
Sbjct: 651 GYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 243/462 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G   D VTYNT+++A  ++G + E   LL+    +G+ P   TYN ++ G CK+G 
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  V+  M Q    P+  TYN L+   C    + EA  +  EM    +LPD+V++++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI     +G   +A     E++  GI P+ V + I+I  +C+ G +  A K+   M   G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VTYNT ++  CK     +A  + + M  +G+  +  T  T++   C +  +D+A 
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +  +     D+V+Y TLI G+ +  +  RA +LWD+M  + I+P   +Y  ++ G 
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG   +A+++ +++L+ G+ P+  T NT+I G+C  G + KA ++ +KM+     PD 
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N L+ G  +E  LEKA         +G   + +TYN +++  C E ++++A  +L +
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           M E  + PD  TY+++    V    ++EA +F   M++ G +
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/425 (33%), Positives = 230/425 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +TYN IL  L K GK +  +D+L +M + GL PN  TYN L+   C+   + EA
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M++   LPD+ +++ LI      G L +A    +EME   ++PD V Y  LI+ 
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G   +A K+ DE+   G   + VT+N  +   CK+     A  +   M E G  PD
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+ TLI   CK GNM++A  + + M R  LK + +T NT++   C   ++  A  L +
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++    D +SYGT++ G+        AL L D+M E+ I P+  T N +I G  +SG
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A + L++++ +G+IPD  ++NT+I G+  E  +EKA    N+M ++  + +I+T N
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++L+G C EG +++A +  R  I  G   D  TY++LI+    +  +++AF    EM ++
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741

Query: 425 KLGPD 429
            L PD
Sbjct: 742 GLVPD 746



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 161/323 (49%), Gaps = 35/323 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +PDNV Y  ++D   + G L++   +  +M  +G   +  TYN  ++G CK   
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  + + M +   +PD +T+  LI G+C  G +++A  L + M    L PD VTYNT
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 121 LI-----------------------------------NRFFESGRSMEAFKLIDELDEHG 145
           LI                                   N F  SG   EA  L D++ E G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+PN VT N +IK YC+ G + KA + +  M  NG  PD  +YNTLID   K  N+E+AF
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +++ M ++GL+ N IT N IL+  C E K+ EA  +L    + G   D  +Y +LI G+
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722

Query: 266 FRDEKANRALKLWDEMKERQIMP 288
              +    A +  DEM +R ++P
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVP 745


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 177/531 (33%), Positives = 290/531 (54%), Gaps = 24/531 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN +L  L   G++++ + L   M K G  P+  TYN L+ G+CK+G 
Sbjct: 76  MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGK 135

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+++ D   +   +PDV TYN LING+C A  L+EA R+ + M S  L+PDVVTYN+
Sbjct: 136 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE-GKIDKACKIVRNMEEN 179
           L+N   ++GR  EA  LI    + G  PN +T++ +I   C+E  +++ A +++  M  N
Sbjct: 196 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD V+YN LI    +   + EA ++   + R+G +    T N ++  L  E +++EA
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + L +   K G   D ++Y   I G  +  +   AL +  +M E+  +P   ++NA+I G
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  + ++A  +L+ +   G  P+  +FNT+I G C  G+ +KA+    +M+++  KP 
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 432

Query: 360 IVTCNILLSGLCR---EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +VT NIL+ GLC+   EG +++A+  F + I KG+  D VTY+ LI  L K  +L+DA  
Sbjct: 433 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 492

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL  ME K   P+ YTY ++ + L    +++EA +    MVE G +              
Sbjct: 493 LLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV-------------- 538

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              P +I+Y   I+  C Q     AL +F+ + + G+      Y +L++GL
Sbjct: 539 ---PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 253/481 (52%), Gaps = 36/481 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYNT+L    K GKL+E   +     K+G VP+  TYN L++G+CK   L EA R+
Sbjct: 118 PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 177

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA-----------------------FRLRK 104
           +  M     +PDV TYN L+NG C  G ++EA                        R  +
Sbjct: 178 LQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELR 237

Query: 105 EMESLKLL----------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
            +ES + L          PD+V+YN LI+         EA KL   +   G +P   T+N
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           I+I    KE ++++A ++   + ++G  PD +TY   ID  CKAG +E+A  M+  M  K
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G   + ++ N +++ LC EK++DEA +LL+    +G   + +S+ TLI G  R  K  +A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLS---QSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +  + EM +R + P+  TYN ++ GL    Q G+ ++AI + + +++ G +PD  T++ +
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G    G+++ A +    M  K   P++ T N L+SGLC    +++AL+ F + + KG 
Sbjct: 478 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D++TY T+IS+LCK+  ++ A  L     E  + P    Y ++   L    R++EA K
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALK 597

Query: 452 F 452
            
Sbjct: 598 L 598



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 263/494 (53%), Gaps = 25/494 (5%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+  T  IL+    K G +++A R V+ +   K L D+ T+N+ I+G C A  + +A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLV-KGLCDISTFNIYISGLCRASRIGDAQTV 72

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
              M      P+ +TYN L++     GR  +A  L + + + G  P+ VT+N ++  +CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            GK+D+A KI     + GF PD VTYN LI+  CKA  ++EA R++  M  + L  + +T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD-EKANRALKLWDEM 281
            N++++ LC   ++DEA ML+     +G+  + ++Y TLI+G  R+  +   A +L ++M
Sbjct: 193 YNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
                 P   +YNA+I GL++     +A+ +   +L+ G  P+  T+N +I G   E +V
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
            +A +  + +V+   +PD +T  + + GLC+ G +E AL   +    KG   D V++N +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I+ LCKE+R+++A  LLS ME K   P+  ++  +      +G+ ++A      M++ G 
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG- 428

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHC---SQGRYKDALQIFEETRQKGIAINKS 518
                           + P+ ++Y+  ++  C    +GR K+A+ +F+   +KG   +  
Sbjct: 429 ----------------VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 472

Query: 519 TYMNLMNGLIKRRK 532
           TY  L++GL K  K
Sbjct: 473 TYSALIDGLGKAGK 486



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 215/417 (51%), Gaps = 42/417 (10%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK-LGWLKEAM 65
           +PD VTYN++++ L K G+++E R L+ D   +G  PN  TY+ L+SG C+ L  L+ A 
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESAR 243

Query: 66  RVVDLMTQNKSLPD-----------------------------------VWTYNMLINGW 90
           ++++ M  N   PD                                   V TYN+LI+G 
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGL 303

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
                + EAF L   +    L PD +TY   I+   ++GR  +A  ++ ++DE G  P+ 
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           V+HN +I   CKE ++D+A  ++  ME  G SP+ +++NTLI   C+AG  ++A      
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 423

Query: 211 MGRKGLKMNTITLNTILHTLC---CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           M ++G+K   +T N ++  LC    E ++ EA  L ++  ++G   D V+Y  LI G  +
Sbjct: 424 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 483

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             K + A +L   M+ +  +P+ +TYN++I GL    K ++A+++   +++ G +PD  T
Sbjct: 484 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTIT 543

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           + TII   C +  V+KAL   +  +E    P       L+ GLC    +++ALK  +
Sbjct: 544 YGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 194/437 (44%), Gaps = 85/437 (19%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFR---------------------------------- 206
           +SPD  T   L+ +  K+G +E+A R                                  
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQT 71

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           + D M + G   N IT N +L  LC   ++ +A  L     K GY  D V+Y TL+ G+ 
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  K + ALK++D   +R  +P   TYNA+I G  ++ K ++A  +L  ++   ++PD  
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 327 TFNTIIHGFCSEGQV---------------------------------EKALQFHNKMVE 353
           T+N++++G C  G+V                                 E A Q   KMV 
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVL 251

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              KPDIV+ N L+ GL RE  + +ALK F S + +G   +  TYN LI  L KE R+ +
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQP 469
           AF L S + +  L PD  TY      L ++GR+E+A      M E G     ++H  V  
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371

Query: 470 NTSK--------------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
              K                +   P++IS++  I   C  G++K A+  F+E  ++G+  
Sbjct: 372 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431

Query: 516 NKSTYMNLMNGLIKRRK 532
              TY  L++GL K R+
Sbjct: 432 TVVTYNILVDGLCKARQ 448



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 21/250 (8%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P  +T   ++  L +SGK E+A   + +LL  G+  D +TFN  I G C   ++  A   
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            + M +  F P+ +T N LLSGLC  G +  A   +   I  G + D VTYNTL+   CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +L++A  +     ++   PD  TY A+     ++ +L+EAQ+    MV          
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS--------- 183

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   E + P  ++Y+  +N  C  GR  +A  +  +   KG + N  TY  L++GL
Sbjct: 184 --------ESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGL 232

Query: 528 IKRRKSISKA 537
            +  + +  A
Sbjct: 233 CRELRRLESA 242



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 3/173 (1%)

Query: 5   GCLPDNVTYNTILDALFK---KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           G  P  VTYN ++D L K   +G++ E   L   M ++G VP+  TY+ L+ G  K G L
Sbjct: 428 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 487

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A R++  M     +P+V+TYN LI+G C    ++EA  L   M     +PD +TY T+
Sbjct: 488 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTI 547

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           I+   +     +A  L D   E G+ P +  +  +I   C   ++D+A K+++
Sbjct: 548 ISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 19/185 (10%)

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           ++K+V + + PD  T  ILL  L + G +EKA +F    ++KG   D  T+N  IS LC+
Sbjct: 5   YDKLV-RIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCR 62

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             R+ DA  +   M +    P+R TY A+ + L   GR+ +AQ     M++ G       
Sbjct: 63  ASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG------- 115

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                       P  ++Y+  ++  C  G+  +AL+IF+   ++G   +  TY  L+NG 
Sbjct: 116 ----------YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGF 165

Query: 528 IKRRK 532
            K  K
Sbjct: 166 CKADK 170



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC+P+  TYN+++  L    K++E  +L   M ++G VP+  TY  ++S  CK   
Sbjct: 497 MEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEM 556

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           + +A+ + D   +   +P    Y  LI+G C    ++EA +L
Sbjct: 557 VDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 166/503 (33%), Positives = 274/503 (54%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K  K+++V+  L DM+++G+  +  TYN L++ YC+ G L EA  V++ M
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSM 246

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           +     P ++TYN +ING C  G    A  +  EM S+ L PD  TYNTL+     +   
Sbjct: 247 SGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNF 306

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +EA  +  ++   G+ P+ ++ + +I    + G +D+A    R+M+ +G  PD V Y  L
Sbjct: 307 LEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL 366

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  C+ G M EA  + D M  +G  ++ +  NTIL+ LC +K L +A  L +   +RG 
Sbjct: 367 INGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGV 426

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI G+ ++    +AL L+  M ++ I P   TYN +I G  ++ + E+A +
Sbjct: 427 VPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANE 486

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + NE++   + P+  ++  +++G+C+ G V +A +  ++M+ K  KP +VTCN ++ G C
Sbjct: 487 LWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G L KA +F    I +G   DS+TYNTLI+   K   ++ AF L+++ME K L PD  
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVV 606

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I       GR++EA+     M+E G                 IDP   +Y+  IN 
Sbjct: 607 TYNVILNGFCRQGRMQEAELILRKMIERG-----------------IDPDRSTYTTLING 649

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           + SQ   K+A +  +E  Q+G  
Sbjct: 650 YVSQDNLKEAFRFHDEMLQRGFV 672



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 270/543 (49%), Gaps = 18/543 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  DN+ ++ ++ +  +  KLNE  D    ++++G + +    N L+ G  K+GW+  A 
Sbjct: 111 CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAW 170

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V + + ++    +V+T N+++N  C    +++      +ME   +  D+VTYNTLIN +
Sbjct: 171 EVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAY 230

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G   EAF++++ +   G+KP   T+N +I   CK+G+  +A  +   M   G SPD 
Sbjct: 231 CREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDT 290

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TYNTL+  +C+  N  EA  +   M  +G+  + I+ ++++        LD+A M    
Sbjct: 291 TTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRD 350

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G   D V Y  LI GY R+   + AL++ D+M E+        YN ++ GL +   
Sbjct: 351 MKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKL 410

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
              A  + +E+++ G++PD  TF T+IHG C EG + KAL     M +K+ KPDIVT NI
Sbjct: 411 LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNI 470

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C+   +EKA + +   I +    + ++Y  L++  C    + +AF L  EM  K 
Sbjct: 471 LIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKG 530

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----------INHQVVQPNTSKT- 474
           + P   T   +      SG L +A +F   M+  G           IN  V      K  
Sbjct: 531 IKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAF 590

Query: 475 -------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   + + P  ++Y+  +N  C QGR ++A  I  +  ++GI  ++STY  L+NG 
Sbjct: 591 FLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGY 650

Query: 528 IKR 530
           + +
Sbjct: 651 VSQ 653



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/429 (32%), Positives = 227/429 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN +++ L KKG+    + + ++M   GL P+ TTYN L+   C+   
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  +   M      PD+ +++ LI      G L++A    ++M++  L+PD V Y  
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +  +G   EA ++ D++ E G   + V +N ++   CK+  +  A  +   M E G
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+ TLI  +CK GNM +A  +  +M +K +K + +T N ++   C   ++++A 
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKAN 485

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    R  + + +SY  L+ GY      + A +LWDEM  + I P+  T N +I G 
Sbjct: 486 ELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGY 545

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG   +A + L +++  G+ PD  T+NT+I+GF     ++KA    NKM  K  +PD+
Sbjct: 546 CRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDV 605

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N++L+G CR+G +++A    R  I +G   D  TY TLI+    +  L++AF    E
Sbjct: 606 VTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDE 665

Query: 421 MEEKKLGPD 429
           M ++   PD
Sbjct: 666 MLQRGFVPD 674



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 242/462 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D VTYNT+++A  ++G L E  ++++ M  +GL P   TYN +++G CK G 
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  V + M      PD  TYN L+   C      EA  +  +M    + PD++++++
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI     +G   +A     ++   G+ P+ V + I+I  YC+ G + +A +I   M E G
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D V YNT+++  CK   + +A  + D M  +G+  +  T  T++H  C E  + +A 
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    +++    D V+Y  LI G+ +  +  +A +LW+EM  R+I P+  +Y  ++ G 
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G   +A  + +E+++ G+ P   T NT+I G+C  G + KA +F  KM+ +   PD 
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L++G  +   ++KA         KG   D VTYN +++  C++ R+++A  +L +
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           M E+ + PDR TY  +    V    L+EA +F   M++ G +
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFV 672



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 52/211 (24%)

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D   F+ +I  +    ++ +       +  K F   I  CN LL GL + G ++ A + +
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                 G  ++  T N ++++LCK+ +++D    L +ME+K +                 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGI----------------- 216

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
                   F  I                           ++Y+  IN +C +G   +A +
Sbjct: 217 --------FADI---------------------------VTYNTLINAYCREGLLGEAFE 241

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           +      KG+     TY  ++NGL K+ + +
Sbjct: 242 VMNSMSGKGLKPTLFTYNAVINGLCKKGRYV 272


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 166/503 (33%), Positives = 269/503 (53%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K GK ++V+  LS+M+  G+  +  TYN L+  YC+ G L+EA  +++ M
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM 179

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P ++TYN +ING C  G    A  +  EM ++ L PD  TYNTL+         
Sbjct: 180 ADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNF 239

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA ++  E+   G+ P+ V+ + +I  + +   +D+A    R+M++ G  PD V Y  L
Sbjct: 240 SEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVL 299

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +   C+ GNM EA ++ D M  +G  ++ I  NTIL+ LC EK L +A  L +   +RG 
Sbjct: 300 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI G+ +D    +AL L+  M +R I P    YN +I G  + G+ E+A +
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + ++   + P+  T+  +I+ +CS G V +A +  + M+EK  KP +VTCN ++ G C
Sbjct: 420 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G   KA +F    I KG A D ++YNTLI+   +E  ++ AF  +++ME++ L PD  
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDII 539

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +       GR++EA+     M+E G                 I+P   +Y+  IN 
Sbjct: 540 TYNVVMNGFCRQGRMQEAELVLRKMIEKG-----------------INPDRSTYTALING 582

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H +Q    +A +  +E  Q+G A
Sbjct: 583 HVTQDNLNEAFRFHDEMLQRGFA 605



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 271/543 (49%), Gaps = 18/543 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  +N+ ++ ++    +  KL E  +    ++ +G + +    N L+ G  K+ W++ A 
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   + ++    +V+T N+++N  C  G  ++      EME   +  D+VTYNTLI  +
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G   EAF++++ + + G+KP+  T+N +I   CK+G+  +A  I+  M   G SPD 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TYNTL+  +C+  N  EA  +   M R+G+  + ++ ++++      + LD+A +    
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K G   D V Y  L+ GY R+     ALK+ DEM E+  +     YN ++ GL +   
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 343

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
              A  + +E+++ G +PD  TF T+IHG C +G + KAL     M +++ KPDIV  N 
Sbjct: 344 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 403

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C+ G +EKA + +   I +    + +TY  LI++ C    + +AF L   M EK 
Sbjct: 404 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 463

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----------INHQVVQPNTSKT- 474
           + P   T   +      SG   +A +F   M+  G           IN  V + N  K  
Sbjct: 464 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAF 523

Query: 475 -------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   E + P  I+Y+  +N  C QGR ++A  +  +  +KGI  ++STY  L+NG 
Sbjct: 524 LWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGH 583

Query: 528 IKR 530
           + +
Sbjct: 584 VTQ 586



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 243/460 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G   D VTYNT++ A  ++G L E  ++++ M  +GL P+  TYN +++G CK G 
Sbjct: 144 MEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGR 203

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  ++  M      PD  TYN L+   C      EA  +  EM    ++PD+V++++
Sbjct: 204 YARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSS 263

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F  +    +A     ++ + G+ P+ V + +++  YC+ G + +A KI   M E G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D + YNT+++  CK   + +A ++ D M  +G   +  T  T++H  C +  + +A 
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  + ++R    D V+Y TLI G+ +  +  +A +LWD M  R+I P+  TY  +I   
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G   +A  + + +++ G+ P   T NT+I G+C  G   KA +F  +M+ K   PD 
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 503

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++ N L++G  RE  ++KA  +      +G   D +TYN +++  C++ R+++A  +L +
Sbjct: 504 ISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRK 563

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M EK + PDR TY A+    V    L EA +F   M++ G
Sbjct: 564 MIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 227/425 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TYN I++ L KKG+    + +L +M   GL P+ TTYN L+   C+     EA
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +   +PD+ +++ LI  +     L++A    ++M+   L+PD V Y  L++ 
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 302

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G  +EA K+ DE+ E G   + + +N ++   CKE  +  A K+   M E G  PD
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+ TLI  +C+ GNM +A  +   M ++ +K + +  NT++   C   ++++A  L +
Sbjct: 363 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 422

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R  + + ++YG LI  Y      + A +LWD M E+ I P+  T N +I G  +SG
Sbjct: 423 GMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 482

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            + +A + L  ++  G+ PD  ++NT+I+GF  E  ++KA  + NKM ++   PDI+T N
Sbjct: 483 DSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYN 542

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++++G CR+G +++A    R  I KG   D  TY  LI+    +  L +AF    EM ++
Sbjct: 543 VVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602

Query: 425 KLGPD 429
              PD
Sbjct: 603 GFAPD 607



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 204/357 (57%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD V++++++    +   L++      DMKK GLVP+   Y +L+ GYC+ G + EA
Sbjct: 253 GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEA 312

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++ D M +   + DV  YN ++NG C   ML +A +L  EM     LPD  T+ TLI+ 
Sbjct: 313 LKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 372

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A  L   + +  IKP+ V +N +I  +CK G+++KA ++   M      P+
Sbjct: 373 HCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPN 432

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY  LI+A C  G++ EAFR+ DVM  KG+K   +T NT++   C      +A   L 
Sbjct: 433 HITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLG 492

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D +SY TLI G+ R++  ++A    ++M++  ++P   TYN ++ G  + G
Sbjct: 493 RMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQG 552

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + ++A  +L ++++ G+ PD +T+  +I+G  ++  + +A +FH++M+++ F PD V
Sbjct: 553 RMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 237/494 (47%), Gaps = 18/494 (3%)

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
           N   +++L+  Y +   L+E      ++     L  +   N L+ G      +E A+ + 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           +E+    +  +V T N ++N   + G+  +    + E++ +GI  + VT+N +I  YC+E
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           G +++A +I+ +M + G  P   TYN +I+  CK G    A  ++  M   GL  +T T 
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           NT+L   C      EA  +     ++G   D VS+ +LI  + R+   ++AL  + +MK+
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
             ++P    Y  ++ G  ++G   +A+ + +E+L+ G + D   +NTI++G C E  +  
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +  ++MVE+   PD  T   L+ G C++G + KAL  F +   +    D V YNTLI 
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
             CK   +E A  L   M  +K+ P+  TY  +  A    G + EA +   +M+E G   
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG--- 463

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P+ ++ +  I  +C  G    A +       KG+A +  +Y  L
Sbjct: 464 --------------IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509

Query: 524 MNGLIKRRKSISKA 537
           +NG + R  ++ KA
Sbjct: 510 INGFV-REDNMDKA 522



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 210/396 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT+L    ++   +E +++  +M +QG+VP+  +++ L++ + +   
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH 273

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+     M +   +PD   Y +L++G+C  G + EA ++R EM     + DV+ YNT
Sbjct: 274 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 333

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   +     +A KL DE+ E G  P+  T   +I  +C++G + KA  +   M +  
Sbjct: 334 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 393

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V YNTLID  CK G ME+A  + D M  + +  N IT   +++  C    + EA+
Sbjct: 394 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 453

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   ++G     V+  T+I GY R   +++A +    M  + + P   +YN +I G 
Sbjct: 454 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGF 513

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +    ++A   +N++ + G++PD  T+N +++GFC +G++++A     KM+EK   PD 
Sbjct: 514 VREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDR 573

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
            T   L++G   +  L +A +F    + +G A D V
Sbjct: 574 STYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/527 (31%), Positives = 262/527 (49%), Gaps = 19/527 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+ +Y  ++D L K GKLN+ RDL   +   G+ P+   Y  L+ G C      +A  +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +    P   TYN++I+  C  GMLEEA  L K+M     +PDVVTYNT+++   +
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR  EA  L +E++  G  PN  +HN +I   C++ KID+AC++   ME     PD  +
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID   KAG + EA+++   M   G+  + +T N ++H +C    LDEA  L  S  
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G      ++  LI  + +  K + A +L   M +   +P   TY+ +I GL    + +
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L ++++    P   T NT+IHG C  G++++A +  + MV     PD+VT N L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G CR G  E+A +     + +G A + VTY  L+S LCK  RL +A G+ ++M+     
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+ +TY A+      +G+++   K    MV  G                 I P  + Y  
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG-----------------ISPDHVVYGT 470

Query: 488 KINEHCSQGRYKDALQIFEETRQ--KGIAINKSTYMNLMNGLIKRRK 532
              E C  GR   AL+I  E R+  +  A     Y   ++GL+   K
Sbjct: 471 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGK 517



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/462 (32%), Positives = 248/462 (53%), Gaps = 6/462 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VTYN I+DA  K+G L E  DL+  M + G VP+  TYN ++ G CK G ++EA
Sbjct: 75  GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA 134

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M +    P+  ++N +I G C    +++A ++  EME+  + PD  +Y  LI+ 
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G+  EA+KL   + + GI P+AVT+N++I   C    +D+A ++ ++M   G  P 
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LIDA+CK G M+EAFR++  M   G   + +T +T++  LC   ++D+A  LL 
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              KR      V+  TLI G  +  +   A ++ D M      P   TYN ++ G  ++G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +TE+A ++L++++  G+ P+  T+  ++ G C   ++ +A     +M      P++ T  
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE- 423
            L+ G C  G ++  LK F   +  G + D V Y TL + LCK  R   A  +L E  E 
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 424 ---KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              +  G + Y +A     L+++G++E A  F   MV  G++
Sbjct: 495 LRSEAWGDEVYRFAV--DGLLDAGKMEMALGFVRDMVRGGQL 534



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 244/498 (48%), Gaps = 52/498 (10%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    PD W+Y +LI+G   AG L +A  L +++    + P  V Y +LI+    +  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A +L  +++  G  P+ VT+N++I   CK G +++AC +++ M E+G  PD VTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++D  CK+G +EEA  + + M R G   N  + NTI+  LC + K+D+A  + +    R 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL---------- 300
              D  SYG LI G  +  K N A KL+  M +  I PS  TYN +I G+          
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 301 -------------------------SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
                                     + GK ++A  +L  +   G +PD  T++T+I G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           CS  +V+ A      MV++  KP +VT N L+ GLC+ G +++A +   + +  G++ D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYNTL+   C+  + E A  LLS+M  + L P+  TY A+ + L ++ RL EA    + 
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M  +G                   P+  +Y+  I   CS G+    L++F E    GI+ 
Sbjct: 421 MKSSG-----------------CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463

Query: 516 NKSTYMNLMNGLIKRRKS 533
           +   Y  L   L K  +S
Sbjct: 464 DHVVYGTLAAELCKSGRS 481



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 41/462 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTYNT++D L K G++ E   L ++M++ G  PNR ++N ++ G C+   + +A
Sbjct: 110 GHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 169

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V   M      PD W+Y +LI+G   AG L EA++L + M    + P  VTYN +I+ 
Sbjct: 170 CQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHG 229

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +    EA +L   +   G +P+  T NI+I  +CK GK+D+A ++++ M ++G  PD
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPD 289

Query: 185 CVTY-----------------------------------NTLIDANCKAGNMEEAFRMMD 209
            VTY                                   NTLI   CKAG ++EA  ++D
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G   + +T NT++H  C   + + A  LL+    RG   + V+Y  L++G  +  
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   A  ++ +MK     P+ FTY A+I G   +G+ +  + +  E++ +G+ PD   + 
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469

Query: 330 TIIHGFCSEGQVEKALQF----HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           T+    C  G+  +AL+        +  +++  ++      + GL   G +E AL F R 
Sbjct: 470 TLAAELCKSGRSARALEILREGRESLRSEAWGDEVY--RFAVDGLLDAGKMEMALGFVRD 527

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            +  G+        +L++ LCK  +  +A  +L E+ +   G
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYG 569


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 166/527 (31%), Positives = 262/527 (49%), Gaps = 19/527 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+ +Y  ++D L K GKLN+ R+L   +   G+ P+   Y  L+ G C      +A  +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +    P   TYN++I+  C  GMLEEA  L K+M     +PDVVTYNT+++   +
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S R  EA  L +E++  G  PN  +HN +I   C++ KID+AC++   ME     PD  +
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID   KAG + EA+++   M   G+  + +T N ++H +C    LDEA  L  S  
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G      ++  LI  + +  K + A +L   M +   +P   TY+ +I GL    + +
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L ++++    P   T NT+IHG C  G++++A +  + MV     PD+VT N L+
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G CR G  E+A +     + +G A + VTY  L+S LCK  RL +A G+ ++M+     
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+ +TY A+      +G+++   K    MV  G                 I P  + Y  
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG-----------------ISPDHVVYGT 470

Query: 488 KINEHCSQGRYKDALQIFEETRQ--KGIAINKSTYMNLMNGLIKRRK 532
              E C  GR   AL+I  E R+  +  A     Y   ++GL++  K
Sbjct: 471 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGK 517



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 247/462 (53%), Gaps = 6/462 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VTYN ++DA  K+G L E  DL+  M + G VP+  TYN ++ G CK   ++EA
Sbjct: 75  GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 134

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M +    P+  ++N +I G C    +++A ++  EME+  + PD  +Y  LI+ 
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G+  EA+KL   + + GI P+AVT+N++I   C    +D+A ++ ++M   G  P 
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LIDA+CK G ++EAFR++  M   G   + +T +T++  LC   ++D+A  LL 
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              KR      V+  TLI G  +  +   A ++ D M      P   TYN ++ G  ++G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +TE+A ++L++++  G+ P+  T+  ++ G C   ++ +A     +M      P++ T  
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE- 423
            L+ G C  G ++  LK F   +  G + D V Y TL + LCK  R   A  +L E  E 
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 424 ---KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              +  G + Y +A     L+E+G++E A  F   MV  G++
Sbjct: 495 LRSEAWGDEVYRFAV--DGLLEAGKMEMALGFVRDMVRGGQL 534



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 243/498 (48%), Gaps = 52/498 (10%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    PD W+Y +LI+G   AG L +A  L +++    + P  V Y +LI+    +  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A +L  +++  G  P+ VT+N+MI   CK G +++AC +++ M E+G  PD VTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++D  CK+  +EEA  + + M R G   N  + NTI+  LC + K+D+A  + +    + 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL---------- 300
              D  SYG LI G  +  K N A KL+  M +  I PS  TYN +I G+          
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 301 -------------------------SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
                                     + GK ++A  +L  +   G +PD  T++T+I G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           CS  +V+ A      MV++  KP +VT N L+ GLC+ G +++A +   + +  G++ D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYNTL+   C+  + E A  LLS+M  + L P+  TY A+ + L ++ RL EA    + 
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M  +G                   P+  +Y+  I   CS G+    L++F E    GI+ 
Sbjct: 421 MKSSG-----------------CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463

Query: 516 NKSTYMNLMNGLIKRRKS 533
           +   Y  L   L K  +S
Sbjct: 464 DHVVYGTLAAELCKSGRS 481



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 225/462 (48%), Gaps = 41/462 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTYNT++D L K  ++ E   L ++M++ G  PNR ++N ++ G C+   + +A
Sbjct: 110 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 169

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V   M      PD W+Y +LI+G   AG L EA++L + M    + P  VTYN +I+ 
Sbjct: 170 CQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHG 229

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +    EA +L   +   G +P+  T NI+I  +CK GK+D+A ++++ M ++G  PD
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD 289

Query: 185 CVTY-----------------------------------NTLIDANCKAGNMEEAFRMMD 209
            VTY                                   NTLI   CKAG ++EA  ++D
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G   + +T NT++H  C   + + A  LL+    RG   + V+Y  L++G  +  
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   A  ++ +MK     P+ FTY A+I G   +G+ +  + +  E++ +G+ PD   + 
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469

Query: 330 TIIHGFCSEGQVEKALQF----HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           T+    C  G+  +AL+        +  +++  ++      + GL   G +E AL F R 
Sbjct: 470 TLAAELCKSGRSARALEILREGRESLRSEAWGDEVY--RFAVDGLLEAGKMEMALGFVRD 527

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            +  G+        +L++ LCK  +  +A  +L E+ +   G
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYG 569


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 302/582 (51%), Gaps = 55/582 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD V+Y T+++ L K  +++E   ++  M ++G  PN  TY  LV G+C++G L  A
Sbjct: 109 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 168

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLIN 123
           + +V  MT+    P+  TYN +++G C+   L+ A +L KEME S    PDV TY+T+++
Sbjct: 169 VELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVD 228

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +SG+  +A +L++ +   G  PN VT++ ++   CK GK+D+A  +++ M  +G SP
Sbjct: 229 SLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 288

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYNT+ID +CK G ++EA+ +++ M   G + N +T   +L   C   K ++A  L+
Sbjct: 289 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 348

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++GY  +  +Y +L+  + + ++  RA +L   M ++  +P+  +YN +I GL ++
Sbjct: 349 EVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 408

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K  + + +L ++L +  +PD  TFNTII   C   +V+ A +  N + E    P++VT 
Sbjct: 409 TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 468

Query: 364 NILLSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           N L+ GLC+    ++A    R    K G + D +TYNT+I  LCK +R++ A+ L  +M 
Sbjct: 469 NSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 528

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV----ETGKINHQVVQPNTSKT---- 474
              L PD  TY+ + ++L +   ++EA     +M+    + G I +  +     KT    
Sbjct: 529 SDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLD 588

Query: 475 ---------------PEEID------------------------------PSSISYSEKI 489
                          P+ +                               P +++Y+  +
Sbjct: 589 KALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLL 648

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
              C   R +DA+ +FE  RQ G   + +TY  L+  L+ ++
Sbjct: 649 KGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKK 690



 Score =  298 bits (762), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 287/527 (54%), Gaps = 17/527 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD+VTYNT+++ L K  +L++   LL +M   G  PN  +YN ++ G+CK   ++ A+
Sbjct: 40  CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 99

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +++ M      PDV +Y  +ING C    ++EA R+  +M      P+V+TY TL++ F
Sbjct: 100 WLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPD 184
              G    A +L+ ++ E G +PNA+T+N ++   C   K+D A ++ + MEE+G   PD
Sbjct: 160 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPD 219

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+T++D+  K+G +++A R+++ M  KG   N +T +++LH LC   KLDEA  LL 
Sbjct: 220 VFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   + V+Y T+I G+ +  + + A  L +EM +    P+  TY  ++    + G
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E AI ++  +++ G +P+  T+N+++  FC + +VE+A Q  + M++K   P++V+ N
Sbjct: 340 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYN 399

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++GLC+   + + +      +      D VT+NT+I ++CK  R++ A+ L + ++E 
Sbjct: 400 TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 459

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY ++   L +S R ++A+     M                   +   P  I+
Sbjct: 460 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK----------------QGCSPDIIT 503

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           Y+  I+  C   R   A ++F +    G+A +  TY  +++ L K R
Sbjct: 504 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550



 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/565 (29%), Positives = 286/565 (50%), Gaps = 54/565 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  +YNT+L    K  ++     LL  M  +G  P+  +Y  +++G CKL  + EA
Sbjct: 74  GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEA 133

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAG------------------------------ 94
            RV+D M Q    P+V TY  L++G+C  G                              
Sbjct: 134 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHG 193

Query: 95  -----MLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                 L+ A +L KEM ES    PDV TY+T+++   +SG+  +A +L++ +   G  P
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N VT++ ++   CK GK+D+A  +++ M  +G SP+ VTYNT+ID +CK G ++EA+ ++
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M   G + N +T   +L   C   K ++A  L+    ++GY  +  +Y +L+  + + 
Sbjct: 314 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKK 373

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           ++  RA +L   M ++  +P+  +YN +I GL ++ K  + + +L ++L +  +PD  TF
Sbjct: 374 DEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTF 433

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           NTII   C   +V+ A +  N + E    P++VT N L+ GLC+    ++A    R    
Sbjct: 434 NTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTR 493

Query: 389 K-GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           K G + D +TYNT+I  LCK +R++ A+ L  +M    L PD  TY+ + ++L +   ++
Sbjct: 494 KQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMD 553

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA     +M++ G                  DP +I+Y   I+  C  G    AL+I + 
Sbjct: 554 EANNVLELMLKNG-----------------FDPGAITYGTLIDGFCKTGNLDKALEILQL 596

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
              KG   +  T+   ++ L KR +
Sbjct: 597 LLSKGSYPDVVTFSIFIDWLSKRGR 621



 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 158/503 (31%), Positives = 270/503 (53%), Gaps = 38/503 (7%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E   C PD  TY+TI+D+L K GK+++   L+  M  +G  PN  TY+ L+ G CK G L
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL 271

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            EA  ++  MT++   P++ TYN +I+G C  G ++EA+ L +EM      P+VVTY  L
Sbjct: 272 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 331

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG- 180
           ++ F + G++ +A  L++ + E G  PN  T+N ++  +CK+ ++++AC+++ +M + G 
Sbjct: 332 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 391

Query: 181 ----------------------------------FSPDCVTYNTLIDANCKAGNMEEAFR 206
                                               PD VT+NT+IDA CK   ++ A+ 
Sbjct: 392 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 451

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-YMLLNSASKRGYYLDEVSYGTLITGY 265
           + +++   G   N +T N+++H LC  ++ D+A Y+L     K+G   D ++Y T+I G 
Sbjct: 452 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 511

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            + ++ +RA KL+ +M    + P   TY+ +I  L +    ++A ++L  +L++G  P  
Sbjct: 512 CKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA 571

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+ T+I GFC  G ++KAL+    ++ K   PD+VT +I +  L + G L +A +   +
Sbjct: 572 ITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET 631

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +  G   D+VTYNTL+   C   R EDA  L   M +    PD  TY  +   LV+   
Sbjct: 632 MLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKS 691

Query: 446 LEE-AQKFTSIMVETG-KINHQV 466
            ++   + +  MV+TG K+NH++
Sbjct: 692 YKDLLAEVSKSMVDTGFKLNHEL 714



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 273/523 (52%), Gaps = 20/523 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            + +IL  L   G+ ++      +M K    P+  TYN +++G  K   L +A+R+++ M
Sbjct: 12  VHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             N   P+V++YN +++G+C A  +E A  L ++M      PDVV+Y T+IN   +  + 
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +++D++ + G +PN +T+  ++  +C+ G +D A ++VR M E G+ P+ +TYN +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190

Query: 192 IDANCKAGNMEEAFRMMDVMGRKG-LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +   C    ++ A ++   M   G    +  T +TI+ +L    K+D+A  L+ +   +G
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V+Y +L+ G  +  K + A  L   M      P+  TYN +I G  + G+ ++A 
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L E++  G  P+  T+  ++  FC  G+ E A+     MVEK + P++ T N LL   
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C++  +E+A +   S I KG   + V+YNT+I+ LCK  ++ +   LL +M      PD 
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T+  I  A+ ++ R++ A +  +++ E+G                   P+ ++Y+  ++
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESG-----------------CTPNLVTYNSLVH 473

Query: 491 EHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGLIKRRK 532
             C   R+  A  +  E TR++G + +  TY  +++GL K ++
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 516



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 175/342 (51%), Gaps = 20/342 (5%)

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M RKGLK +     +IL  LC   +  +A +     SK     D V+Y T+I G  + ++
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPP-DSVTYNTMINGLSKSDR 59

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A++L +EM +    P+ F+YN ++ G  ++ + E A+ +L +++  G  PD  ++ T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I+G C   QV++A +  +KM+++  +P+++T   L+ G CR G L+ A++  R    +G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KLGPDRYTYAAIHTALVESGRLEEA 449
              +++TYN ++  LC  R+L+ A  L  EMEE     PD +TY+ I  +LV+SG++++A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 450 QKFTSIMVETG---------KINHQVVQPN---------TSKTPEEIDPSSISYSEKINE 491
            +    MV  G          + H + +              T     P+ ++Y+  I+ 
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           HC  GR  +A  + EE    G   N  TY  L++   K  K+
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 166/503 (33%), Positives = 272/503 (54%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K GKL+ V   LS+M+++G+  +  TYN LV+ YC+ G + EA  +VD M
Sbjct: 226 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM 285

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P ++TYN LING C  G  E A R+  EM  + L P+  T+N ++         
Sbjct: 286 AGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDV 345

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA ++ +E+ + G+ P+ ++ + ++  + + G++ +A      M+  G  PD V Y  L
Sbjct: 346 WEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTIL 405

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  C+  ++  A +M + M  +G  M+ +T NT+L+ LC  K LD+A  L     +RG 
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  +  TLI GY +D    +AL L++ M  R + P   TYN ++ G  + G+ E+A +
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  +++   + P   +F+ +I+GFCS G V +A +  ++M EK  KP +VTCN ++ G  
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G L KA  F  + I +G   D +TYNTLI+S  KE   + AF L++ MEE+ L P+  
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLV 645

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY AI       GR++EA+     M++ G                 I+P   +Y+  IN 
Sbjct: 646 TYNAILGGFSRHGRMQEAEMVLHKMIDKG-----------------INPDKSTYTSLING 688

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           + S+   K+A ++ +E  Q+G  
Sbjct: 689 YVSKDNMKEAFRVHDEMLQRGFV 711



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 271/538 (50%), Gaps = 18/538 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V ++ ++    +  KL E  +    ++K+G   +    N L+    K+GW+  A +V + 
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
             ++ ++ +V+T N+++N  C  G L+       EME   +  D+VTYNTL+N +   G 
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EAF L+D +   G+KP   T+N +I   CKEG  ++A +++  M   G  P+  T+N 
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++  +C+  ++ EA R+ + M ++G+  + I+ ++I+       +L  A          G
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V Y  LI GY R++  + ALK+ +EM ER  +    TYN ++ GL +    + A 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++  E+++ G+ PD  T  T+IHG+C +G + KAL     M  +S KPD+VT N L+ G 
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G +EKA + +   I +      ++++ LI+  C    + +AF L  EM+EK + P  
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTL 574

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGK----------INHQVVQPNTSKTPEEID- 479
            T   I    + +G L +A  F + M+  G           IN  V + N  +    I+ 
Sbjct: 575 VTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINN 634

Query: 480 -------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  P+ ++Y+  +      GR ++A  +  +   KGI  +KSTY +L+NG + +
Sbjct: 635 MEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSK 692



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 242/462 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D VTYNT+++A  ++G ++E   L+  M  +GL P   TYN L++G CK G 
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A RV+D M      P+  T+N ++   C    + EA R+  EM    ++PD++++++
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  F  +G    A    +++   G+ P+ V + I+I  YC+   +  A K+   M E G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VTYNTL++  C+   +++A  +   M  +G+  +  TL T++H  C +  + +A 
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 489

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  + + R    D V+Y TL+ G+ +  +  +A +LW +M  R+I PS  +++ +I G 
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 549

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G   +A  + +E+ + G+ P   T NTII G+   G + KA  F N M+ +   PD 
Sbjct: 550 CSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDC 609

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L++   +E   ++A     +   +G   + VTYN ++    +  R+++A  +L +
Sbjct: 610 ITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHK 669

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           M +K + PD+ TY ++    V    ++EA +    M++ G +
Sbjct: 670 MIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFV 711



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 222/429 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN +++ L K+G     + +L +M   GL PN  T+N ++   C+   
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA RV + M Q   +PD+ +++ ++  +   G L  A    ++M+ + L+PD V Y  
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +  +     A K+ +E+ E G   + VT+N ++   C+   +D A ++ + M E G
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T  TLI   CK GNM +A  + + M  + LK + +T NT++   C   ++++A 
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 524

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      R  +   +S+  LI G+      + A +LWDEMKE+ I P+  T N +I G 
Sbjct: 525 ELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGY 584

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A D LN ++  G+ PD  T+NT+I+ F  E   ++A    N M E+   P++
Sbjct: 585 LRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNL 644

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N +L G  R G +++A       I KG   D  TY +LI+    +  +++AF +  E
Sbjct: 645 VTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDE 704

Query: 421 MEEKKLGPD 429
           M ++   PD
Sbjct: 705 MLQRGFVPD 713



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 177/325 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G +PD V Y  +++   +   ++    + ++M ++G V +  TYN L++G C+   
Sbjct: 390 MKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKM 449

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +   M +    PD +T   LI+G+C  G + +A  L + M    L PDVVTYNT
Sbjct: 450 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNT 509

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + G   +A +L  ++    I P+ ++ +I+I  +C  G + +A ++   M+E G
Sbjct: 510 LMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 569

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VT NT+I    +AGN+ +A   ++ M  +G+  + IT NT++++   E+  D A+
Sbjct: 570 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 629

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+N+  +RG   + V+Y  ++ G+ R  +   A  +  +M ++ I P   TY ++I G 
Sbjct: 630 FLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGY 689

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
                 ++A  + +E+LQ G +PD+
Sbjct: 690 VSKDNMKEAFRVHDEMLQRGFVPDD 714



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 44/352 (12%)

Query: 219 NTITLNTILHTLCCEKKLDEAY-MLLNSASKRGYYLDE-------------------VSY 258
           N   + T++H L   KKL EA  +LL    K G    E                   V +
Sbjct: 98  NPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVVF 157

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             LI  Y +  K     + +  +++R    S    NA++  + + G  + A  +  + ++
Sbjct: 158 DLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVK 217

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           SG I +  T N +++  C +G+++    + ++M EK    D+VT N L++  CR G++ +
Sbjct: 218 SGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSE 277

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A         KG      TYN LI+ LCKE   E A  +L EM    L P+  T+   + 
Sbjct: 278 AFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF---NP 334

Query: 439 ALVESGRLE---EAQKFTSIMVETGK----INHQVVQPNTSKTPE--------------E 477
            LVES R E   EA++  + M++ G     I+   +    S+  E               
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + P ++ Y+  IN +C       AL++  E  ++G  ++  TY  L+NGL +
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 165/503 (32%), Positives = 271/503 (53%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N ++    K  + ++V  ++S+M+K+ + P+  T+N++V    + G  + AM +VD M
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + TYN ++ G C +GM ++A+ + KEM+   + PDV ++  LI  F   G  
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA K+  E+   GIKP+ V+ + +I  + + GK+D A   +R M   G  PD V Y  +
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+AG M +A R+ D M   G   + +T NT+L+ LC E++L +A  LLN   +RG 
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI GY  + K ++AL+L+D M  +++ P   TYN +I G+ + G  ++A D
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++    + P+  T++ +I   C +GQVE A  F ++M+ K   P+I+T N ++ G C
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G + K  KF +  ++   + D +TYNTLI    KE ++ DAF LL+ ME++K+ PD  
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 577

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +       G ++EA      M   G                 I+P   +Y   IN 
Sbjct: 578 TYNMLINGFSVHGNVQEAGWIFEKMCAKG-----------------IEPDRYTYMSMING 620

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H + G  K+A Q+ +E  Q+G A
Sbjct: 621 HVTAGNSKEAFQLHDEMLQRGFA 643



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 241/460 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     PD VT+N ++DA F+ G       L+  M  +GL P   TYN ++ G C+ G 
Sbjct: 182 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 241

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  V   M      PDV ++ +LI G+C  G +EEA ++ KEM    + PD+V+++ 
Sbjct: 242 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 301

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G+   A   + E+   G+ P+ V + ++I  +C+ G +  A ++   M   G
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTL++  CK   + +A  +++ M  +G+  +  T  T++H  C E KLD+A 
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L ++   +    D V+Y TLI G  R    ++A  LWD+M  R+I P+  TY+ +I   
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E A   L+E++  G++P+  T+N+II G+C  G V K  +F  KM+     PD+
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 541

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L+ G  +E  +  A K       +    D VTYN LI+       +++A  +  +
Sbjct: 542 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 601

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  K + PDRYTY ++    V +G  +EA +    M++ G
Sbjct: 602 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641



 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 260/491 (52%), Gaps = 20/491 (4%)

Query: 57  KLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + GW   A     L+  + S  + +T N++++ +C A   ++   +  EME   + PDVV
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T+N +++  F +G +  A  L+D +   G+KP  VT+N ++K  C+ G  DKA ++ + M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           ++ G +PD  ++  LI   C+ G +EEA ++   M  +G+K + ++ + ++       K+
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D A   L      G   D V Y  +I G+ R    + AL++ DEM     +P   TYN +
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           + GL +  +   A  +LNE+ + G+ PD  TF T+IHG+C EG+++KALQ  + M+ +  
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +PDIVT N L+ G+CR+G L+KA   +     +    + VTY+ LI S C++ ++EDAFG
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----- 471
            L EM  K + P+  TY +I      SG + + QKF   M+   K++  ++  NT     
Sbjct: 493 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM-VNKVSPDLITYNTLIHGY 551

Query: 472 --------------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
                             E++ P  ++Y+  IN     G  ++A  IFE+   KGI  ++
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611

Query: 518 STYMNLMNGLI 528
            TYM+++NG +
Sbjct: 612 YTYMSMINGHV 622



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 211/394 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  ++  ++    + G++ E   +  +M+ +G+ P+  +++ L+  + + G 
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  AM  +  M     +PD   Y M+I G+C AG++ +A R+R EM     LPDVVTYNT
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   +  R ++A  L++E+ E G+ P+  T   +I  YC EGK+DKA ++   M    
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTLID  C+ G++++A  + D M  + +  N +T + ++ + C + ++++A+
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+    +G   + ++Y ++I GY R    ++  K   +M   ++ P   TYN +I G 
Sbjct: 492 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K   A  +LN + +  + PD  T+N +I+GF   G V++A     KM  K  +PD 
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            T   +++G    G  ++A +     + +G A D
Sbjct: 612 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 179/325 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG +PD V Y  ++    + G +++   +  +M   G +P+  TYN L++G CK   
Sbjct: 322 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +++ M +    PD+ T+  LI+G+C  G L++A +L   M + +L PD+VTYNT
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A  L D++    I PN VT++I+I  +C++G+++ A   +  M   G
Sbjct: 442 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 501

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYN++I   C++GN+ +  + +  M    +  + IT NT++H    E K+ +A+
Sbjct: 502 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAF 561

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   K     D V+Y  LI G+        A  ++++M  + I P  +TY +MI G 
Sbjct: 562 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 621

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
             +G +++A  + +E+LQ G  PD+
Sbjct: 622 VTAGNSKEAFQLHDEMLQRGFAPDD 646



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 183/376 (48%), Gaps = 58/376 (15%)

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           ++NT TLN ++H  C   + D+   +++   KR  + D V++  ++   FR   A  A+ 
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L D M  + + P   TYN+++ GL +SG  ++A ++  E+   G+ PD  +F  +I GFC
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLS---------------------------- 368
             G++E+AL+ + +M  +  KPD+V+ + L+                             
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 369 -------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
                  G CR G++  AL+     +  G   D VTYNTL++ LCKERRL DA GLL+EM
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 422 EEKKLGPDRYTYAA-IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--------- 471
            E+ + PD  T+   IH   +E G+L++A +    M+   ++   +V  NT         
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIE-GKLDKALQLFDTMLNQ-RLRPDIVTYNTLIDGMCRQG 450

Query: 472 ----------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                          EI P+ ++YS  I+ HC +G+ +DA    +E   KGI  N  TY 
Sbjct: 451 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 510

Query: 522 NLMNGLIKRRKSISKA 537
           +++ G   R  ++SK 
Sbjct: 511 SIIKGYC-RSGNVSKG 525



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 21/247 (8%)

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++++ LL S   P    F+ +I  +    +  +A +    +++          N LL+ L
Sbjct: 72  EIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAAL 131

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            R G    A   +R        V++ T N ++ + CK    +    ++SEME++ + PD 
Sbjct: 132 SRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDV 191

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS--------------KTPE 476
            T+  +  A   +G  E A      MV  G +   +V  N+               +  +
Sbjct: 192 VTHNVMVDARFRAGDAEAAMALVDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 477 EID-----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           E+D     P   S++  I   C  G  ++AL+I++E R +GI  +  ++  L+ GL  RR
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARR 309

Query: 532 KSISKAV 538
             +  A+
Sbjct: 310 GKMDHAM 316


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 164/501 (32%), Positives = 270/501 (53%), Gaps = 17/501 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N ++    K  + ++V  ++S+M+K+ + P+  T+N++V    + G  + AM +VD M
Sbjct: 97  TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + TYN ++ G C +GM ++A+ + KEM+   + PDV ++  LI  F   G  
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA K+  E+   GIKP+ V+ + +I  + + GK+D A   +R M   G  PD V Y  +
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+AG M +A R+ D M   G   + +T NT+L+ LC E++L +A  LLN   +RG 
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI GY  + K ++AL+L+D M  +++ P   TYN +I G+ + G  ++A D
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++    + P+  T++ +I   C +GQVE A  F ++M+ K   P+I+T N ++ G C
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G + K  KF +  ++   + D +TYNTLI    KE ++ DAF LL+ ME++K+ PD  
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +       G ++EA      M   G                 I+P   +Y   IN 
Sbjct: 517 TYNMLINGFSVHGNVQEAGWIFEKMCAKG-----------------IEPDRYTYMSMING 559

Query: 492 HCSQGRYKDALQIFEETRQKG 512
           H + G  K+A Q+ +E  Q+G
Sbjct: 560 HVTAGNSKEAFQLHDEMLQRG 580



 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 150/461 (32%), Positives = 242/461 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     PD VT+N ++DA F+ G       L+  M  +GL P   TYN ++ G C+ G 
Sbjct: 121 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 180

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  V   M      PDV ++ +LI G+C  G +EEA ++ KEM    + PD+V+++ 
Sbjct: 181 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 240

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G+   A   + E+   G+ P+ V + ++I  +C+ G +  A ++   M   G
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTL++  CK   + +A  +++ M  +G+  +  T  T++H  C E KLD+A 
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 360

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L ++   +    D V+Y TLI G  R    ++A  LWD+M  R+I P+  TY+ +I   
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E A   L+E++  G++P+  T+N+II G+C  G V K  +F  KM+     PD+
Sbjct: 421 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 480

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L+ G  +E  +  A K       +    D VTYN LI+       +++A  +  +
Sbjct: 481 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 540

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           M  K + PDRYTY ++    V +G  +EA +    M++ GK
Sbjct: 541 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581



 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 260/491 (52%), Gaps = 20/491 (4%)

Query: 57  KLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + GW   A     L+  + S  + +T N++++ +C A   ++   +  EME   + PDVV
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T+N +++  F +G +  A  L+D +   G+KP  VT+N ++K  C+ G  DKA ++ + M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           ++ G +PD  ++  LI   C+ G +EEA ++   M  +G+K + ++ + ++       K+
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D A   L      G   D V Y  +I G+ R    + AL++ DEM     +P   TYN +
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           + GL +  +   A  +LNE+ + G+ PD  TF T+IHG+C EG+++KALQ  + M+ +  
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +PDIVT N L+ G+CR+G L+KA   +     +    + VTY+ LI S C++ ++EDAFG
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 431

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----- 471
            L EM  K + P+  TY +I      SG + + QKF   M+   K++  ++  NT     
Sbjct: 432 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM-VNKVSPDLITYNTLIHGY 490

Query: 472 --------------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
                             E++ P  ++Y+  IN     G  ++A  IFE+   KGI  ++
Sbjct: 491 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 550

Query: 518 STYMNLMNGLI 528
            TYM+++NG +
Sbjct: 551 YTYMSMINGHV 561



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 183/376 (48%), Gaps = 58/376 (15%)

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           ++NT TLN ++H  C   + D+   +++   KR  + D V++  ++   FR   A  A+ 
Sbjct: 92  EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L D M  + + P   TYN+++ GL +SG  ++A ++  E+   G+ PD  +F  +I GFC
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLS---------------------------- 368
             G++E+AL+ + +M  +  KPD+V+ + L+                             
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271

Query: 369 -------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
                  G CR G++  AL+     +  G   D VTYNTL++ LCKERRL DA GLL+EM
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331

Query: 422 EEKKLGPDRYTYAA-IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--------- 471
            E+ + PD  T+   IH   +E G+L++A +    M+   ++   +V  NT         
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIE-GKLDKALQLFDTMLNQ-RLRPDIVTYNTLIDGMCRQG 389

Query: 472 ----------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                          EI P+ ++YS  I+ HC +G+ +DA    +E   KGI  N  TY 
Sbjct: 390 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 449

Query: 522 NLMNGLIKRRKSISKA 537
           +++ G   R  ++SK 
Sbjct: 450 SIIKGYC-RSGNVSKG 464



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 21/247 (8%)

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++++ LL S   P    F+ +I  +    +  +A +    +++          N LL+ L
Sbjct: 11  EIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAAL 70

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            R G    A   +R        V++ T N ++ + CK    +    ++SEME++ + PD 
Sbjct: 71  SRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDV 130

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS--------------KTPE 476
            T+  +  A   +G  E A      MV  G +   +V  N+               +  +
Sbjct: 131 VTHNVMVDARFRAGDAEAAMALVDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 477 EID-----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           E+D     P   S++  I   C  G  ++AL+I++E R +GI  +  ++  L+ GL  RR
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARR 248

Query: 532 KSISKAV 538
             +  A+
Sbjct: 249 GKMDHAM 255


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 170/531 (32%), Positives = 279/531 (52%), Gaps = 19/531 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   ++VTY+ ++D+  ++GKL+     L  M   G+      YN L++G+CKLG L  A
Sbjct: 396 GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAA 455

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   D M      P V +Y  LI+G+CN G L EAFRL  EM    + P+  T+ TLI+ 
Sbjct: 456 VSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISA 515

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F + R  +AF+L DE+ E  + PN VT+N+MI+ +CKEG   KA +++  M + G  PD
Sbjct: 516 LFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  LI + C  G + EA + +D + R+  K+N +  + +LH  C E +L +A  +  
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              KRG  +D V Y  LI G  +++  +    L   M ++++ P    Y +MI G S++G
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAG 695

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  + + ++  G  P+  T+ T+I+  C  G ++KA     +M+  +  P+ VT  
Sbjct: 696 SVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYC 755

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L  L REG +EKA++     +LKG   ++V+YN L+   CK  R+E+A  LL EM + 
Sbjct: 756 CFLDHLAREGSMEKAVQLHND-MLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDN 814

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  TY+ I       G L+ A +F   M+  G                 + P +++
Sbjct: 815 AIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG-----------------LKPDTLA 857

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           Y+  I   C  G    A ++ ++  ++G+  N++T+ +L +G   R+ SIS
Sbjct: 858 YNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG-ASRKFSIS 907



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/528 (30%), Positives = 268/528 (50%), Gaps = 18/528 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V YN ++  L K  ++ E  ++ + + ++GL  +  TY  LV G CK+   +    V+D 
Sbjct: 262 VVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDE 321

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +   +P     + L+ G    G + +AF L   ++ +  +P +  YN LIN   + G+
Sbjct: 322 MIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK 381

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA  L  E+ E G+  N VT++I+I  +C+ GK+D A   +  M   G       YN+
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+ +CK GN+  A    D M  KGLK   ++  +++   C + KL EA+ L +  + +G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  ++ TLI+  FR  +   A +L+DEM E+ +MP+  TYN MI G  + G T +A 
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAF 561

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++LN+++Q G++PD  T+  +I   CS G+V +A +F + +  + FK + +  + LL G 
Sbjct: 562 ELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGY 621

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+EG L  AL   R  + +G  +D V Y  LI    KE+     FGLL  M +++L PD+
Sbjct: 622 CKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDK 681

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y ++     ++G +++A     IM++ G                   P+ ++Y+  IN
Sbjct: 682 VIYTSMIDGYSKAGSVKKAFGIWDIMIDEG-----------------CTPNIVTYTTLIN 724

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           E C  G    A  +++E        N  TY   ++ L  R  S+ KAV
Sbjct: 725 ELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHL-AREGSMEKAV 771



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 216/401 (53%), Gaps = 1/401 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+  T+ T++ ALF+  ++ +   L  +M +Q ++PN  TYN+++ G+CK G 
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +++ M Q   +PD +TY  LI+  C+ G + EA +   ++       + + Y+ 
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ + + GR  +A  +  E+ + G+  + V + ++I    KE        +++NM +  
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y ++ID   KAG++++AF + D+M  +G   N +T  T+++ LC    +D+A 
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +L           + V+Y   +    R+    +A++L ++M  + ++ +T +YN ++ G 
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGF 795

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E+A  +L+E++ + + PD  T++TII+  C  G ++ A++F + M+ K  KPD 
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           +  N L+ G C  G L KA +     I +G   +  T+ +L
Sbjct: 856 LAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/557 (24%), Positives = 267/557 (47%), Gaps = 56/557 (10%)

Query: 14  NTILDALFKKGKLN--EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +++L  L  +G L+  EV + L D  ++    +   +++L+  Y +   + +++ +  LM
Sbjct: 125 SSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLM 184

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            Q + +P V T   ++NG      ++    L  E+ S+ + PD+  Y  +I  F E    
Sbjct: 185 RQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNF 244

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A ++I  ++   +  N V +N++I   CK  ++ +A +I   + + G +   VTY TL
Sbjct: 245 AKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTL 302

Query: 192 IDANCK-------AGNMEE----------------------------AFRMMDVMGRKGL 216
           +   CK       AG M+E                            AF +++ + + G 
Sbjct: 303 VLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGA 362

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             +    N ++++LC + K DEA +L     ++G   ++V+Y  LI  + R  K + A+ 
Sbjct: 363 MPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIH 422

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
              +M    I  + + YN++I G  + G    A+   +E++  G+ P   ++ ++I G+C
Sbjct: 423 FLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYC 482

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           ++G++ +A + +++M  K   P+  T   L+S L R   +  A + F   + +    + V
Sbjct: 483 NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV 542

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN +I   CKE     AF LL++M +K L PD YTY  + ++L  +GR+ EA+KF   +
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
                  H+          E    + + YS  ++ +C +GR +DAL +  E  ++G+ ++
Sbjct: 603 -------HR----------EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645

Query: 517 KSTYMNLMNGLIKRRKS 533
              Y  L++G IK + +
Sbjct: 646 LVCYAVLIDGTIKEQDT 662


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 155/459 (33%), Positives = 252/459 (54%), Gaps = 6/459 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYNT++D+L K G L E R L   M  +G VPN  TY++L++G CK+G + EA  +
Sbjct: 114 PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 173

Query: 68  VDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEME--SLKLLPDVVTYNTLIN 123
           +  MT+     LP++ TYN  ++G C   M  EA  L + +   SL++ PD VT++TLI+
Sbjct: 174 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 233

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G++ EA    D++   G  PN VT+N ++   CK  K+++A  ++ +M + G +P
Sbjct: 234 GLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTP 291

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY+ L+DA CKA  ++EA  ++  M  +G   N +T N+I+  LC   +  EA+ + 
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIA 351

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                R    D+V++  LI G  +     +A  L++EM  + + P   T+ A+I GL ++
Sbjct: 352 LQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKA 411

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E A D+L+ +   G+ P+  T+N ++HG C  G++E+  +F  +MV     P+ +T 
Sbjct: 412 GQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTY 471

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+  LCR    + AL+        G   D+VTYN L+  L K  + E A  +L EM  
Sbjct: 472 GSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVG 531

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           K   PD +T+AA    L  SG L    +   +++  G +
Sbjct: 532 KGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGML 570



 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 162/525 (30%), Positives = 278/525 (52%), Gaps = 23/525 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYNTI++ L K  +L    +L  ++ K+G  P+  TYN L+   CK G L+EA
Sbjct: 76  GVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEA 135

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
            R+   M+    +P+V TY++LING C  G ++EA  L +EM  +S  +LP+++TYN+ +
Sbjct: 136 RRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 195

Query: 123 NRFFESGRSMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +   +   + EA +L+  L +  ++  P+ VT + +I   CK G+ D+AC    +M   G
Sbjct: 196 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGG 253

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ VTYN L++  CKA  ME A  M++ M  KG+  + IT + ++   C   ++DEA 
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+  + RG   + V++ ++I G  + +++  A ++  ++  R ++P   T+N +I G 
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  EQA  +  E++   M PD  TF  +I G C  GQVE A    + M      P++
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 433

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L+ GLC+ G +E+  +F    +  G   +S+TY +L+ +LC+  R +DA  L+S+
Sbjct: 434 VTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSK 493

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           ++     PD  TY  +   L +SG+ E+A      MV  G   HQ              P
Sbjct: 494 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG---HQ--------------P 536

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            S +++         G     +++      KG+  + +T  ++++
Sbjct: 537 DSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 264/520 (50%), Gaps = 24/520 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLL-SDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           YN +L +L + G+     ++   +M + G+ P   TYN +++G CK   L   M + + +
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    PDV TYN LI+  C AG LEEA RL   M S   +P+VVTY+ LIN   + GR 
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 132 MEAFKLIDELDEHG--IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--SPDCVT 187
            EA +LI E+      + PN +T+N  +   CK+    +AC+++R++ +     SPD VT
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++TLID  CK G  +EA    D M   G   N +T N +++ LC   K++ A+ ++ S  
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D ++Y  L+  + +  + + AL+L   M  R   P+  T+N++I GL +S ++ 
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +  ++    ++PD+ TFN +I G C  G  E+A     +MV K+ +PD++T   L+
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G +E A          G   + VTYN L+  LCK  R+E+    L EM      
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  TY ++  AL  + R ++A +  S +   G                  DP +++Y+ 
Sbjct: 466 PESMTYGSLVYALCRASRTDDALQLVSKLKSFG-----------------WDPDTVTYNI 508

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++     G+ + A+ + EE   KG   +  T+     GL
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGL 548



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 245/491 (49%), Gaps = 24/491 (4%)

Query: 48  YNILVSGYCKLGWLKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           YNI++   C+ G    A+ +    M ++   P + TYN +ING C +  L     L +E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
                 PDVVTYNTLI+   ++G   EA +L   +   G  PN VT++++I   CK G+I
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 167 DKACKIVRNMEENGFS--PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM--NTIT 222
           D+A ++++ M        P+ +TYN+ +D  CK     EA  +M  +    L++  +T+T
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            +T++  LC   + DEA    +     GY  + V+Y  L+ G  + +K  RA  + + M 
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           ++ + P   TY+ ++    ++ + ++A+++L+ +   G  P+  TFN+II G C   +  
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +A Q   ++  +   PD VT NIL++G C+ G  E+A   F   + K    D +T+  LI
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             LCK  ++E A  +L  M    + P+  TY  +   L +SGR+EE  +F   MV +G +
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                            P S++Y   +   C   R  DALQ+  + +  G   +  TY  
Sbjct: 466 -----------------PESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508

Query: 523 LMNGLIKRRKS 533
           L++GL K  K+
Sbjct: 509 LVDGLWKSGKT 519



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 138/262 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VT+N+I+D L K  +  E   +   +  + LVP++ T+NIL++G CK G 
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  + + M      PDV T+  LI+G C AG +E A  +   M +L + P+VVTYN 
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   +SGR  E  + ++E+   G  P ++T+  ++   C+  + D A ++V  ++  G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD VTYN L+D   K+G  E+A  +++ M  KG + ++ T       L     L    
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558

Query: 241 MLLNSASKRGYYLDEVSYGTLI 262
            LL     +G   D  +  +++
Sbjct: 559 ELLRVVLAKGMLPDATTCSSIL 580



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 67/123 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+++TY +++ AL +  + ++   L+S +K  G  P+  TYNILV G  K G 
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A+ V++ M      PD +T+     G   +G L     L + + +  +LPD  T ++
Sbjct: 519 TEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 578

Query: 121 LIN 123
           +++
Sbjct: 579 ILD 581



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL-SEMEEKKLGPDRYTYAAIHT 438
           LKFF    ++  +     YN ++ SLC+      A  +   EM    + P   TY  I  
Sbjct: 33  LKFF---FVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIIN 89

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L +S  L    +    +V+ G                   P  ++Y+  I+  C  G  
Sbjct: 90  GLCKSNELGAGMELFEELVKRGH-----------------HPDVVTYNTLIDSLCKAGDL 132

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++A ++      +G   N  TY  L+NGL K
Sbjct: 133 EEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 160/529 (30%), Positives = 285/529 (53%), Gaps = 17/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  TY+T+++A  K  + +  + +L +M+++G   N  TYN+L++G C+ G 
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA      M     +PD +TY  LING C +    EA  L  EM   +L P+VV Y  
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   G + EAFK+I E+   G++PN +T++ +++  CK G++D+A  +++ M  + 
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TYN +I+ + +  N ++AFR++  M   G+  N  T + ++H LC   + ++A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   + +G   +   Y  LI+GY R+   + A +++D+M +  ++P  + YN++I+GL
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+ E++     ++ + G++P+E T++ +IHG+   G +E A Q   +M++   KP+ 
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 467

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    LL    +   +EK    F+S + +G  +D+  Y  LI +L     +E AF +LSE
Sbjct: 468 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE 527

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +E+    PD + Y+++ + L ++   E+A      M + G                 +DP
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG-----------------VDP 570

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + + Y+  I+  C  G    A  +F     KG+  N  TY +L++G  K
Sbjct: 571 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 619



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 259/520 (49%), Gaps = 18/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y  ++D   ++G  +E   ++ +M   G+ PN+ TY+ LV G CK+G +  A  +
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M ++   PD  TYN++I G       ++AFRL  EME+  + P+V TY+ +I+   +
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG   +A  L++E+   G+KPNA  +  +I  YC+EG +  AC+I   M +    PD   
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI    K G +EE+ +    M  +GL  N  T + ++H       L+ A  L+    
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   ++V Y  L+  YF+ +   +    +  M ++ +M     Y  +I  LS SG  E
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L+E+ ++G +PD   ++++I G C     EKA    ++M +K   P+IV  N L+
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G +  A   F S + KG   + VTY +LI   CK   + +AF L +EM    + 
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 639

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD + Y+ + T    +G LE+A      M   G   H  +                S++ 
Sbjct: 640 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG---HASIS---------------SFNN 681

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++  C +G+ ++ L++      +G+  N  T  N+++GL
Sbjct: 682 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 721



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 275/536 (51%), Gaps = 9/536 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TYN I++  F+     +   LLS+M+  G+ PN  TY+I++ G C+ G  ++A  +
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ MT     P+ + Y  LI+G+C  G +  A  +  +M  + +LPD+  YN+LI    +
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  E+ K   ++ E G+ PN  T++ +I  Y K G ++ A ++V+ M + G  P+ V 
Sbjct: 410 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+++  K+ ++E+       M  +G+ ++      ++H L     ++ A+ +L+   
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   D   Y +LI+G  +     +A  + DEM ++ + P+   YNA+I GL +SG   
Sbjct: 530 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 589

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++ N +L  G++P+  T+ ++I G C  G +  A   +N+M+     PD    ++L 
Sbjct: 590 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 649

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +G    G LE+A+       L+G A  S ++N L+   CK  ++++   LL  +  + L 
Sbjct: 650 TGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLV 708

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVE-TGKINHQVVQPNTSKTPEEIDPSSIS-- 484
           P+  T   I + L E+G+L E     +I VE   K +    +  +S   + I+   I   
Sbjct: 709 PNALTIENIISGLSEAGKLSEVH---TIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 765

Query: 485 -YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              + I +HC +G    AL + +    K   +  S+Y+ +++ L ++ K +S+A++
Sbjct: 766 VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGK-LSEALN 820



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 244/521 (46%), Gaps = 56/521 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY+ ++  L + G+  +  DLL +M  +GL PN   Y  L+SGYC+ G 
Sbjct: 318 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 377

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + D MT+   LPD++ YN LI G    G +EE+ +   +M+   LLP+  TY+ 
Sbjct: 378 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 437

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK------------ 168
           LI+ + ++G    A +L+  + + G+KPN V +  +++ Y K   I+K            
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497

Query: 169 -----------------------ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                                  A +++  +E+NG  PD   Y++LI   CK  + E+AF
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++D M +KG+  N +  N ++  LC    +  A  + NS   +G   + V+Y +LI G 
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +    + A  L++EM    I P  F Y+ +  G S +G  EQA+ ++ E+   G     
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASI 676

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL--------- 376
           ++FN ++ GFC  G++++ L+  + ++ +   P+ +T   ++SGL   G L         
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736

Query: 377 ------EKALKFFRSWIL----KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
                 E A + F S  +    +GK    V  + +I   CKE  L+ A  L   +  K  
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVIVAKSA 795

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
                +Y AI   L   G+L EA      M + G +   +V
Sbjct: 796 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLV 836



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 24/176 (13%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV---- 67
           ++N ++D   K+GK+ E   LL  +  +GLVPN  T   ++SG  + G L E   +    
Sbjct: 678 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 737

Query: 68  ----------------VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
                           +D++ Q K   DV   + +I   C  G L++A  LR  + +   
Sbjct: 738 QQKTSESAARHFSSLFMDMINQGKIPLDV--VDDMIRDHCKEGNLDKALMLRDVIVAKSA 795

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKI 166
                +Y  +++     G+  EA  L+ E+D+ G ++P  V   + I W+ +   I
Sbjct: 796 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVAL-LGIFWFRRHHHI 850



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 60/212 (28%)

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
              + ++  +   G+V+ A +    M ++   P I  CN LL  L R             
Sbjct: 48  AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRA------------ 95

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG----PDRYTYAAIHTALV 441
                                      DA  LL ++ E  +G    PD YTY+ +  A  
Sbjct: 96  ---------------------------DAMALLWKVREFMVGAGISPDVYTYSTLIEAYC 128

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           +    + A+K    M E G                    ++++Y+  I   C  G  ++A
Sbjct: 129 KVREFDTAKKVLVEMRERG-----------------CGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
               ++    G+  +  TY  L+NGL K R+S
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 203


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  290 bits (743), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 160/451 (35%), Positives = 248/451 (54%), Gaps = 7/451 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           CLP  VTY  ++D L K G+L+E   +L  M ++G  P   TY +++ G  K G ++EA 
Sbjct: 73  CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 132

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK----LLPDVVTYNTL 121
           R+   M  N   PD + Y  LI G C +G  EEA+ L KE  + K     +PDVVTY +L
Sbjct: 133 RIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSL 192

Query: 122 INRFFESGRSMEAFKLID-ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I+   ++GR +EA ++ D E  E G  P+AVT+  +I   CK G++++ C+    M   G
Sbjct: 193 IDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 252

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD VTY  LID   KA  + +A R+   M + G  ++T+T N IL  LC   ++ EAY
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
               +  +RG     V+Y  L+ G+  +   + A++L+  M +R   P+  +YN +I GL
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 372

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE-GQVEKALQFHNKMVEKSFKPD 359
            ++GK  +A     +LLQ  + PD  TFN  +HG C     V   ++    MV +   P+
Sbjct: 373 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPN 432

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + + +IL+ G+CR G LE AL+ FR  + +G A D V +NTLI  LC   R+++A  +  
Sbjct: 433 LHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFR 492

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
           E+E +   PD ++Y ++   L    R+EEA+
Sbjct: 493 ELERRS-APDAWSYWSLLDGLSRCERMEEAR 522



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 267/528 (50%), Gaps = 24/528 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD V +  +++ L ++ +L+E   +L    + G  P+  TYN+ + G CK   + +A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +++  M + K LP   TY  L++G   AG L+EA  + ++M      P + TY  +I+  
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--- 182
            ++GR  EA ++  ++  +G +P+A  +  +IK  CK GK ++A  + +           
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 183 -PDCVTYNTLIDANCKAGNMEEAFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAY 240
            PD VTY +LID  CKAG + EA ++ D     +G   + +T  +I+  LC   +++E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +    RGY  D V+Y  LI G+ + +   +A +++ +M +   + ST TYN ++ GL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+  +A      + + G +    T++ ++ GFCSEG V  A++   +M+++  +P++
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE-RRLEDAFGLLS 419
           V+ NI++ GLCR G L KA  +F   + +    D  T+N  +  LC+    + D   L  
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFE 422

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M  +   P+ ++Y+ +   +  +G LE A +    MV  G                 + 
Sbjct: 423 SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG-----------------VA 465

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           P  + ++  I   C  GR  +AL++F E  ++  A +  +Y +L++GL
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGL 512



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 207/432 (47%), Gaps = 22/432 (5%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD+V +  +IN      R  EAF +++     G +P+ VT+N+ I   CK  ++D A ++
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           ++ M+E    P  VTY  L+D   KAG ++EA  +++ M  KG      T   ++  L  
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ----IMP 288
             +++EA  +       G   D   Y  LI G  +  K   A  L+ E   R+     +P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLN-ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
              TY ++I GL ++G+  +A  + + E ++ G IPD  T+ +II G C  G+VE+  + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            ++M  + ++PD VT   L+ G  +  ++ KA + +R  +  G  V +VTYN ++  LCK
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             R+ +A+     MEE+       TY+A+       G +  A +    M++ G       
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG------- 357

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                      +P+ +SY+  I   C  G+   A   FE+  Q+ +  +  T+   ++GL
Sbjct: 358 ----------CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407

Query: 528 IKRRKSISKAVD 539
            +R  ++S  V+
Sbjct: 408 CQRLDTVSDGVE 419



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 191/385 (49%), Gaps = 7/385 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ----GLVPNRTTYNILVSGYC 56
           M G GC PD   Y  ++  L K GK  E   L  +   +      VP+  TY  L+ G C
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197

Query: 57  KLGWLKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           K G + EA +V  D   +   +PD  TY  +I+G C  G +EE      EM +    PD 
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           VTY  LI+ F ++    +A ++  ++ + G   + VT+NI++   CK G++ +A      
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           MEE G     VTY+ L+D  C  GN+  A  +   M  +G + N ++ N I+  LC   K
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYF-RDEKANRALKLWDEMKERQIMPSTFTYN 294
           L +AY       +R    D  ++   + G   R +  +  ++L++ M  +   P+  +Y+
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYS 437

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ G+ ++G  E A+++  E++  G+ PD   FNT+I   C  G+V++AL+   ++ E+
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ER 496

Query: 355 SFKPDIVTCNILLSGLCREGILEKA 379
              PD  +   LL GL R   +E+A
Sbjct: 497 RSAPDAWSYWSLLDGLSRCERMEEA 521



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 139/292 (47%), Gaps = 2/292 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY  ++D   K   + +   +   M + G V +  TYNI++ G CK G 
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA      M +   +  V TY+ L++G+C+ G +  A  L + M      P++V+YN 
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE-GKIDKACKIVRNMEEN 179
           +I     +G+  +A+   ++L +  + P+  T N  +   C+    +    ++  +M   
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G SP+  +Y+ L+D  C+AG +E A  +   M  +G+  + +  NT++  LC   ++DEA
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
             +     +R    D  SY +L+ G  R E+   A  L   MK +   P  +
Sbjct: 488 LEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHY 538


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/522 (30%), Positives = 271/522 (51%), Gaps = 19/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN ++D L K  K ++  ++L +M  +G+ P+  T+N ++ G CK G  + A  +
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M +    P   TYN LI+G C    ++ A  L  E  S   +PDVVTY+ L +   +
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  EAF+L+ E+  +G  PN VT+N +I   CK  K +KA +++  +  +GF PD VT
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  ++D  CK G +++A +M++ M ++G   + IT   ++  LC   ++DEA+ +     
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +    D ++Y +L+ GY +  +   A K+ D ++     P    YNA++ G  + G+ +
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLD 304

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +  ++  ++   G +P+  T+N ++ G C  G+V++A  F   M      PD+V+ NI++
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL +    ++A +     I  G   D+VTYNTL++  CKE R +DA G+L  M +  + 
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 424

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  + + L ++ RL +A +    M+  G     VV   T            +Y+ 
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG----CVVSACT------------TYNT 468

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+  C +G  K AL + +     G+  N  TY   ++ L K
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 510



 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 174/530 (32%), Positives = 277/530 (52%), Gaps = 32/530 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC P+ VTYNT++D L K  K  +  +LL  +   G VP+  TY I+V G CK G 
Sbjct: 141 MSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGR 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+++V+ M +    P V TY  L+ G C  G ++EA  + KEM S     D + Y +
Sbjct: 201 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           L+N + +S R+ EA K++D     GI+  P    +N ++  YCKEG++D+   +  +M  
Sbjct: 261 LVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC 315

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TYN ++D  CK G ++EAF  ++ M   G   + ++ N I+  L    K  E
Sbjct: 316 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 375

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +L+   + G   D V+Y TL+  + ++E+ + A+ +   M +  + P   TYN +I 
Sbjct: 376 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 435

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDE-TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           GLSQ+ +   A ++++E+L++G +    TT+NTII   C EG +++AL   + M     +
Sbjct: 436 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 495

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            + VT NI +  LC+EG L++A              D V+Y T+I  LCK  +L+ A  L
Sbjct: 496 ANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKL 552

Query: 418 LSEM-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP- 475
             EM   K L    +T+  +  A  ++ RL+EA     +MV+ G  +  V+  N   T  
Sbjct: 553 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG-CSPSVITYNMVITCL 611

Query: 476 ---EEID---------------PSSISYSEKINEHCSQGRYKDALQIFEE 507
              +++D                SS+SY+  I   C QGR K+ALQ+ EE
Sbjct: 612 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEE 661



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/505 (31%), Positives = 267/505 (52%), Gaps = 23/505 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT+N+I+D L K GK      LL+ M ++   P+  TYN L+SG CK   +  A
Sbjct: 40  GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +VD    +  +PDV TY++L +G C  G ++EAF L KEM      P++VTYNTLI+ 
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDG 159

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++ ++ +A++L++ L   G  P+ VT+ I++   CKEG++DKA K+V  M + G +P 
Sbjct: 160 LCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 219

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY  L++  C+ G ++EA  +   M  K    + +   ++++  C   +  EA  +++
Sbjct: 220 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279

Query: 245 SASKRGY-YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               RG  Y+D   Y  L+ GY ++ + +    ++++M  R  +P+  TYN ++ GL + 
Sbjct: 280 GI--RGTPYID--VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 335

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK ++A   L  +  +G +PD  ++N II G     + ++A Q  ++M++    PD VT 
Sbjct: 336 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTY 395

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM-E 422
           N L++  C+E   + A+   ++ I  G   D+VTYNTLIS L +  RL DA+ L+ EM  
Sbjct: 396 NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLR 455

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              +     TY  I   L + G L++A      M   G      V+ NT           
Sbjct: 456 NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG------VEANT----------- 498

Query: 483 ISYSEKINEHCSQGRYKDALQIFEE 507
           ++Y+  I+  C +GR  +A  +  E
Sbjct: 499 VTYNIFIDRLCKEGRLDEASSLLSE 523



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 238/457 (52%), Gaps = 20/457 (4%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M + K  PDV+TYN+LI+G C A   ++A  +  EM    + PD VT+N++++   ++G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  L+  + E   +P+  T+N +I   CK+  +D+A  +V     +GF PD VTY+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L D  CK G ++EAF ++  M   G   N +T NT++  LC   K ++AY LL +    G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           +  D V+Y  ++ G  ++ + ++ALK+ + M +R   PS  TY A++ GL ++G+ ++A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  E++      D   + ++++G+C   + ++A +  + +      P I   N L+ G 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGY 297

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+EG L++    F     +G   +  TYN ++  LCK  ++++AF  L  M      PD 
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            +Y  I   L ++ + +EA++    M++ G                 I P +++Y+  + 
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAG-----------------IPPDAVTYNTLMA 400

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           + C + R+ DA+ I +   + G+  +  TY  L++GL
Sbjct: 401 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 243/482 (50%), Gaps = 37/482 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TY  +++ L + G+++E   +  +M  +    +   Y  LV+GYCK    KEA
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 274

Query: 65  MRVVDL--------------------------------MTQNKSLPDVWTYNMLINGWCN 92
            +VVD                                 M     +P++ TYN++++G C 
Sbjct: 275 QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G ++EAF   + M S   +PDVV+YN +I+  F++ +  EA +++D++ + GI P+AVT
Sbjct: 335 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 394

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N ++  +CKE + D A  I++NM + G  PD VTYNTLI    +   + +A+ +M  M 
Sbjct: 395 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454

Query: 213 RKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
           R G  ++  T  NTI+  LC E  L +A +L++  +  G   + V+Y   I    ++ + 
Sbjct: 455 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 514

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ-SGMIPDETTFNT 330
           + A  L  EM     +    +Y  +I GL ++ + ++A  +  E++   G+     TFN 
Sbjct: 515 DEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNL 571

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I  F    ++++AL     MV++   P ++T N++++ LC+   ++KA + F    ++G
Sbjct: 572 LIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRG 631

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
               SV+Y  LI  LC + R ++A  +L EM       D      ++ AL   GR EEA 
Sbjct: 632 IVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAA 691

Query: 451 KF 452
           + 
Sbjct: 692 EL 693



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 204/424 (48%), Gaps = 49/424 (11%)

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           ++E  + P+  T+NI+I   CK  K DKA +++  M + G +PD VT+N+++D  CKAG 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
            E A  ++ VM  +  + +  T NT++  LC ++ +D A  L++     G+  D V+Y  
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L  G  +  + + A +L  EM      P+  TYN +I GL ++ KTE+A ++L  L+ SG
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            +PD  T+  I+ G C EG+++KAL+    M+++   P ++T   L+ GLCR G +++A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 381 KFFRSWILKG-------------------------KAVDSV-------TYNTLISSLCKE 408
             F+  + K                          K VD +        YN L+   CKE
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            RL++   +  +M  +   P+  TY  +   L + G+++EA  F   M   G +      
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV------ 354

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P  +SY+  I+      + K+A Q+ ++  Q GI  +  TY  LM    
Sbjct: 355 -----------PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403

Query: 529 KRRK 532
           K  +
Sbjct: 404 KEER 407



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 194/356 (54%), Gaps = 5/356 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V+YN I+D LFK  K  E R +L  M + G+ P+  TYN L++ +CK   
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
             +A+ ++  M +    PD  TYN LI+G      L +A+ L  EM  +  ++    TYN
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+I+R  + G   +A  L+D +  HG++ N VT+NI I   CKEG++D+A  ++  M+  
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT- 526

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               D V+Y T+I   CKA  ++ A ++  +++  KGL + + T N ++      K+LDE
Sbjct: 527 --LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 584

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  LL    +RG     ++Y  +IT   + +K ++A +L+DEM  R I+ S+ +Y  +I+
Sbjct: 585 ALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 644

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           GL   G+ ++A+ +L E+  S    D+     +      +G+ E+A +   +M  K
Sbjct: 645 GLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 144/288 (50%), Gaps = 19/288 (6%)

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D  +Y  LI G  +  K ++A ++  EM +R + P T T+N+++ GL ++GK E+A  +L
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             + +    P   T+NT+I G C +  V++A    ++ V   F PD+VT +IL  GLC+ 
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G +++A +  +     G   + VTYNTLI  LCK  + E A+ LL  +      PD  TY
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             I   L + GRL++A K    M++ G                   PS I+Y+  +   C
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRG-----------------CTPSVITYTALMEGLC 231

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK--RRKSISKAVD 539
             GR  +A  IF+E   K    +   Y++L+NG  K  R K   K VD
Sbjct: 232 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%)

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M E+   PD+ T NIL+ GLC+    +KA +     + +G   D+VT+N+++  LCK  +
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
            E A  LL+ M E+   P   TY  + + L +   ++ A+      V +G +        
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV-------- 112

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                    P  ++YS   +  C +GR  +A ++ +E    G   N  TY  L++GL K 
Sbjct: 113 ---------PDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKA 163

Query: 531 RKS 533
            K+
Sbjct: 164 SKT 166


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 168/554 (30%), Positives = 286/554 (51%), Gaps = 25/554 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD    + ++D   ++G ++EV  +   M   G+  N  TYN+L+ G CK G 
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  ++  M      P+  T+ +LI G+C    +  A  L  EME   L+P  V+Y  
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN          A KL++++   G+KPN V ++I+I  Y  EG+I++A +++  M  +G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFR-MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            +PD   YN +I    KAG MEEA   ++++ GR GLK + +T    +       K+ EA
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR-GLKPDAVTFGAFILGYSKTGKMTEA 562

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               +     G   +   Y  LI G+F+      AL ++  +    ++P   T +A I G
Sbjct: 563 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+ ++A+ + +EL + G++PD  T++++I GFC +G+VEKA + H++M  K   P+
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   N L+ GLC+ G +++A K F     KG   DSVTY+T+I   CK   + +AF L  
Sbjct: 683 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG------------------K 461
           EM  K + P  + Y A+     + G +E+A      M++ G                  K
Sbjct: 743 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK 802

Query: 462 INH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           I    Q+ Q   +K   +I P  ++Y+  I+ HC  G+ ++A  +F+E +++ + ++  T
Sbjct: 803 IQEASQLFQEMIAK---QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859

Query: 520 YMNLMNGLIKRRKS 533
           Y +LM G  K  +S
Sbjct: 860 YTSLMYGYNKLGQS 873



 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 289/555 (52%), Gaps = 20/555 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P++ T+  +++   ++  +    +LL +M+K+ LVP+  +Y  +++G C    
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 453

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A ++++ MT +   P+V  Y++LI  + + G +EEA RL   M    + PD+  YN 
Sbjct: 454 LSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 513

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++G+  EA   + E+   G+KP+AVT    I  Y K GK+ +A K    M ++G
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+   Y  LI+ + KAGN+ EA  +   +   G+  +  T +  +H L    ++ EA 
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   ++G   D  +Y +LI+G+ +  +  +A +L DEM  + I P+ F YNA++ GL
Sbjct: 634 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG  ++A  + + + + G+ PD  T++T+I G+C    V +A    ++M  K  +P  
Sbjct: 694 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 753

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N L+ G C+EG +EKA+  FR  + KG A  ++++NTLI   CK  ++++A  L  E
Sbjct: 754 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQE 812

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQ----------------KFTSIMVETGKINH 464
           M  K++ PD  TY  +     ++G++EEA                  +TS+M    K+  
Sbjct: 813 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 872

Query: 465 --QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
             +V         + + P  ++Y   I  HC +    +A ++ +E   KG+ + K T  +
Sbjct: 873 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM-LTKGTIHD 931

Query: 523 LMNGLIKRRKSISKA 537
           L+   + +R+ +++A
Sbjct: 932 LLITALCKREDLTEA 946



 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 150/451 (33%), Positives = 241/451 (53%), Gaps = 1/451 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++G G  PD VT+   +    K GK+ E      +M   GL+PN   Y +L++G+ K G 
Sbjct: 534 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 593

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +   +     LPDV T +  I+G    G ++EA ++  E++   L+PDV TY++
Sbjct: 594 LMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 653

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   +AF+L DE+   GI PN   +N ++   CK G I +A K+   M E G
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY+T+ID  CK+ N+ EAF +   M  KG++ ++   N ++H  C E  +++A 
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 773

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++G+    +S+ TLI GY +  K   A +L+ EM  +QIMP   TY  +I   
Sbjct: 774 NLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 832

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK E+A  +  E+ +  +I D  T+ ++++G+   GQ  +      KMV K  KPD 
Sbjct: 833 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 892

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +++   C+E  L +A K     + KG       ++ LI++LCK   L +A  LL E
Sbjct: 893 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 952

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           M E  L P       +  +  E+G+++EA +
Sbjct: 953 MGELGLKPSLAACNTLVRSFHEAGKMDEATR 983



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 266/526 (50%), Gaps = 26/526 (4%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD   YN I+  L K GK+ E    L +++ +GL P+  T+   + GY K G + EA
Sbjct: 503  GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +  D M  +  +P+   Y +LING   AG L EA  + + + +L +LPDV T +  I+ 
Sbjct: 563  AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              ++GR  EA K+  EL E G+ P+  T++ +I  +CK+G+++KA ++   M   G +P+
Sbjct: 623  LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               YN L+D  CK+G+++ A ++ D M  KGL+ +++T +T++   C  + + EA+ L +
Sbjct: 683  IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                +G       Y  L+ G  ++    +A+ L+ EM ++    +T ++N +I G  +S 
Sbjct: 743  EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 801

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            K ++A  +  E++   ++PD  T+ T+I   C  G++E+A     +M E++   D VT  
Sbjct: 802  KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L+ G  + G   +    F   + KG   D VTY  +I + CKE  L +AF L  E+   
Sbjct: 862  SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV--- 918

Query: 425  KLGPDRYTYAAIH----TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
             +G    T   IH    TAL +   L EA K    M E G                 + P
Sbjct: 919  -VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG-----------------LKP 960

Query: 481  SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            S  + +  +      G+  +A ++FE  +  G+  + +T ++L+NG
Sbjct: 961  SLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 269/556 (48%), Gaps = 52/556 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TY  ++ AL K G L   + +L +M ++GL PN   Y++++ G C++G + EA+ + 
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M +   +P+ +TY ++  G C A  + EA    +EM+   L PD    + LI+ F   
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   E  ++ D +   GI  N +T+N++I   CK GK++KA +I++ M   G  P+  T+
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LI+  C+  NM  A  ++D M ++ L  + ++   +++ LC  K L  A  LL   + 
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 466

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   + V Y  LI  Y  + +   A +L D M    + P  F YNA+I  LS++GK E+
Sbjct: 467 SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS------------- 355
           A   L E+   G+ PD  TF   I G+   G++ +A ++ ++M++               
Sbjct: 527 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 586

Query: 356 --FK--------------------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
             FK                    PD+ TC+  + GL + G +++ALK F     KG   
Sbjct: 587 GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D  TY++LIS  CK+  +E AF L  EM  K + P+ + Y A+   L +SG ++ A+K  
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M E G                 ++P S++YS  I+ +C      +A  +F E   KG+
Sbjct: 707 DGMPEKG-----------------LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 749

Query: 514 AINKSTYMNLMNGLIK 529
             +   Y  L++G  K
Sbjct: 750 QPHSFVYNALVHGCCK 765



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 224/421 (53%), Gaps = 1/421 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            +   G LPD  T +  +  L K G++ E   + S++K++GLVP+  TY+ L+SG+CK G 
Sbjct: 604  LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +++A  + D M      P+++ YN L++G C +G ++ A +L   M    L PD VTY+T
Sbjct: 664  VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +I+ + +S    EAF L  E+   G++P++  +N ++   CKEG ++KA  + R M + G
Sbjct: 724  MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            F+   +++NTLID  CK+  ++EA ++   M  K +  + +T  T++   C   K++EA 
Sbjct: 784  FATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 842

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L     +R   +D V+Y +L+ GY +  +++    L+++M  + + P   TY  +I+  
Sbjct: 843  LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 902

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +     +A  + +E++  GM+   T  + +I   C    + +A +  ++M E   KP +
Sbjct: 903  CKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSL 962

Query: 361  VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              CN L+      G +++A + F      G   D+ T   L++    +   EDA  L+ +
Sbjct: 963  AACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQ 1022

Query: 421  M 421
            +
Sbjct: 1023 L 1023



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 256/538 (47%), Gaps = 20/538 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V ++ ++D+  + G L+E  ++    K   ++ +    N L+    K G ++   +V + 
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M   K   DV+TY  L+   C  G L  A R+  EM+   L P+   Y+ +I    + G 
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA +L   + E G+ PN  T+ I+    C+  ++++A      M++ G  PD    + 
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID   + G+++E  R+ DVM   G+ +N IT N ++H LC   K+++A  +L      G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  ++  LI GY R+    RAL+L DEM++R ++PS  +Y AMI GL        A 
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L ++  SG+ P+   ++ +I  + SEG++E+A +  + M      PDI   N ++S L
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 518

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            + G +E+A  +      +G   D+VT+   I    K  ++ +A     EM +  L P+ 
Sbjct: 519 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 578

Query: 431 YTYAAIHTALVESGRLEEA-------------------QKFTSIMVETGKINHQVVQPNT 471
             Y  +     ++G L EA                     F   +++ G++  + ++  +
Sbjct: 579 PLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRV-QEALKVFS 637

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               + + P   +YS  I+  C QG  + A ++ +E   KGIA N   Y  L++GL K
Sbjct: 638 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 695



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 175/348 (50%), Gaps = 1/348 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+   YN ++D L K G +   R L   M ++GL P+  TY+ ++ GYCK   + EA
Sbjct: 678  GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 737

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +   M      P  + YN L++G C  G +E+A  L +EM   K     +++NTLI+ 
Sbjct: 738  FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-KGFATTLSFNTLIDG 796

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            + +S +  EA +L  E+    I P+ VT+  +I W+CK GK+++A  + + M+E     D
Sbjct: 797  YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 856

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             VTY +L+    K G   E F + + M  KG+K + +T   +++  C E  L EA+ L +
Sbjct: 857  TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 916

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                +G       +  LIT   + E    A KL DEM E  + PS    N ++    ++G
Sbjct: 917  EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAG 976

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
            K ++A  +   +   G++PD TT   +++G  ++   E A     ++V
Sbjct: 977  KMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 17/244 (6%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S   ++ +I    + G  ++A ++        ++      N+++      G +E   + +
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N M++     D+ T   L+  LC+ G L  A +       KG   +   Y+ +I  +C+ 
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
             +++A  L   M EK L P+ YTY  I   L  + R+ EA+     M +TG        
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG-------- 328

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + P   + S  I+    +G   + L+I +     GI IN  TY  L++GL 
Sbjct: 329 ---------LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 379

Query: 529 KRRK 532
           K  K
Sbjct: 380 KFGK 383


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 270/522 (51%), Gaps = 19/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN ++D L K  K ++  ++L +M  +G+ P+  T+N ++ G CK G  + A  +
Sbjct: 259 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 318

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M +    P   TYN LI+G C    ++ A  L  E  S   +PDVVTY+ L +   +
Sbjct: 319 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  EAF+L+ E+   G  PN VT+N +I   CK  K +KA +++ ++  +GF PD VT
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  ++D  CK G +++A +M++ M ++G   + IT   ++  LC   ++DEA+ +     
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +    D ++Y +L+ GY +  +   A K+ D ++     P    YNA++ G  + G+ +
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLD 555

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +  ++  ++   G +P+  T+N ++ G C  G+V++A  F   M      PD+V+ NI++
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL +    ++A +     I  G   D+VTYNTL++  CKE R +DA G+L  M +  + 
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 675

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  + + L ++ RL +A +    M+  G +                  +  +Y+ 
Sbjct: 676 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS----------------ACTTYNT 719

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+  C +G  K AL + +     G+  N  TY   ++ L K
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 170/531 (32%), Positives = 274/531 (51%), Gaps = 29/531 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC P+ VTYNT++D L K  K  +  +LL  +   G VP+  TY I+V G CK G 
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+++V+ M +    P V TY  L+ G C  G ++EA  + KEM S     D + Y +
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           L+N + +S R+ EA K++D     GI+  P    +N ++  YCKEG++D+   +  +M  
Sbjct: 512 LVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC 566

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TYN ++D  CK G ++EAF  ++ M   G   + ++ N I+  L    K  E
Sbjct: 567 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 626

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +L+   + G   D V+Y TL+  + ++E+ + A+ +   M +  + P   TYN +I 
Sbjct: 627 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 686

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDE-TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           GLSQ+ +   A ++++E+L++G +    TT+NTII   C EG +++AL   + M     +
Sbjct: 687 GLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 746

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            + VT NI +  LC+EG L++A              D V+Y T+I  LCK  +L+ A  L
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKL 803

Query: 418 LSEM-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
             EM   K L    +T+  +  A  ++ RL+EA     +MV+ G                
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG---------------- 847

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              PS I+Y+  I   C   +   A ++F+E   +GI  +  +Y  L+ GL
Sbjct: 848 -CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 897



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 277/555 (49%), Gaps = 53/555 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+ TY+ ++ +L +  ++++   +L   K +G  P  + Y IL   +CK G LK+A
Sbjct: 155 GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA 214

Query: 65  MRV-------------------------------VDLMTQNKSLPDVWTYNMLINGWCNA 93
           + +                               +  M + K  PDV+TYN+LI+G C A
Sbjct: 215 LEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKA 274

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
              ++A  +  EM    + PD VT+N++++   ++G+   A  L+  + E   +P+  T+
Sbjct: 275 SKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTY 334

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N +I   CK+  +D+A  +V     +GF PD VTY+ L D  CK G ++EAF ++  M  
Sbjct: 335 NTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSG 394

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           KG   N +T NT++  LC   K ++AY LL S    G+  D V+Y  ++ G  ++ + ++
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK 454

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           ALK+ + M +R   PS  TY A++ GL ++G+ ++A  +  E++      D   + ++++
Sbjct: 455 ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVN 514

Query: 334 GFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           G+C   + ++A     K+V+     P I   N L+ G C+EG L++    F     +G  
Sbjct: 515 GYCKSSRTKEA----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCV 570

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +  TYN ++  LCK  ++++AF  L  M      PD  +Y  I   L ++ + +EA++ 
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 630

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              M++ G                 I P +++Y+  + + C + R+ DA+ I +   + G
Sbjct: 631 LDQMIQAG-----------------IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673

Query: 513 IAINKSTYMNLMNGL 527
           +  +  TY  L++GL
Sbjct: 674 VDPDNVTYNTLISGL 688



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/505 (31%), Positives = 267/505 (52%), Gaps = 23/505 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT+N+I+D L K GK      LL+ M ++   P+  TYN L+SG CK   +  A
Sbjct: 291 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 350

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +VD    +  +PDV TY++L +G C  G ++EAF L KEM      P++VTYNTLI+ 
Sbjct: 351 KDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG 410

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++ ++ +A++L++ L   G  P+ VT+ I++   CKEG++DKA K+V  M + G +P 
Sbjct: 411 LCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY  L++  C+ G ++EA  +   M  K    + +   ++++  C   +  EA  +++
Sbjct: 471 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530

Query: 245 SASKRGY-YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               RG  Y+D   Y  L+ GY ++ + +    ++++M  R  +P+  TYN ++ GL + 
Sbjct: 531 GI--RGTPYID--VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 586

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK ++A   L  +  +G +PD  ++N II G     + ++A Q  ++M++    PD VT 
Sbjct: 587 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTY 646

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM-E 422
           N L++  C+E   + A+   ++ I  G   D+VTYNTLIS L +  RL DA+ L+ EM  
Sbjct: 647 NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLR 706

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              +     TY  I   L + G L++A      M   G      V+ NT           
Sbjct: 707 NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG------VEANT----------- 749

Query: 483 ISYSEKINEHCSQGRYKDALQIFEE 507
           ++Y+  I+  C +GR  +A  +  E
Sbjct: 750 VTYNIFIDRLCKEGRLDEASSLLSE 774



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 262/553 (47%), Gaps = 53/553 (9%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N  L  L + G  + +  +   M   G  P+  TY++++   C++  + +A  ++D  
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P+V  Y +L   +C  G L++A  + + + S    PD + YN +I+        
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDC 242

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A + + E++E  + P+  T+NI+I   CK  K DKA +++  M + G +PD VT+N++
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D  CKAG  E A  ++ VM  +  + +  T NT++  LC ++ +D A  L++     G+
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V+Y  L  G  +  + + A +L  EM  +   P+  TYN +I GL ++ KTE+A +
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L  L+ SG +PD  T+  I+ G C EG+++KAL+    M+++   P ++T   L+ GLC
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 372 REGILEKALKFFRSWILKG-------------------------KAVDSV-------TYN 399
           R G +++A   F+  + K                          K VD +        YN
Sbjct: 483 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYN 542

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            L+   CKE RL++   +  +M  +   P+  TY  +   L + G+++EA  F   M   
Sbjct: 543 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 602

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G +                 P  +SY+  I+      + K+A Q+ ++  Q GI  +  T
Sbjct: 603 GCV-----------------PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 645

Query: 520 YMNLMNGLIKRRK 532
           Y  LM    K  +
Sbjct: 646 YNTLMAQFCKEER 658



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 232/451 (51%), Gaps = 37/451 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TY  +++ L + G+++E   +  +M  +    +   Y  LV+GYCK    KEA
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 525

Query: 65  MRVVDL--------------------------------MTQNKSLPDVWTYNMLINGWCN 92
            +VVD                                 M     +P++ TYN++++G C 
Sbjct: 526 QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 585

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G ++EAF   + M S   +PDVV+YN +I+  F++ +  EA +++D++ + GI P+AVT
Sbjct: 586 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 645

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N ++  +CKE + D A  I++NM + G  PD VTYNTLI    +   + +A+ +M  M 
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705

Query: 213 RKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
           R G  ++  T  NTI+  LC E  L +A +L++  +  G   + V+Y   I    ++ + 
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 765

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ-SGMIPDETTFNT 330
           + A  L  EM     +    +Y  +I GL ++ + ++A  +  E++   G+     TFN 
Sbjct: 766 DEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNL 822

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I  F    ++++AL     MV++   P ++T N++++ LC+   ++KA + F    ++G
Sbjct: 823 LIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRG 882

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
               SV+Y  LI  LC + R ++A  +L EM
Sbjct: 883 IVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 226/468 (48%), Gaps = 31/468 (6%)

Query: 94  GMLEEAFRLRKEMESLK--LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
           G+L+    +R+ +E  +  L P VV+   ++ R  +   ++  F    +    G K +  
Sbjct: 72  GLLQSGSNIRERLEQWRGTLQPAVVS--RVLQRLKDPQTAIVFFVWAGD---RGFKHSTF 126

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T N  ++   + G  D+   +   M + G++PD  TY+ +I + C+   +++AF M+D  
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             +G K        +    C   +L +A  +  +        D ++Y  +I G+ R    
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDC 242

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + AL+   EM ER++ P  FTYN +I GL ++ KT++A +ML+E++  G+ PD  TFN+I
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           + G C  G+ E+A      M E++ +P   T N L+SGLC++  +++A      ++  G 
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VTY+ L   LCK  R+++AF L+ EM  K   P+  TY  +   L ++ + E+A +
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 452 FTSIMVETGKINHQVV----------QPNTSKTPEEID--------PSSISYSEKINEHC 493
               +V +G +   V           +    K  + ++        PS I+Y+  +   C
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK--RRKSISKAVD 539
             GR  +A  IF+E   K    +   Y++L+NG  K  R K   K VD
Sbjct: 483 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 181/321 (56%), Gaps = 5/321 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V+YN I+D LFK  K  E R +L  M + G+ P+  TYN L++ +CK   
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
             +A+ ++  M +    PD  TYN LI+G      L +A+ L  EM  +  ++    TYN
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+I+R  + G   +A  L+D +  HG++ N VT+NI I   CKEG++D+A  ++  M+  
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT- 777

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               D V+Y T+I   CKA  ++ A ++  +++  KGL + + T N ++      K+LDE
Sbjct: 778 --LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  LL    +RG     ++Y  +IT   + +K ++A +L+DEM  R I+ S+ +Y  +I+
Sbjct: 836 ALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 895

Query: 299 GLSQSGKTEQAIDMLNELLQS 319
           GL   G+ ++A+ +L E+  S
Sbjct: 896 GLCGQGRGKEALQVLEEMASS 916


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 280/529 (52%), Gaps = 27/529 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++D L K+ ++ E  DL  + + +G  P   TYN ++ G CK G ++ A+ +
Sbjct: 28  PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87

Query: 68  VDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            D M  +    P V TY+ LI+G C    +++  +L +EM      P+ VTYNTL+N   
Sbjct: 88  YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN--MEENGFSPD 184
             GRS EAF L++++  +G  P  +T  ++IK  CKEG+I+ A ++V    M E+G SPD
Sbjct: 148 GQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPD 207

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N+++D  CK   + +A  +      +G + N +T +T++  L    K+DEA  LL 
Sbjct: 208 VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 267

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + V+Y T++ G  +  +   A+ +  +M++   +P   TYN +I G  +  
Sbjct: 268 KMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQ 327

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A+ +L E+L++G  P   T+ T+ HG C  G+ ++A++  + M  +   P+ +T +
Sbjct: 328 RLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYS 387

Query: 365 ILLSGLCREGILEKALKFF----RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            ++ GLC+ G + +AL +F    R  ++   A   + Y+ LI  LCK  ++++A+  L  
Sbjct: 388 SIVDGLCKAGRVTEALGYFEKMARDEVV---APHVIAYSALIDGLCKAGKIDEAYEFLER 444

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  T++ +   L ++GR++   +    M E G +                 P
Sbjct: 445 MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCV-----------------P 487

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             ++Y+  ++  C   R  +A  +F++ R  G++ ++ST   +++GL++
Sbjct: 488 DMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLE 536



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 228/417 (54%), Gaps = 3/417 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC P+ VTYNT+++AL  +G+  E   LL  M   G  P   T+ +++ G CK G 
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 61  LKEAMRVVD--LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           ++ A RVVD   M ++   PDV T+N +++G C    + +A  + K        P+VVTY
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 246

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           +TLI+   +  +  EA +L+ ++ E G + N VT++ ++    K G+++ A  ++R M +
Sbjct: 247 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 306

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD VTYNTLID   K   + EA  ++  M   G   + +T  T+ H LC   + DE
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMI 297
           A  +L+  + RG   + ++Y +++ G  +  +   AL  +++M ++  + P    Y+A+I
Sbjct: 367 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 426

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL ++GK ++A + L  ++++G IPD  TF+ +I+G C  G+++  L+    M E+   
Sbjct: 427 DGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCV 486

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           PD+VT   L+  LCR   +++A   F+     G + D  T  T+I  L +  R EDA
Sbjct: 487 PDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 231/451 (51%), Gaps = 21/451 (4%)

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           +I+G C +  +++A  L K+M    + PDVVTY  LI+   +  R  EA+ L +E    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEA 204
             P  VT+N MI   CK G+I+ A  +  +M  + GF P  VTY+TLID  C+   +++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            ++++ M  +G   N +T NT+++ L  + +  EA+ LL   +  G   + +++G +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 265 YFRDEKANRALKLWDEM--KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
             ++ +   A ++ DEM   E  + P   T+N+++ GL +  +   A ++    L+ G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T++T+I G     ++++ALQ   KMVE   + + VT + ++ GL + G +E A+  
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            R     G   D+VTYNTLI    K +RL +A GLL EM E    P   TY  +   L  
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
           SGR +EA +    M   G                   P++I+YS  ++  C  GR  +AL
Sbjct: 361 SGRFDEAVEILDYMAARG-----------------CAPNAITYSSIVDGLCKAGRVTEAL 403

Query: 503 QIFEE-TRQKGIAINKSTYMNLMNGLIKRRK 532
             FE+  R + +A +   Y  L++GL K  K
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 188/347 (54%), Gaps = 1/347 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T+N++LD L K+ ++ +  ++     ++G  PN  TY+ L+ G  K+  + EA
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++++  M +     +  TY+ +++G    G +E+A  + ++M     LPD VTYNTLI+ 
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 322

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+  R  EA  L+ E+ E G  P+ VT+  +    C+ G+ D+A +I+  M   G +P+
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            +TY++++D  CKAG + EA    + M R + +  + I  + ++  LC   K+DEAY  L
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   D V++  LI G     + +  L+L+  M ER  +P   TY  ++  L ++
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            + ++A D+  ++   G+ PD +T  T+IHG     + E A +  ++
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 4/274 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            GC  + VTY+T++D L K G++ +   +L  M+  G +P+  TYN L+ G+ K   L+E
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 331

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ ++  M +    P V TY  L +G C +G  +EA  +   M +    P+ +TY+++++
Sbjct: 332 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 391

Query: 124 RFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
              ++GR  EA    +++  +  + P+ + ++ +I   CK GKID+A + +  M   G  
Sbjct: 392 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI 451

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT++ LI+  C AG ++    +   M  +G   + +T  T++  LC   ++DEA+ L
Sbjct: 452 PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDL 511

Query: 243 LNSASKRGYYLDEVSYGTLITGYF---RDEKANR 273
                  G   D  +  T+I G     RDE A R
Sbjct: 512 FQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VT++ +++ L   G+++   +L   M ++G VP+  TY  LV   C+   + EA
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             +   M  +   PD  T   +I+G       E+A R++ E  S
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEENS 552


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 274/522 (52%), Gaps = 17/522 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  + +T+  ++D L K  +L E     + MKK+G VPN  TYN+L++G+CK+  +  A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  M ++   P+V TY+ +I+G+C    ++ A++L ++M     +P++VTYNTL++  
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +G   EA++L+DE+ E G++P+  +++ ++   CK GKID A K+  +       PD 
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+TLI   CKAG ++EA ++ + M     + + +T   ++  LC   +L EA  +L +
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              R    + ++Y +LI G  +  +   A +++  M  R I P+  TYN++I G   +  
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ ++ E+  +G +PD  T+NT+I G C  G+  +A +    M  K   PD++T + 
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C+   ++ A   F   + +    D VT++TL+   C    ++DA  LL EM    
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD YTY ++     + GR+ EA++    M + G       QPN            ++Y
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG------CQPNV-----------VTY 584

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  I+  C  G+   A ++ EE    G+  N  TY +L+ G 
Sbjct: 585 TALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF 626



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 279/539 (51%), Gaps = 17/539 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ VTY+T++    ++ K++    L   M + G +PN  TYN L+SG C+ G 
Sbjct: 187 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 246

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  ++D M +    PD ++Y+ L+ G C  G ++ A ++ ++  +    PDVV Y+T
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++GR  EA KL +++ E+  +P+ VT   ++   CK  ++ +A +++  ME+  
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ +TY++LID  CK G + +A  +   M  +G++ N +T N+++H  C    +D A 
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +L+   +  G   D ++Y TLI G  +  +A  A +L+ +MK +   P   TY+ +I G 
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + + A  + +++L+  ++PD  TF+T++ G+C+ G V+ A +   +MV     PD+
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ G C+ G + +A +  +    +G   + VTY  LI + C+  +   A+ LL E
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE 606

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    + P+  TY ++      +G LEEA+K    +                +  E    
Sbjct: 607 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL----------------ERDENCKA 650

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +Y   ++  C  GR   AL++ E  +Q G       Y+ L+ GL +  K + KA++
Sbjct: 651 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ-GKELGKAME 708



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 268/525 (51%), Gaps = 20/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  ++  L K G L++  +LL +M++ G VP+   YN ++   CK    +  
Sbjct: 54  GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKA---RNT 110

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +D     +   +V T+ ++I+G C A  L EA     +M+    +P+  TYN LIN 
Sbjct: 111 AKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLING 170

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +   A+ L+ E+ E G+ PN VT++ +I  +C++ K+D A K+ R M ENG  P+
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTL+   C+ G M+EA+ ++D M  +GL+ +  + +T++  LC   K+D A  +  
Sbjct: 231 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 290

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S      D V+Y TLI G  +  + + A KL+++M+E    P   T+ A++ GL +  
Sbjct: 291 DNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGD 350

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +L  +      P+  T++++I G C  GQV  A +   +M+ +  +P++VT N
Sbjct: 351 RLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYN 410

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C    ++ AL         G   D +TYNTLI  LCK  R  +A  L  +M+ K
Sbjct: 411 SLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              PD  TY+ +     +  R++ A+     M++                 + + P  ++
Sbjct: 471 FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLK-----------------QAVLPDVVT 513

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +S  +  +C+ G   DA ++ EE      + +  TY +L++G  K
Sbjct: 514 FSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 558



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 261/539 (48%), Gaps = 52/539 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P+ VTYNT+L  L + G ++E  +LL +M+++GL P++ +Y+ L++G CK G +  A
Sbjct: 226 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 285

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V +  +     PDV  Y+ LI G C AG L+EA +L ++M      PDVVT+  L++ 
Sbjct: 286 LKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG 345

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++++ +++    PN +T++ +I   CK G++  A ++ + M   G  P+
Sbjct: 346 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 405

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+LI   C    ++ A  +M+ M   G   + IT NT++  LC   +  EA  L  
Sbjct: 406 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 465

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +    D ++Y  LI G+ + E+ + A  L+D+M ++ ++P   T++ ++ G   +G
Sbjct: 466 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 525

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + A  +L E++ S   PD  T+ +++ GFC  G++ +A +   +M ++  +P++VT  
Sbjct: 526 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 585

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI---------------------- 402
            L+   CR G    A +     +  G   + +TY +LI                      
Sbjct: 586 ALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERD 645

Query: 403 --------------SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
                           LC+  R+  A  LL  +++    P    Y A+   L +   L +
Sbjct: 646 ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 705

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           A +    M  + K                  P++ +Y   I E   +GR+++A  + +E
Sbjct: 706 AMEVLEEMTLSRKSR----------------PNAEAYEAVIQELAREGRHEEANALADE 748



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 213/417 (51%), Gaps = 26/417 (6%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           +V TYN L      + R  E   ++      GI PN  T+ ++I+  CK G +DKAC+++
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEA---FRMMDVMGRKGLKMNTITLNTILHTL 230
             M E+G  PD   YN +I A CKA N  +A   FR M+       + N IT   ++  L
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC------EKNVITWTIMIDGL 136

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   +L EA        K+G   +E +Y  LI G+ +  K +RA  L  EMKE  + P+ 
Sbjct: 137 CKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNV 196

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TY+ +I G  +  K + A  +  +++++G +P+  T+NT++ G C  G +++A +  ++
Sbjct: 197 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 256

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M E+  +PD  + + L++GLC+ G ++ ALK F          D V Y+TLI+ LCK  R
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  L  +M E    PD  T+ A+   L +  RL+EAQ+    M +            
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED------------ 364

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                    P+ I+YS  I+  C  G+ +DA ++F+    +GI  N  TY +L++G 
Sbjct: 365 -----RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 231/455 (50%), Gaps = 20/455 (4%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           +V+TYN L      A  ++E   + K      + P+V TY  +I    +SG   +A +L+
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           +E+ E G  P+A  +N +I   CK     KA    R+ME      + +T+  +ID  CKA
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKA 139

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
             + EA      M +KG   N  T N +++  C   K+  AY+LL    + G   + V+Y
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            T+I G+ R  K + A KL+ +M E   MP+  TYN ++ GL ++G  ++A ++L+E+ +
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G+ PD+ +++T++ G C  G+++ AL+           PD+V  + L++GLC+ G L++
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A K F          D VT+  L+  LCK  RL++A  +L  ME++   P+  TY+++  
Sbjct: 320 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 379

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L ++G++ +AQ+    M+  G                 I+P+ ++Y+  I+  C     
Sbjct: 380 GLCKTGQVRDAQEVFKRMIVRG-----------------IEPNVVTYNSLIHGFCMTNGV 422

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             AL + EE    G   +  TY  L++GL K  ++
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 457



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 201/381 (52%), Gaps = 2/381 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+ +TY++++D L K G++ + +++   M  +G+ PN  TYN L+ G+C    
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +++ MT    LPD+ TYN LI+G C  G   EA RL  +M++    PDV+TY+ 
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +  R   A  L D++ +  + P+ VT + +++ YC  G +D A +++  M  + 
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  TY +L+D  CK G M EA R++  M ++G + N +T   ++   C   K   AY
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWG 299
            LL      G   + ++Y +LI G+        A K+ + + ++       F Y  M+ G
Sbjct: 602 RLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDG 661

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM-VEKSFKP 358
           L ++G+   A+++L  + QSG  P    +  +I G C   ++ KA++   +M + +  +P
Sbjct: 662 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 721

Query: 359 DIVTCNILLSGLCREGILEKA 379
           +      ++  L REG  E+A
Sbjct: 722 NAEAYEAVIQELAREGRHEEA 742



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 182/319 (57%), Gaps = 2/319 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GCLPD +TYNT++D L K G+  E   L  DMK +   P+  TY+ L+ G+CKL  
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + D M +   LPDV T++ L+ G+CNAG++++A RL +EM +    PDV TY +
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + GR +EA +++  + + G +PN VT+  +I  +C+ GK   A +++  M  NG
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEA 239
             P+ +TY +LI   C  G++EEA ++++ + R +  K +      ++  LC   ++  A
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK-ERQIMPSTFTYNAMIW 298
             LL +  + G       Y  LI G  + ++  +A+++ +EM   R+  P+   Y A+I 
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQ 731

Query: 299 GLSQSGKTEQAIDMLNELL 317
            L++ G+ E+A  + +ELL
Sbjct: 732 ELAREGRHEEANALADELL 750



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 21/297 (7%)

Query: 237 DEAYMLLNSASKR-GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           D A    + ASK+ G+  +  +Y  L     R  + +    +        I P+ FTY  
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL +SG  ++A ++L E+ +SG +PD   +N +IH  C      KAL +   M    
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---E 121

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            + +++T  I++ GLC+   L +A  +F     KG   +  TYN LI+  CK  ++  A+
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL EM+E  L P+  TY+ +        +++ A K    MVE G +             
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCM------------- 228

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               P+ ++Y+  ++  C  G   +A ++ +E R++G+  +K +Y  LM GL K  K
Sbjct: 229 ----PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 281


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/472 (32%), Positives = 265/472 (56%), Gaps = 18/472 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           PNR T+ +++  +CK G L++  ++ + M  N   PD   YN+LI+G+   G ++EA RL
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
            +EM S+ L P + TYN+L+N F +  +  EA +L   + E G +P+ VT++ +I   CK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 163 EGKIDKACKIV-RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
            GK+ +A +++   M E G S + V YN LI+  CK  N+E A+++++ M  KG   + I
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T NTIL  LC   K+ EA    +S   RGY  D V+Y  L+   +++ K + A+KL+ ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
             +  MP T TYN+++ GL++    ++A +M  +++ SG  P+  T++ ++ G C   +V
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           + A +   +M +    PD+VT NILL GLC+  +++KA + F + +  G A D V+Y+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           ++ LCK  ++ DA  L   M E+KL PD  T+  +   L ++G+L+EA+     M  +G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG- 424

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                             P  ++Y+  +N    QGR+  A ++ +  ++KG 
Sbjct: 425 ----------------CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 241/465 (51%), Gaps = 1/465 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+  T+  +L +  K+GKL +   L   M   G+ P+   YNIL+ GY K G + EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R+ + M      P ++TYN L+N +C    ++EA  L K M      PDVVTY+T+I+  
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 126 FESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            ++G+  EA + L  ++ E G   N V +N +I   CK+  I++A K++  M   G+ PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNT++   C+ G + EA +  D M  +G   + +  N +L  L  E K DEA  L  
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +GY  D V+Y +++ G  R    + A +++ +M      P+  TY+ ++ G  ++ 
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A  +L E+ + G +PD  T+N ++ G C    V+KA +  + MV+    PDIV+ +
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++L+GLC+   +  A   F   I +    D VT+N L+  LCK  +L++A  LL +M   
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
              PD   Y  +   L + GR  +A + T  M E G ++     P
Sbjct: 424 GCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCFKAP 468



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 229/426 (53%), Gaps = 1/426 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD + YN ++D   KKG+++E   L  +M   GL P+  TYN L++ +CK   +KEA
Sbjct: 38  GISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEA 97

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR-LRKEMESLKLLPDVVTYNTLIN 123
           M +   M +    PDV TY+ +I+G C  G + EA   L  +M       + V YN LIN
Sbjct: 98  MELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALIN 157

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +      A+KL++E+   G  P+ +T+N ++   C+ GK+ +A +   +M   G+SP
Sbjct: 158 GLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V YN L+DA  K G  +EA ++   +  KG   +T+T N+IL  L  +  +DEA  + 
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 277

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   +  +Y  +++G+ R +K + A K+ +EM +   +P   TYN ++ GL ++
Sbjct: 278 KKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKT 337

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A ++ + ++ +G  PD  +++ +++G C   +V  A    ++M+E+   PD+VT 
Sbjct: 338 NLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTF 397

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NIL+ GLC+ G L++A          G A D V YNTL++ L K+ R   A  L   M+E
Sbjct: 398 NILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457

Query: 424 KKLGPD 429
           K    D
Sbjct: 458 KGFLSD 463



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 201/375 (53%), Gaps = 1/375 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   TYN++L+A  K+ K+ E  +L   M ++G  P+  TY+ ++SG CK G 
Sbjct: 69  MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           + EA+ ++   M +     +   YN LING C    +E A++L +EM S   +PD +TYN
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+++     G+  EA +  D +   G  P+ V +N ++    KEGK D+A K+ +++   
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G+ PD VTYN+++    +  NM+EA  M   M   G   N  T + +L   C  KK+D+A
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + +L   SK G   D V+Y  L+ G  +    ++A +L+  M +    P   +Y+ ++ G
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 368

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++ K   A  + + +++  ++PD  TFN ++ G C  G++++A    ++M      PD
Sbjct: 369 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428

Query: 360 IVTCNILLSGLCREG 374
            V  N L++GL ++G
Sbjct: 429 YVAYNTLMNGLRKQG 443



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 177/349 (50%), Gaps = 18/349 (5%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SP+  T+  ++ + CK G + + +++ + M   G+  + I  N ++     + ++DEA  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L       G      +Y +L+  + ++ K   A++L+  M E+   P   TY+ +I GL 
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 302 QSGKTEQAIDML-NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++GK  +A++ML +++++ G   +   +N +I+G C +  +E+A +   +M  K + PD 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N +LSGLCR G + +A +FF S   +G + D V YN L+ +L KE + ++A  L  +
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +  K   PD  TY +I   L     ++EA++    MV +G                   P
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG-----------------CAP 287

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +YS  ++ HC   +  DA ++ EE  + G   +  TY  L++GL K
Sbjct: 288 NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 336



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 155/291 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PDN+TYNTIL  L + GK++E +     M  +G  P+   YN L+    K G 
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EAM++   +     +PD  TYN ++ G      ++EA  + K+M +    P+  TY+ 
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++    + +  +A K+++E+ + G  P+ VT+NI++   CK   +DKA ++   M +NG
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD V+Y+ +++  CK   + +A  + D M  + L  + +T N ++  LC   KLDEA 
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
            LL+  +  G   D V+Y TL+ G  +  +  +A +L   MKE+  +   F
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 157/316 (49%), Gaps = 20/316 (6%)

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N  T   +L + C + KL + Y L       G   D + Y  LI GY +  + + A +L+
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           +EM    + PS +TYN+++    +  K ++A+++   + + G  PD  T++TII G C  
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 339 GQVEKALQ--FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           G+V +AL+  FH KM+E+    + V  N L++GLC++  +E+A K       KG   D++
Sbjct: 127 GKVTEALEMLFH-KMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYNT++S LC+  ++ +A      M  +   PD   Y  +  AL + G+ +EA K    +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           +  G +                 P +++Y+  +     +    +A ++F++    G A N
Sbjct: 246 IAKGYM-----------------PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288

Query: 517 KSTYMNLMNGLIKRRK 532
            +TY  +++G  + +K
Sbjct: 289 GATYSIVLSGHCRAKK 304



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 18/251 (7%)

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R+  P+ +T+  ++    + GK      +  ++L +G+ PD   +N +I G+  +G+V++
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A + + +MV    +P I T N LL+  C+E  +++A++ F++   KG   D VTY+T+IS
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 404 SLCKERRLEDAFGLL-SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            LCK  ++ +A  +L  +M E+    +   Y A+   L +   +E A K    M   G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                            P +I+Y+  ++  C  G+  +A Q F+    +G + +   Y  
Sbjct: 182 -----------------PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224

Query: 523 LMNGLIKRRKS 533
           L++ L K  K+
Sbjct: 225 LLDALYKEGKT 235


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 284/529 (53%), Gaps = 17/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  TY+T+++A  K  + +  + +L +M+++G   N  TYN+L++G C+ G 
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA      M     +PD +TY  LING C +    EA  L  EM   +L P+VV Y  
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   G + EAFK+I E+   G++PN +T++ +++  CK G++D+A  +++ M  + 
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TYN +I+ + +  + ++AFR++  M   G+  N  T + ++H LC   + ++A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   + +G   +   Y  LI+GY R+   + A +++D+M +  ++P  + YN++I+GL
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+ E++     ++ + G++P+E T++ +IHG+   G +E A Q   +M++   KP+ 
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 594

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    LL    +   +EK    F+S + +G  +D+  Y  LI +L     +E AF +LS 
Sbjct: 595 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 654

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +E+    PD + Y+++ + L ++   E+A      M + G                 +DP
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG-----------------VDP 697

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + + Y+  I+  C  G    A  +F     KG+  N  TY +L++G  K
Sbjct: 698 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 746



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 258/520 (49%), Gaps = 18/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y  ++D   ++G  +E   ++ +M   G+ PN+ TY+ LV G CK+G +  A  +
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M ++   PD  TYN++I G       ++AFRL  EME+  + P+V TY+ +I+   +
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG   +A  L++E+   G+KPNA  +  +I  YC+EG +  AC+I   M +    PD   
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI    K G +EE+ +    M  +GL  N  T + ++H       L+ A  L+    
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   ++V Y  L+  YF+ +   +    +  M ++ +M     Y  +I  LS SG  E
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L+ + ++G +PD   ++++I G C     EKA    ++M +K   P+IV  N L+
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G +  A   F S + KG   + VTY +LI   CK   + +AF L +EM    + 
Sbjct: 707 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 766

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD + Y+ + T    +G LE+A      M   G   H  +                S++ 
Sbjct: 767 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG---HASIS---------------SFNN 808

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++  C +G+ ++ L++      +G+  N  T  N+++GL
Sbjct: 809 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 848



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 275/551 (49%), Gaps = 39/551 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TYN I++  F+     +   LLS+M+  G+ PN  TY+I++ G C+ G  ++A  +
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ MT     P+ + Y  LI+G+C  G +  A  +  +M  + +LPD+  YN+LI    +
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  E+ K   ++ E G+ PN  T++ +I  Y K G ++ A ++V+ M + G  P+ V 
Sbjct: 537 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 596

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+++  K+ ++E+       M  +G+ ++      ++H L     ++ A+ +L+   
Sbjct: 597 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   D   Y +LI+G  +     +A  + DEM ++ + P+   YNA+I GL +SG   
Sbjct: 657 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 716

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++ N +L  G++P+  T+ ++I G C  G +  A   +N+M+     PD    ++L 
Sbjct: 717 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 776

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +G    G LE+A+       L+G A  S ++N L+   CK  ++++   LL  +  + L 
Sbjct: 777 TGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLV 835

Query: 428 PDRYTYAAIHTALVESGRLEE----------------AQKFTSI---MVETGKINHQVVQ 468
           P+  T   I + L E+G+L E                A+ F+S+   M+  GKI   VV 
Sbjct: 836 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD 895

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                             + I +HC +G    AL + +    K   +  S+Y+ +++ L 
Sbjct: 896 ------------------DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLC 937

Query: 529 KRRKSISKAVD 539
           ++ K +S+A++
Sbjct: 938 RKGK-LSEALN 947



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 246/536 (45%), Gaps = 89/536 (16%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY+ ++  L + G+  +  DLL +M  +GL PN   Y  L+SGYC+ G 
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 504

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + D MT+   LPD++ YN LI G    G +EE+ +   +M+   LLP+  TY+ 
Sbjct: 505 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 564

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK------------ 168
           LI+ + ++G    A +L+  + + G+KPN V +  +++ Y K   I+K            
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624

Query: 169 -----------------------ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                                  A +++  +E+NG  PD   Y++LI   CK  + E+AF
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++D M +KG+  N +  N ++  LC    +  A  + NS   +G   + V+Y +LI G 
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +    + A  L++EM    I P  F Y+ +  G S +G  EQA+ ++ E+   G     
Sbjct: 745 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASI 803

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL--------------- 370
           ++FN ++ GFC  G++++ L+  + ++ +   P+ +T   ++SGL               
Sbjct: 804 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 863

Query: 371 --------------------------------------CREGILEKALKFFRSWILKGKA 392
                                                 C+EG L+KAL      + K   
Sbjct: 864 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 923

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +   +Y  ++ +LC++ +L +A  LL EM+++ + P       + T L  SG ++E
Sbjct: 924 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQE 979



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 159/400 (39%), Gaps = 87/400 (21%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P++V Y  +L++ FK   + +V      M  QG++ +   Y IL+      G ++ A
Sbjct: 589 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 648

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV+  + +N S+PDV  Y+ LI+G C     E+AF +  EM    + P++V YN LI+ 
Sbjct: 649 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 708

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SG    A  + + +   G+ PN VT+  +I   CK G I  A  +   M   G +PD
Sbjct: 709 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768

Query: 185 CVTY----------------------------------NTLIDANCKAGNMEEAFRMMDV 210
              Y                                  N L+D  CK G M+E  +++ V
Sbjct: 769 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHV 828

Query: 211 MGRKGLKMNTITLNTIL------------HTL---------------------------- 230
           +  +GL  N +T+  I+            HT+                            
Sbjct: 829 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 888

Query: 231 -------------CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
                        C E  LD+A ML +    +   +   SY  ++    R  K + AL L
Sbjct: 889 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 948

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
             EM +R I PS      ++  L  SG  ++   +L+ +L
Sbjct: 949 LKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 70/311 (22%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+ V YN ++D L K G ++  R++ + +  +GLVPN  TY  L+ G CK+G +  A
Sbjct: 694  GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              + + M      PD + Y++L  G  +AG LE+A  L +EM  L+    + ++N L++ 
Sbjct: 754  FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDG 812

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVT-----------------HNI------------ 155
            F + G+  E  KL+  +   G+ PNA+T                 H I            
Sbjct: 813  FCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 872

Query: 156  ------------------------MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
                                    MI+ +CKEG +DKA  +   +        C +Y  +
Sbjct: 873  ARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAI 932

Query: 192  IDANCKAGNMEEAFRMMDVMGRKGL----KMNTITL------------NTILHTLCCEKK 235
            +D  C+ G + EA  ++  M ++G+        I L            NT+L  + C K 
Sbjct: 933  VDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKW 992

Query: 236  LDEAYMLLNSA 246
            L +     NSA
Sbjct: 993  LQKDSKFCNSA 1003



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 60/212 (28%)

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
              + ++  +   G+V+ A +    M ++   P I  CN LL  L R             
Sbjct: 175 AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRA------------ 222

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG----PDRYTYAAIHTALV 441
                                      DA  LL ++ E  +G    PD YTY+ +  A  
Sbjct: 223 ---------------------------DAMALLWKVREFMVGAGISPDVYTYSTLIEAYC 255

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           +    + A+K    M E G                    ++++Y+  I   C  G  ++A
Sbjct: 256 KVREFDTAKKVLVEMRERG-----------------CGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
               ++    G+  +  TY  L+NGL K R+S
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 330


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 263/511 (51%), Gaps = 17/511 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P  +TY  ++DAL K  ++++   +L DM + G  PN  TYN L++G+CKLG + EA+
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M +N   PDV+TYN+LI+G+C     ++  +L +EM      P+ +TYNTL++  
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +SG+ ++AF L   +     KP+  T N+MI  +CK G++D A ++ + M + G  PD 
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TYN +I   C+A  +++A ++++ M   G   + +T N+I+  LC   ++DEAY +   
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 471

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               GY+LD V+  TLI G  +  + + A KL  EM+     P    Y  +I G  ++ +
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++++   +E+L  G +P   T++ +I   C   +V         M+E+   PD +    
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ GLC+    ++A + ++     G A   VTYN L+  LCK  RL++A  LL  ME   
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDG 651

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD  TY ++     +S   ++A +    M   G                   P+   Y
Sbjct: 652 CLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG-----------------CSPTPFMY 694

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           S  + +  ++ +   A++I+EE  + G  ++
Sbjct: 695 SLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 267/524 (50%), Gaps = 18/524 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD++TY+T+++   K     +   LL +M+K+G+VP+   YN ++ G C  G +  A+
Sbjct: 163 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                M +N + P V TY +L++  C +  + +A  + ++M      P+VVTYNTLIN F
Sbjct: 223 VHYRDMQRNCA-PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 281

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G   EA  L +++ E+   P+  T+NI+I  YCK+ +     K+++ M + G  P+ 
Sbjct: 282 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 341

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TYNTL+D+  K+G   +AF +  +M R+  K +  T N ++   C   +LD AY L   
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            + RG   D  +Y  +I+G  R  + + A +L + M E    P   TYN+++ GL ++ +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A ++   L   G   D  T +T+I G C   +++ A +   +M      PD+V   I
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C+   L+K+L FF   + KG     +TY+ +I  LCK  R+ D   LL  M E+ 
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + PD   Y ++   L +S   +EA +   +M +TG                   P+ ++Y
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG-----------------CAPTVVTY 624

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +++ C   R  +A+ + E     G   +  TY ++ +G  K
Sbjct: 625 NVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWK 668



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 258/518 (49%), Gaps = 18/518 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +L A  +K K  E  DL  + +     P+  TY+ L++G+CK    ++A R++D M
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   +P    YN +I G C+ G ++ A    ++M+     P V+TY  L++   +S R 
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARI 252

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A  +++++ E G  PN VT+N +I  +CK G +D+A  +   M EN  SPD  TYN L
Sbjct: 253 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 312

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CK    ++  +++  M + G + N IT NT++ +L    K  +A+ L     +R  
Sbjct: 313 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
                ++  +I  + +  + + A +L+  M +R  +P  +TYN MI G  ++ + + A  
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L  + ++G  PD  T+N+I+ G C   QV++A + +  +    +  D+VTC+ L+ GLC
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 492

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +   L+ A K  R     G A D V Y  LI   CK  +L+ +    SEM +K   P   
Sbjct: 493 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 552

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY+ +   L +S R+ +       M+E G                 + P +I Y+  I+ 
Sbjct: 553 TYSIVIDKLCKSARVRDGCMLLKTMLERG-----------------VTPDAIVYTSVIDG 595

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            C    Y +A ++++  +Q G A    TY  L++ L K
Sbjct: 596 LCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 247/473 (52%), Gaps = 4/473 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYNT+++   K G ++E   L + M +    P+  TYNIL+ GYCK    ++ 
Sbjct: 266 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 325

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +    P+  TYN L++    +G   +AF L + M      P   T+N +I+ 
Sbjct: 326 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 385

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+   A++L   + + G  P+  T+NIMI   C+  +ID A +++  M E G  PD
Sbjct: 386 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 445

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+++   CKA  ++EA+ + +V+   G  ++ +T +T++  LC  ++LD+A  LL 
Sbjct: 446 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 505

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D V+Y  LI G+ + ++ +++L  + EM ++  +P+  TY+ +I  L +S 
Sbjct: 506 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +      +L  +L+ G+ PD   + ++I G C     ++A + +  M +    P +VT N
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYN 625

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+  LC+   L++A+         G   D+VTYN++     K    + AF L   M+ +
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
              P  + Y+ + T LV   ++++A +     +E G      V P  S+T ++
Sbjct: 686 GCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGAD----VDPEISRTLQQ 734



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 233/484 (48%), Gaps = 53/484 (10%)

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           +T N L++ +      +EA+ L K        PD +TY+TLIN F ++    +A++L+DE
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           +++ GI P+   +N +IK  C  G++D A    R+M+ N  +P  +TY  L+DA CK+  
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNC-APSVITYTILVDALCKSAR 251

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + +A  +++ M   G   N +T NT+++  C    +DEA +L N   +     D  +Y  
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311

Query: 261 LITGYFRDEKANRALKLWDEMKE-----------------------------------RQ 285
           LI GY + E+     KL  EM +                                   R 
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             PS FT+N MI    + G+ + A ++   +   G +PD  T+N +I G C   +++ A 
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           Q   +M E    PD+VT N ++SGLC+   +++A + +      G  +D VT +TLI  L
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK RRL+DA  LL EME     PD   Y  +     ++ +L+++  F S M++ G +   
Sbjct: 492 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV--- 548

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                         P+ I+YS  I++ C   R +D   + +   ++G+  +   Y ++++
Sbjct: 549 --------------PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVID 594

Query: 526 GLIK 529
           GL K
Sbjct: 595 GLCK 598



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 216/401 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC P+ +TYNT++D+L K GK  +  +L   M ++   P+  T+N+++  +CK+G 
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 391

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  +  LMT    LPD++TYN++I+G C A  +++A +L + M      PDVVTYN+
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   ++ +  EA+++ + L   G   + VT + +I   CK  ++D A K++R ME NG
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD V Y  LI   CKA  ++++      M  KG     IT + ++  LC   ++ +  
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL +  +RG   D + Y ++I G  + +  + A +L+  MK+    P+  TYN ++  L
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + ++AI +L  +   G +PD  T+N++  GF    + +KA +    M  +   P  
Sbjct: 632 CKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTP 691

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
              ++LL+ L  E  +++A++ +   +  G  VD     TL
Sbjct: 692 FMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 184/387 (47%), Gaps = 53/387 (13%)

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           + G K +  T N ++  + ++ K  +A  + +N      SPD +TY+TLI+  CKA + +
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A+R++D M ++G+  +    NTI+  LC   ++D A +                     
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV--------------------- 223

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
             ++RD + N A             PS  TY  ++  L +S +   A  +L +++++G  
Sbjct: 224 --HYRDMQRNCA-------------PSVITYTILVDALCKSARISDASLILEDMIEAGCA 268

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T+NT+I+GFC  G +++A+   N+M+E S  PD+ T NIL+ G C++   +   K 
Sbjct: 269 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 328

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            +  +  G   + +TYNTL+ SL K  +  DAF L   M  +   P  +T+  +     +
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G+L+ A +   +M + G +                 P   +Y+  I+  C   R  DA 
Sbjct: 389 VGQLDLAYELFQLMTDRGCL-----------------PDIYTYNIMISGACRANRIDDAR 431

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
           Q+ E   + G   +  TY ++++GL K
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCK 458



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S FT N ++    +  K ++A D+          PD  T++T+I+GFC     ++A +  
Sbjct: 131 SKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLL 190

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M ++   P     N ++ GLC  G ++ AL  +R  + +  A   +TY  L+ +LCK 
Sbjct: 191 DEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRNCAPSVITYTILVDALCKS 249

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            R+ DA  +L +M E    P+  TY  +     + G ++EA    + M+E          
Sbjct: 250 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS-------- 301

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P   +Y+  I+ +C Q R +D  ++ +E  + G   N  TY  LM+ L+
Sbjct: 302 ---------CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352

Query: 529 KRRKSI 534
           K  K I
Sbjct: 353 KSGKYI 358


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 167/554 (30%), Positives = 285/554 (51%), Gaps = 25/554 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD    + ++D   ++G ++EV  +   M   G+  N  TYN+L+ G CK G 
Sbjct: 235 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 294

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  ++  M      P+  T+ +LI G+C    +  A  L  EME   L+P  V+Y  
Sbjct: 295 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 354

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN          A KL++++   G+KPN V ++ +I  Y  EG+I++A +++  M  +G
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFR-MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            +PD   YN +I    KAG MEEA   ++++ GR GLK + +T    +       K+ EA
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR-GLKPDAVTFGAFILGYSKTGKMTEA 473

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               +     G   +   Y  LI G+F+      AL ++  +    ++P   T +A I G
Sbjct: 474 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+ ++A+ + +EL + G++PD  T++++I GFC +G+VEKA + H++M  K   P+
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   N L+ GLC+ G +++A K F     KG   DSVTY+T+I   CK   + +AF L  
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG------------------K 461
           EM  K + P  + Y A+     + G +E+A      M++ G                  K
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK 713

Query: 462 INH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           I    Q+ Q   +K   +I P  ++Y+  I+ HC  G+ ++A  +F+E +++ + ++  T
Sbjct: 714 IQEASQLFQEMIAK---QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 770

Query: 520 YMNLMNGLIKRRKS 533
           Y +LM G  K  +S
Sbjct: 771 YTSLMYGYNKLGQS 784



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 289/555 (52%), Gaps = 20/555 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P++ T+  +++   ++  +    +LL +M+K+ LVP+  +Y  +++G C    
Sbjct: 305 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 364

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A ++++ MT +   P+V  Y+ LI G+ + G +EEA RL   M    + PD+  YN 
Sbjct: 365 LSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 424

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++G+  EA   + E+   G+KP+AVT    I  Y K GK+ +A K    M ++G
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+   Y  LI+ + KAGN+ EA  +   +   G+  +  T +  +H L    ++ EA 
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   ++G   D  +Y +LI+G+ +  +  +A +L DEM  + I P+ F YNA++ GL
Sbjct: 545 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG  ++A  + + + + G+ PD  T++T+I G+C    V +A    ++M  K  +P  
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 664

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N L+ G C+EG +EKA+  FR  + KG A  ++++NTLI   CK  ++++A  L  E
Sbjct: 665 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQE 723

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQ----------------KFTSIMVETGKINH 464
           M  K++ PD  TY  +     ++G++EEA                  +TS+M    K+  
Sbjct: 724 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 783

Query: 465 --QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
             +V         + + P  ++Y   I  HC +    +A ++ +E   KG+ + K T  +
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM-LTKGTIHD 842

Query: 523 LMNGLIKRRKSISKA 537
           L+   + +R+ +++A
Sbjct: 843 LLITALCKREDLTEA 857



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 150/451 (33%), Positives = 242/451 (53%), Gaps = 1/451 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++G G  PD VT+   +    K GK+ E      +M   GL+PN   Y +L++G+ K G 
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 504

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +   +     LPDV T +  I+G    G ++EA ++  E++   L+PDV TY++
Sbjct: 505 LMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 564

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   +AF+L DE+   GI PN   +N ++   CK G I +A K+   M E G
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY+T+ID  CK+ N+ EAF +   M  KG++ ++   N ++H  C E  +++A 
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++G+    +S+ TLI GY +  K   A +L+ EM  +QIMP   TY  +I   
Sbjct: 685 NLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 743

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK E+A  +  E+ +  +I D  T+ ++++G+   GQ  +      KMV K  KPD 
Sbjct: 744 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 803

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +++   C+E  L +A K     + KG       ++ LI++LCK   L +A  LL E
Sbjct: 804 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 863

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           M E  L P     + +  +  E+G+++EA +
Sbjct: 864 MGELGLKPSLAACSTLVRSFHEAGKMDEATR 894



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 266/526 (50%), Gaps = 26/526 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   YN I+  L K GK+ E    L +++ +GL P+  T+   + GY K G + EA
Sbjct: 414 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 473

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +  D M  +  +P+   Y +LING   AG L EA  + + + +L +LPDV T +  I+ 
Sbjct: 474 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR  EA K+  EL E G+ P+  T++ +I  +CK+G+++KA ++   M   G +P+
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN L+D  CK+G+++ A ++ D M  KGL+ +++T +T++   C  + + EA+ L +
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G       Y  L+ G  ++    +A+ L+ EM ++    +T ++N +I G  +S 
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 712

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A  +  E++   ++PD  T+ T+I   C  G++E+A     +M E++   D VT  
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  + G   +    F   + KG   D VTY  +I + CKE  L +AF L  E+   
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV--- 829

Query: 425 KLGPDRYTYAAIH----TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
            +G    T   IH    TAL +   L EA K    M E G                 + P
Sbjct: 830 -VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG-----------------LKP 871

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           S  + S  +      G+  +A ++FE  +  G+  + +T ++L+NG
Sbjct: 872 SLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 224/421 (53%), Gaps = 1/421 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +   G LPD  T +  +  L K G++ E   + S++K++GLVP+  TY+ L+SG+CK G 
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  + D M      P+++ YN L++G C +G ++ A +L   M    L PD VTY+T
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + +S    EAF L  E+   G++P++  +N ++   CKEG ++KA  + R M + G
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+   +++NTLID  CK+  ++EA ++   M  K +  + +T  T++   C   K++EA 
Sbjct: 695 FATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 753

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +L     +R   +D V+Y +L+ GY +  +++    L+++M  + + P   TY  +I+  
Sbjct: 754 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 813

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +     +A  + +E++  GM+   T  + +I   C    + +A +  ++M E   KP +
Sbjct: 814 CKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSL 873

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             C+ L+      G +++A + F      G   D+ T   L++    +   EDA  L+ +
Sbjct: 874 AACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQ 933

Query: 421 M 421
           +
Sbjct: 934 L 934



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 175/348 (50%), Gaps = 1/348 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+   YN ++D L K G +   R L   M ++GL P+  TY+ ++ GYCK   + EA
Sbjct: 589 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 648

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M      P  + YN L++G C  G +E+A  L +EM   K     +++NTLI+ 
Sbjct: 649 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-KGFATTLSFNTLIDG 707

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +S +  EA +L  E+    I P+ VT+  +I W+CK GK+++A  + + M+E     D
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 767

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY +L+    K G   E F + + M  KG+K + +T   +++  C E  L EA+ L +
Sbjct: 768 TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 827

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G       +  LIT   + E    A KL DEM E  + PS    + ++    ++G
Sbjct: 828 EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAG 887

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           K ++A  +   +   G++PD TT   +++G  ++   E A     ++V
Sbjct: 888 KMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/467 (33%), Positives = 263/467 (56%), Gaps = 5/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+ + Y T++ AL K G++NEV  LL +M   G +P+  T+N  + G CK+  
Sbjct: 243 MTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLR 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++VD M      P+ +TY +L++G C  G ++EA  L  ++ +    P+VV +NT
Sbjct: 303 IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNT 358

Query: 121 LINRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LIN +   GR  EA  ++ E +   G  P+  T+N +I   CK+G +  A +++  M+  
Sbjct: 359 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 418

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P+ +TY  LID  CK G +EEA  ++D M  KGL +N +  N ++  LC ++K+ +A
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +    S +G   D  ++ +LI G  +  K   AL L+ +M    ++ +T TYN +I  
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 538

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + G  ++A+ ++N++L  G   D+ T+N +I   C  G +EK L     M+ K   P+
Sbjct: 539 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            ++CNIL++GLCR G ++ AL+F R  I +G   D VTYN+LI+ LCK  R ++A  L  
Sbjct: 599 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 658

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +++ + + PD  TY  + +   + G  ++A    S  V++G I ++V
Sbjct: 659 KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEV 705



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/444 (33%), Positives = 242/444 (54%), Gaps = 5/444 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+PD  T+N  +  L K  +++E   L+  M  +G  PN  TY +L+ G C++G + EA
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE-MESLKLLPDVVTYNTLIN 123
             +++ +      P+V  +N LING+ + G L+EA  +  E M S+   PD+ TYNTLI 
Sbjct: 342 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G  + A +L++E+   G +PN +T+ I+I  +CKEG++++A  ++  M   G + 
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V YN LI A CK   +++A  M   M  KG K +  T N+++  LC   K +EA  L 
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   + ++Y TLI  + R      ALKL ++M  R       TYN +I  L ++
Sbjct: 518 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 577

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+ + +  +++  G+ P+  + N +I+G C  G ++ AL+F   M+ +   PDIVT 
Sbjct: 578 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 637

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L++GLC+ G  ++AL  F    ++G   D++TYNTLIS  CKE   +DA  LLS   +
Sbjct: 638 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 697

Query: 424 KKLGPDRYTYAAIHTALVESGRLE 447
               P+  T+  + +  ++ G  E
Sbjct: 698 SGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/527 (30%), Positives = 267/527 (50%), Gaps = 24/527 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+  ++ AL    +++    LL DM + G VPN   Y  L+    K+G + E 
Sbjct: 212 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEV 271

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M     +PDV T+N  I+G C    + EA +L   M      P+  TY  L++ 
Sbjct: 272 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 331

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-NMEENGFSP 183
               G+  EA  L++++      PN V  N +I  Y   G++D+A  ++  +M   G  P
Sbjct: 332 LCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYNTLI   CK G +  A  +M+ M  KG + N IT   ++   C E +L+EA  +L
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  S +G  L+ V Y  LI+   +DEK   AL ++ +M  +   P  FT+N++I+GL + 
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K E+A+ +  ++L  G+I +  T+NT+IH F   G +++AL+  N M+ +    D +T 
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+  LCR G +EK L  F   + KG   ++++ N LI+ LC+   ++ A   L +M  
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           + L PD  TY ++   L ++GR +EA   F  + VE                   I P +
Sbjct: 628 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG------------------ICPDA 669

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+Y+  I+ HC +G + DA  +       G   N+ T+  L++  IK
Sbjct: 670 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 182/342 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TYNT++  L KKG L   R+L+++M+ +G  PN  TY IL+  +CK G 
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  V+D M+      +   YN LI+  C    +++A  +  +M S    PD+ T+N+
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  +  EA  L  ++   G+  N +T+N +I  + + G + +A K+V +M   G
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D +TYN LI A C+AGN+E+   + + M  KGL  N I+ N +++ LC    +  A 
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG   D V+Y +LI G  +  +A  AL L+D+++   I P   TYN +I   
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 679

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            + G  + A  +L+  + SG IP+E T+  ++  F  EG  E
Sbjct: 680 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 188/422 (44%), Gaps = 31/422 (7%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            Y  LI++   +G       L+ ++ + GI        +++K Y + G   +A +++ +M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 177 E-----ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                 E  F    V  + L+  NC        + M+     KG+     T   ++  LC
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS----KGISPTVYTFGVVMKALC 228

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              ++D A  LL   ++ G   + + Y TLI    +  + N  LKL +EM     +P   
Sbjct: 229 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVN 288

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T+N  I GL +  +  +A  +++ +L  G  P+  T+  ++HG C  G+V++A    NK+
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 348

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERR 410
                 P++V  N L++G    G L++A       +L  G   D  TYNTLI  LCK+  
Sbjct: 349 P----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L  A  L++EM+ K   P+  TY  +     + GRLEEA+     M   G          
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG---------- 454

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  +  +++ Y+  I+  C   + +DAL +F +   KG   +  T+ +L+ GL K 
Sbjct: 455 -------LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507

Query: 531 RK 532
            K
Sbjct: 508 NK 509


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 276/528 (52%), Gaps = 17/528 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG      + N +++ L +   ++    +   M K G+ P+  T+  L++G C  G 
Sbjct: 119 MDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK 178

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K A+ + + M ++   PDV +YN LING CN+G    A  + K+ME     P+VVTYNT
Sbjct: 179 IKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNT 238

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A   + E+   GI P+A+T+N ++   C  G++++A ++ + ME+NG
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN +ID+  K   + +A   +  M  +G+  + +T  TILH LC   +L+EA 
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++G   D V+Y T+I    +D   N A++   EM +R I P+  TY+ ++ G 
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGF 418

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ ++A  +  E++   ++P+  TF+ ++ G C EG V +A      M EK  +P+I
Sbjct: 419 CNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N L++G C    + +A K F   + KG A D  +YN LI+  C  RR++ A  LL++
Sbjct: 479 YTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQ 538

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  KKL P+  TY  I   L   GRL +AQ+    M  +G +                 P
Sbjct: 539 MSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGML-----------------P 581

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           + ++YS  +N  C  G   +AL++F+  ++K +  +   Y  L+ G+ 
Sbjct: 582 TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMF 629



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 250/500 (50%), Gaps = 17/500 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD ++YNT+++ L   G  N    +   M++ G  PN  TYN ++   CK   + +AM  
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      PD  TYN +++G C  G L EA RL K ME     PDVVTYN +I+  ++
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYK 315

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                +A   + E+ + GI P+ VT+  ++   C  G++++A ++ + ME+ G  PD V 
Sbjct: 316 DRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA 375

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT+ID+ CK   + +A   +  M  +G+  N +T +TILH  C   +LDEA  L     
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            R    + +++  L+ G  ++   + A  +++ M E+ + P+ +TYNA++ G     K  
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN 495

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +   ++  G  PD  ++N +I+G+C+  +++KA     +M  K   P+ VT N ++
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIM 555

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC  G L  A + F+     G     +TY+ L++ LCK   L++A  L   M+EKKL 
Sbjct: 556 KGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE 615

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD   Y  +   +   G+LE A+   S +   G                 I P   +Y+ 
Sbjct: 616 PDIILYTILIEGMFIGGKLEVAKGLFSKLSADG-----------------IQPPGRTYNV 658

Query: 488 KINEHCSQGRYKDALQIFEE 507
            I     +G   +A ++F +
Sbjct: 659 MIKGLLKEGLSDEAYELFRK 678



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 148/449 (32%), Positives = 244/449 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTYNTI+D+L K   +N+  D LS+M  +G+ P+  TYN +V G C LG 
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA R+   M QN   PDV TYN++I+      ++ +A     EM    + PDVVTY T
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++     G+  EA +L  ++++ G KP+ V +N +I   CK+  ++ A + +  M + G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY+T++   C  G ++EA ++   M  + +  NT+T + ++  LC E  + EA 
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  + +++G   +  +Y  L+ GY    K N A K+++ M  +   P   +YN +I G 
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             S + ++A  +L ++    + P+  T+NTI+ G C  G++  A +   KM      P +
Sbjct: 524 CNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTL 583

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T +ILL+GLC+ G L++ALK F+S   K    D + Y  LI  +    +LE A GL S+
Sbjct: 584 MTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSK 643

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           +    + P   TY  +   L++ G  +EA
Sbjct: 644 LSADGIQPPGRTYNVMIKGLLKEGLSDEA 672



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 217/461 (47%), Gaps = 19/461 (4%)

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T+N SLP         +   N   +++A      M  +   P +V +   +    +  + 
Sbjct: 52  TKNPSLPK--KNGGFASNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQY 109

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
                L +++D  G+     + NI+I   C+   +D A  +   M + G  PD +T+ TL
Sbjct: 110 STVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTL 169

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  C  G ++ A  + + M R G + + I+ NT+++ LC     + A  +     + G 
Sbjct: 170 INGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGC 229

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + V+Y T+I    +D   N A+    EM  R I P   TYN+++ GL   G+  +A  
Sbjct: 230 KPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATR 289

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +   + Q+G  PD  T+N II     +  V  A  F ++MV++   PD+VT   +L GLC
Sbjct: 290 LFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLC 349

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G L +A++ F+    KG   D V YNT+I SLCK+R + DA   LSEM ++ + P+  
Sbjct: 350 YLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAV 409

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY+ I       G+L+EA +    MV                    + P+++++S  ++ 
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFKEMVG-----------------RNVMPNTLTFSILVDG 452

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C +G   +A  +FE   +KG+  N  TY  LMNG   R K
Sbjct: 453 LCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 280/529 (52%), Gaps = 19/529 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E FG  P  V++N ++    K G ++  +     M K GL+P+  +YNIL+ G C  G +
Sbjct: 264 EEFG--PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM 321

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +EA+   + M  +   PD+ TYN+L NG+   G++  A+++ + M    L PD+VTY  L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I    + G   E+FKL +++   G+K + VT+ +++   CK G+ID+A  ++  ME  G 
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD +TY+ LI   CK G +EEA  + + M  K +  N+   + I+  L  +  + EA M
Sbjct: 442 KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
             +S +K     + + Y  +I GY +      A++ + ++ E+ I P+  T+N++I+G  
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + GK  +A+ +L+ +   G++P   T+ T+++G+C EG +       ++M  K+ KP  +
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T  +++ GLC+EG L ++++  +    +G   D +TYNT+I S CK   L+ AF L ++M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +  L P   TY  +   L   G L++A +    + +                 + I  +
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQD-----------------QSIRLT 724

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            ++Y+  I  HC++G  ++AL  F +  ++G  ++   Y  ++N L KR
Sbjct: 725 KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKR 773



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 276/533 (51%), Gaps = 21/533 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN++L   +     + + D+ +++K  G+  N  T  IL+ G C+   L++A+  +   
Sbjct: 205 TYNSLL---YNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRET 261

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
              +  P V ++N L++G+C  G ++ A      M    LLPDV +YN L++    +G  
Sbjct: 262 GGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM 321

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +  ++++ HG++P+ VT+NI+   +   G I  A K+V+ M  NG +PD VTY  L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I  +C+ GN+EE+F++ + M  +GLK++ +T   +L +LC   ++DEA +LL+     G 
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y  LI G  +      A++L++EM  ++I P++F  +A+I GL + G   +A  
Sbjct: 442 KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
             + + +S +  +   +N +I G+   G + +A++ + +++EK   P IVT N L+ G C
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++G L +A+K   +  + G    SVTY TL++  C+E  +   F +L EME K + P + 
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV------------------QPNTSK 473
           TY  +   L + GRL E+ +    M   G    Q+                   Q +   
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
               + PS ++Y+  IN  C  G  KDA ++    + + I + K  Y  ++  
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 734



 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 252/495 (50%), Gaps = 35/495 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G LPD  +YN +L  L   G + E  +  +DM+  G+ P+  TYNIL +G+  LG 
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A +VV  M  N   PD+ TY +LI G C  G +EE+F+L+++M S  L   +VTY  
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   +SGR  EA  L+ E++  G+KP+ +T++++I   CK G +++A ++   M    
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 181 FSP-------------------------DCVT----------YNTLIDANCKAGNMEEAF 205
             P                         D VT          YN +ID   K GN+ EA 
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R    +  KG+    +T N++++  C + KL EA  LL++    G     V+Y TL+ GY
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             +   +    +  EM+ + I P+  TY  ++ GL + G+  +++ +L  +   G+ PD+
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+NT+I  FC    ++KA Q HN+M++ S +P  VT N+L++GLC  G L+ A +   +
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +   +  V Y T+I + C +  +++A     +M E+        Y+A+   L +   
Sbjct: 716 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNL 775

Query: 446 LEEAQKFTSIMVETG 460
           + +A+ F  +M+  G
Sbjct: 776 ITDAKFFFCMMLTHG 790



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 225/456 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY  ++    + G + E   L   M  QGL  +  TY +L+S  CK G + EA
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M      PD+ TY++LI+G C  G +EEA  L +EM S ++ P+    + +I+ 
Sbjct: 430 VILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISG 489

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            FE G   EA    D + +  +    + +NIMI  Y K G I +A +  + + E G SP 
Sbjct: 490 LFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 549

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N+LI   CK G + EA +++D +   GL   ++T  T+++  C E  +   + +L+
Sbjct: 550 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLH 609

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +     +++Y  ++ G  ++ + + +++L   M  R + P   TYN +I    ++ 
Sbjct: 610 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 669

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  + N++LQ  + P   T+N +I+G C  G ++ A +    + ++S +   V   
Sbjct: 670 DLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYT 729

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++   C +G ++ AL FF   + +G  V    Y+ +I+ LCK   + DA      M   
Sbjct: 730 TIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTH 789

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            + PD+     +  A   SG      +  ++M++ G
Sbjct: 790 GIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCG 825



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 203/428 (47%), Gaps = 35/428 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TY+ ++  L K+G + E  +L  +M  + + PN    + ++SG  + G 
Sbjct: 436 MEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 495

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA    D +T++    ++  YN++I+G+   G + EA R  K++    + P +VT+N+
Sbjct: 496 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 555

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + G+  EA KL+D +  HG+ P +VT+  ++  YC+EG +     ++  ME   
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  +TY  ++   CK G + E+ +++  M  +GL  + IT NT++ + C    L +A+
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N                                   +M +  + PS  TYN +I GL
Sbjct: 676 QLHN-----------------------------------QMLQHSLQPSPVTYNVLINGL 700

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  + A  +L  L    +   +  + TII   C++G V+ AL F ++MVE+ F+  I
Sbjct: 701 CVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSI 760

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              + +++ LC+  ++  A  FF   +  G   D      ++++  +       F + + 
Sbjct: 761 RDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAM 820

Query: 421 MEEKKLGP 428
           M +  L P
Sbjct: 821 MIKCGLLP 828



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 245/552 (44%), Gaps = 69/552 (12%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK---SLPDV------- 80
           DLL +  + G   +R ++ I+     + G  KE  RV++ M + +   S P +       
Sbjct: 103 DLLRN--EYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160

Query: 81  ---W-----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI---------- 122
              W      ++ML   +  A M+ +A  +  +M+ L L   + TYN+L+          
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMW 220

Query: 123 ---NRFFESG-------------------RSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
              N    SG                   R  +A   + E       P+ V+ N ++  +
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK G +D A      M + G  PD  +YN L+   C AG+MEEA    + M   G++ + 
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +T N + +       +  A+ ++      G   D V+Y  LI G+ +      + KL ++
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  + +  S  TY  ++  L +SG+ ++A+ +L+E+   G+ PD  T++ +IHG C  G 
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           VE+A++ + +M  K   P+   C+ ++SGL  +G + +A  +F S      A + + YN 
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +I    K   + +A     ++ EK + P   T+ ++     + G+L EA K    +++T 
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK----LLDTI 576

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           K++  V             P+S++Y+  +N +C +G       +  E   K I   + TY
Sbjct: 577 KVHGLV-------------PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITY 623

Query: 521 MNLMNGLIKRRK 532
             ++ GL K  +
Sbjct: 624 TVVVKGLCKEGR 635



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 199/426 (46%), Gaps = 40/426 (9%)

Query: 131 SMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---EENGFSPDC- 185
           S  A  L D L +E+G + + V+  I+     ++G+  +  +++  M   E +G +P   
Sbjct: 95  SDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLC 154

Query: 186 --------------VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                         V ++ L  A  +A  + +A  ++  M    L+++  T N++L+ L 
Sbjct: 155 ELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL- 213

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
             +  D  + + N     G   +E +   LI G  R  +   A+    E    +  PS  
Sbjct: 214 --RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVV 271

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           ++NA++ G  + G  + A      +++ G++PD  ++N ++HG C  G +E+AL+F N M
Sbjct: 272 SFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDM 331

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                +PDIVT NIL +G    G++  A K  +  +L G   D VTY  LI   C+   +
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNI 391

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           E++F L  +M  + L     TY  + ++L +SGR++EA      M   G           
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG----------- 440

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 + P  ++YS  I+  C +G  ++A++++EE   K I  N      +++GL + +
Sbjct: 441 ------LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE-K 493

Query: 532 KSISKA 537
            +IS+A
Sbjct: 494 GAISEA 499


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/512 (31%), Positives = 269/512 (52%), Gaps = 26/512 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYNTI++ L K   L    +L  ++ ++G  P+  TYN L+   CK G L+EA
Sbjct: 32  GVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 91

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
            R+   M+    +P+V TY++LING C  G ++EA  L +EM  +S  +LP+++TYN+ +
Sbjct: 92  RRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 151

Query: 123 NRFFESGRSMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +   +   + EA +L+  L +  ++  P+ VT + +I   CK G+ID+AC +  +M   G
Sbjct: 152 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 211

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ +TYN L++  CKA  ME A  M++ M  KG+  + IT + ++   C   ++DEA 
Sbjct: 212 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 271

Query: 241 MLLNSASKRG-----YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
            LL+  + RG        D+V++  LI G  +     +A  L++EM  + + P   T+ A
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 331

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL ++G+ E A D+L+ +   G+ P+  T+N ++HG C  G++E+A QF  +MV   
Sbjct: 332 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 391

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PD +T   L+  LCR    + AL+        G   D+VTYN L+  L K  + E A 
Sbjct: 392 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAI 451

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            +L EM  K   PD +T+AA  + L  SG L    +   +++  G +             
Sbjct: 452 TVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGML------------- 498

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
               P + + S  ++  C  G+  D   + +E
Sbjct: 499 ----PDATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 164/530 (30%), Positives = 270/530 (50%), Gaps = 27/530 (5%)

Query: 13  YNTILDALFKKGKLNEVRDLL-SDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           YN +L +L + G      ++   +M + G+ P   TYN +++G CK   L   M + + +
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    PDV TYN LI+  C AG LEEA RL  +M S   +P+VVTY+ LIN   + GR 
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 132 MEAFKLIDELDEHG--IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--SPDCVT 187
            EA +LI E+      + PN +T+N  +   CK+    +AC+++R++ +     SPD VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++TLID  CK G ++EA  + D M   G   N IT N +++ LC   K++ A+ ++ S  
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----IMPSTFTYNAMIWGLSQ 302
            +G   D ++Y  L+  + +  + + AL+L   M  R      ++P   T+N +I G  +
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G  EQA  +  E++   + PD  TF  +I G C  GQVE A    + M      P++VT
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ GLC+ G +E+A +F    +  G   DS+TY +L+ +LC+  R +DA  L+SE++
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
                PD  TY  +   L +SG+ E+A      MV  G   HQ              P S
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG---HQ--------------PDS 466

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +++   +     G     +++      KG+  + +T  ++++ + +  K
Sbjct: 467 FTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGK 516



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 236/459 (51%), Gaps = 44/459 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYNT++D+L K G L E R L  DM  +G VPN  TY++L++G CK+G + EA  +
Sbjct: 70  PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 129

Query: 68  VDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEME--SLKLLPDVVTYNTLIN 123
           +  MT+     LP++ TYN  ++G C   M  EA  L + +   SL++ PD VT++TLI+
Sbjct: 130 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 189

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G+  EA  + D++   G  PN +T+N ++   CK  K+++A  ++ +M + G +P
Sbjct: 190 GLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTP 249

Query: 184 DCVTYNTLIDA----------------------------------------NCKAGNMEE 203
           D +TY+ L+DA                                         CKAGN E+
Sbjct: 250 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQ 309

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A  + + M  K L+ + +T   ++  LC   +++ A  +L+     G   + V+Y  L+ 
Sbjct: 310 ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVH 369

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           G  +  +   A +  +EM     +P + TY ++++ L ++ +T+ A+ +++EL   G  P
Sbjct: 370 GLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDP 429

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D  T+N ++ G    G+ E+A+    +MV K  +PD  T     SGL R G L   ++  
Sbjct: 430 DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELL 489

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           R  + KG   D+ T ++++  +C+  +L+D   ++ E E
Sbjct: 490 RVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 148/464 (31%), Positives = 236/464 (50%), Gaps = 27/464 (5%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           V  YN+++   C AG    A  + R EM    + P +VTYNT+IN   +S       +L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           +EL E G  P+ VT+N +I   CK G +++A ++  +M   G  P+ VTY+ LI+  CK 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 199 GNMEEAFRMMDVMGRKGLKM--NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL--D 254
           G ++EA  ++  M RK   +  N IT N+ L  LC +    EA  L+ S       +  D
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
            V++ TLI G  +  + + A  ++D+M     +P+  TYNA++ GL ++ K E+A  M+ 
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI-----VTCNILLSG 369
            ++  G+ PD  T++ ++  FC   +V++AL+  + M  +   P++     VT NIL++G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            C+ G  E+A   F   + K    D +T+  LI  LCK  ++E A  +L  M    + P+
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY A+   L +SGR+EEA +F   MV +G +                 P SI+Y   +
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV-----------------PDSITYGSLV 403

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
              C   R  DALQ+  E +  G   +  TY  L++GL K  K+
Sbjct: 404 YALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKT 447



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 57/107 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  PD VTYN ++D L+K GK  +   +L +M  +G  P+  T+    SG  + G 
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           L   M ++ ++     LPD  T + +++  C +G L++   + KE E
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/467 (33%), Positives = 261/467 (55%), Gaps = 5/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P++V Y T++ AL K+ ++NE   LL +M   G +P+  T+N ++ G C+L  
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E  ++VD M      P+  TY +L+NG C  G ++EA  L  ++ +    P+ V +  
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTI 349

Query: 121 LINRFFESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LIN + +SGR  EA   L D++ ++G +P+  T N +I   CK+G +  A  +V +M  N
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +P+ +TY TL+D  CK   +EEA  +++ M  KG ++N +  N +L  LC   K+ +A
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L   S +G   D  ++ TLI G  + ++   AL L+ +M    ++ +T TYN +I  
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHA 529

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + G  ++A+ ++N++L  G   DE T+N +I  FC  G  EKAL   ++MV K   P 
Sbjct: 530 FLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS 589

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            ++CN+L++GLCR G +  AL+  R  I +G A D VTYN+LI+ LCK   + +AF L +
Sbjct: 590 NISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFN 649

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +++ + + PD  TY  +      +G  ++A       VE   I + V
Sbjct: 650 KLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDV 696



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 223/405 (55%), Gaps = 5/405 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+++TY  +++ L + GK++E + LL+ +      PN   + IL++GY K G L EA
Sbjct: 308 GFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEA 363

Query: 65  MRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              + D M +N   PDV+T+N LI+G C  G++  A  +  +M +    P+++TY TL++
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLD 423

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F +  +  EA  +++E+   G + N + +N++++  CK GK+ KA  ++  M + G  P
Sbjct: 424 GFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKP 483

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T+NTLI   CK    E+A  +   M   G+  NT+T NT++H       + EA  L+
Sbjct: 484 DIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLV 543

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N    RG  LDE++Y  LI  + +     +AL L+DEM  + ++PS  + N +I GL + 
Sbjct: 544 NDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRV 603

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK   A+++L +++  G+ PD  T+N++I+G C  G + +A    NK+  +  +PD +T 
Sbjct: 604 GKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITY 663

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N L+   CR G+ + A       +      + VT+  L+S+  KE
Sbjct: 664 NTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 35/303 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ +TY T+LD   KK +L E   +L++M  +G   N   YN+L+   CK G 
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ ++  M+     PD++T+N LI G C     E+A  L ++M    ++ + VTYNT
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA----------- 169
           LI+ F   G   EA KL++++   G   + +T+N +IK +CK G  +KA           
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585

Query: 170 ---------------CKI---------VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                          C++         +R+M   G +PD VTYN+LI+  CK GN+ EAF
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + + +  +G++ + IT NT++   C     D+AY+LL    +  +  ++V++  L++ +
Sbjct: 646 NLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705

Query: 266 FRD 268
            ++
Sbjct: 706 IKE 708



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 186/402 (46%), Gaps = 26/402 (6%)

Query: 141 LDEHGI---KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           LD  G+   +P   ++N+++           A  +   M   G  P   T+  ++ A C 
Sbjct: 161 LDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCM 220

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
              ++ A  ++  M + G   N++   T++H L    +++EA  LL      G   D  +
Sbjct: 221 VNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDT 280

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  +I G  R  + +   KL D M  R   P+  TY  ++ GL + GK ++A  +LN++ 
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP 340

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQF-HNKMVEKSFKPDIVTCNILLSGLCREGIL 376
                P++  F  +I+G+   G++++A  F ++KM++   +PD+ T N L+ GLC++G++
Sbjct: 341 T----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             A+         G   + +TY TL+   CK+ +LE+A  +L+EM  K    +   Y  +
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
             AL ++G++ +A      M + G                   P   +++  I   C   
Sbjct: 457 LRALCKNGKVPKALDMLGEMSDKG-----------------CKPDIFTFNTLIFGLCKVD 499

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           R +DAL ++ +    G+  N  TY  L++  + R  +I +A+
Sbjct: 500 RKEDALALYRDMLLDGVIANTVTYNTLIHAFL-RGGAIQEAL 540



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 184/433 (42%), Gaps = 75/433 (17%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDEL----DEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
            Y+ LI++    G + E FK+ID+L     E GI         ++K+Y +     +A ++
Sbjct: 104 VYHVLIDKL---GAAKE-FKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRM 159

Query: 173 VRNME-----ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           + +M+     E  F    V  + L+ ANC +      + M+     KG+     T   ++
Sbjct: 160 LLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLS----KGVIPTVYTFGVVM 215

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC   ++D A  LL   +K G                                    +
Sbjct: 216 KALCMVNEVDNACSLLRDMTKHG-----------------------------------CV 240

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P++  Y  +I  LS+  +  +A+ +L E+   G +PD  TFN +I+G C   ++ +  + 
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            ++M+ + F P+ +T  +L++GLCR G +++A    +  + K    + V +  LI+   K
Sbjct: 301 VDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVK 356

Query: 408 ERRLEDAFGLL-SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
             RL++A   L  +M +    PD +T+  +   L + G +  A    + M   G      
Sbjct: 357 SGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG------ 410

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                        P+ I+Y+  ++  C + + ++A  +  E   KG  +N   Y  L+  
Sbjct: 411 -----------CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRA 459

Query: 527 LIKRRKSISKAVD 539
           L K  K + KA+D
Sbjct: 460 LCKNGK-VPKALD 471


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 273/522 (52%), Gaps = 17/522 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  + +T+  ++D L K  +L E     + MKK+G VPN  TYN+L++G+CK+  +  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  M ++   P+V TY+ +I+G+C    ++ A++L ++M     +P++VTYNTL++  
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +G   EA++L+DE+ E G++P+  +++ ++   CK GKID A K+  +       PD 
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+TLI   CK G ++EA ++ + M     + + +T   ++  LC   +L EA  +L +
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              R    + ++Y +LI G  +  +   A +++  M  R I P+  TYN++I G   +  
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ ++ E+  +G +PD  T+NT+I G C  G+  +A +    M  K   PD++T + 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C+   ++ A   F   + +    D VT++TL+   C    ++DA  LL EM    
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD YTY ++     + GR+ EA++    M + G       QPN            ++Y
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG------CQPNV-----------VTY 465

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  I+  C  G+   A ++ EE    G+  N  TY +L+ G 
Sbjct: 466 TALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 279/539 (51%), Gaps = 17/539 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ VTY+T++    ++ K++    L   M + G +PN  TYN L+SG C+ G 
Sbjct: 68  MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  ++D M +    PD ++Y+ L+ G C  G ++ A ++ ++  +    PDVV Y+T
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++GR  EA KL +++ E+  +P+ VT   ++   CK  ++ +A +++  ME+  
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ +TY++LID  CK G + +A  +   M  +G++ N +T N+++H  C    +D A 
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +L+   +  G   D ++Y TLI G  +  +A  A +L+ +MK +   P   TY+ +I G 
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + + A  + +++L+  ++PD  TF+T++ G+C+ G V+ A +   +MV     PD+
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ G C+ G + +A +  +    +G   + VTY  LI + C+  +   A+ LL E
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE 487

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    + P+  TY ++      +G LEEA+K    +                +  E    
Sbjct: 488 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL----------------ERDENCKA 531

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +Y   ++  C  GR   AL++ E  +Q G       Y+ L+ GL +  K + KA++
Sbjct: 532 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ-GKELGKAME 589



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 260/539 (48%), Gaps = 52/539 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P+ VTYNT+L  L + G ++E  +LL +M+++GL P++ +Y+ L++G CK G +  A
Sbjct: 107 GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 166

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V +  +     PDV  Y+ LI G C  G L+EA +L ++M      PDVVT+  L++ 
Sbjct: 167 LKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDG 226

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++++ +++    PN +T++ +I   CK G++  A ++ + M   G  P+
Sbjct: 227 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+LI   C    ++ A  +M+ M   G   + IT NT++  LC   +  EA  L  
Sbjct: 287 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 346

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +    D ++Y  LI G+ + E+ + A  L+D+M ++ ++P   T++ ++ G   +G
Sbjct: 347 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 406

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + A  +L E++ S   PD  T+ +++ GFC  G++ +A +   +M ++  +P++VT  
Sbjct: 407 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 466

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI---------------------- 402
            L+   CR G    A K     +  G   + +TY +LI                      
Sbjct: 467 ALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERD 526

Query: 403 --------------SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
                           LC+  R+  A  LL  +++    P    Y A+   L +   L +
Sbjct: 527 ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 586

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           A +    M  + K                  P++ +Y   I E   +GR+++A  + +E
Sbjct: 587 AMEVLEEMTLSRKSR----------------PNAEAYEAVIQELAREGRHEEANALADE 629



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 201/381 (52%), Gaps = 2/381 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+ +TY++++D L K G++ + +++   M  +G+ PN  TYN L+ G+C    
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +++ MT    LPD+ TYN LI+G C  G   EA RL  +M++    PDV+TY+ 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +  R   A  L D++ +  + P+ VT + +++ YC  G +D A +++  M  + 
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  TY +L+D  CK G M EA R++  M ++G + N +T   ++   C   K   AY
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWG 299
            LL      G   + ++Y +LI G+        A K+ + + ++       F Y  M+ G
Sbjct: 483 KLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDG 542

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM-VEKSFKP 358
           L ++G+   A+++L  + QSG  P    +  +I G C   ++ KA++   +M + +  +P
Sbjct: 543 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 602

Query: 359 DIVTCNILLSGLCREGILEKA 379
           +      ++  L REG  E+A
Sbjct: 603 NAEAYEAVIQELAREGRHEEA 623



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 182/319 (57%), Gaps = 2/319 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GCLPD +TYNT++D L K G+  E   L  DMK +   P+  TY+ L+ G+CKL  
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + D M +   LPDV T++ L+ G+CNAG++++A RL +EM +    PDV TY +
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + GR +EA +++  + + G +PN VT+  +I  +C+ GK   A K++  M  NG
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEA 239
             P+ +TY +LI   C  G++EEA +M++ + R +  K +      ++  LC   ++  A
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAA 552

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK-ERQIMPSTFTYNAMIW 298
             LL +  + G       Y  LI G  + ++  +A+++ +EM   R+  P+   Y A+I 
Sbjct: 553 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQ 612

Query: 299 GLSQSGKTEQAIDMLNELL 317
            L++ G+ E+A  + +ELL
Sbjct: 613 ELAREGRHEEANALADELL 631


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/467 (33%), Positives = 263/467 (56%), Gaps = 5/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+ + Y T++ AL K G++NEV  LL +M   G +P+  T+N  + G CK+  
Sbjct: 261 MTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLR 320

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++VD M      P+ +TY +L++G C  G ++EA  L  ++ +    P+VV +NT
Sbjct: 321 IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNT 376

Query: 121 LINRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LIN +   GR  EA  ++ E +   G  P+  T+N +I   CK+G +  A +++  M+  
Sbjct: 377 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 436

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P+ +TY  LID  CK G +EEA  ++D M  KGL +N +  N ++  LC ++K+ +A
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +    S +G   D  ++ +LI G  +  K   AL L+ +M    ++ +T TYN +I  
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 556

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + G  ++A+ ++N++L  G   D+ T+N +I   C  G +EK L     M+ K   P+
Sbjct: 557 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 616

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            ++CNIL++GLCR G ++ AL+F R  I +G   D VTYN+LI+ LCK  R ++A  L  
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFD 676

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +++ + + PD  TY  + +   + G  ++A    S  V++G I ++V
Sbjct: 677 KLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEV 723



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/444 (33%), Positives = 242/444 (54%), Gaps = 5/444 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+PD  T+N  +  L K  +++E   L+  M  +G  PN  TY +L+ G C++G + EA
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE-MESLKLLPDVVTYNTLIN 123
             +++ +      P+V  +N LING+ + G L+EA  +  E M S+   PD+ TYNTLI 
Sbjct: 360 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G  + A +L++E+   G +PN +T+ I+I  +CKEG++++A  ++  M   G + 
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V YN LI A CK   +++A  M   M  KG K +  T N+++  LC   K +EA  L 
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   + ++Y TLI  + R      ALKL ++M  R       TYN +I  L ++
Sbjct: 536 QDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRA 595

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+ + +  +++  G+ P+  + N +I+G C  G ++ AL+F   M+ +   PDIVT 
Sbjct: 596 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 655

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L++GLC+ G  ++AL  F    ++G   D++TYNTLIS  CKE   +DA  LLS   +
Sbjct: 656 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 715

Query: 424 KKLGPDRYTYAAIHTALVESGRLE 447
               P+  T+  + +  ++ G  E
Sbjct: 716 SGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 163/527 (30%), Positives = 267/527 (50%), Gaps = 24/527 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+  ++ AL    +++    LL DM + G VPN   Y  L+    K+G + E 
Sbjct: 230 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEV 289

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M     +PDV T+N  I+G C    + EA +L   M      P+  TY  L++ 
Sbjct: 290 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 349

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-NMEENGFSP 183
               G+  EA  L++++      PN V  N +I  Y   G++D+A  ++  +M   G  P
Sbjct: 350 LCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYNTLI   CK G +  A  +M+ M  KG + N IT   ++   C E +L+EA  +L
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  S +G  L+ V Y  LI+   +DEK   AL ++ +M  +   P  FT+N++I+GL + 
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K E+A+ +  ++L  G+I +  T+NT+IH F   G +++AL+  N M+ +    D +T 
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+  LCR G +EK L  F   + KG   ++++ N LI+ LC+   ++ A   L +M  
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           + L PD  TY ++   L ++GR +EA   F  + VE                   I P +
Sbjct: 646 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG------------------ICPDA 687

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+Y+  I+ HC +G + DA  +       G   N+ T+  L++  IK
Sbjct: 688 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 182/342 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TYNT++  L KKG L   R+L+++M+ +G  PN  TY IL+  +CK G 
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  V+D M+      +   YN LI+  C    +++A  +  +M S    PD+ T+N+
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  +  EA  L  ++   G+  N +T+N +I  + + G + +A K+V +M   G
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D +TYN LI A C+AGN+E+   + + M  KGL  N I+ N +++ LC    +  A 
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG   D V+Y +LI G  +  +A  AL L+D+++   I P   TYN +I   
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 697

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            + G  + A  +L+  + SG IP+E T+  ++  F  EG  E
Sbjct: 698 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 188/422 (44%), Gaps = 31/422 (7%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            Y  LI++   +G       L+ ++ + GI        +++K Y + G   +A +++ +M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 177 E-----ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                 E  F    V  + L+  NC        + M+     KG+     T   ++  LC
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS----KGISPTVYTFGVVMKALC 246

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              ++D A  LL   ++ G   + + Y TLI    +  + N  LKL +EM     +P   
Sbjct: 247 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVN 306

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T+N  I GL +  +  +A  +++ +L  G  P+  T+  ++HG C  G+V++A    NK+
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 366

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERR 410
                 P++V  N L++G    G L++A       +L  G   D  TYNTLI  LCK+  
Sbjct: 367 P----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 422

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L  A  L++EM+ K   P+  TY  +     + GRLEEA+     M   G          
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG---------- 472

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  +  +++ Y+  I+  C   + +DAL +F +   KG   +  T+ +L+ GL K 
Sbjct: 473 -------LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525

Query: 531 RK 532
            K
Sbjct: 526 NK 527


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 255/467 (54%), Gaps = 5/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+++ Y T++DAL K+ +++E   LL +M   G  P+  T+N ++ G+C+L  
Sbjct: 236 MTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNR 295

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E  ++VD M      P+  TY  L++G C    ++EA  L  ++      P+VV +NT
Sbjct: 296 VLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNT 351

Query: 121 LINRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           L+N F  +GR  EA   + D++  +G  P+  T + ++   CK+G    A ++V +M+  
Sbjct: 352 LVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK 411

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P+  TY  LID  CK G +EEA  ++  M  KG  +NT+  N ++  LC   K+ EA
Sbjct: 412 GCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEA 471

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +    S +G   D  ++ +LI G  R ++   AL L+ +M    ++ ++ T+N +I  
Sbjct: 472 LDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHA 531

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + G+ ++A+ ++N++L  G   DE T+N +I   C  G VEK L    +M+ K   P 
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I+TCNIL++G C  G +  AL+F R  I +G + D VTYN+LI+ LCK  R+++A  L  
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE 651

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +++ + + PD  TY  +   L   G  ++A       VE G + + V
Sbjct: 652 KLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDV 698



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 155/567 (27%), Positives = 267/567 (47%), Gaps = 49/567 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           + C P   +YN +LD L      +   ++  DM  +G+ PN  T+ +++   C +  +  
Sbjct: 169 YCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDN 228

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  ++  MT++  +P+   Y  LI+       ++EA +L +EM  +   PDV T+NT+I 
Sbjct: 229 ACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIY 288

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI----------- 172
            F    R +E  KL+D +   G  PN +T+  ++   CK  +ID+A  +           
Sbjct: 289 GFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVH 348

Query: 173 --------VRN-------------MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                   VRN             M  NG+ PD  T++TL++  CK G    A  +++ M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG K N  T   ++   C + +L+EA ++L     +G+ L+ V Y  LI+   +  K 
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + AL ++ EM  +   P  FT+N++I+GL +  + E A+ +  +++  G+I +  TFNT+
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IH F   G++++AL+  N M+ +    D +T N L+  LC+ G +EK L  F   I KG 
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
               +T N LI+  C   ++ +A   + +M  +   PD  TY ++   L + GR++EA  
Sbjct: 589 TPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALN 648

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               +                   E I P SI+Y+  I   C +G + DA  +     + 
Sbjct: 649 LFEKL-----------------QAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVEN 691

Query: 512 GIAINKSTYMNLMNGLIKRRKSISKAV 538
           G   N  T+  L+    K+  S  + +
Sbjct: 692 GFVPNDVTWNILVYNFGKQSNSEGQTI 718



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 155/307 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++D   KKG+L E   +L +M  +G   N   YN L+S  CK G 
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +   M+     PD++T+N LI G C    +E+A  L ++M    ++ + VT+NT
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   G   EA KL++++   G   + +T+N +IK  CK G ++K   +   M   G
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  +T N LI+  C AG +  A   M  M  +G   + +T N++++ LC   ++ EA 
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D ++Y TLI    R+   + A  L     E   +P+  T+N +++  
Sbjct: 648 NLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNF 707

Query: 301 SQSGKTE 307
            +   +E
Sbjct: 708 GKQSNSE 714


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 252/455 (55%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD+VTYNT+++ L K  +L++   LL +M   G  PN  +YN ++ G+CK   ++ A+
Sbjct: 226 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 285

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +++ M      PDV +Y  +ING C    ++EA R+  +M      P+V+TY TL++ F
Sbjct: 286 WLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G    A +L+ ++ E G +PNA+T+N ++  +C+   +++A ++++ M + G  PD 
Sbjct: 346 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDA 405

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           + Y+T+I   CKAG + EA  +++ M R+G + +   L+T++  LC    +D A  LL  
Sbjct: 406 INYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRM 465

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
           +       D V+Y  LI    + ++   A    D M + +  P   TYN+++ GL +S +
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
              A  + + +  +G++PD  T++ +IH FC +  ++ A +   +M E    PD+VT + 
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++GLC+ G ++KA   F+  +  G A + VTYNTLI  LCK  ++E A  +L  M ++ 
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             PD  TY  +   L  + RLEEA +    M + G
Sbjct: 646 CTPDSITYTCLINGLCNASRLEEAWRVLREMKDKG 680



 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 167/552 (30%), Positives = 287/552 (51%), Gaps = 40/552 (7%)

Query: 2    EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            E   C PD  TY+TI+D+L K GK+++   L+ DM  +G  PN  TY+ L+ G CK G L
Sbjct: 940  ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999

Query: 62   KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             EA  ++  MT++   P++ TYN +I+G C  G ++EA+ L +EM      P+VVTY  L
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059

Query: 122  INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG- 180
            ++ F + G++ +A  L++ + E G  PN  T+N ++  +CK+ ++++AC+++ +M + G 
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 1119

Query: 181  ----------------------------------FSPDCVTYNTLIDANCKAGNMEEAFR 206
                                                PD VT+NT+IDA CK   ++ A+ 
Sbjct: 1120 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 1179

Query: 207  MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-YMLLNSASKRGYYLDEVSYGTLITGY 265
            + +++   G   N +T N+++H LC  ++ D+A Y+L     K+G   D ++Y T+I G 
Sbjct: 1180 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 1239

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             + ++ +RA KL+ +M    + P   TY+ +I  L +    ++A ++L  +L++G  P  
Sbjct: 1240 CKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA 1299

Query: 326  TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
             T+ T+I GFC  G ++KAL+    ++ K   PD+VT +I +  L + G L +A +   +
Sbjct: 1300 ITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLET 1359

Query: 386  WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
             +  G   D+VTYNTL+   C     EDA  L   M +    PD  TY  +   LV+   
Sbjct: 1360 MLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKS 1419

Query: 446  LEE-AQKFTSIMVETG-KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
             ++   + +  MV+TG K+NH++     +    E D         +   C  G  +DA +
Sbjct: 1420 YKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKC--GSPQDARK 1477

Query: 504  IFEETRQKGIAI 515
            +FE   Q+ + +
Sbjct: 1478 VFEGMDQRNVVL 1489



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 287/546 (52%), Gaps = 20/546 (3%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            C P+  T+  ++  L + G +    +LL +M + G+  N   +N+++ G C    L  A+
Sbjct: 873  CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932

Query: 66   RVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M ++ S  PDV+TY+ +++    +G +++A RL ++M S    P+VVTY++L++ 
Sbjct: 933  ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              ++G+  EA  L+  +   G  PN VT+N +I  +CK G+ID+A  ++  M + G  P+
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             VTY  L+DA CK G  E+A  +++VM  KG   N  T N++L   C + +++ A  LL+
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            S  ++G   + VSY T+I G  +  K +  + L ++M     +P   T+N +I  + ++ 
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTC 363
            + + A ++ N + +SG  P+  T+N+++HG C   + ++A     +M  K    PDI+T 
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232

Query: 364  NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            N ++ GLC+   +++A K F   +  G A D VTY+ +ISSLCK R +++A  +L  M +
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292

Query: 424  KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV----------QPNTSK 473
                P   TY  +     ++G L++A +   +++  G     V           +    +
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 1352

Query: 474  TPEEID--------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
              E ++        P +++Y+  +   C     +DA+ +FE  RQ G   + +TY  L+ 
Sbjct: 1353 AGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVG 1412

Query: 526  GLIKRR 531
             L+ ++
Sbjct: 1413 HLVDKK 1418



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 161/527 (30%), Positives = 280/527 (53%), Gaps = 23/527 (4%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            D  T N +L AL +   L   +D L   + K    PN  T+ IL+ G C+ G +  A  +
Sbjct: 843  DTYTCNCLLQALLR---LKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYEL 899

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFF 126
            +  M ++    +V  +N++I G C+A  L+ A  L KEM ES    PDV TY+T+++   
Sbjct: 900  LKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLV 959

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +SG+  +A +L++++   G  PN VT++ ++   CK GK+D+A  +++ M  +G SP+ V
Sbjct: 960  KSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 1019

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            TYNT+ID +CK G ++EA+ +++ M   G + N +T   +L   C   K ++A  L+   
Sbjct: 1020 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 1079

Query: 247  SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             ++GY  +  +Y +L+  + + ++  RA +L   M ++  +P+  +YN +I GL ++ K 
Sbjct: 1080 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139

Query: 307  EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             + + +L ++L +  +PD  TFNTII   C   +V+ A +  N + E    P++VT N L
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 1199

Query: 367  LSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            + GLC+    ++A    R    K G + D +TYNT+I  LCK +R++ A+ L  +M    
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 1259

Query: 426  LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
            L PD  TY+ + ++L +   ++EA     +M++ G                  DP +I+Y
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG-----------------FDPGAITY 1302

Query: 486  SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               I+  C  G    AL+I +    KG   +  T+   ++ L KR +
Sbjct: 1303 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 1349



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/442 (31%), Positives = 240/442 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD V+Y T+++ L K  +++E   ++  M ++G  PN  TY  LV G+C++G L  A
Sbjct: 295 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 354

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V  MT+    P+  TYN +++ +C    +E A ++ + M      PD + Y+T+I+ 
Sbjct: 355 VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG 414

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G+  EA  L++++   G +P+    + +I   CK   ID A +++R       +PD
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPD 474

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y+ LI A CKA  + EA   +DVM +     + +T N+++  LC  +++++A++L +
Sbjct: 475 VVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD 534

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D V+Y  +I  + +D   + A K+ + MKE + +P   TY+A+I GL ++G
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A D+  E+L  G  P+  T+NT+I G C   +VE+A +    M ++S  PD +T  
Sbjct: 595 TVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYT 654

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++GLC    LE+A +  R    KG   D +TY TL+ +L K   LE    LL EME  
Sbjct: 655 CLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEAT 714

Query: 425 KLGPDRYTYAAIHTALVESGRL 446
           + G      A +H  ++    L
Sbjct: 715 EEGQWNANGARLHRFVIRGDVL 736



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 249/519 (47%), Gaps = 18/519 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L+ L K  + ++  DL     +     +  TY+ L+SG+ + G +  A  + D M +
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
                    +  ++ G C+AG   +A    +EM S    PD VTYNT+IN   +S R  +
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDD 248

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +L++E+ ++G  PN  ++N ++  +CK  +++ A  ++  M   G  PD V+Y T+I+
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK   ++EA R+MD M ++G + N IT  T++   C    LD A  L+   ++RGY  
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + ++Y  ++  + R     RA ++   M +    P    Y+ +I G  ++GK  +A D+L
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            ++++ G  PD    +T+I   C    ++ A +     +     PD+V  +IL+  LC+ 
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA 488

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             L +A  +    +      D VTYN+++  LCK RR+ DAF L   M    + PD  TY
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
           + +  +  +   L+ A K    M E   +                 P  ++YS  IN  C
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLERMKEAKCV-----------------PDVVTYSALINGLC 591

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             G    A  +F+E    G A N  TY  L++GL K  K
Sbjct: 592 KAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINK 630



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 253/512 (49%), Gaps = 62/512 (12%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC P+ VTY  +LDA  K GK  +   L+  M ++G VPN  TYN L+  +CK   ++ A
Sbjct: 1048 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 1107

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++  M Q   +P+V +YN +I G C A  + E   L ++M S   +PD+VT+NT+I+ 
Sbjct: 1108 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 1167

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSP 183
              ++ R   A++L + + E G  PN VT+N ++   CK  + D+A  ++R M  + G SP
Sbjct: 1168 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 1227

Query: 184  DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            D +TYNT+ID  CK+  ++ A+++   M   GL  + +T + ++ +LC  + +DEA  +L
Sbjct: 1228 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 1287

Query: 244  NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                K G+    ++YGTLI G+ +    ++AL++   +  +   P   T++  I  LS+ 
Sbjct: 1288 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 1347

Query: 304  GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL------------------ 345
            G+  QA ++L  +L++G++PD  T+NT++ GFC     E A+                  
Sbjct: 1348 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407

Query: 346  ------------------QFHNKMVEKSFK----------------PDI-VTCNIL-LSG 369
                              +    MV+  FK                 D+ + C I+ + G
Sbjct: 1408 TTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFG 1467

Query: 370  LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
             C  G  + A K F     +    + V ++ ++      ++ E AFGL   M  + + PD
Sbjct: 1468 KC--GSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPD 1521

Query: 430  RYTYAAIHTALVESGRLEEA-QKFTSIMVETG 460
              T+ ++ T    +G L+ A  +F SI  + G
Sbjct: 1522 AVTFLSLLTMCCHAGLLDAAVDEFVSISRDYG 1553



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 160/605 (26%), Positives = 261/605 (43%), Gaps = 77/605 (12%)

Query: 3    GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            G  C PD V Y+ ++ AL K  +L E    L  M K    P+  TYN +V G CK   + 
Sbjct: 468  GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527

Query: 63   EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            +A  + D M     +PDV TY+++I+ +C    L+ AF++ + M+  K +PDVVTY+ LI
Sbjct: 528  DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587

Query: 123  NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
            N   ++G   +AF +  E+   G  PN VT+N +I   CK  K+++A +++  M +   +
Sbjct: 588  NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT 647

Query: 183  PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            PD +TY  LI+  C A  +EEA+R++  M  KG   + +T  T+L  L     L+    L
Sbjct: 648  PDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707

Query: 243  LN--SASKRGYY------------LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            L    A++ G +              +V    +           R L   D+  +    P
Sbjct: 708  LKEMEATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRP 767

Query: 289  STFTYNAMIWGLSQSGKTEQAIDMLN-----ELLQSGMIPDETTFNTIIHGFCSEG--QV 341
              +   A+    +Q G   + + +LN     E  ++ +        T + G   +G    
Sbjct: 768  HQYRVTAVA---TQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNG 824

Query: 342  EKALQFHN-KMVEKSFKPDIVTCNILLS-------------------------------- 368
            + AL F +    ++ +  D  TCN LL                                 
Sbjct: 825  DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILI 884

Query: 369  -GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KL 426
             GLCR G +  A +  +     G   + + +N +I  LC  R+L+ A  L  EMEE    
Sbjct: 885  HGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSC 944

Query: 427  GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---------KINHQVVQPN------- 470
             PD +TY+ I  +LV+SG++++A +    MV  G          + H + +         
Sbjct: 945  PPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATA 1004

Query: 471  --TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                 T     P+ ++Y+  I+ HC  GR  +A  + EE    G   N  TY  L++   
Sbjct: 1005 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 1064

Query: 529  KRRKS 533
            K  K+
Sbjct: 1065 KCGKA 1069



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 244/556 (43%), Gaps = 47/556 (8%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M G GC P+ VTYNT++D L K  K+ +  ++L  M+KQ   P+  TY  L++G C    
Sbjct: 606  MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES----------LK 110
            L+EA RV+  M     LPD  TY  L+        LE   +L KEME+           +
Sbjct: 666  LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGAR 725

Query: 111  LLPDVVTYNTLINRFFESGRSMEA-FKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDK 168
            L   V+  + L+        ++ +  +++D  D+ G   P    H   +     +G    
Sbjct: 726  LHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRP--HQYRVTAVATQGGFHH 783

Query: 169  ACKIVRNM--------EENGFSPDCVTYNTLIDANCKAG--NMEEAFRMMD-VMGRKGLK 217
              KIVR +         E           T +      G  N + A    D    ++G  
Sbjct: 784  --KIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYN 841

Query: 218  MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
             +T T N +L  L   K+  +A  +    +K     +  ++  LI G  R      A +L
Sbjct: 842  HDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIGTAYEL 899

Query: 278  WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFC 336
              EM    +  +   +N +I GL  + K + A+++  E+ +SG   PD  T++TI+    
Sbjct: 900  LKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLV 959

Query: 337  SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
              G+V+ A +    MV K   P++VT + LL GLC+ G L++A    +     G + + V
Sbjct: 960  KSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 1019

Query: 397  TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            TYNT+I   CK  R+++A+ LL EM +    P+  TY  +  A  + G+ E+A     +M
Sbjct: 1020 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 1079

Query: 457  VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
            VE G +                 P+  +Y+  ++  C +   + A Q+     QKG   N
Sbjct: 1080 VEKGYV-----------------PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 1122

Query: 517  KSTYMNLMNGLIKRRK 532
              +Y  ++ GL K  K
Sbjct: 1123 VVSYNTVIAGLCKATK 1138



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 51/351 (14%)

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           R G +      N +L+ L    +  +A+ L  S  +  +  D V+Y TLI+G+ R  K  
Sbjct: 119 RDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKIL 178

Query: 273 RALKLWDEMKERQIM----------------------------------PSTFTYNAMIW 298
            A +L+DEM  + +                                   P + TYN MI 
Sbjct: 179 PAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMIN 238

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GLS+S + + AI +L E++ +G  P+  ++NT++HGFC   +VE AL    +MV +   P
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+V+   +++GLC+   +++A +     I +G   + +TY TL+   C+   L+ A  L+
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            +M E+   P+  TY  I         +E A +   +M++TG                  
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG-----------------C 401

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            P +I+YS  I+  C  G+ ++A  + E+  ++G   + +    L++ L K
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 18/284 (6%)

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           ++ GY  +      L+    +  + ++A  L+    E Q    T TY+ +I G  ++GK 
Sbjct: 118 TRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKI 177

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A ++ +E+ + G+        +I+ G C  GQ   A+  H + + K+  PD VT N +
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTM 236

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           ++GL +   L+ A++     +  G A +  +YNT++   CK  R+E+A  LL +M  +  
Sbjct: 237 INGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGC 296

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  +Y  +   L +  +++EA +    M++ G       QPN            I+Y 
Sbjct: 297 PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG------CQPNV-----------ITYG 339

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             ++  C  G    A+++  +  ++G   N  TY N+M+   +R
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRR 383



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 164/391 (41%), Gaps = 89/391 (22%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC PD +TYNT++D L K  +++    L   M   GL P+  TY+I++S  CK  ++ EA
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF------------------------ 100
              V++LM +N   P   TY  LI+G+C  G L++A                         
Sbjct: 1284 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDW 1343

Query: 101  -----RLRKEMESLK------LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                 RLR+  E L+      L+PD VTYNTL+  F ++  + +A  L + + + G +P+
Sbjct: 1344 LSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPD 1403

Query: 150  AVTHNIMIKWYC-KEGKIDKACKIVRNMEENGF--------------------------- 181
              T+  ++     K+   D   ++ ++M + GF                           
Sbjct: 1404 NATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIV 1463

Query: 182  -------SP-------------DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
                   SP             + V ++ ++         E+AF +  VMG +G++ + +
Sbjct: 1464 DMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAV 1523

Query: 222  TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV--SYGTLITGYFRDEKANRALKLWD 279
            T  ++L T+CC   L +A +    +  R Y L+     +  +I    R    N A  L  
Sbjct: 1524 TFLSLL-TMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLML 1582

Query: 280  EMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             M  +   PS  T+N ++      G  E+A+
Sbjct: 1583 GMPCK---PSAATWNCLLSAYKICGDFERAL 1610



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 93/177 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PD VTY+ ++ +  K   L+    +L  MK+   VP+  TY+ L++G CK G 
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  V   M      P++ TYN LI+G C    +E+A  + + M      PD +TY  
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           LIN    + R  EA++++ E+ + G  P+ +T+  +++   K   ++   ++++ ME
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 35/233 (15%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ----GLVPNRTTYNIL----- 51
            M   GC PDN TY T++  L  K      +DLL+++ K     G   N    + L     
Sbjct: 1395 MRQCGCEPDNATYTTLVGHLVDK---KSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIE 1451

Query: 52   -----------VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF 100
                       V  + K G  ++A +V + M Q     +V  ++ ++  +      E+AF
Sbjct: 1452 VEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAF 1507

Query: 101  RLRKEMESLKLLPDVVTYNTLINRFFESG---RSMEAFKLIDELDEHGIKPNAVTHNIMI 157
             L + M    + PD VT+ +L+     +G    +++ F  I    ++G++P     + +I
Sbjct: 1508 GLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISR--DYGLEPGVDHFSCVI 1565

Query: 158  KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
                + G +++A  ++  M      P   T+N L+ A    G+ E A R+ ++
Sbjct: 1566 DLLGRLGLVNEAEDLMLGMP---CKPSAATWNCLLSAYKICGDFERALRVAEL 1615


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  285 bits (728), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 166/539 (30%), Positives = 273/539 (50%), Gaps = 17/539 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P +V Y  ++D   ++G   E   +  +M  +G+  N  TYN LV G CK G +++A
Sbjct: 336 GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA 395

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M      PD  TYN +I G+           L  EM+   L+P   T   +IN 
Sbjct: 396 DALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIING 455

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   +A ++ + +   G+KPNAV +  +IK + +EG+  +A +I++ M++ G  PD
Sbjct: 456 LCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YN++I   CK+  MEEA   +  M  +GLK N  T   ++H  C   ++  A     
Sbjct: 516 VLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFK 575

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   ++V    LI GY ++     A  ++  M  R + P   TY+A+I GL ++G
Sbjct: 576 EMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNG 635

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+++L+E L+ G++PD  T+N+II GFC +G + KA Q H  M +K   P+I+T N
Sbjct: 636 KLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYN 695

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++GLC+ G +E+A + F     KG A ++VTY T+I   CK   L  AF L  EM  K
Sbjct: 696 ALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLK 755

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA-----QKFTSIMVETGKINH---------QVVQPN 470
            + PD + Y+A+     + G  E+A     +        T  +N          +V++ N
Sbjct: 756 GVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEAN 815

Query: 471 T---SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                   + + P  ++Y+  I+ HC  G  K+A Q F + +++ +  N  TY  L++G
Sbjct: 816 QLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSG 874



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/531 (30%), Positives = 274/531 (51%), Gaps = 18/531 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           L D  TY  +++A F+ G   E + LL +M+++G  P+  TYN+++ G C+ G + EA  
Sbjct: 233 LHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFE 292

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +  LM +   + DV+TY++LI+G+       EA  + +EM S  L P  V Y  LI+ F 
Sbjct: 293 LKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFM 352

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G S EAF++ +E+   G+K N  T+N ++K  CK G ++KA  ++  M   G  PD  
Sbjct: 353 RQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQ 412

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN +I+   K  N      ++  M +  L     T   I++ LC    +++A  +    
Sbjct: 413 TYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIM 472

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + V Y TLI G+ ++ +   A+++   M ++ + P    YN++I GL +S K 
Sbjct: 473 VSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKM 532

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A D L E+++ G+ P+  T+  +IHG+C  G+++ A ++  +M+     P+ V C  L
Sbjct: 533 EEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTAL 592

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+EG   +A   FR  + +    D  TY+ LI  L +  +L+ A  LLSE  EK L
Sbjct: 593 IDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD +TY +I +   + G + +A +    M + G                 I P+ I+Y+
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG-----------------ISPNIITYN 695

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
             IN  C  G  + A ++F+    KG+A N  TY  +++G  K   ++SKA
Sbjct: 696 ALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCK-SGNLSKA 745



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 266/524 (50%), Gaps = 18/524 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V Y T++    ++G+  E   +L  M K+G+ P+   YN ++ G CK   
Sbjct: 472 MVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRK 531

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA   +  M +    P+V+TY  LI+G+C +G ++ A R  KEM    + P+ V    
Sbjct: 532 MEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTA 591

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G + EA  +   +    + P+  T++ +I    + GK+  A +++    E G
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN++I   CK G + +AF++ + M +KG+  N IT N +++ LC   +++ A 
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAR 711

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   + V+Y T+I GY +    ++A +L+DEM  + + P +F Y+A+I G 
Sbjct: 712 ELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G TE+A+ +  E +Q G     ++ N ++ GFC  G+V +A Q    MV+K  KPD 
Sbjct: 772 RKEGNTEKALSLFLESVQKG-FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDH 830

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  IL+   C+ G L++A +FF     +    +++TY  L+S      R  + F L  E
Sbjct: 831 VTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K + PD  T++ +  A ++ G   +  K    M++ G         N SK    +  
Sbjct: 891 MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKG--------GNVSKNVCHV-- 940

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                   I+  C +    + L++ E+  ++G+ ++ +T   L+
Sbjct: 941 -------LIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLV 977



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 238/492 (48%), Gaps = 36/492 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD + YN+++  L K  K+ E +D L +M ++GL PN  TY  L+ GYCK G 
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A R    M      P+      LI+G+C  G   EA  + + M    + PDV TY+ 
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    +G+   A +L+ E  E G+ P+  T+N +I  +CK+G I KA ++   M + G
Sbjct: 627 LIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ +TYN LI+  CKAG +E A  + D +  KGL  N +T  TI+   C    L +A+
Sbjct: 687 ISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAF 746

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + +G   D   Y  LI G  ++    +AL L+ E  ++    ST + NA++ G 
Sbjct: 747 RLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGF 805

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH------------ 348
            +SGK  +A  +L +++   + PD  T+  +I   C  G +++A QF             
Sbjct: 806 CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865

Query: 349 -----------------------NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
                                  ++M+ K  +PD VT ++++    +EG   K LK    
Sbjct: 866 LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDD 925

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + KG  V     + LI  LC++  + +   +L ++EE+ L     T + +     ++G+
Sbjct: 926 MLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGK 985

Query: 446 LEEAQKFTSIMV 457
           ++ A +    MV
Sbjct: 986 MDGAARVLKSMV 997



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 212/421 (50%), Gaps = 1/421 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M G    PD  TY+ ++  L + GKL    +LLS+  ++GLVP+  TYN ++SG+CK G 
Sbjct: 612  MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A ++ + M Q    P++ TYN LING C AG +E A  L   +    L  + VTY T
Sbjct: 672  IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +I+ + +SG   +AF+L DE+   G+ P++  ++ +I    KEG  +KA  +     + G
Sbjct: 732  IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            F+    + N L+D  CK+G + EA ++++ M  K +K + +T   ++   C    L EA 
Sbjct: 792  FASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAE 850

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                   KR    + ++Y  L++GY    + +    L+DEM  + I P   T++ MI   
Sbjct: 851  QFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAH 910

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + G   + + +++++L+ G    +   + +I   C +  V + L+   K+ E+     +
Sbjct: 911  LKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSL 970

Query: 361  VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             TC+ L+    + G ++ A +  +S +      DS   N LI+        E+A   L +
Sbjct: 971  ATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQ 1030

Query: 421  M 421
            M
Sbjct: 1031 M 1031


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 276/549 (50%), Gaps = 22/549 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY+TI+  L K GK+ E  +++ +M ++G+ P+  TY I+V   C+ G + EA  +
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +     +   YN LING C    +E A++L +EM S    PD +TYNT+++    
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME--ENGFSPDC 185
            G+  EA +  D +   G  P+ V +N ++    KEGK+ +A  + + M+  +   +PD 
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TYNTLID  C+    +EA ++   +  KG   +T+T N+IL  L  +  +DEA  +   
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G   +  +Y  +++G+ R     R L+L++EM E++  P     NA+I  L ++ K
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A  +L E+ + G +PD  T+N ++ G C    V+KA +  + MV+    PDIV+ ++
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +L+GLC+   +  A   F   I +    D VT+N L+  LCK  +L++A  LL  M E  
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN----HQVVQP------------ 469
           + PD  T   +   L    R +EA +    MVE G +     H +V              
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487

Query: 470 ----NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
               +  K+  E  P  ++Y+  +N     GR   A+  F++    G A +   Y  LMN
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMN 547

Query: 526 GLIKRRKSI 534
           GL K+ + I
Sbjct: 548 GLRKQGRHI 556



 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 152/474 (32%), Positives = 258/474 (54%), Gaps = 6/474 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PDN+TYNTIL  L + GK++E +     M  +G  P+   YN L+    K G 
Sbjct: 106 MASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 165

Query: 61  LKEA---MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           + EA    + +D M   K  PD+ TYN LI+G+C     +EA +L K++ +   +PD VT
Sbjct: 166 VAEAWGLFKTMD-MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN+++          EA ++  ++ + G  PN  T++I++  +C+ G + +  ++   M 
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT 284

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E  FSPD +  N +ID  CKA  +++A ++++ M + G   + +T N +L  LC    +D
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A+ L ++    G   D VSY  ++ G  +  K + A  L+D M ER+++P   T+N ++
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL ++GK ++A D+L+ + +  ++PD  T  T++HG C + + ++A++    MVEK   
Sbjct: 405 DGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGK--AVDSVTYNTLISSLCKERRLEDAF 415
            D++  NI+L+GLCREG L +AL FF+S +      + D VTY TL+++L +  R++ A 
Sbjct: 465 ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAV 524

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
               +M      PD   Y  +   L + GR  +A + T  M E G ++     P
Sbjct: 525 DYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCFKAP 578



 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 267/513 (52%), Gaps = 21/513 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  + V YN +++ L K   +     LL +M  +G  P+  TYN ++SG C++G + EA
Sbjct: 75  GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEA 134

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK--EMESLKLLPDVVTYNTLI 122
            +  D M      PDV  YN L++     G + EA+ L K  +M   K+ PD++TYNTLI
Sbjct: 135 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLI 194

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F    ++ EA KL  ++   G  P+ VT+N ++    ++  +D+A ++ + M ++G +
Sbjct: 195 DGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCA 254

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+  TY+ ++  +C+ GNM     + + M  K    + +  N ++  LC  KK+D+A+ +
Sbjct: 255 PNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKV 314

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L   SK G   D V+Y  L+ G  +    ++A +L+  M +    P   +Y+ ++ GL +
Sbjct: 315 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 374

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           + K   A  + + +++  ++PD  TFN ++ G C  G++++A    + M E +  PD VT
Sbjct: 375 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVT 434

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM- 421
           C  L+ GLCR+   ++A++ F+  + KG   D + +N +++ LC+E +L  A      M 
Sbjct: 435 CTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMV 494

Query: 422 -EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
             + +  PD  TY  +  AL+E+GR+++A  +   M  +G                   P
Sbjct: 495 KSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSG-----------------CAP 537

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             ++Y+  +N    QGR+  A ++ +  ++KG 
Sbjct: 538 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 149/285 (52%), Gaps = 20/285 (7%)

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           +++G+  D V+Y T+I+G  +  K   AL++ +EM E+ + P   TY  ++  L ++GK 
Sbjct: 2   AEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKV 61

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A ++ +++++ G   +   +N +I+G C +  +E+A +   +M  K ++PD +T N +
Sbjct: 62  DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS--EMEEK 424
           LSGLCR G + +A +FF S   +G + D V YN L+ +L KE ++ +A+GL    +M ++
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV----------QPNTSKT 474
           K+ PD  TY  +        + +EA K    ++  G +   V           + N  + 
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 475 PEEID--------PSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
            E           P+  +YS  ++ HC  G     L+++EE  +K
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK 286


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 171/527 (32%), Positives = 272/527 (51%), Gaps = 17/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TYNT++D L K G+ +E   LL++M+  G VP+  TYN L+S   K G 
Sbjct: 70  MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +   M +   +PD +TYN LI G    G  ++A  L +EME     PDV+TY++
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    + G +++AFKL  E+   G KP+++T   ++    K G++D A +++  M+E G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYN LI    K G++ EA+ ++D M R G K + +T + ++  L    +LDEA 
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K G   D ++Y TLI G  +    N A +L+D MK +   P   TY+ +I  L
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + E A  +  E+   G+ PD  T+ +II      GQV+ A +  ++M  K   PD+
Sbjct: 370 GKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDV 429

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N  L+ L R G  ++A K F      G   D  TY+ L+  L K + ++DA GLL E
Sbjct: 430 ITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKE 489

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           + E+    D   +      L   G ++EA              H+++Q   SK    + P
Sbjct: 490 LIEQGCAFDSLKFDECLEILTSWGNVDEA--------------HELLQFANSKG---LWP 532

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            + SY+  I+     GR  +A    E+ +++G   +  +Y +L++ L
Sbjct: 533 GASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 279/548 (50%), Gaps = 21/548 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GF   P+ VTYN++L+AL K G+  E + L  ++K     P+  +Y+ L++   + G 
Sbjct: 1   MKGFPS-PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGK 59

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+ VV  M      P++WTYN L++    AG  +EA RL  EM     +PDV TYN 
Sbjct: 60  WEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNC 119

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++GR  EAF L  E+ E G  P+  T+N +I    K G+  KA +++  ME +G
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY++LI    K G   +AF++   M R+G K ++IT   ++  L    ++D+A 
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   +RG     V+Y  LI G+ +      A  L DEMK     P   TY+ +I GL
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + ++A  +L ++ + G  PD  T+NT+I+G    G +  A +  ++M  K   PD+
Sbjct: 300 IKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + L++ L +   +E A   F      G   D  TY ++I+ L K  +++DA  L SE
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI----NHQVVQPNTSKTPE 476
           M  K L PD  TY A   +L   GR +EA+K    M E+G +     +  +    SKT +
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKT-K 478

Query: 477 EIDPSSISYSEKINEHC---------------SQGRYKDALQIFEETRQKGIAINKSTYM 521
           E+D +     E I + C               S G   +A ++ +    KG+    S+Y 
Sbjct: 479 EVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYN 538

Query: 522 NLMNGLIK 529
            L++ L K
Sbjct: 539 ALIDALAK 546



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 157/490 (32%), Positives = 266/490 (54%), Gaps = 17/490 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           PN  TYN L++   K G  +EA  + + +   K  PDV +Y+ LIN    AG  E A  +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             EM++    P++ TYNTL++   ++G+  EA +L+ E+ ++G  P+  T+N +I    K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G++ +A  +   M E G  PD  TYN+LI    K G  ++A  +++ M R G   + +T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            ++++  L  + +  +A+ L     +RG   D +++  L+    +  + + AL+L DEMK
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           ER + P   TYNA+I G  + G   +A ++L+E+ ++G  PD  T++ +I G     Q++
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +A Q   KM ++   PD +T N L++GL + G+L  A + F     KG   D VTY+TLI
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           ++L K  R+E A  L  EME   + PD +TY +I T L ++G++++A +  S M   G  
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG-- 424

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          + P  I+Y+  +N     GR+K+A +IFE+ ++ G+  + +TY  
Sbjct: 425 ---------------LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469

Query: 523 LMNGLIKRRK 532
           L+ GL K ++
Sbjct: 470 LLLGLSKTKE 479



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 250/503 (49%), Gaps = 78/503 (15%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+PD  TYN ++  L K G+L+E   L ++M+++G VP+  TYN L+ G  K+G  ++A
Sbjct: 109 GCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKA 168

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
           M +++ M ++   PDV TY+ LI G    G   +AF+L +EM                  
Sbjct: 169 MELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDA 228

Query: 107 --------ESLKLL---------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                   ++L+LL         P VVTYN LI  F + G  +EA+ L+DE+  +G KP+
Sbjct: 229 LGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPD 288

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEE------------------------------- 178
            VT++ +I    K  ++D+AC++++ ME+                               
Sbjct: 289 VVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFD 348

Query: 179 ----NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
                G +PD VTY+TLI A  KA  +E A  + + M   G++ +  T  +I+  L    
Sbjct: 349 RMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           ++D+A  L +    +G   D ++Y   +    R  +   A K++++MKE  ++P   TY+
Sbjct: 409 QVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYD 468

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA---LQFHNKM 351
           A++ GLS++ + + A  +L EL++ G   D   F+  +    S G V++A   LQF N  
Sbjct: 469 ALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANS- 527

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
             K   P   + N L+  L + G + +A         +G   D V+Y++LIS+L +  ++
Sbjct: 528 --KGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQI 585

Query: 412 EDAFGLLSEMEEK--KLGPDRYT 432
           + AF LL EM ++  KL P  Y+
Sbjct: 586 DTAFELLEEMSKRGLKLSPRSYS 608



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 199/391 (50%), Gaps = 17/391 (4%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           PN VT+N ++    K G+ ++A  +   ++   ++PD V+Y+ LI++  +AG  E A  +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +  M  KG K N  T NT++  L    + DEA  LL      G   D  +Y  LI+   +
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             + + A  L+ EM+ER  +P TFTYN++I+GL + G++++A+++L E+ + G  PD  T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           ++++I G   +G+  KA +   +M  +  KPD +T   L+  L + G ++ AL+      
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G     VTYN LI+   K   L +A+ LL EM+     PD  TY+ + T L+++ +L+
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA +    M + G                   P +I+Y+  IN     G   DA ++F+ 
Sbjct: 307 EACQVLKKMEKEG-----------------CPPDTITYNTLINGLGKAGLLNDAGRLFDR 349

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            + KG   +  TY  L+  L K  +  S  V
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACV 380



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 159/304 (52%), Gaps = 5/304 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC PD +TYNT+++ L K G LN+   L   MK +G  P+  TY+ L++   K   
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  + + M      PD++TY  +I     AG +++A RL  EM    L PDV+TYN 
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +N     GR  EA K+ +++ E G+ P+  T++ ++    K  ++D AC +++ + E G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D + ++  ++     GN++EA  ++     KGL     + N ++  L    ++ EA+
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI--- 297
             L    ++G   D VSY +LI+   +  + + A +L +EM +R +  S  +Y+ ++   
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614

Query: 298 --WG 299
             WG
Sbjct: 615 QDWG 618


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 167/567 (29%), Positives = 287/567 (50%), Gaps = 64/567 (11%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G+ C P+ V+YNT++D  FK+G++++   L  +M  QGL P+  TYN L+ G CK   + 
Sbjct: 193 GYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMD 252

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ ++  M     +PD  TYN++I G+C+ G LEEA RL K+M    L PDVVTY+ LI
Sbjct: 253 KAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTH----------------------------- 153
             + + GR  EA  + D +   G KPN+  +                             
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 372

Query: 154 ------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
                 NI+I  Y K G +DKA      M +NG  PD V+Y+T+I   CK G +E+A   
Sbjct: 373 FEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYH 432

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCE---KKLDE-AYMLLNSASKRGYYLDEVSYGTLIT 263
            + M  +GL  N I+  +++H LC     KK++E A+ ++N    RG + D +   T++ 
Sbjct: 433 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN----RGIHPDAIFMNTIMD 488

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              ++ +   A   +D +    + P   +YN +I G    GK +++I  L+ ++  G+ P
Sbjct: 489 NLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRP 548

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D  T+N++++G+   G+VE AL  + +M  K  K   +T NI+L GL + G +  A + +
Sbjct: 549 DSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELY 608

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
              + +G  +   TYNT++  LC+   +++A  +  ++  K+   D  T++ +  AL++ 
Sbjct: 609 MKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKV 668

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           GR++EA+   S MV  G +                 P  I+YS  I  H  +G  +++  
Sbjct: 669 GRIDEAKSLFSAMVLRGPV-----------------PDVITYSLMIKSHIEEGLLEESDN 711

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKR 530
           +F    + G A +     +++N +++R
Sbjct: 712 LFLSMEKNGCAADS----HMLNIIVRR 734



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 233/454 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD VTY+ ++    K G+  E R +   M ++G  PN T Y+IL+ GY   G 
Sbjct: 296 MSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 355

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +   ++DLM ++    +   +N+LI  +   G +++A     EM    L PDVV+Y+T
Sbjct: 356 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYST 415

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++GR  +A    +++   G+ PN ++   +I   C  G+  K  ++   M   G
Sbjct: 416 VIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 475

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +  NT++D  CK G + EA    D++   G+K + ++ NT++   C   K+DE+ 
Sbjct: 476 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESI 535

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+     G   D  +Y +L+ GYF++ +   AL L+ EM  + +     T N M+ GL
Sbjct: 536 KQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGL 595

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G+   A ++  +++  G      T+NT++ G C    V++AL+    +  K F+ D+
Sbjct: 596 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 655

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T +I+++ L + G +++A   F + +L+G   D +TY+ +I S  +E  LE++  L   
Sbjct: 656 RTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLS 715

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           ME+     D +    I   L+E G +  A  + +
Sbjct: 716 MEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLT 749



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 246/516 (47%), Gaps = 21/516 (4%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-DLMTQNKSLPDVWT 82
           G+L+      +   K G      T N L+ G C      +AM +V   M +    PDV++
Sbjct: 105 GRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFS 164

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMES---LKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           YN LI G C     +EA  L   M +       P+VV+YNT+I+ FF+ G   +A+ L  
Sbjct: 165 YNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFH 224

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           E+   G+ P+ VT+N +I   CK   +DKA  I+++M + G  PD  TYN +I   C  G
Sbjct: 225 EMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLG 284

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            +EEA R++  M   GL+ + +T + ++   C   +  EA  + +S  ++G   +   Y 
Sbjct: 285 QLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 344

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            L+ GY           L D M    I      +N +I   ++ G  ++A+    E+ Q+
Sbjct: 345 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQN 404

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD  +++T+IH  C  G+VE A+   N+MV +   P+I++   L+ GLC  G  +K 
Sbjct: 405 GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKV 464

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            +     I +G   D++  NT++ +LCKE R+ +A      +    + PD  +Y  +   
Sbjct: 465 EELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDG 524

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
               G+++E+ K    MV  G                 + P S +Y+  +N +   GR +
Sbjct: 525 YCFVGKMDESIKQLDRMVSIG-----------------LRPDSWTYNSLLNGYFKNGRVE 567

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           DAL ++ E  +K +     T   +++GL +  + ++
Sbjct: 568 DALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA 603



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 169/381 (44%), Gaps = 22/381 (5%)

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  +   M  +G +        LI   C  G ++ AF    +  + G ++  +TLN ++ 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 229 TLCCEKKLDEAY-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE---R 284
            LC   + D+A  M+     + GY  D  SY  LI G   ++K+  AL+L   M      
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+  +YN +I G  + G+ ++A  + +E++  G+ PD  T+N++I G C    ++KA
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           +     M +K   PD  T NI++ G C  G LE+A++  +     G   D VTY+ LI  
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---- 460
            CK  R  +A  +   M  K   P+   Y  +       G L + +    +M+  G    
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374

Query: 461 ----------KINHQVVQPNTSKTPE----EIDPSSISYSEKINEHCSQGRYKDALQIFE 506
                        H  V    +   E     + P  +SYS  I+  C  GR +DA+  F 
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434

Query: 507 ETRQKGIAINKSTYMNLMNGL 527
           +   +G++ N  ++ +L++GL
Sbjct: 435 QMVSEGLSPNIISFTSLIHGL 455



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 123/239 (51%), Gaps = 9/239 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ TYN++L+  FK G++ +   L  +M ++ +     T NI++ G  + G 
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600

Query: 61  LKEA----MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           +  A    M++VD  TQ +    + TYN ++ G C    ++EA R+ +++ S +   DV 
Sbjct: 601 IVAARELYMKMVDRGTQLR----IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVR 656

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T++ +IN   + GR  EA  L   +   G  P+ +T+++MIK + +EG ++++  +  +M
Sbjct: 657 TFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSM 716

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           E+NG + D    N ++    + G++  A   +  +  K   +   T   +L  +  EKK
Sbjct: 717 EKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEAST-AALLIPIVSEKK 774



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 23/246 (9%)

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTII-------HGFCSEGQVEKALQFHNKMVE 353
           S S   E A+++ +ELL          FN+++                  A+   N MV 
Sbjct: 25  SGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVR 84

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                      IL+   C  G L+ A   F  ++  G  V +VT N LI  LC   R +D
Sbjct: 85  SGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDD 144

Query: 414 AFGLL-SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           A  ++   M E    PD ++Y A+   L    + +EA +    M   G  N         
Sbjct: 145 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYN--------- 195

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                  P+ +SY+  I+    +G    A  +F E   +G+  +  TY +L++GL K  +
Sbjct: 196 -----CSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK-AQ 249

Query: 533 SISKAV 538
           ++ KAV
Sbjct: 250 AMDKAV 255


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 278/525 (52%), Gaps = 17/525 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD  TY  ++ A  K G + + + +L +M ++G  PN  TYN+++ G C+   L EA+ 
Sbjct: 212 LPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIE 271

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M     +PD++TY++LING+C      EA  +  EM  + L P+ +TYN LI+ F 
Sbjct: 272 LKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 331

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G   +AF++ DE+   GI+ N +  N ++   CK GK++KA +I++ M E G  PD  
Sbjct: 332 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 391

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY+ LI+ +C+  NM  AF ++D M ++ L    +T + I++ LC    L     +L   
Sbjct: 392 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 451

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + V Y TL+T + ++ +   +  + + M+E+ I+P  F YN++I G  ++ + 
Sbjct: 452 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 511

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A   L E+L+  + P+  T+   I G+   G++E A ++ N+M+     P++     L
Sbjct: 512 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 571

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+EG + +A   FR  + +    D  TY+ LI  L +  ++ +AFG+ SE++EK L
Sbjct: 572 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGL 631

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+ +TY ++ +   + G +++A +    M   G                 I+P  ++Y+
Sbjct: 632 LPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG-----------------INPDIVTYN 674

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I+  C  G  + A  +F++   +G+  N  TY  +++G  K +
Sbjct: 675 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/575 (27%), Positives = 283/575 (49%), Gaps = 54/575 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + +NT+L+ + K GK+ +  +++ +M ++G+ P+  TY++L+ G+C+   +  A  ++D 
Sbjct: 356 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 415

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M + K  P V TY+++ING C  G L+    + +EM    L P+ V Y TL+    + GR
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             E+  +++ + E GI P+   +N +I  +CK  ++++A   +  M E    P+  TY  
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
            ID   KAG ME A R  + M   G+  N      ++   C E  + EA+ +      R 
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 595

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  +Y  LI G  R+ K + A  ++ E++E+ ++P+ FTYN++I G  + G  ++A 
Sbjct: 596 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 655

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA-------------------------- 344
            +L E+   G+ PD  T+N +I G C  G++E+A                          
Sbjct: 656 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 715

Query: 345 ---------LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                     Q   +M+ +   PD    N++L+  C+E   EKAL  F+  + KG A  +
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-ST 774

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK---- 451
           V++NTLI   CK  +L++A  LL EM EK+  P+  TY ++     ++G + EA++    
Sbjct: 775 VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLE 834

Query: 452 ------------FTSIMVETGKINH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
                       +TS++     I +  +V         + I+P  ++Y   I+ +C +G 
Sbjct: 835 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 894

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +A ++ +E   KG+ ++ + Y  L+  L K+ +
Sbjct: 895 VMEACKLKDEILVKGMPMSVAAYDALIQALCKKEE 929



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 246/457 (53%), Gaps = 1/457 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY   +D   K G++       ++M   G++PN   Y  L+ G+CK G + EA  V
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 587

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +   + L DV TY++LI+G    G + EAF +  E++   LLP+  TYN+LI+   +
Sbjct: 588 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 647

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A +L++E+   GI P+ VT+NI+I   CK G+I++A  +  ++E  G +P+CVT
Sbjct: 648 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 707

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  ++D  CK+ N   AF++++ M  +G+  +    N IL+  C E+K ++A  L     
Sbjct: 708 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 767

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G+    VS+ TLI GY +  K   A  L +EM E+Q +P+  TY ++I    ++G   
Sbjct: 768 EKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 826

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +  E+ +  ++P   T+ +++HG+ + G + +      +MV K  +PD +T  +++
Sbjct: 827 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 886

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
              CREG + +A K     ++KG  +    Y+ LI +LCK+    +   LL+E+ E    
Sbjct: 887 DAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFR 946

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
               T + I      +G ++EA +    MV+ G +++
Sbjct: 947 LGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 220/415 (53%), Gaps = 1/415 (0%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            L D  TY+ ++  L + GK++E   + S+++++GL+PN  TYN L+SG CK G + +A +
Sbjct: 597  LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 67   VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +++ M      PD+ TYN+LI+G C AG +E A  L  ++E   L P+ VTY  +++ + 
Sbjct: 657  LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +S     AF+L++E+   G+ P+A  +N+++ + CKE K +KA  + + M E GF+   V
Sbjct: 717  KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STV 775

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            ++NTLI+  CK+G ++EA  +++ M  K    N +T  +++   C    + EA  L    
Sbjct: 776  SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835

Query: 247  SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +R       +Y +L+ GY      +    L++EM  + I P   TY  MI    + G  
Sbjct: 836  QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895

Query: 307  EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             +A  + +E+L  GM      ++ +I   C + +  + L+  N++ E  F+  + TC+++
Sbjct: 896  MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVI 955

Query: 367  LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
              G    G +++A +  RS +  G   ++ +   L+         ED+  LL +M
Sbjct: 956  ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 1/260 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   YN IL+   K+ K  +  DL  +M ++G   +  ++N L+ GYCK G L+EA
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEA 793

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M + + +P+  TY  LI+  C AGM+ EA RL  EM+   ++P   TY +L++ 
Sbjct: 794 NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 853

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   E   L +E+   GI+P+ +T+ +MI  YC+EG + +ACK+   +   G    
Sbjct: 854 YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMS 913

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y+ LI A CK     E  ++++ +G  G ++   T + I         +DEA  +L 
Sbjct: 914 VAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 973

Query: 245 SASKRGYYLDEVSYGTLITG 264
           S  K G+  +  S G L+ G
Sbjct: 974 SMVKFGWVSNTTSLGDLVDG 993



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 163/346 (47%), Gaps = 34/346 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD VTYN ++D L K G++   ++L  D++ +GL PN  TY  +V GYCK      A
Sbjct: 665  GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724

Query: 65   MRVVDLMTQNKSLPDVWTYNMLIN----------------------------------GW 90
             ++++ M      PD + YN+++N                                  G+
Sbjct: 725  FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGY 784

Query: 91   CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
            C +G L+EA  L +EM   + +P+ VTY +LI+   ++G   EA +L  E+ E  + P A
Sbjct: 785  CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844

Query: 151  VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             T+  ++  Y   G + +   +   M   G  PD +TY  +IDA C+ GN+ EA ++ D 
Sbjct: 845  KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 904

Query: 211  MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            +  KG+ M+    + ++  LC +++  E   LLN   + G+ L   +   +  G+     
Sbjct: 905  ILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGN 964

Query: 271  ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
             + A ++   M +   + +T +   ++ G      +E + ++L ++
Sbjct: 965  MDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 17/176 (9%)

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+ V  ++L+    + G L +A+  F            ++ N+L+  L K  ++E  + +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
              M   K+ PD YTY  + +A  + G +++A++    M E G                 
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKG----------------- 245

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             P+ ++Y+  I   C      +A+++      KG+  +  TY  L+NG    ++S
Sbjct: 246 CSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRS 301


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 263/505 (52%), Gaps = 19/505 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K GK+ +V   LS+++++G+ P+  TYN L+S Y   G ++EA  ++  M
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAM 286

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V+TYN +ING C  G  E A  +  EM    L PD  TY +L+    + G +
Sbjct: 287 PSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDA 346

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +E   +  ++    + P+ V  + M+  + + G +DKA     +++E G  PD V Y  L
Sbjct: 347 VETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 406

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ G + EA  + + M ++G  M+ +T NTILH LC  K L EA  L N  ++RG 
Sbjct: 407 IQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL 466

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  +   LI G+ +      A++L+ +MKE++I     TYN ++ G  + G  + A +
Sbjct: 467 FPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKE 526

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  +++   ++P   +F+ +++  CS+G + +A +  ++M+ KS KP ++ CN ++ G C
Sbjct: 527 IWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYC 586

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG--PD 429
           R G       F    I +G   D ++YNTLI    KE  +  AFGL+ +MEEK+ G  PD
Sbjct: 587 RSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPD 646

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
            +TY +I        +++EA+     M+E G                 ++P   +Y+  I
Sbjct: 647 VFTYNSILHGFCRENQMKEAEAVLRKMIERG-----------------VNPDRSTYTSLI 689

Query: 490 NEHCSQGRYKDALQIFEETRQKGIA 514
           N   SQ    +A +  +E  Q+G +
Sbjct: 690 NGFVSQDNLTEAFRFHDEMLQRGFS 714



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 235/458 (51%), Gaps = 2/458 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT++ A   +G + E  +L+  M  +G  P   TYN +++G CK G  + A
Sbjct: 255 GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERA 314

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V   M ++   PD  TY  L+   C  G   E   +  +M S  ++PD+V ++++++ 
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSL 374

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SG   +A    + + E G+ P+ V + I+I+ YC++G I +A  +   M + G + D
Sbjct: 375 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT++   CK   + EA ++ + M  +GL  ++ TL  ++   C    L  A  L  
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++   LD V+Y TL+ G+ +    + A ++W +M  ++I+P+  +++ ++  L   G
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A  + +E++   + P     N++I G+C  G       F  KM+ + F PD ++ N
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614

Query: 365 ILLSGLCREGILEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            L+ G  +E  + KA    +    K  G   D  TYN+++   C+E ++++A  +L +M 
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           E+ + PDR TY ++    V    L EA +F   M++ G
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG 712



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/545 (25%), Positives = 262/545 (48%), Gaps = 20/545 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  ++  ++ ++    +  KL E  +  + ++ +G   +    N L+    ++GW++ A 
Sbjct: 151 CGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAW 210

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R+   ++++    +V+T N+++N  C  G +E+      E++   + PD+VTYNTLI+ +
Sbjct: 211 RIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAY 270

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G   EAF+L+  +   G  P   T+N +I   CK GK ++A ++   M  +G SPD 
Sbjct: 271 SSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 330

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY +L+   CK G+  E   +   M  + +  + +  ++++        LD+A M  NS
Sbjct: 331 TTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 390

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G   D V Y  LI GY R    + A+ L +EM ++       TYN ++ GL +   
Sbjct: 391 VKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 450

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  + NE+ + G+ PD  T   +I G C  G ++ A++   KM EK  K D+VT N 
Sbjct: 451 LGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNT 510

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G  + G ++ A + +   + K      ++++ L+++LC +  L +AF +  EM  K 
Sbjct: 511 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKS 570

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----------KINHQVVQPNTSKT- 474
           + P      ++      SG   + + F   M+  G           I   V + N SK  
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAF 630

Query: 475 -----PEE----IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                 EE    + P   +Y+  ++  C + + K+A  +  +  ++G+  ++STY +L+N
Sbjct: 631 GLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLIN 690

Query: 526 GLIKR 530
           G + +
Sbjct: 691 GFVSQ 695



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 175/356 (49%), Gaps = 37/356 (10%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V +++++    + G L++     + +K+ GL+P+   Y IL+ GYC+ G + EAM 
Sbjct: 362 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMN 421

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M Q     DV TYN +++G C   ML EA +L  EM    L PD  T   LI+   
Sbjct: 422 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHC 481

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G    A +L  ++ E  IK + VT+N ++  + K G ID A +I  +M      P  +
Sbjct: 482 KLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 541

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +++ L++A C  G++ EAFR+ D M  K +K   +  N+++   C      +  + L   
Sbjct: 542 SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKM 601

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ--IMPSTFTYNAMIWGLSQSG 304
              G+  D +SY TLI G+ ++E  ++A  L  +M+E+Q  ++P  FTYN+++ G  +  
Sbjct: 602 ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661

Query: 305 KTEQAIDML-----------------------------------NELLQSGMIPDE 325
           + ++A  +L                                   +E+LQ G  PD+
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 37/288 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  D VTYNTIL  L K+  L E   L ++M ++GL P+  T  IL+ G+CKLG L+ A
Sbjct: 430 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNA 489

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +   M + +   DV TYN L++G+   G ++ A  +  +M S ++LP  ++++ L+N 
Sbjct: 490 MELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNA 549

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK------------------- 165
               G   EAF++ DE+    IKP  +  N MIK YC+ G                    
Sbjct: 550 LCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609

Query: 166 ----------------IDKACKIVRNMEE--NGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
                           + KA  +V+ MEE   G  PD  TYN+++   C+   M+EA  +
Sbjct: 610 CISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAV 669

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           +  M  +G+  +  T  ++++    +  L EA+   +   +RG+  D+
Sbjct: 670 LRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 180/398 (45%), Gaps = 37/398 (9%)

Query: 136 KLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           + +D+L  +    K  +++ + MI    + G++  A   V  M            N+L+ 
Sbjct: 87  RFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVS 146

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
                G+ +  F ++                  + T    +KL EAY        +GY +
Sbjct: 147 TYSNCGSNDSVFDLL------------------IRTFVQARKLREAYEAFTLLRSKGYTV 188

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
              +   LI    R      A +++ E+    +  + +T N M+  L + GK E+    L
Sbjct: 189 SIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFL 248

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           +E+ + G+ PD  T+NT+I  + S+G +E+A +  + M  K F P + T N +++GLC+ 
Sbjct: 249 SEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKH 308

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G  E+A + F   +  G + DS TY +L+   CK+    +   + S+M  + + PD   +
Sbjct: 309 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCF 368

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
           +++ +    SG L++A  + + + E G I                 P ++ Y+  I  +C
Sbjct: 369 SSMMSLFTRSGNLDKALMYFNSVKEAGLI-----------------PDNVIYTILIQGYC 411

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            +G   +A+ +  E  Q+G A++  TY  +++GL KR+
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 449


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 273/534 (51%), Gaps = 25/534 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+P+  TY +++  L K GKL++  +LL +M+ +G+ P    +N ++ G CK G   +A+
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDAL 85

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLINR 124
                +   K  PD+ T+N+L++    +G +EEAF++ + M  S + LP+VVTY T+IN 
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+   A +L+D ++E G  PN +T++++++  CK G+ DK   +++ M   GF PD
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YNTL++  CK+  ++EA  ++ +M R G     +T N+++   C  K++D A+ L+ 
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI------W 298
             S+RG   D ++Y T+I G  RD + + A  L  +M   + +P   TY+ +I      W
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            +    K E A ++L  + Q+G  P+  T+  +I G C   + ++AL    +M++    P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+ + ++++  LC+   L+ A K F     +    + V Y  LI  L K   ++ A  + 
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             M E    P   TY ++   L   GR+EEA +    M+                  +E 
Sbjct: 446 ELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIH-----------------KEC 487

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            P   SY   I   C     ++A ++F+    KG A+    Y  L+N L K+++
Sbjct: 488 FPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKR 541



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 228/424 (53%), Gaps = 7/424 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           CLP+ VTY T+++ L K GKL+   +LL  M + G  PN  TY++LV G CK G   +  
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  MT+    PDV  YN L+NG C +  L+EA  L + M      P VVTYN+L+  F
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELF 251

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             S +   AF+LI  + E G  P+ + +N +I   C++ ++D A  +++ M      PD 
Sbjct: 252 CRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDV 311

Query: 186 VTYNTLIDANCKAGN------MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           +TY+T+ID  CK         +E A  ++++M + G   N  T   ++  LC  +K  +A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL          D  S+  +I    +    + A K++  M ER+  P+   Y A+I G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS+ G+ ++A+ +  EL+     P   T+N+++ G C  G++E+A++    M+ K   PD
Sbjct: 432 LSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             +   L+ GLCR   +E+A + F++   KG A++   YN L++ LCK++RL DA G+ +
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550

Query: 420 EMEE 423
           ++ E
Sbjct: 551 KLIE 554



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 226/453 (49%), Gaps = 27/453 (5%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N  +N    AG   +A +L +E    + +P+  TY +LI+   ++G+  +A++L+DE+ +
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREE---RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            GI P    HN +IK  CK G+   A    + +     +PD +T+N L+DA  K+G +EE
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 204 AFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AF++ + M      + N +T  T+++ LC + KLD A  LL+  ++ G   + ++Y  L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G  +  + ++   L  EM  R   P    YN ++ GL +S + ++A++++  +++SG  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P   T+N+++  FC   QV++A +    M E+   PD++  N +++GLCR+  L+ A   
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERR------LEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +  +      D +TY+T+I  LCK+ R      LE A  +L  M++    P+  TYA +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L  + + ++A      M+++                 E+ P   S+S  I   C   
Sbjct: 359 IEGLCRARKSQQALALLRRMIDS-----------------EVVPDLSSFSMVIGSLCKSH 401

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               A +IF    ++    N   Y  L++GL K
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 201/381 (52%), Gaps = 7/381 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ +TY+ +++ L K G+ ++   LL +M ++G  P+   YN L++G CK   L EA
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V LM ++   P V TYN L+  +C +  ++ AFRL + M      PDV+ YNT+I  
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID------KACKIVRNMEE 178
                R  +A  L+ ++      P+ +T++ +I   CK+ ++D       AC+I+  M++
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQ 345

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY  +I+  C+A   ++A  ++  M    +  +  + + ++ +LC    LD 
Sbjct: 346 TGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDA 405

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           AY +    S+R    + V+Y  LI G  +  + ++A+++++ M E    P   TYN+++ 
Sbjct: 406 AYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLD 464

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL   G+ E+A+ M+  ++     PD  ++  +I G C    VE+A +    +  K F  
Sbjct: 465 GLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM 524

Query: 359 DIVTCNILLSGLCREGILEKA 379
           ++   N+L++ LC++  L  A
Sbjct: 525 EVGVYNVLVNELCKKKRLSDA 545



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 42/288 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK-----LG 59
           GC PD + YNT++  L +  +L++ + LL  M     VP+  TY+ ++ G CK       
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330

Query: 60  W-LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           W L+ A  ++++M Q    P+  TY ++I G C A   ++A  L + M   +++PD+ ++
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + +I    +S     A+K+   + E   KPN V +  +I    K G++DKA ++   M E
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK------------------------ 214
           + F P   TYN+++D  C  G +EEA RM++ M  K                        
Sbjct: 451 S-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEE 509

Query: 215 -----------GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
                      G  M     N +++ LC +K+L +A+ + N   + GY
Sbjct: 510 AYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 22/272 (8%)

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R  +  +A++L+   +E + +P+ FTY ++I GL ++GK +QA ++L+E+   G+ P   
Sbjct: 10  RAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
             N +I G C  G+   AL +   +      PDI+T NIL+  L + G +E+A + F S 
Sbjct: 67  VHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 387 ILKGKAV-DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
               + + + VTY T+I+ LCK+ +L+ A  LL  M E    P+  TY+ +   L ++GR
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
            ++       M   G                   P  I Y+  +N  C   R  +AL++ 
Sbjct: 187 TDKGFTLLQEMTRRG-----------------FQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +   + G      TY +LM  L  R K + +A
Sbjct: 230 QLMIRSGCYPTVVTYNSLME-LFCRSKQVDRA 260



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 114/218 (52%), Gaps = 3/218 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  +++ L +  K  +   LL  M    +VP+ +++++++   CK   
Sbjct: 343 MKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           L  A ++  +M++ +  P+   Y  LI+G    G +++A R+ + M ES +  P V TYN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR--PGVATYN 460

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++++     GR  EA ++++ +      P+  ++  +I+  C+   +++A ++ + +E  
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           GF+ +   YN L++  CK   + +A  + + +   G K
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/463 (33%), Positives = 245/463 (52%), Gaps = 1/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  PD  T+ TI+    + G L+    +   M + G      T N+L++G+CK G 
Sbjct: 229 MPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGR 288

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+  +         PD +TYN L+NG C  G  + A  +   M    L PD+ TYN+
Sbjct: 289 IDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNS 348

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   EA K++D++      PNAVT+N +I   CKE ++D+A +I R +   G
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+N+LI   C + N + A  + + M  KG + +  T N ++ +LC  +KL+EA 
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 468

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   + V Y TLI G+ ++++   A +++DEM+ + +   + TYN +I GL
Sbjct: 469 NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGL 528

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S + E A  ++++++  G+ PD+ T+N+++  FC  G ++KA      M      PDI
Sbjct: 529 CKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDI 588

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L+SGLC+ G ++ A +  RS  +KG  +    YN +I +L K  R  +A  L  E
Sbjct: 589 VTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFRE 648

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           M +K   PD  TY  ++  L    G + EA  FT  M+E G I
Sbjct: 649 MLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNI 691



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 271/563 (48%), Gaps = 53/563 (9%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P +  Y  IL  L K G    +R +L +MK  G   +R  + I V  Y K     E + 
Sbjct: 94  VPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVG 153

Query: 67  VVDLM------------------------------------TQNKSLPDVWTYNMLINGW 90
           +V +M                                     + +   DV T+N+LI   
Sbjct: 154 IVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKAL 213

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C A  +  A  + +EM S  L PD  T+ T++  + E G    A ++ +++ E+G     
Sbjct: 214 CKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTD 273

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           VT N++I  +CK+G+ID+A   ++     GF PD  TYNTL++  CK G+ + A  ++D 
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M   GL  +  T N+++  LC   +++EA  +L+    R    + V+Y  +I+   ++ +
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENR 393

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A ++   +  + I+P   T+N++I GL  S   + A+D+  E+   G  PDE T+N 
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I   CS  ++E+AL    +M       ++V  N L+ G C+   +E+A + F    L+G
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            + DSVTYNTLI  LCK +R+EDA  L+ +M  + L PD++TY ++ T   ++G +++A 
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                M  +G                  +P  ++Y+  I+  C  GR + A ++    + 
Sbjct: 574 DIVQTMTSSG-----------------CNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616

Query: 511 KGIAINKSTYMNLMNGLIKRRKS 533
           KG+ +    Y  ++  L KR ++
Sbjct: 617 KGMVLTPHAYNPVIQALFKRNRT 639



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/532 (29%), Positives = 264/532 (49%), Gaps = 17/532 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD   YN +L+ L    KL  V    S M ++ +  + +T+NIL+   CK   ++ A+ +
Sbjct: 166 PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILM 225

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M      PD  T+  ++ G+   G L+ A R++++M         VT N LIN F +
Sbjct: 226 MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCK 285

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A   I E    G +P+  T+N ++   CK G    A ++V  M   G  PD  T
Sbjct: 286 QGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYT 345

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI   CK G +EEA +++D M  +    N +T N I+ +LC E ++DEA  +    +
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D  ++ +LI G         A+ L++EMK +   P  FTYN +I  L  S K E
Sbjct: 406 SKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++L E+  +G   +   +NT+I GFC   ++E+A +  ++M  +    D VT N L+
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+   +E A +     I++G   D  TYN+L++  CK   ++ A  ++  M      
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN 585

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TYA + + L ++GR++ A +    ++ + ++   V+ P+             +Y+ 
Sbjct: 586 PDIVTYATLISGLCKAGRVQVASR----LLRSIQMKGMVLTPH-------------AYNP 628

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            I     + R  +A+++F E   K    +  TY  +  GL      I +AVD
Sbjct: 629 VIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVD 680



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 219/426 (51%), Gaps = 7/426 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN+++  L K G++ E   +L  M  +   PN  TYN ++S  CK   + EA
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +  L+T    LPDV T+N LI G C +   + A  L +EM+     PD  TYN LI+ 
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              S +  EA  L+ E++ +G   N V +N +I  +CK  +I++A +I   ME  G S D
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLID  CK+  +E+A ++MD M  +GL+ +  T N++L   C    + +A  ++ 
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQ 577

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + +  G   D V+Y TLI+G  +  +   A +L   ++ + ++ +   YN +I  L +  
Sbjct: 578 TMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRN 637

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTC 363
           +T +A+ +  E+L     PD  T+  +  G C+ G  + +A+ F  +M+E+   P+  + 
Sbjct: 638 RTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSF 697

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF----GLLS 419
            +L  GLC   + +  +K     + K K  +     + I    K R+ +DA     G+L 
Sbjct: 698 VMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREI--STIRGFLKIRKFQDALSTLGGILD 755

Query: 420 EMEEKK 425
           +M  ++
Sbjct: 756 DMYPRR 761



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 174/392 (44%), Gaps = 53/392 (13%)

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--------------------- 215
           ++  F P    Y  ++    KAG+ E   R+++ M   G                     
Sbjct: 89  KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148

Query: 216 ---------------LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
                          +K +T   N +L+ L    KL       +S  +R    D  ++  
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI    +  +   A+ + +EM    + P   T+  ++ G  + G  + A+ +  ++++ G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
               + T N +I+GFC +G++++AL F  + V + F+PD  T N L++GLC+ G  + A+
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +   + +L G   D  TYN+LIS LCK   +E+A  +L +M  +   P+  TY AI ++L
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            +  R++EA +   ++   G                 I P   +++  I   C    +K 
Sbjct: 389 CKENRVDEATEIARLLTSKG-----------------ILPDVCTFNSLIQGLCLSSNHKS 431

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A+ +FEE + KG   ++ TY  L++ L   RK
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 273/534 (51%), Gaps = 25/534 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+P+  TY +++  L K GKL++  +LL +M+ +G+ P    +N ++ G CK G   +A+
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDAL 85

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLINR 124
                +   K  PD+ T+N+L++    +G +EEAF++ + M  S + LP+VVTY T+IN 
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+   A +L+D ++E G  PN +T++++++  CK G+ DK   +++ M   GF PD
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YNTL++  CK+  ++EA  ++ +M R G     +T N+++   C  K++D A+ L+ 
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI------W 298
             S+RG   D ++Y T+I G  RD + + A  L  +M   + +P   TY+ +I      W
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            +    K E A ++L  + Q+G  P+  T+  +I G C   + ++AL    +M++    P
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+ + ++++  LC+   L+ A K F     +    + V Y  LI  L K   ++ A  + 
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             M E    P   TY ++   L   GR+EEA +    M+                  +E 
Sbjct: 446 ELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIH-----------------KEC 487

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            P   SY   I   C     ++A ++F+    KG A+    Y  L+N L K+++
Sbjct: 488 FPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKR 541



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 228/424 (53%), Gaps = 7/424 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           CLP+ VTY T+++ L K GKL+   +LL  M + G  PN  TY++LV G CK G   +  
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  MT+    PDV  YN L+NG C +  L+EA  L + M      P VVTYN+L+  F
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELF 251

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             S +   AF+LI  + E G  P+ + +N +I   C++ ++D A  +++ M      PD 
Sbjct: 252 CRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDV 311

Query: 186 VTYNTLIDANCKAGN------MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           +TY+T+ID  CK         +E A  ++++M + G   N  T   ++  LC  +K  +A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL          D  S+  +I    +    + A K++  M ER+  P+   Y A+I G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS+ G+ ++A+ +  EL+     P   T+N+++ G C  G++E+A++    M+ K   PD
Sbjct: 432 LSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             +   L+ GLCR   +E+A + F++   KG A++   YN L++ LCK++RL DA G+ +
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550

Query: 420 EMEE 423
           ++ E
Sbjct: 551 KLIE 554



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 226/453 (49%), Gaps = 27/453 (5%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N  +N    AG   +A +L +E    + +P+  TY +LI+   ++G+  +A++L+DE+ +
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREE---RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            GI P    HN +I+  CK G+   A    + +     +PD +T+N L+DA  K+G +EE
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 204 AFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AF++ + M      + N +T  T+++ LC + KLD A  LL+  ++ G   + ++Y  L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G  +  + ++   L  EM  R   P    YN ++ GL +S + ++A++++  +++SG  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P   T+N+++  FC   QV++A +    M E+   PD++  N +++GLCR+  L+ A   
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERR------LEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +  +      D +TY+T+I  LCK+ R      LE A  +L  M++    P+  TYA +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L  + + ++A      M+++                 E+ P   S+S  I   C   
Sbjct: 359 IEGLCRARKSQQALALLRRMIDS-----------------EVVPDLSSFSMVIGSLCKSH 401

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               A +IF    ++    N   Y  L++GL K
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 201/381 (52%), Gaps = 7/381 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ +TY+ +++ L K G+ ++   LL +M ++G  P+   YN L++G CK   L EA
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V LM ++   P V TYN L+  +C +  ++ AFRL + M      PDV+ YNT+I  
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID------KACKIVRNMEE 178
                R  +A  L+ ++      P+ +T++ +I   CK+ ++D       AC+I+  M++
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQ 345

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY  +I+  C+A   ++A  ++  M    +  +  + + ++ +LC    LD 
Sbjct: 346 TGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDA 405

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           AY +    S+R    + V+Y  LI G  +  + ++A+++++ M E    P   TYN+++ 
Sbjct: 406 AYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLD 464

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL   G+ E+A+ M+  ++     PD  ++  +I G C    VE+A +    +  K F  
Sbjct: 465 GLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM 524

Query: 359 DIVTCNILLSGLCREGILEKA 379
           ++   N+L++ LC++  L  A
Sbjct: 525 EVGVYNVLVNELCKKKRLSDA 545



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 42/288 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK-----LG 59
           GC PD + YNT++  L +  +L++ + LL  M     VP+  TY+ ++ G CK       
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330

Query: 60  W-LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           W L+ A  ++++M Q    P+  TY ++I G C A   ++A  L + M   +++PD+ ++
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + +I    +S     A+K+   + E   KPN V +  +I    K G++DKA ++   M E
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK------------------------ 214
           + F P   TYN+++D  C  G +EEA RM++ M  K                        
Sbjct: 451 S-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEE 509

Query: 215 -----------GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
                      G  M     N +++ LC +K+L +A+ + N   + GY
Sbjct: 510 AYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 22/272 (8%)

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R  +  +A++L+   +E + +P+ FTY ++I GL ++GK +QA ++L+E+   G+ P   
Sbjct: 10  RAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
             N +I G C  G+   AL +   +      PDI+T NIL+  L + G +E+A + F S 
Sbjct: 67  VHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 387 ILKGKAV-DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
               + + + VTY T+I+ LCK+ +L+ A  LL  M E    P+  TY+ +   L ++GR
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
            ++       M   G                   P  I Y+  +N  C   R  +AL++ 
Sbjct: 187 TDKGFTLLQEMTRRG-----------------FQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +   + G      TY +LM  L  R K + +A
Sbjct: 230 QLMIRSGCYPTVVTYNSLME-LFCRSKQVDRA 260



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 114/218 (52%), Gaps = 3/218 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  +++ L +  K  +   LL  M    +VP+ +++++++   CK   
Sbjct: 343 MKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           L  A ++  +M++ +  P+   Y  LI+G    G +++A R+ + M ES +  P V TYN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR--PGVATYN 460

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++++     GR  EA ++++ +      P+  ++  +I+  C+   +++A ++ + +E  
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           GF+ +   YN L++  CK   + +A  + + +   G K
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 260/467 (55%), Gaps = 13/467 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P++V Y T++ +L K  ++NE   LL +M   G VP+  T+N ++ G CK   
Sbjct: 237 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 296

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA----FRLRKEMESLKLLPDVV 116
           + EA ++V+ M      PD  TY  L+NG C  G ++ A    +R+ K        P  V
Sbjct: 297 INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK--------PTSV 348

Query: 117 TYNTLINRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            +NTLI+ F   GR  +A  ++ D +  +GI P+  T+N +I  Y K+G +  A +++R+
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M   G  P+  +Y  L+D  CK G ++EA+ +++ M   GLK NT+  N ++   C E +
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + EA  +     ++G   D  ++ +LI+G    ++   AL L  +M    ++ +T TYN 
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I    + G+ ++A  ++NE++  G + DE T+N++I G C  G+V+KA     KM+   
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P  ++CNIL++GLCR G++E+A++F +  +L+G   D VT+N+LI+ LC+  R+ED  
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            +  +++ + + PD  TY  + + L + G + +A       +E G +
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFV 695



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 257/510 (50%), Gaps = 31/510 (6%)

Query: 43  PNRTTYN----ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE 98
           P   +YN    ILVSG C     K A  V   M   K  P ++T+ +++   C    ++ 
Sbjct: 174 PTFKSYNVVLEILVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           A  + ++M     +P+ V Y TLI+   +  R  EA +L++E+   G  P+A T N +I 
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
             CK  +I++A K+V  M   GF+PD +TY  L++  CK G ++ A    D+  R   K 
Sbjct: 290 GLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA---KDLFYRIP-KP 345

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNS-ASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            ++  NT++H      +LD+A  +L+   +  G   D  +Y +LI GY++      AL++
Sbjct: 346 TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEV 405

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             +M+ +   P+ ++Y  ++ G  + GK ++A ++LNE+   G+ P+   FN +I  FC 
Sbjct: 406 LRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           E ++ +A++   +M  K  KPD+ T N L+SGLC    ++ AL   R  I +G   ++VT
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 525

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNTLI++  +   +++A  L++EM  +    D  TY ++   L  +G +++A+     M+
Sbjct: 526 YNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585

Query: 458 ETGKINHQV--------------VQPNTSKTPEEI----DPSSISYSEKINEHCSQGRYK 499
             G +   +              V+       E +     P  ++++  IN  C  GR +
Sbjct: 586 RDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 645

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           D L +F + + +GI  +  TY  LM+ L K
Sbjct: 646 DGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 189/348 (54%), Gaps = 1/348 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G +PD  TYN+++   +KKG +    ++L DM+ +G  PN  +Y ILV G+CKLG + E
Sbjct: 377 YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDE 436

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +++ M+ +   P+   +N LI+ +C    + EA  + +EM      PDV T+N+LI+
Sbjct: 437 AYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 496

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              E      A  L+ ++   G+  N VT+N +I  + + G+I +A K+V  M   G   
Sbjct: 497 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL 556

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TYN+LI   C+AG +++A  + + M R GL  ++I+ N +++ LC    ++EA    
Sbjct: 557 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                RG   D V++ +LI G  R  +    L ++ +++   I P T TYN ++  L + 
Sbjct: 617 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKG 676

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           G    A  +L+E ++ G +P++ T++ ++     +  +++   F+N +
Sbjct: 677 GFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRR-TFYNAV 723



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 160/300 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+  +Y  ++D   K GK++E  +LL++M   GL PN   +N L+S +CK   
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +   M +    PDV+T+N LI+G C    ++ A  L ++M S  ++ + VTYNT
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F   G   EA KL++E+   G   + +T+N +IK  C+ G++DKA  +   M  +G
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  ++ N LI+  C++G +EEA      M  +G   + +T N++++ LC   ++++  
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G   D V+Y TL++   +      A  L DE  E   +P+  T++ ++  L
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 168/531 (31%), Positives = 274/531 (51%), Gaps = 14/531 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P    YN +L AL     L   R  LS M + G+ PN  TYNILV   C  G L+EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLIN 123
           + VV  M      P+  TYN L+  +C AG L+ A R+   M E     P++VT+N+++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++GR   A K+ DE+   G+ P+ V++N ++  YCK G + ++  +   M + G  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VT+ +LI A CKAGN+E+A  ++  M  +GL+MN +T   ++   C +  LD+A + +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               K G     V Y  LI GY +  + + A +L  EM+ +++ P   TY+ +I G  + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  + A  +  ++L+ G++PD  T++++I G C E ++  A +    M++   +PD  T 
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ G C+EG +EKAL      I KG   D VTY+ LI+ L K  R ++A  LL ++  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 424 KKLGPDRYTYAAIHTALVESG-----RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +   PD   Y A+     ++       L +      +M E  K+   ++  N      ++
Sbjct: 532 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW-----KL 586

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           D S   YS  I+ HC  G  + AL   ++  + G + N ++ ++L+ GL +
Sbjct: 587 DGS--VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 635



 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/422 (33%), Positives = 246/422 (58%), Gaps = 15/422 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N++++ L K G++   R +  +M ++GL P+  +YN L+SGYCK+G L E++ V
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              MTQ   +PDV T+  LI+  C AG LE+A  L  +M    L  + VT+  LI+ F +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A   ++E+ + GI+P+ V +N +I  YCK G++D A +++R ME     PD VT
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+T+I   CK GN++ AF++   M +KG+  + IT ++++  LC EK+L++A  L  +  
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   DE +Y TLI G+ ++    +AL L DEM  + ++P   TY+ +I GLS+S +T+
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 308 QAIDMLNELLQSGMIPDETTFN---------------TIIHGFCSEGQVEKALQFHNKMV 352
           +A  +L +L     +PD   ++                ++ GFC +G +++A + +  M+
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++++K D    +IL+ G CR G + KAL F +  +  G + +S +  +L+  L +E  + 
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640

Query: 413 DA 414
           +A
Sbjct: 641 EA 642



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 229/422 (54%), Gaps = 19/422 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P V  YN ++    ++     A + +  +  HG+ PN  T+NI+++  C  G++++A  +
Sbjct: 116 PSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG-LKMNTITLNTILHTLC 231
           V +M   G +P+ VTYNTL+ A C+AG ++ A R++ +M  +G  K N +T N++++ LC
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              +++ A  + +   + G   D VSY TL++GY +    + +L ++ EM +R ++P   
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T+ ++I    ++G  EQA+ ++ ++ + G+  +E TF  +I GFC +G ++ AL    +M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            +   +P +V  N L++G C+ G ++ A +  R    K    D VTY+T+IS  CK   L
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           + AF L  +M +K + PD  TY+++   L E  RL +A +    M++ G           
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG----------- 463

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 + P   +Y+  I+ HC +G  + AL + +E  +KG+  +  TY  L+NGL K  
Sbjct: 464 ------VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 532 KS 533
           ++
Sbjct: 518 RT 519



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 20/358 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  V YN +++   K G+++  R+L+ +M+ + + P+  TY+ ++SGYCK+G 
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A ++   M +   LPD  TY+ LI G C    L +A  L + M  L + PD  TY T
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   +A  L DE+   G+ P+ VT++++I    K  +  +A +++  +    
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD + Y+ L+    KA      F+               ++  +L   C +  + EA 
Sbjct: 534 PVPDNIKYDALMLCCSKA-----EFK---------------SVVALLKGFCMKGLMKEAD 573

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S   R + LD   Y  LI G+ R     +AL    +M      P++ +  +++ GL
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            + G   +A + + +LL    + D      +I     EG V+  +     M      P
Sbjct: 634 FEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 168/531 (31%), Positives = 274/531 (51%), Gaps = 14/531 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P    YN +L AL     L   R  LS M + G+ PN  TYNILV   C  G L+EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLIN 123
           + VV  M      P+  TYN L+  +C AG L+ A R+   M E     P++VT+N+++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++GR   A K+ DE+   G+ P+ V++N ++  YCK G + ++  +   M + G  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VT+ +LI A CKAGN+E+A  ++  M  +GL+MN +T   ++   C +  LD+A + +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               K G     V Y  LI GY +  + + A +L  EM+ +++ P   TY+ +I G  + 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  + A  +  ++L+ G++PD  T++++I G C E ++  A +    M++   +PD  T 
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ G C+EG +EKAL      I KG   D VTY+ LI+ L K  R ++A  LL ++  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 424 KKLGPDRYTYAAIHTALVESG-----RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +   PD   Y A+     ++       L +      +M E  K+   ++  N      ++
Sbjct: 532 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW-----KL 586

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           D S   YS  I+ HC  G  + AL   ++  + G + N ++ ++L+ GL +
Sbjct: 587 DGS--VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 635



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/422 (33%), Positives = 246/422 (58%), Gaps = 15/422 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N++++ L K G++   R +  +M ++GL P+  +YN L+SGYCK+G L E++ V
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 280

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              MTQ   +PDV T+  LI+  C AG LE+A  L  +M    L  + VT+  LI+ F +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A   ++E+ + GI+P+ V +N +I  YCK G++D A +++R ME     PD VT
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+T+I   CK GN++ AF++   M +KG+  + IT ++++  LC EK+L++A  L  +  
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   DE +Y TLI G+ ++    +AL L DEM  + ++P   TY+ +I GLS+S +T+
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 308 QAIDMLNELLQSGMIPDETTFN---------------TIIHGFCSEGQVEKALQFHNKMV 352
           +A  +L +L     +PD   ++                ++ GFC +G +++A + +  M+
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++++K D    +IL+ G CR G + KAL F +  +  G + +S +  +L+  L +E  + 
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640

Query: 413 DA 414
           +A
Sbjct: 641 EA 642



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 229/422 (54%), Gaps = 19/422 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P V  YN ++    ++     A + +  +  HG+ PN  T+NI+++  C  G++++A  +
Sbjct: 116 PSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG-LKMNTITLNTILHTLC 231
           V +M   G +P+ VTYNTL+ A C+AG ++ A R++ +M  +G  K N +T N++++ LC
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              +++ A  + +   + G   D VSY TL++GY +    + +L ++ EM +R ++P   
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T+ ++I    ++G  EQA+ ++ ++ + G+  +E TF  +I GFC +G ++ AL    +M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            +   +P +V  N L++G C+ G ++ A +  R    K    D VTY+T+IS  CK   L
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           + AF L  +M +K + PD  TY+++   L E  RL +A +    M++ G           
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG----------- 463

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 + P   +Y+  I+ HC +G  + AL + +E  +KG+  +  TY  L+NGL K  
Sbjct: 464 ------VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 532 KS 533
           ++
Sbjct: 518 RT 519



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 155/332 (46%), Gaps = 20/332 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  V YN +++   K G+++  R+L+ +M+ + + P+  TY+ ++SGYCK+G 
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A ++   M +   LPD  TY+ LI G C    L +A  L + M  L + PD  TY T
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   +A  L DE+   G+ P+ VT++++I    K  +  +A +++  +    
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD + Y+ L+    KA      F+               ++  +L   C +  + EA 
Sbjct: 534 PVPDNIKYDALMLCCSKA-----EFK---------------SVVALLKGFCMKGLMKEAD 573

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S   R + LD   Y  LI G+ R     +AL    +M      P++ +  +++ GL
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            + G   +A + + +LL    + D      +I
Sbjct: 634 FEEGMVVEADNAIQDLLTCCPLADAEASKALI 665


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 263/471 (55%), Gaps = 14/471 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P++V Y T++ +L K  ++NE   LL +M   G VP+  T+N ++ G CK   
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA----FRLRKEMESLKLLPDVV 116
           + EA ++V+ M      PD  TY  L+NG C  G ++ A    +R+ K        P++V
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK--------PEIV 354

Query: 117 TYNTLINRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            +NTLI+ F   GR  +A  ++ D +  +GI P+  T+N +I  Y KEG +  A +++ +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M   G  P+  +Y  L+D  CK G ++EA+ +++ M   GLK NT+  N ++   C E +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + EA  +     ++G   D  ++ +LI+G    ++   AL L  +M    ++ +T TYN 
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I    + G+ ++A  ++NE++  G   DE T+N++I G C  G+V+KA     KM+   
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P  ++CNIL++GLCR G++E+A++F +  +L+G   D VT+N+LI+ LC+  R+ED  
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI-NHQ 465
            +  +++ + + PD  T+  + + L + G + +A       +E G + NH+
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 257/510 (50%), Gaps = 31/510 (6%)

Query: 43  PNRTTYN----ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE 98
           P   +YN    ILVSG C     K A  V   M   K  P ++T+ +++  +C    ++ 
Sbjct: 180 PTFKSYNVVLEILVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           A  L ++M     +P+ V Y TLI+   +  R  EA +L++E+   G  P+A T N +I 
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
             CK  +I++A K+V  M   GF+PD +TY  L++  CK G ++ A    D+  R   K 
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA---KDLFYRIP-KP 351

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNS-ASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
             +  NT++H      +LD+A  +L+   +  G   D  +Y +LI GY+++     AL++
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             +M+ +   P+ ++Y  ++ G  + GK ++A ++LNE+   G+ P+   FN +I  FC 
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           E ++ +A++   +M  K  KPD+ T N L+SGLC    ++ AL   R  I +G   ++VT
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNTLI++  +   +++A  L++EM  +    D  TY ++   L  +G +++A+     M+
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591

Query: 458 ETGK----------IN--------HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             G           IN         + V+           P  ++++  IN  C  GR +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           D L +F + + +GI  +  T+  LM+ L K
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 239/496 (48%), Gaps = 30/496 (6%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN---GWCNAGMLEEAFRLR 103
            Y +L+    KLG   E   +  L+ Q K    V+  ++ I+    +  AG   +  RL 
Sbjct: 113 VYQVLIG---KLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169

Query: 104 KEMESL-KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
            EM ++    P   +YN ++           A  +  ++    I P   T  +++K +C 
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
             +ID A  ++R+M ++G  P+ V Y TLI +  K   + EA ++++ M   G   +  T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            N ++  LC   +++EA  ++N    RG+  D+++YG L+ G  +  + + A  L+  + 
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQV 341
           +    P    +N +I G    G+ + A  +L++++ S G++PD  T+N++I+G+  EG V
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             AL+  + M  K  KP++ +  IL+ G C+ G +++A          G   ++V +N L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           IS+ CKE R+ +A  +  EM  K   PD YT+ ++ + L E   ++ A      M+  G 
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +                  ++++Y+  IN    +G  K+A ++  E   +G  +++ TY 
Sbjct: 526 V-----------------ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568

Query: 522 NLMNGLIKRRKSISKA 537
           +L+ GL  R   + KA
Sbjct: 569 SLIKGLC-RAGEVDKA 583



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 186/346 (53%), Gaps = 1/346 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G +PD  TYN+++   +K+G +    ++L DM+ +G  PN  +Y ILV G+CKLG + E
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  V++ M+ +   P+   +N LI+ +C    + EA  + +EM      PDV T+N+LI+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              E      A  L+ ++   G+  N VT+N +I  + + G+I +A K+V  M   G   
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TYN+LI   C+AG +++A  + + M R G   + I+ N +++ LC    ++EA    
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                RG   D V++ +LI G  R  +    L ++ +++   I P T T+N ++  L + 
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           G    A  +L+E ++ G +P+  T++ ++     +  +++  +F+N
Sbjct: 683 GFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRR-RFYN 727



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 160/297 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+  +Y  ++D   K GK++E  ++L++M   GL PN   +N L+S +CK   
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +   M +    PDV+T+N LI+G C    ++ A  L ++M S  ++ + VTYNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F   G   EA KL++E+   G   + +T+N +IK  C+ G++DKA  +   M  +G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  ++ N LI+  C++G +EEA      M  +G   + +T N++++ LC   ++++  
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            +       G   D V++ TL++   +      A  L DE  E   +P+  T++ ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 155/459 (33%), Positives = 247/459 (53%), Gaps = 15/459 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEV------RDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           C PD V+Y T+LD L K G++ E       R+L S        P+   YNI++ G C+  
Sbjct: 243 CAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQND 302

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            + EA+++ + M +    PD W+Y +LI+G   AG L +A  L +++    + P  V Y 
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +LI+    +    +A +L  +++  G  P+ VT+N+MI   CK G +++AC +++ M E+
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------- 231
           G  PD VTYNT++D  CK+  +EEA  + + M R G   N  + NTI+  LC        
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 232 CEK-KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C++ KLDEA+ LL   +  G+  D V+Y TLI+G     + + A  L ++M +RQ  P+ 
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            T N +I GL ++G+ ++A ++L+ ++ SG  PD  T+NT++HG C  GQ E+A +  + 
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           MV +   P++VT   L+SGLC+   L +A   F      G A +  TY  LI   C   +
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 662

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           ++    L  EM    + PD   Y  +   L +SGR   A
Sbjct: 663 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 701



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 237/454 (52%), Gaps = 11/454 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+ +Y  ++D L K GKLN+ R+L   +   G+ P+   Y  L+ G C      +A  +
Sbjct: 321 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 380

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +    P   TYN++I+  C  GMLEEA  L K+M     +PDVVTYNT+++   +
Sbjct: 381 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 440

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC---------KIVRNMEE 178
           S R  EA  L +E++  G  PN  +HN +I   C++ KID+AC         ++++ M +
Sbjct: 441 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD 500

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G  PD VTY+TLI   C    +++A  +++ M ++  K   +T NT++H LC   ++ E
Sbjct: 501 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 560

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +L++    G   D V+Y TL+ G+ R  +  RA +L  +M  R + P+  TY A++ 
Sbjct: 561 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 620

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++ +  +A  +  ++  SG  P+  T+  +I GFCS GQV+  L+   +MV     P
Sbjct: 621 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSW--ILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           D V    L + LC+ G   +AL+  R     L+ +A     Y   +  L +  ++E A G
Sbjct: 681 DHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALG 740

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            + +M      P     A++   L +SG+  EA+
Sbjct: 741 FVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 774



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 282/578 (48%), Gaps = 80/578 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD+ T+ TIL  L K GK++E   ++ +M+ + + P   T + L    C  G ++ A
Sbjct: 74  GCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERA 133

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++++M    S      YN+++   C A  +++A  L + M   ++     + ++++  
Sbjct: 134 FQLLEIMPVANS----SAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVG 189

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SGR  EA ++     E+  +P  VT N++++ +C  G++DKA +++R M +   +PD
Sbjct: 190 LMDSGRIDEALQV---YRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPD 246

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL---------NTILHTLCCEKK 235
            V+Y T++D  CKAG +EEA R+    G + L  ++ +          N ++  LC   +
Sbjct: 247 EVSYCTVLDGLCKAGRVEEAVRL---FGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +DEA  +    ++R    D  SYG LI G  +  K N A  L+ ++    + PST  Y +
Sbjct: 304 IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363

Query: 296 MIWGLSQS-----------------------------------GKTEQAIDMLNELLQSG 320
           +I GL  +                                   G  E+A D++ ++++ G
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE------- 373
            +PD  T+NT++ G C   +VE+AL   N+M      P+  + N ++ GLC++       
Sbjct: 424 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 483

Query: 374 --GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G L++A +  +     G   D VTY+TLIS LC   R++DA  LL +M +++  P   
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           T   +   L ++GR++EA++    MV +G+                  P  ++Y+  ++ 
Sbjct: 544 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQ-----------------SPDVVTYNTLVHG 586

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           HC  G+ + A ++  +   +G+A N  TY  L++GL K
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 624



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 268/537 (49%), Gaps = 35/537 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           + +++L  L   G+++E   +  + +++   P   T N+L+ G+C  G + +A  ++  M
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME------SLKLLPDVVTYNTLINRF 125
              +  PD  +Y  +++G C AG +EEA RL  + E      S    P +  YN +I   
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++ R  EA ++ ++++E  + P++ ++ I+I    K GK++ A  + + +  +G +P  
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPST 358

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y +LI   C A + ++A  +   M R+G   + +T N ++   C    L+EA  L+  
Sbjct: 359 VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 418

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS-- 303
             + G+  D V+Y T++ G  +  +   AL L++EM+     P+  ++N +I GL Q   
Sbjct: 419 MIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 478

Query: 304 -------GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
                  GK ++A  +L  +   G +PD  T++T+I G CS  +V+ A      MV++  
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           KP +VT N L+ GLC+ G +++A +   + +  G++ D VTYNTL+   C+  + E A  
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LLS+M  + L P+  TY A+ + L ++ RL EA    + M  +G                
Sbjct: 599 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG---------------- 642

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
              P+  +Y+  I   CS G+    L++F E    GI+ +   Y  L   L K  +S
Sbjct: 643 -CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 698



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 222/436 (50%), Gaps = 15/436 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  V Y +++  L      ++ R+L +DM ++G  P+  TYN+++   CK G L+EA
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL--- 121
             ++  M ++  +PDV TYN +++G C +  +EEA  L  EME L   P+  ++NT+   
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472

Query: 122 ------INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
                 I++  + G+  EAF+L+  + + G  P+ VT++ +I   C   ++D A  ++ +
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 532

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M +    P  VT NTLI   CKAG ++EA  ++D M   G   + +T NT++H  C   +
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 592

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
            + A  LL+    RG   + V+Y  L++G  +  +   A  ++ +MK     P+ FTY A
Sbjct: 593 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 652

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF----HNKM 351
           +I G   +G+ +  + +  E++ +G+ PD   + T+    C  G+  +AL+        +
Sbjct: 653 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 712

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
             +++  ++      + GL   G +E AL F R  +  G+        +L++ LCK  + 
Sbjct: 713 RSEAWGDEVY--RFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 770

Query: 412 EDAFGLLSEMEEKKLG 427
            +A  +L E+ +   G
Sbjct: 771 GEARAVLEEIMDLAYG 786



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/574 (24%), Positives = 250/574 (43%), Gaps = 73/574 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  + + +++      G+  E   + S M+ +   P    YN+L+    K    +  
Sbjct: 5   GIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLME-ECHSPYPDVYNVLIDSLSKRQETEAV 63

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++V +M      PD +T+  ++ G C AG ++EA  +  EM S  + P   T + L + 
Sbjct: 64  KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123

Query: 125 FFESGRSMEAFKLIDELDEHGIKP--NAVTHNIMIKWYCKEGKIDKACKIVRNM------ 176
               G    AF+L++      I P  N+  +NI++   CK  ++D A ++ R M      
Sbjct: 124 LCLRGSMERAFQLLE------IMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177

Query: 177 --------------------------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
                                      EN   P  VT N L++  C  G +++A  ++  
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV------SYGTLITG 264
           M  +    + ++  T+L  LC   +++EA  L                     Y  +I G
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             ++++ + A++++++M ER + P +++Y  +I GL+++GK   A ++  +LL SG+ P 
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              + ++IHG C     + A +    M  +   P  VT N+++   C+ G+LE+A    +
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES- 443
             I  G   D VTYNT++  LCK  R+E+A  L +EME     P+R ++  I   L +  
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 477

Query: 444 --------GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
                   G+L+EA +    M + G +                 P  ++YS  I+  CS 
Sbjct: 478 KIDQACQRGKLDEAFRLLKRMTDDGHV-----------------PDVVTYSTLISGLCSI 520

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            R  DA  + E+  ++       T   L++GL K
Sbjct: 521 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 554



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 46/351 (13%)

Query: 1   MEGFGCLPDNVTYNTI---------LDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNIL 51
           ME  GC P+  ++NTI         +D   ++GKL+E   LL  M   G VP+  TY+ L
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513

Query: 52  VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
           +SG C +  + +A  +++ M + +  P V T N LI+G C AG ++EA  +   M S   
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
            PDVVTYNTL++    +G++  A +L+ ++   G+ PN VT+  ++   CK  ++ +AC 
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           +   M+ +G +P+  TY  LI   C AG ++   ++   M   G+               
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP------------- 680

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE--RQIMPS 289
                                 D V YGTL     +  ++ RAL++  E +E  R     
Sbjct: 681 ----------------------DHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 718

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
              Y   + GL ++GK E A+  + ++++ G +P      +++ G C  GQ
Sbjct: 719 DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 769



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 20/273 (7%)

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G +   + + ++I G+    +   A+K++  M+E    P    YN +I  LS+  +TE
Sbjct: 3   QQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETE 61

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               M+  ++  G  PD  TF TI+ G C  G++++A    ++M  +   P   T + L 
Sbjct: 62  AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC  G +E+A +            +S  YN ++ +LCK  R++DA  L   M EK++ 
Sbjct: 122 HELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177

Query: 428 PDRYTYAAIHTALVESGRLEEAQKF------------TSIMVETGKINHQVVQPN---TS 472
               +  ++   L++SGR++EA +              ++++E      QV +      +
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
              EE  P  +SY   ++  C  GR ++A+++F
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLF 270


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 146/426 (34%), Positives = 241/426 (56%), Gaps = 3/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG G +PD +TYN ++    K G++N   + LS + +  + P+  TYN ++   C  G 
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEIN---NALSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+AM V+D M Q    PDV TY +LI   C    +  A +L  EM      PDVVTYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   + GR  EA K ++++   G +PN +THNI+++  C  G+   A K++ +M   G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSP  VT+N LI+  C+ G +  A  +++ M + G + N+++ N +LH  C EKK+D A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG Y D V+Y T++T   +D K   A+++ +++  +   P   TYN +I GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +++GKT +AI +L+E+    + PD  T+++++ G   EG+V++A++F ++      +P+ 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N ++ GLC+    ++A+ F    I +G   +  +Y  LI  L  E   ++A  LL+E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579

Query: 421 MEEKKL 426
           +  K L
Sbjct: 580 LCNKGL 585



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 246/445 (55%), Gaps = 3/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   T++    + GK  +   +L  ++  G VP+  TYN+++SGYCK G +  A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+D M+ +   PDV TYN ++   C++G L++A  +   M      PDV+TY  LI  
Sbjct: 192 LSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                    A KL+DE+ + G  P+ VT+N+++   CKEG++D+A K + +M  +G  P+
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N ++ + C  G   +A +++  M RKG   + +T N +++ LC +  L  A  +L 
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + +SY  L+ G+ +++K +RA++  + M  R   P   TYN M+  L + G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A+++LN+L   G  P   T+NT+I G    G+  KA++  ++M  K  KPD +T +
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GL REG +++A+KFF  +   G   ++VT+N+++  LCK R+ + A   L  M  +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
              P+  +Y  +   L   G  +EA
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEA 573



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 268/505 (53%), Gaps = 20/505 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           ++V  N  L  + + G+L E    L +M   G VP+      L+ G+C+LG  ++A +++
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           +++  + ++PDV TYN++I+G+C AG +  A  +   ++ + + PDVVTYNT++    +S
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDS 217

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  +A +++D + +    P+ +T+ I+I+  C++  +  A K++  M + G +PD VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L++  CK G ++EA + ++ M   G + N IT N IL ++C   +  +A  LL    +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G+    V++  LI    R     RA+ + ++M +    P++ +YN ++ G  +  K ++
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AI+ L  ++  G  PD  T+NT++   C +G+VE A++  N++  K   P ++T N ++ 
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL + G   KA+K       K    D++TY++L+  L +E ++++A     E E   + P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  T+ +I   L +S + + A  F   M+  G                   P+  SY+  
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG-----------------CKPNETSYTIL 560

Query: 489 INEHCSQGRYKDALQIFEETRQKGI 513
           I     +G  K+AL++  E   KG+
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 22/442 (4%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           V  N  + +   +G   E FK ++ +  HG  P+ +    +I+ +C+ GK  KA KI+  
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           +E +G  PD +TYN +I   CKAG +  A  ++D   R  +  + +T NTIL +LC   K
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGK 219

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           L +A  +L+   +R  Y D ++Y  LI    RD     A+KL DEM++R   P   TYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++ G+ + G+ ++AI  LN++  SG  P+  T N I+   CS G+   A +    M+ K 
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           F P +VT NIL++ LCR+G+L +A+         G   +S++YN L+   CKE++++ A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNT 471
             L  M  +   PD  TY  + TAL + G++E+A +  + +   G     I +  V    
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 472 SKT--------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           +K                +++ P +I+YS  +     +G+  +A++ F E  + GI  N 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 518 STYMNLMNGLIKRRKSISKAVD 539
            T+ ++M GL K R++  +A+D
Sbjct: 520 VTFNSIMLGLCKSRQT-DRAID 540



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 180/323 (55%), Gaps = 2/323 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG- 59
           M   GC PD VTYN +++ + K+G+L+E    L+DM   G  PN  T+NI++   C  G 
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           W+     + D++ +  S P V T+N+LIN  C  G+L  A  + ++M      P+ ++YN
Sbjct: 325 WMDAEKLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            L++ F +  +   A + ++ +   G  P+ VT+N M+   CK+GK++ A +I+  +   
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G SP  +TYNT+ID   KAG   +A +++D M  K LK +TIT ++++  L  E K+DEA
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               +   + G   + V++ +++ G  +  + +RA+     M  R   P+  +Y  +I G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563

Query: 300 LSQSGKTEQAIDMLNELLQSGMI 322
           L+  G  ++A+++LNEL   G++
Sbjct: 564 LAYEGMAKEALELLNELCNKGLM 586



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 33/377 (8%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+ + V  N  +    + G +EE F+ ++ M   G   + I   T++   C   K  +A 
Sbjct: 98  FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L      G   D ++Y  +I+GY +  + N AL + D M    + P   TYN ++  L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSL 214

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SGK +QA+++L+ +LQ    PD  T+  +I   C +  V  A++  ++M ++   PD+
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L++G+C+EG L++A+KF       G   + +T+N ++ S+C   R  DA  LL++
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-SKTP---- 475
           M  K   P   T+  +   L   G L  A      M + G       QPN+ S  P    
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNSLSYNPLLHG 388

Query: 476 ----EEID---------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
               +++D               P  ++Y+  +   C  G+ +DA++I  +   KG +  
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448

Query: 517 KSTYMNLMNGLIKRRKS 533
             TY  +++GL K  K+
Sbjct: 449 LITYNTVIDGLAKAGKT 465


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 172/561 (30%), Positives = 280/561 (49%), Gaps = 25/561 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+V Y  +++   K+  +     +  +M  + +  N  TY  L+ G CK+G 
Sbjct: 328 MYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGD 387

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A  +   MT     PD+ TYN LI G+     +E+A+ L  E++   L  +      
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N     G    A +L  E+   G+KPN V +  ++K   KEG+ ++A KI+  M++ G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD   YNT+I   CKAG MEE    +  M  KGLK N  T    +H  C   ++  A 
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G   ++V    LI GY +D    +A   +  M ++ ++P   T++ +I GL
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++GK ++A+ + +ELL  G++PD  T+ ++I   C EG ++ A + H+ M +K   P+I
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L++GLC+ G + KA + F     KG A +SVTY+T+I+  CK   L +AF L   
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN----------------- 463
           M+   + PD + Y A+     ++G  E+A      MVE G  +                 
Sbjct: 748 MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKL 807

Query: 464 ---HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
              +Q+V+         I P+ ++Y+  I  HC+ G  K+A Q+F E +++ +  N  TY
Sbjct: 808 IEAYQLVE---DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTY 864

Query: 521 MNLMNGL--IKRRKSISKAVD 539
            +L++G   I RR  +    D
Sbjct: 865 TSLLHGYNRIGRRSEMFSLFD 885



 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 268/523 (51%), Gaps = 17/523 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  TY  +++A  + GK+ E + +L DM+++G +PN  TY+++++G C+ G + EA+ 
Sbjct: 229 VPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE 288

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M     LPD + Y  LI+G+C      E   +  EM ++ L PD V Y  LIN F 
Sbjct: 289 LKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFV 348

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +      AF++ +E+    IK N  T+  +I   CK G ++KA  +   M   G  PD  
Sbjct: 349 KQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN LI+   K  NME+A+ ++  + ++ L  N      I++ LC    L  A  L    
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + V Y T++ G  ++ +   A+K+   MK++ + P  F YN +I G  ++GK 
Sbjct: 469 ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM 528

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+    L E++  G+ P+  T+   IHG+C  G+++ A +   +M++    P+ V C  L
Sbjct: 529 EEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDL 588

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C++G   KA   FR  + +G   D  T++ LI  L K  +L++A G+ SE+ +K L
Sbjct: 589 IDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGL 648

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD +TY ++ + L + G L+ A +    M + G                 I+P+ ++Y+
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG-----------------INPNIVTYN 691

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             IN  C  G    A ++F+   +KG+A N  TY  ++ G  K
Sbjct: 692 ALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCK 734



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 255/519 (49%), Gaps = 18/519 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  P+ V Y TI+  L K+G+  E   +L  MK QGL P+   YN ++ G+CK G 
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++E    +  M      P+V+TY   I+G+C AG ++ A R   EM    + P+ V    
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G + +AF     + + G+ P+  TH+++I    K GK+ +A  +   + + G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY +LI   CK G+++ AF + D M +KG+  N +T N +++ LC   ++ +A 
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   ++G   + V+Y T+I GY +      A +L+  MK   + P +F Y A+I G 
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G TE+A+ +   +++ G I     FN +I GF   G++ +A Q    MV+    P+ 
Sbjct: 768 CKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH 826

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  IL+   C  G +++A + F     +    + +TY +L+    +  R  + F L  E
Sbjct: 827 VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + + PD   ++ +  A ++ G   +A K    M+  G                 ++ 
Sbjct: 887 MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEG-----------------VNV 929

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
               Y+  I+  C      + L++ +E  ++G  ++ +T
Sbjct: 930 CKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLAT 968



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 233/494 (47%), Gaps = 36/494 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD   YNT++    K GK+ E +  L +M  +GL PN  TY   + GYC+ G 
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562

Query: 61  LKEAMR----------------VVDL-------------------MTQNKSLPDVWTYNM 85
           ++ A R                  DL                   M     LPDV T+++
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI+G    G L+EA  +  E+    L+PDV TY +LI+   + G    AF+L D++ + G
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I PN VT+N +I   CK G+I KA ++   + E G + + VTY+T+I   CK+ N+ EAF
Sbjct: 683 INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAF 742

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++   M   G+  ++     ++   C     ++A  L     + G      ++  LI G+
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGF 801

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
           F+  K   A +L ++M +  I P+  TY  +I      G  ++A  +  E+ +  ++P+ 
Sbjct: 802 FKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNV 861

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+ +++HG+   G+  +     ++MV +  KPD +  ++++    +EG   KALK    
Sbjct: 862 LTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDD 921

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + +G  V    Y  LI +LCK   L +   +L E+E++       T   +      +GR
Sbjct: 922 MLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGR 981

Query: 446 LEEAQKFTSIMVET 459
            +EA +    MV +
Sbjct: 982 TDEALRVLESMVRS 995



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 218/517 (42%), Gaps = 100/517 (19%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+++L    CN+G+   A  + + M   +  P V   +++I             K   E+
Sbjct: 109 TFSILSLILCNSGLFGNAANVLERMIDTRN-PHVKILDSII-------------KCYKEI 154

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF-------------------- 181
           +      + V   I+I  Y K+G +++A  +    + N F                    
Sbjct: 155 NGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRV 214

Query: 182 --------------SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
                          PD  TY  LI+A C+ G +EE   ++  M  KG   N +T + ++
Sbjct: 215 ELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVI 274

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM------ 281
             LC    +DEA  L  S + +G   D   Y TLI G+ R +++     + DEM      
Sbjct: 275 AGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLK 334

Query: 282 -------------------------KE----RQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
                                    KE    R+I  +TFTY A+I GL + G  E+A D+
Sbjct: 335 PDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDL 394

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            +E+   G+ PD  T+N +I G+     +EKA +   ++ +++   +   C  +++GLC 
Sbjct: 395 FSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCH 454

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G L +A + F+  I  G   + V Y T++  L KE R E+A  +L  M+++ L PD + 
Sbjct: 455 CGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFC 514

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +     ++G++EE + +   M+  G                 + P+  +Y   I+ +
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKG-----------------LKPNVYTYGAFIHGY 557

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           C  G  + A + F E    GIA N     +L++G  K
Sbjct: 558 CRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 3/217 (1%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG    P    +N ++D  FK GKL E   L+ DM    + PN  TY IL+  +C +G +
Sbjct: 786 EGIASTP---AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           KEA ++   M +   +P+V TY  L++G+   G   E F L  EM +  + PD + ++ +
Sbjct: 843 KEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVM 902

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++   + G  ++A KL+D++   G+      + I+I   CK   + +  K++  +E+ G 
Sbjct: 903 VDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGS 962

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
                T  TL+    +AG  +EA R+++ M R  L +
Sbjct: 963 KLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLNL 999



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 18/203 (8%)

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           F  +I  +  +G + +A+          F   +  CN L   L +   +E   K ++  +
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKG-M 224

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           L     D  TY  LI++ C+  ++E+   +L +MEEK   P+  TY+ +   L  +G ++
Sbjct: 225 LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA +    M   G +                 P +  Y+  I+  C Q R  +   + +E
Sbjct: 285 EALELKRSMANKGLL-----------------PDNYIYATLIDGFCRQKRSTEGKSMLDE 327

Query: 508 TRQKGIAINKSTYMNLMNGLIKR 530
               G+  +   Y  L+NG +K+
Sbjct: 328 MYTMGLKPDHVAYTALINGFVKQ 350



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 24/172 (13%)

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+    ++G L +A+  F         V     N+L   L K  R+E    L  ++ + 
Sbjct: 168 ILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVE----LFWKVYKG 223

Query: 425 KLG---PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            LG   PD YTY  +  A    G++EE +     M E G I                 P+
Sbjct: 224 MLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCI-----------------PN 266

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            ++YS  I   C  G   +AL++      KG+  +   Y  L++G  ++++S
Sbjct: 267 LVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRS 318


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 246/445 (55%), Gaps = 3/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   T++    + GK  +   +L  ++  G VP+  TYN+++SGYCK G +  A
Sbjct: 132 GNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+D M+ +   PDV TYN ++   C++G L++A  +   M      PDV+TY  LI  
Sbjct: 192 LSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                   +A KL+DE+ + G  P+ VT+N+++   CKEG++D+A K + +M  +G  P+
Sbjct: 249 TCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N ++ + C  G   +A +++  M RKG   + +T N +++ LC +  L  A  +L 
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   + +SY  L+ G+ +++K +RA++  + M  R   P   TYN M+  L + G
Sbjct: 369 KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A+++LN+L   G  P   T+NT+I G    G+  KA++  ++M  K  KPD +T +
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GL REG +++A+KFF  +   G   ++VT+N+++  LCK R+ + A   L  M  +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
              P   +Y  +   L   G  +EA
Sbjct: 549 GCKPTETSYTILIEGLAYEGMAKEA 573



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/426 (34%), Positives = 241/426 (56%), Gaps = 3/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG G +PD +TYN ++    K G++N   + LS + +  + P+  TYN ++   C  G 
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEIN---NALSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+AM V+D M Q    PDV TY +LI   C    + +A +L  EM      PDVVTYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   + GR  EA K ++++   G +PN +THNI+++  C  G+   A K++ +M   G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSP  VT+N LI+  C+ G +  A  +++ M + G + N+++ N +LH  C EKK+D A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG Y D V+Y T++T   +D K   A+++ +++  +   P   TYN +I GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +++GKT +AI +L+E+    + PD  T+++++ G   EG+V++A++F ++      +P+ 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N ++ GLC+    ++A+ F    I +G      +Y  LI  L  E   ++A  LL+E
Sbjct: 520 VTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNE 579

Query: 421 MEEKKL 426
           +  K L
Sbjct: 580 LCNKGL 585



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 269/505 (53%), Gaps = 20/505 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           ++V  N  L  L + G+L E    L +M   G VP+      L+ G+C++G  ++A +++
Sbjct: 101 EDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKIL 160

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           +++  + ++PDV TYN++I+G+C AG +  A  +   ++ + + PDVVTYNT++    +S
Sbjct: 161 EVLEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDS 217

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  +A +++D + +    P+ +T+ I+I+  C++  + +A K++  M + G +PD VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTY 277

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L++  CK G ++EA + ++ M   G + N IT N IL ++C   +  +A  LL    +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G+    V++  LI    R     RA+ + ++M +    P++ +YN ++ G  +  K ++
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDR 397

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AI+ L  ++  G  PD  T+NT++   C +G+VE A++  N++  K   P ++T N ++ 
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL + G   KA+K       K    D++TY++L+  L +E ++++A     E E   + P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRP 517

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  T+ +I   L ++ + + A  F   M+  G                   P+  SY+  
Sbjct: 518 NAVTFNSIMLGLCKTRQTDRAIDFLVYMINRG-----------------CKPTETSYTIL 560

Query: 489 INEHCSQGRYKDALQIFEETRQKGI 513
           I     +G  K+AL++  E   KG+
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 234/447 (52%), Gaps = 23/447 (5%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           +L DV + N L  +   +G   E FK ++ +  HG  P+ +    +I+ +C+ GK  KA 
Sbjct: 99  VLEDVESNNHL-RQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAA 157

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           KI+  +E +G  PD +TYN +I   CKAG +  A  ++D   R  +  + +T NTIL +L
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSL 214

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   KL +A  +L+   +R  Y D ++Y  LI    RD    +A+KL DEM++R   P  
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDV 274

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TYN ++ G+ + G+ ++AI  LN++  SG  P+  T N I+   CS G+   A +    
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M+ K F P +VT NIL++ LCR+G+L +A+         G   +S++YN L+   CKE++
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQV 466
           ++ A   L  M  +   PD  TY  + TAL + G++E+A +  + +   G     I +  
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454

Query: 467 VQPNTSKT--------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
           V    +K                +++ P +I+YS  +     +G+  +A++ F E  + G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514

Query: 513 IAINKSTYMNLMNGLIKRRKSISKAVD 539
           +  N  T+ ++M GL K R++  +A+D
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQT-DRAID 540



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 180/323 (55%), Gaps = 2/323 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG- 59
           M   GC PD VTYN +++ + K+G+L+E    L+DM   G  PN  T+NI++   C  G 
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           W+     + D++ +  S P V T+N+LIN  C  G+L  A  + ++M      P+ ++YN
Sbjct: 325 WMDAEKLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYN 383

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            L++ F +  +   A + ++ +   G  P+ VT+N M+   CK+GK++ A +I+  +   
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G SP  +TYNT+ID   KAG   +A +++D M  K LK +TIT ++++  L  E K+DEA
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               +   + G   + V++ +++ G  +  + +RA+     M  R   P+  +Y  +I G
Sbjct: 504 IKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG 563

Query: 300 LSQSGKTEQAIDMLNELLQSGMI 322
           L+  G  ++A+++LNEL   G++
Sbjct: 564 LAYEGMAKEALELLNELCNKGLM 586



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 21/306 (6%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S++   + L++V     +    R  +     K  + M     +P       +I G  + G
Sbjct: 92  SSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMG 151

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT +A  +L  L  SG +PD  T+N +I G+C  G++  AL   ++M   S  PD+VT N
Sbjct: 152 KTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYN 208

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +L  LC  G L++A++     + +    D +TY  LI + C++  +  A  LL EM ++
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDR 268

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPEEID- 479
              PD  TY  +   + + GRL+EA KF + M  +G     I H ++  +   T   +D 
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328

Query: 480 -------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                        PS ++++  IN  C +G    A+ I E+  + G   N  +Y  L++G
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHG 388

Query: 527 LIKRRK 532
             K +K
Sbjct: 389 FCKEKK 394


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 264/525 (50%), Gaps = 37/525 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN I+  +  +G L +    +  M+K+G+ PN  TYN L+   CK   +KEA
Sbjct: 202 GVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEA 261

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M       ++ +YN +ING C  G + E   L +EM    L+PD VTYNTL+N 
Sbjct: 262 MALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNG 321

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G   +   L+ E+   G+ PN VT+  +I   CK G + +A +I   M   G  P+
Sbjct: 322 FCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPN 381

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TLID  C+ G M EA++++  M   G   + +T N ++H  C   ++ EA  +L 
Sbjct: 382 ERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILR 441

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG   D VSY T+I G+ R+ +  +A ++ +EM E+ ++P T TY+++I GL    
Sbjct: 442 GMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQ 501

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K  +A D+  E+++ G+ PDE T+ ++I+ +C +G++ KAL+ H++MV++ F PD VT +
Sbjct: 502 KLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYS 561

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++GL ++   + A +       +    D VTYNTLI + C     +   GL+     K
Sbjct: 562 VLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNNEFKSVEGLVKGFCMK 620

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
                              G + EA +    M++    NH+              P++  
Sbjct: 621 -------------------GLMNEADRVFKTMLQR---NHK--------------PNAAI 644

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I+ H   G    A  ++ E      A +    + L+  L +
Sbjct: 645 YNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAR 689



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 255/509 (50%), Gaps = 23/509 (4%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW-----LKEA 64
           +  ++ ++ +L + G + +   LL    + G  P   +YN ++    +          +A
Sbjct: 132 SAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDA 191

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV   M +N   P+V+TYN++I G  + G LE+     ++ME   + P+VVTYNTLI+ 
Sbjct: 192 ERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDA 251

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  +  EA  L+  +   G+  N +++N +I   C +G++ +  ++V  M   G  PD
Sbjct: 252 SCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTL++  CK GN+ +   ++  M  KGL  N +T  T+++ +C    L  A  + +
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG   +E +Y TLI G+ +    N A K+  EM      PS  TYNA++ G    G
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A+ +L  +++ G+ PD  +++T+I GFC E ++ KA Q   +MVEK   PD VT +
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GLC +  L +A   FR  + +G   D VTY +LI++ C +  L  A  L  EM ++
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              PD  TY+ +   L +  R + A++    +                   EE  P  ++
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY-----------------EESVPDDVT 594

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGI 513
           Y+  I E+CS   +K    + +    KG+
Sbjct: 595 YNTLI-ENCSNNEFKSVEGLVKGFCMKGL 622



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 241/457 (52%), Gaps = 22/457 (4%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM-----EAFK 136
            +++++      G + +A  L          P V++YN +++       S      +A +
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           +  ++  +G+ PN  T+N++I+    +G ++K    +R ME+ G SP+ VTYNTLIDA+C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           K   ++EA  ++  M   G+  N I+ N++++ LC + ++ E   L+     +G   DEV
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y TL+ G+ ++   ++ L L  EM  + + P+  TY  +I  + ++G   +A+++ +++
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G+ P+E T+ T+I GFC +G + +A +  ++M+   F P +VT N L+ G C  G +
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           ++A+   R  + +G   D V+Y+T+I+  C+ER L  AF +  EM EK + PD  TY+++
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L    +L EA      M+  G                 + P  ++Y+  IN +C  G
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRG-----------------LPPDEVTYTSLINAYCVDG 536

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
               AL++ +E  Q+G   +  TY  L+NGL K+ ++
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKART 573



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 146/458 (31%), Positives = 233/458 (50%), Gaps = 50/458 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYNT++DA  KK K+ E   LL  M   G+  N  +YN +++G C  G 
Sbjct: 233 MEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGR 292

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E   +V+ M     +PD  TYN L+NG+C  G L +   L  EM    L P+VVTY T
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352

Query: 121 LIN-----------------------------------RFFESGRSMEAFKLIDELDEHG 145
           LIN                                    F + G   EA+K++ E+   G
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+ VT+N ++  YC  G++ +A  I+R M E G  PD V+Y+T+I   C+   + +AF
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           +M + M  KG+  +T+T ++++  LC ++KL EA+ L     +RG   DEV+Y +LI  Y
Sbjct: 473 QMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAY 532

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             D + ++AL+L DEM +R  +P   TY+ +I GL++  +T+ A  +L +L     +PD+
Sbjct: 533 CVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDD 592

Query: 326 TTFNTIIH---------------GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            T+NT+I                GFC +G + +A +    M++++ KP+    N+++ G 
Sbjct: 593 VTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGH 652

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            R G + KA   +        A  +V    L+ +L +E
Sbjct: 653 SRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALARE 690



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 245/485 (50%), Gaps = 54/485 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   + ++YN++++ L  KG+++EV +L+ +M+ +GLVP+  TYN LV+G+CK G L + 
Sbjct: 272 GVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQG 331

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M      P+V TY  LIN  C AG L  A  +  +M    L P+  TY TLI+ 
Sbjct: 332 LVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDG 391

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G   EA+K++ E+   G  P+ VT+N ++  YC  G++ +A  I+R M E G  PD
Sbjct: 392 FCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPD 451

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+Y+T+I   C+   + +AF+M + M  KG+  +T+T ++++  LC ++KL EA+ L  
Sbjct: 452 VVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFR 511

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG   DEV+Y +LI  Y  D + ++AL+L DEM +R  +P   TY+ +I GL++  
Sbjct: 512 EMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKA 571

Query: 305 KTEQAIDMLNELLQSGMIPDETTF------------------------------------ 328
           +T+ A  +L +L     +PD+ T+                                    
Sbjct: 572 RTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFK 631

Query: 329 --------------NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
                         N +IHG    G V KA   + ++   SF    V    L+  L REG
Sbjct: 632 TMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREG 691

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
           + ++  +  ++ +   +  D+     L+    KE  ++    +L+EM +  L PD     
Sbjct: 692 MNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD----G 747

Query: 435 AIHTA 439
            IH++
Sbjct: 748 GIHSS 752



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 193/391 (49%), Gaps = 22/391 (5%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG-----NMEE 203
           ++   ++++K   + G + KA  ++     +GF+P  ++YN ++DA  +       + ++
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A R+   M R G+  N  T N I+  +  +  L++    +    K G   + V+Y TLI 
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              + +K   A+ L   M    +  +  +YN++I GL   G+  +  +++ E+   G++P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           DE T+NT+++GFC EG + + L   ++MV K   P++VT   L++ +C+ G L +A++ F
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               ++G   +  TY TLI   C++  + +A+ +LSEM      P   TY A+       
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           GR++EA      MVE G                 + P  +SYS  I   C +     A Q
Sbjct: 431 GRVQEAVGILRGMVERG-----------------LPPDVVSYSTVIAGFCRERELGKAFQ 473

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           + EE  +KG+  +  TY +L+ GL  ++K +
Sbjct: 474 MKEEMVEKGVLPDTVTYSSLIQGLCLQQKLV 504



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 22/218 (10%)

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI- 375
           L S        F+ ++      G V KAL   +      F P +++ N +L  L R    
Sbjct: 124 LCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSS 183

Query: 376 ----LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
                + A + FR  +  G + +  TYN +I  +  +  LE   G + +ME++ + P+  
Sbjct: 184 NHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVV 243

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +  A  +  +++EA      M   G                 +  + ISY+  IN 
Sbjct: 244 TYNTLIDASCKKKKVKEAMALLRAMAVGG-----------------VAANLISYNSVING 286

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            C +GR  +  ++ EE R KG+  ++ TY  L+NG  K
Sbjct: 287 LCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCK 324


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 167/520 (32%), Positives = 273/520 (52%), Gaps = 28/520 (5%)

Query: 4   FGCLPDNV-TYNT---ILDALFKK----GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY 55
           F CL D+   YN+   + D + K       +++  + ++  K  G +P   +YN ++   
Sbjct: 128 FQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAI 187

Query: 56  CK-LGWLK-EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
            +  G +K  A  V   M +++  P+V+TYN+LI G+C+ G L++      EME    LP
Sbjct: 188 VRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLP 247

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           +VVTYNTLI+ + + GR  EAF L+  +   G++PN +++N++I   C+EG + +A +I+
Sbjct: 248 NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 307

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   GF+PD VTYNTL++  CK GN  +A  +   M R G+  + +T   +++++C  
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 367

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           + L+ A    +    RG   +E +Y TLI G+ R    N A ++ +EM E    PS  TY
Sbjct: 368 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           NA I G     + E+A+ ++ E+++ G+ PD  +++TII GFC +G++++A Q   +MVE
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           K   PD VT + L+ GLC    L +A    +  +  G   D  TY TLI++ C E  L  
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  L  EM  K   PD  TY+ +   L +  R  EA++    ++                
Sbjct: 548 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY--------------- 592

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             EE  PS ++Y   I E+CS   +K  + + +    KG+
Sbjct: 593 --EESVPSDVTYDTLI-ENCSNIEFKSVVALIKGFCMKGL 629



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 264/522 (50%), Gaps = 37/522 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++      G+L +      +M++ G +PN  TYN L+  YCK+G + EA  +
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M+     P++ +YN++ING C  G ++EA+ + +EM      PD VTYNTL+N + +
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A  +  E+  +G+ P+ VT+  +I   CK   +++A +    M   G  P+  T
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLID   + G + EA+R+++ M   G   + +T N  +H  C  ++++EA  ++    
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   D VSY T+I+G+ R  + +RA ++  EM E+ + P   TY+++I GL +  +  
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A D+  E+L  G+ PDE T+ T+I+ +C EG + KAL  H++M+ K F PD VT ++L+
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GL ++    +A +     I +      VTY+TLI +              S +E K + 
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-------------CSNIEFKSV- 617

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
                  A+       G + EA +    MVE    NH+              P    Y+ 
Sbjct: 618 ------VALIKGFCMKGLMHEADRVFESMVER---NHK--------------PGEAVYNV 654

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+ HC  G    A  +++E    G   +  T + L+  L K
Sbjct: 655 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 696



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 263/528 (49%), Gaps = 64/528 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+ VTYNT++DA  K G+++E   LL  M  +G+ PN  +YN++++G C+ G 
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA  +++ M      PD  TYN L+NG+C  G   +A  +  EM    + P VVTY  
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359

Query: 121 LIN------------RFFESGRSM-----------------------EAFKLIDELDEHG 145
           LIN             FF+  R                         EA+++++E+ E G
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+ VT+N  I  +C   ++++A  +V+ M E G +PD V+Y+T+I   C+ G ++ AF
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 479

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           +M   M  KG+  + +T ++++  LC  ++L EA  L       G   DE +Y TLI  Y
Sbjct: 480 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 539

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             +   N+AL L DEM  +  +P   TY+ +I GL++  +T +A  +L +L+    +P +
Sbjct: 540 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599

Query: 326 TTFNTIIH---------------GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            T++T+I                GFC +G + +A +    MVE++ KP     N+++ G 
Sbjct: 600 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 659

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G L KA   ++  I  G    +VT  TLI +L KE   E+    +SE+    L   R
Sbjct: 660 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE----MSEVIGDTLRSCR 715

Query: 431 YTYAAIHTALVE----SGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
              A +   LVE     G +E      + M + G +      PN+ KT
Sbjct: 716 LNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLL------PNSGKT 757



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 246/454 (54%), Gaps = 19/454 (4%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS--MEAFKLID 139
            +++++  + +  M+++A       +S   +P V++YN++++    S  S  + A ++  
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           E+    + PN  T+NI+I+ +C  G++ K       ME NG  P+ VTYNTLIDA CK G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++EAF ++  M  KG++ N I+ N I++ LC E  + EA+ +L     +G+  DEV+Y 
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           TL+ GY ++   ++AL +  EM    + PS  TY A+I  + ++    +A++  +++   
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ P+E T+ T+I GF  +G + +A +  N+M E  F P +VT N  + G C    +E+A
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 443

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
           L   +  + KG A D V+Y+T+IS  C++  L+ AF +  EM EK + PD  TY+++   
Sbjct: 444 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 503

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L E  RL EA   +  M++ G                 + P   +Y+  IN +C +G   
Sbjct: 504 LCEMRRLTEACDLSQEMLDMG-----------------LPPDEFTYTTLINAYCVEGDLN 546

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            AL + +E   KG   +  TY  L+NGL K+ ++
Sbjct: 547 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 580



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 198/402 (49%), Gaps = 28/402 (6%)

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG---- 199
           H    ++   ++M+K Y     ID+A   +   + +GF P  ++YN+++DA  ++     
Sbjct: 136 HVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVK 195

Query: 200 -NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
            + EE +R M    R  +  N  T N ++   C   +L +         + G   + V+Y
Sbjct: 196 LSAEEVYREMI---RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTY 252

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TLI  Y +  + + A  L   M  + + P+  +YN +I GL + G  ++A ++L E+  
Sbjct: 253 NTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY 312

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G  PDE T+NT+++G+C EG   +AL  H +MV     P +VT   L++ +C+   L +
Sbjct: 313 KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNR 372

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA-IH 437
           A++FF    ++G   +  TY TLI    ++  L +A+ +L+EM E    P   TY A IH
Sbjct: 373 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIH 432

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
              V   R+EEA      MVE G                 + P  +SYS  I+  C +G 
Sbjct: 433 GHCVLE-RMEEALGVVQEMVEKG-----------------LAPDVVSYSTIISGFCRKGE 474

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              A Q+ +E  +KG++ +  TY +L+ GL + R+ +++A D
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR-LTEACD 515



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 27/297 (9%)

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           L ++Y + NS+S          +  ++  Y      ++A+   +  K    MP   +YN+
Sbjct: 131 LKDSYHVYNSSS--------AVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNS 182

Query: 296 MIWGLSQSGKTEQ--AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           ++  + +S  + +  A ++  E+++S + P+  T+N +I GFCS G+++K L    +M  
Sbjct: 183 VLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMER 242

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               P++VT N L+   C+ G +++A    +S   KG   + ++YN +I+ LC+E  +++
Sbjct: 243 NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKE 302

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A+ +L EM  K   PD  TY  +     + G   +A    + MV  G             
Sbjct: 303 AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG------------- 349

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
               + PS ++Y+  IN  C       A++ F++ R +G+  N+ TY  L++G  ++
Sbjct: 350 ----VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQ 402


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 271/526 (51%), Gaps = 17/526 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G LPD  TY+T ++A  K    +  + +  +M+++    N  TYN+++SG C+ G 
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA    + M      PD +TY  L+NG C    L+EA  L  EM    L P++V Y T
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + G++ EAF ++ E+   G++PN + ++ +I+  CK G++ +A K+++ M + G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN L+  + +  + + AF +++ M   G+  N  +   +++ LC   +  EA 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   +   Y  LI G+ ++   + A +  ++M +  + P  F YN++I GL
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S  G+ E+A +   ++ + G++PDE T++ +IHG+C  G +EKA Q   +M+    KP+ 
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   LL G  +    EK     +S +  G   D+  Y  +I +L +   +E AF +L+E
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +E+  L PD + Y+++ + L +   +E+A      M + G                 ++P
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG-----------------LEP 696

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
             + Y+  I+  C  G    A  +F+    KG+  N  TY  L++G
Sbjct: 697 GIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDG 742



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 256/524 (48%), Gaps = 17/524 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V Y T++D   K+GK  E  D+L +M   G+ PN+  Y+ L+ G CK+G L  A
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +    PD +TYN L+ G       + AF L  EM +  +LP+V +Y  +IN 
Sbjct: 403 SKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G S EA  L++E+   G+KPNA  +  +I  + KEG I  AC+ +  M +    PD
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN+LI      G MEEA      + ++GL  +  T + ++H  C    L++A  LL 
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +  +Y  L+ GYF+     +   +   M      P    Y  +I  LS+S 
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E A  +L E+ ++G++PD   ++++I G C    +EKA+   ++M ++  +P IV  N
Sbjct: 643 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYN 702

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G CR G + +A   F S + KG   + VTY  LI   CK   + DAF L  EM ++
Sbjct: 703 ALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDR 762

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN--------HQVVQPNTSKTPE 476
            + PD + Y  + T   ++  LE+A   T  M   G  N        H   +    +  E
Sbjct: 763 GIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETE 822

Query: 477 ---------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
                    EI P++ +  + ++E    G+  +A ++F E +QK
Sbjct: 823 KLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 49/353 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  TY+ ++    K G L +   LL  M   GL PN  TY  L+ GY K    ++ 
Sbjct: 553 GLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKV 612

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M  +   PD   Y ++I     +  +E AF +  E+E   L+PD+  Y++LI+ 
Sbjct: 613 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 672

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A  L+DE+ + G++P  V +N +I  +C+ G I +A  +  ++   G  P+
Sbjct: 673 LCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPN 732

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK--------------------------- 217
           CVTY  LID NCK G++ +AF +   M  +G+                            
Sbjct: 733 CVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 792

Query: 218 -------MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
                   N    NT++H  C   KL E   LL+    R    +  +   +++ + +  K
Sbjct: 793 EMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGK 852

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              A +++ E+++++               SQS  T++   +  +++  G+IP
Sbjct: 853 LGEAHRVFAELQQKKA--------------SQSA-TDRFSLLFTDMINKGLIP 890


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 260/527 (49%), Gaps = 18/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P+ V Y+T++D   ++G  +E   ++ +M   G+ PN+ TY+ L+ G CKLG 
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A R++  MT+   + D  TYN++I G       EEAF L  EM    + P+V TY+ 
Sbjct: 399 MGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSI 458

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + G S  A  L++++   G+KPNA  +  +I  YC+EG    AC+ ++ M    
Sbjct: 459 IINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTREN 518

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD   YN+LI      G M+EA    D M  KG + N  T   ++H       L++A 
Sbjct: 519 LTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAE 578

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   ++  Y  ++ GYF+ +   +       M E+ +MP    Y  +I  L
Sbjct: 579 QLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNL 638

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S SG  + A+ +L+ + ++G++PD   + ++I GFC    +EKA+   ++M +K  +P I
Sbjct: 639 SSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGI 698

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N L+ G C+   +  A   F S I KG   + VTY TLI   CK   + DA  L +E
Sbjct: 699 SCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNE 758

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + + PD + Y+ +      SG L++A   T  M+  G   + ++             
Sbjct: 759 MLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG---YAIIS------------ 803

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              S++  ++  C +G+ ++ ++       K I  +  T  N++ GL
Sbjct: 804 ---SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGL 847



 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 279/550 (50%), Gaps = 30/550 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  PD  TY+T+++A  K   L   + ++ +M++ G   N  TYN L+ G C+ G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA      M     +PD +TY  +ING C  G  ++A  L  EM    L+P+VV Y+T
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   G + EAFK++ E+   G++PN +T++ +I+  CK G++ +A +I++ M + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D +TYN +I+ + +  N EEAF +++ M + G+  N  T + I++ LC   + + A 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   +   Y  LI+GY R+   + A +   +M    + P  + YN++I GL
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S  GK ++AI+  +E+L+ G  P++ T+  +IHG+   G +EKA Q  ++M+     P+ 
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                +L G  +   LEK     +S + KG   D+  Y  +I +L     ++ A  +LS 
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID- 479
           +E+  L PD   Y ++ +   ++  +E+A      M + G      ++P  S     ID 
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG------IEPGISCYNALIDG 707

Query: 480 -----------------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
                                  P+ ++Y+  I+ +C  G  +DA+ ++ E   +G+A +
Sbjct: 708 FCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPD 767

Query: 517 KSTYMNLMNG 526
              Y  L  G
Sbjct: 768 AFVYSVLAAG 777



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 258/519 (49%), Gaps = 9/519 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + D +TYN +++   ++    E   LL++M+K G+ PN  TY+I+++G C++G 
Sbjct: 409 MTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGE 468

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A  +++ M  +   P+ + Y  LI+G+C  G    A    K+M    L PD+  YN+
Sbjct: 469 SERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNS 528

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G+  EA +  DE+ E G +PN  T+  +I  Y   G ++KA +++  M  +G
Sbjct: 529 LIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG 588

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+   Y  +++   K+ N+E+    +  M  KGL  +      ++H L     +  A 
Sbjct: 589 LNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAV 648

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+   K G   D + YG+LI+G+ +     +A+ L DEM ++ I P    YNA+I G 
Sbjct: 649 SVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGF 708

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S     A ++ N ++  G+ P+  T+ T+I G+C  G +  A+  +N+M+ +   PD 
Sbjct: 709 CKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDA 768

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              ++L +G    G L++AL      I +G A+ S ++NTL+   CK  +L++    L  
Sbjct: 769 FVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGFCKRGKLQETVKFLHV 827

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN--HQVVQPNTSKTPEEI 478
           M +K + P   T   I   L E+G+L EA    +I VE  + N  H+     +S   + I
Sbjct: 828 MMDKDIVPSLLTVENIVIGLGEAGKLSEAH---TIFVELQQKNASHRDTDHLSSLFTDMI 884

Query: 479 DPSSISYS---EKINEHCSQGRYKDALQIFEETRQKGIA 514
           +   +        I  HC QG    AL + +    KG A
Sbjct: 885 NQGLVPLDVIHNMIQSHCKQGYLDKALMLHDALVAKGRA 923



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G+ PD  T++T+I  +C    +E A +   +M E     ++VT N L+ GLCR G +E+
Sbjct: 237 AGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEE 296

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A  + +     G   D  TY  +I+ LCK  R + A  LL EM    L P+   Y+ +  
Sbjct: 297 AFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
             +  G  +EA K    M   G      VQPN            I+Y   I   C  GR 
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAG------VQPN-----------KITYDNLIRGLCKLGRM 399

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             A +I ++  + G   +  TY  ++ G +++ 
Sbjct: 400 GRASRILKQMTKIGYMADTMTYNLVIEGHLRQH 432


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 146/445 (32%), Positives = 249/445 (55%), Gaps = 3/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   +++    + GK  +   ++  +++ G VP+  TYN+L+SGYCK G +  A
Sbjct: 144 GDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA 203

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V+D M      PDV TYN ++   C++G L++A  +       +  PDV+TY  LI  
Sbjct: 204 LQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 260

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A KL+DE+   G KP+ VT+N++I   CKEG++D+A K + NM   G  P+
Sbjct: 261 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N ++ + C  G   +A +++  M RKG   + +T N +++ LC +  L  A  +L 
Sbjct: 321 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 380

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + +SY  L+ G+ +++K +RA++  D M  R   P   TYN ++  L + G
Sbjct: 381 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 440

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+++LN+L   G  P   T+NT+I G    G+ E+A++  ++M  K  KPDI+T +
Sbjct: 441 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 500

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+SGL REG +++A+KFF      G   +++TYN+++  LCK R+ + A   L+ M  K
Sbjct: 501 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
           +  P   TY  +   +   G  +EA
Sbjct: 561 RCKPTEATYTILIEGIAYEGLAKEA 585



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/426 (34%), Positives = 239/426 (56%), Gaps = 3/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G +PD +TYN ++    K G   E+ + L  + +  + P+  TYN ++   C  G 
Sbjct: 175 LEQSGAVPDVITYNVLISGYCKSG---EIDNALQVLDRMNVAPDVVTYNTILRTLCDSGK 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+AM V+D   Q +  PDV TY +LI   C    + +A +L  EM +    PDVVTYN 
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + GR  EA K ++ +  +G +PN +THNI+++  C  G+   A K++ +M   G
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VT+N LI+  C+ G +  A  +++ M   G   N+++ N +LH  C EKK+D A 
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+    RG Y D V+Y TL+T   +D K + A+++ +++  +   P   TYN +I GL
Sbjct: 412 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 471

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ GKTE+AI +L+E+ + G+ PD  T+++++ G   EG+V++A++F + +     +P+ 
Sbjct: 472 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 531

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++ GLC+    ++A+ F    I K       TY  LI  +  E   ++A  LL+E
Sbjct: 532 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591

Query: 421 MEEKKL 426
           +  + L
Sbjct: 592 LCSRGL 597



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 218/417 (52%), Gaps = 21/417 (5%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           + R   +G   + FK ++ +   G  P+ +    +I+ +C+ GK  KA  ++  +E++G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD +TYN LI   CK+G ++ A +++D   R  +  + +T NTIL TLC   KL +A  
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L+   ++  Y D ++Y  LI    ++    +A+KL DEM+ +   P   TYN +I G+ 
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+ ++AI  LN +   G  P+  T N I+   CS G+   A +  + M+ K   P +V
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T NIL++ LCR+G+L +A+       + G   +S++YN L+   CKE++++ A   L  M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             +   PD  TY  + TAL + G+++ A +  + +   G                   P 
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-----------------CSPV 460

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            I+Y+  I+     G+ + A+++ +E R+KG+  +  TY +L++GL  R   + +A+
Sbjct: 461 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL-SREGKVDEAI 516



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 178/322 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN +++ + K+G+L+E    L++M   G  PN  T+NI++   C  G 
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A +++  M +    P V T+N+LIN  C  G+L  A  + ++M      P+ ++YN 
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +   A + +D +   G  P+ VT+N ++   CK+GK+D A +I+  +   G
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  +TYNT+ID   K G  E A +++D M RKGLK + IT ++++  L  E K+DEA 
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +     G   + ++Y +++ G  +  + +RA+     M  ++  P+  TY  +I G+
Sbjct: 517 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
           +  G  ++A+D+LNEL   G++
Sbjct: 577 AYEGLAKEALDLLNELCSRGLV 598



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TYNT++D L K GK      LL +M+++GL P+  TY+ LVSG  + G + EA
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++    +      P+  TYN ++ G C +   + A      M S +  P   TY  LI  
Sbjct: 516 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
               G + EA  L++EL   G+   +    + +K
Sbjct: 576 IAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 609


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 276/528 (52%), Gaps = 17/528 (3%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P   T N IL ++ K  +   V  L  +M  +G+ PN  T+NIL++G C  G LK+A  +
Sbjct: 947  PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 1006

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  M +N  +P + TYN L+N +C  G  + A  L   M    +  DV TYN  I+    
Sbjct: 1007 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 1066

Query: 128  SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            + RS +A+ L+ ++ +  I PN VT+N +I  + KEGKI  A ++   M +   SP+CVT
Sbjct: 1067 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 1126

Query: 188  YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            YN LI  +C  G+ EEA R++D M   GL++N +T  T+L+ LC  +K + A  LL    
Sbjct: 1127 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186

Query: 248  KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 +  ++Y  LI G  ++   + A++L   M +  + P   TY+++I G  + G  +
Sbjct: 1187 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 1246

Query: 308  QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
             A +++  + +SG++ ++  ++T+I+ FC  G V +A++ +  M       D  TCN+L+
Sbjct: 1247 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 1306

Query: 368  SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            S LCR+G L +A KF       G   +S+TY+ +I+         +AF    +M +    
Sbjct: 1307 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH 1366

Query: 428  PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            P  +TY ++   L + G L EA+KF + +       H +        P  +D  S+ Y+ 
Sbjct: 1367 PSFFTYGSLLKGLCKGGNLVEAKKFLNRL-------HYI--------PGAVD--SVMYNT 1409

Query: 488  KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             + E C  G   +A+ +F++  Q  +  +  TY +L+ GL ++ K+++
Sbjct: 1410 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 1457



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 163/570 (28%), Positives = 263/570 (46%), Gaps = 52/570 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+  T+N +++ L  +G L +  +LL  M++ G VP   TYN L++ YCK G  K A
Sbjct: 979  GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + ++D M       DV TYN+ I+  C      +A+ L K+M    + P+ VTYNTLIN 
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F + G+   A ++ +E+ +  + PN VT+N +I  +C  G  ++A +++ +ME  G   +
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             VTY TL++  CK    E A R+++ M    + +  I    ++  LC    LDEA  L+ 
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 1218

Query: 245  SASKRGYYLDEVSYGTLITGYFR-----------------------------------DE 269
            +  K G   D ++Y +LI G+ R                                     
Sbjct: 1219 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHG 1278

Query: 270  KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
                A+K++  M         FT N ++  L + GK  +A   L  + + G++P+  T++
Sbjct: 1279 NVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYD 1338

Query: 330  TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
             II+G+ S G    A  F + M++    P   T   LL GLC+ G L +A KF       
Sbjct: 1339 CIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYI 1398

Query: 390  GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
              AVDSV YNTL++  CK   L +A  L  +M +  + PD YTY+++ T L   G+   A
Sbjct: 1399 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTA 1458

Query: 450  QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                            V    T+     + P+ + Y+  ++     G  K A   FEE  
Sbjct: 1459 ----------------VCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 1502

Query: 510  QKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            +KG   +   +  +++    RR  + KA D
Sbjct: 1503 KKGTCPDTVAFNAIIDS-CSRRGQMMKAND 1531



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 252/531 (47%), Gaps = 18/531 (3%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G   + VTY T+L+ L K  K    + LL  M+   +V     Y +L+ G CK G 
Sbjct: 1150 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 1209

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA+++V  M ++   PDV TY+ LING+C  G ++ A  +   M    L+ + + Y+T
Sbjct: 1210 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 1269

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI  F + G   EA K+   ++ +G   +  T N+++   C++GK+ +A K + +M   G
Sbjct: 1270 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 1329

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              P+ +TY+ +I+     G+   AF   D M + G   +  T  ++L  LC    L EA 
Sbjct: 1330 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 1389

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              LN        +D V Y TL+    +    + A+ L+D+M +  ++P ++TY++++ GL
Sbjct: 1390 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 1449

Query: 301  SQSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + GK   A+ +    +  G + P+   +  ++ G    G  + A  F  +M++K   PD
Sbjct: 1450 CRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPD 1509

Query: 360  IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             V  N ++    R G + KA  FF +    G   +  TYN L+    K++ L     L S
Sbjct: 1510 TVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYS 1569

Query: 420  EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
             M  + + PD+ T+ ++   L +SG  +   K    M+  G +  Q              
Sbjct: 1570 TMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ-------------- 1615

Query: 480  PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                +++  IN++   G+ + A  +       G+  ++ TY ++ NGL K+
Sbjct: 1616 ---FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 1663



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 244/511 (47%), Gaps = 56/511 (10%)

Query: 56   CKLGWLKEAM--RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
            C++G   +++   ++D      S+P V  +++LI  +   GM++ A    + +  +   P
Sbjct: 890  CQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKP 947

Query: 114  DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             V T N ++    +  R+   + L  E+ + GI PN  T NI+I   C EG + KA  ++
Sbjct: 948  SVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLL 1007

Query: 174  RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
            + MEENGF P  VTYNTL++  CK G  + A  ++D M  KG++ +  T N  +  LC  
Sbjct: 1008 KQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTN 1067

Query: 234  KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
             +  +AY+LL    K     +EV+Y TLI G+ ++ K   A ++++EM +  + P+  TY
Sbjct: 1068 HRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTY 1127

Query: 294  NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT----------------------- 330
            NA+I G    G  E+A+ +L+ +  +G+  +E T+ T                       
Sbjct: 1128 NALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRV 1187

Query: 331  ------------IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
                        +I G C  G +++A+Q    M +    PD++T + L++G CR G ++ 
Sbjct: 1188 NDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKS 1247

Query: 379  ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
            A +        G  ++ + Y+TLI + C+   + +A  + + M     G D +T   + +
Sbjct: 1248 AKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVS 1307

Query: 439  ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            +L   G+L EA+KF   M   G +                 P+SI+Y   IN + S G  
Sbjct: 1308 SLCRDGKLGEAEKFLCHMSRIGLV-----------------PNSITYDCIINGYGSIGDP 1350

Query: 499  KDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             +A   F++  + G   +  TY +L+ GL K
Sbjct: 1351 LNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 250/539 (46%), Gaps = 21/539 (3%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D+ T N ++ +L + GKL E    L  M + GLVPN  TY+ +++GY  +G    A    
Sbjct: 1298 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 1357

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            D M +    P  +TY  L+ G C  G L EA +    +  +    D V YNTL+    +S
Sbjct: 1358 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 1417

Query: 129  GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-IDKACKIVRNMEENGFSPDCVT 187
            G   EA  L D++ ++ + P++ T++ ++   C++GK +   C     M      P+ V 
Sbjct: 1418 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 1477

Query: 188  YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            Y  L+D   KAG+ + AF   + M +KG   +T+  N I+ +     ++ +A    ++  
Sbjct: 1478 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 1537

Query: 248  KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
              G   +  +Y  L+ G+ + +   R L L+  M    I P   T++++I GLS+SG  +
Sbjct: 1538 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 1597

Query: 308  QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
              + +L +++  G + D+ TFN +I+ +   G++ KA    N M      PD  T N + 
Sbjct: 1598 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 1657

Query: 368  SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            +GL ++    ++       +  G       Y TLI+ +C+   ++ AF L  EME    G
Sbjct: 1658 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 1717

Query: 428  PDRYTYAAIHTALVESGRLEEAQ----------------KFTSIMVETGKINHQVVQPNT 471
                  +A+   L+  G+ E+A                  FT++M    + + ++ +   
Sbjct: 1718 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCR-DAKIAEALK 1776

Query: 472  SKTPEEI---DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             K   E+       ++Y+  I   C+ G    A +++EE R + +  N +TY  L++ +
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 259/577 (44%), Gaps = 54/577 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD +TY+++++   + G +   ++++  M + GLV N+  Y+ L+  +C+ G + EA
Sbjct: 1224 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 1283

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            M+V  +M  N    D +T N+L++  C  G L EA +    M  + L+P+ +TY+ +IN 
Sbjct: 1284 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 1343

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +   G  + AF   D++ + G  P+  T+  ++K  CK G + +A K +  +     + D
Sbjct: 1344 YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVD 1403

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             V YNTL+   CK+GN+ EA  + D M +  +  ++ T +++L  LC + K   A  L  
Sbjct: 1404 SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 1463

Query: 245  SASKRG-YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            +A  RG  + + V Y  L+ G  +      A   ++EM ++   P T  +NA+I   S+ 
Sbjct: 1464 TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 1523

Query: 304  GKTEQAIDMLNEL-----------------------------------LQSGMIPDETTF 328
            G+  +A D  + +                                   ++ G+ PD+ TF
Sbjct: 1524 GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 1583

Query: 329  NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            +++I G    G  +  ++   KM+ +    D  T NIL++     G + KA         
Sbjct: 1584 HSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNT 1643

Query: 389  KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
             G   D  TYN + + L K+    ++  +L EM E  + P    Y  +   +   G ++ 
Sbjct: 1644 LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 1703

Query: 449  AQKFTSIMVETGKINHQVVQP-------NTSKTPE-----------EIDPSSISYSEKIN 490
            A K    M   G  +H+V +        +  KT +            + P+  +++  ++
Sbjct: 1704 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1763

Query: 491  EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              C   +  +AL++       G+ ++   Y  L+ G+
Sbjct: 1764 RFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 1800



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 211/459 (45%), Gaps = 7/459 (1%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D+V YNT+L    K G L+E   L   M +  ++P+  TY+ L++G C+ G   +A+  V
Sbjct: 1403 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG---KAVTAV 1459

Query: 69   DL----MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             L    M +    P+   Y  L++G   AG  + AF   +EM      PD V +N +I+ 
Sbjct: 1460 CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 1519

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                G+ M+A      +   G+ PN  T+NI++  + K+  + +   +   M   G  PD
Sbjct: 1520 CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 1579

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +T+++LI    K+G  +   +++  M  +G   +  T N +++      K+ +A+ L+N
Sbjct: 1580 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 1639

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +  G + D  +Y  +  G  +      +  +  EM E  ++P    Y  +I G+ + G
Sbjct: 1640 FMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVG 1699

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              + A  + +E+   G    E   + ++ G    G+ E A+   + M+     P I T  
Sbjct: 1700 DIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFT 1759

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L+   CR+  + +ALK      L G  +D V YN LI  +C       AF L  EM  +
Sbjct: 1760 TLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHR 1819

Query: 425  KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
             L P+  TYA +  A+  +  L + +K  + + E G I+
Sbjct: 1820 DLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1858



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 1/421 (0%)

Query: 7    LPDNVTYNTILDALFKKGK-LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            LPD+ TY+++L  L +KGK +  V    + M +  L PN   Y  LV G  K G  K A 
Sbjct: 1436 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 1495

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
               + M +  + PD   +N +I+     G + +A      M    + P++ TYN L++ F
Sbjct: 1496 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 1555

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +    +    L   +   GI P+ +T + +I    K G  D   K++  M   G   D 
Sbjct: 1556 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ 1615

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             T+N LI+   ++G M +AF +++ M   G+  +  T N I + L  +    E+ ++L+ 
Sbjct: 1616 FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 1675

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              + G       Y TLI G  R      A KL DEM+           +AM+ GL   GK
Sbjct: 1676 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 1735

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            TE A+ +L+ +L+  ++P   TF T++H FC + ++ +AL+    M     K D+V  N+
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1795

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            L+ G+C  G    A + +     +    +  TY  L+ ++     L     LL++++E+ 
Sbjct: 1796 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855

Query: 426  L 426
            L
Sbjct: 1856 L 1856



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 35/353 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD V +N I+D+  ++G++ +  D  S M+  G+ PN  TYNIL+ G+ K   L   
Sbjct: 1505 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 1564

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +   M +    PD  T++ LI G   +G+ +   +L  +M     L D  T+N LIN+
Sbjct: 1565 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINK 1624

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            + ESG+  +AF L++ ++  G+ P+  T+N +     K+    ++  ++  M ENG  P 
Sbjct: 1625 YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 1684

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKG----------------------------- 215
               Y TLI+  C+ G+++ AF++ D M   G                             
Sbjct: 1685 HAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 1744

Query: 216  --LKMNTI----TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
              L+M  +    T  T++H  C + K+ EA  L       G  LD V+Y  LI G   + 
Sbjct: 1745 HMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANG 1804

Query: 270  KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
             +  A +L++EM+ R + P+  TY  ++  +S +    Q   +L +L + G+I
Sbjct: 1805 DSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 146/445 (32%), Positives = 249/445 (55%), Gaps = 3/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   +++    + GK  +   ++  +++ G VP+  TYN+L+SGYCK G +  A
Sbjct: 87  GDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA 146

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V+D M      PDV TYN ++   C++G L++A  +       +  PDV+TY  LI  
Sbjct: 147 LQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 203

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A KL+DE+   G KP+ VT+N++I   CKEG++D+A K + NM   G  P+
Sbjct: 204 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 263

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N ++ + C  G   +A +++  M RKG   + +T N +++ LC +  L  A  +L 
Sbjct: 264 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 323

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + +SY  L+ G+ +++K +RA++  D M  R   P   TYN ++  L + G
Sbjct: 324 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 383

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+++LN+L   G  P   T+NT+I G    G+ E+A++  ++M  K  KPDI+T +
Sbjct: 384 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+SGL REG +++A+KFF      G   +++TYN+++  LCK R+ + A   L+ M  K
Sbjct: 444 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
           +  P   TY  +   +   G  +EA
Sbjct: 504 RCKPTEATYTILIEGIAYEGLAKEA 528



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/426 (34%), Positives = 239/426 (56%), Gaps = 3/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G +PD +TYN ++    K G   E+ + L  + +  + P+  TYN ++   C  G 
Sbjct: 118 LEQSGAVPDVITYNVLISGYCKSG---EIDNALQVLDRMNVAPDVVTYNTILRTLCDSGK 174

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+AM V+D   Q +  PDV TY +LI   C    + +A +L  EM +    PDVVTYN 
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + GR  EA K ++ +  +G +PN +THNI+++  C  G+   A K++ +M   G
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VT+N LI+  C+ G +  A  +++ M   G   N+++ N +LH  C EKK+D A 
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 354

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+    RG Y D V+Y TL+T   +D K + A+++ +++  +   P   TYN +I GL
Sbjct: 355 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 414

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ GKTE+AI +L+E+ + G+ PD  T+++++ G   EG+V++A++F + +     +P+ 
Sbjct: 415 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 474

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++ GLC+    ++A+ F    I K       TY  LI  +  E   ++A  LL+E
Sbjct: 475 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534

Query: 421 MEEKKL 426
           +  + L
Sbjct: 535 LCSRGL 540



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 218/417 (52%), Gaps = 21/417 (5%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           + R   +G   + FK ++ +   G  P+ +    +I+ +C+ GK  KA  ++  +E++G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD +TYN LI   CK+G ++ A +++D   R  +  + +T NTIL TLC   KL +A  
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L+   ++  Y D ++Y  LI    ++    +A+KL DEM+ +   P   TYN +I G+ 
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+ ++AI  LN +   G  P+  T N I+   CS G+   A +  + M+ K   P +V
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T NIL++ LCR+G+L +A+       + G   +S++YN L+   CKE++++ A   L  M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             +   PD  TY  + TAL + G+++ A +  + +   G                   P 
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-----------------CSPV 403

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            I+Y+  I+     G+ + A+++ +E R+KG+  +  TY +L++GL  R   + +A+
Sbjct: 404 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL-SREGKVDEAI 459



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 178/322 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN +++ + K+G+L+E    L++M   G  PN  T+NI++   C  G 
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A +++  M +    P V T+N+LIN  C  G+L  A  + ++M      P+ ++YN 
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +   A + +D +   G  P+ VT+N ++   CK+GK+D A +I+  +   G
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  +TYNT+ID   K G  E A +++D M RKGLK + IT ++++  L  E K+DEA 
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +     G   + ++Y +++ G  +  + +RA+     M  ++  P+  TY  +I G+
Sbjct: 460 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
           +  G  ++A+D+LNEL   G++
Sbjct: 520 AYEGLAKEALDLLNELCSRGLV 541



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TYNT++D L K GK      LL +M+++GL P+  TY+ LVSG  + G + EA
Sbjct: 399 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++    +      P+  TYN ++ G C +   + A      M S +  P   TY  LI  
Sbjct: 459 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
               G + EA  L++EL   G+   +    + +K
Sbjct: 519 IAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 552


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 276/528 (52%), Gaps = 17/528 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T N IL ++ K  +   V  L  +M  +G+ PN  T+NIL++G C  G LK+A  +
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +N  +P + TYN L+N +C  G  + A  L   M    +  DV TYN  I+    
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + RS +A+ L+ ++ +  I PN VT+N +I  + KEGKI  A ++   M +   SP+CVT
Sbjct: 316 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 375

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI  +C  G+ EEA R++D M   GL++N +T  T+L+ LC  +K + A  LL    
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                +  ++Y  LI G  ++   + A++L   M +  + P   TY+++I G  + G  +
Sbjct: 436 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A +++  + +SG++ ++  ++T+I+ FC  G V +A++ +  M       D  TCN+L+
Sbjct: 496 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 555

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           S LCR+G L +A KF       G   +S+TY+ +I+         +AF    +M +    
Sbjct: 556 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH 615

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P  +TY ++   L + G L EA+KF + +       H +        P  +D  S+ Y+ 
Sbjct: 616 PSFFTYGSLLKGLCKGGNLVEAKKFLNRL-------HYI--------PGAVD--SVMYNT 658

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
            + E C  G   +A+ +F++  Q  +  +  TY +L+ GL ++ K+++
Sbjct: 659 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 706



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 163/570 (28%), Positives = 263/570 (46%), Gaps = 52/570 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  T+N +++ L  +G L +  +LL  M++ G VP   TYN L++ YCK G  K A
Sbjct: 228 GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 287

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M       DV TYN+ I+  C      +A+ L K+M    + P+ VTYNTLIN 
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+   A ++ +E+ +  + PN VT+N +I  +C  G  ++A +++ +ME  G   +
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TL++  CK    E A R+++ M    + +  I    ++  LC    LDEA  L+ 
Sbjct: 408 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 467

Query: 245 SASKRGYYLDEVSYGTLITGYFR-----------------------------------DE 269
           +  K G   D ++Y +LI G+ R                                     
Sbjct: 468 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHG 527

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               A+K++  M         FT N ++  L + GK  +A   L  + + G++P+  T++
Sbjct: 528 NVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYD 587

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            II+G+ S G    A  F + M++    P   T   LL GLC+ G L +A KF       
Sbjct: 588 CIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYI 647

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
             AVDSV YNTL++  CK   L +A  L  +M +  + PD YTY+++ T L   G+   A
Sbjct: 648 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTA 707

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                           V    T+     + P+ + Y+  ++     G  K A   FEE  
Sbjct: 708 ----------------VCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 751

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +KG   +   +  +++    RR  + KA D
Sbjct: 752 KKGTCPDTVAFNAIIDS-CSRRGQMMKAND 780



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 252/531 (47%), Gaps = 18/531 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   + VTY T+L+ L K  K    + LL  M+   +V     Y +L+ G CK G 
Sbjct: 399 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 458

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+++V  M ++   PDV TY+ LING+C  G ++ A  +   M    L+ + + Y+T
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 518

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + G   EA K+   ++ +G   +  T N+++   C++GK+ +A K + +M   G
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 578

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TY+ +I+     G+   AF   D M + G   +  T  ++L  LC    L EA 
Sbjct: 579 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 638

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             LN        +D V Y TL+    +    + A+ L+D+M +  ++P ++TY++++ GL
Sbjct: 639 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 698

Query: 301 SQSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + GK   A+ +    +  G + P+   +  ++ G    G  + A  F  +M++K   PD
Sbjct: 699 CRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPD 758

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            V  N ++    R G + KA  FF +    G   +  TYN L+    K++ L     L S
Sbjct: 759 TVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYS 818

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M  + + PD+ T+ ++   L +SG  +   K    M+  G +  Q              
Sbjct: 819 TMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ-------------- 864

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
               +++  IN++   G+ + A  +       G+  ++ TY ++ NGL K+
Sbjct: 865 ---FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 912



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 234/489 (47%), Gaps = 54/489 (11%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           S+P V  +++LI  +   GM++ A    + +  +   P V T N ++    +  R+   +
Sbjct: 161 SIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L  E+ + GI PN  T NI+I   C EG + KA  +++ MEENGF P  VTYNTL++  
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK G  + A  ++D M  KG++ +  T N  +  LC   +  +AY+LL    K     +E
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y TLI G+ ++ K   A ++++EM +  + P+  TYNA+I G    G  E+A+ +L+ 
Sbjct: 339 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 398

Query: 316 LLQSGMIPDETTFNT-----------------------------------IIHGFCSEGQ 340
           +  +G+  +E T+ T                                   +I G C  G 
Sbjct: 399 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 458

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           +++A+Q    M +    PD++T + L++G CR G ++ A +        G  ++ + Y+T
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 518

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           LI + C+   + +A  + + M     G D +T   + ++L   G+L EA+KF   M   G
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 578

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
            +                 P+SI+Y   IN + S G   +A   F++  + G   +  TY
Sbjct: 579 LV-----------------PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 621

Query: 521 MNLMNGLIK 529
            +L+ GL K
Sbjct: 622 GSLLKGLCK 630



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 250/539 (46%), Gaps = 21/539 (3%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D+ T N ++ +L + GKL E    L  M + GLVPN  TY+ +++GY  +G    A    
Sbjct: 547  DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 606

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            D M +    P  +TY  L+ G C  G L EA +    +  +    D V YNTL+    +S
Sbjct: 607  DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 666

Query: 129  GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-IDKACKIVRNMEENGFSPDCVT 187
            G   EA  L D++ ++ + P++ T++ ++   C++GK +   C     M      P+ V 
Sbjct: 667  GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 726

Query: 188  YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            Y  L+D   KAG+ + AF   + M +KG   +T+  N I+ +     ++ +A    ++  
Sbjct: 727  YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 786

Query: 248  KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
              G   +  +Y  L+ G+ + +   R L L+  M    I P   T++++I GLS+SG  +
Sbjct: 787  WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 846

Query: 308  QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
              + +L +++  G + D+ TFN +I+ +   G++ KA    N M      PD  T N + 
Sbjct: 847  LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 906

Query: 368  SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            +GL ++    ++       +  G       Y TLI+ +C+   ++ AF L  EME    G
Sbjct: 907  NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 966

Query: 428  PDRYTYAAIHTALVESGRLEEAQ----------------KFTSIMVETGKINHQVVQPNT 471
                  +A+   L+  G+ E+A                  FT++M    + + ++ +   
Sbjct: 967  SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCR-DAKIAEALK 1025

Query: 472  SKTPEEI---DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             K   E+       ++Y+  I   C+ G    A +++EE R + +  N +TY  L++ +
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 259/577 (44%), Gaps = 54/577 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD +TY+++++   + G +   ++++  M + GLV N+  Y+ L+  +C+ G + EA
Sbjct: 473  GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 532

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            M+V  +M  N    D +T N+L++  C  G L EA +    M  + L+P+ +TY+ +IN 
Sbjct: 533  MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 592

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +   G  + AF   D++ + G  P+  T+  ++K  CK G + +A K +  +     + D
Sbjct: 593  YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVD 652

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             V YNTL+   CK+GN+ EA  + D M +  +  ++ T +++L  LC + K   A  L  
Sbjct: 653  SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 712

Query: 245  SASKRG-YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            +A  RG  + + V Y  L+ G  +      A   ++EM ++   P T  +NA+I   S+ 
Sbjct: 713  TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 772

Query: 304  GKTEQAIDMLNEL-----------------------------------LQSGMIPDETTF 328
            G+  +A D  + +                                   ++ G+ PD+ TF
Sbjct: 773  GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 832

Query: 329  NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            +++I G    G  +  ++   KM+ +    D  T NIL++     G + KA         
Sbjct: 833  HSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNT 892

Query: 389  KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
             G   D  TYN + + L K+    ++  +L EM E  + P    Y  +   +   G ++ 
Sbjct: 893  LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 952

Query: 449  AQKFTSIMVETGKINHQVVQP-------NTSKTPE-----------EIDPSSISYSEKIN 490
            A K    M   G  +H+V +        +  KT +            + P+  +++  ++
Sbjct: 953  AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1012

Query: 491  EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              C   +  +AL++       G+ ++   Y  L+ G+
Sbjct: 1013 RFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 1049



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 211/459 (45%), Gaps = 7/459 (1%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D+V YNT+L    K G L+E   L   M +  ++P+  TY+ L++G C+ G   +A+  V
Sbjct: 652  DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG---KAVTAV 708

Query: 69   DL----MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             L    M +    P+   Y  L++G   AG  + AF   +EM      PD V +N +I+ 
Sbjct: 709  CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 768

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                G+ M+A      +   G+ PN  T+NI++  + K+  + +   +   M   G  PD
Sbjct: 769  CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 828

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +T+++LI    K+G  +   +++  M  +G   +  T N +++      K+ +A+ L+N
Sbjct: 829  KLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 888

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +  G + D  +Y  +  G  +      +  +  EM E  ++P    Y  +I G+ + G
Sbjct: 889  FMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVG 948

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              + A  + +E+   G    E   + ++ G    G+ E A+   + M+     P I T  
Sbjct: 949  DIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFT 1008

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L+   CR+  + +ALK      L G  +D V YN LI  +C       AF L  EM  +
Sbjct: 1009 TLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHR 1068

Query: 425  KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
             L P+  TYA +  A+  +  L + +K  + + E G I+
Sbjct: 1069 DLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1107



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 1/421 (0%)

Query: 7    LPDNVTYNTILDALFKKGK-LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            LPD+ TY+++L  L +KGK +  V    + M +  L PN   Y  LV G  K G  K A 
Sbjct: 685  LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 744

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
               + M +  + PD   +N +I+     G + +A      M    + P++ TYN L++ F
Sbjct: 745  YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 804

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +    +    L   +   GI P+ +T + +I    K G  D   K++  M   G   D 
Sbjct: 805  SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ 864

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             T+N LI+   ++G M +AF +++ M   G+  +  T N I + L  +    E+ ++L+ 
Sbjct: 865  FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 924

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              + G       Y TLI G  R      A KL DEM+           +AM+ GL   GK
Sbjct: 925  MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            TE A+ +L+ +L+  ++P   TF T++H FC + ++ +AL+    M     K D+V  N+
Sbjct: 985  TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1044

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            L+ G+C  G    A + +     +    +  TY  L+ ++     L     LL++++E+ 
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104

Query: 426  L 426
            L
Sbjct: 1105 L 1105



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 35/353 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD V +N I+D+  ++G++ +  D  S M+  G+ PN  TYNIL+ G+ K   L   
Sbjct: 754  GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 813

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +   M +    PD  T++ LI G   +G+ +   +L  +M     L D  T+N LIN+
Sbjct: 814  LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINK 873

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            + ESG+  +AF L++ ++  G+ P+  T+N +     K+    ++  ++  M ENG  P 
Sbjct: 874  YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 933

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKG----------------------------- 215
               Y TLI+  C+ G+++ AF++ D M   G                             
Sbjct: 934  HAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 993

Query: 216  --LKMNTI----TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
              L+M  +    T  T++H  C + K+ EA  L       G  LD V+Y  LI G   + 
Sbjct: 994  HMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANG 1053

Query: 270  KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
             +  A +L++EM+ R + P+  TY  ++  +S +    Q   +L +L + G+I
Sbjct: 1054 DSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 167/536 (31%), Positives = 275/536 (51%), Gaps = 18/536 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD  T   +  A  + G++ +  + + +M+  GL  N   Y+ ++  YC +GW ++A
Sbjct: 213 GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDA 272

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLIN 123
            R+++ + +    P+V TY +L+ G+C  G +EEA R+ KEM E+  ++ D V Y  +IN
Sbjct: 273 RRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMIN 332

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + GR  +A ++ +E+ + GI  N   +N MI   CK G++++  K+++ ME+ G  P
Sbjct: 333 GYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRP 392

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  +YNTLID  C+ G+M +AF M  +M R GL   T+T NT+L   C    +D+A  L 
Sbjct: 393 DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               KRG   +E+S  TL+ G F+  K  +AL LW E   R +  +  T+N +I GL + 
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A ++L+ + +    PD  T+ T+  G+C  GQ+  A    NKM    F P +   
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N  ++G        K          +G + + VTY  LI+  CKE  L +A  L  EM  
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEA----QKFTSI---------MVETGKINHQVVQPN 470
             + P+ +  +A+ +   + G+++EA    QK  +I          +E  KI+H VV   
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH-VVDTI 691

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
               P     +++ ++  I   C  GR  DA  +FE  R K    +  TY +L++G
Sbjct: 692 ADGNPHS---ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHG 744



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 174/656 (26%), Positives = 296/656 (45%), Gaps = 117/656 (17%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G   + V Y+ ++D     G   + R +L  ++++GL PN  TY +LV GYCK G 
Sbjct: 244 MEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR 303

Query: 61  LKEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           ++EA RVV  M +   +  D   Y M+ING+C  G +++A R+R EM    +  ++  YN
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN   + GR  E  K++ E+++ G++P+  ++N +I  YC+EG + KA ++ R M  N
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423

Query: 180 GFSPDCVTYNTLIDANC-----------------------------------KAGNMEEA 204
           G +   +TYNTL+   C                                   KAG  E+A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +      +GL  N IT NT+++ LC   ++ EA  LL+   +     D ++Y TL  G
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           Y +  +   A  L ++M+     PS   +N+ I G   + +  +  D+ +E+   G+ P+
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPN 603

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA----L 380
             T+  +I G+C EG + +A   + +MV     P++  C+ L+S   +EG +++A     
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 381 KFFRSWILKGKAVDS----------------------VTYNTLISSLCKERRLEDAFGLL 418
           K     ++ G ++ +                      V +N +I  LCK  R+ DA  L 
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG------------------ 460
             +  K+  PD +TY+++      SG ++EA     +M+  G                  
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 461 -----------KINHQVVQPNT-------------SKTPEE-----------IDPSSISY 485
                      K+  + + PN               KT E            I P+ I+Y
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITY 843

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK--RRKSISKAVD 539
           S  I   C+QG  ++A+++ ++  +  +  N  TY  L++G IK    + ISK  D
Sbjct: 844 SILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 899



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 229/453 (50%), Gaps = 26/453 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++ +T+LD LFK GK  +  +L  +   +GL  N  T+N +++G CK+G + EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D M + +  PD  TY  L +G+C  G L  A  L  +ME L   P V  +N+ I  
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F + +  +   +  E+   G+ PN VT+  +I  +CKEG + +AC +   M  NG +P+
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638

Query: 185 CVTYNTLIDANCKAGNMEEA----FRMMDVMGRKGLKMNTITLNTILHT----------- 229
               + L+    K G ++EA     +++++    G  ++TI ++ I H            
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698

Query: 230 -----------LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
                      LC   ++ +A  L  S   + +  D  +Y +LI G       + A  L 
Sbjct: 699 ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           D M    + P+  TYN++I+GL +SGK  +A+++ N+L   G+ P+  T+NT+I  +C E
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+  +A +   KMVE+  +P ++T +IL+ GLC +G +E+A+K     I      + +TY
Sbjct: 819 GKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITY 878

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
            TLI    K   +E+   L  EM  + L P  +
Sbjct: 879 CTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 261/581 (44%), Gaps = 80/581 (13%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWLKEAM 65
           P  V++  +L  L +  + ++ R LLS +      L P+                L E  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPH----------------LAEVY 141

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R               ++++L+    +AG L  A  +   M  +   P + + N L+N+ 
Sbjct: 142 RDFTF--------SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +SG    A  +  ++   G+ P+  T  IM K YC++G++ +A + V  ME  G   + 
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ ++D  C  G  E+A R+++ + RKGL  N +T   ++   C + +++EA  ++  
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 246 ASKRG-YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + G   +DEV+YG +I GY +  + + A ++ +EM++  I  + F YN MI GL + G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV------------ 352
           + E+   +L E+   GM PD+ ++NT+I G+C EG + KA +    MV            
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 353 -----------------------EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
                                  ++   P+ ++C+ LL GL + G  E+AL  ++  + +
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G A + +T+NT+I+ LCK  R+ +A  LL  M+E +  PD  TY  +     + G+L  A
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553

Query: 450 QKFTSIMVETG------------------KINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
               + M   G                  K  H+V   ++  +   + P+ ++Y   I  
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAG 613

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C +G   +A  ++ E    G+  N      LM+   K  K
Sbjct: 614 WCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 193/384 (50%), Gaps = 26/384 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C PD++TY T+ D   K G+L     L++ M+  G  P+   +N  ++G+     
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   +   M+     P++ TY  LI GWC  G L EA  L  EM +  + P+V   + 
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKP---------NAVTH-----------------N 154
           L++ F++ G+  EA  ++ +L    + P         + ++H                 N
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           ++I   CK G+I  A  +  ++    F PD  TY++LI     +G+++EAF + DVM   
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           GL  N IT N++++ LC   KL  A  L N    +G   + ++Y TLI  Y ++ K   A
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            KL  +M E  I P+  TY+ +I+GL   G  E+AI +L++++++ + P+  T+ T+IHG
Sbjct: 825 FKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884

Query: 335 FCSEGQVEKALQFHNKMVEKSFKP 358
           +   G +E+  + +++M  +   P
Sbjct: 885 YIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 157/320 (49%), Gaps = 26/320 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY  ++    K+G L+E  +L  +M   G+ PN    + L+S + K G 
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654

Query: 61  LKEA--------------------------MRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
           + EA                            VVD +           +N++I G C +G
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
            + +A  L + + + + LPD  TY++LI+    SG   EAF L D +   G+ PN +T+N
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYN 774

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            +I   CK GK+ +A  +   ++  G SP+ +TYNTLID  CK G   EAF++   M  +
Sbjct: 775 SLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE 834

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G++   IT + +++ LC +  ++EA  LL+   +     + ++Y TLI GY +       
Sbjct: 835 GIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 894

Query: 275 LKLWDEMKERQIMPSTFTYN 294
            KL+DEM  R ++P+ +  N
Sbjct: 895 SKLYDEMHIRGLLPTNWIGN 914



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 191/422 (45%), Gaps = 40/422 (9%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P +V++  L++    + R  +A  L+  L  H                  E       ++
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHA-----------------EPLFPHLAEV 140

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
            R+     F+   V+++ L+ A+  AG +  A  + D MG+ G + +  + N +L+ L  
Sbjct: 141 YRD-----FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQ 195

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
                 A M+       G   DE +   +   Y RD +  +A++  +EM+   +  +   
Sbjct: 196 SGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA 255

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y+A++      G TE A  +L  L + G+ P+  T+  ++ G+C +G++E+A +   +M 
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315

Query: 353 EKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           E      D V   ++++G C+ G ++ A +        G  V+   YNT+I+ LCK  R+
Sbjct: 316 ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRM 375

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           E+   +L EME+  + PD+Y+Y  +       G + +A +   +MV  G           
Sbjct: 376 EEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG----------- 424

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 +  ++++Y+  +   CS     DAL+++    ++G+A N+ +   L++GL K  
Sbjct: 425 ------LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAG 478

Query: 532 KS 533
           K+
Sbjct: 479 KT 480



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 32/328 (9%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASK-------------RGYYLDEVSYGTLITGYFRDEKAN 272
           +LH L   ++  +A  LL+S                R +    VS+  L+  +    + +
Sbjct: 106 LLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLS 165

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            AL ++D M +    PS  + N ++  L QSG    A  +  ++  +G++PDE T   + 
Sbjct: 166 SALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMA 225

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
             +C +G+V +A++F  +M     + ++V  + ++   C  G  E A +   S   KG +
Sbjct: 226 KAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLS 285

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KLGPDRYTYAAIHTALVESGRLEEAQK 451
            + VTY  L+   CK+ R+E+A  ++ EM+E   +  D   Y  +     + GR+++A +
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             + M + G                 I  +   Y+  IN  C  GR ++  ++ +E    
Sbjct: 346 VRNEMRDAG-----------------IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388

Query: 512 GIAINKSTYMNLMNGLIKRRKSISKAVD 539
           G+  +K +Y  L++G   R  S+ KA +
Sbjct: 389 GMRPDKYSYNTLIDGYC-REGSMRKAFE 415


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 167/536 (31%), Positives = 275/536 (51%), Gaps = 18/536 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD  T   +  A  + G++ +  + + +M+  GL  N   Y+ ++  YC +GW ++A
Sbjct: 213 GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDA 272

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLIN 123
            R+++ + +    P+V TY +L+ G+C  G +EEA R+ KEM E+  ++ D V Y  +IN
Sbjct: 273 RRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMIN 332

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + GR  +A ++ +E+ + GI  N   +N MI   CK G++++  K+++ ME+ G  P
Sbjct: 333 GYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRP 392

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  +YNTLID  C+ G+M +AF M  +M R GL   T+T NT+L   C    +D+A  L 
Sbjct: 393 DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               KRG   +E+S  TL+ G F+  K  +AL LW E   R +  +  T+N +I GL + 
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A ++L+ + +    PD  T+ T+  G+C  GQ+  A    NKM    F P +   
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N  ++G        K          +G + + VTY  LI+  CKE  L +A  L  EM  
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEA----QKFTSI---------MVETGKINHQVVQPN 470
             + P+ +  +A+ +   + G+++EA    QK  +I          +E  KI+H VV   
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH-VVDTI 691

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
               P     +++ ++  I   C  GR  DA  +FE  R K    +  TY +L++G
Sbjct: 692 ADGNPHS---ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHG 744



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 260/534 (48%), Gaps = 39/534 (7%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YNT+++ L K G++ EV+ +L +M+  G+ P++ +YN L+ GYC+ G +++A  +  +M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N       TYN L+ G+C+   +++A RL   M    + P+ ++ +TL++  F++G++
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A  L  E    G+  N +T N +I   CK G++ +A +++  M+E    PD +TY TL
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
            D  CK G +  A  +M+ M   G   +    N+ +      K+  +   + +  S RG 
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + V+YG LI G+ ++   + A  L+ EM    + P+ F  +A++    + GK ++A  
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 312 MLNELLQSGMIPD--------------------------ETTFNTIIHGFCSEGQVEKAL 345
           +L +L+   MIP                              +N II G C  G++  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
                +  K F PD  T + L+ G    G +++A       +  G   + +TYN+LI  L
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----- 460
           CK  +L  A  L ++++ K + P+  TY  +     + G+  EA K    MVE G     
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEA 840

Query: 461 -KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            K+  Q+++ N       +DP+ I+Y   I+ +   G  ++  ++++E   +G+
Sbjct: 841 IKLLDQMIENN-------VDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGL 887



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 261/581 (44%), Gaps = 80/581 (13%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWLKEAM 65
           P  V++  +L  L +  + ++ R LLS +      L P+                L E  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPH----------------LAEVY 141

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R               ++++L+    +AG L  A  +   M  +   P + + N L+N+ 
Sbjct: 142 RDFTF--------SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +SG    A  +  ++   G+ P+  T  IM K YC++G++ +A + V  ME  G   + 
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ ++D  C  G  E+A R+++ + RKGL  N +T   ++   C + +++EA  ++  
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 246 ASKRG-YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + G   +DEV+YG +I GY +  + + A ++ +EM++  I  + F YN MI GL + G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV------------ 352
           + E+   +L E+   GM PD+ ++NT+I G+C EG + KA +    MV            
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 353 -----------------------EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
                                  ++   P+ ++C+ LL GL + G  E+AL  ++  + +
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G A + +T+NT+I+ LCK  R+ +A  LL  M+E +  PD  TY  +     + G+L  A
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553

Query: 450 QKFTSIMVETG------------------KINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
               + M   G                  K  H+V   ++  +   + P+ ++Y   I  
Sbjct: 554 THLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAG 613

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C +G   +A  ++ E    G+  N      LM+   K  K
Sbjct: 614 WCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 198/431 (45%), Gaps = 77/431 (17%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++ +T+LD LFK GK  +  +L  +   +GL  N  T+N +++G CK+G + EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-------------- 110
             ++D M + +  PD  TY  L +G+C  G L  A  L  +ME L               
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578

Query: 111 ---------------------LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                                L P++VTY  LI  + + G   EA  L  E+  +G+ PN
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC------------------------ 185
               + ++  + KEGK+D+A  +++ +      P C                        
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698

Query: 186 --VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             V +N +I   CK+G + +A  + + +  K    +  T ++++H       +DEA+ L 
Sbjct: 699 ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +     G   + ++Y +LI G  +  K +RA+ L+++++ + I P+  TYN +I    + 
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818

Query: 304 GKT----------------EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           GKT                E+AI +L++++++ + P+  T+ T+IHG+   G +E+  + 
Sbjct: 819 GKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 878

Query: 348 HNKMVEKSFKP 358
           +++M  +   P
Sbjct: 879 YDEMHIRGLLP 889



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 45/320 (14%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY  ++    K+G L+E  +L  +M   G+ PN    + L+S + K G 
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654

Query: 61  LKEA--------------------------MRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
           + EA                            VVD +           +N++I G C +G
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
            + +A  L + + + + LPD  TY++LI+    SG   EAF L D +   G+ PN +T+N
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYN 774

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            +I   CK GK+ +A  +   ++  G SP+ +TYNTLID  CK G   EAF++   M  +
Sbjct: 775 SLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE 834

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G                    ++EA  LL+   +     + ++Y TLI GY +       
Sbjct: 835 GY-------------------MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 875

Query: 275 LKLWDEMKERQIMPSTFTYN 294
            KL+DEM  R ++P+ +  N
Sbjct: 876 SKLYDEMHIRGLLPTNWIGN 895



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 191/422 (45%), Gaps = 40/422 (9%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P +V++  L++    + R  +A  L+  L  H                  E       ++
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHA-----------------EPLFPHLAEV 140

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
            R+     F+   V+++ L+ A+  AG +  A  + D MG+ G + +  + N +L+ L  
Sbjct: 141 YRD-----FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQ 195

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
                 A M+       G   DE +   +   Y RD +  +A++  +EM+   +  +   
Sbjct: 196 SGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA 255

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y+A++      G TE A  +L  L + G+ P+  T+  ++ G+C +G++E+A +   +M 
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315

Query: 353 EKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           E      D V   ++++G C+ G ++ A +        G  V+   YNT+I+ LCK  R+
Sbjct: 316 ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRM 375

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           E+   +L EME+  + PD+Y+Y  +       G + +A +   +MV  G           
Sbjct: 376 EEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG----------- 424

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 +  ++++Y+  +   CS     DAL+++    ++G+A N+ +   L++GL K  
Sbjct: 425 ------LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAG 478

Query: 532 KS 533
           K+
Sbjct: 479 KT 480



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 32/328 (9%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASK-------------RGYYLDEVSYGTLITGYFRDEKAN 272
           +LH L   ++  +A  LL+S                R +    VS+  L+  +    + +
Sbjct: 106 LLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLS 165

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            AL ++D M +    PS  + N ++  L QSG    A  +  ++  +G++PDE T   + 
Sbjct: 166 SALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMA 225

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
             +C +G+V +A++F  +M     + ++V  + ++   C  G  E A +   S   KG +
Sbjct: 226 KAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLS 285

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KLGPDRYTYAAIHTALVESGRLEEAQK 451
            + VTY  L+   CK+ R+E+A  ++ EM+E   +  D   Y  +     + GR+++A +
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             + M + G                 I  +   Y+  IN  C  GR ++  ++ +E    
Sbjct: 346 VRNEMRDAG-----------------IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388

Query: 512 GIAINKSTYMNLMNGLIKRRKSISKAVD 539
           G+  +K +Y  L++G   R  S+ KA +
Sbjct: 389 GMRPDKYSYNTLIDGYC-REGSMRKAFE 415


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 271/531 (51%), Gaps = 39/531 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN ++      G L        +M++ G +PN  TYN ++  YCKL  + EA
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++ LM      P++ +YN++ING C  G ++E   + +EM   + +PD VT+NTLIN 
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A  L  E+ ++G+ PN VT+  +I   CK G +++A + +  M + G  P+
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TLID   + G +++A+++M  M   G     IT N +++  C   ++++A  LL 
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG+  D VSY T+I+G+ R+++  +A +L  EM  + I P   TY+++I GL +  
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +  D+  E+L  G+ PDE T+ ++I+ +C EG ++KAL+ H++M++K F PDIVT N
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYN 557

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++G  ++   ++A +     + +    + +TYNTLI + C     + A  L+      
Sbjct: 558 VLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALMK----- 611

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPEEIDPSSI 483
                              G + EA +    M++ G K+N +V                 
Sbjct: 612 --------------GFCMKGLMNEADRVLESMLQKGYKLNEEV----------------- 640

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Y+  I+ H   G  + A  +++E    G A +  T M L   L    K +
Sbjct: 641 -YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEV 690



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 274/539 (50%), Gaps = 33/539 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW-LK 62
           + C   +  ++ ++ +  +   +N+   +++  K  G +P   +YN ++    +    +K
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK 185

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A  +   M ++   P+V+TYN+LI G+C AG LE       EME    LP+VVTYNT+I
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTII 245

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + + +  +  EAFKL+  +   G+ PN +++N++I   C+EG++ +  +I+  M +  + 
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT+NTLI+  C  GN  +A  +   M + GL  N +T  T+++++C    L+ A   
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+    RG + +  +Y TLI G+ +     +A ++  EM E    P+  TYNA+I G   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ E A  +L E+++ G IPD  +++TII GFC   ++EKA Q   +MV K   PD+ T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + L+ GLC++  L +    F+  +  G   D VTY +LI++ C E  L+ A  L  EM 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +K   PD  TY  +     +  R +EA++    ++                  EE  P+ 
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY-----------------EESVPNE 588

Query: 483 ISYSEKINE---------------HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           I+Y+  I+                 C +G   +A ++ E   QKG  +N+  Y  +++G
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 254/477 (53%), Gaps = 15/477 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+ VTYNTI+DA  K  K+ E   LL  M  +GL PN  +YN++++G C+ G 
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE   +++ M++ + +PD  T+N LING+CN G   +A  L  EM    L P+VVTY T
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   ++G    A + +D++ + G+ PN  T+  +I  + ++G + +A +I++ M ENG
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P  +TYN LI+ +C  G ME+A  ++  M  +G   + ++ +TI+   C  ++L++A+
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +G   D  +Y +LI G  +  +      L+ EM    + P   TY ++I   
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  ++A+ + +E++Q G  PD  T+N +I+GF  + + ++A +   K++ +   P+ 
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588

Query: 361 VT-------CN--------ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +T       CN         L+ G C +G++ +A +   S + KG  ++   YN +I   
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGH 648

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            K   +E A+ L  EM      P   T  A+  +L   G+  E  +     +++ +I
Sbjct: 649 SKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRI 705



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 242/453 (53%), Gaps = 18/453 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME-AFKLIDE 140
            +++++       ++ +A  +    +S   +P V++YN +++    + +S++ A  +  E
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E G+ PN  T+NI+I+ +C  G ++        ME NG  P+ VTYNT+IDA CK   
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + EAF+++ +M  KGL  N I+ N +++ LC E ++ E   +L   SKR Y  D V++ T
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI GY      ++AL L  EM +  + P+  TY  +I  + ++G   +A++ L+++   G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+  T+ T+I GF  +G +++A Q   +MVE  F P I+T N L++G C  G +E A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
              +  I +G   D V+Y+T+IS  C+ + LE AF L  EM  K + PD  TY+++   L
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            +  RL E       M+  G                 + P  ++Y+  IN +C +G    
Sbjct: 494 CKQRRLGEVCDLFQEMLSLG-----------------LPPDEVTYTSLINAYCIEGDLDK 536

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           AL++ +E  QKG + +  TY  L+NG  K+ ++
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 202/401 (50%), Gaps = 15/401 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY T+++++ K G LN   + L  M+ +GL PN  TY  L+ G+ + G+LK+A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +N   P + TYN LING C  G +E+A  L +EM     +PDVV+Y+T+I+ 
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +    +AF+L  E+   GI P+  T++ +I+  CK+ ++ + C + + M   G  PD
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY +LI+A C  G++++A R+ D M +KG   + +T N +++    + +  EA  LL 
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 245 SASKRGYYLDEVSYGTLI---------------TGYFRDEKANRALKLWDEMKERQIMPS 289
                    +E++Y TLI                G+      N A ++ + M ++    +
Sbjct: 578 KLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLN 637

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
              YN +I G S+ G  E+A ++  E+L SG  P   T   +      EG+  +  Q  +
Sbjct: 638 EEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
             ++     +     +L+    +EG ++      +   L G
Sbjct: 698 YTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSG 738


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 276/537 (51%), Gaps = 25/537 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD    + ++D   ++G ++EV  +   M   G+  N  TYN+L+ G CK G 
Sbjct: 36  MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  ++  M      P+  T+ +LI G+C    +  A  L  EME   L+P  V+Y  
Sbjct: 96  MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN          A KL++++   G+KPN V ++ +I  Y  EG+I++A +++  M  +G
Sbjct: 156 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFR-MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            +PD   YN +I    KAG MEEA   ++++ GR GLK + +T    +       K+ EA
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR-GLKPDAVTFGAFILGYSKTGKMTEA 274

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               +     G   +   Y  LI G+F+      AL ++  +    ++P   T +A I G
Sbjct: 275 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 334

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+ ++A+ + +EL + G++PD  T++++I GFC +G+VEKA + H++M  K   P+
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   N L+ GLC+ G +++A K F     KG   DSVTY+T+I   CK   + +AF L  
Sbjct: 395 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 454

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG------------------K 461
           EM  K + P  + Y A+     + G +E+A      M++ G                  K
Sbjct: 455 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK 514

Query: 462 INH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           I    Q+ Q   +K   +I P  ++Y+  I+ HC  G+ ++A  +F+E +++ + ++
Sbjct: 515 IQEASQLFQEMIAK---QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 568



 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 283/534 (52%), Gaps = 2/534 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            GC P++ T+  +++   ++  +    +LL +M+K+ LVP+  +Y  +++G C    L  
Sbjct: 109 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 168

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A ++++ MT +   P+V  Y+ LI G+ + G +EEA RL   M    + PD+  YN +I+
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 228

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G+  EA   + E+   G+KP+AVT    I  Y K GK+ +A K    M ++G  P
Sbjct: 229 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 288

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +   Y  LI+ + KAGN+ EA  +   +   G+  +  T +  +H L    ++ EA  + 
Sbjct: 289 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 348

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   ++G   D  +Y +LI+G+ +  +  +A +L DEM  + I P+ F YNA++ GL +S
Sbjct: 349 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 408

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A  + + + + G+ PD  T++T+I G+C    V +A    ++M  K  +P     
Sbjct: 409 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 468

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ G C+EG +EKA+  FR  + KG A  ++++NTLI   CK  ++++A  L  EM  
Sbjct: 469 NALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIA 527

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           K++ PD  TY  +     ++G++EEA      M E   I   V         + + P  +
Sbjct: 528 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEV 587

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +Y   I  HC +    +A ++ +E   KG+ + K T  +L+   + +R+ +++A
Sbjct: 588 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGM-LTKGTIHDLLITALCKREDLTEA 640



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/582 (28%), Positives = 267/582 (45%), Gaps = 78/582 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME    +P  V+Y  +++ L     L+    LL  M   GL PN   Y+ L+ GY   G 
Sbjct: 141 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R++D M+ +   PD++ YN +I+    AG +EEA     E++   L PD VT+  
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY-------------------- 160
            I  + ++G+  EA K  DE+ +HG+ PN   + ++I  +                    
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320

Query: 161 ---------------CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                           K G++ +A K+   ++E G  PD  TY++LI   CK G +E+AF
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M  KG+  N    N ++  LC    +  A  L +   ++G   D V+Y T+I GY
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 440

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            + E    A  L+ EM  + + P +F YNA++ G  + G  E+A+++  E+LQ G     
Sbjct: 441 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATT 499

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA------ 379
            +FNT+I G+C   ++++A Q   +M+ K   PD VT   ++   C+ G +E+A      
Sbjct: 500 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 559

Query: 380 -----------LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
                         F   + KG   D VTY  +I + CKE  L +AF L  E+    +G 
Sbjct: 560 MQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV----VGK 615

Query: 429 DRYTYAAIH----TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              T   IH    TAL +   L EA K    M E G                 + PS  +
Sbjct: 616 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG-----------------LKPSLAA 658

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            S  +      G+  +A ++FE  +  G+  + +T ++L+NG
Sbjct: 659 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 196/403 (48%), Gaps = 51/403 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +   G LPD  T +  +  L K G++ E   + S++K++GLVP+  TY+ L+SG+CK G 
Sbjct: 316 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 375

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  + D M      P+++ YN L++G C +G ++ A +L   M    L PD VTY+T
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + +S    EAF L  E+   G++P++  +N ++   CKEG ++KA  + R M + G
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495

Query: 181 FS----------------------------------PDCVTYNTLIDANCKAGNMEEA-- 204
           F+                                  PD VTY T+ID +CKAG MEEA  
Sbjct: 496 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555

Query: 205 ---------------FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
                          F + + M  KG+K + +T   +++  C E  L EA+ L +    +
Sbjct: 556 LFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 615

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G       +  LIT   + E    A KL DEM E  + PS    + ++    ++GK ++A
Sbjct: 616 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 675

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
             +   +   G++PD TT   +++G  ++   E A     ++V
Sbjct: 676 TRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 277/525 (52%), Gaps = 5/525 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY--CKLGWL 61
           F C   +  ++ ++ +      + +  +++   K  G +P   +YN ++     C+   +
Sbjct: 126 FMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI 185

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
                  +++    SL +V++YN+LI G+C AG LE   R  +EME  + LP+VVTYNT+
Sbjct: 186 FAEKVYREMIASGVSL-NVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTV 244

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  + +  R  EAFKL+  +   G++PN +T+N++I   C+ G+I++   ++  M+  GF
Sbjct: 245 IGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGF 304

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD VTYNTL++  CK GN  +A  +   M R GL  + +T  ++++T+C    L+ A  
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
             +    RG   + V+Y +LI G+ +    + A ++WDEM      P+  TYNA++ G  
Sbjct: 365 FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            SG+ E+AI +L  +   G+ PD  +++TII GFC   ++++A Q + +MVEK   PD +
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T + L+ GLC +  L +A   F+  + K    D  TY +LI+  CKE  L +A  L  EM
Sbjct: 485 TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +K   PD  TY  +   L +  R  EA++    +     I + +      ++  +I+  
Sbjct: 545 IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFK 604

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           S+     I   C +G   +A Q+FE   ++    N++ Y  +++G
Sbjct: 605 SV--VALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHG 647



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 156/513 (30%), Positives = 257/513 (50%), Gaps = 51/513 (9%)

Query: 5   GCLPDNVTYNTILDALFK-KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G +P  ++YN ILD++ + +  +     +  +M   G+  N  +YNIL+ G+C  G L+ 
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            +R  + M +N+ LP+V TYN +I  +C    ++EAF+L + M    L P+++TYN +IN
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                GR  E   ++ E+D  G  P+ VT+N ++  YCK G   +A  +   M  NG  P
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341

Query: 184 DCVTYNTLIDANCKAGN-----------------------------------MEEAFRMM 208
           D VTY +LI+  CKAGN                                   M+EA+R+ 
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M R G     +T N +L+  C   +++EA  LL     +G   D VSY T+I G+ R 
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRY 461

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           ++ +RA ++  EM E+ + P   TY+++I GL +  +  +A D+  E+L   ++PDE T+
Sbjct: 462 QELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTY 521

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            ++I+G+C EG + +AL  H++M++K F PD VT N+L++GL ++    +A +       
Sbjct: 522 TSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFY 581

Query: 389 KGKAVDSVTYNTLISS---------------LCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
                + +TY+TLI S                C +  + +A  +   M ++   P+   Y
Sbjct: 582 DESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVY 641

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
             I       G + +A K    MV+ G I H V
Sbjct: 642 NVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTV 674



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 246/463 (53%), Gaps = 15/463 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   CLP+ VTYNT++ A  K  +++E   LL  M  +GL PN  TYN++++G C++G 
Sbjct: 229 MERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGR 288

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++E   V+  M +    PD  TYN L+NG+C  G   +A  L  EM    L PDVVTY +
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   ++G    A +  D++   G++PN VT+  +I  + ++G +D+A +I   M  +G
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P  VTYN L++ +C +G MEEA  ++  M  KGL  + ++ +TI+   C  ++LD A+
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     ++G   D ++Y +LI G     + N A  L+ EM  + ++P  FTY ++I G 
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A+++ +E+++ G +PD  T+N +I+G   + +  +A +   K+      P+ 
Sbjct: 529 CKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588

Query: 361 VTCNILLS---------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +T + L+                G C +G++ +A + F S I + +  +   YN +I   
Sbjct: 589 ITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGH 648

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           C++  +  A  L  EM +    P   T  A+  AL   G  E+
Sbjct: 649 CRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQ 691



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 239/474 (50%), Gaps = 50/474 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +TYN +++ L + G++ E   +L++M ++G  P+  TYN LV+GYCK+G   +A
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M +N   PDV TY  LIN  C AG L  A     +M    L P+ VTY +LIN 
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G   EA+++ DE+   G  P  VT+N ++  +C  G++++A  ++R ME  G SPD
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+Y+T+I   C+   ++ AF+M   M  KG+  + IT ++++  LC +++L+EA  L  
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQ 507

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +    DE +Y +LI GY ++   N AL L DEM ++  +P T TYN +I GL++  
Sbjct: 508 EMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQA 567

Query: 305 KTEQAIDML-----NELLQSGMI------------------------------------- 322
           +T +A  +L     +E + +G+                                      
Sbjct: 568 RTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFE 627

Query: 323 --------PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
                   P+E  +N IIHG C +G V KA + + +MV+  F P  VT   L+  L  EG
Sbjct: 628 SMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           + E+     R  +   K  D+     L+    KE  ++  F LL+EM +    P
Sbjct: 688 MDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 252/488 (51%), Gaps = 51/488 (10%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
             ++++V     L ++++A+ +VDL   N  +P V +YN          +L+   R RK 
Sbjct: 133 AVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYN---------AILDSIVRCRKP 183

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           +                         + A K+  E+   G+  N  ++NI+I+ +C  G 
Sbjct: 184 V-------------------------IFAEKVYREMIASGVSLNVFSYNILIRGFCAAGN 218

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           ++   +    ME N   P+ VTYNT+I A CK   ++EAF+++  MG +GL+ N +T N 
Sbjct: 219 LEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNM 278

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +++ LC   +++E   +L    ++G+  D V+Y TL+ GY +    ++AL L  EM    
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           + P   TY ++I  + ++G   +A++  +++   G+ P+  T+ ++I+GF  +G +++A 
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  ++M+   F P IVT N LL+G C  G +E+A+   R    KG + D V+Y+T+I+  
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C+ + L+ AF + +EM EK + PD  TY+++   L E  RL EA      M+        
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML-------- 510

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
               N S  P+E      +Y+  IN +C +G   +AL + +E  +KG   +  TY  L+N
Sbjct: 511 ----NKSLLPDEF-----TYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLIN 561

Query: 526 GLIKRRKS 533
           GL K+ ++
Sbjct: 562 GLNKQART 569



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 148/305 (48%), Gaps = 17/305 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  PD V+Y+TI+    +  +L+    + ++M ++G+ P+  TY+ L+ G C+   
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +   M     LPD +TY  LING+C  G L EA  L  EM     LPD VTYN 
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI---------------KWYCKEGK 165
           LIN   +  R+ EA +L+ +L      PN +T++ +I               K +C +G 
Sbjct: 559 LINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGL 618

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +++A ++  +M +    P+   YN +I  +C+ GN+ +A ++   M   G   +T+T+  
Sbjct: 619 MNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIA 678

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG-TLITGYFRDEKANRALKLWDEMKER 284
           ++  L  E  +DE   L+     R   L +      L+    ++   +    L  EM + 
Sbjct: 679 LVKALYSE-GMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKD 737

Query: 285 QIMPS 289
             +PS
Sbjct: 738 GFLPS 742


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 150/443 (33%), Positives = 251/443 (56%), Gaps = 7/443 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN +L  L   G++++ + L   M K G  P+  TYN L+ G+CK+G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+++ D   +   +PDV TYN LING+C A  L+EA R+ + M S  L+PDVVTYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-IDKACKIVRNMEEN 179
           L+N   ++GR  EA  LI    + G  PN +T++ +I   C+E + + +A K+  ++ + 
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G+ P+  TYN LID   K   + EAF +   + + GL+ + IT    +  LC   ++++A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            ++L    ++G   D VS+  +I G  ++++ + A  L   M+ +   P+  ++N +I G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC---SEGQVEKALQFHNKMVEKSF 356
             ++GK ++A+    E+L+ G+ P   T+N ++ G C    EG++++A+   + M+EK  
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            PD+VT + L+ GL + G L+ A +   +   KG   +  TYN+LIS LC   ++++A  
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 417 LLSEMEEKKLGPDRYTYAAIHTA 439
           L   M EK   PD  TY  I +A
Sbjct: 418 LFVAMVEKGCVPDTITYGTIISA 440



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 245/435 (56%), Gaps = 7/435 (1%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M+K G  PNR TYN L+SG C  G + +A  + + M +    PDV TYN L++G+C  G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L+EA ++         +PDVVTYN LIN F ++ +  EA +++  +    + P+ VT+N 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA-GNMEEAFRMMDVMGRK 214
           ++   CK G++D+A  ++    + GFSP+ +TY+TLI   C+    + EA ++   + ++
Sbjct: 121 LVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G +    T N ++  L  E +++EA+ L +   K G   D ++Y   I G  +  +   A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           L +  +M E+  +P   ++NA+I GL +  + ++A  +L+ +   G  P+  +FNT+I G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR---EGILEKALKFFRSWILKGK 391
            C  G+ +KA+    +M+++  KP +VT NIL+ GLC+   EG +++A+  F + I KG+
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VTY+ LI  L K  +L+DA  LL  ME K   P+ YTY ++ + L    +++EA +
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 452 FTSIMVETGKINHQV 466
               MVE G +   +
Sbjct: 418 LFVAMVEKGCVPDTI 432



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/459 (32%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M ++   P+  TYN L++G CN G + +A  L + M      PDVVTYNTL++ F + G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA K+ D   + G  P+ VT+N +I  +CK  K+D+A +I++ M      PD VTYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE-KKLDEAYMLLNSASKR 249
           L++  CK G ++EA RM+ V   KG   N IT +T++  LC E + + EA  L  S  K+
Sbjct: 121 LVNGLCKNGRVDEA-RMLIV--DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           GY  +  +Y  LI G  ++++ N A +L+  + +  + P   TY   I GL ++G+ E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           + ML ++ + G +PD  + N +I+G C E +V++A    + M  K   P+ ++ N L+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER---RLEDAFGLLSEMEEKKL 426
            CR G  +KA+  F+  + +G     VTYN L+  LCK R   R+++A  L   M EK  
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY+A+   L ++G+L++A++    M   G I                 P+  +Y+
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI-----------------PNVYTYN 400

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             I+  C   +  +AL++F    +KG   +  TY  +++
Sbjct: 401 SLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 204/394 (51%), Gaps = 24/394 (6%)

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           +HG  PN +T+N ++   C  G++  A  +   M + G+SPD VTYNTL+   CK G ++
Sbjct: 3   KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           EA ++ D   ++G   + +T N +++  C   KLDEA  +L          D V+Y +L+
Sbjct: 63  EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK-TEQAIDMLNELLQSGM 321
            G  ++ + + A  L   + ++   P+  TY+ +I GL +  +   +A+ +   +L+ G 
Sbjct: 123 NGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+  T+N +I G   E +V +A +  + +V+   +PD +T  + + GLC+ G +E AL 
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             +    KG   D V++N +I+ LCKE+R+++A  LLS ME K   P+  ++  +     
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC---SQGRY 498
            +G+ ++A      M++ G                 + P+ ++Y+  ++  C    +GR 
Sbjct: 300 RAGKWKKAMTTFKEMLKRG-----------------VKPTVVTYNILVDGLCKARQEGRI 342

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           K+A+ +F+   +KG   +  TY  L++GL K  K
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 376



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 20/188 (10%)

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M +  F P+ +T N LLSGLC  G +  A   +   I  G + D VTYNTL+   CK   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  +     ++   PD  TY A+     ++ +L+EAQ+    MV             
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS------------ 108

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                E + P  ++Y+  +N  C  GR  +A  +  +   KG + N  TY  L++GL + 
Sbjct: 109 -----ENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRE 160

Query: 531 RKSISKAV 538
            + +S+A+
Sbjct: 161 LRGVSEAL 168


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 271/531 (51%), Gaps = 39/531 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN ++      G L        +M++ G +PN  TYN ++  YCKL  + EA
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++ LM      P++ +YN++ING C  G ++E   + +EM   + +PD VT+NTLIN 
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A  L  E+ ++G+ PN VT+  +I   CK G +++A + +  M + G  P+
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TLID   + G +++A+++M  M   G     IT N +++  C   ++++A  LL 
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG+  D VSY T+I+G+ R+++  +A +L  EM  + I P   TY+++I GL +  
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +  D+  E+L  G+ PDE T+ ++I+ +C EG ++KAL+ H++M++K F PDIVT N
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYN 557

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++G  ++   ++A +     + +    + +TYNTLI + C     + A  L+      
Sbjct: 558 VLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALMK----- 611

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPEEIDPSSI 483
                              G + EA +    M++ G K+N +V                 
Sbjct: 612 --------------GFCMKGLMNEADRVLESMLQKGYKLNEEV----------------- 640

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Y+  I+ H   G  + A  +++E    G A +  T M L   L    K +
Sbjct: 641 -YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEV 690



 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 274/539 (50%), Gaps = 33/539 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW-LK 62
           + C   +  ++ ++ +  +   +N+   +++  K  G +P   +YN ++    +    +K
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK 185

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A  +   M ++   P+V+TYN+LI G+C AG LE       EME    LP+VVTYNT+I
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTII 245

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + + +  +  EAFKL+  +   G+ PN +++N++I   C+EG++ +  +I+  M +  + 
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT+NTLI+  C  GN  +A  +   M + GL  N +T  T+++++C    L+ A   
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+    RG + +  +Y TLI G+ +     +A ++  EM E    P+  TYNA+I G   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ E A  +L E+++ G IPD  +++TII GFC   ++EKA Q   +MV K   PD+ T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + L+ GLC++  L +    F+  +  G   D VTY +LI++ C E  L+ A  L  EM 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +K   PD  TY  +     +  R +EA++    ++                  EE  P+ 
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY-----------------EESVPNE 588

Query: 483 ISYSEKINE---------------HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           I+Y+  I+                 C +G   +A ++ E   QKG  +N+  Y  +++G
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 254/477 (53%), Gaps = 15/477 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+ VTYNTI+DA  K  K+ E   LL  M  +GL PN  +YN++++G C+ G 
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE   +++ M++ + +PD  T+N LING+CN G   +A  L  EM    L P+VVTY T
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   ++G    A + +D++ + G+ PN  T+  +I  + ++G + +A +I++ M ENG
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P  +TYN LI+ +C  G ME+A  ++  M  +G   + ++ +TI+   C  ++L++A+
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +G   D  +Y +LI G  +  +      L+ EM    + P   TY ++I   
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  ++A+ + +E++Q G  PD  T+N +I+GF  + + ++A +   K++ +   P+ 
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588

Query: 361 VT-------CN--------ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +T       CN         L+ G C +G++ +A +   S + KG  ++   YN +I   
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGH 648

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            K   +E A+ L  EM      P   T  A+  +L   G+  E  +     +++ +I
Sbjct: 649 SKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRI 705



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 242/453 (53%), Gaps = 18/453 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME-AFKLIDE 140
            +++++       ++ +A  +    +S   +P V++YN +++    + +S++ A  +  E
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E G+ PN  T+NI+I+ +C  G ++        ME NG  P+ VTYNT+IDA CK   
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + EAF+++ +M  KGL  N I+ N +++ LC E ++ E   +L   SKR Y  D V++ T
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI GY      ++AL L  EM +  + P+  TY  +I  + ++G   +A++ L+++   G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+  T+ T+I GF  +G +++A Q   +MVE  F P I+T N L++G C  G +E A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
              +  I +G   D V+Y+T+IS  C+ + LE AF L  EM  K + PD  TY+++   L
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            +  RL E       M+  G                 + P  ++Y+  IN +C +G    
Sbjct: 494 CKQRRLGEVCDLFQEMLSLG-----------------LPPDEVTYTSLINAYCIEGDLDK 536

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           AL++ +E  QKG + +  TY  L+NG  K+ ++
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 202/401 (50%), Gaps = 15/401 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY T+++++ K G LN   + L  M+ +GL PN  TY  L+ G+ + G+LK+A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +N   P + TYN LING C  G +E+A  L +EM     +PDVV+Y+T+I+ 
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +    +AF+L  E+   GI P+  T++ +I+  CK+ ++ + C + + M   G  PD
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY +LI+A C  G++++A R+ D M +KG   + +T N +++    + +  EA  LL 
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 245 SASKRGYYLDEVSYGTLI---------------TGYFRDEKANRALKLWDEMKERQIMPS 289
                    +E++Y TLI                G+      N A ++ + M ++    +
Sbjct: 578 KLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLN 637

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
              YN +I G S+ G  E+A ++  E+L SG  P   T   +      EG+  +  Q  +
Sbjct: 638 EEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
             ++     +     +L+    +EG ++      +   L G
Sbjct: 698 YTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSG 738


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 165/533 (30%), Positives = 271/533 (50%), Gaps = 8/533 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  + YN +L AL     L   R LL+ M + G+ PN  TYNILV   C  G  +EA
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 65  MRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           + VV D M      P+V TYN L+  +C AG ++ A RL   M    + P +VT+NT++N
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++GR  +A K+ DE+   G+ P+ V++N ++  YCK G + +A  +   M + G  P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VT+ +LI A C+AGN+E A  ++  M  +GL+MN  T   ++   C    LD+A + +
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               +       V Y  LI GY +  + + A +L  EM+ + + P   TY+ ++ G  + 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G T+ A ++  ++L+ G++PD  T++++I G C E ++  A +   KM++   +PD  T 
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ G C+EG ++KAL      I KG   D VTY+ LI  L K  R ++A  LL ++  
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM--VETGKINHQVVQPNTSKTPEEIDPS 481
           +   PD   Y     AL+   R  E +   +++       + +Q  +   S         
Sbjct: 534 EDPVPDNIKY----EALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLD 589

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              YS  I+ HC  G    AL   ++  + G + N ++ ++L+ GL +   ++
Sbjct: 590 GSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTV 642



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 240/432 (55%), Gaps = 15/432 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VT+NT+++ L K G++ + R +  +M ++GL P+  +YN LVSGYCK G L EA
Sbjct: 220 GVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V   M Q   +PDV T+  LI+  C AG LE A  L  +M    L  +  T+  LI+ 
Sbjct: 280 LAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDG 339

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G   +A   + E+ E  I+P+ V +N++I  YCK G++D+A +++  ME  G  PD
Sbjct: 340 FCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY+T++   CK G+ + AF +   M +KG+  + IT ++++  LC E++L +A  L  
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   DE +Y TLI G+ ++    +AL L DEM ++ ++P   TY+ +I GLS+S 
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIH---------------GFCSEGQVEKALQFHN 349
           +T++A  +L +L     +PD   +  ++H               GF  +G + +A + + 
Sbjct: 520 RTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQ 579

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M+++ +K D    ++L+ G CR G + KAL F +  +  G + +S +  +L+  L +E 
Sbjct: 580 SMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEG 639

Query: 410 RLEDAFGLLSEM 421
              +A  ++ E+
Sbjct: 640 MTVEADNVIQEL 651


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 152/454 (33%), Positives = 241/454 (53%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+  T+N ++D L K+G+L E R L   MK  G  P+  TYN L+ GY K G L+E  +
Sbjct: 197 VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +V  M ++    DV TYN LIN +   G +E+A+    EM+   ++ +VVT++T ++ F 
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   EA KL  ++   G+ PN  T+  ++   CK G++D A  ++  M   G  P+ V
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY  ++D  CK G + EA  ++ +M R G+K N +   T++H        + A  LLN  
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G  LD   YGTLI G  +D+K + A  L  +M    + P+T  Y  ++  L ++GK 
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A+ +L+++L SG  P+  T+  +I G C  G + +A+   NKM E    P++     L
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+ G L KA+      I KG ++D V Y +LI    K+  L+DAF L ++M E  L
Sbjct: 557 IDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             D Y Y    +       ++EA+   S M+ TG
Sbjct: 617 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 242/456 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD VTYN+++D   K G L EV  L+S+M+K G   +  TYN L++ + K G 
Sbjct: 226 MKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGR 285

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A      M +   + +V T++  ++ +C  G+++EA +L  +M    ++P+  TY +
Sbjct: 286 MEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++GR  +A  L+DE+   G+ PN VT+ +M+   CKEGK+ +A  ++  ME  G
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + Y TLI  +    N E A  +++ M  KG++++     T++  LC ++K+DEA 
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+  +  G   + V Y T++   F+  K + A+ L  ++ +    P+  TY A+I GL
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +AI   N++ + G+ P+   +  +I GFC  G + KA+   N+M++K    D 
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDK 585

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+ G  ++  L+ A       I  G  +D   Y   IS  C    +++A G+LSE
Sbjct: 586 VVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSE 645

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           M    + PD+  Y  +     + G +EEA    + M
Sbjct: 646 MIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 213/422 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  D VTYN +++   K G++ +      +MK+QG+V N  T++  V  +CK G 
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGL 320

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EAM++   M     +P+ +TY  L++G C AG L++A  L  EM    L+P+VVTY  
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 380

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G+  EA  ++  ++  G+K N + +  +I  +      ++A  ++  M+  G
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   Y TLI   CK   ++EA  ++  M   GL+ NT+   TI+  L    K  EA 
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G+  + V+Y  LI G  +    + A+  +++M+E  + P+   Y A+I G 
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A+ ++NE++  GM  D+  + ++I G+  +  ++ A     KM+E   + D+
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDL 620

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                 +SG C   ++++A       I  G   D   YN LI    K   +E+A  L +E
Sbjct: 621 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNE 680

Query: 421 ME 422
           ME
Sbjct: 681 ME 682



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 240/485 (49%), Gaps = 36/485 (7%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L  +  +LP V   + L++   + G+L++A R    +  L++ P+  T N ++ R   + 
Sbjct: 126 LGPRRSALPSV--VDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNR 183

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +     +L D L      PN  T NI+I + CKEG++ +A  +   M+  G SPD VTYN
Sbjct: 184 QGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYN 239

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +LID   K G++EE  +++  M + G   + +T N +++      ++++AY       ++
Sbjct: 240 SLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ 299

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   + V++ T +  + ++     A+KL+ +M+ R +MP+ FTY +++ G  ++G+ + A
Sbjct: 300 GVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 359

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           I +L+E++  G++P+  T+  ++ G C EG+V +A    + M     K + +    L+ G
Sbjct: 360 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHG 419

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
                  E+AL        KG  +D   Y TLI  LCK++++++A  LL +M    L P+
Sbjct: 420 HFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN 479

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------------SKTPE 476
              Y  I  AL ++G+  EA      ++++G       QPN                  E
Sbjct: 480 TVIYTTIMDALFKAGKESEAVALLHKILDSG------FQPNVVTYCALIDGLCKAGSISE 533

Query: 477 EI-----------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            I           DP+  +Y+  I+  C  G    A+ +  E   KG++++K  Y +L++
Sbjct: 534 AISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLID 593

Query: 526 GLIKR 530
           G +K+
Sbjct: 594 GYMKQ 598



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 27/262 (10%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLS---QSGKTEQAIDMLNELLQSGMIPDETTFNT 330
           A++    +++ ++ P+T T N ++  L+   Q G   +  D+L        +P+  TFN 
Sbjct: 153 AVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP-------VPNVFTFNI 205

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I   C EG++ +A     +M      PD+VT N L+ G  + G LE+  +        G
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            A D VTYN LI+   K  R+E A+    EM+ + +  +  T++    A  + G ++EA 
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM 325

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           K  + M   G +                 P+  +Y+  ++  C  GR  DA+ + +E   
Sbjct: 326 KLFAQMRVRGMM-----------------PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 368

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
           +G+  N  TY  +++GL K  K
Sbjct: 369 QGLVPNVVTYTVMVDGLCKEGK 390



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 51/101 (50%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y +++D   K+  L +   L + M + GL  +   Y   +SG+C +  ++EA  V+
Sbjct: 584 DKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVL 643

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
             M      PD   YN LI  +   G +EEA  L+ EMES+
Sbjct: 644 SEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESV 684


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 246/460 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     PD VT+N ++DA F+ G +     L+  M  +G+ P   TYN ++ G  + G 
Sbjct: 185 MEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGR 244

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  V   M      PDV ++NMLI G+C AG LEEA R  KEM   ++ PDVV+++ 
Sbjct: 245 WDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSC 304

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G    A + + E+ E G+ P+ V + ++I  +C+ G + +A ++   M   G
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTL++  CK   + +A  +++ M  +G+  +  T  T++H  C +  +++A 
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              ++ S +    D V+Y TLI G  R     +A +LWD+M  R+I P+  TY+ +I   
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ + A   L+E++  G++P+  T+N+II G+C  G V K  QF  KM      PD+
Sbjct: 485 CEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDL 544

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L+ G  +EG + +A    +    +    D+VTYN +IS       +++A  +  +
Sbjct: 545 ITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKK 604

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  + + PDRYTY ++    V +G  +++ +    M++ G
Sbjct: 605 MGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644



 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 260/503 (51%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N ++ +  K  +  EV  ++S+M+K+ + P+  T+N++V    + G ++ AM ++D M
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + TYN ++ G    G  ++A  + + M++  + PDV ++N LI  F  +G  
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +   E+    + P+ V+ + +I  + + G++D A + +R M E G  PD V Y  +
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+AG M EA R+ D M   G   + +T NT+L+ LC E++L +A  LLN   +RG 
Sbjct: 341 IGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI GY RD    +AL+ +D + ++++ P   TYN +I G+ + G   +A +
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANE 460

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++    + P+  T++ +I   C +GQV+ A  F ++MV K   P+I+T N ++ G C
Sbjct: 461 LWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYC 520

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G + K  +F           D +TYNTLI    KE ++ +AF LL  ME + + PD  
Sbjct: 521 RSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAV 580

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I +     G ++EA      M   G                 I+P   +Y   IN 
Sbjct: 581 TYNMIISGFSVHGNMQEADWVYKKMGARG-----------------IEPDRYTYMSMING 623

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H   G  K + Q+ +E  QKG+A
Sbjct: 624 HVVAGNSKKSFQLHDEMLQKGLA 646



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 229/425 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYN++L  L + G+ ++ R++   M   G+ P+  ++N+L+ G+C+ G L+EA
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R    M   +  PDV +++ LI  +   G ++ A    +EM    L+PD V Y  +I  
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G  +EA ++ DE+   G  P+ VT+N ++   CKE ++  A +++  M+E G  PD
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+ TLI   C+ GN+E+A +  D +  + L+ + +T NT++  +C +  L +A  L +
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R  + + V+Y  LI  +    + + A    DEM  + I+P+  TYN++I G  +SG
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +    L ++    ++PD  T+NT+IHG+  EG++ +A      M  ++ +PD VT N
Sbjct: 524 NVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++SG    G +++A   ++    +G   D  TY ++I+        + +F L  EM +K
Sbjct: 584 MIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQK 643

Query: 425 KLGPD 429
            L PD
Sbjct: 644 GLAPD 648



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 176/325 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG +PD V Y  ++    + G + E   +  +M   G +P+  TYN L++G CK   
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +++ M +    PD+ T+  LI+G+C  G +E+A +    +   +L PD+VTYNT
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A +L D++    I PN VT++I+I  +C++G++D A   +  M   G
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYN++I   C++GN+ +  + +  M    +  + IT NT++H    E K+ EA+
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL          D V+Y  +I+G+        A  ++ +M  R I P  +TY +MI G 
Sbjct: 565 NLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGH 624

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
             +G ++++  + +E+LQ G+ PD+
Sbjct: 625 VVAGNSKKSFQLHDEMLQKGLAPDD 649



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 123/310 (39%), Gaps = 52/310 (16%)

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  LI  Y +  K   A + +  + + ++       NA++  LS++G      D    +L
Sbjct: 92  FDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRLVL 151

Query: 318 QSGMIPDETTFNTIIHGFCS-----------------------------------EGQVE 342
            S    +  T N ++H +C                                     G VE
Sbjct: 152 SSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVE 211

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A+   + MV K  KP +VT N +L GL R G  +KA + FR+    G A D  ++N LI
Sbjct: 212 AAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLI 271

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              C+   LE+A     EM  +++ PD  +++ +       G ++ A ++   M E G +
Sbjct: 272 GGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLM 331

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                            P  + Y+  I   C  G   +AL++ +E    G   +  TY  
Sbjct: 332 -----------------PDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374

Query: 523 LMNGLIKRRK 532
           L+NGL K R+
Sbjct: 375 LLNGLCKERR 384



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 17/220 (7%)

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           +D+++ LL S   P    F+ +I  +    +  +A +    +++          N LL+ 
Sbjct: 74  LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           L R G        +R  +     V++ T N ++ S CK  +  +   ++SEME++ + PD
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             T+  +  A   +G +E A      MV  G                 I P  ++Y+  +
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKG-----------------IKPGLVTYNSVL 236

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 GR+  A ++F      G+A +  ++  L+ G  +
Sbjct: 237 KGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCR 276


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 262/503 (52%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N ++ +  K  + ++   ++S+M+K+ + P+  T+N+L+    + G +  A+ +VD M
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + T+N ++ G C     ++A  + + M+   + PDV ++N LI  F   G  
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA K   E+ + G+ P+ V+ + +I  +   GK+D A   +R M+  G  PD V Y  +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+AG+M EA R+ D M   G   + +T NT+L+ LC + +L +A  LLN   +RG 
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI GY RD    +AL+L+D +  +++ P    YN++I G+ + G   +A +
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++    + P+  T++ +I   C +GQVE+A  F ++MV K   P+I+T N ++ G C
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G ++K  +F +  +      D +T+NTLI    KE  +  AF + + ME++ + PD  
Sbjct: 519 RSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAV 578

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I     E G +EEA +    M  +G                 I+P   +Y   IN 
Sbjct: 579 TYNMIINGFSEQGNMEEAGRVFKKMGASG-----------------IEPDRYTYMSLING 621

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H + G  K+A Q+ +E   +G A
Sbjct: 622 HVTAGNSKEAFQLHDEMMHRGFA 644



 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 146/460 (31%), Positives = 247/460 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     PD VT+N ++DA F+ G ++    L+  M  +GL P   T+N ++ G CK   
Sbjct: 183 MEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRR 242

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  V   M Q    PDV ++N+LI G+C  G +EEA +  KEM+   + PDVV+++ 
Sbjct: 243 FDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSC 302

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G+   A   + E+   G+ P+ V + ++I  +C+ G + +A ++   M   G
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG 362

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTL++  CK   + +A  +++ M  +G+  +  T  T++H  C +   ++A 
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKAL 422

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L ++   +    D V+Y +LI G  R     +A +LWD+M  R+I P+  TY+ +I   
Sbjct: 423 QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSH 482

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E+A   L+E++  G +P+  T+N+II G+C  G V+K  QF  KM++ +  PD+
Sbjct: 483 CEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDL 542

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L+ G  +E  +  A   F     +    D+VTYN +I+   ++  +E+A  +  +
Sbjct: 543 ITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKK 602

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M    + PDRYTY ++    V +G  +EA +    M+  G
Sbjct: 603 MGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 254/490 (51%), Gaps = 18/490 (3%)

Query: 57  KLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + GW   A     L+  + S  + +T N++++ +C +   ++A  +  EME   + PDVV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T+N LI+  F +G    A  L+D +   G+KP  VT N ++K  CK  + DKA ++ R M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           ++   +PD  ++N LI   C+ G +EEA +    M ++G+  + ++ + ++       K+
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D A   L      G   D V Y  +I G+ R    + AL++ DEM     +P   TYN +
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           + GL +  +   A ++LNE+ + G+ PD  TF T+IHG+C +G  EKALQ  + ++ +  
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +PD+V  N L+ G+CR+G L KA + +     +    + VTY+ LI S C++ ++E+AFG
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFG 493

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET--------------GKI 462
            L EM  K   P+  TY +I      SG +++ Q+F   M++               G I
Sbjct: 494 FLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYI 553

Query: 463 N----HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                H           E + P +++Y+  IN    QG  ++A ++F++    GI  ++ 
Sbjct: 554 KEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRY 613

Query: 519 TYMNLMNGLI 528
           TYM+L+NG +
Sbjct: 614 TYMSLINGHV 623



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 229/425 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VT+N++L  L K  + ++ +++   M +  + P+  ++NIL+ G+C++G ++EA
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M+    M Q    PDV +++ LI  +   G ++ A    +EM+ L L+PD V Y  +I  
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGG 341

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G   EA ++ DE+   G  P+ VT+N ++   CK+ ++  A +++  M+E G +PD
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+ TLI   C+ GN E+A ++ D +  + L+ + +  N+++  +C +  L +A  L +
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWD 461

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R  + + V+Y  LI  +    +   A    DEM  +  +P+  TYN++I G  +SG
Sbjct: 462 DMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSG 521

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++    L +++Q  ++PD  TFNT+IHG+  E  +  A    N M ++  +PD VT N
Sbjct: 522 NVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYN 581

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++++G   +G +E+A + F+     G   D  TY +LI+        ++AF L  EM  +
Sbjct: 582 MIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHR 641

Query: 425 KLGPD 429
              PD
Sbjct: 642 GFAPD 646



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 177/325 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G +PD V Y  ++    + G ++E   +  +M   G +P+  TYN L++G CK   
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +++ M +    PD+ T+  LI+G+C  G  E+A +L   +   +L PDVV YN+
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A +L D++    I PN VT++I+I  +C++G++++A   +  M   G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYN++I   C++GN+++  + +  M +  +  + IT NT++H    E+ +  A+
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAF 562

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N   K     D V+Y  +I G+        A +++ +M    I P  +TY ++I G 
Sbjct: 563 NVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGH 622

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
             +G +++A  + +E++  G  PD+
Sbjct: 623 VTAGNSKEAFQLHDEMMHRGFAPDD 647



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 186/388 (47%), Gaps = 70/388 (18%)

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           EEA+R+  V+     ++N  TLN ++H+ C   + D+A  +++   KR  + D V++  L
Sbjct: 142 EEAYRL--VLSSDS-EVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVL 198

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I   FR    + A+ L D M  + + P   T+N+++ GL +  + ++A ++   + Q  +
Sbjct: 199 IDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSV 258

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------- 368
            PD  +FN +I GFC  G+VE+A++F+ +M ++   PD+V+ + L+              
Sbjct: 259 APDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAA 318

Query: 369 ----------------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
                                 G CR G + +AL+     +  G   D VTYNTL++ LC
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLC 378

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQ 465
           K+ RL DA  LL+EM+E+ + PD  T+  +       G  E+A Q F +++       HQ
Sbjct: 379 KQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL-------HQ 431

Query: 466 VVQPNT----------------SKTPE--------EIDPSSISYSEKINEHCSQGRYKDA 501
            ++P+                 +K  E        EI P+ ++YS  I+ HC +G+ ++A
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
               +E   KG   N  TY +++ G  +
Sbjct: 492 FGFLDEMVSKGNLPNIMTYNSIIKGYCR 519



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 21/247 (8%)

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++++ LL S   P    F+ +I  +    +  +A +    +++          N LL+ L
Sbjct: 73  EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAAL 132

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            R G    A + +R  +     V++ T N ++ S CK    + A  ++SEME++ + PD 
Sbjct: 133 SRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDV 192

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----------SKTPE--- 476
            T+  +  A   +G ++ A      M   G +   +V  N+            K  E   
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMANKG-LKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 477 -----EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 + P   S++  I   C  G  ++A++ ++E +Q+G+  +  ++  L+ GL   R
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFSTR 310

Query: 532 KSISKAV 538
             +  A 
Sbjct: 311 GKMDHAA 317


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/467 (33%), Positives = 253/467 (54%), Gaps = 5/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P++V Y T++ AL +  +++E   LL DM      P+  T+N ++ G C+ G 
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +++D M       D  TY  L++G C  G ++EA  L  ++ +    P+ V YNT
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNT 346

Query: 121 LINRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LI+ +  SGR  EA  L+ + +   G +P+A T NIMI    K+G +  A +++  M   
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            F P+ +TY  LI+  CK G +EEA  +++ M  KGL +NT+  N ++  LC +  ++EA
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L    S +G   D  ++ +LI G  ++ K   AL L+ +M    ++ +T TYN ++  
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
                  +QA  +++E+L  G   D  T+N +I   C  G VEK L    +M+ K   P 
Sbjct: 527 FLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPT 586

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I++CNIL+SGLCR G +  ALKF +  I +G   D VTYN+LI+ LCK   +++A  L +
Sbjct: 587 IISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFN 646

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +++ + + PD  TY  + +     G   +A       V++G I ++V
Sbjct: 647 KLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEV 693



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 269/559 (48%), Gaps = 49/559 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           + C P   +YN +LD L          ++  DM  +G+ P   T+ +++   C +  +  
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDS 223

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  ++  M ++  +P+   Y  LI+  C    + EA +L ++M  +   PDV T+N +I+
Sbjct: 224 ACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIH 283

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV---------- 173
               +GR  EA KL+D +   G   +A+T+  ++   C+ G++D+A  ++          
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVL 343

Query: 174 ----------------------RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                                  NM   G+ PD  T+N +ID   K G +  A  +++ M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             K  + N IT   +++  C + +L+EA  ++NS S +G  L+ V Y  LI    +D   
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             AL+L+ EM  +   P  +T+N++I GL ++ K E+A+ + +++   G+I +  T+NT+
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +H F     +++A +  ++M+ +    D +T N L+  LC+ G +EK L  F   + KG 
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
               ++ N LIS LC+  ++ DA   L +M  + L PD  TY ++   L + G ++EA  
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASN 643

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             + +   G                 I P +I+Y+  I+ HC +G + DA  +  +    
Sbjct: 644 LFNKLQSEG-----------------IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDS 686

Query: 512 GIAINKSTYMNLMNGLIKR 530
           G   N+ T+  L+N ++K+
Sbjct: 687 GFIPNEVTWSILINYIVKK 705



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 260/537 (48%), Gaps = 59/537 (10%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++D L   G    +  LL  MK +GL+   + + +++  Y K G   +A R+        
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRL-------- 156

Query: 76  SLPDVW-TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
            L D+W  Y+      C+                    P   +YN +++   +      A
Sbjct: 157 -LLDMWGVYS------CD--------------------PTFKSYNVVLDILVDGDCPRVA 189

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
             +  ++   G+ P   T  +++K  C   ++D AC ++R+M ++G  P+ V Y TLI A
Sbjct: 190 PNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHA 249

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C+   + EA ++++ M     + +  T N ++H LC   ++ EA  LL+    RG+  D
Sbjct: 250 LCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTD 309

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML- 313
            ++YG L+ G  R  + + A  L +++      P+T  YN +I G   SG+ E+A D+L 
Sbjct: 310 ALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLY 365

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           N ++ +G  PD  TFN +I G   +G +  AL+  N+MV K F+P+++T  IL++G C++
Sbjct: 366 NNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQ 425

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G LE+A +   S   KG ++++V YN LI +LCK+  +E+A  L  EM  K   PD YT+
Sbjct: 426 GRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTF 485

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQV----------VQPNTSKTPEEIDP--- 480
            ++   L ++ ++EEA      M   G I + V          ++ +  +  + +D    
Sbjct: 486 NSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLF 545

Query: 481 -----SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                 +I+Y+  I   C  G  +  L +FEE   KGI     +   L++GL +  K
Sbjct: 546 RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGK 602



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 118/228 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC PD  T+N++++ L K  K+ E   L  DM  +G++ N  TYN LV  +     
Sbjct: 473 MSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDS 532

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A ++VD M       D  TYN LI   C  G +E+   L +EM    + P +++ N 
Sbjct: 533 IQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNI 592

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    +G+  +A K + ++   G+ P+ VT+N +I   CK G + +A  +   ++  G
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
             PD +TYNTLI  +C  G   +A  ++      G   N +T + +++
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  276 bits (707), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 277/568 (48%), Gaps = 54/568 (9%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P +V Y  +L  L K G    +R +L +MK  G    R T+ IL+  Y K     EA+ 
Sbjct: 102 VPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVA 161

Query: 67  VVDLMTQNKSL------------------------------------PDVWTYNMLINGW 90
           VVD+M +   L                                    PDV T+N+LI   
Sbjct: 162 VVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C A  +  A  + +EM S  L PD  T+ TL+  F E G    A ++ +++   G   + 
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           VT N+++  YCKEG+I++    +  M   GF PD  T+N+L++  C+ G+++ A  ++DV
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M ++G   +  T N+++  LC   +++EA  +LN    R +  + V+Y TLI+   ++ +
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A +L   +  + I+P   T+N++I GL  +     A+++  E+   G  PDE T+N 
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I   CS G++E+AL    +M       ++VT N L+ G C+   +E+A + F    L+G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            + + VTYNTLI  LCK RR+E+A  L+ +M  + L PD++TY ++ T    +G +++A 
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAA 581

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                M   G                  +P S++Y   I      GR + A ++    + 
Sbjct: 582 DIVQTMTSNG-----------------CEPDSVTYGTLILGLSKAGRVELASRLLRTVQL 624

Query: 511 KGIAINKSTYMNLMNGLIKRRKSISKAV 538
           KG+ +   TY  ++  L  R K  S+AV
Sbjct: 625 KGMVLAPQTYNPVIKALF-REKRTSEAV 651



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 162/538 (30%), Positives = 275/538 (51%), Gaps = 17/538 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E FG   D  TYN +L+ L    KL  V  + S M  +G+ P+ TT+NIL+   C+   +
Sbjct: 168 EEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQI 227

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + A+ +++ M      PD  T+  L+ G+   G +  A R+R++M +       VT N L
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++ + + GR  E    IDE+   G +P+  T N ++   C+ G +  A +I+  M + GF
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGF 347

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD  TYN+LI   CK G +EEA  +++ M  +    NT+T NT++ TLC E +++EA  
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE 407

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L    + +G   D  ++ +LI G         A++L++EMK +   P  FTYN +I  L 
Sbjct: 408 LARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLC 467

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G+ E+A+ +L E+  SG   +  T+NT+I GFC   ++E+A +  ++M  +    ++V
Sbjct: 468 SRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+ GLC+   +E+A +     +++G   D  TYN+L++  C+   ++ A  ++  M
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
                 PD  TY  +   L ++GR+E A +    ++ T ++   V+ P T          
Sbjct: 588 TSNGCEPDSVTYGTLILGLSKAGRVELASR----LLRTVQLKGMVLAPQT---------- 633

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              Y+  I     + R  +A+++F E  +KG   +  TY  +  GL      I +AVD
Sbjct: 634 ---YNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVD 688



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 241/461 (52%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  PD  T+ T++    ++G +N    +   M   G   +  T N+LV GYCK G 
Sbjct: 237 MGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGR 296

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++E +  +D M+     PD +T+N L+NG C  G ++ A  +   M      PD+ TYN+
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNS 356

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    + G   EA ++++++      PN VT+N +I   CKE ++++A ++ R +   G
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+N+LI   C   N   A  + + M  KG   +  T N ++ +LC   +L+EA 
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   + V+Y TLI G+ ++++   A +++DEM+ + I  +  TYN +I GL
Sbjct: 477 SLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGL 536

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + E+A  +++++L  G+ PD+ T+N+++  FC  G ++KA      M     +PD 
Sbjct: 537 CKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDS 596

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L+ GL + G +E A +  R+  LKG  +   TYN +I +L +E+R  +A  L  E
Sbjct: 597 VTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFRE 656

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETG 460
           M EK   PD  TY  +   L    G + EA  F   M + G
Sbjct: 657 MMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKG 697



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/429 (33%), Positives = 225/429 (52%), Gaps = 9/429 (2%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF   PD  TYN+++  L K G++ E  ++L+ M  +   PN  TYN L+S  CK   +
Sbjct: 345 EGFD--PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +EA  +  ++T    LPDV T+N LI G C       A  L +EM++    PD  TYN L
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+     GR  EA  L+ E++  G   N VT+N +I  +CK  +I++A +I   ME  G 
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           S + VTYNTLID  CK   +EEA ++MD M  +GLK +  T N++L   C    + +A  
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAAD 582

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           ++ + +  G   D V+YGTLI G  +  +   A +L   ++ + ++ +  TYN +I  L 
Sbjct: 583 IVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALF 642

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDI 360
           +  +T +A+ +  E+++ G  PD  T+  +  G CS G  + +A+ F  +M +K F PD 
Sbjct: 643 REKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDF 702

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG---- 416
            +  +L  GLC   + +  +K     + +    DS    ++I    K R+ +DA      
Sbjct: 703 SSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV--SMIMGFLKIRKFQDALATLGR 760

Query: 417 LLSEMEEKK 425
           +LS  E KK
Sbjct: 761 ILSSREPKK 769


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 261/460 (56%), Gaps = 6/460 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD V YN +L+ L K+ +L EV  LL +M + G  P+  +YN +V+  C+ G 
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA ++++ M + K  PDV TYN L++G+C    ++EA RL ++M   +  P V+TY T
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F  + R  +A+++++++ + GI P+ VT+N ++   CK GK+++A +++  M E  
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY+ L++  CK G +++A  ++++M  +G + N +T NT++   C   K+DE +
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    +     D V+Y TLI GY    KANR   + D      I P   +Y++M+ GL
Sbjct: 428 KVLELMKEVSCTPDVVTYSTLIDGYC---KANR---MQDAFAILGISPDKASYSSMLEGL 481

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E+A ++++ + + G  P  + +  II G C   + ++AL+    M E+  +P++
Sbjct: 482 CSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNL 541

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T +IL++GLC+   +E A+      + KG   D  TY +LI   CK  +++ A+     
Sbjct: 542 YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKT 601

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M +    PD+  Y  + +   +SG +E+A +   +M+E G
Sbjct: 602 MRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKG 641



 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 271/528 (51%), Gaps = 25/528 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P   TY  ++  L +  +++E   LL +M ++   P+   YN L++G CK+G +  A 
Sbjct: 88  CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAAR 147

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+ +M +   +PDV TY  LI G C    L+EA +L ++M+   L PD V YN L+N  
Sbjct: 148 NVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGL 207

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +  +  E  KL++E+ E G +P+  ++N ++   C+ GK ++A KI+  M E    PD 
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDV 267

Query: 186 VTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           VTYN+L+D  CK   M+EA R++ D++GR+      IT  T++       +L +AY ++ 
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVGRR-CAPTVITYTTLIGGFSRADRLADAYRVME 326

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   D V+Y  L+ G  +  K   A +L + M E+   P   TY+ ++ GL + G
Sbjct: 327 DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG 386

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A  +L  +L+ G  P+  TFNT+I GFC  G+V++  +    M E S  PD+VT +
Sbjct: 387 KVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYS 446

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C+   ++ A          G + D  +Y++++  LC   ++E+A  ++  M ++
Sbjct: 447 TLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQ 500

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P    YA I   L +  R +EA K   +M E G                  +P+  +
Sbjct: 501 GCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERG-----------------CEPNLYT 543

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           YS  IN  C   R +DA+ + +   +KG   + +TY +L++G  K  K
Sbjct: 544 YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 281/522 (53%), Gaps = 23/522 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+PD +TY +++    +   L+E R L+  MK+ GL P+   YN L++G CK   L+E  
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++++ M +    PD ++YN ++   C +G  EEA ++ ++M   K  PDVVTYN+L++ F
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +  +  EA +L++++      P  +T+  +I  + +  ++  A +++ +M + G SPD 
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN L+D  CKAG +EEA  +++VM  K    + +T + +++ LC   K+D+A +LL  
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG   + V++ T+I G+ +  K +   K+ + MKE    P   TY+ +I G  ++ +
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A  +L      G+ PD+ ++++++ G CS G+VE+A +  + M ++   P      +
Sbjct: 458 MQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYAL 511

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ GLC     ++ALK  +    +G   +  TY+ LI+ LCK +R+EDA  +L  M EK 
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKG 571

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD  TY ++     +  +++ A +    M ++G                  +P  ++Y
Sbjct: 572 CVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG-----------------CEPDKLAY 614

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  I+  C  G  + A+++ +   +KG   + +TY +LM  L
Sbjct: 615 NILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 146/403 (36%), Positives = 233/403 (57%), Gaps = 6/403 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD VTYN+++D   K  K++E   LL DM  +   P   TY  L+ G+ +   L +A 
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           RV++ M +    PD+ TYN L++G C AG LEEA  L + M      PDVVTY+ L+N  
Sbjct: 323 RVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGL 382

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G+  +A  L++ + E G +PN VT N MI  +CK GK+D+  K++  M+E   +PD 
Sbjct: 383 CKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDV 442

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY+TLID  CKA  M++AF ++      G+  +  + +++L  LC   K++EA  +++ 
Sbjct: 443 VTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDL 496

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            +K+G       Y  +I G    E+ + ALK+   M ER   P+ +TY+ +I GL ++ +
Sbjct: 497 MTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKR 556

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E AI++L+ +L+ G +PD  T+ ++I GFC   +++ A Q    M +   +PD +  NI
Sbjct: 557 VEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNI 616

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           L+SG C+ G +EKA++  +  + KG   D+ TY +L+ SL  E
Sbjct: 617 LISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 277/558 (49%), Gaps = 56/558 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG-------- 59
           P N TY  ++    + G    V ++ ++M  +   P+  T+N ++  YC++G        
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 60  -----W--------------------LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
                W                    + EA +++D M Q    PD   YN LI G C  G
Sbjct: 82  FRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
            ++ A  + K M     +PDV+TY +LI    ++    EA KL++++ E G+ P+ V +N
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            ++   CK+ ++++  K++  M E G  PD  +YNT++   C++G  EEA ++++ M  K
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
               + +T N+++   C   K+DEA  LL     R      ++Y TLI G+ R ++   A
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            ++ ++M +  I P   TYN ++ GL ++GK E+A ++L  +++    PD  T++ +++G
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C  G+V+ A      M+E+  +P++VT N ++ G C+ G +++  K            D
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTY+TLI   CK  R++DAF +L       + PD+ +Y+++   L  +G++EEAQ+   
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKVEEAQEVMD 495

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           +M + G                   P+S  Y+  I   C   R  +AL++ +   ++G  
Sbjct: 496 LMTKQG-----------------CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCE 538

Query: 515 INKSTYMNLMNGLIKRRK 532
            N  TY  L+NGL K ++
Sbjct: 539 PNLYTYSILINGLCKTKR 556



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 250/504 (49%), Gaps = 31/504 (6%)

Query: 30  RDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING 89
           R+  SD  K    P+ +TY  L++G+ + G  K  + + + M   +  PDV T+N ++  
Sbjct: 13  RERFSDPSK----PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKA 68

Query: 90  WCNAGMLEEAF-RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           +C  G L+ A    R +M      P   TY  LI+   +  R  EA++L+DE+ +    P
Sbjct: 69  YCQIGDLDRALSHFRGKMWC---SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHP 125

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +A  +N +I   CK GKID A  +++ M E    PD +TY +LI   C+   ++EA ++M
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M   GL  +T+  N +L+ LC + +L+E   LL    + G   D  SY T++      
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            K   A K+ ++M E++  P   TYN+++ G  +  K ++A  +L +++     P   T+
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            T+I GF    ++  A +    M +    PD+VT N LL GLC+ G LE+A +     + 
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           K  A D VTY+ L++ LCK  +++DA  LL  M E+   P+  T+  +     ++G+++E
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
             K   +M E                     P  ++YS  I+ +C   R +DA  I    
Sbjct: 426 GHKVLELMKEV-----------------SCTPDVVTYSTLIDGYCKANRMQDAFAIL--- 465

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
              GI+ +K++Y +++ GL    K
Sbjct: 466 ---GISPDKASYSSMLEGLCSTGK 486



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 216/435 (49%), Gaps = 19/435 (4%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           E +   +E  S    P   TY  LI  F  +G S    ++ +E+      P+ +THN ++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           K YC+ G +D+A    R   +   SP   TY  LI   C+   ++EA++++D M +K   
Sbjct: 67  KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            +    N ++  LC   K+D A  +L    +R    D ++Y +LI G  +    + A KL
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            ++MKE  + P T  YNA++ GL +  + E+   +L E++++G  PD  ++NT++   C 
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G+ E+A +   KM+EK   PD+VT N L+ G C+   +++A +     + +  A   +T
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y TLI    +  RL DA+ ++ +M +  + PD  TY  +   L ++G+LEEA +   +MV
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           E                 ++  P  ++YS  +N  C  G+  DA  + E   ++G   N 
Sbjct: 365 E-----------------KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407

Query: 518 STYMNLMNGLIKRRK 532
            T+  +++G  K  K
Sbjct: 408 VTFNTMIDGFCKAGK 422



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 192/403 (47%), Gaps = 19/403 (4%)

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R +E +    E      KP+  T+  +I  + + G      +I   M    FSPD +T+N
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           T++ A C+ G+++ A       G+        T   ++H LC  +++DEAY LL+   ++
Sbjct: 64  TILKAYCQIGDLDRALSHF--RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
             + D   Y  LI G  +  K + A  +   M ER  +P   TY ++I G  Q+   ++A
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             ++ ++ +SG+ PD   +N +++G C + Q+E+  +   +MVE   +PD  + N +++ 
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC  G  E+A K     I K    D VTYN+L+   CK  ++++A  LL +M  ++  P 
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY  +      + RL +A +    M + G                 I P  ++Y+  +
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAG-----------------ISPDLVTYNCLL 344

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  C  G+ ++A ++ E   +K  A +  TY  L+NGL K  K
Sbjct: 345 DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 112/189 (59%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  +Y+++L+ L   GK+ E ++++  M KQG  P  + Y +++ G C +    E
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++ +M++    P+++TY++LING C    +E+A  +   M     +PDV TY +LI+
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F +  +   A++    + + G +P+ + +NI+I  +C+ G ++KA ++++ M E G +P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644

Query: 184 DCVTYNTLI 192
           D  TY +L+
Sbjct: 645 DAATYFSLM 653


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 165/513 (32%), Positives = 258/513 (50%), Gaps = 17/513 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F  LP   + N +L  L K G    VR   +DM   G+ P+  TYN+++   CK G 
Sbjct: 245 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 304

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ + R+   M +    PDV TYN LI+G+   G LEE   L  EM+ +  +PD++TYN 
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + +  +   AF+   E+  +G+KPN VT++ +I  +CKEG +  A K+  +M   G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY +LIDANCKAGN+ EA+++++ M + G+K+N +T   +L  LC   ++ EA 
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S  K G   ++  Y  L+ GY + E+   A+K+  +M E  I P    Y ++IWG 
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K E+   +L E+   G+  +     TII  +   G+   AL F  +M +   +  I
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+ GLC+ GI+E A+ +F   +  G   +   Y +LI  LCK   +E A  L  E
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDE 664

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+ + + PD   + A+    ++ G L+EA    S M E                   I+ 
Sbjct: 665 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA-----------------IEF 707

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
               Y+  ++     G    A + F E  +KGI
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 740



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 223/458 (48%), Gaps = 17/458 (3%)

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T+N  +     +++L + +   G+LEEA      M + + LP   + N L++R  +SG  
Sbjct: 211 TRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNG 270

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
               K  +++   GI P+  T+N+MI + CKEG ++ + ++   M E G SPD VTYN+L
Sbjct: 271 QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL 330

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID   K G++EE   + + M   G   + IT N +++  C  +K+  A+   +     G 
Sbjct: 331 IDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGL 390

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + V+Y TLI  + ++     A+KL+ +M+   ++P+ FTY ++I    ++G   +A  
Sbjct: 391 KPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 450

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +LN++LQ+G+  +  T+  ++ G C  G++ +A +    M++    P+      L+ G  
Sbjct: 451 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 510

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +   +E A+K  +         D + Y ++I   C +R+LE+   +L EM+ + +  +  
Sbjct: 511 KAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 570

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
               I  A  ++G+  +A  F   M + G                 ++ + ++Y   I+ 
Sbjct: 571 ISTTIIDAYFKAGKSSDALNFFQEMQDVG-----------------VEATIVTYCVLIDG 613

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            C  G  + A+  F      G+  N + Y +L++GL K
Sbjct: 614 LCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 231/489 (47%), Gaps = 17/489 (3%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           V     +++L S + +LG L+EA      M   ++LP   + N L++    +G  +   +
Sbjct: 216 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 275

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
              +M    + P V TYN +I+   + G    + +L  ++ E G+ P+ VT+N +I  Y 
Sbjct: 276 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K G +++   +   M++ G  PD +TYN LI+  CK   M  AF     M   GLK N +
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T +T++   C E  +  A  L     + G   +E +Y +LI    +      A KL ++M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            +  +  +  TY A++ GL ++G+  +A ++   +L+ G+ P++  +  ++HG+    ++
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 515

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E A++   +M E + KPD++    ++ G C +  LE+          +G + + V   T+
Sbjct: 516 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 575

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I +  K  +  DA     EM++  +     TY  +   L ++G +E A  +   M+  G 
Sbjct: 576 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG- 634

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                +QPN +            Y+  I+  C     + A ++F+E + +G+  + + + 
Sbjct: 635 -----LQPNVA-----------VYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFT 678

Query: 522 NLMNGLIKR 530
            L++G +K 
Sbjct: 679 ALIDGNLKH 687



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 17/382 (4%)

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             +++   + + G +++A +    M      P   + N L+    K+GN +   +  + M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              G+  +  T N ++  LC E  L+ +  L     + G   D V+Y +LI GY +    
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
                L++EMK+   +P   TYN +I    +  K  +A +  +E+  +G+ P+  T++T+
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I  FC EG ++ A++    M      P+  T   L+   C+ G L +A K     +  G 
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            ++ VTY  L+  LCK  R+ +A  +   M +  + P++  Y A+    +++ R+E+A K
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M E                   I P  I Y   I  HCSQ + ++   I EE + +
Sbjct: 521 ILKQMTECN-----------------IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563

Query: 512 GIAINKSTYMNLMNGLIKRRKS 533
           GI+ N      +++   K  KS
Sbjct: 564 GISANPVISTTIIDAYFKAGKS 585



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 20/266 (7%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           E+AN     +  M+  + +P   + N ++  LS+SG  +      N+++ +G+ P   T+
Sbjct: 236 EEANEC---FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 292

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I   C EG +E + +   +M E    PD+VT N L+ G  + G LE+    F     
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 352

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D +TYN LI+  CK  ++  AF   SEM+   L P+  TY+ +  A  + G ++ 
Sbjct: 353 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 412

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A K    M  TG +                 P+  +Y+  I+ +C  G   +A ++  + 
Sbjct: 413 AIKLFVDMRRTGLL-----------------PNEFTYTSLIDANCKAGNLTEAWKLLNDM 455

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKSI 534
            Q G+ +N  TY  L++GL K  + I
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMI 481



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 106/223 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   + V   TI+DA FK GK ++  +   +M+  G+     TY +L+ G CK G 
Sbjct: 560 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGI 619

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+     M      P+V  Y  LI+G C    +E A +L  EM+   + PD+  +  
Sbjct: 620 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTA 679

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   EA  LI  + E  I+ +   +  ++  + + G++ +A K    M E G
Sbjct: 680 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
             P+ V    L+    K G ++EA  + + M R GL   + T+
Sbjct: 740 ILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESATM 782


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 275/539 (51%), Gaps = 18/539 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  PD  TY+T L+A  K    +  + +  +M+++    N  TYN+++SG C+ G 
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA    + M      PD +TY  L+NG C  G L+EA  L  EM    L P+VV Y T
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + G++ EAF +++E+   G++PN + ++ +I+  CK G++ +A K++  M + G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY+ L+  + +  + + AF +++ M   G+  N  T   +++ LC   +  EA 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   +   Y  LI G+ ++   + A +  + M +  ++P  F YN++I GL
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S  G+ E+A +   ++ + G++PDE T++ +IHG+C    +EKA Q   +M+    KP+ 
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   LL G  +    EK     +S +  G   D+  Y  +I +L +   +E AF +L+E
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +E+  L PD + Y+++ + L +   +E+A      M + G                 ++P
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG-----------------LEP 698

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
             + Y+  I+  C  G    A  +F+    KG+  N  TY  L++G  K    I+ A D
Sbjct: 699 GIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCK-NGDITDAFD 756



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 158/537 (29%), Positives = 262/537 (48%), Gaps = 17/537 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V Y T++D   K+GK  E  D+L++M   G+ PN+  Y+ L+ G CK+G L  A
Sbjct: 345 GLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 404

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++ M +    PD +TY+ L+ G       + AF L  EM +  +LP+  TY  +IN 
Sbjct: 405 SKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMING 464

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G S EA  L++E+   G+KPNA  +  +I  + KEG I  AC+ + NM +    PD
Sbjct: 465 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPD 524

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN+LI      G +EEA      + ++GL  +  T + ++H  C  + L++A  LL 
Sbjct: 525 LFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQ 584

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +  +Y  L+ GYF+     +   +   M      P    Y  +I  LS+S 
Sbjct: 585 QMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 644

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E A  +L E+ ++G++PD   ++++I G C    +EKA+   ++M ++  +P IV  N
Sbjct: 645 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYN 704

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G CR G + +A   F S + KG   + VTY  LI   CK   + DAF L  +M ++
Sbjct: 705 ALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDR 764

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP------------NTS 472
            + PD + Y  + T   ++  LE+A   T  M   G  +  +                T 
Sbjct: 765 GIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETE 824

Query: 473 K-----TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           K        EI P++ +    I E    G+  +A ++F E +QK  + + +   +L+
Sbjct: 825 KLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLL 881



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 258/542 (47%), Gaps = 19/542 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           + ++D   K G +     ++  M   GL P R   N L+    +   ++   ++   M  
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               PDV+TY+  +   C A   + A ++ +EM       + VTYN +I+    SG   E
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           AF   +E+ ++G+ P+A T+  ++   CK G++ +A  ++  M  +G  P+ V Y TL+D
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
              K G   EAF +++ M   G++ N I  + ++  LC   +L  A  LLN   K G+  
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D  +Y  L+ G+F+    + A +L +EM+   I+P+ +TY  MI GL Q+G++++A ++L
Sbjct: 419 DTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLL 478

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E++  G+ P+   +  +I G   EG +  A +    M + +  PD+   N L+ GL   
Sbjct: 479 EEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTV 538

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G +E+A +++     +G   D  TY+ LI   CK R LE A  LL +M    L P+  TY
Sbjct: 539 GRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTY 598

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETG--KINH--QVVQPNTSKTPE---------EID- 479
             +     +S   E+       M+ +G    NH   +V  N S++           E++ 
Sbjct: 599 TDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEK 658

Query: 480 ----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
               P    YS  I+  C     + A+ + +E  ++G+      Y  L++G   R   IS
Sbjct: 659 NGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC-RSGDIS 717

Query: 536 KA 537
           +A
Sbjct: 718 RA 719



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD   Y++++  L K   + +   LL +M K+GL P    YN L+ G+C+ G +  A
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 719

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D +     LP+  TY  LI+G C  G + +AF L K+M    + PD   YN L   
Sbjct: 720 RNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    +A  L +E+   G   +    + +++ +CK G++ +  K++  M +    P+
Sbjct: 780 CSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPN 838

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
             T   +I    KAG + EA R+   + +K    ++    ++L T
Sbjct: 839 AQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFT 883


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 273/553 (49%), Gaps = 57/553 (10%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  +YN +LD L K G       +  D+   G  PN  T+ IL+ G CK G    A+  +
Sbjct: 26  DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             + +    PDV+ +N+LI+G    G  ++A +L + MES ++ P++VTYNT+I+   +S
Sbjct: 86  RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145

Query: 129 GRSMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           G   +A +L++E+   G K  P+ VT+N +I  + +  +I +AC     M+  G +PD +
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T N L+   CK G++EEA  ++D M   G   + IT N+I+H LC   K+ EA  +L + 
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           S      D V++ TL+ G+ +     RAL++ +EM    I+P   TY  ++ GL + G+ 
Sbjct: 266 SCSP---DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQV 322

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE------------------------ 342
           + A  +L E+++ G IPD   + +++ G C  G++E                        
Sbjct: 323 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL 382

Query: 343 -----------KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
                      KA +   +MV  +  P + T NI+L GL ++G + KA+      + +G 
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VTYNTLI  LCK  R+ +A  L  EM  +   P+  T  ++   L   GR+++A  
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW- 501

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             S++VE  +  H               P+ + Y+  I+  C   R  DA  + +  R +
Sbjct: 502 --SLVVEMSRKRHA--------------PNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQ 545

Query: 512 GIAINKSTYMNLM 524
           G+A++   Y  L+
Sbjct: 546 GVALDDFAYRKLI 558



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 255/479 (53%), Gaps = 9/479 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           ME     P+ VTYNT++  L K G L + R+LL +M ++G    P+  TYN L++ + + 
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             ++EA    + M      PDV T N+L++G C  G +EEA  +   M+    +PDV+TY
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N++I+    +G+ +EA +++  +      P+ VT N ++  +CK G + +A +++  M  
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD +TY  L++  C+ G ++ AF +++ + R+G   + I   +++  LC   +++E
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+ L+   S RG     V Y +L++GY R    ++A ++  EM    ++P  FTYN ++ 
Sbjct: 360 AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLG 419

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL + G   +A+ ++++L+  G +PD  T+NT+I G C   +V +A    ++M  +   P
Sbjct: 420 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFP 479

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           + VT   ++ GLCR G ++ A         K  A + V Y +LI  LCK  R++DA  +L
Sbjct: 480 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVL 539

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             M  + +  D + Y  +  ++   GR+ EA      MV  G +       +TSKT EE
Sbjct: 540 DAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP----DGSTSKTLEE 594



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 269/525 (51%), Gaps = 22/525 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ F   PD   +N ++  LFK G  ++   L  +M+   + P   TYN ++SG CK G 
Sbjct: 88  LDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGN 147

Query: 61  LKEAMRVVDLMTQ--NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           L++A  +++ M +   KS PD+ TYN LIN +  A  + EA   R++M++  + PDV+T 
Sbjct: 148 LEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTC 207

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N L++   + G   EA +++D +   G  P+ +T+N +I   C  GK+ +A +I++ M  
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS- 266

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
              SPD VT+NTL+D  CKAG +  A  +++ M R+ +  + IT   +++ LC   ++  
Sbjct: 267 --CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQV 324

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+ LL    ++GY  D ++Y +L+ G  +  +   A KL  EM  R        Y++++ 
Sbjct: 325 AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVS 384

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  ++G   +A ++L E++   M+P   T+N ++ G   +G + KA+   + +V + + P
Sbjct: 385 GYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVP 444

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+VT N L+ GLC+   + +A         +G   + VT  +++  LC+  R++DA+ L+
Sbjct: 445 DVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLV 504

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM  K+  P+   Y ++   L +S R+++A      M   G                 +
Sbjct: 505 VEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG-----------------V 547

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                +Y + I      GR  +A+ +++E   +G   + ST   L
Sbjct: 548 ALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 232/446 (52%), Gaps = 8/446 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYNT+++A ++  ++ E       MK  G+ P+  T NILVSG CK G ++EA+ +
Sbjct: 167 PDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M     +PDV TYN +I+  C AG + EA  + K M      PD+VT+NTL++ F +
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCK 283

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G    A ++++E+    I P+ +T+ I++   C+ G++  A  ++  +   G+ PD + 
Sbjct: 284 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +L+D  CK+G +EEA +++  M  +G +   +  ++++   C    + +A  +L    
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                    +Y  ++ G  +D   ++A+ L  ++  R  +P   TYN +I GL ++ +  
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A D+ +E+   G  P++ T  +++ G C  G+V+ A     +M  K   P++V    L+
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+   ++ A     +   +G A+D   Y  LI S+    R+ +A  +  EM  +   
Sbjct: 524 DGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFL 583

Query: 428 PDRYTY-----AAIHTALVESGRLEE 448
           PD  T      AA+  ++ E   LEE
Sbjct: 584 PDGSTSKTLEEAAMSNSVFEWTNLEE 609



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 234/471 (49%), Gaps = 23/471 (4%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           DV +YN L++    +G      ++ K++      P++VT+  LI    ++G++M A + +
Sbjct: 26  DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
             LDE  + P+    N++I    K+G  D+A K+  NME +   P+ VTYNT+I   CK+
Sbjct: 86  RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145

Query: 199 GNMEEAFRMMDVMGRKGLKM--NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           GN+E+A  +++ M RKG K   + +T NT+++      ++ EA          G   D +
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +   L++G  +D     AL++ D MK    +P   TYN++I  L  +GK  +A ++L  +
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
             S   PD  TFNT++ GFC  G + +AL+   +M  ++  PD++T  IL++GLCR G +
Sbjct: 266 SCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQV 322

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A       + +G   D + Y +L+  LCK   +E+A  L+ EM  +        Y+++
Sbjct: 323 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL 382

Query: 437 HTALVESGRLEEAQK--------------FTSIMVETGKINHQVVQPNTSKTPEEID--- 479
            +    +G + +A++              FT  +V  G I    +    S   + +    
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442

Query: 480 -PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            P  ++Y+  I+  C   R ++A  + +E   +G   N  T  +++ GL +
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCR 493



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 202/449 (44%), Gaps = 59/449 (13%)

Query: 128 SGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           S R   A +  D   E  G K +  ++N ++    K G   +  K+ +++  +G SP+ V
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLV 63

Query: 187 TYNTLIDANCKA-----------------------------------GNMEEAFRMMDVM 211
           T+  LI  NCKA                                   GN ++A ++ + M
Sbjct: 64  TFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM 123

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG--YYLDEVSYGTLITGYFRDE 269
               +K   +T NT++  LC    L++A  LL    ++G     D V+Y TLI  ++R  
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   A    ++MK   I P   T N ++ G+ + G  E+A+++L+ +  +G +PD  T+N
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           +IIH  C  G+V +A +    M   S  PD+VT N LL G C+ G+L +AL+       +
Sbjct: 244 SIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
               D +TY  L++ LC+  +++ AF LL E+  +   PD   Y ++   L +SG +EEA
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            K    M   G                      + YS  ++ +C  G    A +I  E  
Sbjct: 361 HKLVKEMSVRG-----------------CRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKAV 538
              +     TY  ++ GLIK   SISKAV
Sbjct: 404 SINMVPPLFTYNIVLGGLIK-DGSISKAV 431



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P   TYN +L  L K G +++   L+SD+  +G VP+  TYN L+ G CK   ++EA  
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M      P+  T   ++ G C  G +++A+ L  EM   +  P+VV Y +LI+   
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 527

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +S R  +A  ++D +   G+  +   +  +I      G++ +A  +   M   GF PD  
Sbjct: 528 KSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGS 587

Query: 187 TYNTLIDA 194
           T  TL +A
Sbjct: 588 TSKTLEEA 595


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 262/505 (51%), Gaps = 19/505 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++AL K GK+ +V   LS ++++G+ P+  TYN L+S Y   G ++EA  +++ M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V+TYN +ING C  G  E A  +  EM    L PD  TY +L+    + G  
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +E  K+  ++    + P+ V  + M+  + + G +DKA     +++E G  PD V Y  L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ G +  A  + + M ++G  M+ +T NTILH LC  K L EA  L N  ++R  
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  +   LI G+ +      A++L+ +MKE++I     TYN ++ G  + G  + A +
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  +++   ++P   +++ +++  CS+G + +A +  ++M+ K+ KP ++ CN ++ G C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG--PD 429
           R G       F    I +G   D ++YNTLI    +E  +  AFGL+ +MEE++ G  PD
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
            +TY +I        +++EA+     M+E G                 ++P   +Y+  I
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERG-----------------VNPDRSTYTCMI 699

Query: 490 NEHCSQGRYKDALQIFEETRQKGIA 514
           N   SQ    +A +I +E  Q+G +
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFS 724



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 234/458 (51%), Gaps = 2/458 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT++ A   KG + E  +L++ M  +G  P   TYN +++G CK G  + A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V   M ++   PD  TY  L+   C  G + E  ++  +M S  ++PD+V ++++++ 
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SG   +A    + + E G+ P+ V + I+I+ YC++G I  A  +   M + G + D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT++   CK   + EA ++ + M  + L  ++ TL  ++   C    L  A  L  
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++   LD V+Y TL+ G+ +    + A ++W +M  ++I+P+  +Y+ ++  L   G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A  + +E++   + P     N++I G+C  G       F  KM+ + F PD ++ N
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624

Query: 365 ILLSGLCREGILEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            L+ G  RE  + KA    +    +  G   D  TYN+++   C++ ++++A  +L +M 
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           E+ + PDR TY  +    V    L EA +    M++ G
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 262/545 (48%), Gaps = 20/545 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  ++  ++ ++    +  KL E  +  + ++ +G   +    N L+    ++GW++ A 
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   ++++    +V+T N+++N  C  G +E+      +++   + PD+VTYNTLI+ +
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G   EAF+L++ +   G  P   T+N +I   CK GK ++A ++   M  +G SPD 
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY +L+   CK G++ E  ++   M  + +  + +  ++++        LD+A M  NS
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G   D V Y  LI GY R    + A+ L +EM ++       TYN ++ GL +   
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  + NE+ +  + PD  T   +I G C  G ++ A++   KM EK  + D+VT N 
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G  + G ++ A + +   + K      ++Y+ L+++LC +  L +AF +  EM  K 
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----------KINHQVVQPNTSKT- 474
           + P      ++      SG   + + F   M+  G           I   V + N SK  
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640

Query: 475 ------PEE---IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                  EE   + P   +Y+  ++  C Q + K+A  +  +  ++G+  ++STY  ++N
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700

Query: 526 GLIKR 530
           G + +
Sbjct: 701 GFVSQ 705



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 172/357 (48%), Gaps = 39/357 (10%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V +++++    + G L++     + +K+ GL+P+   Y IL+ GYC+ G +  AM 
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M Q     DV TYN +++G C   ML EA +L  EM    L PD  T   LI+   
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G    A +L  ++ E  I+ + VT+N ++  + K G ID A +I  +M      P  +
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +Y+ L++A C  G++ EAFR+ D M  K +K   +  N+++   C      +    L   
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ--IMPSTFTYNAMIWG----- 299
              G+  D +SY TLI G+ R+E  ++A  L  +M+E Q  ++P  FTYN+++ G     
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671

Query: 300 -------------------------------LSQSGKTEQAIDMLNELLQSGMIPDE 325
                                          +SQ   TE A  + +E+LQ G  PD+
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE-AFRIHDEMLQRGFSPDD 727



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 184/399 (46%), Gaps = 39/399 (9%)

Query: 136 KLIDELDEH--GIKPNAVTHNIMIKWYCKEGKI-DKACKIVRNMEENGFSPDCVTYNTLI 192
           + +D+L  H    K  +++ + MI    + G++ D    ++R +  +G S   +  N+L 
Sbjct: 97  RFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIV-NSLD 155

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
                 G+ +  F ++                  + T    +KL EA+        +G+ 
Sbjct: 156 STFSNCGSNDSVFDLL------------------IRTYVQARKLREAHEAFTLLRSKGFT 197

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           +   +   LI    R      A  ++ E+    +  + +T N M+  L + GK E+    
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L+++ + G+ PD  T+NT+I  + S+G +E+A +  N M  K F P + T N +++GLC+
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK 317

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G  E+A + F   +  G + DS TY +L+   CK+  + +   + S+M  + + PD   
Sbjct: 318 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           ++++ +    SG L++A  + + + E G I                 P ++ Y+  I  +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLI-----------------PDNVIYTILIQGY 420

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           C +G    A+ +  E  Q+G A++  TY  +++GL KR+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 35/244 (14%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           ++ + +AMI  L +SG+   A   L  +++   +      N++   F + G  +      
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF--- 168

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
                     D++    + +   RE    +A    RS   KG  V     N LI SL + 
Sbjct: 169 ----------DLLIRTYVQARKLREA--HEAFTLLRS---KGFTVSIDACNALIGSLVRI 213

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
             +E A+G+  E+    +G + YT   +  AL + G++E+   F S + E G        
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG-------- 265

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + P  ++Y+  I+ + S+G  ++A ++      KG +    TY  ++NGL 
Sbjct: 266 ---------VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316

Query: 529 KRRK 532
           K  K
Sbjct: 317 KHGK 320


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 264/522 (50%), Gaps = 37/522 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++      G+L +      +M++ G +PN  TYN L+  YCK+G + EA  +
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M+     P++ +YN++ING C  G ++EA+ + +EM      PD VTYNTL+N + +
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A  +  E+  +G+ P+ VT+  +I   CK   +++A +    M   G  P+  T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLID   + G + EA+R+++ M   G   + +T N  +H  C  ++++EA  ++    
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   D VSY T+I+G+ R  + +RA ++  EM E+ + P   TY+++I GL +  +  
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A D+  E+L  G+ PDE T+ T+I+ +C EG + KAL  H++M+ K F PD VT ++L+
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GL ++    +A +     I +      VTY+TLI +              S +E K + 
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-------------CSNIEFKSV- 413

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
                  A+       G + EA +    MVE    NH+              P    Y+ 
Sbjct: 414 ------VALIKGFCMKGLMHEADRVFESMVER---NHK--------------PGEAVYNV 450

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+ HC  G    A  +++E    G   +  T + L+  L K
Sbjct: 451 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492



 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/443 (33%), Positives = 240/443 (54%), Gaps = 18/443 (4%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +++  P+V+TYN+LI G+C+ G L++      EME    LP+VVTYNTLI+ + + GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EAF L+  +   G++PN +++N++I   C+EG + +A +I+  M   GF+PD VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L++  CK GN  +A  +   M R G+  + +T   +++++C  + L+ A    +    RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +E +Y TLI G+ R    N A ++ +EM E    PS  TYNA I G     + E+A+
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            ++ E+++ G+ PD  +++TII GFC +G++++A Q   +MVEK   PD VT + L+ GL
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C    L +A    +  +  G   D  TY TLI++ C E  L  A  L  EM  K   PD 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ +   L +  R  EA++    ++                  EE  PS ++Y   I 
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIY-----------------EESVPSDVTYDTLI- 402

Query: 491 EHCSQGRYKDALQIFEETRQKGI 513
           E+CS   +K  + + +    KG+
Sbjct: 403 ENCSNIEFKSVVALIKGFCMKGL 425



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/492 (32%), Positives = 250/492 (50%), Gaps = 54/492 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+ VTYNT++DA  K G+++E   LL  M  +G+ PN  +YN++++G C+ G 
Sbjct: 36  MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA  +++ M      PD  TYN L+NG+C  G   +A  +  EM    + P VVTY  
Sbjct: 96  MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 155

Query: 121 LIN------------RFFE-----------------------SGRSMEAFKLIDELDEHG 145
           LIN             FF+                        G   EA+++++E+ E G
Sbjct: 156 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 215

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+ VT+N  I  +C   ++++A  +V+ M E G +PD V+Y+T+I   C+ G ++ AF
Sbjct: 216 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 275

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           +M   M  KG+  + +T ++++  LC  ++L EA  L       G   DE +Y TLI  Y
Sbjct: 276 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 335

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             +   N+AL L DEM  +  +P   TY+ +I GL++  +T +A  +L +L+    +P +
Sbjct: 336 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395

Query: 326 TTFNTIIH---------------GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            T++T+I                GFC +G + +A +    MVE++ KP     N+++ G 
Sbjct: 396 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 455

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G L KA   ++  I  G    +VT  TLI +L KE   E+    +SE+    L   R
Sbjct: 456 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE----MSEVIGDTLRSCR 511

Query: 431 YTYAAIHTALVE 442
              A +   LVE
Sbjct: 512 LNEAELAKVLVE 523



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 213/388 (54%), Gaps = 17/388 (4%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+NI+I+ +C  G++ K       ME NG  P+ VTYNTLIDA CK G ++EAF
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M  KG++ N I+ N I++ LC E  + EA+ +L     +G+  DEV+Y TL+ GY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++   ++AL +  EM    + PS  TY A+I  + ++    +A++  +++   G+ P+E
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+ T+I GF  +G + +A +  N+M E  F P +VT N  + G C    +E+AL   + 
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + KG A D V+Y+T+IS  C++  L+ AF +  EM EK + PD  TY+++   L E  R
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           L EA   +  M++ G                 + P   +Y+  IN +C +G    AL + 
Sbjct: 306 LTEACDLSQEMLDMG-----------------LPPDEFTYTTLINAYCVEGDLNKALHLH 348

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +E   KG   +  TY  L+NGL K+ ++
Sbjct: 349 DEMIHKGFLPDAVTYSVLINGLNKQART 376



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 163/330 (49%), Gaps = 20/330 (6%)

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M R  +  N  T N ++   C   +L +         + G   + V+Y TLI  Y +  +
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A  L   M  + + P+  +YN +I GL + G  ++A ++L E+   G  PDE T+NT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +++G+C EG   +AL  H +MV     P +VT   L++ +C+   L +A++FF    ++G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA-IHTALVESGRLEEA 449
              +  TY TLI    ++  L +A+ +L+EM E    P   TY A IH   V   R+EEA
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE-RMEEA 239

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 MVE G                 + P  +SYS  I+  C +G    A Q+ +E  
Sbjct: 240 LGVVQEMVEKG-----------------LAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +KG++ +  TY +L+ GL + R+ +++A D
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRR-LTEACD 311


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 280/568 (49%), Gaps = 75/568 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFK-KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  G +P  ++YN +LDA  + K  ++   ++  +M +  + PN  TYNIL+ G+C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ + D M     LP+V TYN LI+G+C    +++ F+L + M    L P++++YN 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN     GR  E   ++ E++  G   + VT+N +IK YCKEG   +A  +   M  +G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 181 FSPDCVTYNTLIDANCKAGN-----------------------------------MEEAF 205
            +P  +TY +LI + CKAGN                                   M EA+
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R++  M   G   + +T N +++  C   K+++A  +L    ++G   D VSY T+++G+
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R    + AL++  EM E+ I P T TY+++I G  +  +T++A D+  E+L+ G+ PDE
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+  +I+ +C EG +EKALQ HN+MVEK   PD+VT ++L++GL ++    +A +    
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +      VTY+TLI + C     +    L+                         G 
Sbjct: 581 LFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIK-------------------GFCMKGM 620

Query: 446 LEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           + EA Q F S++   GK NH+              P   +Y+  I+ HC  G  + A  +
Sbjct: 621 MTEADQVFESML---GK-NHK--------------PDGTAYNIMIHGHCRAGDIRKAYTL 662

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++E  + G  ++  T + L+  L K  K
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGK 690



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 246/453 (54%), Gaps = 18/453 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME-AFKLIDE 140
            +++++  +    ++++A  +    ++   +P V++YN +++    S R++  A  +  E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E  + PN  T+NI+I+ +C  G ID A  +   ME  G  P+ VTYNTLID  CK   
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           +++ F+++  M  KGL+ N I+ N +++ LC E ++ E   +L   ++RGY LDEV+Y T
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI GY ++   ++AL +  EM    + PS  TY ++I  + ++G   +A++ L+++   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+E T+ T++ GF  +G + +A +   +M +  F P +VT N L++G C  G +E A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
                   KG + D V+Y+T++S  C+   +++A  +  EM EK + PD  TY+++    
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            E  R +EA      M+  G                 + P   +Y+  IN +C +G  + 
Sbjct: 496 CEQRRTKEACDLYEEMLRVG-----------------LPPDEFTYTALINAYCMEGDLEK 538

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           ALQ+  E  +KG+  +  TY  L+NGL K+ ++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571



 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 243/463 (52%), Gaps = 15/463 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+ VTYNT++D   K  K+++   LL  M  +GL PN  +YN++++G C+ G 
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE   V+  M +     D  TYN LI G+C  G   +A  +  EM    L P V+TY +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G    A + +D++   G+ PN  T+  ++  + ++G +++A +++R M +NG
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSP  VTYN LI+ +C  G ME+A  +++ M  KGL  + ++ +T+L   C    +DEA 
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     ++G   D ++Y +LI G+    +   A  L++EM    + P  FTY A+I   
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  E+A+ + NE+++ G++PD  T++ +I+G   + +  +A +   K+  +   P  
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590

Query: 361 VT--------CNI-------LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT         NI       L+ G C +G++ +A + F S + K    D   YN +I   
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           C+   +  A+ L  EM +        T  A+  AL + G++ E
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 193/408 (47%), Gaps = 50/408 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +TY +++ ++ K G +N   + L  M+ +GL PN  TY  LV G+ + G++ EA
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV+  M  N   P V TYN LING C  G +E+A  + ++M+   L PDVV+Y+T+++ 
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  S    EA ++  E+ E GIKP+ +T++ +I+ +C++ +  +AC +   M   G  PD
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL----------------- 227
             TY  LI+A C  G++E+A ++ + M  KG+  + +T + ++                 
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579

Query: 228 --------------HTL-------------------CCEKKLDEAYMLLNSASKRGYYLD 254
                         HTL                   C +  + EA  +  S   + +  D
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y  +I G+ R     +A  L+ EM +   +  T T  A++  L + GK  +   ++ 
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            +L+S  + +      ++     EG ++  L    +M +  F P+ ++
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 147/462 (31%), Positives = 251/462 (54%), Gaps = 4/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     PD VT+N ++DA F+ G ++    L+  M  +GL P   TYN ++ G CK   
Sbjct: 183 MEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRR 242

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  V   M Q    PDV ++N+LI G+C  G ++EA +  KEM+   + PDVV+++ 
Sbjct: 243 FDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSC 302

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G    A   + E+   G+ P+ V + ++I  +C+ G + +A ++   M   G
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG 362

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTL++  CK   + +A ++++ M  +G+  +  T  T++H  C +   + A 
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENAL 422

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L ++  ++    D V+Y +LI G  R     +A +LWD+M  R+I+P+  TY+ +I   
Sbjct: 423 QLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSH 482

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E A   L+E+++ G +P+  T+N+II G+C  G V+K  QF  KM + +  PD+
Sbjct: 483 CEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDL 542

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLL 418
           +T N L+ G  +E  +  A   F   I++ + V  D+VTYN +I+   ++  ++DA  + 
Sbjct: 543 ITFNTLIHGYIKEENMHGAFNVFN--IMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVF 600

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             M +  + PDRYTY ++    V +G  ++A +    M+  G
Sbjct: 601 KGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG 642



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 258/503 (51%), Gaps = 17/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N ++ +  K  + +    ++S+M+K+ + P+  T+N+L+    + G +  A+ +VD M
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + TYN ++ G C     ++A  + + M+   + PDV ++N LI  F   G  
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA K   E+    + P+ V+ + +I  + + G++D A   +R M+  G  PD V Y  +
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+AG+M EA R+ D M   G   + +T NT+L+ LC + +L +A  LLN   +RG 
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ TLI GY R      AL+L+D +  +++ P   TYN++I G+ + G   +A +
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++    ++P+  T++ +I   C +GQVE A  F ++MV+K   P+I T N ++ G C
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G ++K  +F +         D +T+NTLI    KE  +  AF + + ME++ + PD  
Sbjct: 519 RSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAV 578

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  I     E G +++A +    M ++G                 I+P   +Y   IN 
Sbjct: 579 TYNMIINGFSEQGNMQDAGRVFKGMGDSG-----------------IEPDRYTYMSLING 621

Query: 492 HCSQGRYKDALQIFEETRQKGIA 514
           H + G  K A Q+ +E   +G A
Sbjct: 622 HVTAGNSKQAFQLHDEMIHRGFA 644



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 253/498 (50%), Gaps = 18/498 (3%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N L++   + GW   A     L+  + S  + +T N++++ +C     + A  +  EME 
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + PDVVT+N LI+  F +G    A  L+D +   G+KP  VT+N ++K  CK  + DK
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK 245

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A ++ R M++   +PD  ++N LI   C+ G ++EA +    M  + +  + ++ + ++ 
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIG 305

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
                 ++D A   L      G   D V Y  +I G+ R    + AL++ DEM     +P
Sbjct: 306 LFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLP 365

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
              TYN ++ GL +  +   A  +LNE+ + G+ PD  TF T+IHG+C +G  E ALQ  
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLF 425

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           + ++ +  +PD+VT N L+ G+CR+G L KA + +     +    + +TY+ LI S C++
Sbjct: 426 DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET--------- 459
            ++EDAFG L EM +K   P+  TY +I      SG +++ Q+F   M +          
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545

Query: 460 -----GKIN----HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                G I     H           E + P +++Y+  IN    QG  +DA ++F+    
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGD 605

Query: 511 KGIAINKSTYMNLMNGLI 528
            GI  ++ TYM+L+NG +
Sbjct: 606 SGIEPDRYTYMSLINGHV 623



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 226/429 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VTYN++L  L K  + ++ +++   M +  + P+  ++NIL+ G+C++G 
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGE 277

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA++    M      PDV +++ LI  +   G ++ A    +EM+ L L+PD V Y  
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I  F  +G   EA ++ DE+   G  P+ VT+N ++   CK+ ++  A K++  MEE G
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  T+ TLI   C+ GN E A ++ D + R+ L+ + +T N+++  +C +  L +A 
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKAN 457

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    R    + ++Y  LI  +    +   A    DEM ++  +P+  TYN++I G 
Sbjct: 458 ELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGY 517

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG  ++    L ++ Q  + PD  TFNT+IHG+  E  +  A    N M ++  +PD 
Sbjct: 518 CRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDA 577

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N++++G   +G ++ A + F+     G   D  TY +LI+        + AF L  E
Sbjct: 578 VTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDE 637

Query: 421 MEEKKLGPD 429
           M  +   PD
Sbjct: 638 MIHRGFAPD 646



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 177/325 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G +PD V Y  ++    + G ++E   +  +M   G +P+  TYN L++G CK   
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A ++++ M +    PD+ T+  LI+G+C  G  E A +L   +   +L PDVVTYN+
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A +L D++    I PN +T++I+I  +C++G+++ A   +  M + G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN++I   C++GN+++  + +  M +  +  + IT NT++H    E+ +  A+
Sbjct: 503 NLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAF 562

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N   K     D V+Y  +I G+        A +++  M +  I P  +TY ++I G 
Sbjct: 563 NVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGH 622

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
             +G ++QA  + +E++  G  PD+
Sbjct: 623 VTAGNSKQAFQLHDEMIHRGFAPDD 647



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 207/440 (47%), Gaps = 63/440 (14%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG---NMEEA 204
           P     +++I+ Y +  K  +A +  R + ++         N L+    +AG     +EA
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           +R+  V+     ++N  TLN ++H+ C   + D A  +++   KR  + D V++  LI  
Sbjct: 145 YRL--VLSSDS-EVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDA 201

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            FR    + A+ L D M  R + P   TYN+++ GL +  + ++A ++   + Q  + PD
Sbjct: 202 RFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPD 261

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS---------------- 368
             +FN +I GFC  G+V++A++F+ +M  +   PD+V+ + L+                 
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321

Query: 369 -------------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
                              G CR G + +AL+     +  G   D VTYNTL++ LCK+ 
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQ 468
           RL DA  LL+EMEE+ + PD  T+  +       G  E A Q F +++ +  ++   VV 
Sbjct: 382 RLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ--RLRPDVVT 439

Query: 469 PNT-----------SKTPE--------EIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            N+           +K  E        EI P+ I+YS  I+ HC +G+ +DA    +E  
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499

Query: 510 QKGIAINKSTYMNLMNGLIK 529
           +KG   N  TY +++ G  +
Sbjct: 500 KKGNLPNIRTYNSIIKGYCR 519



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/219 (20%), Positives = 90/219 (41%), Gaps = 17/219 (7%)

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++++ LL S   P    F+ +I  +    +  +A +    +++          N LL+ L
Sbjct: 73  EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVL 132

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            R G    A + +R  +     V++ T N ++ S CK    + A  ++SEME++ + PD 
Sbjct: 133 SRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDV 192

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T+  +  A   +G ++ A      M   G                 + P  ++Y+  + 
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMANRG-----------------LKPGIVTYNSVLK 235

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             C   R+  A ++F    Q  +A +  ++  L+ G  +
Sbjct: 236 GLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 276/517 (53%), Gaps = 17/517 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           + + L+A  K  + +  + +L +M+++G   N  TYN+L++G C+ G ++EA      M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
               +PD +TY  LING C +    EA  L  EM   +L P+VV Y  LI+ F   G + 
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EAFK+I E+   G++PN +T++ +++  CK G++D+A  +++ M  +   PD +TYN +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           + + +  + ++AFR++  M   G+  N  T + ++H LC   + ++A  LL   + +G  
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +   Y  LI+GY R+   + A +++D+M +  ++P  + YN++I+GLS+ G+ E++   
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
             ++ + G++P+E T++ +IHG+   G +E A Q   +M++   KP+ V    LL    +
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              +EK    F+S + +G  +D+  Y  LI +L     +E AF +LS +E+    PD + 
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y+++ + L ++   E+A      M + G                 +DP+ + Y+  I+  
Sbjct: 645 YSSLISGLCKTADREKAFGILDEMSKKG-----------------VDPNIVCYNALIDGL 687

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           C  G    A  +F     KG+  N  TY +L++G  K
Sbjct: 688 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 724



 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 258/520 (49%), Gaps = 18/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y  ++D   ++G  +E   ++ +M   G+ PN+ TY+ LV G CK+G +  A  +
Sbjct: 325 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 384

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M ++   PD  TYN++I G       ++AFRL  EME+  + P+V TY+ +I+   +
Sbjct: 385 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 444

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG   +A  L++E+   G+KPNA  +  +I  YC+EG +  AC+I   M +    PD   
Sbjct: 445 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 504

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI    K G +EE+ +    M  +GL  N  T + ++H       L+ A  L+    
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   ++V Y  L+  YF+ +   +    +  M ++ +M     Y  +I  LS SG  E
Sbjct: 565 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 624

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L+ + ++G +PD   ++++I G C     EKA    ++M +K   P+IV  N L+
Sbjct: 625 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 684

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G +  A   F S + KG   + VTY +LI   CK   + +AF L +EM    + 
Sbjct: 685 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 744

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD + Y+ + T    +G LE+A      M   G   H  +                S++ 
Sbjct: 745 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG---HASIS---------------SFNN 786

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++  C +G+ ++ L++      +G+  N  T  N+++GL
Sbjct: 787 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 826



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 275/551 (49%), Gaps = 39/551 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TYN I++  F+     +   LLS+M+  G+ PN  TY+I++ G C+ G  ++A  +
Sbjct: 395 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 454

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ MT     P+ + Y  LI+G+C  G +  A  +  +M  + +LPD+  YN+LI    +
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  E+ K   ++ E G+ PN  T++ +I  Y K G ++ A ++V+ M + G  P+ V 
Sbjct: 515 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 574

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+++  K+ ++E+       M  +G+ ++      ++H L     ++ A+ +L+   
Sbjct: 575 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   D   Y +LI+G  +     +A  + DEM ++ + P+   YNA+I GL +SG   
Sbjct: 635 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 694

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++ N +L  G++P+  T+ ++I G C  G +  A   +N+M+     PD    ++L 
Sbjct: 695 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +G    G LE+A+       L+G A  S ++N L+   CK  ++++   LL  +  + L 
Sbjct: 755 TGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLV 813

Query: 428 PDRYTYAAIHTALVESGRLEE----------------AQKFTSI---MVETGKINHQVVQ 468
           P+  T   I + L E+G+L E                A+ F+S+   M+  GKI   VV 
Sbjct: 814 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD 873

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                             + I +HC +G    AL + +    K   +  S+Y+ +++ L 
Sbjct: 874 ------------------DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLC 915

Query: 529 KRRKSISKAVD 539
           ++ K +S+A++
Sbjct: 916 RKGK-LSEALN 925



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 242/521 (46%), Gaps = 56/521 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY+ ++  L + G+  +  DLL +M  +GL PN   Y  L+SGYC+ G 
Sbjct: 423 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 482

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + D MT+   LPD++ YN LI G    G +EE+ +   +M+   LLP+  TY+ 
Sbjct: 483 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 542

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTH--------------------------- 153
           LI+ + ++G    A +L+  + + G+KPN V +                           
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602

Query: 154 --------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                    I+I      G ++ A +++  +E+NG  PD   Y++LI   CK  + E+AF
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++D M +KG+  N +  N ++  LC    +  A  + NS   +G   + V+Y +LI G 
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 722

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +    + A  L++EM    I P  F Y+ +  G S +G  EQA+ ++ E+   G     
Sbjct: 723 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASI 781

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL--------- 376
           ++FN ++ GFC  G++++ L+  + ++ +   P+ +T   ++SGL   G L         
Sbjct: 782 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 841

Query: 377 ------EKALKFFRSWIL----KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
                 E A + F S  +    +GK    V  + +I   CKE  L+ A  L   +  K  
Sbjct: 842 LQQKTSESAARHFSSLFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVIVAKSA 900

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
                +Y AI   L   G+L EA      M + G +   +V
Sbjct: 901 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLV 941



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 24/176 (13%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV---- 67
           ++N ++D   K+GK+ E   LL  +  +GLVPN  T   ++SG  + G L E   +    
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 842

Query: 68  ----------------VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
                           +D++ Q K   DV   + +I   C  G L++A  LR  + +   
Sbjct: 843 QQKTSESAARHFSSLFMDMINQGKIPLDV--VDDMIRDHCKEGNLDKALMLRDVIVAKSA 900

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKI 166
                +Y  +++     G+  EA  L+ E+D+ G ++P  V   + I W+ +   I
Sbjct: 901 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVAL-LGIFWFRRHHHI 955


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 161/522 (30%), Positives = 256/522 (49%), Gaps = 43/522 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P++VTY+ ++D   ++GKL+     L +M   GL P+   YN L++G+CK G 
Sbjct: 393 MGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGD 452

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  ++  M   K  P V TY  L+ G+C+ G + +A RL  EM    ++P + T+ T
Sbjct: 453 ISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTT 512

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  F +G   +A KL  E+ E  +KPN VT+N+MI+ YC+EG + KA + +  M E G
Sbjct: 513 LLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKG 572

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  +Y  LI   C  G   EA   +D + +   ++N I    +LH  C E KL+EA 
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      RG  LD V YG LI G  + +     L L  EM +R + P    Y +MI   
Sbjct: 633 SVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAK 692

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV------------------- 341
           S++G  ++A  + + ++  G +P+E T+  +I+G C  G V                   
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQ 752

Query: 342 -----------------EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
                            +KA++ HN ++ K    +  T N+L+ G CR+G +E+A +   
Sbjct: 753 VTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELIT 811

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             I  G + D +TY T+IS LC+   ++ A  L + M EK + PDR  Y  +      +G
Sbjct: 812 RMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            + +A +  + M+  G      ++PNT  +   I   S S S
Sbjct: 872 EMGKATELRNEMLRQG------LKPNTETSETTISNDSSSKS 907



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 268/539 (49%), Gaps = 17/539 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC  + V YN ++D L KK K+ E   +  D+  + L P+  TY  LV G CK+  
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQE 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  + ++D M + +  P     + L+ G    G +EEA  L K +    + P++  YN 
Sbjct: 313 FEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNA 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +     EA  L D + + G+ PN VT++I+I  +C+ GK+D A   +  M + G
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG 432

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P    YN+LI+ +CK G++  A  +M  M  K L+   +T  +++   C + K+++A 
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + +G      ++ TL++G FR      A+KL+ EM E  + P+  TYN MI G 
Sbjct: 493 RLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGY 552

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A + LNE+++ G++PD  ++  +IHG C  GQ  +A  F + + + + + + 
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +    LL G CREG LE+AL   +   L+G  +D V Y  LI    K +  +   GLL E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L PD   Y ++  A  ++G  +EA     +M+  G +                 P
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-----------------P 715

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           + ++Y+  IN  C  G   +A  +  + R      N+ TY   ++ L K    + KAV+
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE 774



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 240/496 (48%), Gaps = 17/496 (3%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M K  L+P   T + L+ G  K      AM + D M      PDV+ Y  +I   C    
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L  A  +  +ME+     ++V YN LI+   +  +  EA  +  +L    +KP+ VT+  
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++   CK  + +   +++  M    FSP     ++L++   K G +EEA  ++  +   G
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  N    N ++ +LC  +  DEA +L +   K G   ++V+Y  LI  + R  K + AL
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
               EM +  + PS + YN++I G  + G    A  ++ E++   + P   T+ +++ G+
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGY 482

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           CS+G++ KAL+ +++M  K   P I T   LLSGL R G++  A+K F          + 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR 542

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYN +I   C+E  +  AF  L+EM EK + PD Y+Y  +   L  +G+  EA+ F   
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           +       H+             + + I Y+  ++  C +G+ ++AL + ++   +G+ +
Sbjct: 603 L-------HK----------GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645

Query: 516 NKSTYMNLMNGLIKRR 531
           +   Y  L++G +K +
Sbjct: 646 DLVCYGVLIDGSLKHK 661


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 257/463 (55%), Gaps = 5/463 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+++ Y T++ AL +K +++E   LL +M   G +P+  T+N ++ G CK+  
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A ++VD M      PD  TY  L++G C  G L EA ++  ++      P+    NT
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNT 359

Query: 121 LINRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LIN +  SG+  EA   ++E +   G +P+  T+NI++   CKEG +  A  +V  M   
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P+ +TY  L++  CKAG +EEA  ++  M  +GL +N++  N ++  LC ++K+  A
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL+    +G   D  +Y +LI G  + ++ + A +L+  M     + +  TYN +I  
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  ++A+ ++N++L  G   D+ T+N +I  FC  G +EK L+ + +M+      D
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            ++CNI+++GLC+ G ++ A +F R  I +G   D VTYN++++ LCK  R+++A  L  
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 659

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            ++ + + PD +TY    +   + G + +A  F    +E G +
Sbjct: 660 RLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFV 702



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 259/528 (49%), Gaps = 24/528 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+  ++ AL    +++    LL DM K G VPN   Y  L+    +   + EA
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M     +PDV T+N +I+G C    + +A +L   M      PD +TY  L++ 
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV-RNMEENGFSP 183
               G+  EA K++ ++      PN    N +I  Y   G++ +A   +   M   GF P
Sbjct: 333 LCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQP 388

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN L+   CK G++  A  +++ M R+G + N IT   +++ LC    L+EA ++L
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  S RG  ++ V Y  LI    R EK + AL L  EM  +   P  FTYN++I+GL + 
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + ++A  + + +L  G + +  T+NT+IH     G  +KAL   N M+ +    D +T 
Sbjct: 509 DRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITY 568

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+   C+ G +EK L+ +   I+ G   D+++ N +I+ LCK  ++++AF  L +   
Sbjct: 569 NGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN 628

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +   PD  TY ++   L + GR++EA   F  + VE                   + P +
Sbjct: 629 RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG------------------VRPDA 670

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +Y+  I+  C +G   DA   F    + G   +  T+  L+  L+K+
Sbjct: 671 FTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQ 718



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 222/418 (53%), Gaps = 5/418 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PDN+TY  +L  L + GKLNE R +L  +      PN    N L++GY   G LKEA
Sbjct: 318 GFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEA 373

Query: 65  MRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              ++    N    PD++TYN+L++G C  G L  A  L  EM      P+V+TY  L+N
Sbjct: 374 QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVN 433

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G   EA  ++ E+   G+  N+V +N +I   C++ K+  A  ++  M   G  P
Sbjct: 434 GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP 493

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN+LI   CK   ++EAFR+   M   G   N +T NT++H L       +A  L+
Sbjct: 494 DLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV 553

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N    RG  LD+++Y  LI  + +     + L+L+++M    +   T + N MI GL + 
Sbjct: 554 NDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKV 613

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK + A + L + +  G +PD  T+N++++G C  G++++AL   +++  +  +PD  T 
Sbjct: 614 GKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           N  +S  C+EG++  A  FF   I  G    ++T+N L+ +L K+   E+ F +L E+
Sbjct: 674 NTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 251/524 (47%), Gaps = 70/524 (13%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-DL 70
            Y   ++ L   GK   +  LL  MK++G+V   + + I++  Y K G   +A+R++ D+
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 71  MTQNKSLPDVWTYNM----LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
                  P   +Y++    L+ G C                     P V T     N F+
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNC---------------------PQVAT-----NVFY 207

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +             +   G+ P   T  I++K  C   ++D AC ++R+M ++G  P+ +
Sbjct: 208 D-------------MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y TLI A  +   + EA ++++ M   G   +  T N ++H LC   K+ +A  L++  
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             RG+Y D ++YG L+ G  R  K N A K+  ++      P+    N +I G   SG+ 
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQL 370

Query: 307 EQAIDMLNE-LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           ++A   LNE ++  G  PD  T+N ++HG C EG +  A    N+M  +  +P+++T  I
Sbjct: 371 KEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAI 430

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++GLC+ G+LE+A         +G  ++SV YN LI +LC++ ++  A  LLSEM  K 
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD +TY ++   L +  R++EA +    M+  G +                  ++++Y
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV-----------------ANNVTY 533

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I+    +G ++ AL +  +   +G  ++K TY    NGLIK
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITY----NGLIK 573



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 172/333 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  PD  TYN ++  L K+G L+  RDL+++M ++G  PN  TY ILV+G CK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  V+  M+      +   YN LI   C    +  A  L  EM +    PD+ TYN+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  R  EAF+L   +   G   N VT+N +I    + G   KA  +V +M   G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D +TYN LI A CK GN+E+   + + M   GL  +TI+ N +++ LC   K+D A+
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L  A  RG+  D V+Y +++ G  +  +   AL L+D ++   + P  FTYN  I   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            + G    A       +++G +P   T+N +++
Sbjct: 681 CKEGMVNDACSFFYRGIENGFVPSNLTWNVLVY 713


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/513 (31%), Positives = 257/513 (50%), Gaps = 17/513 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F  LP   + N +L  L K G    VR   +DM   G+ P+  TYN+++   CK G 
Sbjct: 186 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ + R+   M +    PDV TYN LI+G+   G LEE   L  EM+ +  +PD++TYN 
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + +  +   AF+   E+  +G+KPN VT++ +I  +CKEG +  A K++ +M   G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY +LIDANCKAGN+ EA+++++ M + G+K+N +T   +L  LC   ++ EA 
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S  K G   ++  Y  L+ GY + E+   A+K+  +M E  I P    Y ++IWG 
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K E+   +L E+   G+  +     TII  +   G+   AL F  +M +   +  I
Sbjct: 486 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 545

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+ GLC  GI+E A+ +F   +  G   +   Y +LI  LC    +E A  L  E
Sbjct: 546 VTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDE 605

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+ + + PD   + A+    ++ G L+EA    S M E                   I+ 
Sbjct: 606 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA-----------------IEF 648

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
               Y+  ++     G    A + F E  +KGI
Sbjct: 649 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 232/449 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D   K G L EV  L ++MK  G VP+  TYN L++ YCK   
Sbjct: 256 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 315

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A      M  N   P+V TY+ LI+ +C  GM++ A +L  +M    LLP+  TY +
Sbjct: 316 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS 375

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G   EA+KL++++ + G+K N VT+  ++   CK G++ +A ++ R+M ++G
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+   Y  L+    KA  ME+A +++  M    +K + I   +I+   C ++KL+E  
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 495

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++L     RG   + V   T+I  YF+  K++ AL  + EM++  +  +  TY  +I GL
Sbjct: 496 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 555

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  E A+D    +L  G+ P+   + ++I G C    +E A +  ++M  +   PDI
Sbjct: 556 CEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDI 615

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                L+ G  + G L++AL             D   Y +L+S   +   L  A    +E
Sbjct: 616 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 675

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M EK + P+      +     + G+L+EA
Sbjct: 676 MIEKGILPEEVLCICLLREYYKRGQLDEA 704



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 210/422 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC+PD +TYN +++   K  K+    +  S+MK  GL PN  TY+ L+  +CK G 
Sbjct: 291 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A++++  M +   LP+ +TY  LI+  C AG L EA++L  +M    +  ++VTY  
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 410

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++GR +EA ++   + + GI PN   +  ++  Y K  +++ A KI++ M E  
Sbjct: 411 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD + Y ++I  +C    +EE   +++ M  +G+  N +   TI+       K  +A 
Sbjct: 471 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 530

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G     V+Y  LI G         A+  +  M    + P+   Y ++I GL
Sbjct: 531 NFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 590

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +   E A  + +E+   GM PD T F  +I G    G +++AL   ++M E + + D+
Sbjct: 591 CXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDL 650

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                L+SG  + G L +A KFF   I KG   + V    L+    K  +L++A  L +E
Sbjct: 651 HVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNE 710

Query: 421 ME 422
           ME
Sbjct: 711 ME 712



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 232/489 (47%), Gaps = 17/489 (3%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           V     +++L S + +LG L+EA      M   ++LP   + N L++    +G  +   +
Sbjct: 157 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 216

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
              +M    + P V TYN +I+   + G    + +L  ++ E G+ P+ VT+N +I  Y 
Sbjct: 217 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 276

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K G +++   +   M++ G  PD +TYN LI+  CK   M  AF     M   GLK N +
Sbjct: 277 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 336

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T +T++   C E  +  A  LL    + G   +E +Y +LI    +      A KL ++M
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            +  +  +  TY A++ GL ++G+  +A ++   +L+ G+ P++  +  ++HG+    ++
Sbjct: 397 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 456

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E A++   +M E + KPD++    ++ G C +  LE+          +G + + V   T+
Sbjct: 457 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 516

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I +  K  +  DA     EM++  +     TY  +   L E+G +E A  +   M+  G 
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG- 575

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                +QPN +            Y+  I+  C     + A ++F+E + +G+  + + + 
Sbjct: 576 -----LQPNVA-----------VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFT 619

Query: 522 NLMNGLIKR 530
            L++G +K 
Sbjct: 620 ALIDGNLKH 628



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 221/456 (48%), Gaps = 17/456 (3%)

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T+N  +     +++L + +   G+LEEA      M + + LP   + N L++R  +SG  
Sbjct: 152 TRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNG 211

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
               K  +++   GI P+  T+N+MI + CKEG ++ + ++   M E G SPD VTYN+L
Sbjct: 212 QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL 271

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID   K G++EE   + + M   G   + IT N +++  C  +K+  A+   +     G 
Sbjct: 272 IDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGL 331

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + V+Y TLI  + ++     A+KL  +M+   ++P+ FTY ++I    ++G   +A  
Sbjct: 332 KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 391

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +LN++LQ+G+  +  T+  ++ G C  G++ +A +    M++    P+      L+ G  
Sbjct: 392 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 451

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +   +E A+K  +         D + Y ++I   C +R+LE+   +L EM+ + +  +  
Sbjct: 452 KAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPV 511

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
               I  A  ++G+  +A  F   M + G                 ++ + ++Y   I+ 
Sbjct: 512 ISTTIIDAYFKAGKSSDALNFFQEMQDVG-----------------VEATIVTYCVLIDG 554

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            C  G  + A+  F      G+  N + Y +L++GL
Sbjct: 555 LCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 590



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 176/358 (49%), Gaps = 4/358 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP+  TY +++DA  K G L E   LL+DM + G+  N  TY  L+ G CK G + EA
Sbjct: 365 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 424

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V   M ++   P+   Y  L++G+  A  +E+A ++ K+M    + PD++ Y ++I  
Sbjct: 425 EEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWG 484

Query: 125 FFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              S R +E  KLI +E+   GI  N V    +I  Y K GK   A    + M++ G   
Sbjct: 485 HC-SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 543

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VTY  LID  C+AG +E A      M   GL+ N     +++  LC    ++ A  L 
Sbjct: 544 TIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLF 603

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    RG   D  ++  LI G  +      AL L   M E  I      Y +++ G SQ 
Sbjct: 604 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 663

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--VEKSFKPD 359
           G+  QA    NE+++ G++P+E     ++  +   GQ+++A++  N+M  +  SF+ D
Sbjct: 664 GELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFD 721



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 17/382 (4%)

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             +++   + + G +++A +    M      P   + N L+    K+GN +   +  + M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              G+  +  T N ++  LC E  L+ +  L     + G   D V+Y +LI GY +    
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
                L++EMK+   +P   TYN +I    +  K  +A +  +E+  +G+ P+  T++T+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I  FC EG ++ A++    M      P+  T   L+   C+ G L +A K     +  G 
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            ++ VTY  L+  LCK  R+ +A  +   M +  + P++  Y A+    +++ R+E+A K
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M E                   I P  I Y   I  HCSQ + ++   I EE + +
Sbjct: 462 ILKQMTEC-----------------NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 504

Query: 512 GIAINKSTYMNLMNGLIKRRKS 533
           GI+ N      +++   K  KS
Sbjct: 505 GISANPVISTTIIDAYFKAGKS 526



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 20/266 (7%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           E+AN     +  M+  + +P   + N ++  LS+SG  +      N+++ +G+ P   T+
Sbjct: 177 EEANEC---FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 233

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I   C EG +E + +   +M E    PD+VT N L+ G  + G LE+    F     
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 293

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D +TYN LI+  CK  ++  AF   SEM+   L P+  TY+ +  A  + G ++ 
Sbjct: 294 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 353

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A K    M  TG +                 P+  +Y+  I+ +C  G   +A ++  + 
Sbjct: 354 AIKLLXDMRRTGLL-----------------PNEFTYTSLIDANCKAGNLTEAWKLLNDM 396

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKSI 534
            Q G+ +N  TY  L++GL K  + I
Sbjct: 397 LQAGVKLNIVTYTALLDGLCKAGRMI 422



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 86/182 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G     VTY  ++D L + G +    D    M   GL PN   Y  L+ G C    
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A ++ D M      PD+  +  LI+G    G L+EA  L   M  L +  D+  Y +
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + G   +A K  +E+ E GI P  V    +++ Y K G++D+A ++   ME   
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715

Query: 181 FS 182
           +S
Sbjct: 716 YS 717


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 245/440 (55%), Gaps = 11/440 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   +++    + GK  +   ++  ++  G VP+  TYN+L+ GYCK G + +A
Sbjct: 136 GDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKA 195

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V++ M+     PDV TYN ++   C++G L+EA  +       +  PDV+TY  LI  
Sbjct: 196 LEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEA 252

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                   +A KL+DE+ + G KP+ VT+N++I   CKEG++D+A K + NM   G  P+
Sbjct: 253 TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPN 312

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N ++ + C  G   +A R++  M RKG   + +T N +++ LC ++ L  A  +L 
Sbjct: 313 VITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   + +SY  L+ G+ +++K +RA++  + M  R   P   TYN ++  L + G
Sbjct: 373 KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 432

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+++LN+L   G  P   T+NT+I G    G+ E A++   +M  K  KPDI+T +
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEME 422
            LL GL REG +++A+K F    ++G ++   +VTYN ++  LCK ++   A   L+ M 
Sbjct: 493 TLLRGLGREGKVDEAIKIFHD--MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV 550

Query: 423 EKKLGPDRYTYAAIHTALVE 442
           EK   P   TY    T L+E
Sbjct: 551 EKGCKPTEATY----TILIE 566



 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 142/405 (35%), Positives = 227/405 (56%), Gaps = 3/405 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G +PD +TYN ++    K G++++  ++L  M    + P+  TYN ++   C  G 
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGK 223

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEAM V+D   Q +  PDV TY +LI   CN   + +A +L  EM      PDVVTYN 
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + GR  EA K ++ +  +G KPN +THNI+++  C  G+   A +++ +M   G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VT+N LI+  C+   +  A  +++ M + G   N+++ N +LH  C EKK+D A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG Y D V+Y TL+T   +D K + A+++ +++  +   P   TYN +I GL
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++ GKTE A+++L E+ + G+ PD  T++T++ G   EG+V++A++  + M   S KP  
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT N ++ GLC+     +A+ F    + KG      TY  LI  +
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 248/447 (55%), Gaps = 3/447 (0%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  L  L + G+L E    L  M  QG +P+      L+ G+C+ G  K+A R+++++  
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
           + ++PDV TYN+LI G+C +G +++A  +   +E + + PDVVTYNT++    +SG+  E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKE 226

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +++D   +    P+ +T+ I+I+  C +  + +A K++  M + G  PD VTYN LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK G ++EA + ++ M   G K N IT N IL ++C   +  +A  LL+   ++G   
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
             V++  LI    R     RA+ + ++M +   +P++ +YN ++ G  Q  K ++AI+ L
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             ++  G  PD  T+NT++   C +G+V+ A++  N++  K   P ++T N ++ GL + 
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G  E A++       KG   D +TY+TL+  L +E ++++A  +  +ME   + P   TY
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETG 460
            AI   L ++ +   A  F + MVE G
Sbjct: 527 NAIMLGLCKAQQTSRAIDFLAYMVEKG 553



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 249/479 (51%), Gaps = 20/479 (4%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           NI +    + G L+E ++ ++ M     +PDV     LI G+C +G  ++A R+ + +E+
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
              +PDV+TYN LI  + +SG   E  K ++ L+   + P+ VT+N +++  C  GK+ +
Sbjct: 170 SGAVPDVITYNVLIGGYCKSG---EIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKE 226

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +++    +    PD +TY  LI+A C    + +A +++D M +KG K + +T N +++
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            +C E +LDEA   LN+    G   + +++  ++       +   A +L  +M  +   P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S  T+N +I  L +     +AID+L ++ + G +P+  ++N ++HGFC E ++++A+++ 
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             MV +   PDIVT N LL+ LC++G ++ A++       KG +   +TYNT+I  L K 
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            + E A  LL EM  K L PD  TY+ +   L   G+++EA K    M            
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL--------- 517

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                    I PS+++Y+  +   C   +   A+       +KG    ++TY  L+ G+
Sbjct: 518 --------SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 56/284 (19%)

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           F  N  +  L ++G+ E+ +  L  ++  G IPD     ++I GFC  G+ +KA +    
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           +      PD++T N+L+ G C+ G ++KAL+      +   A D VTYNT++ SLC   +
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGK 223

Query: 411 LED-----------------------------------AFGLLSEMEEKKLGPDRYTYAA 435
           L++                                   A  LL EM +K   PD  TY  
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   + + GRL+EA KF + M   G                   P+ I+++  +   CS 
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYG-----------------CKPNVITHNIILRSMCST 326

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           GR+ DA ++  +  +KG + +  T+  L+N L ++R  + +A+D
Sbjct: 327 GRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRL-LGRAID 369



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           +E   N  +      G++E+ L+F  +M+ +   PD++ C  L+ G CR G  +KA +  
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                 G   D +TYN LI   CK   ++ A  +L  M    + PD  TY  I  +L +S
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDS 221

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G+L+EA +          ++ Q+ +        E  P  I+Y+  I   C+      A++
Sbjct: 222 GKLKEAMEV---------LDRQLQR--------ECYPDVITYTILIEATCNDSGVGQAMK 264

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           + +E R+KG   +  TY  L+NG+ K
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICK 290


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 257/463 (55%), Gaps = 5/463 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+++ Y T++ AL +K +++E   LL +M   G +P+  T+N ++ G CK+  
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A ++VD M      PD  TY  L++G C  G L EA ++  ++      P+    NT
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNT 359

Query: 121 LINRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LIN +  SG+  EA   ++E +   G +P+  T+NI++   CKEG +  A  +V  M   
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P+ +TY  L++  CKAG +EEA  ++  M  +GL +N++  N ++  LC ++K+  A
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL+    +G   D  +Y +LI G  + ++ + A +L+  M     + +  TYN +I  
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  ++A+ ++N++L  G   D+ T+N +I  FC  G +EK L+ + +M+      D
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            ++CNI+++GLC+ G ++ A +F R  I +G   D VTYN++++ LCK  R+++A  L  
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 659

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            ++ + + PD +TY    +   + G + +A  F    +E G +
Sbjct: 660 RLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFV 702



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 259/528 (49%), Gaps = 24/528 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+  ++ AL    +++    LL DM K G VPN   Y  L+    +   + EA
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M     +PDV T+N +I+G C    + +A +L   M      PD +TY  L++ 
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV-RNMEENGFSP 183
               G+  EA K++ ++      PN    N +I  Y   G++ +A   +   M   GF P
Sbjct: 333 LCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQP 388

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN L+   CK G++  A  +++ M R+G + N IT   +++ LC    L+EA ++L
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  S RG  ++ V Y  LI    R EK + AL L  EM  +   P  FTYN++I+GL + 
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + ++A  + + +L  G + +  T+NT+IH     G  +KAL   N M+ +    D +T 
Sbjct: 509 DRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITY 568

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+   C+ G +EK L+ +   I+ G   D+++ N +I+ LCK  ++++AF  L +   
Sbjct: 569 NGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN 628

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +   PD  TY ++   L + GR++EA   F  + VE                   + P +
Sbjct: 629 RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG------------------VRPDA 670

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +Y+  I+  C +G   DA   F    + G   +  T+  L+  L+K+
Sbjct: 671 FTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQ 718



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 222/418 (53%), Gaps = 5/418 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PDN+TY  +L  L + GKLNE R +L  +      PN    N L++GY   G LKEA
Sbjct: 318 GFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEA 373

Query: 65  MRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              ++    N    PD++TYN+L++G C  G L  A  L  EM      P+V+TY  L+N
Sbjct: 374 QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVN 433

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G   EA  ++ E+   G+  N+V +N +I   C++ K+  A  ++  M   G  P
Sbjct: 434 GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP 493

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN+LI   CK   ++EAFR+   M   G   N +T NT++H L       +A  L+
Sbjct: 494 DLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV 553

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N    RG  LD+++Y  LI  + +     + L+L+++M    +   T + N MI GL + 
Sbjct: 554 NDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKV 613

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK + A + L + +  G +PD  T+N++++G C  G++++AL   +++  +  +PD  T 
Sbjct: 614 GKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           N  +S  C+EG++  A  FF   I  G    ++T+N L+ +L K+   E+ F +L E+
Sbjct: 674 NTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 251/524 (47%), Gaps = 70/524 (13%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-DL 70
            Y   ++ L   GK   +  LL  MK++G+V   + + I++  Y K G   +A+R++ D+
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 71  MTQNKSLPDVWTYNM----LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
                  P   +Y++    L+ G C                     P V T     N F+
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNC---------------------PQVAT-----NVFY 207

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +             +   G+ P   T  I++K  C   ++D AC ++R+M ++G  P+ +
Sbjct: 208 D-------------MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSI 254

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y TLI A  +   + EA ++++ M   G   +  T N ++H LC   K+ +A  L++  
Sbjct: 255 VYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM 314

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             RG+Y D ++YG L+ G  R  K N A K+  ++      P+    N +I G   SG+ 
Sbjct: 315 LLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQL 370

Query: 307 EQAIDMLNE-LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           ++A   LNE ++  G  PD  T+N ++HG C EG +  A    N+M  +  +P+++T  I
Sbjct: 371 KEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAI 430

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++GLC+ G+LE+A         +G  ++SV YN LI +LC++ ++  A  LLSEM  K 
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD +TY ++   L +  R++EA +    M+  G +                  ++++Y
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV-----------------ANNVTY 533

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I+    +G ++ AL +  +   +G  ++K TY    NGLIK
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITY----NGLIK 573



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 172/333 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  PD  TYN ++  L K+G L+  RDL+++M ++G  PN  TY ILV+G CK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  V+  M+      +   YN LI   C    +  A  L  EM +    PD+ TYN+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  R  EAF+L   +   G   N VT+N +I    + G   KA  +V +M   G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D +TYN LI A CK GN+E+   + + M   GL  +TI+ N +++ LC   K+D A+
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L  A  RG+  D V+Y +++ G  +  +   AL L+D ++   + P  FTYN  I   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            + G    A       +++G +P   T+N +++
Sbjct: 681 CKEGMVNDACLFFYRGIENGFVPSNLTWNVLVY 713


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 268/525 (51%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T N +L +L K  ++     +   M   G+ P+   ++ +V+ +C  G + +A
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M +    P+V TYN +I+G C  G L+EAF+ +++ME  ++ P +VTY  LIN 
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA  ++ E+ + G  PN V +N +I  YC+ G I  A +I  +M  NG SP+
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT N+LI   CK+  ME A  +++ M   G  +N  T  +++H LC + + D A + + 
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIM 396

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R +  ++     L++G  ++ K + A++LW  + E+    +T T NA+I GL ++G
Sbjct: 397 EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  +L E+L+ G++ D  ++NT+I   C EG+VE+  +   +MV +  +PD+ T N
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYN 516

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +LL GLC  G +E+A   +      G   D+ TY  +I   CK  R+E+   L  EM   
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           K+  +   Y  +  A  E+G + EA +    M   G                 I  +S +
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG-----------------IPQTSAT 619

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           YS  I+   + G    A Q+ +E R++G++ N   Y  L+ G  K
Sbjct: 620 YSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 266/507 (52%), Gaps = 17/507 (3%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           FK      V +L S +  +GL P+  T N L+S   K   +K + +V D+M      PDV
Sbjct: 138 FKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDV 197

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           + ++ ++N +C  G +++A  L ++ME + + P+VVTYN +I+   ++GR  EAF+  ++
Sbjct: 198 YLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEK 257

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           +++  +KP+ VT+ ++I    K  + D+A  I++ M + G++P+ V YNTLID  C+ GN
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           +  A ++ D M   G+  N++T N+++   C   +++ A  LL      G  +++ ++ +
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I       + + AL    EM  R   P+      ++ GL Q+GK  +AI++   LL+ G
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
              +  T N +IHG C  G  E+A +   +M+E+    D ++ N L+   C+EG +E+  
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           K     + +G   D  TYN L+  LC   ++E+A GL  E ++    PD YTY  +    
Sbjct: 498 KLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGY 557

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++ R+EE +K    MV                   +I+ +++ Y   I  +C  G  ++
Sbjct: 558 CKANRVEEGEKLFQEMVTM-----------------KIEQNAVVYGTLIRAYCENGNMRE 600

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           A ++ ++ R +GI    +TY +L++GL
Sbjct: 601 AFRLRDDMRSRGIPQTSATYSSLIHGL 627



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 164/532 (30%), Positives = 254/532 (47%), Gaps = 17/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYN I+  L K G+L+E       M+K+ + P+  TY +L++G  KL  
Sbjct: 223 MEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLER 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  ++  M+     P+   YN LI+G+C  G +  A ++R +M S  + P+ VT N+
Sbjct: 283 FDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNS 342

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + +S +   A  L++E+   G   N  T   +I   C + + D A   +  M    
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+      L+   C+ G   EA  +   +  KG   NT+T N ++H LC     +EA 
Sbjct: 403 FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAA 462

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +RG  LD +SY TLI    ++ K     KL +EM  R I P  +TYN ++ GL
Sbjct: 463 KLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGL 522

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              GK E+A  + +E  ++G  PD  T+  +I G+C   +VE+  +   +MV    + + 
Sbjct: 523 CNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNA 582

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+   C  G + +A +       +G    S TY++LI  L     ++ A  LL E
Sbjct: 583 VVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDE 642

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L P+   Y A+     + G++    K  SI+ E   IN+             + P
Sbjct: 643 MRKEGLSPNVVCYTALIGGYCKLGQM---HKVDSILQEM-SINN-------------VHP 685

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + I+Y+  IN HC  G  K A ++  E  QKGI  +  TY  L NG  K  K
Sbjct: 686 NKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGK 737



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 233/463 (50%), Gaps = 1/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+NV YNT++D   + G ++    +  DM   G+ PN  T N L+ GYCK   
Sbjct: 293 MSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQ 352

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  +++ M     + +  T+  +I+  C     + A     EM      P+      
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTL 412

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++G+  EA +L   L E G   N VT N +I   C+ G  ++A K+++ M E G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D ++YNTLI A CK G +EE F++ + M R+G++ +  T N +LH LC   K++EA 
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   K G + D  +YG +I GY +  +     KL+ EM   +I  +   Y  +I   
Sbjct: 533 GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY 592

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A  + +++   G+     T++++IHG  + G V+ A Q  ++M ++   P++
Sbjct: 593 CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+ G C+ G + K     +   +     + +TY  +I+  CK   ++ A  LL+E
Sbjct: 653 VCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNE 712

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           M +K + PD  TY A+     + G++EEA K   +M  TG I+
Sbjct: 713 MAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLM-STGGIS 754



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 203/391 (51%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+ +++  L  K + +     + +M  +   PN     +LVSG C+ G   EA+ +   +
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +     +  T N LI+G C AG  EEA +L KEM    L+ D ++YNTLI    + G+ 
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            E FKL +E+   GI+P+  T+N+++   C  GKI++A  +    ++NG  PD  TY  +
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIM 553

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CKA  +EE  ++   M    ++ N +   T++   C    + EA+ L +    RG 
Sbjct: 554 IDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
                +Y +LI G       + A +L DEM++  + P+   Y A+I G  + G+  +   
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L E+  + + P++ T+  +I+G C  G ++ A +  N+M +K   PD VT N L +G C
Sbjct: 674 ILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +EG +E+ALK        G ++D +TY TLI
Sbjct: 734 KEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 191/362 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++     ++  L + GK +E  +L   + ++G   N  T N L+ G C+ G  +EA ++
Sbjct: 405 PNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL 464

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +   + D  +YN LI   C  G +EE F+L++EM    + PD+ TYN L++    
Sbjct: 465 LKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCN 524

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  EA  L  E  ++G  P+A T+ IMI  YCK  ++++  K+ + M       + V 
Sbjct: 525 MGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVV 584

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLI A C+ GNM EAFR+ D M  +G+   + T ++++H L     +D A  LL+   
Sbjct: 585 YGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMR 644

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + V Y  LI GY +  + ++   +  EM    + P+  TY  MI G  + G  +
Sbjct: 645 KEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMK 704

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +LNE+ Q G++PD  T+N + +GFC EG++E+AL+  + M       D +T   L+
Sbjct: 705 AAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764

Query: 368 SG 369
            G
Sbjct: 765 DG 766



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 1/161 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G    + TY++++  L   G ++    LL +M+K+GL PN   Y  L+ GYCKLG 
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +   ++  M+ N   P+  TY ++ING C  G ++ A +L  EM    ++PD VTYN 
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNA 727

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK-WY 160
           L N F + G+  EA K+ D +   GI  + +T+  +I  W+
Sbjct: 728 LTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWH 768


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 277/567 (48%), Gaps = 73/567 (12%)

Query: 2   EGFGCLPDNVTYNTILDALFK-KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  G +P  ++YN +LDA  + K  ++   ++  +M +  + PN  TYNIL+ G+C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGN 220

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+R  D M +   LP+V TYN LI+G+C    +++ F L + M    L P++++YN 
Sbjct: 221 LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN     GR  E   ++ E+++ G   + VT+N +IK YCKEG   +A  +   M  +G
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 181 FSPDCVTYNTLIDANCKAGN-----------------------------------MEEAF 205
            SP  +TY +LI + CKAGN                                   M EA+
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R++  M   G   + +T N +++  C   K+ +A  +L    ++G   D VSY T+++G+
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R    + AL++  +M  + I P T TY+++I G  +  +T++A D+ +E+L+ G+ PDE
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+  +I+ +C EG ++KA+Q HN+MVEK   PD+VT ++L++GL ++    +A +    
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +      VTY+TLI + C     +    L+                         G 
Sbjct: 581 LFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIK-------------------GFCMKGM 620

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           + EA +    M+E    NH+              P   +Y+  I+ HC  G  + A  ++
Sbjct: 621 MTEADQVFESMLEK---NHK--------------PDGTAYNVMIHGHCRGGDIRKAYSLY 663

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRK 532
           +E  + G  ++  T + L+  L K  K
Sbjct: 664 KEMVKSGFLLHTVTVIALVKTLHKEGK 690



 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 159/506 (31%), Positives = 261/506 (51%), Gaps = 8/506 (1%)

Query: 37  KKQGLVPNRTTYNILVSGYCKLGW-LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           +  G +P   +YN ++    +    +  A  V   M Q++  P+V+TYN+LI G+C AG 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGN 220

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L+ A R    ME    LP+VVTYNTLI+ + +  +  + F+L+  +   G++PN +++N+
Sbjct: 221 LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   C+EG++ +   ++  M + G+S D VTYNTLI   CK GN  +A  M   M R G
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L  + IT  +++H++C    ++ A   L+    RG   +E +Y TL+ G+ +    N A 
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           ++  EM +    PS  TYNA+I G   +GK   AI +L ++ + G+ PD  +++T++ GF
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C    V++AL+   KMV K  KPD +T + L+ G C +   ++A   F   +  G   D 
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            TY  LI++ C E  L+ A  L +EM EK + PD  TY+ +   L +  R  EA++    
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK---- 511
           +     +   V      +    I+  S+     I   C +G   +A Q+FE   +K    
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSV--VSLIKGFCMKGMMTEADQVFESMLEKNHKP 638

Query: 512 -GIAINKSTYMNLMNGLIKRRKSISK 536
            G A N   + +   G I++  S+ K
Sbjct: 639 DGTAYNVMIHGHCRGGDIRKAYSLYK 664



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 242/463 (52%), Gaps = 15/463 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+ VTYNT++D   K  K+++  +LL  M  +GL PN  +YN++++G C+ G 
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE   V+  M +     D  TYN LI G+C  G   +A  +  EM    L P V+TY +
Sbjct: 291 MKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTS 350

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G    A + +D++   G+ PN  T+  ++  + ++G +++A ++++ M +NG
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FSP  VTYN LI+ +C AG M +A  +++ M  KGL  + ++ +T+L   C    +DEA 
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +G   D ++Y +LI G+    +   A  L+DEM    + P  FTY A+I   
Sbjct: 471 RVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAY 530

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  ++AI + NE+++ G++PD  T++ +I+G   + +  +A +   K+  +   P  
Sbjct: 531 CMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSD 590

Query: 361 VT--------CNI-------LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT         NI       L+ G C +G++ +A + F S + K    D   YN +I   
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGH 650

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           C+   +  A+ L  EM +        T  A+   L + G++ E
Sbjct: 651 CRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 186/370 (50%), Gaps = 15/370 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY T++D   +KG +NE   +L +M   G  P+  TYN L++G+C  G + +A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDA 434

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V++ M +    PDV +Y+ +++G+C +  ++EA R++++M +  + PD +TY++LI  
Sbjct: 435 IAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQG 494

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F E  R+ EA  L DE+   G+ P+  T+  +I  YC EG + KA ++   M E G  PD
Sbjct: 495 FCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPD 554

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT--------------- 229
            VTY+ LI+   K     EA R++  +  +    + +T +T++                 
Sbjct: 555 VVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C +  + EA  +  S  ++ +  D  +Y  +I G+ R     +A  L+ EM +   +  
Sbjct: 615 FCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLH 674

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           T T  A++  L + GK  +   ++  +L+S  + +      ++     EG ++  L    
Sbjct: 675 TVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734

Query: 350 KMVEKSFKPD 359
           +M +  F P+
Sbjct: 735 EMAKDGFLPN 744


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  271 bits (694), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/522 (30%), Positives = 264/522 (50%), Gaps = 18/522 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P++VTY+ ++D+  K+GKL+     L  M + G+      Y+ L+SG+CKLG L+ A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M  N   P+V  Y  LI+G+C  G L  AFRL  EM    + P+  T+  LI+ 
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + R  EA KL  E+ E  + PN VT+N++I+ +CKEG   +A +++  M E G  PD
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPD 564

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  LI   C  G + EA   M+ +  +  K+N +  + +LH  C E +LD+A     
Sbjct: 565 TYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACR 624

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG  +D V Y  LI G  R +     + L  +M ++ + P    Y  MI   +++G
Sbjct: 625 EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAG 684

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + A  + + ++  G +P+  T+  +I+G C  G ++KA     +M+  +  P+  T  
Sbjct: 685 NLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 744

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L  L  EG +EKA++     +L+G   ++VTYN LI   CK  R+++A  +L  M + 
Sbjct: 745 CFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDS 803

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  +Y+ I       G L+EA K    M+  G                 ++P +++
Sbjct: 804 GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG-----------------VNPDTVA 846

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           Y+  I   C  G    A ++ ++  ++G+  N++TY +L++G
Sbjct: 847 YNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 262/538 (48%), Gaps = 18/538 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC     TYN  +  L K  ++ E  ++ + +  +GL  +  TY  LV G CK+  
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +    +++ M +   +P     + L++G    G +  AF L  +++   + P +  YN 
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G+  EA  L + +   G+ PN VT++I+I  +CK GK+D A   +  M E G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                  Y++LI  +CK G +  A  + D M   GLK N +   +++   C E +L  A+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + +G   +  ++  LI+G     +   A KL+ EM E  ++P+  TYN +I G 
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G T +A ++L+E+++ G++PD  T+  +I G CS G+V +A +F N +  +  K + 
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  + LL G C+EG L+ AL   R  + +G A+D V Y+ LI  + +++       LL +
Sbjct: 601 MCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQ 660

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L PD   Y  +  A  ++G L+ A     IMV  G +                 P
Sbjct: 661 MHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCL-----------------P 703

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           + ++Y+  IN  C  G    A  +  E        N++TY   ++ L     +I KA+
Sbjct: 704 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS-EGNIEKAI 760



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 257/525 (48%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   Y  ++ +L +       R+++  M+  G   +  TYN+ + G CK   + EA
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +L++      DV TY  L+ G C     E    +  EM     +P     + L++ 
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    AF L++++ + G+ P+   +N +I   CK+GK+D+A  +  NM   G  P+
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY+ LID+ CK G ++ A   +  M   G+K      ++++   C   KL  A  L +
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + V Y +LI+GY ++ + + A +L+ EM  + I P+T+T+ A+I GL  + 
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A  +  E+++  +IP+E T+N +I G C EG   +A +  ++MVEK   PD  T  
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+SGLC  G + +A +F      + + ++ + ++ L+   CKE RL+DA     EM  +
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGR 629

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  D   Y+ +   ++        Q   SI+    +++ Q ++P+           ++ 
Sbjct: 630 GVAMDLVCYSVLIYGILRQ------QDRRSIIDLLKQMHDQGLRPD-----------NVL 672

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I+ +   G  K A  +++    +G   N  TY  L+NGL K
Sbjct: 673 YTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCK 717



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/543 (27%), Positives = 263/543 (48%), Gaps = 17/543 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D  TY T++  L K  +     +++++M + G VP+    + LV G  K G +  A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +V+ + +    P ++ YN LIN  C  G L+EA  L   M    L P+ VTY+ LI+ 
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+   A   + ++ E GIK     ++ +I  +CK GK+  A  +   M  NG  P+
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y +LI   CK G +  AFR+   M  KG+  NT T   ++  LC   ++ EA  L  
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +     +EV+Y  LI G+ ++    RA +L DEM E+ ++P T+TY  +I GL  +G
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A + +N+L       +E  F+ ++HG+C EG+++ AL    +M+ +    D+V  +
Sbjct: 580 RVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYS 639

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+ G+ R+      +   +    +G   D+V Y T+I +  K   L+ AFGL   M  +
Sbjct: 640 VLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSE 699

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ----------VVQPNTSKT 474
              P+  TY A+   L + G +++A+     M+ +  + +Q            + N  K 
Sbjct: 700 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 759

Query: 475 PEEID-------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +  D        ++++Y+  I   C  GR ++A ++       GI+ +  +Y  ++   
Sbjct: 760 IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEY 819

Query: 528 IKR 530
            +R
Sbjct: 820 CRR 822



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 250/502 (49%), Gaps = 21/502 (4%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M   G++P   T + +++G  ++   + A+ + D +  +   PDV+ Y  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
              A  +   MES      V TYN  I    ++ R  EA ++ + L   G++ +  T+  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++   CK  + +   +++  M E GF P     + L+D   K GN+  AF +++ + + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  +    N +++++C + KLDEA  L N+   +G + ++V+Y  LI  + +  K + AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
               +M E  I  + + Y+++I G  + GK   A  + +E++ +G+ P+   + ++I G+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C EG++  A + +++M  K   P+  T   L+SGLC    + +A K F   +      + 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS- 454
           VTYN LI   CKE     AF LL EM EK L PD YTY  + + L  +GR+ EA++F + 
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           +  E  K+N                   + +S  ++ +C +GR  DAL    E   +G+A
Sbjct: 591 LQGEQQKLNE------------------MCFSALLHGYCKEGRLDDALDACREMLGRGVA 632

Query: 515 INKSTYMNLMNGLIKR--RKSI 534
           ++   Y  L+ G++++  R+SI
Sbjct: 633 MDLVCYSVLIYGILRQQDRRSI 654



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 210/406 (51%), Gaps = 1/406 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+  T+  ++  L    ++ E   L  +M +  ++PN  TYN+L+ G+CK G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  ++D M +   +PD +TY  LI+G C+ G + EA     +++  +   + + ++ 
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ + + GR  +A     E+   G+  + V ++++I    ++        +++ M + G
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y T+IDAN KAGN++ AF + D+M  +G   N +T   +++ LC    +D+A 
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE 725

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +L           ++ +Y   +     +    +A++L D + E   + +T TYN +I G 
Sbjct: 726 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGF 784

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ ++A ++L  ++ SG+ PD  +++TII+ +C  G +++A++    M+ +   PD 
Sbjct: 785 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 844

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
           V  N L+ G C  G L KA +     + +G   +  TYN+LI   C
Sbjct: 845 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 17/277 (6%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           + +  LI  Y ++ +    L +   M +  I+P   T + ++ GL +  +   A+ + +E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           ++ SG+ PD   +  ++   C      +A +   +M        + T N+ + GLC+   
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           + +A++       KG   D  TY TL+  LCK    E    +++EM E    P     + 
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L + G +  A    + + + G                 + PS   Y+  IN  C  
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFG-----------------VAPSLFVYNALINSMCKD 368

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           G+  +A  +F     KG+  N  TY  L++   KR K
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 153/471 (32%), Positives = 249/471 (52%), Gaps = 6/471 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  P  VTYNT+LD+  K GK+ +  DLLS+M+++G  PN  TYN+L++G  K G 
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  ++  M +       +TYN LI G+ N GML EA  L++EM      P V TYN+
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I    + GR  +A + + ++  + + P+ V++N +I  YC+ G + KA  +   +    
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYNTL+D  C+ G +E A ++   M  +G+  + +T   +++  C    L  A 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +     G  LD  +Y T I G  +    +RA  L +EM  +   P    YN ++ GL
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A ++L +++  G+IPD  T+ +IIH     G++ K  +   +M+ K   P +
Sbjct: 525 CKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSV 584

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+ G   +G LE+A  +F     KG   + +TYN+LI+ LCK RR++ A+   +E
Sbjct: 585 VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE 644

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           M EK + P++Y+Y  +       G  +EA      M++ G      VQP++
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG------VQPDS 689



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 247/459 (53%), Gaps = 6/459 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P++VTYN +++ L KKG+  + + L+ +M K GL  +  TYN L+ GY   G 
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ + + M    + P V TYN  I G C  G + +A +   +M +  LLPDVV+YNT
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  +   G  M+AF L DEL    + P  VT+N ++   C++G+++ A ++   M   G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE-- 238
            +PD VTY  L++ +CK G++  A    D M  +GL++++    T    +  E KL +  
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT---RIVGELKLGDTS 496

Query: 239 -AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A+ L      +G+  D + Y  ++ G  +      A +L  +M    ++P   TY ++I
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               ++G+  +  ++  E+L  G+ P   T+  +IHG   +G++E+A  + ++M EK   
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+++T N L++GLC+   +++A  FF   + KG   +  +Y  LI+  C     ++A  L
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
             +M ++ + PD  T++A+   L +  +L+  ++  S++
Sbjct: 677 YKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 250/522 (47%), Gaps = 17/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    N IL  L  K  +++  ++   M + G+ P   TYN L+  YCK G +++ + +
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDL 256

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +    P+  TYN+LING    G  E+A  L  EM    L     TYN LI  +F 
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN 316

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA  L +E+   G  P   T+N  I   CK G++  A + + +M  N   PD V+
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVS 376

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI   C+ GN+ +AF + D +    L    +T NT+L  LC + +L+ A  L     
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 436

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D V+Y  L+ G  +    + A + +DEM    +   ++ Y   I G  + G T 
Sbjct: 437 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +  E+L  G  PD   +N ++ G C  G +E+A +   KMV     PD VT   ++
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                 G L K  + F   + KG     VTY  LI     + RLE AF   SEM+EK + 
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  TY ++   L +  R+++A  F + MVE G                 I P+  SY+ 
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG-----------------IFPNKYSYTI 659

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            INE+C+ G +++AL ++++   +G+  +  T+  L+  L K
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 239/484 (49%), Gaps = 17/484 (3%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           ++L+  Y K   +++ + V D M +++  PDV   N ++    +  ++ +A  + + M  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + P +VTYNTL++ + + G+  +   L+ E+   G  PN VT+N++I    K+G+ ++
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  ++  M + G      TYN LI      G + EA  + + M  KG      T N+ ++
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   ++ +A   L+         D VSY TLI GY R     +A  L+DE++   + P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN ++ GL + G+ E A  +  E++  G+ PD  T+  +++G C  G +  A +F 
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M+ +  + D       + G  + G   +A       + KG   D + YN ++  LCK 
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
             LE+A  LL +M    + PD  TY +I  A +E+GRL + ++    M+  G        
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-------- 579

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + PS ++Y+  I+ H  +GR + A   F E ++KGI  N  TY +L+NGL 
Sbjct: 580 ---------LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 529 KRRK 532
           K R+
Sbjct: 631 KVRR 634



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 1/313 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  VTYNT+LD L ++G+L   + L  +M  +G+ P+  TY ILV+G CK+G L  A  
Sbjct: 406 FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
             D M       D + Y   I G    G    AF L++EM +    PD++ YN +++   
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   EA +L+ ++   G+ P+ VT+  +I  + + G++ K  +I   M   G +P  V
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY  LI  +   G +E AF     M  KG+  N IT N++++ LC  +++D+AY      
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++G + ++ SY  LI           AL L+ +M +R + P + T++A++  L +  K 
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705

Query: 307 EQAIDMLNELLQS 319
            QA+  L  LL S
Sbjct: 706 -QAVRQLESLLDS 717


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 276/537 (51%), Gaps = 35/537 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT++T+L  L  + +++E       + K    PN   +  L++G C+ G + E
Sbjct: 140 LGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVE 195

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLI 122
           A+ ++D M ++   P+  TY  +++G C  G    A  L ++ME + ++ P+VV Y+ +I
Sbjct: 196 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAII 255

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +  ++ GR  +A  L  E+ E GI PN  T+N MI  +C  G+  +A +++R M E   S
Sbjct: 256 DGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMS 315

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT++ LI+A  K G   EA  + + M  +G+  NTIT N+++     + +LD A  +
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   D +++  LI GY   ++ +  +KL  EM  R ++ +T TY  +I G  Q
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS------- 355
            G    A+D+L E++ SG+ P+  T NT++ G C+ G+++ AL+   K+++KS       
Sbjct: 436 LGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF-KVMQKSKMDLDAS 494

Query: 356 -----FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                 +PD+ T NIL+ GL  EG   +A + +     +G   D++TYN++I  LCK+ R
Sbjct: 495 HPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  +   M  K   PD  T+  +     + GR+ +  +   +  E G+         
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLE---VFCEMGR--------- 602

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  I  ++I+Y   I+  C  G    AL IF+E    G+  +  T  N++ GL
Sbjct: 603 -----RGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 248/491 (50%), Gaps = 47/491 (9%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ + + T+++ L ++G++ E   LL  M + GL PN+ TY  +V G CK+G    A+
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 66  RVVDLM-----------------------------------TQNKSL-PDVWTYNMLING 89
            ++  M                                    Q K + P+++TYN +ING
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +C++G   EA RL +EM   K+ PDVVT++ LIN   + G+  EA +L +E+   GI PN
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            +T+N MI  + K+ ++D A ++   M   G SPD +T++ LID  C A  +++  +++ 
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M R+GL  NTIT  T++H  C    L+ A  LL      G   + V+  TL+ G   + 
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472

Query: 270 KANRALKLWDEMKERQ-----------IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
           K   AL+++  M++ +           + P   TYN +I GL   GK  +A ++  E+  
Sbjct: 473 KLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH 532

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G++PD  T+N++I G C + ++++A Q  + M  K F PD+VT   L++G C+ G +  
Sbjct: 533 RGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGD 592

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
            L+ F     +G   +++TY TLI   C+   +  A  +  EM    + PD  T   + T
Sbjct: 593 GLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLT 652

Query: 439 ALVESGRLEEA 449
            L     L+ A
Sbjct: 653 GLWSKEELKRA 663



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 251/535 (46%), Gaps = 33/535 (6%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +  +L  + +  + + V  L   M+ + +  N  ++ IL+  +C    L  A+ 
Sbjct: 73  LPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALS 132

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    P + T++ L++G C    + EA     ++      P+V+ + TL+N   
Sbjct: 133 TFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLC 188

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++PN +T+  ++   CK G    A  ++R MEE +   P+ 
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNV 248

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID   K G   +A  +   M  KG+  N  T N +++  C   +  EA  LL  
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V++  LI    ++ K   A +L++EM  R I+P+T TYN+MI G S+  +
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A  M   +   G  PD  TF+ +I G+C   +V+  ++  ++M  +    + +T   
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C+ G L  AL   +  I  G   + VT NTL+  LC   +L+DA  +   M++ K
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 426 LG-----------PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           +            PD  TY  +   L+  G+  EA++    M   G +            
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLV------------ 536

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P +I+Y+  I+  C Q R  +A Q+F+    KG + +  T+  L+NG  K
Sbjct: 537 -----PDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 206/420 (49%), Gaps = 46/420 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y+ I+D L+K G+  + ++L S+M+++G+ PN  TYN +++G+C  G   EA R+
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP-------------- 113
           +  M + K  PDV T+++LIN     G   EA  L  EM    ++P              
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365

Query: 114 ---------------------DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                                DV+T++ LI+ +  + R  +  KL+ E+   G+  N +T
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +  +I  +C+ G ++ A  +++ M  +G  P+ VT NTL+D  C  G +++A  M  VM 
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485

Query: 213 RKGLKMNTI-----------TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           +  + ++             T N ++  L  E K  EA  L      RG   D ++Y ++
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSV 545

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G  +  + + A +++D M  +   P   T+  +I G  + G+    +++  E+ + G+
Sbjct: 546 IDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGI 605

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           + +  T+ T+IHGFC  G +  AL    +M+     PD +T   +L+GL  +  L++A++
Sbjct: 606 VANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 256/517 (49%), Gaps = 29/517 (5%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT------QNKSLP- 78
           L++  DL   M +   +P        V  +CKL  +   M   D++       + + +P 
Sbjct: 57  LDDAIDLFGYMVRSRPLP-------CVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           +++++ +LI  +C+   L  A     ++  L   P +VT++TL++      R  EA    
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++     KPN +    ++   C+EG++ +A  ++  M E+G  P+ +TY T++D  CK 
Sbjct: 170 HQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 199 GNMEEAF---RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           G+   A    R M+ + R  +K N +  + I+  L  + +  +A  L +   ++G   + 
Sbjct: 226 GDTVSALNLLRKMEEVSR--IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNL 283

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
            +Y  +I G+    + + A +L  EM ER++ P   T++ +I  L + GK  +A ++ NE
Sbjct: 284 FTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNE 343

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +L  G+IP+  T+N++I GF  + +++ A +    M  K   PD++T +IL+ G C    
Sbjct: 344 MLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKR 403

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           ++  +K       +G   +++TY TLI   C+   L  A  LL EM    + P+  T   
Sbjct: 404 VDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNT 463

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L  +G+L++A +   +M +  K++     P       +++P   +Y+  I    ++
Sbjct: 464 LLDGLCNNGKLKDALEMFKVM-QKSKMDLDASHPFN-----DVEPDVQTYNILICGLINE 517

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           G++ +A +++EE   +G+  +  TY ++++GL K+ +
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 171/352 (48%), Gaps = 46/352 (13%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT++ +++AL K+GK  E  +L ++M  +G++PN  TYN ++ G+ K   L  A R+
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM      PDV T+++LI+G+C A  +++  +L  EM    L+ + +TY TLI+ F +
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-------- 179
            G    A  L+ E+   G+ PN VT N ++   C  GK+  A ++ + M+++        
Sbjct: 436 LGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495

Query: 180 --------------------------------------GFSPDCVTYNTLIDANCKAGNM 201
                                                 G  PD +TYN++ID  CK   +
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           +EA +M D MG KG   + +T  T+++  C   ++ +   +     +RG   + ++Y TL
Sbjct: 556 DEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL 615

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           I G+ +    N AL ++ EM    + P T T   M+ GL    + ++A+  L
Sbjct: 616 IHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 126/250 (50%), Gaps = 11/250 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + + +TY T++    + G LN   DLL +M   G+ PN  T N L+ G C  G LK+A
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477

Query: 65  MRVVDLMTQNK-----------SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           + +  +M ++K             PDV TYN+LI G  N G   EA  L +EM    L+P
Sbjct: 478 LEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVP 537

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D +TYN++I+   +  R  EA ++ D +   G  P+ VT   +I  YCK G++    ++ 
Sbjct: 538 DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G   + +TY TLI   C+ GN+  A  +   M   G+  +TIT+  +L  L  +
Sbjct: 598 CEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 657

Query: 234 KKLDEAYMLL 243
           ++L  A   L
Sbjct: 658 EELKRAVQCL 667



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 144/300 (48%), Gaps = 22/300 (7%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           K LD+A  L     +       + +  L+    R E+ +  + L  +M+ R+I  + +++
Sbjct: 55  KGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSF 114

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             +I       K   A+    ++ + G  P   TF+T++HG C E +V +AL F +++  
Sbjct: 115 TILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC- 173

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              KP+++    L++GLCREG + +A+      +  G   + +TY T++  +CK      
Sbjct: 174 ---KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 230

Query: 414 AFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           A  LL +MEE  ++ P+   Y+AI   L + GR  +AQ   S M E G            
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG------------ 278

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P+  +Y+  IN  CS GR+ +A ++  E  ++ ++ +  T+  L+N L+K  K
Sbjct: 279 -----ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 153/471 (32%), Positives = 249/471 (52%), Gaps = 6/471 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  P  VTYNT+LD+  K GK+ +  DLLS+M+++G  PN  TYN+L++G  K G 
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  ++  M +       +TYN LI G+ N GML EA  L++EM      P V TYN+
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I    + GR  +A + + ++  + + P+ V++N +I  YC+ G + KA  +   +    
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYNTL+D  C+ G +E A ++   M  +G+  + +T   +++  C    L  A 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +     G  LD  +Y T I G  +    +RA  L +EM  +   P    YN ++ GL
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A ++L +++  G+IPD  T+ +IIH     G++ K  +   +M+ K   P +
Sbjct: 525 CKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSV 584

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+ G   +G LE+A  +F     KG   + +TYN+LI+ LCK RR++ A+   +E
Sbjct: 585 VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE 644

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           M EK + P++Y+Y  +       G  +EA      M++ G      VQP++
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG------VQPDS 689



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 250/522 (47%), Gaps = 17/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    N IL  L  K  +++  ++   M + G+ P   TYN L+  YCK G +++ + +
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDL 256

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +    P+  TYN+LING    G  E+A  L  EM    L     TYN LI  +F 
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN 316

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA  L +E+   G  P   T+N  I   CK G++  A + + +M  N   PD V+
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVS 376

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI   C+ GN+ +AF + D +    L    +T NT+L  LC + +L+ A  L     
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 436

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D V+Y  L+ G  +    + A + +DEM    +   ++ Y   I G  + G T 
Sbjct: 437 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +  E+L  G  PD   +N ++ G C  G +E+A +   KMV     PD VT   ++
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                 G L K  + F   + KG     VTY  LI     + RLE AF   SEM+EK + 
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  TY ++   L +  R+++A  F + MVE G                 I P+  SY+ 
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG-----------------IFPNKYSYTI 659

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            INE+C+ G +++AL ++++   +G+  +  T+  L+  L K
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 247/515 (47%), Gaps = 47/515 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY----- 55
           M+  GC P++VTYN +++ L KKG+  + + L+ +M K GL  +  TYN L+ GY     
Sbjct: 260 MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGM 319

Query: 56  ------------------------------CKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                         CKLG + +AM+ +  M  N  LPDV +YN 
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI G+C  G L +AF L  E+ S+ L P +VTYNTL++     G    A +L  E+   G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I P+ VT+ I++   CK G +  A +    M   G   D   Y T I    K G+   AF
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + + M  KG   + I  N ++  LC    L+EA  LL      G   D V+Y ++I  +
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             + +  +  +++ EM  + + PS  TY  +I G +  G+ E+A    +E+ + G++P+ 
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNV 619

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N++I+G C   ++++A  F  +MVEK   P+  +  IL++  C  G  ++AL  ++ 
Sbjct: 620 ITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQ 679

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + +G   DS T++ L+  L K+ +L+   G  S M   K+     T  A  TAL     
Sbjct: 680 MLDRGVQPDSCTHSALLKQLGKDCKLQAVHG-TSTMPTAKVDLLSQTVGAA-TALTS--- 734

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
                   S + E G I  + ++ N     + +DP
Sbjct: 735 -------VSSIAENGHITKEQLRQNIPTKKQFVDP 762



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 239/484 (49%), Gaps = 17/484 (3%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           ++L+  Y K   +++ + V D M +++  PDV   N ++    +  ++ +A  + + M  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + P +VTYNTL++ + + G+  +   L+ E+   G  PN VT+N++I    K+G+ ++
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  ++  M + G      TYN LI      G + EA  + + M  KG      T N+ ++
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   ++ +A   L+         D VSY TLI GY R     +A  L+DE++   + P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN ++ GL + G+ E A  +  E++  G+ PD  T+  +++G C  G +  A +F 
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M+ +  + D       + G  + G   +A       + KG   D + YN ++  LCK 
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
             LE+A  LL +M    + PD  TY +I  A +E+GRL + ++    M+  G        
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-------- 579

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + PS ++Y+  I+ H  +GR + A   F E ++KGI  N  TY +L+NGL 
Sbjct: 580 ---------LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 529 KRRK 532
           K R+
Sbjct: 631 KVRR 634


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 164/543 (30%), Positives = 286/543 (52%), Gaps = 24/543 (4%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C P  ++Y+ I+D L K  + +E R+L  +MK QG++P+  +Y  L+ G+C  G  +
Sbjct: 158 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWE 217

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A  + + M      PDV T  +LI+ +C  G + EA  L + M     + D+VTY+TLI
Sbjct: 218 KAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLI 277

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-- 180
                  R  EA +L   + + G +P+A+ +  ++K  C+ GKI+ A  + + M  +   
Sbjct: 278 KGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQ 337

Query: 181 -----FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
                  PD  T + LID  CK G + EA  +++VM ++G  ++ +T +T++  LC E +
Sbjct: 338 YGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 397

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER------QIMPS 289
           + EA  L  S  K G   D ++YGTL+ G  +    N AL+L  EM         +  P+
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             +Y+ +I GL +  + ++A ++  E+   G++PD  ++ T+IHGFC  G+ EKA    N
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M++   +PD+ T ++L+  LC++G + +A K     I +G  +D VT  TL+  LC + 
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+  A  L  +M++    P+  T A +   L +SG ++ A +            H+ +  
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL-----------HKNMLS 626

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +TS       P++ISYS  I+  C  GR  +A ++F+E +  G+  +  +Y +L++G  +
Sbjct: 627 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 686

Query: 530 RRK 532
             K
Sbjct: 687 SGK 689



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 278/543 (51%), Gaps = 24/543 (4%)

Query: 3   GFGCL-PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           G  C+ PD  T + ++D L K+GK+ E  +LL  M ++G + +  TY+ L+ G C    +
Sbjct: 339 GIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 398

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPDV 115
            EA  +   M +    PD  TY  L+ G C  G +  A +L +EM        +K  P +
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTL 458

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           ++Y+ +I+   +  R  EA +L +E+   GI P+ +++  +I  +C  GK +KA  +   
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 518

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M + G  PD  T + LID  CK G + EA ++++V+ ++G  ++ +T  T++  LC + +
Sbjct: 519 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHR 578

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER------QIMPS 289
           + +A  L     K G   + V+  TL+ G  +      AL+L   M            P+
Sbjct: 579 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             +Y+ +I GL + G+ ++A ++  E+   G+IPD  ++ ++IHGFC  G+ + A    N
Sbjct: 639 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 698

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +MV+   +PD+ T ++L+  LC+EG + +A +     I +G   ++VTY TL+  LC   
Sbjct: 699 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 758

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+ +A  L  +M++    PD  TY  +   L ++G ++ A +            H+ +  
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL-----------HKKMLS 807

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +T +      P  ISYS  I+  C  GR  +A ++F+E +  G+  N  +Y +L++G  +
Sbjct: 808 DTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCR 867

Query: 530 RRK 532
             K
Sbjct: 868 SGK 870



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 276/550 (50%), Gaps = 39/550 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T + ++D L K+GK+ E  +LL  M ++G + +  TY+ L+ G C    + EA  +
Sbjct: 52  PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPDVVTYNTL 121
              M +    PD  TY  L+ G C  G +  A +L +EM        +K  P +++Y+ +
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+   +  R  EA +L  E+   G+ P+ +++  +I  +C  GK +KA  +   M + G 
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGI 231

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD  T   LID  CK G + EA  +++VM  +G  ++ +T +T++  LC + ++ EA  
Sbjct: 232 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQ 291

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE-------RQIMPSTFTYN 294
           L  S  K G   D ++YGTL+ G  +  K N AL L  EM         + I P   T +
Sbjct: 292 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSS 351

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I  L + GK  +A ++L  ++Q G I D  T++T+I G C E ++ +A      M + 
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWI-------LKGKAVDSVTYNTLISSLCK 407
             +PD +T   L+ GLC+ G +  AL+  +  +       +K K    ++Y+ +I  LCK
Sbjct: 412 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT-LISYSIIIDGLCK 470

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           +RR ++A  L  EM+ + + PD  +Y  +      SG+ E+A+   + M++ G      +
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG------I 524

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           QP+ + +           S  I+  C +G+  +A ++ E   Q+G  ++  T   L+ GL
Sbjct: 525 QPDVTTS-----------SVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573

Query: 528 IKRRKSISKA 537
             + + ISKA
Sbjct: 574 CMKHR-ISKA 582



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 163/553 (29%), Positives = 273/553 (49%), Gaps = 36/553 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD ++Y +++      GK  + + L ++M   G+ P+ TT  +L+  +CK G 
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  ++++M     + D+ TY+ LI G C    + EA +L   M+ L   PD + Y T
Sbjct: 251 VIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGT 310

Query: 121 LINRFFESGRSMEAFKLIDEL----DEHGIK---PNAVTHNIMIKWYCKEGKIDKACKIV 173
           L+    ++G+   A  L  E+     ++GIK   P+  T +++I   CKEGK+ +A +++
Sbjct: 311 LMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELL 370

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M + G   D VTY+TLI   C    + EA  +   M + G + + IT  T++  LC  
Sbjct: 371 EVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQT 430

Query: 234 KKLDEAYML----LNSASKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             ++ A  L    LN   + G       +SY  +I G  +D + + A +L++EMK + IM
Sbjct: 431 GNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIM 490

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P   +Y  +I G   SGK E+A  + NE+L  G+ PD TT + +I   C +G+V +A + 
Sbjct: 491 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 550

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              ++++    D+VTC  L+ GLC +  + KA + F      G   + VT  TL+  LC+
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610

Query: 408 ERRLEDAFGLLSEM--EEKKLG----PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
              ++ A  L   M  +    G    P+  +Y+ I   L + GR +EA++    M   G 
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           I                 P  ISY+  I+  C  G++KDA  +F E    G+  + +T+ 
Sbjct: 671 I-----------------PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 522 NLMNGLIKRRKSI 534
            L++ L K  K I
Sbjct: 714 VLIDMLCKEGKVI 726



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 35/520 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEV----RDLLSDMKKQGLV--PNRTTYNILVSG 54
           M+  GC PD +TY T++  L + G +N      +++L+D  + G+   P   +Y+I++ G
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            CK     EA  + + M     +PDV +Y  LI+G+C +G  E+A  L  EM  + + PD
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V T + LI+   + G+ +EA KL++ + + G   + VT   ++K  C + +I KA ++  
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL 587

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFR----MMDVMGRKGL--KMNTITLNTILH 228
            M++ G  P+ VT  TL+   C++GN++ A      M+      G+  K N I+ + I+ 
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 647

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   + DEA  L       G   D +SY +LI G+ R  K   A  L++EM +  + P
Sbjct: 648 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 707

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
              T++ +I  L + GK  +A ++L  ++Q G IP+  T+ T++ G C   ++ +A Q  
Sbjct: 708 DVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLF 767

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV------DSVTYNTLI 402
            KM +    PD+VT   L+ GLC+ G ++ AL+  +  +            D ++Y+ +I
Sbjct: 768 MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 827

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             LCK  R ++A  L  EM+   + P+  +Y ++      SG+LE+A+   + MV+ G  
Sbjct: 828 DGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG-- 885

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
               VQ N           +++YS  I+  C +G+   AL
Sbjct: 886 ----VQLN-----------AVTYSVMIHGFCKEGQIDKAL 910



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 248/514 (48%), Gaps = 33/514 (6%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY---------NML 86
           M+  GL P+  T+NIL++  C +  + E +  +  + +   +PD+ TY         +ML
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           I+  C  G + EA  L + M     + D+VTY+TLI       R  EA  L   + + G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENG-----FSPDCVTYNTLIDANCKAGN 200
           +P+A+T+  ++K  C+ G I+ A ++ + M  + G       P  ++Y+ +ID  CK   
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
            +EA  +   M  +G+  + I+  +++H  C   K ++A  L N     G   D  + G 
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI  + ++ K   A +L + M  R  +    TY+ +I GL    +  +A  +   + + G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-------KSFKPDIVTCNILLSGLCRE 373
             PD   + T++ G C  G++  AL  H +M+        K  +PD+ T ++L+  LC+E
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G + +A +     I +G  +D VTY+TLI  LC E R+ +A  L   M++    PD  TY
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +   L ++G +  A +            HQ +  +T +   +  P+ ISYS  I+  C
Sbjct: 421 GTLMKGLCQTGNINIALQL-----------HQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              R  +A ++FEE + +GI  +  +Y  L++G 
Sbjct: 470 KDRREDEARELFEEMKAQGIMPDVISYTTLIHGF 503



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 238/434 (54%), Gaps = 14/434 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD ++Y T++      GK  + + L ++M   G+ P+ TT ++L+   CK G 
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++++++ Q   + DV T   L+ G C    + +A +L  +M+ L  +P+VVT  T
Sbjct: 544 VIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 603

Query: 121 LINRFFESGRSMEAFKL----IDELDEHGI--KPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           L+    +SG    A +L    + +   +GI  KPNA++++I+I   CK G+ D+A ++ +
Sbjct: 604 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 663

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M+  G  PD ++Y +LI   C++G  ++A  + + M   G++ +  T + ++  LC E 
Sbjct: 664 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 723

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K+ EA  LL    +RG   + V+Y TL+ G   +++ + A +L+ +M++   +P   TY 
Sbjct: 724 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYG 783

Query: 295 AMIWGLSQSGKTEQAID----MLNELLQSG--MIPDETTFNTIIHGFCSEGQVEKALQFH 348
            ++ GL Q+G  + A++    ML++  Q G    PD  +++ II G C  G+ ++A +  
Sbjct: 784 TLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF 843

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            +M      P++++   L+ G CR G LE A   F   + +G  +++VTY+ +I   CKE
Sbjct: 844 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKE 903

Query: 409 RRLEDAFGLLSEME 422
            +++ A  L  +ME
Sbjct: 904 GQIDKA--LFQKME 915


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 243/447 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC+PD ++Y+T+++   + G+L  V  L+ +M+ +GL PN  TYN ++   CK G 
Sbjct: 279 MELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 338

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA RV+  M      PD   Y  LI+G+C  G +  A+RL  EM+  K+ PD +TY  
Sbjct: 339 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTA 398

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    ++GR MEA KL  E+    ++P+ VT+  +I  YCKEGK+ +A  +   M + G
Sbjct: 399 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 458

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY  L D  CK G ++ A  ++  M RKGL++N  T N++++ LC    +D+A 
Sbjct: 459 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAV 518

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+      G++ D V+Y TL+  Y +  +  RA +L  +M +R++ P+  T+N ++ G 
Sbjct: 519 KLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGF 578

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG  E    +L  +L+ G++P+ TT+N++I  +C    +    + +  M  K   PD 
Sbjct: 579 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 638

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NIL+ G C+   +++A    R  + KG  +   +YN LI    K ++  +A  L  +
Sbjct: 639 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 698

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLE 447
           M  + L  DR  Y        + G++E
Sbjct: 699 MRREGLVADREIYNIFADINYDEGKME 725



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 234/458 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   +  +YN I  +L + G++ E   LL  M+ +G +P+  +Y+ +++GYC++G L+  
Sbjct: 248 GVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRV 307

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M      P+ +TYN +I   C  G + EA R+ +EM S  + PD V Y TLI+ 
Sbjct: 308 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 367

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G    A++L DE+ +  I P+ +T+  +I   C+ G++ +A K+   M      PD
Sbjct: 368 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  LID  CK G M+EAF + + M + GL  N +T   +   LC   ++D A  LL+
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G  L+  +Y +L+ G  +    ++A+KL  +M+     P   TY  ++    +S 
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A ++L ++L   + P   TFN +++GFC  G +E   +    M+EK   P+  T N
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+   C    +    + +R    KG   D  TYN LI   CK R +++A+ L  +M  K
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 667

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
                  +Y A+     +  +  EA++    M   G +
Sbjct: 668 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 705



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 263/548 (47%), Gaps = 53/548 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK-LGWLKEAMRV 67
           D   ++     L + G L+E R L   M   GL+ +  + N+ +S   + L  +K A++V
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
                +     +  +YN++ +  C  G + EA +L  +ME    +PDV++Y+T+IN + +
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G      KLI+E+   G+KPN  T+N +I   CK GK+ +A +++R M   G +PD V 
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLID  CK GN+  A+R+ D M ++ +  + IT   ++  LC   ++ EA  L +   
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST----------------- 290
            +    DEV+Y  LI GY ++ K   A  L ++M +  + P+                  
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480

Query: 291 ------------------FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
                             +TYN+++ GL ++G  +QA+ ++ ++  +G  PD  T+ T++
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
             +C   ++ +A +   +M+++  +P +VT N+L++G C  G+LE   K  +  + KG  
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 600

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            ++ TYN+LI   C    +     +   M  K + PD  TY  +     ++  ++EA   
Sbjct: 601 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 660

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              MV  G                  + +  SY+  I     + ++ +A ++FE+ R++G
Sbjct: 661 HRDMVGKG-----------------FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703

Query: 513 IAINKSTY 520
           +  ++  Y
Sbjct: 704 LVADREIY 711



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 236/453 (52%), Gaps = 22/453 (4%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME-AFKL 137
           D   +++       AGML+EA +L  +M +  LL  V + N  I+   E    ++ A K+
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
             E  E G+  N  ++NI+    C+ G++ +A +++  ME  G  PD ++Y+T+I+  C+
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G ++   ++++ M  KGLK N  T N ++  LC   K+ EA  +L      G   D V 
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI G+ +    + A +L+DEM++R+I P   TY A+I GL Q+G+  +A  + +E++
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
              + PDE T+  +I G+C EG++++A   HN+M++    P+IVT   L  GLC+ G ++
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A +       KG  ++  TYN+L++ LCK   ++ A  L+ +ME     PD  TY  + 
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
            A  +S  +  A +    M++                  E+ P+ ++++  +N  C  G 
Sbjct: 541 DAYCKSREMVRAHELLRQMLD-----------------RELQPTVVTFNVLMNGFCMSGM 583

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +D  ++ +   +KGI  N +TY    N LIK+
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTY----NSLIKQ 612



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 196/425 (46%), Gaps = 35/425 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y T++D   K G ++    L  +M+K+ + P+  TY  ++ G C+ G + EA
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 412

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   M   +  PD  TY  LI+G+C  G ++EAF L  +M  + L P++VTY  L + 
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A +L+ E+   G++ N  T+N ++   CK G ID+A K++++ME  GF PD
Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TL+DA CK+  M  A  ++  M  + L+   +T N +++  C    L++   LL 
Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                                            W  M E+ IMP+  TYN++I       
Sbjct: 593 ---------------------------------W--MLEKGIMPNATTYNSLIKQYCIRN 617

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
                 ++   +   G++PD  T+N +I G C    +++A   H  MV K F   + + N
Sbjct: 618 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 677

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  +     +A + F     +G   D   YN        E ++E    L  E  EK
Sbjct: 678 ALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEK 737

Query: 425 KLGPD 429
            L  D
Sbjct: 738 CLVGD 742



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 106/225 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VTY T++DA  K  ++    +LL  M  + L P   T+N+L++G+C  G 
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++  +++  M +   +P+  TYN LI  +C    +     + + M +  ++PD  TYN 
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++    EA+ L  ++   G      ++N +IK + K  K  +A ++   M   G
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
              D   YN   D N   G ME    + D    K L  +  T NT
Sbjct: 704 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 22/279 (7%)

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS-GKTEQAIDML 313
           ++ +  L+     DE    A KL+D+M    ++ S  + N  I  LS+     + A+ + 
Sbjct: 186 DIFFQVLVEAGMLDE----ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVF 241

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E  + G+  +  ++N I H  C  G+V +A Q   +M  +   PD+++ + +++G C+ 
Sbjct: 242 VEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQV 301

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G L++ LK      +KG   +  TYN +I  LCK  ++ +A  +L EM  + + PD   Y
Sbjct: 302 GELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIY 361

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +     + G +  A +    M                    +I P  I+Y+  I   C
Sbjct: 362 TTLIDGFCKLGNVSSAYRLFDEM-----------------QKRKISPDFITYTAVICGLC 404

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             GR  +A ++F E   K +  ++ TY  L++G  K  K
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 443



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 22/176 (12%)

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR-LE 412
           K +  D    +I    L   G+L++A K F   +  G  +   + N  IS L ++   ++
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK 235

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  +  E  E  +  +  +Y  I  +L + GR+ EA +    M   G I          
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI---------- 285

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  P  ISYS  IN +C  G  +  L++ EE + KG+  N  TY    NG+I
Sbjct: 286 -------PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY----NGVI 330


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 152/456 (33%), Positives = 256/456 (56%), Gaps = 2/456 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD V+YNTI++ L K+ +L +  DLL +M+     PN  TY IL+ G CK G ++EAMR
Sbjct: 7   LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +     DV  Y+ LI+G+C+ G L+    L  EM    + P+VV Y+ LIN F 
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   EA  ++  + E GI+P+  T+  MI   CK+G+  KA  +   M E G  P  V
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN LI+  CK G + +AF++ + M  KG ++  ++ NT++  LC   KLDEA  L +S 
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 247 SKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            + G Y+  D +++ T+I G  ++ + ++A++++D M ER    + FT + +I    +SG
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+++   + + G++P  TT++ +I GFC    +  A    ++M      P +   N
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++ LC+E  LE+A + F+         D++++N +I    K   +  A  LL++M++ 
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQM 426

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L PD YTY++    L + G++EEA+     M+ +G
Sbjct: 427 GLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 241/464 (51%), Gaps = 2/464 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG  C P++ TY  ++D L K+G++ E   LL +MK++GL  +   Y+ L+SG+C  G 
Sbjct: 36  MEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGC 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L     + D M +    P+V  Y+ LING+C  G+  EA  +   M    + PDV TY  
Sbjct: 96  LDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTC 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + GR+ +A  L D + E G +P+ VT+N++I   CKEG I  A KI   M E G
Sbjct: 156 MIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLNTILHTLCCEKKLDE 238
              + V+YNTLI   C  G ++EA ++   +   G  ++ + IT NT++  LC E +LD+
Sbjct: 216 KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  + ++  +RG + +  +   LI  Y +    ++A++LW  + +  ++PS+ TY+ MI 
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  +      A  + + +  SG+ P    +NT++   C E  +E+A +   +M E + +P
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D ++ NI++ G  + G +  A +        G   D+ TY++ I+ L K  ++E+A G  
Sbjct: 396 DTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAF 455

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             M    + PD + Y ++      +  +EE       M + G I
Sbjct: 456 DSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVI 499



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 234/455 (51%), Gaps = 19/455 (4%)

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
           LPD+ +YN +ING C    LE+A  L  EME     P+  TY  L++   + GR  EA +
Sbjct: 7   LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L+ E+   G++ + V ++ +I  +C +G +D+   +   M E G SP+ V Y+ LI+  C
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           K G   EA  ++  M  +G++ +  T   ++  LC + +  +A  L +  +++G     V
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  LI G  ++     A K+++ M E+       +YN +I GL  +GK ++A+ + + L
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 317 LQSG--MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           L+ G  + PD  TFNT+I G C EG+++KA++ ++ M+E+    ++ TC+IL+    + G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
           I++KA++ ++     G    S TY+ +I   CK   L  A GL S M+   L P  + Y 
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +  +L +   LE+A++    M E+                   +P +IS++  I+    
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKES-----------------NCEPDTISFNIMIDGTLK 409

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            G    A ++  + +Q G+  +  TY + +N L K
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSK 444



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 206/404 (50%), Gaps = 2/404 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V Y+ +++   KKG   E   +L  M ++G+ P+  TY  ++ G CK G  ++A
Sbjct: 110 GISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKA 169

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + DLMT+    P   TYN+LING C  G + +AF++ + M       +VV+YNTLI  
Sbjct: 170 LDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229

Query: 125 FFESGRSMEAFKLIDELDEHG--IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
              +G+  EA KL   L E G  ++P+ +T N +I+  CKEG++DKA +I   M E G  
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            +  T + LI    K+G +++A  +   + + GL  ++ T + ++   C    L+ A  L
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +     G       Y TL+    ++    +A +L+ EMKE    P T ++N MI G  +
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G    A ++LN++ Q G+ PD  T+++ I+     GQ+E+A    + M+     PD   
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
            + L+ G      +E+ +   R     G  +D    N++++ LC
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 17/252 (6%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           MK   I+P   +YN +I GL +  + E+A+D+L E+  S   P+  T+  ++ G C EG+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           VE+A++   +M  K  + D+V  + L+SG C +G L++    F   + KG + + V Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           LI+  CK+    +A  +L  M E+ + PD YTY  +   L + GR  +A     +M E G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           +                 +PS+++Y+  IN  C +G   DA +IFE   +KG  +   +Y
Sbjct: 181 E-----------------EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223

Query: 521 MNLMNGLIKRRK 532
             L+ GL    K
Sbjct: 224 NTLIMGLCNNGK 235



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 71/133 (53%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD +++N ++D   K G ++  ++LL+DM++ GL P+  TY+  ++   KLG ++EA 
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
              D M  +   PD   Y+ LI G+     +EE   L ++M  + ++ D+   N+++   
Sbjct: 453 GAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFL 512

Query: 126 FESGRSMEAFKLI 138
             S   +   +L+
Sbjct: 513 CNSAEHLHVMELL 525


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 267/526 (50%), Gaps = 18/526 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TY  ++D   K+G + E   +  +M  +GL  N  TYN ++ G  K G 
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM + + M      PD WTYN+LI+G+  +  + +A  L  EM++ KL P   TY+ 
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    S    +A +++D++  +G+KPN   +  +IK Y +E + + A ++++ M  NG
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   YN LI   C+A  +EEA  ++  MG KG+K N  T    ++      ++  A 
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G   + V Y  LI G+        AL  +  M E+ ++P    Y+A+I  L
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++GKT++A+ +  + L++G++PD   +N++I GFC EG +EKA Q +++M+     P+I
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N L++GLC+ G + KA + F     K    D VTY+T+I   CK   L +AF L  E
Sbjct: 697 VVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDE 756

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K + PD Y Y  +     + G LE+A            + H+  Q +          
Sbjct: 757 MISKGISPDGYIYCILIDGCGKEGNLEKAL----------SLFHEAQQKSVG-------- 798

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           S  +++  I+  C  G+  +A ++F++   K +  N  TY  L++ 
Sbjct: 799 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/547 (30%), Positives = 282/547 (51%), Gaps = 21/547 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN ++D   K   + +  +LL++MK + L P+  TY++L+SG C    L++A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+D M +N   P+V+ Y  LI  +      E A  L K M +  +LPD+  YN LI  
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + +  EA  L+ ++ E GIKPNA T+   I  Y K G+I  A +  ++M  +G  P+
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y  LI  +C  GN  EA      M  KGL  +    + I+H+L    K  EA  +  
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   D   Y +LI+G+ ++    +A +L+DEM    I P+   YN +I GL + G
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A ++ +E+ +  ++PD  T++TII G+C  G + +A +  ++M+ K   PD     
Sbjct: 711 EVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 770

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVT-YNTLISSLCKERRLEDAFGLLSEMEE 423
           IL+ G  +EG LEKAL  F     + K+V S++ +N+LI S CK  ++ +A  L  +M +
Sbjct: 771 ILIDGCGKEGNLEKALSLFHEA--QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK----------------FTSIMVETGKINHQVV 467
           KKL P+  TY  +  A  ++  +EEA++                +TS+++   +I ++  
Sbjct: 829 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 888

Query: 468 QPNTSKTPEE--IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             +  K  E   I   +I+Y    + +C +G+  +AL++  ++  +GI +    +  L+ 
Sbjct: 889 MISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIF 948

Query: 526 GLIKRRK 532
            L K ++
Sbjct: 949 HLCKEKQ 955



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 256/530 (48%), Gaps = 18/530 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TY  ++D   K+ +  E + +   M   GL PNR TY  L+ G+ K G ++EA
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ D M       +V TYN +I G   AG + +A  L  EM    L PD  TYN LI+ 
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +S    +A +L+ E+    + P+  T++++I   C    + KA +++  M  NG  P+
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y TLI A  +    E A  ++ +M   G+  +    N ++  LC  KK++EA MLL 
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV 545

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   +  +YG  I  Y +  +   A + + +M    I+P+   Y  +I G    G
Sbjct: 546 DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T +A+     +L+ G+IPD   ++ IIH     G+ ++A+    K ++    PD+   N
Sbjct: 606 NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+SG C+EG +EKA + +   +  G   + V YNTLI+ LCK   +  A  L  E+EEK
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD  TY+ I     +SG L EA K    M+  G                 I P    
Sbjct: 726 DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG-----------------ISPDGYI 768

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           Y   I+    +G  + AL +F E +QK +  + S + +L++   K  K I
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVI 817



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 266/578 (46%), Gaps = 56/578 (9%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL--- 58
           EGF   P  +  N ++  L K   +     +   M +  +VP+  TY  ++  +CK+   
Sbjct: 201 EGF--FPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258

Query: 59  -------------------------------GWLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
                                          G + EA+ V  LM +    PD  TY +L+
Sbjct: 259 IKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLV 318

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +G+C     +EA  + + M S  L P+  TY  LI+ F + G   EA ++ DE+   G+K
Sbjct: 319 DGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLK 378

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
            N VT+N MI    K G++ KA  +   M   G  PD  TYN LID   K+ +M +A  +
Sbjct: 379 LNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACEL 438

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +  M  + L  +  T + ++  LC    L +A  +L+   + G   +   YGTLI  Y +
Sbjct: 439 LAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + +   A++L   M    ++P  F YN +I GL ++ K E+A  +L ++ + G+ P+  T
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +   I+ +   G+++ A ++   M+     P+ V   IL+ G C  G   +AL  F+  +
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            KG   D   Y+ +I SL K  + ++A G+  +  +  + PD + Y ++ +   + G +E
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 448 EAQKFTSIMVETGKINHQVVQPNT-----------SKTPEEID--------PSSISYSEK 488
           +A +    M+  G IN  +V  NT           +K  E  D        P  ++YS  
Sbjct: 679 KASQLYDEMLHNG-INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI 737

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           I+ +C  G   +A ++F+E   KGI+ +   Y  L++G
Sbjct: 738 IDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 237/480 (49%), Gaps = 1/480 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+  TY   ++   K G++        DM   G+VPN   Y IL+ G+C +G   EA
Sbjct: 551  GIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +     M +   +PD+  Y+ +I+     G  +EA  +  +     ++PDV  YN+LI+ 
Sbjct: 611  LSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISG 670

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F + G   +A +L DE+  +GI PN V +N +I   CK G++ KA ++   +EE    PD
Sbjct: 671  FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPD 730

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             VTY+T+ID  CK+GN+ EAF++ D M  KG+  +      ++     E  L++A  L +
Sbjct: 731  VVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 790

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             A ++       ++ +LI  + +  K   A +L+D+M ++++ P+  TY  +I    ++ 
Sbjct: 791  EAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              E+A  +  ++    +IP+  T+ +++  +   G   K +     M  +    D +   
Sbjct: 850  MMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 909

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ S  C+EG   +ALK     +++G  ++   ++ LI  LCKE+++     LLSEM ++
Sbjct: 910  VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKE 969

Query: 425  KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +L     T   +     +SG  +EA K   +M   G +   +   ++  T  +   S IS
Sbjct: 970  ELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMKSDIS 1029



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 235/490 (47%), Gaps = 18/490 (3%)

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
           N T ++I +  +  LG+L EA  V          P +   N L+     A M+   +++ 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
             M   K++PDV TY  +I    + G  ++   ++ E+++   KPN  T+N  I   C+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQT 289

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           G +D+A ++ + M E G  PD  TY  L+D  CK    +EA  + + M   GL  N  T 
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
             ++     E  ++EA  + +    RG  L+ V+Y  +I G  +  +  +A+ L++EM  
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
             + P T+TYN +I G  +S    +A ++L E+    + P   T++ +I G C    ++K
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +  ++M+    KP++     L+    +E   E A++  +  I  G   D   YN LI 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            LC+ +++E+A  LL +M EK + P+ +TY A      +SG ++ A+++   M+ +G   
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG--- 586

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P+++ Y+  I  HC  G   +AL  F+   +KG+  +   Y  +
Sbjct: 587 --------------IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 524 MNGLIKRRKS 533
           ++ L K  K+
Sbjct: 633 IHSLSKNGKT 642



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME    +P+ +TY ++L +  + G   ++  L  DM+ +G+  +   Y ++ S YCK G 
Sbjct: 861  METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 920

Query: 61   LKEAMRVVDLMTQNKSLPDVW-----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
              EA++++     NKSL +        ++ LI   C    +     L  EM   +L    
Sbjct: 921  SLEALKLL-----NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 975

Query: 116  VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
             T NTL+  F++SG   EA K++  +   G  P +++
Sbjct: 976  KTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 278/537 (51%), Gaps = 31/537 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+NT+L  L  + +++E  +L   M +    PN  T+  L++G C+ G + E
Sbjct: 143 LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLI 122
           A+ ++D M ++   P   TY  +++G C  G    A  L ++ME +  ++P+VV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAII 262

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  +A  L  E+ E GI P+  T+N MI  +C  G+   A ++++ M E   S
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN LI+A  K G   EA  + D M  +G+  NTIT ++++   C + +LD A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   + +++ TLI GY   ++ +  ++L  EM E  ++  T TYN +I G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK----- 357
            G    A+D+L E++ SG+ PD  T +T++ G C  G+++ AL+   K+++KS K     
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKKDLDAS 501

Query: 358 -------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                  PD+ T NIL+SGL  EG   +A + +     +G   D++TY+++I  LCK+ R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  +   M  K   P+  T+  +     ++GR+++  +   +  E G+         
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR--------- 609

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  I  ++I+Y   I      G    AL IF+E    G+  +  T  N++ GL
Sbjct: 610 -----RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/581 (28%), Positives = 280/581 (48%), Gaps = 67/581 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  ++  + +  + + V  L   M+++ +  +  ++ IL+  +C    L  A+ 
Sbjct: 76  LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+N L++G C    + EA  L  +M      P+VVT+ TL+N   
Sbjct: 136 TFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++P  +T+  ++   CK G    A  ++R MEE +   P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNV 255

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID+ CK G   +A  +   M  KG+  +  T N+++   C   +  +A  LL  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V+Y  LI  + ++ K   A +L+DEM  R I+P+T TY++MI G  +  +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 306 TEQA-----------------------------------IDMLNELLQSGMIPDETTFNT 330
            + A                                   +++L+E+ ++G++ D TT+NT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGF   G +  AL    +M+     PDIVTC+ LL GLC  G L+ AL+ F+      
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D  TYN LIS L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 440 LVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           L +  RL+EA Q F S+                    +   P+ ++++  IN +C  GR 
Sbjct: 556 LCKQSRLDEATQMFDSM------------------GSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            D L++F E  ++GI  N  TY+ L+ G  ++  +I+ A+D
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF-RKVGNINGALD 637



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 238/457 (52%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  +TY TI+D + K G      DLL  M++   ++PN   Y+ ++   CK G   +
Sbjct: 214 GLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +    PD++TYN +I G+C++G   +A +L +EM   K+ PDVVTYN LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T++ MI  +CK+ ++D A  +   M   G SP
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +T+NTLID  C A  +++   ++  M   GL  +T T NT++H       L+ A  LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q  + M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT   L++G C+ G ++  L+ F     +G   +++TY TLI    K   + 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T L     L+ A
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 257/515 (49%), Gaps = 21/515 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL-------MTQNKSLP 78
           L +  DL SDM +   +P+       V  +CKL  +   M   DL       M + +   
Sbjct: 60  LEDAIDLFSDMLRSRPLPS-------VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++ +LI  +C+   L  A     ++  L L PDVVT+NTL++      R  EA  L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++ E   +PN VT   ++   C+EG+I +A  ++  M E+G  P  +TY T++D  CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +  N +  + I+ +LC + +  +A  L     ++G + D  +
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y ++I G+    + + A +L  EM ER+I P   TYNA+I    + GK  +A ++ +E+L
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+IP+  T++++I GFC + +++ A      M  K   P+++T N L+ G C    ++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             ++        G   D+ TYNTLI        L  A  LL EM    L PD  T   + 
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G+L++A +   +M ++ K        + S     ++P   +Y+  I+   ++G+
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKK------DLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + +A +++EE   +GI  +  TY ++++GL K+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 11/355 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN +++A  K+GK  E  +L  +M  +G++PN  TY+ ++ G+CK   L  A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM      P++ T+N LI+G+C A  +++   L  EM    L+ D  TYNTLI+ F+ 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G    A  L+ E+   G+ P+ VT + ++   C  GK+  A ++ + M++         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 179 --NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             NG  PD  TYN LI      G   EA  + + M  +G+  +TIT ++++  LC + +L
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  + +S   + +  + V++ TLI GY +  + +  L+L+ EM  R I+ +  TY  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           I G  + G    A+D+  E++ SG+ PD  T   ++ G  S+ ++++A+    K+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 218/451 (48%), Gaps = 59/451 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V Y+ I+D+L K G+ ++ ++L ++M+++G+ P+  TYN ++ G+C  G   +A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-------- 118
           ++  M + K  PDV TYN LIN +   G   EA  L  EM    ++P+ +TY        
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 119 ---------------------------NTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                      NTLI+ +  + R  +  +L+ E+ E G+  +  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I  +   G ++ A  +++ M  +G  PD VT +TL+D  C  G +++A  M  VM
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            +                   +K LD ++         G   D  +Y  LI+G   + K 
Sbjct: 492 QKS------------------KKDLDASHPF------NGVEPDVQTYNILISGLINEGKF 527

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L++EM  R I+P T TY++MI GL +  + ++A  M + +      P+  TF T+
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G+C  G+V+  L+   +M  +    + +T   L+ G  + G +  AL  F+  I  G 
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             D++T   +++ L  +  L+ A  +L +++
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 176/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TY++++D   K+ +L+    +   M  +G  PN  T+N L+ GYC    + + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  MT+   + D  TYN LI+G+   G L  A  L +EM S  L PD+VT +TL++ 
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK++     +LD     +G++P+  T+NI+I     EGK  +A ++ 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M D MG K    N +T  T+++  C  
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   + ++Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ GL    + ++A+ ML +L  S
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 21/319 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G    ++ L +  H +   K L++A  L +   +       V +  L+    R E+ +  
Sbjct: 42  GFGGESLKLQSGFHEI---KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M+ +QI    +++  +I       K   A+    ++ + G+ PD  TFNT++HG
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHG 158

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C E +V +AL   ++M E + +P++VT   L++GLCREG + +A+      +  G    
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +TY T++  +CK      A  LL +MEE   + P+   Y+AI  +L + GR  +AQ   
Sbjct: 219 QITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + M E G                 I P   +Y+  I   CS GR+ DA Q+ +E  ++ I
Sbjct: 279 TEMQEKG-----------------IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 514 AINKSTYMNLMNGLIKRRK 532
           + +  TY  L+N  +K  K
Sbjct: 322 SPDVVTYNALINAFVKEGK 340


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 278/537 (51%), Gaps = 31/537 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+NT+L  L  + +++E  +L   M +    PN  T+  L++G C+ G + E
Sbjct: 143 LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLI 122
           A+ ++D M ++   P   TY  +++G C  G    A  L ++ME +  ++P+VV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  +A  L  E+ E GI P+  T+N MI  +C  G+   A ++++ M E   S
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN LI+A  K G   EA  + D M  +G+  NTIT ++++   C + +LD A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   + +++ TLI GY   ++ +  ++L  EM E  ++  T TYN +I G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK----- 357
            G    A+D+L E++ SG+ PD  T +T++ G C  G+++ AL+   K+++KS K     
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKKDLDAS 501

Query: 358 -------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                  PD+ T NIL+SGL  EG   +A + +     +G   D++TY+++I  LCK+ R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  +   M  K   P+  T+  +     ++GR+++  +   +  E G+         
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR--------- 609

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  I  ++I+Y   I      G    AL IF+E    G+  +  T  N++ GL
Sbjct: 610 -----RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/581 (28%), Positives = 281/581 (48%), Gaps = 67/581 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  ++  + +  + + V  L   M+++ +  +  ++ IL+  +C    L  A+ 
Sbjct: 76  LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+N L++G C    + EA  L  +M      P+VVT+ TL+N   
Sbjct: 136 TFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++P  +T+  ++   CK+G    A  ++R MEE +   P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID+ CK G   +A  +   M  KG+  +  T N+++   C   +  +A  LL  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V+Y  LI  + ++ K   A +L+DEM  R I+P+T TY++MI G  +  +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 306 TEQA-----------------------------------IDMLNELLQSGMIPDETTFNT 330
            + A                                   +++L+E+ ++G++ D TT+NT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGF   G +  AL    +M+     PDIVTC+ LL GLC  G L+ AL+ F+      
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D  TYN LIS L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 440 LVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           L +  RL+EA Q F S+                    +   P+ ++++  IN +C  GR 
Sbjct: 556 LCKQSRLDEATQMFDSM------------------GSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            D L++F E  ++GI  N  TY+ L+ G  ++  +I+ A+D
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF-RKVGNINGALD 637



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 239/457 (52%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  +TY TI+D + KKG      +LL  M++   ++PN   Y+ ++   CK G   +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +    PD++TYN +I G+C++G   +A +L +EM   K+ PDVVTYN LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T++ MI  +CK+ ++D A  +   M   G SP
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +T+NTLID  C A  +++   ++  M   GL  +T T NT++H       L+ A  LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q  + M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT   L++G C+ G ++  L+ F     +G   +++TY TLI    K   + 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T L     L+ A
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 257/515 (49%), Gaps = 21/515 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL-------MTQNKSLP 78
           L +  DL SDM +   +P+       V  +CKL  +   M   DL       M + +   
Sbjct: 60  LEDAIDLFSDMLRSRPLPS-------VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++ +LI  +C+   L  A     ++  L L PDVVT+NTL++      R  EA  L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++ E   +PN VT   ++   C+EG+I +A  ++  M E+G  P  +TY T++D  CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +  N +  + I+ +LC + +  +A  L     ++G + D  +
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y ++I G+    + + A +L  EM ER+I P   TYNA+I    + GK  +A ++ +E+L
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+IP+  T++++I GFC + +++ A      M  K   P+++T N L+ G C    ++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             ++        G   D+ TYNTLI        L  A  LL EM    L PD  T   + 
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G+L++A +   +M ++ K        + S     ++P   +Y+  I+   ++G+
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKK------DLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + +A +++EE   +GI  +  TY ++++GL K+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 11/355 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN +++A  K+GK  E  +L  +M  +G++PN  TY+ ++ G+CK   L  A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM      P++ T+N LI+G+C A  +++   L  EM    L+ D  TYNTLI+ F+ 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G    A  L+ E+   G+ P+ VT + ++   C  GK+  A ++ + M++         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 179 --NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             NG  PD  TYN LI      G   EA  + + M  +G+  +TIT ++++  LC + +L
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  + +S   + +  + V++ TLI GY +  + +  L+L+ EM  R I+ +  TY  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           I G  + G    A+D+  E++ SG+ PD  T   ++ G  S+ ++++A+    K+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 218/451 (48%), Gaps = 59/451 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V Y+ I+D+L K G+ ++ ++L ++M+++G+ P+  TYN ++ G+C  G   +A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-------- 118
           ++  M + K  PDV TYN LIN +   G   EA  L  EM    ++P+ +TY        
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 119 ---------------------------NTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                      NTLI+ +  + R  +  +L+ E+ E G+  +  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I  +   G ++ A  +++ M  +G  PD VT +TL+D  C  G +++A  M  VM
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            +                   +K LD ++         G   D  +Y  LI+G   + K 
Sbjct: 492 QKS------------------KKDLDASHPF------NGVEPDVQTYNILISGLINEGKF 527

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L++EM  R I+P T TY++MI GL +  + ++A  M + +      P+  TF T+
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G+C  G+V+  L+   +M  +    + +T   L+ G  + G +  AL  F+  I  G 
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             D++T   +++ L  +  L+ A  +L +++
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 176/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TY++++D   K+ +L+    +   M  +G  PN  T+N L+ GYC    + + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  MT+   + D  TYN LI+G+   G L  A  L +EM S  L PD+VT +TL++ 
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK++     +LD     +G++P+  T+NI+I     EGK  +A ++ 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M D MG K    N +T  T+++  C  
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   + ++Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ GL    + ++A+ ML +L  S
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 21/319 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G    ++ L +  H +   K L++A  L +   +       V +  L+    R E+ +  
Sbjct: 42  GFGGESLKLQSGFHEI---KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M+ +QI    +++  +I       K   A+    +L + G+ PD  TFNT++HG
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHG 158

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C E +V +AL   ++M E + +P++VT   L++GLCREG + +A+      +  G    
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +TY T++  +CK+     A  LL +MEE   + P+   Y+AI  +L + GR  +AQ   
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + M E G                 I P   +Y+  I   CS GR+ DA Q+ +E  ++ I
Sbjct: 279 TEMQEKG-----------------IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 514 AINKSTYMNLMNGLIKRRK 532
           + +  TY  L+N  +K  K
Sbjct: 322 SPDVVTYNALINAFVKEGK 340


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/488 (31%), Positives = 251/488 (51%), Gaps = 6/488 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYNT+LD+  K+GK+ E   LL  M+K G +PN  TYN+LV+G    G L++A
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +       +TY+ LI G+C  G L+EA RL +EM S   +P +VTYNT++  
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYG 304

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A KL+D +    + P+ V++N +I  Y + G I +A  +   +   G  P 
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLID  C+ G+++ A R+ D M + G   +  T   ++   C    L  A  L +
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG   D  +Y T I G  +    ++A  + +EM  R   P   TYN  I GL + G
Sbjct: 425 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 484

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A +++ ++L +G++PD  T+ +IIH     G + KA     +M+ K   P +VT  
Sbjct: 485 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYT 544

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+      G L+ A+  F     KG   + +TYN LI+ LCK R+++ A+   +EM+ K
Sbjct: 545 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P++YTY  +       G  +EA +    M++      + +QP++      +   +  
Sbjct: 605 GISPNKYTYTILINENCNLGHWQEALRLYKDMLD------REIQPDSCTHSALLKHLNKD 658

Query: 485 YSEKINEH 492
           Y   +  H
Sbjct: 659 YKSHVVRH 666



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 262/530 (49%), Gaps = 18/530 (3%)

Query: 5   GCLPDNVTYNTILDALFKK-GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G LPD    N +L  L  +   ++  R++ + M + G+ P   TYN ++  +CK G ++E
Sbjct: 149 GMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQE 208

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++  M +   LP+  TYN+L+NG  ++G LE+A  L +EM  L L     TY+ LI 
Sbjct: 209 ALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIR 268

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + E G+  EA +L +E+   G  P  VT+N ++   CK G++  A K++  M      P
Sbjct: 269 GYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP 328

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V+YNTLI    + GN+ EAF +   +  +GL  + +T NT++  LC    LD A  L 
Sbjct: 329 DLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLK 388

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   K G   D  ++  L+ G+ +      A +L+DEM  R + P  F Y   I G  + 
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +A  M  E+L  G  PD  T+N  I G    G +++A +   KM+     PD VT 
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             ++      G L KA   F   + KG     VTY  LI S     RL+ A     EM E
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           K + P+  TY A+   L +  ++++A KF + M   G                 I P+  
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG-----------------ISPNKY 611

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +Y+  INE+C+ G +++AL+++++   + I  +  T+  L+  L K  KS
Sbjct: 612 TYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKS 661



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 230/462 (49%), Gaps = 19/462 (4%)

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME-AFKLIDELDEHGIKP 148
           +    MLE+   +  +M S  +LPD+   N ++    +   S++ A ++ + + E GI+P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
             VT+N M+  +CK+GK+ +A +++  M++ G  P+ VTYN L++    +G +E+A  ++
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M R GL+++  T + ++   C + +LDEA  L      RG     V+Y T++ G  + 
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKW 308

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            + + A KL D M  + +MP   +YN +I+G ++ G   +A  +  EL   G++P   T+
Sbjct: 309 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTY 368

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           NT+I G C  G ++ A++  ++M++    PD+ T  IL+ G C+ G L  A + F   + 
Sbjct: 369 NTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLN 428

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   D   Y T I    K      AFG+  EM  +   PD  TY      L + G L+E
Sbjct: 429 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 488

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKT------------------PEEIDPSSISYSEKIN 490
           A +    M+  G +   V   +                       + I PS ++Y+  I+
Sbjct: 489 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIH 548

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +  +GR K A+  F E  +KG+  N  TY  L+NGL K RK
Sbjct: 549 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 278/537 (51%), Gaps = 31/537 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+NT+L  L  + +++E  +L   M +    PN  T+  L++G C+ G + E
Sbjct: 143 LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLI 122
           A+ ++D M ++   P   TY  +++G C  G    A  L ++ME +  ++P+VV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  +A  L  E+ E GI P+  T+N MI  +C  G+   A ++++ M E   S
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN LI+A  K G   EA  + D M  +G+  NTIT ++++   C + +LD A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   + +++ TLI GY   ++ +  ++L  EM E  ++  T TYN +I G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK----- 357
            G    A+D+L E++ SG+ PD  T +T++ G C  G+++ AL+   K+++KS K     
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKKDLDAS 501

Query: 358 -------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                  PD+ T NIL+SGL  EG   +A + +     +G   D++TY+++I  LCK+ R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  +   M  K   P+  T+  +     ++GR+++  +   +  E G+         
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR--------- 609

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  I  ++I+Y   I      G    AL IF+E    G+  +  T  N++ GL
Sbjct: 610 -----RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/581 (28%), Positives = 281/581 (48%), Gaps = 67/581 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  ++  + +  + + V  L   M+++ +  +  ++ IL+  +C    L  A+ 
Sbjct: 76  LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+N L++G C    + EA  L  +M      P+VVT+ TL+N   
Sbjct: 136 TFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++P  +T+  ++   CK+G    A  ++R MEE +   P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID+ CK G   +A  +   M  KG+  +  T N+++   C   +  +A  LL  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V+Y  LI  + ++ K   A +L+DEM  R I+P+T TY++MI G  +  +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 306 TEQA-----------------------------------IDMLNELLQSGMIPDETTFNT 330
            + A                                   +++L+E+ ++G++ D TT+NT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGF   G +  AL    +M+     PDIVTC+ LL GLC  G L+ AL+ F+      
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D  TYN LIS L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 440 LVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           L +  RL+EA Q F S+                    +   P+ ++++  IN +C  GR 
Sbjct: 556 LCKQSRLDEATQMFDSM------------------GSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            D L++F E  ++GI  N  TY+ L+ G  ++  +I+ A+D
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF-RKVGNINGALD 637



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 239/457 (52%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  +TY TI+D + KKG      +LL  M++   ++PN   Y+ ++   CK G   +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +    PD++TYN +I G+C++G   +A +L +EM   K+ PDVVTYN LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T++ MI  +CK+ ++D A  +   M   G SP
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +T+NTLID  C A  +++   ++  M   GL  +T T NT++H       L+ A  LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q  + M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT   L++G C+ G ++  L+ F     +G   +++TY TLI    K   + 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T L     L+ A
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 257/515 (49%), Gaps = 21/515 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL-------MTQNKSLP 78
           L +  DL SDM +   +P+       V  +CKL  +   M   DL       M + +   
Sbjct: 60  LEDAIDLFSDMLRSRPLPS-------VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++ +LI  +C+   L  A     ++  L L PDVVT+NTL++      R  EA  L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++ E   +PN VT   ++   C+EG+I +A  ++  M E+G  P  +TY T++D  CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +  N +  + I+ +LC + +  +A  L     ++G + D  +
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y ++I G+    + + A +L  EM ER+I P   TYNA+I    + GK  +A ++ +E+L
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+IP+  T++++I GFC + +++ A      M  K   P+++T N L+ G C    ++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             ++        G   D+ TYNTLI        L  A  LL EM    L PD  T   + 
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G+L++A +   +M ++ K        + S     ++P   +Y+  I+   ++G+
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKK------DLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + +A +++EE   +GI  +  TY ++++GL K+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 11/355 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN +++A  K+GK  E  +L  +M  +G++PN  TY+ ++ G+CK   L  A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM      P++ T+N LI+G+C A  +++   L  EM    L+ D  TYNTLI+ F+ 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G    A  L+ E+   G+ P+ VT + ++   C  GK+  A ++ + M++         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 179 --NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             NG  PD  TYN LI      G   EA  + + M  +G+  +TIT ++++  LC + +L
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  + +S   + +  + V++ TLI GY +  + +  L+L+ EM  R I+ +  TY  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           I G  + G    A+D+  E++ SG+ PD  T   ++ G  S+ ++++A+    K+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 218/451 (48%), Gaps = 59/451 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V Y+ I+D+L K G+ ++ ++L ++M+++G+ P+  TYN ++ G+C  G   +A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-------- 118
           ++  M + K  PDV TYN LIN +   G   EA  L  EM    ++P+ +TY        
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 119 ---------------------------NTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                      NTLI+ +  + R  +  +L+ E+ E G+  +  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I  +   G ++ A  +++ M  +G  PD VT +TL+D  C  G +++A  M  VM
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            +                   +K LD ++         G   D  +Y  LI+G   + K 
Sbjct: 492 QKS------------------KKDLDASHPF------NGVEPDVQTYNILISGLINEGKF 527

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L++EM  R I+P T TY++MI GL +  + ++A  M + +      P+  TF T+
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G+C  G+V+  L+   +M  +    + +T   L+ G  + G +  AL  F+  I  G 
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             D++T   +++ L  +  L+ A  +L +++
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 176/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TY++++D   K+ +L+    +   M  +G  PN  T+N L+ GYC    + + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  MT+   + D  TYN LI+G+   G L  A  L +EM S  L PD+VT +TL++ 
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK++     +LD     +G++P+  T+NI+I     EGK  +A ++ 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M D MG K    N +T  T+++  C  
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   + ++Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ GL    + ++A+ ML +L  S
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 21/319 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G    ++ L +  H +   K L++A  L +   +       V +  L+    R E+ +  
Sbjct: 42  GFGGESLKLQSGFHEI---KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M+ +QI    +++  +I       K   A+    ++ + G+ PD  TFNT++HG
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHG 158

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C E +V +AL   ++M E + +P++VT   L++GLCREG + +A+      +  G    
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +TY T++  +CK+     A  LL +MEE   + P+   Y+AI  +L + GR  +AQ   
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + M E G                 I P   +Y+  I   CS GR+ DA Q+ +E  ++ I
Sbjct: 279 TEMQEKG-----------------IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 514 AINKSTYMNLMNGLIKRRK 532
           + +  TY  L+N  +K  K
Sbjct: 322 SPDVVTYNALINAFVKEGK 340


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/567 (28%), Positives = 282/567 (49%), Gaps = 64/567 (11%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G+ C P+ V+Y+TI+D  FK+G++++   L  +M  QG  P+  TY+ L+ G CK   + 
Sbjct: 196 GYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMN 255

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A  ++  M     +P+  TYN++I G+C+ G LEEA RL K+M    L PDVVTY  LI
Sbjct: 256 KAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLI 315

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTH----------------------------- 153
             + + GR  EA  + D +   G KPN+  +                             
Sbjct: 316 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 375

Query: 154 ------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
                 NI+I  Y K G +DKA      M +NG  PD V+Y+T+I   CK G +E+A   
Sbjct: 376 FEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYH 435

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCE---KKLDE-AYMLLNSASKRGYYLDEVSYGTLIT 263
            + M  +GL  N I+  +++H LC     KK++E A+ ++N    RG + D +   T++ 
Sbjct: 436 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN----RGIHPDAIFMNTIMD 491

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              ++ +   A   +D +    + P+  +YN +I G    GK +++I   + ++  G+ P
Sbjct: 492 NLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRP 551

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D  T+N +++G+   G+VE AL  + +M  K  K   +T NI+L GL + G +  A + +
Sbjct: 552 DSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELY 611

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
              + +G  +   TYNT++  LC+   +++A  +  ++  K+   D +T+  +  AL++ 
Sbjct: 612 MKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKV 671

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           GR++EA+   S MV  G +                 P  I+YS  I     +G  +++  
Sbjct: 672 GRIDEAKSLFSAMVLRGPV-----------------PHVITYSLMIKSRIEEGLLEESDD 714

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKR 530
           +F    + G A +     +++N +I+R
Sbjct: 715 LFLSMEKNGCAADS----HMLNVIIRR 737



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 258/532 (48%), Gaps = 20/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG---LVPNRTTYNILVSGYCK 57
           M   G  PD  +YN ++  L  + K  E  +LL  M   G     PN  +Y+ ++ G+ K
Sbjct: 156 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFK 215

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G + +A  + D M      PDV TY+ LI+G C A  + +A  + + M    ++P+  T
Sbjct: 216 EGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRT 275

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN +I  +   G+  EA +L+ ++   G++P+ VT+ ++I++YCK G+  +A  +  +M 
Sbjct: 276 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV 335

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  P+   Y+ L+      G + +   ++D+M R G+       N ++        +D
Sbjct: 336 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 395

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A        + G   D VSY T+I    +  +   A+  +++M    + P+  ++ ++I
Sbjct: 396 KAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLI 455

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL   G+ ++  ++  E++  G+ PD    NTI+   C EG+V +A  F + ++    K
Sbjct: 456 HGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVK 515

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P++V+ N L+ G C  G +++++K F   +  G   DS TYN L++   K  R+EDA  L
Sbjct: 516 PNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALAL 575

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             EM  K +     T   I   L ++GR+  A++    MV+ G             T   
Sbjct: 576 YREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG-------------TQLR 622

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+    +Y+  +   C      +AL++FE+ R K   ++  T+  ++N L+K
Sbjct: 623 IE----TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLK 670



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 228/454 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD VTY  ++    K G+  E R +   M ++G  PN T Y+IL+ GY   G 
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 358

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +   ++DLM ++    +   +N+LI  +   G +++A     EM    L PDVV+Y+T
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYST 418

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + GR  +A    +++   G+ PN ++   +I   C  G+  K  ++   M   G
Sbjct: 419 VIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 478

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +  NT++D  CK G + EA    D++   G+K N ++ NT++   C   K+DE+ 
Sbjct: 479 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESI 538

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +     G   D  +Y  L+ GYF++ +   AL L+ EM  + +     T N ++ GL
Sbjct: 539 KQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGL 598

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G+   A ++  +++  G      T+NT++ G C    V++AL+    +  K F+ D+
Sbjct: 599 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 658

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI+++ L + G +++A   F + +L+G     +TY+ +I S  +E  LE++  L   
Sbjct: 659 WTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLS 718

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           ME+     D +    I   L+E G +  A  + +
Sbjct: 719 MEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLT 752



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 245/516 (47%), Gaps = 21/516 (4%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-DLMTQNKSLPDVWT 82
           G+L+      +   K G      T N L+ G C      +AM +V   M +    PDV++
Sbjct: 108 GRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFS 167

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMES---LKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           YN LI G C     +EA  L   M +       P+VV+Y+T+I+ FF+ G   +A+ L D
Sbjct: 168 YNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFD 227

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           E+   G  P+ VT++ +I   CK   ++KA  I+++M + G  P+  TYN +I   C  G
Sbjct: 228 EMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLG 287

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            +EEA R++  M   GL+ + +T   ++   C   +  EA  + +S  ++G   +   Y 
Sbjct: 288 QLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 347

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            L+ GY           L D M    I      +N +I   ++ G  ++A+    E+ Q+
Sbjct: 348 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQN 407

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD  +++T+IH  C  G+VE A+   N+MV +   P+I++   L+ GLC  G  +K 
Sbjct: 408 GLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKV 467

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            +     I +G   D++  NT++ +LCKE R+ +A      +    + P+  +Y  +   
Sbjct: 468 EELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDG 527

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
               G+++E+ K    MV  G                 + P S +Y+  +N +   GR +
Sbjct: 528 YCFVGKMDESIKQFDRMVSIG-----------------LRPDSWTYNALLNGYFKNGRVE 570

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           DAL ++ E  +K +     T   +++GL +  + ++
Sbjct: 571 DALALYREMFRKDVKFCAITSNIILHGLFQAGRIVA 606



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 160/359 (44%), Gaps = 22/359 (6%)

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY-MLLNSASKR 249
           LI   C  G ++ AF    +  + G ++  +TLN ++  LC  K+ D+A  M+     + 
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE---RQIMPSTFTYNAMIWGLSQSGKT 306
           GY  D  SY  LI G   ++K+  AL+L   M         P+  +Y+ +I G  + G+ 
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  + +E++  G  PD  T++++I G C    + KA      M +K   P+  T NI+
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C  G LE+A++  +     G   D VTY  LI   CK  R  +A  +   M  K  
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG--------------KINHQVVQPNTS 472
            P+   Y  +       G L + +    +M+  G                 H  V    +
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399

Query: 473 KTPE----EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              E     + P  +SYS  I+  C  GR +DA+  F +   +G++ N  ++ +L++GL
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 458



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 9/239 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ TYN +L+  FK G++ +   L  +M ++ +     T NI++ G  + G 
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGR 603

Query: 61  LKEA----MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           +  A    M++VD  TQ +    + TYN ++ G C    ++EA R+ +++ S +   DV 
Sbjct: 604 IVAARELYMKMVDRGTQLR----IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVW 659

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T+N +IN   + GR  EA  L   +   G  P+ +T+++MIK   +EG ++++  +  +M
Sbjct: 660 TFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSM 719

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           E+NG + D    N +I    + G++  A   +  +  K   +   T   +L  +  EKK
Sbjct: 720 EKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEAST-AALLIPIVSEKK 777



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 25/240 (10%)

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTII-------HGFCSEGQVEKALQFHNKMVE 353
           S S   E A+++ +ELL          FN+++                  A+   N M  
Sbjct: 25  SGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMAR 84

Query: 354 KS---FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                   +     IL+   C  G L+ A   F  ++  G  V +VT N LI  LC  +R
Sbjct: 85  SGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKR 144

Query: 411 LEDAFGLL-SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            +DA  ++   M E    PD ++Y A+   L    + +EA +    M   G  N      
Sbjct: 145 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYN------ 198

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     P+ +SYS  I+    +G    A  +F+E   +G   +  TY +L++GL K
Sbjct: 199 --------CSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 262/500 (52%), Gaps = 13/500 (2%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M + G+ PN  TYNILV   C  G L+EA+ VV  M      P+  TYN L+  +C AG 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 96  LEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
           L+ A R+   M E     P++VT+N+++N   ++GR   A K+ DE+   G+ P+ V++N
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            ++  YCK G + ++  +   M + G  PD VT+ +LI A CKAGN+E+A  ++  M  +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           GL+MN +T   ++   C +  LD+A + +    K G     V Y  LI GY +  + + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            +L  EM+ +++ P   TY+ +I G  + G  + A  +  ++L+ G++PD  T++++I G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C E ++  A +    M++   +PD  T   L+ G C+EG +EKAL      I KG   D
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG-----RLEEA 449
            VTY+ LI+ L K  R ++A  LL ++  +   PD   Y A+     ++       L + 
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                +M E  K+   ++  N      ++D S   YS  I+ HC  G  + AL   ++  
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNW-----KLDGS--VYSILIHGHCRGGNVRKALSFHKQML 473

Query: 510 QKGIAINKSTYMNLMNGLIK 529
           + G + N ++ ++L+ GL +
Sbjct: 474 RSGFSPNSTSTISLVRGLFE 493



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/422 (33%), Positives = 246/422 (58%), Gaps = 15/422 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N++++ L K G++   R +  +M ++GL P+  +YN L+SGYCK+G L E++ V
Sbjct: 79  PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAV 138

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              MTQ   +PDV T+  LI+  C AG LE+A  L  +M    L  + VT+  LI+ F +
Sbjct: 139 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 198

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A   ++E+ + GI+P+ V +N +I  YCK G++D A +++R ME     PD VT
Sbjct: 199 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 258

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+T+I   CK GN++ AF++   M +KG+  + IT ++++  LC EK+L++A  L  +  
Sbjct: 259 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   DE +Y TLI G+ ++    +AL L DEM  + ++P   TY+ +I GLS+S +T+
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378

Query: 308 QAIDMLNELLQSGMIPDETTFN---------------TIIHGFCSEGQVEKALQFHNKMV 352
           +A  +L +L     +PD   ++                ++ GFC +G +++A + +  M+
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 438

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++++K D    +IL+ G CR G + KAL F +  +  G + +S +  +L+  L +E  + 
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 498

Query: 413 DA 414
           +A
Sbjct: 499 EA 500



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 217/391 (55%), Gaps = 18/391 (4%)

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
           HG+ PN  T+NI+++  C  G++++A  +V +M   G +P+ VTYNTL+ A C+AG ++ 
Sbjct: 4   HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63

Query: 204 AFRMMDVMGRKG-LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           A R++ +M  +G  K N +T N++++ LC   +++ A  + +   + G   D VSY TL+
Sbjct: 64  AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
           +GY +    + +L ++ EM +R ++P   T+ ++I    ++G  EQA+ ++ ++ + G+ 
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            +E TF  +I GFC +G ++ AL    +M +   +P +V  N L++G C+ G ++ A + 
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            R    K    D VTY+T+IS  CK   L+ AF L  +M +K + PD  TY+++   L E
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             RL +A +    M++ G                 + P   +Y+  I+ HC +G  + AL
Sbjct: 304 EKRLNDACELFENMLQLG-----------------VQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            + +E  +KG+  +  TY  L+NGL K  ++
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSART 377



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 217/424 (51%), Gaps = 20/424 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VT+ +++ A  K G L +   L++ M+++GL  N  T+  L+ G+CK G+L +A
Sbjct: 146 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 205

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +  V+ M +    P V  YN LING+C  G ++ A  L +EME+ ++ PDVVTY+T+I+ 
Sbjct: 206 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 265

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G    AF+L  ++ + G+ P+A+T++ +I+  C+E +++ AC++  NM + G  PD
Sbjct: 266 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 325

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TLID +CK GN+E+A  + D M RKG+  + +T + +++ L    +  EA+ LL 
Sbjct: 326 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 385

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                    D + Y  L+    + E                      +  A++ G    G
Sbjct: 386 KLYHEDPVPDNIKYDALMLCCSKAEFK--------------------SVVALLKGFCMKG 425

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  +   +L      D + ++ +IHG C  G V KAL FH +M+   F P+  +  
Sbjct: 426 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 485

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GL  EG++ +A    +  +      D+     LI    KE  ++    +L  M   
Sbjct: 486 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARD 545

Query: 425 KLGP 428
            L P
Sbjct: 546 GLLP 549



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 20/358 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  V YN +++   K G+++  R+L+ +M+ + + P+  TY+ ++SGYCK+G 
Sbjct: 212 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 271

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A ++   M +   LPD  TY+ LI G C    L +A  L + M  L + PD  TY T
Sbjct: 272 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 331

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   +A  L DE+   G+ P+ VT++++I    K  +  +A +++  +    
Sbjct: 332 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 391

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD + Y+ L+    KA      F+               ++  +L   C +  + EA 
Sbjct: 392 PVPDNIKYDALMLCCSKA-----EFK---------------SVVALLKGFCMKGLMKEAD 431

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S   R + LD   Y  LI G+ R     +AL    +M      P++ +  +++ GL
Sbjct: 432 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            + G   +A + + +LL    + D      +I     EG V+  +     M      P
Sbjct: 492 FEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/467 (32%), Positives = 244/467 (52%), Gaps = 6/467 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYNT+LD+  KKG + E   LL  M+  G  PN  TYN+LV+G    G +++A
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +      V+TY+ LI G+C  G +EEA RL +EM S   +P VVTYNT++  
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A KL+D +    + P+ V++N +I  Y + G I +A  +   +     +P 
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLID  C+ G+++ A R+ D M + G   +  T  T +   C    L  A  L +
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG   D  +Y T I G  +    ++A  + +EM  R   P   TYN  I GL + G
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A +++ ++L +G++PD  T+ +IIH     G + KA     +M+ K   P +VT  
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYT 556

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+      G L+ A+  F     KG   + +TYN LI+ LCK R+++ A+   +EM+ K
Sbjct: 557 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK 616

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
            + P++YTY  +       G  +EA +    M++      + +QP++
Sbjct: 617 GISPNKYTYTILINENCNLGHWQEALRLYKDMLD------REIQPDS 657



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 160/529 (30%), Positives = 259/529 (48%), Gaps = 18/529 (3%)

Query: 5   GCLPDNVTYNTILDALFKK-GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G LPD    N +L  L  +   ++  R++ + M + G+ P   TYN ++  +CK G ++E
Sbjct: 161 GLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQE 220

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++  M      P+  TYN+L+NG  ++G +E+A  L ++M  L L   V TY+ LI 
Sbjct: 221 ALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIR 280

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + E G+  EA +L +E+   G  P  VT+N ++   CK G++  A K++  M      P
Sbjct: 281 GYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP 340

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V+YNTLI    + GN+ EAF +   +  + L  + +T NT++  LC    LD A  L 
Sbjct: 341 DLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK 400

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   K G   D  ++ T + G+ +      A +L+DEM  R + P  F Y   I G  + 
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +A  M  E+L  G  PD  T+N  I G    G +++A +   KM+     PD VT 
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             ++      G L KA   F   + KG     VTY  LI S     RL+ A     EM E
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           K + P+  TY A+   L +  ++++A  F + M   G                 I P+  
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG-----------------ISPNKY 623

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +Y+  INE+C+ G +++AL+++++   + I  +  T+ +L+  L K  K
Sbjct: 624 TYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYK 672



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 213/447 (47%), Gaps = 35/447 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL------------------- 41
           M+  GC P++VTYN +++ L   G++ + ++L+ DM + GL                   
Sbjct: 228 MQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQ 287

Query: 42  ----------------VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                           VP   TYN ++ G CK G + +A +++D+M     +PD+ +YN 
Sbjct: 288 IEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 347

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI G+   G + EAF L  E+    L P VVTYNTLI+     G    A +L DE+ +HG
Sbjct: 348 LIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+  T    ++ +CK G +  A ++   M   G  PD   Y T I    K G+  +AF
Sbjct: 408 PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAF 467

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            M + M  +G   + IT N  +  L     L EA  L+      G   D V+Y ++I  +
Sbjct: 468 GMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAH 527

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                  +A  L+ EM  + I PS  TY  +I   +  G+ + AI    E+ + G+ P+ 
Sbjct: 528 LMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNV 587

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N +I+G C   ++++A  F  +M  K   P+  T  IL++  C  G  ++AL+ ++ 
Sbjct: 588 ITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKD 647

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLE 412
            + +    DS T+ +L+  L K+ +L 
Sbjct: 648 MLDREIQPDSCTHRSLLKHLNKDYKLH 674



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 172/404 (42%), Gaps = 68/404 (16%)

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMM-------------DVMGRKGLKMNTITL 223
            + GF    ++Y+ ++D   + G M  A+ +M             DV+    + M ++ L
Sbjct: 73  RQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKL 132

Query: 224 -------------------------------------NTILHTLC-CEKKLDEAYMLLNS 245
                                                N +L  L   +  +D A  + N 
Sbjct: 133 ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNV 192

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G     V+Y T++  + +      AL+L  +M+     P+  TYN ++ GLS SG+
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            EQA +++ ++L+ G+     T++ +I G+C +GQ+E+A +   +M+ +   P +VT N 
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ GLC+ G +  A K     + K    D V+YNTLI    +   + +AF L +E+  + 
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P   TY  +   L   G L+ A +    M++ G                  DP   ++
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGP-----------------DPDVFTF 415

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +   C  G    A ++F+E   +G+  ++  Y+  + G +K
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 459


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 279/552 (50%), Gaps = 45/552 (8%)

Query: 7   LPDNVTYNTIL-DALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           +P N   N IL D L ++ +L +    L +   +   P+  ++N L+SG+CK+G +  A 
Sbjct: 231 VPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAK 290

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
               +M +   LPDV++YN+L++G C AG +EEA     +ME+  + PD+VTYN L N F
Sbjct: 291 SFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G    A+K++  +  +G+ P+ VT+ I+I  +C+ G I+++ K+   M   G     
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSI 410

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK---------------------------M 218
           VTY  L+ + CK+G ++EA  ++  M   GLK                            
Sbjct: 411 VTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYP 470

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N+   + I+  L  +  + EA M  +S +K     + + Y  +I GY +      A++ +
Sbjct: 471 NSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSY 530

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            ++ E+ I P+  T+N++I+G  + GK  +A+ +L+ +   G++P   T+ T+++G+C E
Sbjct: 531 KQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEE 590

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G +       ++M  K+ KP  +T  +++ GLC+EG L ++++  +    +G   D +TY
Sbjct: 591 GDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITY 650

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           NT+I S CK   L+ AF L ++M +  L P   TY  +   L   G L++A +    + +
Sbjct: 651 NTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQD 710

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                            + I  + ++Y+  I  HC++G  ++AL  F +  ++G  ++  
Sbjct: 711 -----------------QSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIR 753

Query: 519 TYMNLMNGLIKR 530
            Y  ++N L KR
Sbjct: 754 DYSAVINRLCKR 765



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 250/487 (51%), Gaps = 27/487 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G LPD  +YN +L  L   G + E  +  +DM+  G+ P+  TYNIL +G+  LG 
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A +VV  M  N   PD+ TY +LI G C  G +EE+F+L+++M S  L   +VTY  
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTH--------------------------- 153
           L++   +SGR  EA  L+ E++  G+KP+ +T+                           
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVC 475

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           + +I    ++G I +A     ++ ++  + + + YN +ID   K GN+ EA R    +  
Sbjct: 476 SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 535

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           KG+    +T N++++  C + KL EA  LL++    G     V+Y TL+ GY  +   + 
Sbjct: 536 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHS 595

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
              +  EM+ + I P+  TY  ++ GL + G+  +++ +L  +   G+ PD+ T+NT+I 
Sbjct: 596 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 655

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            FC    ++KA Q HN+M++ S +P  VT N+L++GLC  G L+ A +   +   +   +
Sbjct: 656 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 715

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
             V Y T+I + C +  +++A     +M E+        Y+A+   L +   + +A+ F 
Sbjct: 716 TKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 775

Query: 454 SIMVETG 460
            +M+  G
Sbjct: 776 CMMLTHG 782



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 180/351 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++   + I+  LF+KG ++E +     + K  +      YNI++ GY KLG + EA+R 
Sbjct: 470 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 529

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              + +    P + T+N LI G+C  G L EA +L   ++   L+P  VTY TL+N + E
Sbjct: 530 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCE 589

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G     F ++ E++   IKP  +T+ +++K  CKEG++ ++ ++++ M   G  PD +T
Sbjct: 590 EGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 649

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT+I + CKA ++++AF++ + M +  L+ + +T N +++ LC    L +A  LL +  
Sbjct: 650 YNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 709

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +   L +V+Y T+I  +        AL  + +M ER    S   Y+A+I  L +     
Sbjct: 710 DQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLIT 769

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            A      +L  G+ PD+     +++ F   G      +    M++    P
Sbjct: 770 DAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 199/428 (46%), Gaps = 43/428 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TY+        +G + E  +L  +M  + + PN    + ++SG  + G 
Sbjct: 436 MEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 487

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA    D +T++    ++  YN++I+G+   G + EA R  K++    + P +VT+N+
Sbjct: 488 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 547

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + G+  EA KL+D +  HG+ P +VT+  ++  YC+EG +     ++  ME   
Sbjct: 548 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 607

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  +TY  ++   CK G + E+ +++  M  +GL  + IT NT++ + C    L +A+
Sbjct: 608 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 667

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N                                   +M +  + PS  TYN +I GL
Sbjct: 668 QLHN-----------------------------------QMLQHSLQPSPVTYNVLINGL 692

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  + A  +L  L    +   +  + TII   C++G V+ AL F ++MVE+ F+  I
Sbjct: 693 CVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSI 752

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              + +++ LC+  ++  A  FF   +  G   D      ++++  +       F + + 
Sbjct: 753 RDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAM 812

Query: 421 MEEKKLGP 428
           M +  L P
Sbjct: 813 MIKCGLLP 820



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/547 (22%), Positives = 232/547 (42%), Gaps = 67/547 (12%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK---SLPDV------- 80
           DLL +  + G   +R ++ I+     + G  KE  RV++ M + +   S P +       
Sbjct: 103 DLLRN--EYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160

Query: 81  ---W-----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
              W      ++ML   +  A M+ +A  +  +M+ L L   + TYN+L+     +    
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMW 220

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           + +   +E+   G+  N  T+ I+I   C++ ++  A   +R      F P  V++N L+
Sbjct: 221 DVY---NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALM 277

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              CK G+++ A     +M + GL  +  + N +LH LC    ++EA    N     G  
Sbjct: 278 SGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVE 337

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D V+Y  L  G+      + A K+   M    + P   TY  +I G  Q G  E++  +
Sbjct: 338 PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKL 397

Query: 313 LNELLQSGMIPDETTFNTIIHGFC---------------------------SEGQVEKAL 345
             ++L  G+     T+  ++   C                           S G VE+A+
Sbjct: 398 KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAI 457

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           + + +M  K   P+   C+ ++SGL  +G + +A  +F S      A + + YN +I   
Sbjct: 458 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 517

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
            K   + +A     ++ EK + P   T+ ++     + G+L EA K    +++T K++  
Sbjct: 518 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK----LLDTIKVHGL 573

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
           V             P+S++Y+  +N +C +G       +  E   K I   + TY  ++ 
Sbjct: 574 V-------------PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 620

Query: 526 GLIKRRK 532
           GL K  +
Sbjct: 621 GLCKEGR 627


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/417 (33%), Positives = 233/417 (55%), Gaps = 3/417 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C PD + YN ++      G+L+  R L++DM  +   P+  TYN L+ G C  G    A
Sbjct: 119 ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNA 175

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+D M +   +PDV TY +L+   C     ++A +L  EM +    PD++TYN ++N 
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A + +  L  HG +PN V++NI++K  C   + + A K++  M + G+ P+
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPN 295

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N LI   C+ G +E A  ++D + + G   N+++ N ILH  C +KK+D A   + 
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG Y D VSY TL+T   R  + + A++L  ++K++   P   +YN +I GL+++G
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT++A+++LNE++  G+ PD  T++TI  G C E ++E+A++   K+ +   +P+ V  N
Sbjct: 416 KTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYN 475

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            +L GLC+      A+  F   I  G   +  TY  LI  L  E  +++A  LL E+
Sbjct: 476 AILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 248/486 (51%), Gaps = 25/486 (5%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           VP+R   N  + G  + G L+EA+R+V+ M+  +          LI   C +G   EA R
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARR 115

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           +    E     PDV+ YN ++  +  +G+   A +L+ ++    ++P++ T+N +I+  C
Sbjct: 116 VLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLC 167

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
             G+   A  ++ +M   G  PD VTY  L++A CK    ++A +++D M  KG   + I
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +++ +C E ++D+A   L S    G   + VSY  ++ G    E+   A KL  EM
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            ++   P+  T+N +I  L + G  E A+++L+++ + G  P+  ++N I+H FC + ++
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           ++A+ F   MV +   PDIV+ N LL+ LCR G ++ A++       KG     ++YNT+
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I  L K  + ++A  LL+EM  K L PD  TY+ I + L    R+EEA +         K
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFC------K 461

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +    ++PNT           + Y+  +   C +    +A+ +F      G   N+STY 
Sbjct: 462 VQDMGIRPNT-----------VLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYT 510

Query: 522 NLMNGL 527
            L+ GL
Sbjct: 511 ILIEGL 516



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 206/376 (54%), Gaps = 19/376 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+PD VTY  +L+A  K+    +   LL +M+ +G  P+  TYN++V+G C+ G + +A
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDA 245

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +  +  +  +   P+  +YN+++ G C A   E+A +L  EM      P+VVT+N LI+ 
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISF 305

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    A +++D++ ++G  PN++++N ++  +CK+ K+D+A   V  M   G  PD
Sbjct: 306 LCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPD 365

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTL+ A C+ G ++ A  ++  +  KG     I+ NT++  L    K  EA  LLN
Sbjct: 366 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLN 425

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D ++Y T+ +G  R+++   A++ + ++++  I P+T  YNA++ GL +  
Sbjct: 426 EMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +T  AID+   ++ +G +P+E+T+  +I G   EG V++A +                  
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARE------------------ 527

Query: 365 ILLSGLCREGILEKAL 380
            LL  LC  G++ K L
Sbjct: 528 -LLGELCSRGVVSKGL 542



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 208/429 (48%), Gaps = 30/429 (6%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI--MIKWYCKEGKIDKA 169
           +P     N  +      G   EA +L++ +   G++P+A       +IK  C  G+  +A
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRTAEA 113

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
            +++   E     PD + YN ++   C  G ++ A R++  M    ++ ++ T NT++  
Sbjct: 114 RRVLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRG 165

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           LC   +   A ++L+   +RG   D V+Y  L+    +     +A+KL DEM+ +   P 
Sbjct: 166 LCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPD 225

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TYN ++ G+ Q G+ + AI+ L  L   G  P+  ++N ++ G C+  + E A +   
Sbjct: 226 IITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 285

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M +K + P++VT N+L+S LCR G++E A++        G   +S++YN ++ + CK++
Sbjct: 286 EMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQK 345

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +++ A   +  M  +   PD  +Y  + TAL   G ++ A +    + + G         
Sbjct: 346 KMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG--------- 396

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     P  ISY+  I+     G+ K+AL++  E   KG+  +  TY  + +GL  
Sbjct: 397 --------CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC- 447

Query: 530 RRKSISKAV 538
           R   I +A+
Sbjct: 448 REDRIEEAI 456



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 152/322 (47%), Gaps = 35/322 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +   GC P+ V+YN +L  L    +  +   L+++M ++G  PN  T+N+L+S  C+ G 
Sbjct: 252 LPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGL 311

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ AM V+D + +    P+  +YN +++ +C    ++ A    + M S    PD+V+YNT
Sbjct: 312 VEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNT 371

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      G    A +L+ +L + G  P  +++N +I    K GK  +A +++  M   G
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY+T+    C+   +EEA R    +   G++ NT+  N IL  LC         
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLC--------- 482

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                                     +  + + A+ L+  M     MP+  TY  +I GL
Sbjct: 483 --------------------------KRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
           +  G  ++A ++L EL   G++
Sbjct: 517 TYEGLVKEARELLGELCSRGVV 538



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  ++YNT++D L K GK  E  +LL++M  +GL P+  TY+ + SG C+   ++EA
Sbjct: 396 GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R    +      P+   YN ++ G C       A  L   M S   +P+  TY  LI  
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
               G   EA +L+ EL   G+    + +   I+ 
Sbjct: 516 LTYEGLVKEARELLGELCSRGVVSKGLINKAAIRL 550


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 278/526 (52%), Gaps = 23/526 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +N +L A+ K  K + V  L   M+   +  +  +YNIL++ +C+   L  A+ 
Sbjct: 77  LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD+ T + L+NG+C++  + +A  L  +M  +   PD VT+NTLI+  F
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLF 196

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  L+D++ + G +P+ VT+  ++   CK G ID A  +++ ME+     D V
Sbjct: 197 LHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNT+ID  CK  ++++AF + + M  KG++ +  T N+++  LC   +  +A  LL++ 
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++  LI  + ++ K   A KL+DEM +R I P  FTY+++I G     + 
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     P+  T+NT+I GFC   +VE+ ++   +M ++    + VT N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL + G  + A K F+  +  G   D +TY+ L+  LCK  +LE A  +   +++ K+
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
            PD YTY  +   + ++G++E+    F S+ ++        V+PN            I Y
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-------VKPNV-----------IIY 538

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +  I+  C +G  ++A  +F E ++ G   +   Y    N LI+ R
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY----NTLIRAR 580



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 240/444 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT +++L+      ++++   L+  M + G  P+  T+N L+ G      
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M Q    PD+ TY  ++NG C  G ++ A  L K+ME  K+  DVV YNT
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +AF L ++++  GI+P+  T+N +I   C  G+   A +++ NM E  
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT++ LIDA  K G + EA ++ D M ++ +  +  T +++++  C   +LDEA 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + + V+Y TLI G+ + ++    ++L+ EM +R ++ +T TYN +I GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G  + A  +  +++  G+ PD  T++ ++ G C  G++EKAL     + +   +PDI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F S  LKG   + + Y T+IS  C++   E+A  L  E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    PD   Y  +  A +  G
Sbjct: 561 MKEDGTLPDSGCYNTLIRARLRDG 584



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/449 (32%), Positives = 237/449 (52%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT+NT++  LF   K +E   L+  M ++G  P+  TY  +V+G CK G 
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M + K   DV  YN +I+G C    +++AF L  +ME+  + PDV TYN+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A +L+  + E  I PN VT + +I  + KEGK+ +A K+   M +  
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY++LI+  C    ++EA  M ++M  K    N +T NT++   C  K+++E  
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G F+    + A K++ +M    + P   TY+ ++ GL
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK E+A+ +   L +S M PD  T+N +I G C  G+VE        +  K  KP++
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +    ++SG CR+G+ E+A   FR     G   DS  YNTLI +  ++     +  L+ E
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 595

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M       D  T + +   ++  GRLE++
Sbjct: 596 MRSCGFVGDASTISMV-INMLHDGRLEKS 623



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 256/506 (50%), Gaps = 17/506 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           KL++   L  +M +   +P+   +N L+S   K+      + + + M   +   D+++YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           +LIN +C    L  A  +  +M  L   PD+VT ++L+N +  S R  +A  L+D++ E 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G KP+ VT N +I       K  +A  +V  M + G  PD VTY  +++  CK G+++ A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M +  ++ + +  NTI+  LC  K +D+A+ L N    +G   D  +Y +LI+ 
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                + + A +L   M ER+I P+  T++A+I    + GK  +A  + +E+++  + PD
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T++++I+GFC   ++++A      M+ K   P++VT N L+ G C+   +E+ ++ FR
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +G   ++VTYNTLI  L +    + A  +  +M    + PD  TY+ +   L + G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +LE+A                VV     K+  +++P   +Y+  I   C  G+ +D   +
Sbjct: 480 KLEKA---------------LVVFEYLQKS--KMEPDIYTYNIMIEGMCKAGKVEDGWDL 522

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
           F     KG+  N   Y  +++G  ++
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRK 548



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 212/411 (51%), Gaps = 1/411 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY  +++ L K+G ++    LL  M+K  +  +   YN ++ G CK   + +A
Sbjct: 215 GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDA 274

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M      PDV+TYN LI+  CN G   +A RL   M   K+ P+VVT++ LI+ 
Sbjct: 275 FALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDA 334

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+ +EA KL DE+ +  I P+  T++ +I  +C   ++D+A  +   M      P+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   CKA  +EE   +   M ++GL  NT+T NT++  L      D A  +  
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y  L+ G  +  K  +AL +++ +++ ++ P  +TYN MI G+ ++G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E   D+   L   G+ P+   + T+I GFC +G  E+A     +M E    PD    N
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 574

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            L+    R+G    + +  +     G   D+ T + +I+ L  + RLE ++
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 145/421 (34%), Positives = 233/421 (55%), Gaps = 3/421 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G +PD +TYN ++    K G++     LL  M    + P+  TYN ++   C  G 
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGK 227

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEAM V+D   Q +  PDV TY +LI   C    + +A +L  EM      PDVVTYN 
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + GR  EA + ++ +  +G +PN +THNI+++  C  G+   A K +  M   G
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VT+N LI+  C+ G +  A  +++ M + G   N+++ N +LH LC +KK++ A 
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+    RG Y D V+Y TL+T   +D K + A+++ +++  +   P   TYN +I GL
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ GKT+ AI +L+E+   G+ PD  T++T++ G   EG+V++A+ F + + E   KP+ 
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++ GLC+     +A+ F    + +G      +Y  LI  L  E   ++A  LL+E
Sbjct: 528 ITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNE 587

Query: 421 M 421
           +
Sbjct: 588 L 588



 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 252/471 (53%), Gaps = 3/471 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   +++  L K GK  +   ++  ++  G VP+  TYN+L+SGYCK G +  A
Sbjct: 140 GDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSA 199

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++++D M+ +   PDV TYN ++   C++G L+EA  +       +  PDV+TY  LI  
Sbjct: 200 LQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEA 256

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A KL+DE+ + G KP+ VT+N++I   CKEG++D+A + + +M   G  P+
Sbjct: 257 TCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPN 316

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N ++ + C  G   +A + +  M RKG   + +T N +++ LC +  +  A  +L 
Sbjct: 317 VITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLE 376

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + +SY  L+    +D+K  RA++  D M  R   P   TYN ++  L + G
Sbjct: 377 KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 436

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+++LN+L   G  P   T+NT+I G    G+ + A++  ++M  K  KPDI+T +
Sbjct: 437 KVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYS 496

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GL REG +++A+ FF      G   +++TYN+++  LCK R+   A   L+ M  +
Sbjct: 497 TLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR 556

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
              P   +Y  +   L   G  +EA +  + +   G +     +    K P
Sbjct: 557 GCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKIP 607



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 265/511 (51%), Gaps = 20/511 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           + V  N  L  L + G+L E    L DM  +G +P+      L+ G CK G   +A RV+
Sbjct: 109 EEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVM 168

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           +++  + ++PDV TYN+LI+G+C  G +  A +L   ++ + + PDVVTYNT++    +S
Sbjct: 169 EILEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDS 225

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  EA +++D   +    P+ +T+ I+I+  CKE  + +A K++  M + G  PD VTY
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI+  CK G ++EA R ++ M   G + N IT N IL ++C   +  +A   L    +
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G     V++  LI    R     RA+ + ++M +    P++ +YN ++  L +  K E+
Sbjct: 346 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AI+ L+ ++  G  PD  T+NT++   C +G+V+ A++  N++  K   P ++T N ++ 
Sbjct: 406 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 465

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL + G  + A+K       KG   D +TY+TL+  L +E ++++A     ++EE  + P
Sbjct: 466 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKP 525

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY +I   L ++ +   A  F + MV  G                   P+  SY   
Sbjct: 526 NAITYNSIMLGLCKARQTVRAIDFLAYMVARG-----------------CKPTETSYMIL 568

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKST 519
           I     +G  K+AL++  E   +G+    S 
Sbjct: 569 IEGLAYEGLAKEALELLNELCSRGVVKKSSA 599



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 242/469 (51%), Gaps = 20/469 (4%)

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L+E  + ++ M     +PD+     LI G C  G   +A R+ + +E    +PDV+TY
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI+ + ++G    A +L+D +    + P+ VT+N +++  C  GK+ +A +++    +
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD +TY  LI+A CK   + +A +++D M  KG K + +T N +++ +C E +LDE
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   LN     G   + +++  ++       +   A K   EM  +   PS  T+N +I 
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G   +AID+L ++ Q G  P+  ++N ++H  C + ++E+A+++ + MV +   P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DIVT N LL+ LC++G ++ A++       KG +   +TYNT+I  L K  + +DA  LL
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM+ K L PD  TY+ +   L   G+++EA  F   + E G                 +
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG-----------------V 523

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            P++I+Y+  +   C   +   A+        +G    +++YM L+ GL
Sbjct: 524 KPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 228/442 (51%), Gaps = 22/442 (4%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           V  N  + R   +G   E FK ++++   G  P+ +    +I+  CK GK  KA +++  
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           +E++G  PD +TYN LI   CK G +  A +++D   R  +  + +T NTIL TLC   K
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGK 227

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           L EA  +L+   +R  Y D ++Y  LI    ++    +A+KL DEM+++   P   TYN 
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I G+ + G+ ++AI  LN +   G  P+  T N I+   CS G+   A +F  +M+ K 
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P +VT NIL++ LCR+G++ +A+         G   +S++YN L+ +LCK++++E A 
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNT 471
             L  M  +   PD  TY  + TAL + G+++ A +  + +   G     I +  V    
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467

Query: 472 SKTPEEID--------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           SK  +  D              P  I+YS  +     +G+  +A+  F +  + G+  N 
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527

Query: 518 STYMNLMNGLIKRRKSISKAVD 539
            TY ++M GL K R+++ +A+D
Sbjct: 528 ITYNSIMLGLCKARQTV-RAID 548



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 178/332 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTYN +++ + K+G+L+E    L+ M   G  PN  T+NI++   C  G 
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A + +  M +    P V T+N+LIN  C  G++  A  + ++M      P+ ++YN 
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   +  +   A + +D +   G  P+ VT+N ++   CK+GK+D A +I+  +   G
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  +TYNT+ID   K G  ++A +++D M  KGLK + IT +T++  L  E K+DEA 
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +   + G   + ++Y +++ G  +  +  RA+     M  R   P+  +Y  +I GL
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           +  G  ++A+++LNEL   G++   +    ++
Sbjct: 573 AYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 166/545 (30%), Positives = 282/545 (51%), Gaps = 32/545 (5%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P  VT+  I+D   K  +L +       M+ + + PN  TYN++V+G CK     +A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 66  RVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLIN 123
            V+  M   KS+ PD+ TY+ +ING+C  G ++ A  + +EM +   + PDVVTY ++++
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN-MEENGFS 182
                G+   A +++ E+   G++P+  T + +I  +C   K+D+A K+ +  +  + + 
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVM-GRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           PD VTY  LID  CK+GN+E+A +M+ VM GRK +  N +T +++LH LC    LD+A  
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLDQALD 240

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L    + +G   + V+Y TLI G     K + A  L DEM      P T +YNA++ G  
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA-LQFHNKMVEKSFKPDI 360
           + G+ E+A  +  E+     +PD  T+  ++ GFC+  ++E+A     N        PD+
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT +I+++G  R     +A +F +  I +  A ++VTY++LI  LCK  R++ A  +L  
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K++ P   T+ ++  AL   G ++EA K    M   G                 ++P
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG-----------------LEP 463

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIA-------INKSTYMNLMNGLIKRRKS 533
             ++Y+  +      GR + A ++FE  R+K          + +  +  L+ GL K R+ 
Sbjct: 464 GMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKARE- 522

Query: 534 ISKAV 538
           I KA+
Sbjct: 523 IDKAM 527



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 245/465 (52%), Gaps = 9/465 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY +++D L + GK++   +++ +MK +G+ P++ T++ L++G+C    + EA
Sbjct: 108 GIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 167

Query: 65  MRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +++  +++T +   PDV TY  LI+G+C +G LE+A ++   ME  K +P+VVTY++L++
Sbjct: 168 LKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLH 227

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G   +A  L   +   G  PN VT+  +I   C   K+D A  ++  M      P
Sbjct: 228 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP 287

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V+YN L+D  C+ G +EEA ++   M  K    + IT   ++   C   +L+EA  LL
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLL 347

Query: 244 -NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N  +  G   D V+Y  ++ GY R ++   A +   EM  R + P+  TY+++I GL +
Sbjct: 348 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 407

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G+ + A+++L  ++   + P   TFN++I   C  G +++A +    M     +P +VT
Sbjct: 408 AGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVT 467

Query: 363 CNILLSGLCREGILEKALKFFR-------SWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
              LL G  R G +E A + F                V    ++ LI  LCK R ++ A 
Sbjct: 468 YTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAM 527

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            ++ E+  ++  P      AI   L+ +GR EEA K  + + + G
Sbjct: 528 AVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 193/360 (53%), Gaps = 10/360 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG  C+P+ VTY+++L  L K G L++  DL   M  +G VPN  TY  L+ G C    
Sbjct: 210 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK 269

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  ++D MT     PD  +YN L++G+C  G +EEA +L KEM +   LPD +TY  
Sbjct: 270 VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC 329

Query: 121 LINRFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           L+  F  + R  EA  L++ +    GI P+ VT++I++  Y +  +  +A + ++ M   
Sbjct: 330 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 389

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P+ VTY++LID  CKAG ++ A  ++  M  K ++ +  T N+++  LC    +DEA
Sbjct: 390 NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA 449

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK--------ERQIMPSTF 291
           + LL + +  G     V+Y TL+ G+ R  +   A +L++ M+           ++P   
Sbjct: 450 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ- 508

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
            ++A+I GL ++ + ++A+ ++ EL      P E     I+ G    G+ E+A +  N +
Sbjct: 509 AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 184/329 (55%), Gaps = 8/329 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+ VTY T++  L    K++  R L+ +M      P+  +YN L+ GYC+LG 
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYN 119
           ++EA ++   M     LPD  TY  L+ G+CNA  LEEA  L + M++   + PDVVTY+
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            ++  +  + R +EA + I E+    + PNAVT++ +I   CK G++D A ++++NM   
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P   T+N++I A C+ G+M+EA++++  M   GL+   +T  T+L       +++ A
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484

Query: 240 YMLLN-------SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           Y L          +S     + E ++  LI G  +  + ++A+ + +E++ R+  P+   
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 544

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
             A++ GL ++G+TE+A  ++N + + G+
Sbjct: 545 CLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 265/520 (50%), Gaps = 23/520 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++N++L  L +  K  E  DL          P+  +YNI++SG+C  G L  A+ +++ M
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PD +T+  +I    NAG L+ A      + S+   P+VVTY  LI  F  + + 
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA KL++E+ E G  PN VT+N+++   CK   +  A  +V+ M E GF+P+ +T+N+L
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D  CK GN+++A +++ +M  KG++ N +T + ++  LC  +K  EA  +L     RG 
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  +Y  LI G  + +K   A ++   M      P    Y+++I    +SGK  +A  
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGL 370
            L E+ +    PD  T+NT+I G C  G++ +A     +M E     PD+VT + +++GL
Sbjct: 376 TLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGL 435

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+  +L +A K        G   D VTY T+I  LCK  RLE+A  LL  M+     P+ 
Sbjct: 436 CKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNV 495

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  + + L ++ +++EA++    M   G                   P+ ++Y+  +N
Sbjct: 496 VTYTTLISGLCKARKVDEAERVMEEMRNAG-----------------CPPNLVTYNTMVN 538

Query: 491 EHCSQGRYKDALQIFEETR--QKGIAINKSTYMNLMNGLI 528
             C  GR K+A Q+ +  +  +   + + +TY  ++N L+
Sbjct: 539 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 578



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/505 (30%), Positives = 257/505 (50%), Gaps = 19/505 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD  +YN ++      G L+   +LL +MK  G  P+  T+  +++     G L  AM
Sbjct: 108 CEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM 167

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
              D +      P+V TY  LI  +  A  LEEA +L +EM      P++VTYN L++  
Sbjct: 168 ---DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 224

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +      A  ++ ++ E G  PN +T N ++  +CK G +D A K++  M   G  P+ 
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 284

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY+ LID  CK+    EA  +++ M  +G+  +  T + ++H LC   K++EA  +L  
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            +  G   D V Y ++I  + +  K   A K   EM++++  P   TYN +I GL + GK
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404

Query: 306 TEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             +A  +L ++ +SG ++PD  T++T+I+G C    + +A +  ++M +    PD+VT  
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 464

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GLC+ G LE+A    +     G A + VTY TLIS LCK R++++A  ++ EM   
Sbjct: 465 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY  +   L  SGR++EAQ+    M + G+               E  P + +
Sbjct: 525 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KDGR--------------AECSPDAAT 569

Query: 485 YSEKINEHCSQGRYKDALQIFEETR 509
           Y   +N   S    ++A Q+ E+ +
Sbjct: 570 YRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 243/426 (57%), Gaps = 5/426 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +   GC P+ VTY  ++ A  +  KL E   LL +M+++G  PN  TYN+LV   CKL  
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  VV  M +    P+V T+N L++G+C  G +++A +L   M +  + P+VVTY+ 
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 289

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +S + +EA ++++E+   G+ P+A T++ +I   CK  KI++A +++R M  +G
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD V Y+++I A CK+G + EA + +  M ++    + +T NT++  LC   K+ EA 
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409

Query: 241 MLLNSASKRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           ++L    + G  L D V+Y T+I G  + +    A KL D M +    P   TY  +I G
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 469

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+ E+A  +L  + ++G  P+  T+ T+I G C   +V++A +   +M      P+
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKA---VDSVTYNTLISSLCKERRLEDAFG 416
           +VT N +++GLC  G +++A +  +  +  G+A    D+ TY T++++L     +++A  
Sbjct: 530 LVTYNTMVNGLCVSGRIKEAQQLVQR-MKDGRAECSPDAATYRTIVNALMSSDLVQEAEQ 588

Query: 417 LLSEME 422
           LL +M+
Sbjct: 589 LLEQMK 594



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 244/462 (52%), Gaps = 6/462 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  T+  I+ A+   G L+   D L  M   G  PN  TY  L++ + +   
Sbjct: 138 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKK 194

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EAM++++ M +    P++ TYN+L++  C   M+  A  + K+M      P+V+T+N+
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + G   +A KL+  +   G++PN VT++ +I   CK  K  +A +++  M+  G
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  TY+ LI   CKA  +EEA +M+  M   G   + +  ++I+H  C   KL EA 
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER-QIMPSTFTYNAMIWG 299
             L    K+    D V+Y T+I G  +  K   A  + ++M+E   ++P   TY+ +I G
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVING 434

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +S    +A  +L+ + ++G  PD  T+ TII G C  G++E+A      M      P+
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 494

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT   L+SGLC+   +++A +        G   + VTYNT+++ LC   R+++A  L+ 
Sbjct: 495 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 554

Query: 420 EMEEKK--LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            M++ +    PD  TY  I  AL+ S  ++EA++    M  T
Sbjct: 555 RMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKST 596



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 217/421 (51%), Gaps = 21/421 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PDV +YN +I+ F  +G    A +L++E+   G  P+A TH  +I      G +D A   
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +R+M   G  P+ VTY  LI A  +A  +EEA ++++ M  +G   N +T N ++  LC 
Sbjct: 170 LRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
              +  A  ++    + G+  + +++ +L+ G+ +    + A KL   M  + + P+  T
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y+A+I GL +S K  +A ++L E+   G+ PD  T++ +IHG C   ++E+A Q   +M 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                PD+V  + ++   C+ G L +A K  +    + K+ D VTYNT+I  LCK  ++ 
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 413 DAFGLLSEMEEK-KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           +A  +L +M+E   + PD  TY+ +   L +S  L EAQK    M + G           
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG----------- 455

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                  +P  ++Y+  I+  C  GR ++A  + +  ++ G A N  TY  L++GL K R
Sbjct: 456 ------CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR 509

Query: 532 K 532
           K
Sbjct: 510 K 510



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 183/386 (47%), Gaps = 21/386 (5%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G    A + N +++   +  K  +A  + R+       PD  +YN +I   C AG++  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +++ M   G   +  T   I+  +     LD A   L S    G   + V+Y  LI  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + R +K   A+KL +EM+ER   P+  TYN ++  L +      A D++ ++++ G  P+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             TFN+++ GFC  G V+ A +    MV K  +P++VT + L+ GLC+     +A +   
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +G   D+ TY+ LI  LCK  ++E+A  +L  M      PD   Y++I  A  +SG
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L EAQK    M +  K                  P  ++Y+  I+  C  G+  +A  I
Sbjct: 369 KLLEAQKTLQEMRKQRK-----------------SPDVVTYNTVIDGLCKLGKIAEAQVI 411

Query: 505 FEETRQKG-IAINKSTYMNLMNGLIK 529
            E+ ++ G +  +  TY  ++NGL K
Sbjct: 412 LEQMQESGDVLPDVVTYSTVINGLCK 437



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 135/300 (45%), Gaps = 20/300 (6%)

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           + KL  A+     AS  G+     S+ +L+    R +K   A  L+         P   +
Sbjct: 55  DAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCS 114

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I G   +G    A+++L E+  +G  PD  T   II    + G ++ A+     M 
Sbjct: 115 YNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM- 173

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                P++VT   L++   R   LE+A+K       +G   + VTYN L+ +LCK   + 
Sbjct: 174 --GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVG 231

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  ++ +M E    P+  T+ ++     + G +++A+K   IMV  G            
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG------------ 279

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                + P+ ++YS  I+  C   ++ +A ++ EE + +G+  +  TY  L++GL K  K
Sbjct: 280 -----MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADK 334


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 261/520 (50%), Gaps = 19/520 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P++VTY+ ++D   ++GKL+     L +M   GL  +   YN L++G+CK G 
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A   +  M   K  P V TY  L+ G+C+ G + +A RL  EM    + P + T+ T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  F +G   +A KL +E+ E  +KPN VT+N+MI+ YC+EG + KA + ++ M E G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  +Y  LI   C  G   EA   +D + +   ++N I    +LH  C E KL+EA 
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     +RG  LD V YG LI G  + +       L  EM +R + P    Y +MI   
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++G  ++A  + + ++  G +P+E T+  +I+G C  G V +A    +KM   S  P+ 
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752

Query: 361 VTCNILLSGLCREGI-LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           VT    L  L +  + ++KA++   + ILKG   ++ TYN LI   C++ R+E+A  L++
Sbjct: 753 VTYGCFLDILTKGEVDMQKAVELHNA-ILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M    + PD  TY  +   L     +++A +  + M E G                 I 
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG-----------------IR 854

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           P  ++Y+  I+  C  G    A ++  E  ++G+  N  T
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 267/539 (49%), Gaps = 17/539 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC  + V YN ++D L KK K+ E   +  D+  + L P+  TY  LV G CK+  
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  + ++D M   +  P     + L+ G    G +EEA  L K +    + P++  YN 
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +  +  EA  L D + + G++PN VT++I+I  +C+ GK+D A   +  M + G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                  YN+LI+ +CK G++  A   M  M  K L+   +T  +++   C + K+++A 
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + +G      ++ TL++G FR      A+KL++EM E  + P+  TYN MI G 
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A + L E+ + G++PD  ++  +IHG C  GQ  +A  F + + + + + + 
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +    LL G CREG LE+AL   +  + +G  +D V Y  LI    K +  +  FGLL E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L PD   Y ++  A  ++G  +EA     +M+  G +                 P
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-----------------P 715

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           + ++Y+  IN  C  G   +A  +  + +      N+ TY   ++ L K    + KAV+
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 237/496 (47%), Gaps = 17/496 (3%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           + K  L+P   T + L+ G  K      AM + + M      PDV+ Y  +I   C    
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L  A  +   ME+     ++V YN LI+   +  +  EA  +  +L    +KP+ VT+  
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++   CK  + +   +++  M    FSP     ++L++   K G +EEA  ++  +   G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  N    N ++ +LC  +K  EA +L +   K G   ++V+Y  LI  + R  K + AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
               EM +  +  S + YN++I G  + G    A   + E++   + P   T+ +++ G+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           CS+G++ KAL+ +++M  K   P I T   LLSGL R G++  A+K F          + 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYN +I   C+E  +  AF  L EM EK + PD Y+Y  +   L  +G+  EA+ F   
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           +       H+             + + I Y+  ++  C +G+ ++AL + +E  Q+G+ +
Sbjct: 603 L-------HK----------GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645

Query: 516 NKSTYMNLMNGLIKRR 531
           +   Y  L++G +K +
Sbjct: 646 DLVCYGVLIDGSLKHK 661



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 218/433 (50%), Gaps = 37/433 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VTY +++     KGK+N+   L  +M  +G+ P+  T+  L+SG  + G +++A+++
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M +    P+  TYN++I G+C  G + +AF   KEM    ++PD  +Y  LI+    
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI--------------- 172
           +G++ EA   +D L +   + N + +  ++  +C+EGK+++A  +               
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649

Query: 173 --------------------VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                               ++ M + G  PD V Y ++IDA  K G+ +EAF + D+M 
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE-KA 271
            +G   N +T   +++ LC    ++EA +L +         ++V+YG  +    + E   
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +A++L + +  + ++ +T TYN +I G  + G+ E+A +++  ++  G+ PD  T+ T+
Sbjct: 770 QKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+  C    V+KA++  N M EK  +PD V  N L+ G C  G + KA +     + +G 
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

Query: 392 AVDSVTYNTLISS 404
             ++ T  T  S+
Sbjct: 889 IPNNKTSRTTTSN 901



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 4/227 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+V Y +++DA  K G   E   +   M  +G VPN  TY  +++G CK G+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM-LEEAFRLRKEMESLK-LLPDVVTY 118
           + EA  +   M    S+P+  TY   ++      + +++A  L   +  LK LL +  TY
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI--LKGLLANTATY 790

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI  F   GR  EA +LI  +   G+ P+ +T+  MI   C+   + KA ++  +M E
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
            G  PD V YNTLI   C AG M +A  + + M R+GL  N  T  T
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 162/537 (30%), Positives = 276/537 (51%), Gaps = 31/537 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+ T+L  L  + +++E  D    M +    PN  T+  L++G C+ G + E
Sbjct: 143 LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLI 122
           A+ ++D M ++   P   TY  +++G C  G    A  L ++ME +  ++P+VV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  +A  L  E+ E GI P+  T+N MI  +C  G+   A ++++ M E   S
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN LI+A  K G   EA  + D M  +G+  NTIT ++++   C + +LD A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   + +++ TLI GY   ++ +  ++L  EM E  ++  T TYN +I G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK----- 357
            G    A+D+L E++ SG+ PD  T +T++ G C  G+++ AL+   K+++KS K     
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKKDLDAS 501

Query: 358 -------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                  PD+ T NIL+SGL  EG   +A + +     +G   D++TY+++I  LCK+ R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  +   M  K   P+  T+  +     ++GR+++  +   +  E G+         
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR--------- 609

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  I  ++I+Y   I      G    AL IF+E    G+  +  T  N++ GL
Sbjct: 610 -----RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 167/581 (28%), Positives = 280/581 (48%), Gaps = 67/581 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  ++  + +  + + V  L   M+++ +  +  ++NIL+  +C    L  A+ 
Sbjct: 76  LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALS 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+  L++G C    + EA     +M      P+VVT+ TL+N   
Sbjct: 136 TFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++P  +T+  ++   CK+G    A  ++R MEE +   P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID+ CK G   +A  +   M  KG+  +  T N+++   C   +  +A  LL  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V+Y  LI  + ++ K   A +L+DEM  R I+P+T TY++MI G  +  +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 306 TEQA-----------------------------------IDMLNELLQSGMIPDETTFNT 330
            + A                                   +++L+E+ ++G++ D TT+NT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGF   G +  AL    +M+     PDIVTC+ LL GLC  G L+ AL+ F+      
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D  TYN LIS L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 440 LVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           L +  RL+EA Q F S+                    +   P+ ++++  IN +C  GR 
Sbjct: 556 LCKQSRLDEATQMFDSM------------------GSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            D L++F E  ++GI  N  TY+ L+ G  ++  +I+ A+D
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF-RKVGNINGALD 637



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 239/457 (52%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  +TY TI+D + KKG      +LL  M++   ++PN   Y+ ++   CK G   +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +    PD++TYN +I G+C++G   +A +L +EM   K+ PDVVTYN LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T++ MI  +CK+ ++D A  +   M   G SP
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +T+NTLID  C A  +++   ++  M   GL  +T T NT++H       L+ A  LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q  + M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT   L++G C+ G ++  L+ F     +G   +++TY TLI    K   + 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T L     L+ A
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 256/515 (49%), Gaps = 21/515 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL-------MTQNKSLP 78
           L +  DL SDM +   +P+       V  +CKL  +   M   DL       M + +   
Sbjct: 60  LEDAIDLFSDMLRSRPLPS-------VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++N+LI  +C+   L  A     ++  L L PDVVT+ TL++      R  EA    
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++ E   +PN VT   ++   C+EG+I +A  ++  M E+G  P  +TY T++D  CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +  N +  + I+ +LC + +  +A  L     ++G + D  +
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y ++I G+    + + A +L  EM ER+I P   TYNA+I    + GK  +A ++ +E+L
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+IP+  T++++I GFC + +++ A      M  K   P+++T N L+ G C    ++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             ++        G   D+ TYNTLI        L  A  LL EM    L PD  T   + 
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G+L++A +   +M ++ K        + S     ++P   +Y+  I+   ++G+
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKK------DLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + +A +++EE   +GI  +  TY ++++GL K+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 11/355 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN +++A  K+GK  E  +L  +M  +G++PN  TY+ ++ G+CK   L  A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM      P++ T+N LI+G+C A  +++   L  EM    L+ D  TYNTLI+ F+ 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G    A  L+ E+   G+ P+ VT + ++   C  GK+  A ++ + M++         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 179 --NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             NG  PD  TYN LI      G   EA  + + M  +G+  +TIT ++++  LC + +L
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  + +S   + +  + V++ TLI GY +  + +  L+L+ EM  R I+ +  TY  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           I G  + G    A+D+  E++ SG+ PD  T   ++ G  S+ ++++A+    K+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 218/451 (48%), Gaps = 59/451 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V Y+ I+D+L K G+ ++ ++L ++M+++G+ P+  TYN ++ G+C  G   +A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-------- 118
           ++  M + K  PDV TYN LIN +   G   EA  L  EM    ++P+ +TY        
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 119 ---------------------------NTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                      NTLI+ +  + R  +  +L+ E+ E G+  +  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I  +   G ++ A  +++ M  +G  PD VT +TL+D  C  G +++A  M  VM
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            +                   +K LD ++         G   D  +Y  LI+G   + K 
Sbjct: 492 QKS------------------KKDLDASHPF------NGVEPDVQTYNILISGLINEGKF 527

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L++EM  R I+P T TY++MI GL +  + ++A  M + +      P+  TF T+
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G+C  G+V+  L+   +M  +    + +T   L+ G  + G +  AL  F+  I  G 
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             D++T   +++ L  +  L+ A  +L +++
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 176/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TY++++D   K+ +L+    +   M  +G  PN  T+N L+ GYC    + + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  MT+   + D  TYN LI+G+   G L  A  L +EM S  L PD+VT +TL++ 
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK++     +LD     +G++P+  T+NI+I     EGK  +A ++ 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M D MG K    N +T  T+++  C  
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   + ++Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ GL    + ++A+ ML +L  S
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 155/319 (48%), Gaps = 21/319 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G    ++ L +  H +   K L++A  L +   +       V +  L+    R E+ +  
Sbjct: 42  GFGGESLKLQSGFHEI---KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M+ +QI    +++N +I       K   A+    ++ + G+ PD  TF T++HG
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C E +V +AL F ++M E + +P++VT   L++GLCREG + +A+      +  G    
Sbjct: 159 LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +TY T++  +CK+     A  LL +MEE   + P+   Y+AI  +L + GR  +AQ   
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + M E G                 I P   +Y+  I   CS GR+ DA Q+ +E  ++ I
Sbjct: 279 TEMQEKG-----------------IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 514 AINKSTYMNLMNGLIKRRK 532
           + +  TY  L+N  +K  K
Sbjct: 322 SPDVVTYNALINAFVKEGK 340


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 142/405 (35%), Positives = 226/405 (55%), Gaps = 3/405 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G +PD +TYN ++    K G++++   +L  M    + P+  TYN ++   C  G 
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGK 224

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEAM V+D   Q +  PDV TY +LI   CN   + +A +L  EM      PDVVTYN 
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + GR  EA K ++ +  +G +PN +THNI+++  C  G+   A +++ +M   G
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VT+N LI+  C+   +  A  +++ M + G   N+++ N +LH  C EKK+D A 
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG Y D V+Y TL+T   +D KA+ A+++ +++  +   P   TYN +I GL
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++ GKTE A ++L E+ + G+ PD  T++T++ G   EG+V++A++  + M   S KP  
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT N ++ GLC+     +A+ F    + KG      TY  LI  +
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 145/440 (32%), Positives = 245/440 (55%), Gaps = 11/440 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   +++    + GK  +   ++  ++  G VP+  TYN+L+ GYCK G + +A
Sbjct: 137 GDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKA 196

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V++ M+     PDV TYN ++   C++G L+EA  +       +  PDV+TY  LI  
Sbjct: 197 LQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEA 253

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                   +A KL+DE+ + G KP+ VT+N++I   CKEG++D+A K + NM   G  P+
Sbjct: 254 TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPN 313

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+N ++ + C  G   +A R++  M RKG   + +T N +++ LC ++ L  A  +L 
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   + +SY  L+ G+ +++K +RA++  + M  R   P   TYN ++  L + G
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+++LN+L   G  P   T+NT+I G    G+ E A +   +M  K  KPDI+T +
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEME 422
            LL GL  EG +++A+K F    ++G ++   +VTYN ++  LCK ++   A   L+ M 
Sbjct: 494 TLLRGLGCEGKVDEAIKIFHD--MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV 551

Query: 423 EKKLGPDRYTYAAIHTALVE 442
           EK   P + TY    T L+E
Sbjct: 552 EKGCKPTKATY----TILIE 567



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 245/447 (54%), Gaps = 3/447 (0%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  L  L + G+L E    L  M  QG +P+      L+ G+C+ G  ++A R+++++  
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
           + ++PDV TYN+LI G+C +G +++A ++   +E + + PDVVTYNT++    +SG+  E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKE 227

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +++D   +    P+ +T+ I+I+  C +  + +A K++  M + G  PD VTYN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK G ++EA + ++ M   G + N IT N IL ++C   +  +A  LL    ++G   
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
             V++  LI    R     RA+ + ++M +   MP++ +YN ++ G  Q  K ++AI+ L
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             ++  G  PD  T+NT++   C +G+ + A++  N++  K   P ++T N ++ GL + 
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G  E A +       KG   D +TY+TL+  L  E ++++A  +  +ME   + P   TY
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETG 460
            AI   L ++ +   A  F + MVE G
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKG 554



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 251/480 (52%), Gaps = 22/480 (4%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           NI +    + G L+E ++ ++ M     +PDV     LI G+C +G   +A R+ + +E+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
              +PDV+TYN LI  + +SG   +A ++++ +    + P+ VT+N +++  C  GK+ +
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKE 227

Query: 169 ACKIV-RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           A +++ R M+   + PD +TY  LI+A C    + +A +++D M +KG K + +T N ++
Sbjct: 228 AMEVLDRQMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 286

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           + +C E +LDEA   LN+    G   + +++  ++       +   A +L  +M  +   
Sbjct: 287 NGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCS 346

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           PS  T+N +I  L +     +AID+L ++ + G +P+  ++N ++HGFC E ++++A+++
Sbjct: 347 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEY 406

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              MV +   PDIVT N LL+ LC++G  + A++       KG +   +TYNT+I  L K
Sbjct: 407 LEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             + E A  LL EM  K L PD  TY+ +   L   G+++EA K    M           
Sbjct: 467 VGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGL-------- 518

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     I PS+++Y+  +   C   +   A+       +KG    K+TY  L+ G+
Sbjct: 519 ---------SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 182/380 (47%), Gaps = 20/380 (5%)

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           NI ++   + G++++  K +  M   G  PD +   +LI   C++G   +A R+M+++  
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
            G   + IT N ++   C   ++D+A  +L   S      D V+Y T++       K   
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKE 227

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A+++ D   +R+  P   TY  +I          QA+ +L+E+ + G  PD  T+N +I+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C EG++++A++F N M     +P+++T NI+L  +C  G    A +     + KG + 
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
             VT+N LI+ LC++R L  A  +L +M +    P+  +Y  +     +  +++ A ++ 
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            IMV  G                   P  ++Y+  +   C  G+   A++I  +   KG 
Sbjct: 408 EIMVSRG-----------------CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC 450

Query: 514 AINKSTYMNLMNGLIKRRKS 533
           +    TY  +++GL K  K+
Sbjct: 451 SPVLITYNTVIDGLTKVGKT 470



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 56/284 (19%)

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           F  N  +  L ++G+ E+ +  L  ++  G IPD     ++I GFC  G+  KA +    
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           +      PD++T N+L+ G C+ G ++KAL+      +   A D VTYNT++ SLC   +
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGK 224

Query: 411 LED-----------------------------------AFGLLSEMEEKKLGPDRYTYAA 435
           L++                                   A  LL EM +K   PD  TY  
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   + + GRL+EA KF + M   G       QPN            I+++  +   CS 
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYG------CQPNV-----------ITHNIILRSMCST 327

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           GR+ DA ++  +  +KG + +  T+  L+N L ++R  + +A+D
Sbjct: 328 GRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRL-LGRAID 370



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 20/206 (9%)

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           +E   N  +      G++E+ L+F  +M+ +   PD++ C  L+ G CR G   KA +  
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                 G   D +TYN LI   CK   ++ A  +L  M    + PD  TY  I  +L +S
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDS 222

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G+L+EA +          ++ Q+ +        E  P  I+Y+  I   C+      A++
Sbjct: 223 GKLKEAMEV---------LDRQMQR--------ECYPDVITYTILIEATCNDSGVGQAMK 265

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           + +E R+KG   +  TY  L+NG+ K
Sbjct: 266 LLDEMRKKGCKPDVVTYNVLINGICK 291


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 151/445 (33%), Positives = 241/445 (54%), Gaps = 1/445 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD VT  T++  ++ +  + +   L  +M K+GL+ +  TY IL++G CK      A
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA 1070

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++ + M  N    DV+TY M+I+  C  GM  EA  +  EM    +LPDVV Y++L++ 
Sbjct: 1071 IKLHEKMKGNCK-GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 1129

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                GR  EA +   E++  GI  +  T+N +I    + G   +    +  M + GFSPD
Sbjct: 1130 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 1189

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+  LID  CK G + EA +++++M  KG + + +T NT+++ LC   +L++A  L  
Sbjct: 1190 AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 1249

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            S + RG  L+  SY  LI GY +D+K + A + ++EM+ + + PST TYN +I  L QSG
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            +   A  +  E+   G     +T+  ++ G C  G +E+A+     + +   KP+I   +
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFS 1369

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ILL G+CR G LE+A K F      G   D++ YN LI+ LC +  L +A  LL +MEEK
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 1429

Query: 425  KLGPDRYTYAAIHTALVESGRLEEA 449
               PD  T+  I   L++   + EA
Sbjct: 1430 GCLPDSITFNVIIQNLLKENEIHEA 1454



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 194/367 (52%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M G G LPD V Y++++D L + G+L E  +   +M+ +G+  +  TYN L+ G  + G 
Sbjct: 1111 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 1170

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             KE    ++LM      PD +T+ +LI+G C  G + EA ++ + M      PD++TYNT
Sbjct: 1171 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNT 1230

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L+N     G+  +A KL + L + GIK N  ++NI+I  YCK+ KID+A +    M   G
Sbjct: 1231 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKG 1290

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              P  VTYNTLI A C++G +  A ++   M   G  +   T   +L  LC    L+EA 
Sbjct: 1291 LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAM 1350

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L  S  K  +  +   +  L+ G  R  K   A K +DE+ +  + P T  YN +I GL
Sbjct: 1351 DLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 1410

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               G   +A+ +L ++ + G +PD  TFN II     E ++ +A+Q   +M  ++F PD 
Sbjct: 1411 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDE 1470

Query: 361  VTCNILL 367
               ++LL
Sbjct: 1471 AVTSMLL 1477



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 203/378 (53%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            C  D  TY  I+DAL K G   E  D+ S+M   G++P+   Y+ L+ G C+ G LKEA+
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                 M       DV+TYN LI+G   AG+ +E       M      PD  T+  LI+  
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             + G+  EA ++++ +   G +P+ +T+N ++   C  G+++ A K+  ++ + G   + 
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             +YN LI+  CK   ++EAFR  + M  KGLK +T+T NT++  LC   ++  A  L   
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                G +L   +Y  L+ G  ++     A+ L+  +K+ +  P+   ++ ++ G+ ++GK
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             E+A    +E+ ++G+ PD   +N +I+G C++G + +A++   +M EK   PD +T N+
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440

Query: 366  LLSGLCREGILEKALKFF 383
            ++  L +E  + +A++  
Sbjct: 1441 IIQNLLKENEIHEAIQLL 1458



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 248/524 (47%), Gaps = 20/524 (3%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            +P   T+N +L ++ K G  + V  +   +   G+ P+  T NIL+   C L  +     
Sbjct: 943  MPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFG 1002

Query: 67   VVDLMTQNKSLPDVWTYNMLING-WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V     +    PD  T   L+ G W   G + +A +L  EM    LL D  TY  LIN  
Sbjct: 1003 VFGGFLKRGFEPDAVTVTTLVKGVWMENG-IPDAVQLFDEMTKKGLLGDAKTYGILINGL 1061

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             ++ ++  A KL +++ +   K +  T+ ++I   CK+G   +A  +   M   G  PD 
Sbjct: 1062 CKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDV 1120

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            V Y++L+D  C+ G ++EA      M  +G+  +  T N+++H L       E    LN 
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               RG+  D  ++  LI G  ++ K   A ++ + M+ +   P   TYN ++ GL   G+
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             E A  +   L   G+  +  ++N +I+G+C + ++++A +F  +M  K  KP  VT N 
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            L+  LC+ G +  A K F      G+ +   TY  L+  LCK   LE+A  L   +++ +
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360

Query: 426  LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
              P+   ++ +   +  +G+LEEA K    + + G                 ++P +I+Y
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG-----------------LEPDTIAY 1403

Query: 486  SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +  IN  C++G   +A+++  +  +KG   +  T+  ++  L+K
Sbjct: 1404 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 1447



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 230/487 (47%), Gaps = 18/487 (3%)

Query: 38   KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
            K+G  P+  T   LV G      + +A+++ D MT+   L D  TY +LING C A    
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068

Query: 98   EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
             A +L ++M+      DV TY  +I+   + G + EA  +  E+   GI P+ V ++ ++
Sbjct: 1069 LAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127

Query: 158  KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
               C+ G++ +A +  + ME  G S D  TYN+LI    +AG  +E    +++M  +G  
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187

Query: 218  MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
             +  T   ++  LC E K+ EA  +L     +G   D ++Y TL+ G     +   A KL
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247

Query: 278  WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            ++ + +R I  + F+YN +I G  +  K ++A     E+   G+ P   T+NT+I   C 
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307

Query: 338  EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
             G+V  A +   +M        + T  +LL GLC+ G LE+A+  F+S        +   
Sbjct: 1308 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEV 1367

Query: 398  YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
            ++ L+  +C+  +LE+A+    E+ +  L PD   Y  +   L   G L EA K    M 
Sbjct: 1368 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 1427

Query: 458  ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
            E G +                 P SI+++  I     +    +A+Q+ EE R +  + ++
Sbjct: 1428 EKGCL-----------------PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDE 1470

Query: 518  STYMNLM 524
            +    L+
Sbjct: 1471 AVTSMLL 1477



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 239/514 (46%), Gaps = 21/514 (4%)

Query: 34   SDMKKQGLVPNRTTYNILVSGYCKLGWLK--EAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
            S  +K G   + + +   V   C+ G +K  +A+++ D    ++ +P   T+N L+    
Sbjct: 898  SKSEKIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVA 957

Query: 92   NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
              G     F + +++  + + PD+ T N LI+           F +     + G +P+AV
Sbjct: 958  KLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAV 1017

Query: 152  THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            T   ++K    E  I  A ++   M + G   D  TY  LI+  CKA     A ++ + M
Sbjct: 1018 TVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM 1077

Query: 212  GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             +   K +  T   I+  LC +    EA  + +     G   D V Y +L+ G  R  + 
Sbjct: 1078 -KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRL 1136

Query: 272  NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
              AL+ + EM+ R I    +TYN++I GLS++G  ++    LN ++  G  PD  TF  +
Sbjct: 1137 KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTIL 1196

Query: 332  IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
            I G C EG+V +A Q    M  K  +PDI+T N L++GLC  G LE A K F S   +G 
Sbjct: 1197 IDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 1256

Query: 392  AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++  +YN LI+  CK++++++AF    EM  K L P   TY  +  AL +SGR+  AQK
Sbjct: 1257 KLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQK 1316

Query: 452  FTSIMVETGKI----NHQVVQPNTSKTPEEIDPSSISYSEKINEH--------------C 493
                M   G+      + V+     K     +   +  S K  EH              C
Sbjct: 1317 LFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMC 1376

Query: 494  SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              G+ ++A + F+E  + G+  +   Y  L+NGL
Sbjct: 1377 RAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 1410



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 174/317 (54%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD  T+  ++D L K+GK+ E + +L  M+ +G  P+  TYN L++G C +G L++A
Sbjct: 1185 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ + +       +V++YN+LING+C    ++EAFR  +EM    L P  VTYNTLI  
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGA 1304

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +SGR   A KL  E+   G      T+ +++   CK G +++A  + +++++    P+
Sbjct: 1305 LCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPN 1364

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               ++ L+D  C+AG +EEA++  D + + GL+ +TI  N +++ LC +  L EA  LL 
Sbjct: 1365 IEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLW 1424

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               ++G   D +++  +I    ++ + + A++L +EM+ R   P     + ++   S   
Sbjct: 1425 QMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDP 1484

Query: 305  KTEQAIDMLNELLQSGM 321
            +   A+  L   LQ G+
Sbjct: 1485 QWHAALVSLPNALQKGV 1501


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 269/525 (51%), Gaps = 21/525 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +N +L A+ K  K + V  L   M+   +  +  +YNIL++ +C+   L  A+ 
Sbjct: 77  LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD+ T + L+NG+C+   + EA  L  +M  ++  P+ VT+NTLI+  F
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  LID +   G +P+  T+  ++   CK G ID A  +++ ME+     D V
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y T+IDA C   N+ +A  +   M  KG++ N +T N+++  LC   +  +A  LL+  
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++  LI  + ++ K   A KL+DEM +R I P  FTY+++I G     + 
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     P+  T+NT+I GFC   +VE+ ++   +M ++    + VT N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL + G  + A K F+  +  G   D +TY+ L+  LCK  +LE A  +   +++ K+
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD YTY  +   + ++G++E+       +   G      V+PN            I Y+
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG------VKPNV-----------IIYT 539

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I+  C +G  ++A  +F E ++ G   N  TY    N LI+ R
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTY----NTLIRAR 580



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 237/444 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT +++L+      +++E   L+  M      PN  T+N L+ G      
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ ++D M      PD++TY  ++NG C  G ++ A  L K+ME  K+  DVV Y T
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+         +A  L  E+D  GI+PN VT+N +I+  C  G+   A +++ +M E  
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT++ LIDA  K G + EA ++ D M ++ +  +  T +++++  C   +LDEA 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + + V+Y TLI G+ + ++    ++L+ EM +R ++ +T TYN +I GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G  + A  +  +++  G+ PD  T++ ++ G C  G++EKAL     + +   +PDI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F S  LKG   + + Y T+IS  C++   E+A  L  E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    P+  TY  +  A +  G
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDG 584



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 233/442 (52%), Gaps = 1/442 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+NT++  LF   K +E   L+  M  +G  P+  TY  +V+G CK G +  A+ +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K   DV  Y  +I+  CN   + +A  L  EM++  + P+VVTYN+LI     
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A +L+ ++ E  I PN VT + +I  + KEGK+ +A K+   M +    PD  T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++LI+  C    ++EA  M ++M  K    N +T NT++   C  K+++E   L    S
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RG   + V+Y TLI G F+    + A K++ +M    + P   TY+ ++ GL + GK E
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +   L +S M PD  T+N +I G C  G+VE        +  K  KP+++    ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SG CR+G+ E+A   FR     G   +S TYNTLI +  ++     +  L+ EM      
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602

Query: 428 PDRYTYAAIHTALVESGRLEEA 449
            D  T + +   ++  GRLE++
Sbjct: 603 GDASTISMV-INMLHDGRLEKS 623



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M Q++ LP +  +N L++        +    L + M++L++  D+ +YN 
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  ++ ++ + G +P+ VT + ++  YC   +I +A  +V  M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ VT+NTLI          EA  ++D M  +G + +  T  T+++ LC    +D A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    K     D V Y T+I      +  N AL L+ EM  + I P+  TYN++I  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + P+  TF+ +I  F  EG++ +A + +++M+++S  PDI
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T + L++G C    L++A   F   I K    + VTYNTLI   CK +R+E+   L  E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L  +  TY  +   L ++G  + AQK    MV  G                 + P
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-----------------VPP 463

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I+YS  ++  C  G+ + AL +FE  ++  +  +  TY  ++ G+ K  K
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 210/415 (50%), Gaps = 1/415 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TY T+++ L K+G ++    LL  M+K  +  +   Y  ++   C    
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M      P+V TYN LI   CN G   +A RL  +M   K+ P+VVT++ 
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ +EA KL DE+ +  I P+  T++ +I  +C   ++D+A  +   M    
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYNTLI   CKA  +EE   +   M ++GL  NT+T NT++  L      D A 
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G   D ++Y  L+ G  +  K  +AL +++ +++ ++ P  +TYN MI G+
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK E   D+   L   G+ P+   + T+I GFC +G  E+A     +M E    P+ 
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T N L+    R+G    + +  +     G   D+ T + +I+ L  + RLE ++
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 173/368 (47%), Gaps = 17/368 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D A  +   M ++   P  V +N L+ A  K    +    + + M    +  +  + N
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C   +L  A  +L    K GY  D V+  +L+ GY   ++ + A+ L D+M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +  P+T T+N +I GL    K  +A+ +++ ++  G  PD  T+ T+++G C  G ++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L    KM +   + D+V    ++  LC    +  AL  F     KG   + VTYN+LI  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M E+K+ P+  T++A+  A V+ G+L EA+K    M++      
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 353

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP   +YS  IN  C   R  +A  +FE    K    N  TY  L+
Sbjct: 354 -----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402

Query: 525 NGLIKRRK 532
            G  K ++
Sbjct: 403 KGFCKAKR 410



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 141/311 (45%), Gaps = 25/311 (8%)

Query: 247 SKRGYYLDEVSYG---TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           S RG Y    SY     L      D K + A+ L+ EM + + +PS   +N ++  +++ 
Sbjct: 34  SLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM 93

Query: 304 GKTEQAIDMLNELLQSGMIP-DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            K +  I  L E +Q+  I  D  ++N +I+ FC   Q+  AL    KM++  ++PDIVT
Sbjct: 94  NKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + LL+G C    + +A+       +     ++VT+NTLI  L    +  +A  L+  M 
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----------- 471
            +   PD +TY  +   L + G ++ A      M E GKI   VV   T           
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNV 271

Query: 472 --------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                       + I P+ ++Y+  I   C+ GR+ DA ++  +  ++ I  N  T+  L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331

Query: 524 MNGLIKRRKSI 534
           ++  +K  K +
Sbjct: 332 IDAFVKEGKLV 342


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 272/536 (50%), Gaps = 19/536 (3%)

Query: 3   GFGCLPD-NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           GF    D N++Y   L +     K ++  DL  DM +   +P    +N L S   K    
Sbjct: 45  GFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +  + +   M        ++T +++IN +C    L  AF    ++  L   PD V +NTL
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +N      R  EA +L+D + E G KP  +T N ++   C  GK+  A  ++  M E GF
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTY  +++  CK+G    A  ++  M  + +K++ +  + I+  LC +  LD A+ 
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L N    +G+  D ++Y TLI G+    + +   KL  +M +R+I P+  T++ +I    
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + GK  +A  +L E++Q G+ P+  T+N++I GFC E ++E+A+Q  + M+ K   PDI+
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T NIL++G C+   ++  L+ FR   L+G   ++VTYNTL+   C+  +LE A  L  EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             +++ PD  +Y  +   L ++G LE+A +        GKI          K+  E+D  
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEI------FGKI---------EKSKMELDIG 509

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
              Y   I+  C+  +  DA  +F     KG+ ++   Y N+M   + R+ S+SKA
Sbjct: 510 --IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY-NIMISELCRKDSLSKA 562



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 235/426 (55%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V +NT+L+ L  + +++E  +L+  M + G  P   T N LV+G C  G + +A+ +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +    P+  TY  ++N  C +G    A  L ++ME   +  D V Y+ +I+   +
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    AF L +E++  G K + +T+N +I  +C  G+ D   K++R+M +   SP+ VT
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++ LID+  K G + EA +++  M ++G+  NTIT N+++   C E +L+EA  +++   
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D +++  LI GY +  + +  L+L+ EM  R ++ +T TYN ++ G  QSGK E
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +  E++   + PD  ++  ++ G C  G++EKAL+   K+ +   + DI    I++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G+C    ++ A   F S  LKG  +D+  YN +IS LC++  L  A  L  +M E+   
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575

Query: 428 PDRYTY 433
           PD  TY
Sbjct: 576 PDELTY 581



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/442 (32%), Positives = 237/442 (53%), Gaps = 1/442 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +T NT+++ L   GK+++   L+  M + G  PN  TY  +++  CK G    AM +
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +     D   Y+++I+G C  G L+ AF L  EME      D++TYNTLI  F  
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +GR  +  KL+ ++ +  I PN VT +++I  + KEGK+ +A ++++ M + G +P+ +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LID  CK   +EEA +M+D+M  KG   + +T N +++  C   ++D+   L    S
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   + V+Y TL+ G+ +  K   A KL+ EM  R++ P   +Y  ++ GL  +G+ E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  ++ +S M  D   +  IIHG C+  +V+ A      +  K  K D    NI++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           S LCR+  L KA   FR    +G A D +TYN LI +   +     A  L+ EM+     
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610

Query: 428 PDRYTYAAIHTALVESGRLEEA 449
            D  T   +   L  SG L+++
Sbjct: 611 ADVSTVKMVINML-SSGELDKS 631



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 256/527 (48%), Gaps = 17/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G      T + +++   +  KL+     +  + K G  P+   +N L++G C    
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +VD M +    P + T N L+NG C  G + +A  L   M      P+ VTY  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   +SG++  A +L+ +++E  IK +AV ++I+I   CK+G +D A  +   ME  G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F  D +TYNTLI   C AG  ++  +++  M ++ +  N +T + ++ +   E KL EA 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +RG   + ++Y +LI G+ ++ +   A+++ D M  +   P   T+N +I G 
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + +  +++  E+   G+I +  T+NT++ GFC  G++E A +   +MV +  +PDI
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+  ILL GLC  G LEKAL+ F         +D   Y  +I  +C   +++DA+ L   
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +  K +  D   Y  + + L     L +A      M E G                   P
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA-----------------P 576

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++Y+  I  H        A ++ EE +  G   + ST   ++N L
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 179/308 (58%), Gaps = 2/308 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT++ ++D+  K+GKL E   LL +M ++G+ PN  TYN L+ G+CK   L+EA+++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           VDLM      PD+ T+N+LING+C A  +++   L +EM    ++ + VTYNTL+  F +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG+   A KL  E+    ++P+ V++ I++   C  G+++KA +I   +E++    D   
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  +I   C A  +++A+ +   +  KG+K++    N ++  LC +  L +A +L    +
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G+  DE++Y  LI  +  D+ A  A +L +EMK     P+  +   M+  +  SG+ +
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELD 629

Query: 308 QA-IDMLN 314
           ++ +DML+
Sbjct: 630 KSFLDMLS 637


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 162/537 (30%), Positives = 277/537 (51%), Gaps = 31/537 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+ T+L  L  + +++E  +L   M +    PN  T+  L++G C+ G + E
Sbjct: 143 LGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLI 122
           A+ ++D M ++   P   TY  +++G C  G    A  L ++ME +  ++P+VV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  +A  L  E+ E GI P+  T+N MI  +C  G+   A ++++ M E   S
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN LI+A  K G   EA  + D M  +G+  NTIT ++++   C + +LD A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   + +++ TLI GY   ++ +  ++L  EM E  ++  T TYN +I G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK----- 357
            G    A+D+L E++ SG+ PD  T +T++ G C  G+++ AL+   K+++KS K     
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKKDLDAS 501

Query: 358 -------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                  PD+ T NIL+SGL  EG   +A + +     +G   D++TY+++I  LCK+ R
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  +   M  K   P+  T+  +     ++GR+++  +   +  E G+         
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE---LFCEMGR--------- 609

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  I  ++I+Y   I      G    AL IF+E    G+  +  T  N++ GL
Sbjct: 610 -----RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/581 (28%), Positives = 281/581 (48%), Gaps = 67/581 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  ++  + +  + + V  L   M+++ +  +  ++NIL+  +C    L  A+ 
Sbjct: 76  LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALS 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+  L++G C    + EA  L  +M      P+VVT+ TL+N   
Sbjct: 136 TFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++P  +T+  ++   CK+G    A  ++R MEE +   P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID+ CK G   +A  +   M  KG+  +  T N+++   C   +  +A  LL  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V+Y  LI  + ++ K   A +L+DEM  R I+P+T TY++MI G  +  +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 306 TEQA-----------------------------------IDMLNELLQSGMIPDETTFNT 330
            + A                                   +++L+E+ ++G++ D TT+NT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGF   G +  AL    +M+     PDIVTC+ LL GLC  G L+ AL+ F+      
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D  TYN LIS L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 440 LVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           L +  RL+EA Q F S+                    +   P+ ++++  IN +C  GR 
Sbjct: 556 LCKQSRLDEATQMFDSM------------------GSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            D L++F E  ++GI  N  TY+ L+ G  ++  +I+ A+D
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF-RKVGNINGALD 637



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 239/457 (52%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  +TY TI+D + KKG      +LL  M++   ++PN   Y+ ++   CK G   +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +    PD++TYN +I G+C++G   +A +L +EM   K+ PDVVTYN LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T++ MI  +CK+ ++D A  +   M   G SP
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +T+NTLID  C A  +++   ++  M   GL  +T T NT++H       L+ A  LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q  + M 
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT   L++G C+ G ++  L+ F     +G   +++TY TLI    K   + 
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNIN 633

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T L     L+ A
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 257/515 (49%), Gaps = 21/515 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL-------MTQNKSLP 78
           L +  DL SDM +   +P+       V  +CKL  +   M   DL       M + +   
Sbjct: 60  LEDAIDLFSDMLRSRPLPS-------VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++N+LI  +C+   L  A     ++  L L PDVVT+ TL++      R  EA  L 
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++ E   +PN VT   ++   C+EG+I +A  ++  M E+G  P  +TY T++D  CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +  N +  + I+ +LC + +  +A  L     ++G + D  +
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y ++I G+    + + A +L  EM ER+I P   TYNA+I    + GK  +A ++ +E+L
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+IP+  T++++I GFC + +++ A      M  K   P+++T N L+ G C    ++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             ++        G   D+ TYNTLI        L  A  LL EM    L PD  T   + 
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G+L++A +   +M ++ K        + S     ++P   +Y+  I+   ++G+
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKK------DLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + +A +++EE   +GI  +  TY ++++GL K+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 11/355 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN +++A  K+GK  E  +L  +M  +G++PN  TY+ ++ G+CK   L  A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM      P++ T+N LI+G+C A  +++   L  EM    L+ D  TYNTLI+ F+ 
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G    A  L+ E+   G+ P+ VT + ++   C  GK+  A ++ + M++         
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 179 --NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             NG  PD  TYN LI      G   EA  + + M  +G+  +TIT ++++  LC + +L
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  + +S   + +  + V++ TLI GY +  + +  L+L+ EM  R I+ +  TY  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           I G  + G    A+D+  E++ SG+ PD  T   ++ G  S+ ++++A+    K+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 218/451 (48%), Gaps = 59/451 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V Y+ I+D+L K G+ ++ ++L ++M+++G+ P+  TYN ++ G+C  G   +A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-------- 118
           ++  M + K  PDV TYN LIN +   G   EA  L  EM    ++P+ +TY        
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 119 ---------------------------NTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                      NTLI+ +  + R  +  +L+ E+ E G+  +  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I  +   G ++ A  +++ M  +G  PD VT +TL+D  C  G +++A  M  VM
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            +                   +K LD ++         G   D  +Y  LI+G   + K 
Sbjct: 492 QKS------------------KKDLDASHPF------NGVEPDVQTYNILISGLINEGKF 527

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L++EM  R I+P T TY++MI GL +  + ++A  M + +      P+  TF T+
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G+C  G+V+  L+   +M  +    + +T   L+ G  + G +  AL  F+  I  G 
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             D++T   +++ L  +  L+ A  +L +++
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 176/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TY++++D   K+ +L+    +   M  +G  PN  T+N L+ GYC    + + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  MT+   + D  TYN LI+G+   G L  A  L +EM S  L PD+VT +TL++ 
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK++     +LD     +G++P+  T+NI+I     EGK  +A ++ 
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M D MG K    N +T  T+++  C  
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   + ++Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ GL    + ++A+ ML +L  S
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 21/319 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G    ++ L +  H +   K L++A  L +   +       V +  L+    R E+ +  
Sbjct: 42  GFGGESLKLQSGFHEI---KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M+ +QI    +++N +I       K   A+    ++ + G+ PD  TF T++HG
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C E +V +AL   ++M E + +P++VT   L++GLCREG + +A+      +  G    
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +TY T++  +CK+     A  LL +MEE   + P+   Y+AI  +L + GR  +AQ   
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + M E G                 I P   +Y+  I   CS GR+ DA Q+ +E  ++ I
Sbjct: 279 TEMQEKG-----------------IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 514 AINKSTYMNLMNGLIKRRK 532
           + +  TY  L+N  +K  K
Sbjct: 322 SPDVVTYNALINAFVKEGK 340


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 250/476 (52%), Gaps = 9/476 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D VTYN+++D     G+  EV  LL+ M ++ + P+  T+NIL+   CK G + EA
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+ +M++    PD+ TYN L+ G+C+   + EA  L   M    L PDV+ YN LI+ 
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++    EA  L  EL    + P   ++N +I   C  G+I    K++  M  +   PD
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LIDA CK G + EA  ++ +M +KG+K N +T N ++   C    ++ A  + N
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   D ++Y  LI GY + E  + A+ L+ EM+ + ++P   +YN++I GL   G
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +     ++L+E+  SG  PD  T+N ++  FC     +KA+    ++VE  + PD  T +
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNH 583

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++  LC+   L+ A    +  ++ G + +  TY  LI++LCK+    +A  LLS+ME+ 
Sbjct: 584 AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDN 643

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN--------HQVVQPNTS 472
              PD  T+  I   L++    ++A+K    M+  G +N        H V  P +S
Sbjct: 644 DRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNVFFPASS 699



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 248/503 (49%), Gaps = 17/503 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+  +++  F +        LL+ + K G  PN  T+N +++G+C  G + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     +     L D +TY  LING    G ++ A  L +EME   + P++V Y+ LI+ 
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A  L  ++ E GI  +AVT+N +I   C  G+  +  +++  M      PD
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LIDA CK G + EA  ++ +M ++G K + +T N ++   C  + + EA  L N
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              KRG   D ++Y  LI GY + +  + A+ L+ E+  + ++P+  +YN++I GL  SG
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +      +L+E+  S   PD  T+N +I   C EG++ +AL     M++K  KP+IVT N
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C    +  A   F   +  G   D + YN LI+  CK   +++A  L  EM  K
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD  +Y ++   L   GR+   Q+    M ++G+                  P  I+
Sbjct: 505 NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ-----------------SPDVIT 547

Query: 485 YSEKINEHCSQGRYKDALQIFEE 507
           Y+  ++  C    +  A+ +F +
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQ 570



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 234/496 (47%), Gaps = 30/496 (6%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           C+   + +A+   + M +    P    ++ L+      G    A  L  +++S  + P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            T+  LIN +F    +  AF L+  + + G +PN VT N +I  +C  G I KA    +N
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           +   G+  D  TY TLI+   K G ++ A  ++  M +  ++ N +  + ++  LC +  
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + +A  L +   +RG  LD V+Y +LI G     +     +L  +M    + P  +T+N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + G+  +A  +L  + + G  PD  T+N ++ G+CS   V +A +  N+MV++ 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +PD++  N+L+ G C+  ++++A+  F+    K       +YN+LI  LC   R+    
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL EM      PD  TY  +  AL + GR+ EA     +M++ G      V+PN     
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG------VKPNIVTYN 444

Query: 476 EEID------------------------PSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             +D                        P  ++Y+  IN +C      +A+ +F+E R K
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504

Query: 512 GIAINKSTYMNLMNGL 527
            +  + ++Y +L++GL
Sbjct: 505 NLIPDIASYNSLIDGL 520



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 193/418 (46%), Gaps = 17/418 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P    ++ L+      G    A  L  +L   GI P+  T  I+I  Y  +     A  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  + ++G+ P+ VT+NT+I+  C  G + +A      +  +G   +  T  T+++ L  
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++  A  LL    K     + V Y  LI G  +D   + AL L  ++ ER I+    T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN++I G    G+ ++   +L ++++  + PD+ TFN +I   C EG++ +A      M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++  KPDIVT N L+ G C    + +A + F   + +G   D + YN LI   CK + ++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  L  E+  K L P   +Y ++   L  SGR+   +K    M       H   QP   
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-------HGSAQP--- 402

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  P  ++Y+  I+  C +GR  +AL +     +KG+  N  TY  +M+G   R
Sbjct: 403 -------PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 17/337 (5%)

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           NC+  N+++A    + M R      T   + +L  +        A  L      +G    
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             ++  LI  YF       A  L   + +    P+  T+N +I G   +G   +A+D   
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            LL  G + D+ T+ T+I+G    GQ++ AL    +M + S +P++V  + L+ GLC++G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +  AL        +G  +D+VTYN+LI   C   R ++   LL++M  + + PD YT+ 
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +  AL + GR+ EAQ   ++M + G+                  P  ++Y+  +  +CS
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGE-----------------KPDIVTYNALMEGYCS 312

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +    +A ++F    ++G+  +   Y  L++G  K +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 61/130 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T + I+D L K  KL    D L  +   G  PN  TY IL++  CK G   EA
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M  N   PD  T+ ++I         ++A +LR+EM +  L+    + N   N 
Sbjct: 634 MLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNV 693

Query: 125 FFESGRSMEA 134
           FF +    ++
Sbjct: 694 FFPASSGFQS 703


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 151/445 (33%), Positives = 241/445 (54%), Gaps = 1/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT  T++  ++ +  + +   L  +M ++GL  +  TY IL++G CK      A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++ + M  N    DV+TY M+I+  C  GM  EA  +  EM    +LPDVV Y++L++ 
Sbjct: 132 IKLHEKMKGNCK-GDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA +   E++  GI  +  T+N +I    + G   +    +  M + GFSPD
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+  LID  CK G + EA +++++M  KG + + +T NT+++ LC   +L++A  L  
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S + RG  L+  SY  LI GY +D+K + A +L++EM+ + + PST TYN +I  L QSG
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A  +  E+   G     +T+  ++ G C  G +E+A+     + +   KP+I   +
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ILL G+CR G LE+A K F      G   D++ YN LI+ LC +  L +A  LL +MEEK
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
              PD  T+  I   L++   + EA
Sbjct: 491 GCLPDSITFNVIIQNLLKENEIHEA 515



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 195/367 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G LPD V Y++++D L + G+L E  +   +M+ +G+  +  TYN L+ G  + G 
Sbjct: 172 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KE    ++LM      PD +T+ +LI+G C  G + EA ++ + M      PD++TYNT
Sbjct: 232 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNT 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N     G+  +A KL + L + GIK N  ++NI+I  YCK+ KID+A ++   M   G
Sbjct: 292 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYNTLI A C++G +  A ++   M   G  +   T   +L  LC    L+EA 
Sbjct: 352 LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAI 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  K  +  +   +  L+ G  R  K   A K +DE+ +  + P T  YN +I GL
Sbjct: 412 DLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 471

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G   +A+ +L ++ + G +PD  TFN II     E ++ +A+Q   +M  ++F PD 
Sbjct: 472 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDE 531

Query: 361 VTCNILL 367
              ++LL
Sbjct: 532 AVTSMLL 538



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 204/378 (53%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D  TY  I+D+L K G   E  D+ S+M   G++P+   Y+ L+ G C+ G LKEA+
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 201

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                M       DV+TYN LI+G   AG+ +E       M      PD  T+  LI+  
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G+  EA ++++ +   G +P+ +T+N ++   C  G+++ A K+  ++ + G   + 
Sbjct: 262 CKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 321

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            +YN LI+  CK   ++EAFR+ + M  KGLK +T+T NT++  LC   ++  A  L   
Sbjct: 322 FSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G +L   +Y  L+ G  ++     A+ L+  +K+ +  P+   ++ ++ G+ ++GK
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A    +E+ ++G+ PD   +N +I+G C++G + +A++   +M EK   PD +T N+
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501

Query: 366 LLSGLCREGILEKALKFF 383
           ++  L +E  + +A++  
Sbjct: 502 IIQNLLKENEIHEAIQLL 519



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 197/406 (48%), Gaps = 19/406 (4%)

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           + G +P+AVT   ++K    E  I  A ++   M E G   D  TY  LI+  CKA    
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A ++ + M +   K +  T   I+ +LC +    EA  + +     G   D V Y +L+
Sbjct: 130 LAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G  R  +   AL+ + EM+ R I    +TYN++I GLS++G  ++    LN ++  G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  TF  +I G C EG+V +A Q    M  K  +PDI+T N L++GLC  G LE A K 
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F S   +G  ++  +YN LI+  CK++++++AF L  EM  K L P   TY  +  AL +
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 443 SGRLEEAQKFTSIMVETGKI----------------NH--QVVQPNTSKTPEEIDPSSIS 484
           SGR+  AQK    M   G+                  H  + +    S    E  P+   
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +S  ++  C  G+ ++A + F+E  + G+  +   Y  L+NGL  +
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 474



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 205/436 (47%), Gaps = 21/436 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD VT  TL+   +      +A +L DE+ E G+  +A T+ I+I   CK  K   A K+
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              M+ N    D  TY  +ID+ CK G   EA  M   M   G+  + +  ++++  LC 
Sbjct: 135 HEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +L EA         RG   D  +Y +LI G  R           + M +R   P  FT
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           +  +I GL + GK  +A  +L  +   G  PD  T+NT+++G C  GQ+E A +    + 
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++  K ++ + NIL++G C++  +++A + F     KG    +VTYNTLI +LC+  R+ 
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSI---------------- 455
            A  L  EM+         TY  +   L ++G LEEA   F SI                
Sbjct: 374 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433

Query: 456 --MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M   GK+     Q +   +   ++P +I+Y+  IN  C++G   +A+++  +  +KG 
Sbjct: 434 DGMCRAGKLEEAWKQFD-EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 492

Query: 514 AINKSTYMNLMNGLIK 529
             +  T+  ++  L+K
Sbjct: 493 LPDSITFNVIIQNLLK 508



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 174/317 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+  ++D L K+GK+ E + +L  M  +G  P+  TYN L++G C +G L++A
Sbjct: 246 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ + +       +V++YN+LING+C    ++EAFRL +EM    L P  VTYNTLI  
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGA 365

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SGR   A KL  E+   G      T+ +++   CK G +++A  + +++++    P+
Sbjct: 366 LCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPN 425

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              ++ L+D  C+AG +EEA++  D + + GL+ +TI  N +++ LC +  L EA  LL 
Sbjct: 426 IEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLW 485

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   D +++  +I    ++ + + A++L +EM+ R   P     + ++   S   
Sbjct: 486 QMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDP 545

Query: 305 KTEQAIDMLNELLQSGM 321
           +   A+  L   LQ G+
Sbjct: 546 QWHAALVSLPNALQKGV 562



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 147/285 (51%), Gaps = 18/285 (6%)

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KRG+  D V+  TL+ G + +     A++L+DEM E+ +     TY  +I GL ++ KT 
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            AI  L+E ++     D  T+  II   C +G   +AL   ++M+     PD+V  + L+
Sbjct: 130 LAIK-LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCR G L++AL+FF+    +G + D  TYN+LI  L +    ++    L+ M ++   
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD +T+  +   L + G++ EAQ+   +M   GK                 +P  ++Y+ 
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK-----------------EPDILTYNT 291

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +N  C  G+ +DA ++FE    +GI +N  +Y  L+NG  K +K
Sbjct: 292 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 336


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 162/531 (30%), Positives = 265/531 (49%), Gaps = 19/531 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E FGC P   +YN++L+AL +  K +E        +  GL PN  TYNIL+   C+    
Sbjct: 81  EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 140

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +++ M      PDV++Y  LIN     G + +A +L  EM    + PDV  YN L
Sbjct: 141 DKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 200

Query: 122 INRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I+ FF+ G  + A ++ +  L    + PN  ++N+MI   CK GK D++ +I   M++N 
Sbjct: 201 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 260

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D  TY+TLI   C +GN++ A R+   M   G+  + +  NT+L+      +++E  
Sbjct: 261 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 320

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     K G     VSY  LI G F + K + A+ +W+ + E+     + TY  ++ GL
Sbjct: 321 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 379

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A+ +L E        D   ++++I+G C EG++++     ++M +   KP+ 
Sbjct: 380 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             CN +++G  R   LE AL+FF + + KG     VTYNTLI+ L K  R  +A+ L+ E
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 499

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +K   P+  TY+ +   L +  +L+ A       +E G                   P
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-----------------FKP 542

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
               ++  I+  CS G+ +DALQ++ E +Q+    N  T+  LM G  K R
Sbjct: 543 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVR 593



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 239/457 (52%), Gaps = 2/457 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G  PD   YN ++D  FKKG +    ++   + K   + PN  +YN++++G CK G   E
Sbjct: 189 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 248

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  +   M +N+   D++TY+ LI+G C +G L+ A R+ KEM    + PDVV YNT++N
Sbjct: 249 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 308

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +  +GR  E  +L   +++ G +   V++NI+I+   +  K+D+A  I   + E     
Sbjct: 309 GYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 367

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY  L+   CK G + +A  +++        ++T   +++++ LC E +LDE   +L
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  +K G   +      +I G+ R  K   AL+ +  M  +   P+  TYN +I GLS++
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 487

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            +  +A  ++ E+LQ G  P+  T++ +++G C   +++ AL    + +EK FKPD+   
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 547

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ GLC  G +E AL+ +     +    + VT+NTL+    K R  E A  +   + +
Sbjct: 548 NIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 607

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             L PD  +Y      L    R+ +A  F +  V+ G
Sbjct: 608 YGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 268/529 (50%), Gaps = 19/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  +Y T++++L K G +++   L  +M ++G+ P+   YNIL+ G+ K G 
Sbjct: 150 MWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 209

Query: 61  LKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +  A  + + + +  S+ P++ +YN++ING C  G  +E+F +   M+  +   D+ TY+
Sbjct: 210 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 269

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+    SG    A ++  E+ E+G+ P+ V +N M+  Y + G+I++  ++ + ME+ 
Sbjct: 270 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 329

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G     V+YN LI    +   ++EA  + +++  K    +++T   ++H LC    L++A
Sbjct: 330 G-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 388

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L  A      LD  +Y ++I G  R+ + +    + D+M +    P+ +  NA+I G
Sbjct: 389 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVING 448

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             ++ K E A+     ++  G  P   T+NT+I+G     +  +A     +M++K +KP+
Sbjct: 449 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPN 508

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           ++T ++L++GLC+   L+ AL  +   + KG   D   +N +I  LC   ++EDA  L S
Sbjct: 509 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 568

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM+++   P+  T+  +     +    E A K    +++ G                 + 
Sbjct: 569 EMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG-----------------LQ 611

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           P  ISY+  +   CS  R  DA+    +   +G+     T+  L+ G +
Sbjct: 612 PDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL 660



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 200/377 (53%), Gaps = 2/377 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V YNT+L+   + G++ E  +L   M+K+G      +YNIL+ G  +   + EA
Sbjct: 295 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEA 353

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +L+ +     D  TY +L++G C  G L +A  + +E E+ +   D   Y+++IN 
Sbjct: 354 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 413

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  E   ++D++ +HG KPN    N +I  + +  K++ A +   NM   G  P 
Sbjct: 414 LCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 473

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI+   KA    EA+ ++  M +KG K N IT + +++ LC  KKLD A  L  
Sbjct: 474 VVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 533

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A ++G+  D   +  +I G     K   AL+L+ EMK+R  +P+  T+N ++ G  +  
Sbjct: 534 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVR 593

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  + + +LQ G+ PD  ++N  + G CS  ++  A+ F N  V++   P  +T N
Sbjct: 594 DFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWN 653

Query: 365 ILLSG-LCREGILEKAL 380
           IL+ G L  +G +E   
Sbjct: 654 ILVQGYLALKGYMEPVF 670



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 225/484 (46%), Gaps = 53/484 (10%)

Query: 85  MLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           ++ + +    M ++A  + + M E     P + +YN+L+N   ES +  EA       + 
Sbjct: 58  LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ PN  T+NI+IK  C++ + DKA +++  M   GFSPD  +Y TLI++  K G M +
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK-RGYYLDEVSYGTLI 262
           A ++ D M  +G+  +    N ++     +  +  A  +     K    Y +  SY  +I
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G  +  K + + ++W  MK+ +     +TY+ +I GL  SG  + A  +  E+ ++G+ 
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297

Query: 323 PDETTFNTIIHGFCSEGQVEKALQ-----------------------FHNKMV------- 352
           PD   +NT+++G+   G++E+ L+                       F N  V       
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIW 357

Query: 353 ----EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
               EK    D +T  +L+ GLC+ G L KAL            +D+  Y+++I+ LC+E
Sbjct: 358 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 417

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            RL++  G+L +M +    P+ Y   A+    V + +LE+A +F   MV  G        
Sbjct: 418 GRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCF------ 471

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P+ ++Y+  IN      R+ +A  + +E  QKG   N  TY  LMNGL 
Sbjct: 472 -----------PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC 520

Query: 529 KRRK 532
           + +K
Sbjct: 521 QGKK 524



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  PD ++YN  L  L    ++++    L+D   +G++P   T+NILV GY  L    E
Sbjct: 608 YGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYME 667

Query: 64  AMRVVDLMTQNKSL 77
            + V   M  N  +
Sbjct: 668 PVFVPASMKGNPGM 681


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 269/525 (51%), Gaps = 21/525 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +N +L A+ K  K + V  L   M+   +  +  +YNIL++ +C+   L  A+ 
Sbjct: 61  LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 120

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD+ T + L+NG+C+   + EA  L  +M  ++  P+ VT+NTLI+  F
Sbjct: 121 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 180

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  LID +   G +P+  T+  ++   CK G ID A  +++ ME+     D V
Sbjct: 181 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 240

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y T+IDA C   N+ +A  +   M  KG++ N +T N+++  LC   +  +A  LL+  
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 300

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++  LI  + ++ K   A KL+DEM +R I P  FTY+++I G     + 
Sbjct: 301 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 360

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     P+  T+NT+I GFC   +VE+ ++   +M ++    + VT N L
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 420

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL + G  + A K F+  +  G   D +TY+ L+  LCK  +LE A  +   +++ K+
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD YTY  +   + ++G++E+       +   G      V+PN            I Y+
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG------VKPNV-----------IIYT 523

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I+  C +G  ++A  +F E ++ G   N  TY    N LI+ R
Sbjct: 524 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTY----NTLIRAR 564



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 237/444 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT +++L+      +++E   L+  M      PN  T+N L+ G      
Sbjct: 125 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ ++D M      PD++TY  ++NG C  G ++ A  L K+ME  K+  DVV Y T
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+         +A  L  E+D  GI+PN VT+N +I+  C  G+   A +++ +M E  
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT++ LIDA  K G + EA ++ D M ++ +  +  T +++++  C   +LDEA 
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + + V+Y TLI G+ + ++    ++L+ EM +R ++ +T TYN +I GL
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G  + A  +  +++  G+ PD  T++ ++ G C  G++EKAL     + +   +PDI
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F S  LKG   + + Y T+IS  C++   E+A  L  E
Sbjct: 485 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 544

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    P+  TY  +  A +  G
Sbjct: 545 MKEDGTLPNSGTYNTLIRARLRDG 568



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 233/442 (52%), Gaps = 1/442 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+NT++  LF   K +E   L+  M  +G  P+  TY  +V+G CK G +  A+ +
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 226

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K   DV  Y  +I+  CN   + +A  L  EM++  + P+VVTYN+LI     
Sbjct: 227 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 286

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A +L+ ++ E  I PN VT + +I  + KEGK+ +A K+   M +    PD  T
Sbjct: 287 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 346

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++LI+  C    ++EA  M ++M  K    N +T NT++   C  K+++E   L    S
Sbjct: 347 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RG   + V+Y TLI G F+    + A K++ +M    + P   TY+ ++ GL + GK E
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +   L +S M PD  T+N +I G C  G+VE        +  K  KP+++    ++
Sbjct: 467 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SG CR+G+ E+A   FR     G   +S TYNTLI +  ++     +  L+ EM      
Sbjct: 527 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586

Query: 428 PDRYTYAAIHTALVESGRLEEA 449
            D  T + +   ++  GRLE++
Sbjct: 587 GDASTISMV-INMLHDGRLEKS 607



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M Q++ LP +  +N L++        +    L + M++L++  D+ +YN 
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  ++ ++ + G +P+ VT + ++  YC   +I +A  +V  M    
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ VT+NTLI          EA  ++D M  +G + +  T  T+++ LC    +D A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    K     D V Y T+I      +  N AL L+ EM  + I P+  TYN++I  L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + P+  TF+ +I  F  EG++ +A + +++M+++S  PDI
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T + L++G C    L++A   F   I K    + VTYNTLI   CK +R+E+   L  E
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L  +  TY  +   L ++G  + AQK    MV  G                 + P
Sbjct: 405 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-----------------VPP 447

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I+YS  ++  C  G+ + AL +FE  ++  +  +  TY  ++ G+ K  K
Sbjct: 448 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 210/415 (50%), Gaps = 1/415 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TY T+++ L K+G ++    LL  M+K  +  +   Y  ++   C    
Sbjct: 195 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 254

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M      P+V TYN LI   CN G   +A RL  +M   K+ P+VVT++ 
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 314

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ +EA KL DE+ +  I P+  T++ +I  +C   ++D+A  +   M    
Sbjct: 315 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 374

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYNTLI   CKA  +EE   +   M ++GL  NT+T NT++  L      D A 
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G   D ++Y  L+ G  +  K  +AL +++ +++ ++ P  +TYN MI G+
Sbjct: 435 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK E   D+   L   G+ P+   + T+I GFC +G  E+A     +M E    P+ 
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 554

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T N L+    R+G    + +  +     G   D+ T + +I+ L  + RLE ++
Sbjct: 555 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 608



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 173/368 (47%), Gaps = 17/368 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D A  +   M ++   P  V +N L+ A  K    +    + + M    +  +  + N
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C   +L  A  +L    K GY  D V+  +L+ GY   ++ + A+ L D+M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +  P+T T+N +I GL    K  +A+ +++ ++  G  PD  T+ T+++G C  G ++ A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L    KM +   + D+V    ++  LC    +  AL  F     KG   + VTYN+LI  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M E+K+ P+  T++A+  A V+ G+L EA+K    M++      
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 337

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP   +YS  IN  C   R  +A  +FE    K    N  TY  L+
Sbjct: 338 -----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386

Query: 525 NGLIKRRK 532
            G  K ++
Sbjct: 387 KGFCKAKR 394



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 141/311 (45%), Gaps = 25/311 (8%)

Query: 247 SKRGYYLDEVSYG---TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           S RG Y    SY     L      D K + A+ L+ EM + + +PS   +N ++  +++ 
Sbjct: 18  SLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM 77

Query: 304 GKTEQAIDMLNELLQSGMIP-DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            K +  I  L E +Q+  I  D  ++N +I+ FC   Q+  AL    KM++  ++PDIVT
Sbjct: 78  NKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 136

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + LL+G C    + +A+       +     ++VT+NTLI  L    +  +A  L+  M 
Sbjct: 137 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 196

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----------- 471
            +   PD +TY  +   L + G ++ A      M E GKI   VV   T           
Sbjct: 197 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNV 255

Query: 472 --------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                       + I P+ ++Y+  I   C+ GR+ DA ++  +  ++ I  N  T+  L
Sbjct: 256 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 315

Query: 524 MNGLIKRRKSI 534
           ++  +K  K +
Sbjct: 316 IDAFVKEGKLV 326


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 248/465 (53%), Gaps = 3/465 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G +PD  T+ TI+    ++G L+    +   M + G   +  + N++V G+CK G 
Sbjct: 215 MPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274

Query: 61  LKEAMRVVDLMT-QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +++A+  +  M+ Q+   PD +T+N L+NG C AG ++ A  +   M      PDV TYN
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++I+   + G   EA + +D++      PN VT+N +I   CKE ++++A ++ R +   
Sbjct: 335 SVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  T+N+LI   C   N   A  + + M  KG + +  T N ++ +LC + KLDEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L      G     ++Y TLI G+ +  K   A +++DEM+   +  ++ TYN +I G
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDG 514

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +S + E A  ++++++  G  PD+ T+N+++  FC  G ++KA      M     +PD
Sbjct: 515 LCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           IVT   L+SGLC+ G +E A K  RS  +KG A+    YN +I  L ++R+  +A  L  
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFR 634

Query: 420 EM-EEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           EM E+ +  PD  +Y  +   L    G + EA  F   ++E G +
Sbjct: 635 EMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 270/549 (49%), Gaps = 21/549 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  PD   YN +L+ L     L  V    + M   G+ P+ +T+N+L+   C+   
Sbjct: 145 IDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A+ +++ M     +PD  T+  ++ G+   G L+ A R+R++M         V+ N 
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264

Query: 121 LINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +++ F + GR  +A   I E+ ++ G  P+  T N ++   CK G +  A +I+  M + 
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G+ PD  TYN++I   CK G ++EA   +D M  +    NT+T NT++ TLC E +++EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L    + +G   D  ++ +LI G         A++L++EM+ +   P  FTYN +I  
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L   GK ++A++ML ++  SG      T+NT+I GFC   ++ +A +  ++M       +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRN 504

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+ GLC+   +E A +     I++G+  D  TYN+L++  C+   ++ A  ++ 
Sbjct: 505 SVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT-SIMVETGKINHQVVQP------NTS 472
            M      PD  TY  + + L ++GR+E A K   SI ++   +      P         
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKR 624

Query: 473 KTPEEID------------PSSISYSEKINEHCS-QGRYKDALQIFEETRQKGIAINKST 519
           KT E I+            P ++SY       C+  G  ++A+    E  +KG     S+
Sbjct: 625 KTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSS 684

Query: 520 YMNLMNGLI 528
              L  GL+
Sbjct: 685 LYMLAEGLL 693



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 262/549 (47%), Gaps = 26/549 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+   Y  IL  L + G  +++R +L DMK  G     + + IL+  Y +     E + V
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 68  VDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V  M  +  L PD   YN ++N   +   L+       +M    + PDV T+N LI    
Sbjct: 141 VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            + +   A  +++++  +G+ P+  T   +++ Y +EG +D A +I   M E G S   V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           + N ++   CK G +E+A   +  M  + G   +  T NT+++ LC    +  A  +++ 
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + GY  D  +Y ++I+G  +  +   A++  D+M  R   P+T TYN +I  L +  +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A ++   L   G++PD  TFN++I G C       A++   +M  K  +PD  T N+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+  LC +G L++AL   +   L G A   +TYNTLI   CK  ++ +A  +  EME   
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----------INH----------- 464
           +  +  TY  +   L +S R+E+A +    M+  G+          + H           
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAA 560

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            +VQ  TS   E   P  ++Y   I+  C  GR + A ++    + KGIA+    Y  ++
Sbjct: 561 DIVQAMTSNGCE---PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVI 617

Query: 525 NGLIKRRKS 533
            GL ++RK+
Sbjct: 618 QGLFRKRKT 626



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 229/451 (50%), Gaps = 39/451 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+NT+++ L K G +    +++  M ++G  P+  TYN ++SG CKLG +KEA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +  +D M      P+  TYN LI+  C    +EEA  L + + S  +LPDV T+N+LI  
Sbjct: 350 VEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +     A +L +E+   G +P+  T+N++I   C +GK+D+A  +++ ME +G +  
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTLID  CKA  + EA  + D M   G+  N++T NT++  LC  +++++A  L++
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529

Query: 245 -----------------------------------SASKRGYYLDEVSYGTLITGYFRDE 269
                                              + +  G   D V+YGTLI+G  +  
Sbjct: 530 QMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTF 328
           +   A KL   ++ + I  +   YN +I GL +  KT +AI++  E+L Q+   PD  ++
Sbjct: 590 RVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSY 649

Query: 329 NTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
             +  G C+ G  + +A+ F  +++EK F P+  +  +L  GL    + E  +K     +
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            K +  +     +++  L K R+ +DA   L
Sbjct: 710 QKARFSEEEV--SMVKGLLKIRKFQDALATL 738


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 162/531 (30%), Positives = 265/531 (49%), Gaps = 19/531 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E FGC P   +YN++L+AL +  K +E        +  GL PN  TYNIL+   C+    
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +++ M +    PDV++Y  LIN     G + +A +L  EM    + PDV  YN L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225

Query: 122 INRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I+ FF+ G  + A ++ + L     + PN  ++N+MI   CK GK D++ +I   M++N 
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D  TY+TLI   C +GN++ A R+   M   G+  + +  NT+L+      +++E  
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     K G     VSY  LI G F + K + A+ +W+ + E+     + TY  ++ GL
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A+ +L E        D   ++++I+G C EG++++     ++M +   KP+ 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             CN +++G  R   LE AL+FF + + KG     VTYNTLI+ L K  R  +A+ L+ E
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K   P+  TY+ +   L +  +L+ A       +E G                   P
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-----------------FKP 567

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
               ++  I+  CS G+ +DALQ++ E +Q+    N  T+  LM G  K R
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 220/411 (53%), Gaps = 2/411 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G  PD   YN ++D  FKKG +    ++   + K   + PN  +YN++++G CK G   E
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  +   M +N+   D++TY+ LI+G C +G L+ A R+ KEM    + PDVV YNT++N
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +  +GR  E  +L   +++ G +   V++NI+I+   +  K+D+A  I   + E     
Sbjct: 334 GYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY  L+   CK G + +A  +++        ++T   +++++ LC E +LDE   +L
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  +K G   +      +I G+ R  K   AL+ +  M  +   P+  TYN +I GLS++
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            +  +A  ++ E+L  G  P+  T++ +++G C   +++ AL    + +EK FKPD+   
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           NI++ GLC  G +E AL+ +     +    + VT+NTL+    K R  E A
Sbjct: 573 NIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 234/504 (46%), Gaps = 55/504 (10%)

Query: 66  RVVDLM-TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLIN 123
           R+V+L+ TQ    P+      +I  +    M ++A  + + M E     P + +YN+L+N
Sbjct: 64  RIVELIRTQKCKCPEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 122

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ES +  EA       +  G+ PN  T+NI+IK  C++ + DKA +++  M E GFSP
Sbjct: 123 ALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSP 182

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  +Y TLI++  K G M +A ++ D M  +G+  +    N ++     +  +  A  + 
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242

Query: 244 NSASK-RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               K    Y +  SY  +I G  +  K + + ++W  MK+ +     +TY+ +I GL  
Sbjct: 243 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ---------------- 346
           SG  + A  +  E+ ++G+ PD   +NT+++G+   G++E+ L+                
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 347 -------FHNKMV-----------EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
                  F N  V           EK    D +T  +L+ GLC+ G L KAL        
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
               +D+  Y+++I+ LC+E RL++  G+L +M +    P+ +   A+    V + +LE+
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A +F   MV  G                   P+ ++Y+  IN      R+ +A  + +E 
Sbjct: 483 ALRFFGNMVSKGCF-----------------PTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             KG   N  TY  LMNGL + +K
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKK 549



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 168/315 (53%), Gaps = 1/315 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V YNT+L+   + G++ E  +L   M+K+G      +YNIL+ G  +   + EA
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEA 378

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +L+ +     D  TY +L++G C  G L +A  + +E E+ +   D   Y+++IN 
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 438

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  E   ++D++ +HG KPN    N +I  + +  K++ A +   NM   G  P 
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI+   KA    EA+ ++  M  KG K N IT + +++ LC  KKLD A  L  
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 558

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A ++G+  D   +  +I G     K   AL+L+ EMK+R+ +P+  T+N ++ G  +  
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618

Query: 305 KTEQAIDMLNELLQS 319
             E+A  + + +LQS
Sbjct: 619 DFERASKIWDHILQS 633



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 89/185 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+    N +++   +  KL +      +M  +G  P   TYN L++G  K   
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  +V  M      P++ TY++L+NG C    L+ A  L  +       PDV  +N 
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 574

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+    SG+  +A +L  E+ +    PN VTHN +++ + K    ++A KI  ++ ++ 
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSW 634

Query: 181 FSPDC 185
            S +C
Sbjct: 635 SSSNC 639


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 162/531 (30%), Positives = 265/531 (49%), Gaps = 19/531 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E FGC P   +YN++L+AL +  K +E        +  GL PN  TYNIL+   C+    
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +++ M +    PDV++Y  LIN     G + +A +L  EM    + PDV  YN L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225

Query: 122 INRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I+ FF+ G  + A ++ +  L    + PN  ++N+MI   CK GK D++ +I   M++N 
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D  TY+TLI   C +GN++ A R+   M   G+  + +  NT+L+      +++E  
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     K G     VSY  LI G F + K + A+ +W+ + E+     + TY  ++ GL
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A+ +L E        D   ++++I+G C EG++++     ++M +   KP+ 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             CN +++G  R   LE AL+FF + + KG     VTYNTLI+ L K  R  +A+ L+ E
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K   P+  TY+ +   L +  +L+ A       +E G                   P
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-----------------FKP 567

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
               ++  I+  CS G+ +DALQ++ E +Q+    N  T+  LM G  K R
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 239/477 (50%), Gaps = 35/477 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G  PD   YN ++D  FKKG +    ++   + K   + PN  +YN++++G CK G   E
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  +   M +N+   D++TY+ LI+G C +G L+ A R+ KEM    + PDVV YNT++N
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIK----------------------------------PN 149
            +  +GR  E  +L   +++ G +                                   +
Sbjct: 334 GYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 393

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           ++T+ +++   CK G ++KA  I+   E      D   Y+++I+  C+ G ++E   ++D
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M + G K N    N +++      KL++A     +   +G +   V+Y TLI G  + E
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           + + A  L  EM  +   P+  TY+ ++ GL Q  K + A+++  + L+ G  PD    N
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            IIHG CS G+VE ALQ +++M ++   P++VT N L+ G  +    E+A K +   +  
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQY 633

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           G   D ++YN  +  LC   R+ DA G L++  ++ + P   T+  +  A++++G L
Sbjct: 634 GPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 234/504 (46%), Gaps = 55/504 (10%)

Query: 66  RVVDLM-TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLIN 123
           R+V+L+ TQ    P+      +I  +    M ++A  + + M E     P + +YN+L+N
Sbjct: 64  RIVELIRTQKCKCPEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 122

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ES +  EA       +  G+ PN  T+NI+IK  C++ + DKA +++  M E GFSP
Sbjct: 123 ALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSP 182

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  +Y TLI++  K G M +A ++ D M  +G+  +    N ++     +  +  A  + 
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242

Query: 244 NSASK-RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               K    Y +  SY  +I G  +  K + + ++W  MK+ +     +TY+ +I GL  
Sbjct: 243 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ---------------- 346
           SG  + A  +  E+ ++G+ PD   +NT+++G+   G++E+ L+                
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 347 -------FHNKMV-----------EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
                  F N  V           EK    D +T  +L+ GLC+ G L KAL        
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
               +D+  Y+++I+ LC+E RL++  G+L +M +    P+ +   A+    V + +LE+
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A +F   MV  G                   P+ ++Y+  IN      R+ +A  + +E 
Sbjct: 483 ALRFFGNMVSKGCF-----------------PTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             KG   N  TY  LMNGL + +K
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKK 549


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 238/457 (52%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  +TY TI+D + KKG      +LL  M++   ++PN   Y+ ++   CK G   +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +    PD++TYN +I G+C++G   +A +L +EM   K+ PDVVTYN LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T+N MI  +CK+ ++D A  +   M   G SP
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T+ TLID  C A  +++   ++  M R+GL  NT+T NT++H  C    L+ A  L 
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 454 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLT 513

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q    M 
Sbjct: 514 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 573

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT N L++G C+ G ++  L+ F     +G   D++ Y TLI    K   + 
Sbjct: 574 SKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 633

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T       LE A
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 670



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 266/536 (49%), Gaps = 29/536 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+ T+L  L  + +++E  D    M +    PN  T+  L++G C+ G + E
Sbjct: 143 LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVE 202

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLI 122
           A+ ++D M ++   P   TY  +++G C  G    A  L ++ME +  ++P+VV Y+ +I
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  +A  L  E+ E GI P+  T+N MI  +C  G+   A ++++ M E   S
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN LI+A  K G   EA  + D M  +G+  NTIT N+++   C + +LD A  +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   D  ++ TLI GY   ++ +  ++L  EM  R ++ +T TYN +I G   
Sbjct: 383 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-------- 354
            G    A+D+  +++ SG+ PD  T NT++ G C  G+++ AL+    M +         
Sbjct: 443 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 502

Query: 355 ---SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                +PD++T NIL+ GL  EG   +A + +     +G   D++TY+++I  LCK+ RL
Sbjct: 503 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           ++A  +   M  K   P+  T+  +     ++GR+++  +    M   G +   ++    
Sbjct: 563 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII---- 618

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                        Y   I      G    AL IF+E    G+  +  T  N++ G 
Sbjct: 619 -------------YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 661



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 167/580 (28%), Positives = 277/580 (47%), Gaps = 65/580 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  ++  + +  + + V  L   M+++ +  +  ++NIL+  +C    L  A+ 
Sbjct: 76  LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALS 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+  L++G C    + EA     +M      P+VVT+ TL+N   
Sbjct: 136 TFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++P  +T+  ++   CK+G    A  ++R MEE +   P+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID+ CK G   +A  +   M  KG+  +  T N+++   C   +  +A  LL  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V+Y  LI  + ++ K   A +L+DEM  R I+P+T TYN+MI G  +  +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 306 TEQAIDM-----------------------------------LNELLQSGMIPDETTFNT 330
            + A DM                                   L+E+ + G++ +  T+NT
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGFC  G +  AL    +M+     PDIVTCN LL GLC  G L+ AL+ F+      
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D +TYN LI  L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L +  RL+EA   T + V  G               +   P+ ++++  IN +C  GR  
Sbjct: 556 LCKQSRLDEA---TQMFVSMGS--------------KSFSPNVVTFNTLINGYCKAGRVD 598

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           D L++F E  ++GI  +   Y+ L+ G  ++  +I+ A+D
Sbjct: 599 DGLELFCEMGRRGIVADAIIYITLIYGF-RKVGNINGALD 637



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 255/515 (49%), Gaps = 21/515 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL-------MTQNKSLP 78
           L +  DL SDM +   +P+       V  +CKL  +   M   DL       M + +   
Sbjct: 60  LEDAIDLFSDMLRSRPLPS-------VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++N+LI  +C+   L  A     ++  L L PDVVT+ TL++      R  EA    
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++ E   +PN VT   ++   C+EG+I +A  ++  M E+G  P  +TY T++D  CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +  N +  + I+ +LC + +  +A  L     ++G + D  +
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y ++I G+    + + A +L  EM ER+I P   TYNA+I    + GK  +A ++ +E+L
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+IP+  T+N++I GFC + +++ A      M  K   PD+ T   L+ G C    ++
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             ++       +G   ++VTYNTLI   C    L  A  L  +M    + PD  T   + 
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G+L++A +    M +  K++     P        ++P  ++Y+  I    ++G+
Sbjct: 473 DGLCDNGKLKDALEMFKAM-QKSKMDLDASHPFNG-----VEPDVLTYNILICGLINEGK 526

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + +A +++EE   +GI  +  TY ++++GL K+ +
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 215/451 (47%), Gaps = 59/451 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V Y+ I+D+L K G+ ++ ++L ++M+++G+ P+  TYN ++ G+C  G   +A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M + K  PDV TYN LIN +   G   EA  L  EM    ++P+ +TYN++I+ F 
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 371

Query: 127 ESGR----------------SMEAF-------------------KLIDELDEHGIKPNAV 151
           +  R                S + F                   +L+ E+   G+  N V
Sbjct: 372 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 431

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I  +C  G ++ A  + + M  +G  PD VT NTL+D  C  G +++A  M   M
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            +  + ++                         S    G   D ++Y  LI G   + K 
Sbjct: 492 QKSKMDLDA------------------------SHPFNGVEPDVLTYNILICGLINEGKF 527

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L++EM  R I+P T TY++MI GL +  + ++A  M   +      P+  TFNT+
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 587

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G+C  G+V+  L+   +M  +    D +    L+ G  + G +  AL  F+  I  G 
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 647

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             D++T   +++    +  LE A  +L +++
Sbjct: 648 YPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TYN+++D   K+ +L+   D+   M  +G  P+  T+  L+ GYC    + + 
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M +   + +  TYN LI+G+C  G L  A  L ++M S  + PD+VT NTL++ 
Sbjct: 415 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 474

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK +     +LD     +G++P+ +T+NI+I     EGK  +A ++ 
Sbjct: 475 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 534

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M   MG K    N +T NT+++  C  
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 594

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   D + Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ G     + E+A+ ML +L  S
Sbjct: 655 RNMLTGFWSKEELERAVAMLEDLQMS 680



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 156/324 (48%), Gaps = 21/324 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G    ++ L +  H +   K L++A  L +   +       V +  L+    R E+ +  
Sbjct: 42  GFGGESLKLQSGFHEI---KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M+ +QI    +++N +I       K   A+    ++ + G+ PD  TF T++HG
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C E +V +AL F ++M E + +P++VT   L++GLCREG + +A+      +  G    
Sbjct: 159 LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +TY T++  +CK+     A  LL +MEE   + P+   Y+AI  +L + GR  +AQ   
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLF 278

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + M E G                 I P   +Y+  I   CS GR+ DA Q+ +E  ++ I
Sbjct: 279 TEMQEKG-----------------IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 514 AINKSTYMNLMNGLIKRRKSISKA 537
           + +  TY  L+N  +K  K    A
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAA 345


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 272/525 (51%), Gaps = 21/525 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  + ++ +L A+ K  K + V  L   M+  G+  N  TY+IL++ +C+   L  A+ 
Sbjct: 78  FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALA 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD+ T + L+NG+C+   + EA  L  +M  +   PD VT+NTLI+  F
Sbjct: 138 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLF 197

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  LID +   G +P+  T+  ++   CK G ID A  +++ ME+     + V
Sbjct: 198 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVV 257

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNT+ID  CK  +M++AF + + M  KG+K +  T N+++  LC   +  +A  LL+  
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++ +LI  + ++ K   A KL+DEM +R I P+  TYN++I G     + 
Sbjct: 318 IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  +   ++    +PD  T+NT+I GFC   +VE+ ++   +M ++    + VT N L
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL + G  + A K F+  +  G   D +TY+ L+  LCK  +LE A  +   +++ K+
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+ YTY  +   + ++G++E+       +   G      V+PN            I Y+
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG------VKPNV-----------IIYT 540

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I+  C +G  ++A  +F E ++ G   +   Y    N LI+ R
Sbjct: 541 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCY----NTLIRAR 581



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 241/444 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT +++L+      +++E   L+  M + G  P+  T+N L+ G      
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 201

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ ++D M      PD++TY  ++NG C  G ++ A  L K+ME  K+  +VV YNT
Sbjct: 202 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNT 261

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +AF L ++++  GIKP+  T+N +I   C  G+   A +++ +M E  
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT+N+LIDA  K G + EA ++ D M ++ +  N +T N++++  C   +LDEA 
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 381

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +    D V+Y TLI G+ + ++    ++L+ EM +R ++ +T TYN +I GL
Sbjct: 382 QIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 441

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G  + A  +  +++  G+ PD  T++ ++ G C  G++EKAL     + +   +P+I
Sbjct: 442 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNI 501

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F S  LKG   + + Y T+IS  C++   E+A  L  E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 561

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    PD   Y  +  A +  G
Sbjct: 562 MKEDGTLPDSGCYNTLIRARLRDG 585



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/449 (32%), Positives = 238/449 (53%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT+NT++  LF   K +E   L+  M  +G  P+  TY  +V+G CK G 
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M + K   +V  YN +I+G C    +++AF L  +ME+  + PDV TYN+
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A +L+ ++ E  I PN VT N +I  + KEGK+ +A K+   M +  
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYN+LI+  C    ++EA ++  +M  K    + +T NT++   C  K+++E  
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G F+    + A K++ +M    + P   TY+ ++ GL
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK E+A+ +   L +S M P+  T+N +I G C  G+VE        +  K  KP++
Sbjct: 477 CKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +    ++SG CR+G+ E+A   FR     G   DS  YNTLI +  ++     +  L+ E
Sbjct: 537 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 596

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M       D  T + +   ++  GRLE++
Sbjct: 597 MRSCGFVGDASTISMV-INMLHDGRLEKS 624



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 253/528 (47%), Gaps = 19/528 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   ++ TY+ +L+   ++ +L     +L  M K G  P+  T + L++GYC    
Sbjct: 107 MQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 166

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +VD M +    PD  T+N LI+G        EA  L   M +    PD+ TY T
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   + G    A  L+ ++++  I+ N V +N +I   CK   +D A  +   ME  G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+LI   C  G   +A R++  M  + +  N +T N+++     E KL EA 
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   +R    + V+Y +LI G+   ++ + A +++  M  +  +P   TYN +I G 
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + E+ +++  E+ Q G++ +  T+NT+I G    G  + A +   KMV     PDI
Sbjct: 407 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 466

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLS 419
           +T +ILL GLC+ G LEKAL  F  ++ K K   ++ TYN +I  +CK  ++ED + L  
Sbjct: 467 ITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            +  K + P+   Y  + +     G  EEA      M E G +                 
Sbjct: 526 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL----------------- 568

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           P S  Y+  I      G    + ++ +E R  G   + ST   ++N L
Sbjct: 569 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/415 (33%), Positives = 218/415 (52%), Gaps = 1/415 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TY T+++ L K+G ++    LL  M+K  +  N   YN ++ G CK   
Sbjct: 212 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKH 271

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  + + M      PDV+TYN LI+  CN G   +A RL  +M   K+ P+VVT+N+
Sbjct: 272 MDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNS 331

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ +EA KL DE+ +  I PN VT+N +I  +C   ++D+A +I   M    
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTLI   CKA  +EE   +   M ++GL  NT+T NT++  L      D A 
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G   D ++Y  L+ G  +  K  +AL +++ +++ ++ P+ +TYN MI G+
Sbjct: 452 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM 511

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK E   D+   L   G+ P+   + T+I GFC +G  E+A     +M E    PD 
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
              N L+    R+G    + +  +     G   D+ T + +I+ L  + RLE ++
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 625



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 239/472 (50%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  ++ L++        +    L ++M++L +  +  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N F    +   A  ++ ++ + G +P+ VT + ++  YC   +I +A  +V  M E G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD VT+NTLI          EA  ++D M  +G + +  T  T+++ LC    +D A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    K     + V Y T+I G  + +  + A  L+++M+ + I P  FTYN++I  L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + P+  TFN++I  F  EG++ +A +  ++M+++S  P+I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L++G C    L++A + F   + K    D VTYNTLI   CK +R+E+   L  E
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L  +  TY  +   L ++G  + AQK    MV  G                 + P
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-----------------VPP 464

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I+YS  ++  C  G+ + AL +FE  ++  +  N  TY  ++ G+ K  K
Sbjct: 465 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 168/308 (54%), Gaps = 2/308 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N+++DA  K+GKL E   L  +M ++ + PN  TYN L++G+C    L EA ++
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM     LPDV TYN LI G+C A  +EE   L +EM    L+ + VTYNTLI   F+
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G    A K+  ++   G+ P+ +T++I++   CK GK++KA  +   ++++   P+  T
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I+  CKAG +E+ + +   +  KG+K N I   T++   C +   +EA  L     
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D   Y TLI    RD     + +L  EM+    +    T  +M+  +   G+ E
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLE 622

Query: 308 QA-IDMLN 314
           ++ ++ML+
Sbjct: 623 KSYLEMLS 630



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 185/386 (47%), Gaps = 20/386 (5%)

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           E K+D A  +   M ++   P  + ++ L+ A  K    +    + + M   G+  N  T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            + +L+  C   +L  A  +L    K GY  D V+  +L+ GY   ++ + A+ L D+M 
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           E    P T T+N +I GL    K  +A+ +++ ++  G  PD  T+ T+++G C  G ++
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            AL    KM +   + ++V  N ++ GLC+   ++ A   F     KG   D  TYN+LI
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           S LC   R  DA  LLS+M E+K+ P+  T+ ++  A  + G+L EA+K    M++   I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SI 357

Query: 463 NHQVVQPN-------------------TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           +  +V  N                   T    ++  P  ++Y+  I   C   R ++ ++
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           +F E  Q+G+  N  TY  L+ GL +
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQ 443


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 277/531 (52%), Gaps = 20/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ +    G+L+     L ++ K+G + +   +  ++ G C      +AM +
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   MTQ   +P+V++YN+L+ G C+    +EA  L + M  +     PDVV+Y T+IN 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A+    E+ + GI PN VT++ +I   CK   +DKA +++ +M +NG  P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+++   C +G  +EA   +  M   G++ + +T N+++  LC   +  EA  + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S +KRG   +  +YGTL+ GY           L D M    I P+ + ++ +I   ++ G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +QA+ + +++ Q G+ PD  T+ T+I   C  G+VE A+++  +M+++   P  +  N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC     +KA +     + +G  +D++ +N++I S CKE R+ ++  L   M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  TY+ +      +G+++EA K  + MV  G                 + P  ++
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG-----------------MKPDCVT 551

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           Y+  IN +C   R +DAL +F E    G++ +  TY  ++ GL + R++ +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602



 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 265/529 (50%), Gaps = 70/529 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y T+++  FK+G L++      +M  +G++PN  TY+ +++  CK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +AM V+  M +N  +P+  TYN +++G+C++G  +EA    K+M S  + PDVVTYN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           ++   ++GR  EA K+ D + + G+KP   T+                            
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  +I+I  Y K+GK+D+A  +   M + G +PD VTY T+I   CK+G +E+A R
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             + M  + L    I  N+++H+LC   K D+A  L+     RG  LD + + ++I  + 
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ +   + KL+D M    + P   TY+ +I G   +GK ++A  +L  ++  GM PD  
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------------ 368
           T+NT+I+G+C   ++E AL    +M      PDI+T NI+L                   
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 369 -----------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                            GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++A  L + +    L PD  TY+ +   L+E G LEE       M E G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 242/462 (52%), Gaps = 2/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+  +YN +L  L    +  E  +LL  M   G    P+  +Y  +++G+ K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L +A      M     LP+V TY+ +I   C A  +++A  +   M    ++P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N++++ +  SG+  EA   + ++   G++P+ VT+N ++ + CK G+  +A K+  +M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY TL+      G + E   ++D+M R G+  N    + ++     + K+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++ +   ++G   D V+YGT+I    +  +   A++ +++M + ++ P    YN++I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L    K ++A +++ E+L  G+  D   FN+II   C EG+V ++ +  + MV    KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI+T + L+ G C  G +++A K   S +  G   D VTYNTLI+  CK  R+EDA  L 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EME   + PD  TY  I   L ++ R   A++    + E+G
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 235/452 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   P+ + +++LI  +   G +++A  +  +M    L PD VTY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A +  +++ +  + P  + +N +I   C   K DKA +++  M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D + +N++ID++CK G + E+ ++ D+M R G+K + IT +T++   C   K+DEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           MEE     +     +I   L++ G +  A  +
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 197/388 (50%), Gaps = 26/388 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+ I++   C  G++D     + N+ + GF  D + +  ++   C      +A 
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDA- 145

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL--DEVSYG 259
             MD++ R+    G   N  + N +L  LC + +  EA  LL      G     D VSY 
Sbjct: 146 --MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T+I G+F++   ++A   + EM +R I+P+  TY+++I  L ++   ++A+++L  ++++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G++P+  T+N+I+HG+CS GQ ++A+ F  KM     +PD+VT N L+  LC+ G   +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K F S   +G   +  TY TL+     +  L +  GLL  M    + P+ Y ++ +  A
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             + G++++A    S M + G                 ++P +++Y   I   C  GR +
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQG-----------------LNPDTVTYGTVIGILCKSGRVE 426

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGL 527
           DA++ FE+   + ++     Y +L++ L
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSL 454



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 171/343 (49%), Gaps = 24/343 (6%)

Query: 211 MGRKG---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           M R G   +  N  T   ++ + CC  +LD  +  L +  K+G+ +D +++  ++ G   
Sbjct: 79  MARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCA 138

Query: 268 DEKANRALKL-WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPD 324
           D++ + A+ +    M +   +P+ F+YN ++ GL    ++++A+++L  +   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPD 198

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             ++ T+I+GF  EG ++KA   +++M+++   P++VT + +++ LC+   ++KA++   
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S +  G   +  TYN+++   C   + ++A G L +M    + PD  TY ++   L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 445 RLEEAQKFTSIMVETG-----KINHQVVQPNTSKTP-------------EEIDPSSISYS 486
           R  EA+K    M + G          ++Q   +K                 I P+   +S
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I  +  QG+   A+ +F + RQ+G+  +  TY  ++  L K
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 117/230 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYNT+++   K  ++ +   L  +M+  G+ P+  TYNI++ G  +   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   +T++ +  ++ TYN++++G C   + +EA R+ + +    L  +  T+N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + GR+ EA  L   L  +G+ P+  T+++M +   ++G +++   +  +MEENG
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + +    N+++    + G++  A   + ++  K   +   T +  L  L
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 245/459 (53%), Gaps = 1/459 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D VTYN+++D     G+  EV  LL+ M ++ + P+  T+NIL+   CK G + EA
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+ +M++    PD+ TYN L+ G+C+   + EA  L   M    L PDV+ YN LI+ 
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++    EA  L  EL    + P   ++N +I   C  G+I    K++  M  +   PD
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LIDA CK G + EA  ++ +M +KG+K N +T N ++   C    ++ A  + N
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   D ++Y  LI GY + E  + A+ L+ EM+ + ++P   +YN++I GL   G
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +     ++L+E+  SG  PD  T+N ++  FC     +KA+    ++VE  + PD  T +
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNH 583

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++  LC+   L+ A    +  ++ G + +  TY  LI++LCK+    +A  LLS+ME+ 
Sbjct: 584 AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDN 643

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
              PD  T+  I   L++    ++A+K    M+  G +N
Sbjct: 644 DRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 259/528 (49%), Gaps = 18/528 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+  +++  F +        LL+ + K G  PN  T+N +++G+C  G + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     +     L D +TY  LING    G ++ A  L +EME   + P++V Y+ LI+ 
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A  L  ++ E GI  +AVT+N +I   C  G+  +  +++  M      PD
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LIDA CK G + EA  ++ +M ++G K + +T N ++   C  + + EA  L N
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              KRG   D ++Y  LI GY + +  + A+ L+ E+  + ++P+  +YN++I GL  SG
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +      +L+E+  S   PD  T+N +I   C EG++ +AL     M++K  KP+IVT N
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C    +  A   F   +  G   D + YN LI+  CK   +++A  L  EM  K
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD  +Y ++   L   GR+   Q+    M ++G+                  P  I+
Sbjct: 505 NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ-----------------SPDVIT 547

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  ++  C    +  A+ +F +  + GI  +  T   +++ L K  K
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK 594



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 234/496 (47%), Gaps = 30/496 (6%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           C+   + +A+   + M +    P    ++ L+      G    A  L  +++S  + P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            T+  LIN +F    +  AF L+  + + G +PN VT N +I  +C  G I KA    +N
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           +   G+  D  TY TLI+   K G ++ A  ++  M +  ++ N +  + ++  LC +  
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + +A  L +   +RG  LD V+Y +LI G     +     +L  +M    + P  +T+N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + G+  +A  +L  + + G  PD  T+N ++ G+CS   V +A +  N+MV++ 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +PD++  N+L+ G C+  ++++A+  F+    K       +YN+LI  LC   R+    
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL EM      PD  TY  +  AL + GR+ EA     +M++ G      V+PN     
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG------VKPNIVTYN 444

Query: 476 EEID------------------------PSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             +D                        P  ++Y+  IN +C      +A+ +F+E R K
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504

Query: 512 GIAINKSTYMNLMNGL 527
            +  + ++Y +L++GL
Sbjct: 505 NLIPDIASYNSLIDGL 520



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 193/418 (46%), Gaps = 17/418 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P    ++ L+      G    A  L  +L   GI P+  T  I+I  Y  +     A  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  + ++G+ P+ VT+NT+I+  C  G + +A      +  +G   +  T  T+++ L  
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++  A  LL    K     + V Y  LI G  +D   + AL L  ++ ER I+    T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN++I G    G+ ++   +L ++++  + PD+ TFN +I   C EG++ +A      M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++  KPDIVT N L+ G C    + +A + F   + +G   D + YN LI   CK + ++
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  L  E+  K L P   +Y ++   L  SGR+   +K    M       H   QP   
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-------HGSAQP--- 402

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  P  ++Y+  I+  C +GR  +AL +     +KG+  N  TY  +M+G   R
Sbjct: 403 -------PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 17/337 (5%)

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           NC+  N+++A    + M R      T   + +L  +        A  L      +G    
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             ++  LI  YF       A  L   + +    P+  T+N +I G   +G   +A+D   
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            LL  G + D+ T+ T+I+G    GQ++ AL    +M + S +P++V  + L+ GLC++G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +  AL        +G  +D+VTYN+LI   C   R ++   LL++M  + + PD YT+ 
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +  AL + GR+ EAQ   ++M + G+                  P  ++Y+  +  +CS
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGE-----------------KPDIVTYNALMEGYCS 312

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +    +A ++F    ++G+  +   Y  L++G  K +
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 266/529 (50%), Gaps = 70/529 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y T+++  FK+G L++      +M  +G++PN  TYN +++  CK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAM 250

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +AM V+  M +N  +P+  TYN +++G+C++G  +EA    K+M S  + PDVVTYN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           ++   ++GR  EA K+ D + + G+KP   T+                            
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  +I+I  Y K+GK+D+A  +   M + G +PD VTY T+I   CK+G +E+A R
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             + M  + L    I  N+++H+LC   K D+A  L+     RG  LD + + ++I  + 
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ +   + KL+D M    + P+  TY+ +I G   +GK ++A  +L  ++  GM PD  
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------------ 368
           T+NT+I+G+C   ++E AL    +M      PDI+T NI+L                   
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 369 -----------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                            GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++A  L + +    L PD  TY+ +   L+E G LEE       M E G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 276/531 (51%), Gaps = 20/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ +    G+L+     L ++ K+G   +   +  L+ G C      +AM +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   MTQ   +P+V++YN+L+ G C+    +EA  L + M  +     PDVV+Y T+IN 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A+    E+ + GI PN VT+N +I   CK   +DKA +++ +M +NG  P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+++   C +G  +EA   +  M   G++ + +T N+++  LC   +  EA  + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S +KRG   +  +YGTL+ GY           L D M    I P+ + ++ +I   ++ G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +QA+ + +++ Q G+ PD  T+ T+I   C  G+VE A+++  +M+++   P  +  N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC     +KA +     + +G  +D++ +N++I S CKE R+ ++  L   M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  TY+ +      +G+++EA K  + MV  G                 + P  ++
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG-----------------MKPDCVT 551

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           Y+  IN +C   R +DAL +F E    G++ +  TY  ++ GL + R++ +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 243/462 (52%), Gaps = 2/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+  +YN +L  L  + +  E  +LL  M   G    P+  +Y  +++G+ K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L +A      M     LP+V TYN +I   C A  +++A  +   M    ++P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N++++ +  SG+  EA   + ++   G++P+ VT+N ++ + CK G+  +A K+  +M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY TL+      G + E   ++D+M R G+  N    + ++     + K+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++ +   ++G   D V+YGT+I    +  +   A++ +++M + ++ P    YN++I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L    K ++A +++ E+L  G+  D   FN+II   C EG+V ++ +  + MV    KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +I+T + L+ G C  G +++A K   S +  G   D VTYNTLI+  CK  R+EDA  L 
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EME   + PD  TY  I   L ++ R   A++    + E+G
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 235/452 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   P+ + +++LI  +   G +++A  +  +M    L PD VTY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A +  +++ +  + P  + +N +I   C   K DKA +++  M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D + +N++ID++CK G + E+ ++ D+M R G+K N IT +T++   C   K+DEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           MEE     +     +I   L++ G +  A  +
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 197/388 (50%), Gaps = 26/388 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+ I+I   C  G++D     + N+ + GF  D + +  L+   C      +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA- 145

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL--DEVSYG 259
             MD++ R+    G   N  + N +L  LC E +  EA  LL      G     D VSY 
Sbjct: 146 --MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T+I G+F++   ++A   + EM +R I+P+  TYN++I  L ++   ++A+++L  ++++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G++P+  T+N+I+HG+CS GQ ++A+ F  KM     +PD+VT N L+  LC+ G   +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K F S   +G   +  TY TL+     +  L +  GLL  M    + P+ Y ++ +  A
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             + G++++A    S M + G                 ++P +++Y   I   C  GR +
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQG-----------------LNPDTVTYGTVIGILCKSGRVE 426

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGL 527
           DA++ FE+   + ++     Y +L++ L
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSL 454



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 171/343 (49%), Gaps = 24/343 (6%)

Query: 211 MGRKG---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           M R G   +  N  T   ++ + CC  +LD  +  L +  K+G+ +D +++  L+ G   
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 268 DEKANRALKL-WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPD 324
           D++ + A+ +    M +   +P+ F+YN ++ GL    ++++A+++L  +   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             ++ T+I+GF  EG ++KA   +++M+++   P++VT N +++ LC+   ++KA++   
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLT 258

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S +  G   +  TYN+++   C   + ++A G L +M    + PD  TY ++   L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 445 RLEEAQKFTSIMVETG-----KINHQVVQPNTSKTP-------------EEIDPSSISYS 486
           R  EA+K    M + G          ++Q   +K                 I P+   +S
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I  +  QG+   A+ +F + RQ+G+  +  TY  ++  L K
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 117/230 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYNT+++   K  ++ +   L  +M+  G+ P+  TYNI++ G  +   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   +T++ +  ++ TYN++++G C   + +EA R+ + +    L  +  T+N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + GR+ EA  L   L  +G+ P+  T+++M +   ++G +++   +  +MEENG
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + +    N+++    + G++  A   + ++  K   +   T +  L  L
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/464 (32%), Positives = 254/464 (54%), Gaps = 2/464 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG LPD  T+ TI+    ++G L+    +   M + G V    T N+LV+G+CK G 
Sbjct: 221 MEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGR 280

Query: 61  LKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           ++EA+R ++ M+  +   PD +T+NML+NG    G ++ A  +   M      PD+ TYN
Sbjct: 281 IEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYN 340

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +LI+   + G   EA K+++++ E    PN VT+N +I   CKE ++++A K+   +   
Sbjct: 341 SLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGK 400

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  TYN+LI   C + N   A  +   M  KG   +  T N ++ +LC   KL EA
Sbjct: 401 GILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEA 460

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL      G   + ++Y TLI G+ ++++   A +++D+M+ + +  ++ TYN +I G
Sbjct: 461 LNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDG 520

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +S + E+A  ++++++  G+ PD+ T+N+++  FC  G ++KA      M     +PD
Sbjct: 521 LCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPD 580

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           IVT   L++GLC+ G +E A K  R+  +KG  +    YN +I +L + +R ++A  L  
Sbjct: 581 IVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFR 640

Query: 420 EMEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           EM EK   PD  TY  +   L +  G + EA  F   M+E G +
Sbjct: 641 EMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYV 684



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 274/537 (51%), Gaps = 18/537 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG + +   YN +L+ L    KL  V    S+M  +G+ P+ +T+NIL+   C+   ++ 
Sbjct: 154 FGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRP 213

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +++ M     LPD  T+  ++ G+   G L+ A R++++M     +   VT N L+N
Sbjct: 214 AILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVN 273

Query: 124 RFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
            F + GR  EA + I+E+    G  P+  T N+++    K G +  A +++  M   GF 
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  TYN+LI   CK G ++EA ++++ M  +    NT+T NTI+ TLC E +++EA  L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   D  +Y +LI G         A++L+ EMK +   P  FTYN +I  L  
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK ++A+++L E+  SG   +  T+NT+I GFC   ++ +A +  ++M  +    + VT
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ GLC+   +E+A +     I++G   D  TYN+L++  CK   ++ A  ++  M 
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
                PD  TY  +   L ++GR+E A K    +   G                 I+ + 
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKG-----------------INLTP 616

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            +Y+  I     + R K+A+++F E  +K  A +  TY  +  GL +    I +AVD
Sbjct: 617 HAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVD 673



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 194/351 (55%), Gaps = 1/351 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VTYNTI+  L K+ ++ E   L   +  +G++P+  TYN L+ G C       AM
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M      PD +TYNMLI+  C  G L+EA  L KEME      +V+TYNTLI+ F
Sbjct: 427 ELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGF 486

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++ R  EA ++ D+++  G+  N+VT+N +I   CK  ++++A +++  M   G  PD 
Sbjct: 487 CKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDK 546

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TYN+L+   CKAG++++A  ++  M   G + + +T  T++  LC   +++ A  LL +
Sbjct: 547 FTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRT 606

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG- 304
              +G  L   +Y  +I   FR +++  A++L+ EM E+   P   TY  +  GL Q G 
Sbjct: 607 IQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGG 666

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
              +A+D + E+L+ G +P+ ++F  +  G  S   V   ++  + ++EK+
Sbjct: 667 PIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKA 717



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 251/534 (47%), Gaps = 55/534 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P +  +  +L  L K G+ + ++D+L +MK    V +  +  + +  Y   G   E ++ 
Sbjct: 87  PSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQF 146

Query: 68  VDLM-TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           VD M  +   + +   YN L+N   +                LKL+   + ++ +++R  
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGN-------------KLKLVE--IAHSNMVSR-- 189

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
                             GI+P+  T NI+IK  C+  +I  A  ++  ME+ G  PD  
Sbjct: 190 ------------------GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEK 231

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+ T++    + GN++ A R+ + M   G  +  +T+N +++  C E +++EA   +   
Sbjct: 232 TFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM 291

Query: 247 SKR-GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
           S R G++ D+ ++  L+ G  +      AL++ D M      P  +TYN++I GL + G+
Sbjct: 292 SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE 351

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A+ +LN++++    P+  T+NTII   C E QVE+A +    +  K   PD+ T N 
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GLC       A++ ++    KG   D  TYN LI SLC   +L++A  LL EME   
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
              +  TY  +     ++ R+ EA++    M   G                 +  +S++Y
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQG-----------------VSRNSVTY 514

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +  I+  C   R ++A Q+ ++   +G+  +K TY +L+    K    I KA D
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCK-AGDIKKAAD 567


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 276/531 (51%), Gaps = 20/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ +    G+L+     L ++ K+G   +   +  L+ G C      +AM +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   MTQ   +P+V++YN+L+ G C+    +EA  L + M  +     PDVV+Y T+IN 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A+    E+ + GI PN VT++ +I   CK   +DKA +++ +M +NG  P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+++   C +G  +EA   +  M   G++ + +T N+++  LC   +  EA  + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S +KRG   +  +YGTL+ GY           L D M    I P+ + ++ +I   ++ G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +QA+ + +++ Q G+ PD  T+ T+I   C  G+VE A+++  +M+++   P  +  N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC     +KA +     + +G  +D++ +N++I S CKE R+ ++  L   M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  TY+ +      +G+++EA K  + MV  G                 + P  ++
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG-----------------MKPDCVT 551

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           Y+  IN +C   R +DAL +F E    G++ +  TY  ++ GL + R++ +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602



 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 265/529 (50%), Gaps = 70/529 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y T+++  FK+G L++      +M  +G++PN  TY+ +++  CK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +AM V+  M +N  +P+  TYN +++G+C++G  +EA    K+M S  + PDVVTYN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           ++   ++GR  EA K+ D + + G+KP   T+                            
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  +I+I  Y K+GK+D+A  +   M + G +PD VTY T+I   CK+G +E+A R
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             + M  + L    I  N+++H+LC   K D+A  L+     RG  LD + + ++I  + 
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ +   + KL+D M    + P   TY+ +I G   +GK ++A  +L  ++  GM PD  
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------------ 368
           T+NT+I+G+C   ++E AL    +M      PDI+T NI+L                   
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 369 -----------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                            GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++A  L + +    L PD  TY+ +   L+E G LEE       M E G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 243/462 (52%), Gaps = 2/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+  +YN +L  L  + +  E  +LL  M   G    P+  +Y  +++G+ K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L +A      M     LP+V TY+ +I   C A  +++A  +   M    ++P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N++++ +  SG+  EA   + ++   G++P+ VT+N ++ + CK G+  +A K+  +M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY TL+      G + E   ++D+M R G+  N    + ++     + K+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++ +   ++G   D V+YGT+I    +  +   A++ +++M + ++ P    YN++I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L    K ++A +++ E+L  G+  D   FN+II   C EG+V ++ +  + MV    KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI+T + L+ G C  G +++A K   S +  G   D VTYNTLI+  CK  R+EDA  L 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EME   + PD  TY  I   L ++ R   A++    + E+G
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 235/452 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   P+ + +++LI  +   G +++A  +  +M    L PD VTY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A +  +++ +  + P  + +N +I   C   K DKA +++  M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D + +N++ID++CK G + E+ ++ D+M R G+K + IT +T++   C   K+DEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           MEE     +     +I   L++ G +  A  +
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 197/388 (50%), Gaps = 26/388 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+ I+I   C  G++D     + N+ + GF  D + +  L+   C      +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA- 145

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL--DEVSYG 259
             MD++ R+    G   N  + N +L  LC E +  EA  LL      G     D VSY 
Sbjct: 146 --MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T+I G+F++   ++A   + EM +R I+P+  TY+++I  L ++   ++A+++L  ++++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G++P+  T+N+I+HG+CS GQ ++A+ F  KM     +PD+VT N L+  LC+ G   +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K F S   +G   +  TY TL+     +  L +  GLL  M    + P+ Y ++ +  A
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             + G++++A    S M + G                 ++P +++Y   I   C  GR +
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQG-----------------LNPDTVTYGTVIGILCKSGRVE 426

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGL 527
           DA++ FE+   + ++     Y +L++ L
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSL 454



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 171/343 (49%), Gaps = 24/343 (6%)

Query: 211 MGRKG---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           M R G   +  N  T   ++ + CC  +LD  +  L +  K+G+ +D +++  L+ G   
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 268 DEKANRALKL-WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPD 324
           D++ + A+ +    M +   +P+ F+YN ++ GL    ++++A+++L  +   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             ++ T+I+GF  EG ++KA   +++M+++   P++VT + +++ LC+   ++KA++   
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S +  G   +  TYN+++   C   + ++A G L +M    + PD  TY ++   L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 445 RLEEAQKFTSIMVETG-----KINHQVVQPNTSKTP-------------EEIDPSSISYS 486
           R  EA+K    M + G          ++Q   +K                 I P+   +S
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I  +  QG+   A+ +F + RQ+G+  +  TY  ++  L K
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 117/230 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYNT+++   K  ++ +   L  +M+  G+ P+  TYNI++ G  +   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   +T++ +  ++ TYN++++G C   + +EA R+ + +    L  +  T+N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + GR+ EA  L   L  +G+ P+  T+++M +   ++G +++   +  +MEENG
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + +    N+++    + G++  A   + ++  K   +   T +  L  L
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 246/460 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F  LP   + N  L  L K G+ +  RD   DM   G+ P   TYNI++   CK G 
Sbjct: 88  MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGD 147

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + + M +    PD+ TYN LI+G+   G+L+E+  L +EM+ +   PDV+TYN 
Sbjct: 148 MLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA 207

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +    + AF+   E+ +  +KPN ++++ +I   CKEG +  A K   +M   G
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY++LIDANCKAGN+ EAF + D M ++ + +N +T  T+L  LC E  ++EA 
Sbjct: 268 LLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAE 327

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +  K G   +  +Y  LI G+ +    ++A++L++EM+E+ I P    +  ++WGL
Sbjct: 328 ELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGL 387

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K E+   ++ E+ +SG+  +   + T++  +   G   +A+    +M +   +  +
Sbjct: 388 CSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTV 447

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L+ GLC+ G++++A+ +F          +   Y  LI  LCK   + DA  L  E
Sbjct: 448 VTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDE 507

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M++K + PD+  Y A+    ++ G  +EA    + M+E G
Sbjct: 508 MQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 242/513 (47%), Gaps = 17/513 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN ++  + K+G +   R L   MKK GL P+  TYN L+ GY K+G 
Sbjct: 123 MVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGL 182

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E++ + + M      PDV TYN LIN +C    +  AF   +EM+   L P+V++Y+T
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A K   ++   G+ PN  T++ +I   CK G + +A  +   M +  
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + VTY TL+D  C+ G M EA  +   MG+ G+  N      ++H     + +D+A 
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N   ++    D + +GT++ G   + K      +  EMKE  I  +   Y  ++   
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +AI++L E+   G      TF  +I G C  G V++A+ +  +M +   +P++
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                L+ GLC+   +  A K F     K    D + Y  +I    K    ++A  + ++
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M E  +  D Y Y ++   L + G++++A+KF + M+  G I                 P
Sbjct: 543 MMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGII-----------------P 585

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                +  + +H   G   +A+++  E  +KG+
Sbjct: 586 DETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 235/472 (49%), Gaps = 2/472 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTYNT++D   K G L+E   L  +MK  G  P+  TYN L++ +CK   
Sbjct: 158 MKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKG 217

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A      M      P+V +Y+ LI+  C  GM++ A +   +M  + LLP+  TY++
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSS 277

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G   EAF L DE+ +  +  N VT+  ++   C+EG +++A ++ R M + G
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+   Y  LI  + K  +M++A  + + M  K +K + +   TI+  LC E KL+E  
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECK 397

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +++    + G   + V Y TL+  YF+      A+ L +EM++     +  T+ A+I GL
Sbjct: 398 IIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGL 457

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++AI     +    + P+   +  +I G C    +  A +  ++M +K+  PD 
Sbjct: 458 CKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDK 517

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +    ++ G  + G  ++AL      +  G  +D   Y +L+  L +  +++ A   L+E
Sbjct: 518 IAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAE 577

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI--NHQVVQPN 470
           M  K + PD      +     E G ++EA +  + +VE G I  N     PN
Sbjct: 578 MIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGNSNPAVPN 629



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 232/510 (45%), Gaps = 30/510 (5%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           VP    ++ L S   +LG L+ A +    MT+ + LP   + N  ++    AG  + +  
Sbjct: 59  VPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD 118

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
             ++M    + P V TYN +I    + G  + A  L +++ + G+ P+ VT+N +I  Y 
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K G +D++  +   M+  G  PD +TYN LI++ CK   M  AF     M  K LK N I
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVI 238

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           + +T++  LC E  +  A       ++ G   +E +Y +LI    +      A  L DEM
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            +  +  +  TY  ++ GL + G   +A ++   + ++G+ P+   +  +IHG      +
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           +KA++  N+M EK  KPDI+    ++ GLC E  LE+           G   + V Y TL
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTL 418

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           + +  K     +A  LL EM +        T+ A+   L + G ++EA  +       G+
Sbjct: 419 MDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYY------FGR 472

Query: 462 INHQVVQPNTSKTPEEID------------------------PSSISYSEKINEHCSQGR 497
           +    +QPN +     ID                        P  I+Y+  I+ +   G 
Sbjct: 473 MPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGN 532

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +++AL +  +  + GI ++   Y +L+ GL
Sbjct: 533 FQEALNMRNKMMEMGIELDLYAYTSLVWGL 562



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 168/384 (43%), Gaps = 21/384 (5%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N +   ++  W      + +     RN+   GF      ++ L     + G +E A +  
Sbjct: 30  NILKELVLSSWVLPGSDVFEILWTTRNVCVPGFG----VFDALFSVLVELGMLEAAGQCF 85

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M +  +     + N  LH L    + D +          G      +Y  +I    ++
Sbjct: 86  LRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKE 145

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A  L+++MK+  + P   TYN +I G  + G  ++++ +  E+   G  PD  T+
Sbjct: 146 GDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITY 205

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+ FC    + +A +F  +M +K  KP++++ + L+  LC+EG+++ A+KFF     
Sbjct: 206 NALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTR 265

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   +  TY++LI + CK   L +AF L  EM ++ +  +  TY  +   L E G + E
Sbjct: 266 VGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNE 325

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A++    M + G      V PN             +Y+  I+ H        A+++F E 
Sbjct: 326 AEELFRAMGKAG------VTPNLQ-----------AYTALIHGHIKVRSMDKAMELFNEM 368

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
           R+K I  +   +  ++ GL    K
Sbjct: 369 REKDIKPDILLWGTIVWGLCSESK 392



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 19/277 (6%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M + +++P   + NA +  LS++G+ + + D   +++ +G+ P   T+N +I   C EG 
Sbjct: 88  MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGD 147

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           +  A     +M +    PDIVT N L+ G  + G+L++++  F      G   D +TYN 
Sbjct: 148 MLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA 207

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           LI+S CK + +  AF    EM++K L P+  +Y+ +  AL + G ++ A KF   M   G
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267

Query: 461 KINHQ-----VVQPNTSK-------------TPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            + ++     ++  N                  E +D + ++Y+  ++  C +G   +A 
Sbjct: 268 LLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAE 327

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           ++F    + G+  N   Y  L++G IK R S+ KA++
Sbjct: 328 ELFRAMGKAGVTPNLQAYTALIHGHIKVR-SMDKAME 363


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 279/536 (52%), Gaps = 24/536 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D V YN+++  L + G+++  RD++  MK+ G+ PN  TY + +  YC+   
Sbjct: 200 MKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNA 259

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  + + M +   LPDV T + L+ G C  G   EA+ L +EME +   P+ VTY  
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++ R  E+  L+ E+   G+  + + +  ++ W CKEGKID+A  + R+   + 
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY  LIDA CKAGN++ A +++  M  K +  N +T ++I++ L     + +A 
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    +RG   + V+YGT+I G F+      AL ++ EM    +  + F  ++++ GL
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK E+A  +  E+ + G++ D   + T+I G    G +  A +   ++ EK+  PD 
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N+ ++ LC  G  ++A  F       G   D VTYNT+I++  +E +   A  LL+ 
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+   + P+  TY+ +   L E+G +E+A+   + M  +G                   P
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG-----------------FSP 662

Query: 481 SSISYSEKINEHCSQGRYKD-ALQIFEETRQKGIAINKSTYMNLM-----NGLIKR 530
           +S+++  ++ + CSQGR  D  L+I E     G+  + + Y  L+     NG+ ++
Sbjct: 663 TSLTH-RRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRK 717



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 267/585 (45%), Gaps = 55/585 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P++VTY  ++D L K  + NE   LL ++  +G+V +   Y  L+   CK G 
Sbjct: 305 MEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGK 364

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +      +   P+  TY +LI+  C AG ++ A ++  EME   + P+VVT+++
Sbjct: 365 IDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSS 424

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI--KWYC----------------- 161
           +IN   + G   +A   + E+ E GI PN VT+  +I   + C                 
Sbjct: 425 IINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEG 484

Query: 162 ----------------KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                           K GKI+KA  + R M E G   D V Y TLID   K GN+  AF
Sbjct: 485 VEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAF 544

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++   +  K L  + +  N  ++ LC   K  EA   L      G   D+V+Y T+I   
Sbjct: 545 KVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQ 604

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R+ K  +ALKL + MK   I P+  TY+ +I GL ++G  E+A  +LNE+  SG  P  
Sbjct: 605 SREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTS 664

Query: 326 TTFNTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
            T   ++   CS+G + +  L+ H  M+      DI   N L+  LC  G+  KA+    
Sbjct: 665 LTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLE 723

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +G A D++T+N LI    K   L++AF    +M    + P+  T+  +   L  +G
Sbjct: 724 EMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAG 783

Query: 445 RLEEAQKFTSIM----VETGKINHQVVQPNTSKTPEEID--------------PSSISYS 486
           R+ E+    + M    +E   + + ++     K   +++              P   +Y+
Sbjct: 784 RIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYN 843

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I++    G    A ++F E + +G+     TY  L++G  K R
Sbjct: 844 ALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLR 888



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 261/565 (46%), Gaps = 52/565 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD VT + ++  L K G+ +E   L  +M+K G  PN  TY +L+    K     E+
Sbjct: 274 GVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNES 333

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +     + D+  Y  L++  C  G ++EA  + +   S    P+ VTY  LI+ 
Sbjct: 334 LSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDA 393

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G    A +++ E++E  I PN VT + +I    K G + KA   +R M+E G  P+
Sbjct: 394 LCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY T+ID + K    E A  +   M  +G+++N   ++++++ L    K+++A  L  
Sbjct: 454 VVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFR 513

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++RG  LD V+Y TLI G F+      A K+  E+ E+ ++P    YN  I  L   G
Sbjct: 514 EMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLG 573

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K+++A   L E+  +G+ PD+ T+NT+I     EG+  KAL+  N M   S KP+++T +
Sbjct: 574 KSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYS 633

Query: 365 ILLSGLCREGILEKALKFF----------------------------------RSWIL-K 389
            L+ GL   G +EKA                                        W++  
Sbjct: 634 TLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNA 693

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   D   YNTL+  LC       A  +L EM  + + PD  T+ A+     +SG L+ A
Sbjct: 694 GLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNA 753

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 M+  G                 I P+  +++  +    S GR  ++  +  E +
Sbjct: 754 FSTYDQMLYHG-----------------ISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSI 534
           ++GI  +  TY  L+ G  K+   +
Sbjct: 797 KRGIEPSNLTYDILVTGYGKQSNKV 821



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 227/439 (51%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           +++++ L K GK+ +   L  +M ++G++ +   Y  L+ G  K G L  A +V   +T+
Sbjct: 493 DSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
              LPD   YN+ IN  C  G  +EA    +EM+S  L PD VTYNT+I      G++ +
Sbjct: 553 KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAK 612

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A KL++ +    IKPN +T++ +I    + G ++KA  ++  M  +GFSP  +T+  ++ 
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A  +    +    + + M   GL  +    NT++  LC      +A ++L   S RG   
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAP 732

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D +++  LI G+F+    + A   +D+M    I P+  T+N ++ GL  +G+  ++  +L
Sbjct: 733 DTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVL 792

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           NE+ + G+ P   T++ ++ G+  +    +A++ + +MV K F P + T N L+S   + 
Sbjct: 793 NEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKV 852

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++ +A + F     +G    S TY+ L+S   K R   +    L +M+EK   P + T 
Sbjct: 853 GMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTL 912

Query: 434 AAIHTALVESGRLEEAQKF 452
           ++I  A  + G   EA++ 
Sbjct: 913 SSISRAFSKPGMSWEARRL 931



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 254/548 (46%), Gaps = 53/548 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V+YN ++    ++G L     LL++M K+G+  +  T N ++ G C+ G +  A  + 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           ++M +   +  +                                 DVV +N+L++ + + 
Sbjct: 161 EVMVRGGGIGGL---------------------------------DVVGWNSLVDGYCKV 187

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    AF + + +   G+  + V +N ++   C+ G++D A  +V  M+ +G  P+ VTY
Sbjct: 188 GDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTY 247

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
              I   C+   +++AF + + M RKG+  + +TL+ ++  LC + +  EAY L     K
Sbjct: 248 TMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEK 307

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   + V+Y  LI    + ++ N +L L  E+  R ++     Y A++  L + GK ++
Sbjct: 308 IGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDE 367

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A DM    L     P+  T+  +I   C  G V+ A Q  ++M EKS  P++VT + +++
Sbjct: 368 AKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIIN 427

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL + G + KA  + R    +G   + VTY T+I    K    E A  +  EM  + +  
Sbjct: 428 GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV 487

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVV---------QPNTSKTP 475
           +++   ++   L ++G++E+A+     M E G     +N+  +          P   K  
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVG 547

Query: 476 EEID-----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +E+      P ++ Y+  IN  C  G+ K+A    EE +  G+  ++ TY N M     R
Sbjct: 548 QELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTY-NTMIAAQSR 606

Query: 531 RKSISKAV 538
               +KA+
Sbjct: 607 EGKTAKAL 614



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 197/416 (47%), Gaps = 35/416 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D+V Y T++D LFK G L     +  ++ ++ L+P+   YN+ ++  C LG  KEA
Sbjct: 519 GVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEA 578

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              ++ M      PD  TYN +I      G   +A +L   M+   + P+++TY+TLI  
Sbjct: 579 ESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVG 638

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTH------------------------------- 153
            FE+G   +A  L++E+   G  P ++TH                               
Sbjct: 639 LFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCAD 698

Query: 154 ----NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
               N +++  C  G   KA  ++  M   G +PD +T+N LI  + K+G+++ AF   D
Sbjct: 699 ITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYD 758

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G+  N  T NT+L  L    ++ E+ M+LN   KRG     ++Y  L+TGY +  
Sbjct: 759 QMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQS 818

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               A++L+ EM  +  +P   TYNA+I   S+ G   QA ++ NE+   G++P   T++
Sbjct: 819 NKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYD 878

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            ++ G+       +  +F   M EK F P   T + +     + G+  +A +  ++
Sbjct: 879 ILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKN 934



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 172/339 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTYNT++ A  ++GK  +   LL+ MK+  + PN  TY+ L+ G  + G 
Sbjct: 585 MQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGA 644

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  +++ M+ +   P   T+  ++         +    + + M +  L  D+  YNT
Sbjct: 645 VEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNT 704

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     +G + +A  +++E+   GI P+ +T N +I  + K G +D A      M  +G
Sbjct: 705 LVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG 764

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+  T+NTL+     AG + E+  +++ M ++G++ + +T + ++     +    EA 
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +G+     +Y  LI+ + +    ++A +L++EM+ R ++P++ TY+ ++ G 
Sbjct: 825 RLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           S+     +    L ++ + G  P + T ++I   F   G
Sbjct: 885 SKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPG 923



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 106/208 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD +T+N ++   FK G L+        M   G+ PN  T+N L+ G    G 
Sbjct: 725 MSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGR 784

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E+  V++ M +    P   TY++L+ G+       EA RL  EM     LP V TYN 
Sbjct: 785 IGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNA 844

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   +A +L +E+   G+ P + T++I++  + K     +  K +++M+E G
Sbjct: 845 LISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKG 904

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           FSP   T +++  A  K G   EA R++
Sbjct: 905 FSPSKGTLSSISRAFSKPGMSWEARRLL 932



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 97/172 (56%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  T+NT+L  L   G++ E   +L++MKK+G+ P+  TY+ILV+GY K     EA
Sbjct: 764 GISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEA 823

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+   M     LP V TYN LI+ +   GM+ +A  L  EM++  +LP   TY+ L++ 
Sbjct: 824 VRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSG 883

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           + +     E  K + ++ E G  P+  T + + + + K G   +A ++++N+
Sbjct: 884 WSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 70/141 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P N+TY+ ++    K+    E   L  +M  +G +P  +TYN L+S + K+G 
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  + + M     LP   TY++L++GW       E  +  K+M+     P   T ++
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914

Query: 121 LINRFFESGRSMEAFKLIDEL 141
           +   F + G S EA +L+  L
Sbjct: 915 ISRAFSKPGMSWEARRLLKNL 935


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 257/531 (48%), Gaps = 48/531 (9%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G  P+   YN ++        L  A R  D M  +   P+V+TYN+L+   C  G  +EA
Sbjct: 118 GYAPSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
             + ++M      P+ VTYNTL+  F  +G    A +L+D + E G+KPN VT N ++  
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CK G+++ A K+   M + G +PD V+YNTL+   CK G   EA  +   M RKG+  +
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T  +++H +C    L+ A  L+    +RG  ++E+++  LI G+ +    + AL    
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM++ +I PS   YNA+I G    G+ ++A +++ E+   G+ PD  T++TI+  +C  G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
               A Q + +M+E    PD +T + L+  LC E  L  A   F++ I  G   D VTY 
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF------- 452
           +LI   CKE  +E A  L  EM +  + PD  TY+ +   L +S R +EAQ+        
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 453 ---------------------------------TSIMVETGKINHQVVQPNTSKTPEEID 479
                                              +M E  K+   ++  N +     +D
Sbjct: 537 EPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN-----LD 591

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            S   YS  I+ HC +G    AL   ++  Q G A N ++ ++L+ GL ++
Sbjct: 592 GS--VYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEK 640



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 240/455 (52%), Gaps = 50/455 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC P+ VTYNT++ A  + G+++    L+  M++ GL PN  T+N +V+G CK G 
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A +V D M +    PD  +YN L+ G+C  G   EA  +  EM    ++PDVVT+ +
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302

Query: 121 LINRFFESGRSMEAFKLIDELDEHG----------------------------------- 145
           LI+   ++G    A  L+ E+ E G                                   
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+P+ V +N +I  YC  G++D+A ++VR ME  G  PD VTY+T++ A CK G+   AF
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++   M   G+  + IT ++++  LC EK+L +A++L  +    G   DEV+Y +LI G+
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++    RAL L DEM +  ++P   TY+ +I GLS+S +T++A  +L +L     +P  
Sbjct: 483 CKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPAN 542

Query: 326 TTFNTIIH---------------GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
             ++ ++                GFC +G + +A + +  ++++++  D    ++L+ G 
Sbjct: 543 IKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGH 602

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           CREG + KAL F +  +  G A +S +  +LI  L
Sbjct: 603 CREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL 637



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 241/474 (50%), Gaps = 50/474 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VT+N++++ + K G++ + R +  +M K+GL P+  +YN LV GYCK+G   EA
Sbjct: 222 GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V   MT+   +PDV T+  LI+  C AG LE A  L +EM    L  + +T+  LI+ 
Sbjct: 282 LSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDG 341

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G   +A   + E+ +  I+P+ V +N +I  YC  G++D+A ++VR ME  G  PD
Sbjct: 342 FCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPD 401

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY+T++ A CK G+   AF++   M   G+  + IT ++++  LC EK+L +A++L  
Sbjct: 402 VVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +    G   DEV+Y +LI G+ ++    RAL L DEM +  ++P   TY+ +I GLS+S 
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521

Query: 305 KTEQAIDMLNELLQSGMIP----------------------------------------- 323
           +T++A  +L +L     +P                                         
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQ 581

Query: 324 ---------DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
                    D + ++ +IHG C EG V KAL FH +M++  F P+  +   L+ GL  +G
Sbjct: 582 SILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKG 641

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           ++ +A +  +  +      D+     LI    KE  ++    +L  M    L P
Sbjct: 642 MVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 225/421 (53%), Gaps = 18/421 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P V+ YN ++    ++     A +  D +   G+ PN  T+NI+++  C  G   +A  +
Sbjct: 121 PSVLAYNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +R+M   G  P+ VTYNTL+ A C+AG ++ A R++D+M   GLK N +T N++++ +C 
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++++A  + +   K G   D VSY TL+ GY +   ++ AL ++ EM  + IMP   T
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           + ++I  + ++G  E+A+ ++ E+ + G+  +E TF  +I GFC +G ++ AL    +M 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           +   +P +V  N L++G C  G +++A +  R    KG   D VTY+T++S+ CK     
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            AF L  +M E  + PD  TY+++   L E  RL +A      M+  G            
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG------------ 467

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                + P  ++Y+  I+ HC +G  + AL + +E  + G+  +  TY  L+NGL K  +
Sbjct: 468 -----LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522

Query: 533 S 533
           +
Sbjct: 523 T 523



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 15/304 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VTY+TIL A  K G  +    L   M + G++P+  TY+ L+   C+   
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +   M      PD  TY  LI+G C  G +E A  L  EM    +LPDVVTY+ 
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM---------------IKWYCKEGK 165
           LIN   +S R+ EA +L+ +L      P  + ++ +               +K +C +G 
Sbjct: 513 LINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGL 572

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +++A K+ +++ +  ++ D   Y+ LI  +C+ GN+ +A      M + G   N+ +  +
Sbjct: 573 MNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTIS 632

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++  L  +  + EA  ++          D  +   LI    ++   +  L +   M    
Sbjct: 633 LIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDG 692

Query: 286 IMPS 289
           ++PS
Sbjct: 693 LLPS 696


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 276/531 (51%), Gaps = 20/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ +    G+L+     L ++ K+G   +   +  L+ G C      +AM +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   MTQ   +P+V++YN+L+ G C+    +EA  L + M  +     PDVV+Y T+IN 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A+    E+ + GI PN VT++ +I   CK   +DKA +++ +M +NG  P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+++   C +G  +EA   +  M   G++ + +T N+++  LC   +  EA  + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S +KRG   +  +YGTL+ GY           L D M    I P+ + ++ +I   ++ G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +QA+ + +++ Q G+ PD  T+ T+I   C  G+VE A+++  +M+++   P  +  N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC     +KA +     + +G  +D++ +N++I S CKE R+ ++  L   M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  TY+ +      +G+++EA K  + MV  G                 + P  ++
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG-----------------MKPDCVT 551

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           Y+  IN +C   R +DAL +F E    G++ +  TY  ++ GL + R++ +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602



 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 265/529 (50%), Gaps = 70/529 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y T+++  FK+G L++      +M  +G++PN  TY+ +++  CK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +AM V+  M +N  +P+  TYN +++G+C++G  +EA    K+M S  + PDVVTYN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           ++   ++GR  EA K+ D + + G+KP   T+                            
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  +I+I  Y K+GK+D+A  +   M + G +PD VTY T+I   CK+G +E+A R
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             + M  + L    I  N+++H+LC   K D+A  L+     RG  LD + + ++I  + 
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ +   + KL+D M    + P   TY+ +I G   +GK ++A  +L  ++  GM PD  
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------------ 368
           T+NT+I+G+C   ++E AL    +M      PDI+T NI+L                   
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 369 -----------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                            GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++A  L + +    L PD  TY+ +   L+E G LEE       M E G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 243/462 (52%), Gaps = 2/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+  +YN +L  L  + +  E  +LL  M   G    P+  +Y  +++G+ K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L +A      M     LP+V TY+ +I   C A  +++A  +   M    ++P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N++++ +  SG+  EA   + ++   G++P+ VT+N ++ + CK G+  +A K+  +M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY TL+      G + E   ++D+M R G+  N    + ++     + K+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++ +   ++G   D V+YGT+I    +  +   A++ +++M + ++ P    YN++I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L    K ++A +++ E+L  G+  D   FN+II   C EG+V ++ +  + MV    KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI+T + L+ G C  G +++A K   S +  G   D VTYNTLI+  CK  R+EDA  L 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EME   + PD  TY  I   L ++ R   A++    + E+G
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 235/452 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   P+ + +++LI  +   G +++A  +  +M    L PD VTY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A +  +++ +  + P  + +N +I   C   K DKA +++  M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D + +N++ID++CK G + E+ ++ D+M R G+K + IT +T++   C   K+DEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           MEE     +     +I   L++ G +  A  +
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 197/388 (50%), Gaps = 26/388 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+ I+I   C  G++D     + N+ + GF  D + +  L+   C      +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA- 145

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL--DEVSYG 259
             MD++ R+    G   N  + N +L  LC E +  EA  LL      G     D VSY 
Sbjct: 146 --MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T+I G+F++   ++A   + EM +R I+P+  TY+++I  L ++   ++A+++L  ++++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G++P+  T+N+I+HG+CS GQ ++A+ F  KM     +PD+VT N L+  LC+ G   +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K F S   +G   +  TY TL+     +  L +  GLL  M    + P+ Y ++ +  A
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             + G++++A    S M + G                 ++P +++Y   I   C  GR +
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQG-----------------LNPDTVTYGTVIGILCKSGRVE 426

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGL 527
           DA++ FE+   + ++     Y +L++ L
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSL 454



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 171/343 (49%), Gaps = 24/343 (6%)

Query: 211 MGRKG---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           M R G   +  N  T   ++ + CC  +LD  +  L +  K+G+ +D +++  L+ G   
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 268 DEKANRALKL-WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPD 324
           D++ + A+ +    M +   +P+ F+YN ++ GL    ++++A+++L  +   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             ++ T+I+GF  EG ++KA   +++M+++   P++VT + +++ LC+   ++KA++   
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S +  G   +  TYN+++   C   + ++A G L +M    + PD  TY ++   L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 445 RLEEAQKFTSIMVETG-----KINHQVVQPNTSKTP-------------EEIDPSSISYS 486
           R  EA+K    M + G          ++Q   +K                 I P+   +S
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I  +  QG+   A+ +F + RQ+G+  +  TY  ++  L K
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 117/230 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYNT+++   K  ++ +   L  +M+  G+ P+  TYNI++ G  +   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   +T++ +  ++ TYN++++G C   + +EA R+ + +    L  +  T+N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + GR+ EA  L   L  +G+ P+  T+++M +   ++G +++   +  +MEENG
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + +    N+++    + G++  A   + ++  K   +   T +  L  L
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/549 (29%), Positives = 281/549 (51%), Gaps = 34/549 (6%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGW 60
           +G    PD VTY+T+++   K+G+++   ++L +M  + G+ P+  TY  +V G C+ G 
Sbjct: 37  DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGK 96

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  +V  M      PD +T++ LI GWCNA  ++EA +L KE+ +     D V+ + 
Sbjct: 97  MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSA 156

Query: 121 LINRFFESGRSMEAFKLIDELD--EHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           LI       R  EA++L  E++  E G  KP+ VT+  +I  +CK G ++KA K++  ME
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
                P+ VTY++L+   CKAG++++A  +   M  KG   N +T  T++H LC   K+D
Sbjct: 217 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 276

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A +L++  +      D VSY  L+ GY R  +   A +L+ EM  +  +P   TY  ++
Sbjct: 277 AARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLV 336

Query: 298 WGLSQSGKTEQAIDMLNEL-LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            G   + + E+A  +L  +   +G+ PD  T++ ++ G+    +  +A +F  +M+ ++ 
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P+ VT + L+ GLC+ G +  A++  ++        D VTY  +I  LC   R E+A  
Sbjct: 397 APNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALT 452

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL EM  K++ P   T+ ++  AL   G ++EA K    M   G                
Sbjct: 453 LLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG---------------- 496

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA-------INKSTYMNLMNGLIK 529
            ++P  ++Y+  +      GR + A ++FE  R+K          + +  +  L+ GL K
Sbjct: 497 -LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCK 555

Query: 530 RRKSISKAV 538
            R+ I KA+
Sbjct: 556 ARE-IDKAM 563



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 254/532 (47%), Gaps = 64/532 (12%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGML 96
           ++ + PN  TYN++V+G CK     +A  V+  M   KS+ PD+ TY+ +ING+C  G +
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 97  EEAFRLRKEMESLK-LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + A  + +EM +   + PDVVTY ++++     G+   A +++ E+   G++P+  T + 
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 156 MIKWYCKEGKIDKACKIVRNM--------------------------------------E 177
           +I  +C   K+D+A K+ + +                                      E
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM-GRKGLKMNTITLNTILHTLCCEKKL 236
           +  + PD VTY  LID  CK+GN+E+A +M+ VM GRK +  N +T +++LH LC    L
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDL 240

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+A  L    + +G   + V+Y TLI G     K + A  L DEM        T +YNA+
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA-LQFHNKMVEKS 355
           + G  + G+ E+A  +  E+     +PD  T+  ++ GFC+  ++E+A     N      
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PD+VT +I+++G  R     +A +F +  I +  A ++VTY++LI  LCK  R+  A 
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            +L  +++    PD  TY  +   L  + R EEA      MV                  
Sbjct: 421 EVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVN----------------- 459

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           + ++PS  +++  I   C  G   +A ++       G+     TY  L+ G 
Sbjct: 460 KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 511



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 249/537 (46%), Gaps = 85/537 (15%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY +++D L + GK++   +++ +MK +G+ P++ T++ L++G+C    + EA
Sbjct: 76  GMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 135

Query: 65  MRVV-DLMTQNKSL-------------------------------------PDVWTYNML 86
           +++  +++T +  L                                     PDV TY  L
Sbjct: 136 LKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTAL 195

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           I+G+C +G LE+A ++   ME  K +P+VVTY++L++   ++G   +A  L   +   G 
Sbjct: 196 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 255

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            PN VT+  +I   C   K+D A  ++  M       D V+YN L+D  C+ G +EEA +
Sbjct: 256 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQ 315

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL-NSASKRGYYLDEVSYGTLITGY 265
           +   M  K    + IT   ++   C   +L+EA  LL N  +  G   D V+Y  ++ GY
Sbjct: 316 LFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 375

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R ++   A +   EM  R + P+  TY+++I GL ++G+   A+++L  + +    PD 
Sbjct: 376 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDV 431

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+  +I G C   + E+AL    +MV K  +P + T N ++  LCR G +++A K   +
Sbjct: 432 VTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVA 491

Query: 386 WILKGKAVDSVTYNTL------------------------------------------IS 403
               G     VTY TL                                          I 
Sbjct: 492 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIR 551

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            LCK R ++ A  ++ E+  ++  P      AI   L+ +GR EEA K  + + + G
Sbjct: 552 GLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 197/394 (50%), Gaps = 14/394 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG  C+P+ VTY+++L  L K G L++  DL   M  +G VPN  TY  L+ G C    
Sbjct: 215 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK 274

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  ++D MT      D  +YN L++G+C  G +EEA +L KEM +   LPD +TY  
Sbjct: 275 VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTC 334

Query: 121 LINRFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           L+  F  + R  EA  L++ +    GI P+ VT++I++  Y +  +  +A + ++ M   
Sbjct: 335 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P+ VTY++LID  CKAG +  A  ++  +     K + +T   ++  LC   + +EA
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEA 450

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL     +       ++ ++I    R    + A KL   M    + P   TY  ++ G
Sbjct: 451 LTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG 510

Query: 300 LSQSGKTEQAIDMLNELLQ--------SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
            S++G+ E A ++   + +        + ++P E  F+ +I G C   +++KA+    ++
Sbjct: 511 FSRTGRMEIAYELFEVMRRKAKKSSSAANLVP-EQAFSALIRGLCKAREIDKAMAVVEEL 569

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
             +  +P    C  ++ GL R G  E+A K   S
Sbjct: 570 RSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINS 603


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 269/535 (50%), Gaps = 9/535 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY+T+++ L   G++NE  DL+ +M   G++P   T    +   C +G  ++A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M      P+V+TY  LI+G C +G+L+ A  L   M    + P+ VTYN LIN 
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             E+ R   AF +++ +  +G  PN VT+N MIK YC  G   KA  ++ NM + G S +
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT+I   C +GN   A R++D+M   G K +  +   ++   C   K++ A+ L N
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +EV+Y  LI GY +DEK + A  L + MK     P+  TYN +I GL++  
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A ++   +++ G+ P+  T+  +I G C  G    AL+  NKM+E+   P+++T +
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  L +EG +E+A   F      G   D +TY  +I +     ++E AF  L  M + 
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSI--MVETGKINHQVVQPNT----SKTPEEI 478
              P  +TY  +   L     L + Q+  ++  +V      +Q    +     S    E+
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLAD-QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 479 DPS-SISYSEKINEHCS-QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           DP  S+     +  + S  GR+ +A ++      +G+  ++  Y +L+  L++ R
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 231/453 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY +++    +K  L+    + + M K+G  PN  TY+ L++G C  G + EA  +
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  +  LP   T    I   C+ G  E+A+RL  +M++    P+V TY  LI+    
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG    A  L   +   G+ PN VT+N +I    +  +I  A  ++  M  NG SP+ VT
Sbjct: 368 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT 427

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   C  G+ ++A  +M+ M ++G   N +T NTI+   C       A  +L+   
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   DE SY  LI G+ +  K   A  L++EM +  + P+  TY A+I G  +  K +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L  + +SG  P+  T+N +IHG   +     A +    M+E+   P++VT   ++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G    AL+ F   I +G   + +TY++LI +L +E ++E+A  L +E+E   L 
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           PD  TY  +  A + SG++E A  F   M++ G
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 255/523 (48%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN +++AL K G + +   ++  + +  + P+  TY  ++ G+C+   L  A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V + M +    P+  TY+ LING C++G + EAF L +EM    +LP   T    I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A++L  ++   G +PN  T+  +I   C  G +  A  +   M  +G  P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+   +   ++ AF ++++MGR G   N +T N ++   C      +A +++N
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  +RG+  + V+Y T+I GY        AL++ D M++    P  ++Y  +I G  +  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  + NE++  G+ P+E T+  +I G+C + +++ A      M     +P++ T N
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+ GL ++     A +  +  I +G   + VTY  +I  LCK      A  + ++M E+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY+++  AL + G++EEA+   + +   G I                 P  I+
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI-----------------PDEIT 672

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y + I  +   G+ + A        + G      TY  L+ GL
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 261/538 (48%), Gaps = 38/538 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++  L   G L     L   M + G+ PN  TYN L++   +   
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K A  V++LM +N   P++ TYN +I G+C  G  ++A  +   M       ++VTYNT
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I  + +SG +  A +++D + + G KP+  ++  +I  +CK  K++ A  +   M ++G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  LID  CK   ++ A  +++ M R G + N  T N ++H L  +     A 
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     + G + + V+Y  +I G  ++   + AL+++++M E+  +P+  TY+++I  L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK E+A ++  EL + G+IPDE T+  +I  +   G+VE A  F  +M++   +P +
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS- 419
            T  +L+ GL  E +L            +  A+  V  N    S   +   +DA  ++S 
Sbjct: 706 WTYGVLIKGLKNEYLLADQ---------RLAALPDVVPNC---SFGYQTTDQDAVSVMSA 753

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           ++ E   G       A+ + L  +GR  EA +    M+  G                 + 
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG-----------------LC 796

Query: 480 PSSISYSEKINEHCSQGRYKD---ALQIFEETRQKGIAINKSTYMNLMNGL--IKRRK 532
           P   +Y+  +   CS  R ++   A+ +F+    +G  ++ + Y  L+  L  + RRK
Sbjct: 797 PDQEAYNSLL---CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 228/512 (44%), Gaps = 17/512 (3%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++ +   K  +      L  + + GL      Y+ L+    +LG     M     M    
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P++  YN +IN  C  G + +A  + K++   ++ PD  TY ++I           A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           ++ +++ + G +PN VT++ +I   C  G++++A  ++R M  +G  P   T    I A 
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C  G  E+A+R+   M  KG + N  T   ++  LC    L  A  L +  S+ G + + 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y  LI     + +   A  + + M      P+  TYN MI G    G  ++A+ ++N 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +LQ G   +  T+NTII G+C  G    AL+  + M +   KPD  +   L+ G C+   
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +E A   F   +  G   + VTY  LI   CK+ +L+ A  LL  M+     P+  TY  
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L +      A++   +M+E G                 I P+ ++Y+  I+  C  
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEG-----------------IFPNVVTYTAMIDGLCKN 613

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           G    AL++F +  ++G   N  TY +L+  L
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 221/511 (43%), Gaps = 59/511 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTYN +++ L +  ++     +L+ M + G  PN  TYN ++ GYC LG  K+A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V++ M Q     ++ TYN +I G+C++G    A R+   M      PD  +Y  LI  
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +   AF L +E+ + G+ PN VT+  +I  YCK+ K+D A  ++ +M+ +G  P+
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI    K  N   A  +  VM  +G+  N +T   ++  LC       A  + N
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + ++Y +LI    ++ K   A  L+ E++   ++P   TY  MI     SG
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGF--------------------CSEG----- 339
           K E A + L  ++++G  P   T+  +I G                     CS G     
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744

Query: 340 --------------------QVEKAL--------------QFHNKMVEKSFKPDIVTCNI 365
                               QV+ AL              +    M+ +   PD    N 
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL  L R   ++ A+  F+    +G  V    Y  LI +LC+  R ++A      M  + 
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
             PD    A +   L+  G  +   +F  IM
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 208/488 (42%), Gaps = 59/488 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYN ++      G   +   ++++M ++G   N  TYN ++ GYC  G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R++DLM      PD W+Y  LI G+C    +E AF L  EM    L P+ VTY  LI+ 
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  +   A  L++ +   G +PN  T+N++I    K+     A ++ + M E G  P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  +ID  CK G+   A  M + M  +G   N +T ++++  L  E K++EA  L  
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 245 SASKRGYYLDEVS-----------------------------------YGTLITG----Y 265
              + G   DE++                                   YG LI G    Y
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 266 FRDEKANRALK--------------------LWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              ++   AL                     +  ++ E     S    NA++  LS +G+
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A ++L  ++  G+ PD+  +N+++        V+ A+     M  +  +  +     
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+  LC+    ++A   F + +++    D V    LI  L ++   +     L  ME ++
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 426 LGPDRYTY 433
             P  + Y
Sbjct: 900 YMPSFHIY 907



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 17/272 (6%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI      E   R +   D + +  +    F Y+A++  LS+ G T   +D  + +L  G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+   +N +I+  C +G V  A     K+ E    PD  T   ++ G CR+  L+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           + F     +G   ++VTY+TLI+ LC   R+ +AF L+ EM    + P  +T      AL
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G  E+A +    M   G                  +P+  +Y+  I+  C  G  K 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKG-----------------CEPNVYTYTALISGLCVSGLLKV 373

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A+ +F    + G+  N  TY  L+N L++ R+
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRR 405



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 11/292 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLP+ +TY++++ AL ++GK+ E  +L +++++ GL+P+  TY  ++  Y   G ++ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +  M +    P +WTY +LI G  N  +L +        + L  LPDVV   +   +
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD--------QRLAALPDVVPNCSFGYQ 741

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +          + ELD  G+  +    N ++      G+  +A +++ +M   G  PD
Sbjct: 742 TTDQDAVSVMSAKLAELDP-GL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN+L+ +  +  N++ A  +   M  +G +++      ++  LC   +  EA +   
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           +   R +  D+V    LI G  RD   +  ++    M+ R+ MPS   Y  +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 245/467 (52%), Gaps = 5/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P+++ Y  ++ AL +  ++NE   LL +M   G  P+  T+N ++ G CK G 
Sbjct: 226 MTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGR 285

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++ D M       D      L++G C  G ++EA  +  ++ +    P+ V YNT
Sbjct: 286 IHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNT 341

Query: 121 LINRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LIN +  SGR  EA  L+   +   G +P+A T NIMI   CK+G +  A + +  M + 
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           GF P+ +TY  LID  CK G+ EEA ++++ M  KGL +NT+  N ++  LC + K+ +A
Sbjct: 402 GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDA 461

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +    S +G   D  ++ +LI G  +++K   AL L+ +M    ++ +T TYN +I  
Sbjct: 462 LQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHA 521

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             +    +QA  ++ E+   G   D  T+N +I   C  G  EK L    +M  +   P 
Sbjct: 522 FLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPS 581

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I +CNIL++  CR G +  AL+F R  I +G   D VTYN+LI+ LCK  R ++A  L +
Sbjct: 582 INSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN 641

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
            ++ K + PD  TY  + +     G   +A +     V  G I +++
Sbjct: 642 GLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEI 688



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 258/526 (49%), Gaps = 22/526 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+  ++ A     +++    LL DM K G VPN   Y +L+    +   + EA
Sbjct: 195 GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEA 254

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M++++ M      PDV T+N +I+G C AG + EA +L   M       D +    L++ 
Sbjct: 255 MKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV-RNMEENGFSP 183
               G+  EA  ++ ++      PN V +N +I  Y   G+ ++A  ++ +NM   GF P
Sbjct: 315 LCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T+N +ID  CK G +  A   +D M +KG + N IT   ++   C +   +EA  ++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           NS S +G  L+ V Y  LI    +D K   AL+++ EM  +   P  +T+N++I+GL ++
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K E+A+ +  ++L  G+I +  T+NT+IH F     +++A +   +M  +    D +T 
Sbjct: 491 DKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITY 550

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+  LC+ G  EK L        +       + N LI+S C+  ++ DA   L +M +
Sbjct: 551 NGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQ 610

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + L PD  TY ++   L + GR +EA    + +   G                 I P ++
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG-----------------IHPDAV 653

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +Y+  I+ +C +G + DA Q+  +    G   N+ T+  L+N  +K
Sbjct: 654 TYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 250/531 (47%), Gaps = 31/531 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYN----ILVSGYCKLG 59
           GC+     +  I+    K G   +   LL DM       P   +YN    ILV+G C   
Sbjct: 124 GCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCP-- 181

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
             K A  V   M      P V+T+ +++  +C    ++ A  L ++M     +P+ + Y 
Sbjct: 182 --KVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQ 239

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI+   E+ R  EA KL++E+   G +P+  T N +I   CK G+I +A K+   M   
Sbjct: 240 MLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLR 299

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            F+ D +    L+   C+ G ++EA  M+  +       NT+  NT+++      + +EA
Sbjct: 300 DFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNP----NTVLYNTLINGYVVSGRFEEA 355

Query: 240 Y-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
             +L  +    G+  D  ++  +I G  +      AL+  DEM ++   P+  TY  +I 
Sbjct: 356 KDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILID 415

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  + G  E+A  ++N +   G+  +   +N +I   C +G+++ ALQ + +M  K  KP
Sbjct: 416 GFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKP 475

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI T N L+ GLC+   +E+AL  +R  +L+G   ++VTYNTLI +  +   ++ A  L+
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM  +    D  TY  +  AL ++G  E+       M                   EEI
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG-----------------EEI 578

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            PS  S +  IN  C  G+  DALQ   +  Q+G+  +  TY +L+NGL K
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 70/331 (21%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N ++D L KKG L    + L +M K+G  PN  TY IL+ G+CK G  +EA +V
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 68  VDLMT-QNKSL----------------------------------PDVWTYNMLINGWCN 92
           V+ M+ +  SL                                  PD++T+N LI G C 
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG------- 145
              +EEA  L ++M    ++ + VTYNTLI+ F       +A KL+ E+   G       
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549

Query: 146 ----------------------------IKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
                                       I P+  + NI+I  +C+ GK++ A + +R+M 
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G +PD VTYN+LI+  CK G  +EA  + + +  KG+  + +T NT++   C E   +
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           +A  LL      G+  +E+++  LI  + ++
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKN 700



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 184/418 (44%), Gaps = 23/418 (5%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            Y  LI++    G      KL+ ++ + G         +++++Y K G   +A +++ +M
Sbjct: 96  VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155

Query: 177 -EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
                F P   +YN +++        + A  +   M  +G+     T   ++   C   +
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D A  LL   +K G   + + Y  LI     + + N A+KL +EM      P   T+N 
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL ++G+  +A  + + +L      D      ++HG C  G+V++A      M+ K 
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKI 331

Query: 356 FKPDIVTCNILLSGLCREGILEKALKF-FRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             P+ V  N L++G    G  E+A    +++ ++ G   D+ T+N +I  LCK+  L  A
Sbjct: 332 PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSA 391

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
              L EM +K   P+  TY  +     + G  EEA K  + M   G              
Sbjct: 392 LEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG-------------- 437

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              +  +++ Y+  I   C  G+ +DALQ++ E   KG   +  T+ +L+ GL K  K
Sbjct: 438 ---LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 122/243 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  T+N+++  L K  K+ E   L  DM  +G++ N  TYN L+  + +L  
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A ++V  M       D  TYN LI   C  G  E+   L ++M   ++ P + + N 
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F  +G+  +A + + ++ + G+ P+ VT+N +I   CK G+  +A  +   ++  G
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTLI   C  G   +A +++      G   N IT + +++         E +
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQF 707

Query: 241 MLL 243
            +L
Sbjct: 708 TIL 710


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 269/535 (50%), Gaps = 9/535 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY+T+++ L   G++NE  DL+ +M   G++P   T    +   C +G  ++A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M      P+V+TY  LI+G C +G+L+ A  L   M    + P+ VTYN LIN 
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             E+ R   AF +++ +  +G  PN VT+N MIK YC  G   KA  ++ NM + G S +
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT+I   C +GN   A R++D+M   G K +  +   ++   C   K++ A+ L N
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +EV+Y  LI GY +DEK + A  L + MK     P+  TYN +I GL++  
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A ++   +++ G+ P+  T+  +I G C  G    AL+  NKM+E+   P+++T +
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  L +EG +E+A   F      G   D +TY  +I +     ++E AF  L  M + 
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSI--MVETGKINHQVVQPNT----SKTPEEI 478
              P  +TY  +   L     L + Q+  ++  +V      +Q    +     S    E+
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLAD-QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 479 DPS-SISYSEKINEHCS-QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           DP  S+     +  + S  GR+ +A ++      +G+  ++  Y +L+  L++ R
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 231/453 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY +++    +K  L+    + + M K+G  PN  TY+ L++G C  G + EA  +
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  +  LP   T    I   C+ G  E+A+RL  +M++    P+V TY  LI+    
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG    A  L   +   G+ PN VT+N +I    +  +I  A  ++  M  NG SP+ VT
Sbjct: 368 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT 427

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   C  G+ ++A  +M+ M ++G   N +T NTI+   C       A  +L+   
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   DE SY  LI G+ +  K   A  L++EM +  + P+  TY A+I G  +  K +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L  + +SG  P+  T+N +IHG   +     A +    M+E+   P++VT   ++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G    AL+ F   I +G   + +TY++LI +L +E ++E+A  L +E+E   L 
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           PD  TY  +  A + SG++E A  F   M++ G
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 255/523 (48%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN +++AL K G + +   ++  + +  + P+  TY  ++ G+C+   L  A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V + M +    P+  TY+ LING C++G + EAF L +EM    +LP   T    I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A++L  ++   G +PN  T+  +I   C  G +  A  +   M  +G  P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+   +   ++ AF ++++MGR G   N +T N ++   C      +A +++N
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  +RG+  + V+Y T+I GY        AL++ D M++    P  ++Y  +I G  +  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  + NE++  G+ P+E T+  +I G+C + +++ A      M     +P++ T N
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+ GL ++     A +  +  I +G   + VTY  +I  LCK      A  + ++M E+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY+++  AL + G++EEA+   + +   G I                 P  I+
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI-----------------PDEIT 672

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y + I  +   G+ + A        + G      TY  L+ GL
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 261/538 (48%), Gaps = 38/538 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++  L   G L     L   M + G+ PN  TYN L++   +   
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K A  V++LM +N   P++ TYN +I G+C  G  ++A  +   M       ++VTYNT
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I  + +SG +  A +++D + + G KP+  ++  +I  +CK  K++ A  +   M ++G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  LID  CK   ++ A  +++ M R G + N  T N ++H L  +     A 
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     + G + + V+Y  +I G  ++   + AL+++++M E+  +P+  TY+++I  L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK E+A ++  EL + G+IPDE T+  +I  +   G+VE A  F  +M++   +P +
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS- 419
            T  +L+ GL  E +L            +  A+  V  N    S   +   +DA  ++S 
Sbjct: 706 WTYGVLIKGLKNEYLLADQ---------RLAALPDVVPNC---SFGYQTTDQDAVSVMSA 753

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           ++ E   G       A+ + L  +GR  EA +    M+  G                 + 
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG-----------------LC 796

Query: 480 PSSISYSEKINEHCSQGRYKD---ALQIFEETRQKGIAINKSTYMNLMNGL--IKRRK 532
           P   +Y+  +   CS  R ++   A+ +F+    +G  ++ + Y  L+  L  + RRK
Sbjct: 797 PDQEAYNSLL---CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 228/512 (44%), Gaps = 17/512 (3%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++ +   K  +      L  + + GL      Y+ L+    +LG     M     M    
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P++  YN +IN  C  G + +A  + K++   ++ PD  TY ++I           A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           ++ +++ + G +PN VT++ +I   C  G++++A  ++R M  +G  P   T    I A 
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C  G  E+A+R+   M  KG + N  T   ++  LC    L  A  L +  S+ G + + 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y  LI     + +   A  + + M      P+  TYN MI G    G  ++A+ ++N 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +LQ G   +  T+NTII G+C  G    AL+  + M +   KPD  +   L+ G C+   
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +E A   F   +  G   + VTY  LI   CK+ +L+ A  LL  M+     P+  TY  
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L +      A++   +M+E G                 I P+ ++Y+  I+  C  
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEG-----------------IFPNVVTYTAMIDGLCKN 613

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           G    AL++F +  ++G   N  TY +L+  L
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 221/511 (43%), Gaps = 59/511 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTYN +++ L +  ++     +L+ M + G  PN  TYN ++ GYC LG  K+A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V++ M Q     ++ TYN +I G+C++G    A R+   M      PD  +Y  LI  
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +   AF L +E+ + G+ PN VT+  +I  YCK+ K+D A  ++ +M+ +G  P+
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI    K  N   A  +  VM  +G+  N +T   ++  LC       A  + N
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + ++Y +LI    ++ K   A  L+ E++   ++P   TY  MI     SG
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGF--------------------CSEG----- 339
           K E A + L  ++++G  P   T+  +I G                     CS G     
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744

Query: 340 --------------------QVEKAL--------------QFHNKMVEKSFKPDIVTCNI 365
                               QV+ AL              +    M+ +   PD    N 
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL  L R   ++ A+  F+    +G  V    Y  LI +LC+  R ++A      M  + 
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
             PD    A +   L+  G  +   +F  IM
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 209/491 (42%), Gaps = 59/491 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYN ++      G   +   ++++M ++G   N  TYN ++ GYC  G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R++DLM      PD W+Y  LI G+C    +E AF L  EM    L P+ VTY  LI+ 
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  +   A  L++ +   G +PN  T+N++I    K+     A ++ + M E G  P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  +ID  CK G+   A  M + M  +G   N +T ++++  L  E K++EA  L  
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 245 SASKRGYYLDEVS-----------------------------------YGTLITG----Y 265
              + G   DE++                                   YG LI G    Y
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 266 FRDEKANRALK--------------------LWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              ++   AL                     +  ++ E     S    NA++  LS +G+
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A ++L  ++  G+ PD+  +N+++        V+ A+     M  +  +  +     
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+  LC+    ++A   F + +++    D V    LI  L ++   +     L  ME ++
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 426 LGPDRYTYAAI 436
             P  + Y  +
Sbjct: 900 YMPSFHIYTIL 910



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 17/272 (6%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI      E   R +   D + +  +    F Y+A++  LS+ G T   +D  + +L  G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+   +N +I+  C +G V  A     K+ E    PD  T   ++ G CR+  L+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           + F     +G   ++VTY+TLI+ LC   R+ +AF L+ EM    + P  +T      AL
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G  E+A +    M   G                  +P+  +Y+  I+  C  G  K 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKG-----------------CEPNVYTYTALISGLCVSGLLKV 373

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A+ +F    + G+  N  TY  L+N L++ R+
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRR 405


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 269/535 (50%), Gaps = 9/535 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY+T+++ L   G++NE  DL+ +M   G++P   T    +   C +G  ++A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M      P+V+TY  LI+G C +G+L+ A  L   M    + P+ VTYN LIN 
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             E+ R   AF +++ +  +G  PN VT+N MIK YC  G   KA  ++ NM + G S +
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT+I   C +GN   A R++D+M   G K +  +   ++   C   K++ A+ L N
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +EV+Y  LI GY +DEK + A  L + MK     P+  TYN +I GL++  
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A ++   +++ G+ P+  T+  +I G C  G    AL+  NKM+E+   P+++T +
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  L +EG +E+A   F      G   D +TY  +I +     ++E AF  L  M + 
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSI--MVETGKINHQVVQPNT----SKTPEEI 478
              P  +TY  +   L     L + Q+  ++  +V      +Q    +     S    E+
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLAD-QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 479 DPS-SISYSEKINEHCS-QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           DP  S+     +  + S  GR+ +A ++      +G+  ++  Y +L+  L++ R
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 231/453 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY +++    +K  L+    + + M K+G  PN  TY+ L++G C  G + EA  +
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  +  LP   T    I   C+ G  E+A+RL  +M++    P+V TY  LI+    
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG    A  L   +   G+ PN VT+N +I    +  +I  A  ++  M  NG SP+ VT
Sbjct: 368 SGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT 427

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   C  G+ ++A  +M+ M ++G   N +T NTI+   C       A  +L+   
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   DE SY  LI G+ +  K   A  L++EM +  + P+  TY A+I G  +  K +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L  + +SG  P+  T+N +IHG   +     A +    M+E+   P++VT   ++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G    AL+ F   I +G   + +TY++LI +L +E ++E+A  L +E+E   L 
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           PD  TY  +  A + SG++E A  F   M++ G
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 255/523 (48%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN +++AL K G + +   ++  + +  + P+  TY  ++ G+C+   L  A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V + M +    P+  TY+ LING C++G + EAF L +EM    +LP   T    I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A++L  ++   G +PN  T+  +I   C  G +  A  +   M  +G  P+
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+   +   ++ AF ++++MGR G   N +T N ++   C      +A +++N
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  +RG+  + V+Y T+I GY        AL++ D M++    P  ++Y  +I G  +  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  + NE++  G+ P+E T+  +I G+C + +++ A      M     +P++ T N
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+ GL ++     A +  +  I +G   + VTY  +I  LCK      A  + ++M E+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY+++  AL + G++EEA+   + +   G I                 P  I+
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI-----------------PDEIT 672

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y + I  +   G+ + A        + G      TY  L+ GL
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 261/538 (48%), Gaps = 38/538 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++  L   G L     L   M + G+ PN  TYN L++   +   
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K A  V++LM +N   P++ TYN +I G+C  G  ++A  +   M       ++VTYNT
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I  + +SG +  A +++D + + G KP+  ++  +I  +CK  K++ A  +   M ++G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  LID  CK   ++ A  +++ M R G + N  T N ++H L  +     A 
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     + G + + V+Y  +I G  ++   + AL+++++M E+  +P+  TY+++I  L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK E+A ++  EL + G+IPDE T+  +I  +   G+VE A  F  +M++   +P +
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS- 419
            T  +L+ GL  E +L            +  A+  V  N    S   +   +DA  ++S 
Sbjct: 706 WTYGVLIKGLKNEYLLADQ---------RLAALPDVVPNC---SFGYQTTDQDAVSVMSA 753

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           ++ E   G       A+ + L  +GR  EA +    M+  G                 + 
Sbjct: 754 KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG-----------------LC 796

Query: 480 PSSISYSEKINEHCSQGRYKD---ALQIFEETRQKGIAINKSTYMNLMNGL--IKRRK 532
           P   +Y+  +   CS  R ++   A+ +F+    +G  ++ + Y  L+  L  + RRK
Sbjct: 797 PDQEAYNSLL---CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 228/512 (44%), Gaps = 17/512 (3%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++ +   K  +      L  + + GL      Y+ L+    +LG     M     M    
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P++  YN +IN  C  G + +A  + K++   ++ PD  TY ++I           A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           ++ +++ + G +PN VT++ +I   C  G++++A  ++R M  +G  P   T    I A 
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C  G  E+A+R+   M  KG + N  T   ++  LC    L  A  L +  S+ G + + 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y  LI     + +   A  + + M      P+  TYN MI G    G  ++A+ ++N 
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +LQ G   +  T+NTII G+C  G    AL+  + M +   KPD  +   L+ G C+   
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +E A   F   +  G   + VTY  LI   CK+ +L+ A  LL  M+     P+  TY  
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L +      A++   +M+E G                 I P+ ++Y+  I+  C  
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEG-----------------IFPNVVTYTAMIDGLCKN 613

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           G    AL++F +  ++G   N  TY +L+  L
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 221/511 (43%), Gaps = 59/511 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTYN +++ L +  ++     +L+ M + G  PN  TYN ++ GYC LG  K+A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V++ M Q     ++ TYN +I G+C++G    A R+   M      PD  +Y  LI  
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +   AF L +E+ + G+ PN VT+  +I  YCK+ K+D A  ++ +M+ +G  P+
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI    K  N   A  +  VM  +G+  N +T   ++  LC       A  + N
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + ++Y +LI    ++ K   A  L+ E++   ++P   TY  MI     SG
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGF--------------------CSEG----- 339
           K E A + L  ++++G  P   T+  +I G                     CS G     
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744

Query: 340 --------------------QVEKAL--------------QFHNKMVEKSFKPDIVTCNI 365
                               QV+ AL              +    M+ +   PD    N 
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL  L R   ++ A+  F+    +G  V    Y  LI +LC+  R ++A      M  + 
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
             PD    A +   L+  G  +   +F  IM
Sbjct: 865 WNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 208/488 (42%), Gaps = 59/488 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYN ++      G   +   ++++M ++G   N  TYN ++ GYC  G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R++DLM      PD W+Y  LI G+C    +E AF L  EM    L P+ VTY  LI+ 
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  +   A  L++ +   G +PN  T+N++I    K+     A ++ + M E G  P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  +ID  CK G+   A  M + M  +G   N +T ++++  L  E K++EA  L  
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 245 SASKRGYYLDEVS-----------------------------------YGTLITG----Y 265
              + G   DE++                                   YG LI G    Y
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 266 FRDEKANRALK--------------------LWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              ++   AL                     +  ++ E     S    NA++  LS +G+
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A ++L  ++  G+ PD+  +N+++        V+ A+     M  +  +  +     
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+  LC+    ++A   F + +++    D V    LI  L ++   +     L  ME ++
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 426 LGPDRYTY 433
             P  + Y
Sbjct: 900 YMPSFHIY 907



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 17/272 (6%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI      E   R +   D + +  +    F Y+A++  LS+ G T   +D  + +L  G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+   +N +I+  C +G V  A     K+ E    PD  T   ++ G CR+  L+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           + F     +G   ++VTY+TLI+ LC   R+ +AF L+ EM    + P  +T      AL
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G  E+A +    M   G                  +P+  +Y+  I+  C  G  K 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKG-----------------CEPNVYTYTALISGLCVSGILKV 373

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A+ +F    + G+  N  TY  L+N L++ R+
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRR 405



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 11/292 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLP+ +TY++++ AL ++GK+ E  +L +++++ GL+P+  TY  ++  Y   G ++ A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +  M +    P +WTY +LI G  N  +L +        + L  LPDVV   +   +
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD--------QRLAALPDVVPNCSFGYQ 741

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +          + ELD  G+  +    N ++      G+  +A +++ +M   G  PD
Sbjct: 742 TTDQDAVSVMSAKLAELDP-GL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN+L+ +  +  N++ A  +   M  +G +++      ++  LC   +  EA +   
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           +   R +  D+V    LI G  RD   +  ++    M+ R+ MPS   Y  +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 248/465 (53%), Gaps = 3/465 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G +PD  T+ T++    ++G L+    +   M + G   +  + N++V G+CK G 
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274

Query: 61  LKEAMRVVDLMT-QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +++A+  +  M+ Q+   PD +T+N L+NG C AG ++ A  +   M      PDV TYN
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++I+   + G   EA +++D++      PN VT+N +I   CKE ++++A ++ R +   
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  T+N+LI   C   N   A  + + M  KG + +  T N ++ +LC + KLDEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L      G     ++Y TLI G+ +  K   A +++DEM+   +  ++ TYN +I G
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +S + E A  ++++++  G  PD+ T+N+++  FC  G ++KA      M     +PD
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           IVT   L+SGLC+ G +E A K  RS  +KG  +    YN +I  L ++R+  +A  L  
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634

Query: 420 EM-EEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           EM E+ +  PD  +Y  +   L    G + EA  F   ++E G +
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 270/549 (49%), Gaps = 21/549 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  PD   YN +L+ L     L  V    + M   G+ P+ +T+N+L+   C+   
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A+ +++ M     +PD  T+  ++ G+   G L+ A R+R++M         V+ N 
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264

Query: 121 LINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +++ F + GR  +A   I E+ ++ G  P+  T N ++   CK G +  A +I+  M + 
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G+ PD  TYN++I   CK G ++EA  ++D M  +    NT+T NT++ TLC E +++EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L    + +G   D  ++ +LI G         A++L++EM+ +   P  FTYN +I  
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L   GK ++A++ML ++  SG      T+NT+I GFC   +  +A +  ++M       +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+ GLC+   +E A +     I++G+  D  TYN+L++  C+   ++ A  ++ 
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT-SIMVETGKINHQVVQP------NTS 472
            M      PD  TY  + + L ++GR+E A K   SI ++   +      P         
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624

Query: 473 KTPEEID------------PSSISYSEKINEHCS-QGRYKDALQIFEETRQKGIAINKST 519
           KT E I+            P ++SY       C+  G  ++A+    E  +KG     S+
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSS 684

Query: 520 YMNLMNGLI 528
              L  GL+
Sbjct: 685 LYMLAEGLL 693



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 261/549 (47%), Gaps = 26/549 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+   Y  IL  L + G  ++++ +L DMK        +T+ IL+  Y +     E + V
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 68  VDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           VD M     L PD   YN ++N   +   L+       +M    + PDV T+N LI    
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            + +   A  +++++  +G+ P+  T   +++ Y +EG +D A +I   M E G S   V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           + N ++   CK G +E+A   +  M  + G   +  T NT+++ LC    +  A  +++ 
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + GY  D  +Y ++I+G  +  +   A+++ D+M  R   P+T TYN +I  L +  +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A ++   L   G++PD  TFN++I G C       A++   +M  K  +PD  T N+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+  LC +G L++AL   +   L G A   +TYNTLI   CK  +  +A  +  EME   
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----------INH----------- 464
           +  +  TY  +   L +S R+E+A +    M+  G+          + H           
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            +VQ  TS   E   P  ++Y   I+  C  GR + A ++    + KGI +    Y  ++
Sbjct: 561 DIVQAMTSNGCE---PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617

Query: 525 NGLIKRRKS 533
            GL ++RK+
Sbjct: 618 QGLFRKRKT 626



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 229/451 (50%), Gaps = 39/451 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+NT+++ L K G +    +++  M ++G  P+  TYN ++SG CKLG +KEA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+D M      P+  TYN LI+  C    +EEA  L + + S  +LPDV T+N+LI  
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +     A +L +E+   G +P+  T+N++I   C +GK+D+A  +++ ME +G +  
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTLID  CKA    EA  + D M   G+  N++T NT++  LC  +++++A  L++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529

Query: 245 -----------------------------------SASKRGYYLDEVSYGTLITGYFRDE 269
                                              + +  G   D V+YGTLI+G  +  
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTF 328
           +   A KL   ++ + I  +   YN +I GL +  KT +AI++  E+L Q+   PD  ++
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649

Query: 329 NTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
             +  G C+ G  + +A+ F  +++EK F P+  +  +L  GL    + E  +K     +
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            K +  +     +++  L K R+ +DA   L
Sbjct: 710 QKARFSEEEV--SMVKGLLKIRKFQDALATL 738



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 127/332 (38%), Gaps = 90/332 (27%)

Query: 274 ALKLWD-EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           AL+L++   K+    P    Y  ++  L +SG  +    +L ++  S      +TF  +I
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125

Query: 333 HGFCS----------------EGQVEKALQFHNKM------------VEKS--------F 356
             +                  E  ++    F+N+M            VE S         
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185

Query: 357 KPDIVTCNILLSGLCR-----------------------------------EGILEKALK 381
           KPD+ T N+L+  LCR                                   EG L+ AL+
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTAL 440
                +  G +  +V+ N ++   CKE R+EDA   + EM  +    PD+YT+  +   L
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++G ++ A +   +M++ G                  DP   +Y+  I+  C  G  K+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEG-----------------YDPDVYTYNSVISGLCKLGEVKE 348

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A+++ ++   +  + N  TY  L++ L K  +
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 276/531 (51%), Gaps = 20/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ +    G+L+     L ++ K+G   +   +  L+ G C      +AM +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   MTQ   +P+V++YN+L+ G C+    +EA  L + M  +     PDVV+Y T+IN 
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A+    E+ + GI PN VT++ +I   CK   +DKA +++ +M +NG  P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+++   C +G  +EA   +  M   G++ + +T N+++  LC   +  EA  + +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S +KRG   +  +YGTL+ GY           L D M    I P+ + ++ +I   ++ G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +QA+ + +++ Q G+ PD  T+ T+I   C  G+VE A+++  +M+++   P  +  N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC     +KA +     + +G  +D++ +N++I S CKE R+ ++  L   M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  TY+ +      +G+++EA K  + MV  G                 + P  ++
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG-----------------MKPDCVT 551

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           Y+  IN +C   R +DAL +F E    G++ +  TY  ++ GL + R++ +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602



 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 265/529 (50%), Gaps = 70/529 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y T+++  FK+G L++      +M  +G++PN  TY+ +++  CK   +
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +AM V+  M +N  +P+  TYN +++G+C++G  +EA    K+M S  + PDVVTYN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           ++   ++GR  EA K+ D + + G+KP   T+                            
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  +I+I  Y K+GK+D+A  +   M + G +PD VTY T+I   CK+G +E+A R
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             + M  + L    I  N+++H+LC   K D+A  L+     RG  LD + + ++I  + 
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ +   + KL+D M    + P   TY+ +I G   +GK ++A  +L  ++  GM PD  
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------------ 368
           T+NT+I+G+C   ++E AL    +M      PDI+T NI+L                   
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 369 -----------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                            GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++A  L + +    L PD  TY+ +   L+E G LEE       M E G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 243/462 (52%), Gaps = 2/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+  +YN +L  L  + +  E  +LL  M   G    P+  +Y  +++G+ K 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L +A      M     LP+V TY+ +I   C A  +++A  +   M    ++P+  TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N++++ +  SG+  EA   + ++   G++P+ VT+N ++ + CK G+  +A K+  +M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY TL+      G + E   ++D+M R G+  N    + ++     + K+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++ +   ++G   D V+YGT+I    +  +   A++ +++M + ++ P    YN++I 
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L    K ++A +++ E+L  G+  D   FN+II   C EG+V ++ +  + MV    KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI+T + L+ G C  G +++A K   S +  G   D VTYNTLI+  CK  R+EDA  L 
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EME   + PD  TY  I   L ++ R   A++    + E+G
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 235/452 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   P+ + +++LI  +   G +++A  +  +M    L PD VTY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A +  +++ +  + P  + +N +I   C   K DKA +++  M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D + +N++ID++CK G + E+ ++ D+M R G+K + IT +T++   C   K+DEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           MEE     +     +I   L++ G +  A  +
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 197/388 (50%), Gaps = 26/388 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+ I+I   C  G++D     + N+ + GF  D + +  L+   C      +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA- 145

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL--DEVSYG 259
             MD++ R+    G   N  + N +L  LC E +  EA  LL      G     D VSY 
Sbjct: 146 --MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T+I G+F++   ++A   + EM +R I+P+  TY+++I  L ++   ++A+++L  ++++
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G++P+  T+N+I+HG+CS GQ ++A+ F  KM     +PD+VT N L+  LC+ G   +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K F S   +G   +  TY TL+     +  L +  GLL  M    + P+ Y ++ +  A
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             + G++++A    S M + G                 ++P +++Y   I   C  GR +
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQG-----------------LNPDTVTYGTVIGILCKSGRVE 426

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGL 527
           DA++ FE+   + ++     Y +L++ L
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSL 454



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 171/343 (49%), Gaps = 24/343 (6%)

Query: 211 MGRKG---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           M R G   +  N  T   ++ + CC  +LD  +  L +  K+G+ +D +++  L+ G   
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 268 DEKANRALKL-WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPD 324
           D++ + A+ +    M +   +P+ F+YN ++ GL    ++++A+++L  +   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             ++ T+I+GF  EG ++KA   +++M+++   P++VT + +++ LC+   ++KA++   
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S +  G   +  TYN+++   C   + ++A G L +M    + PD  TY ++   L ++G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 445 RLEEAQKFTSIMVETG-----KINHQVVQPNTSKTP-------------EEIDPSSISYS 486
           R  EA+K    M + G          ++Q   +K                 I P+   +S
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I  +  QG+   A+ +F + RQ+G+  +  TY  ++  L K
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 117/230 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYNT+++   K  ++ +   L  +M+  G+ P+  TYNI++ G  +   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   +T++ +  ++ TYN++++G C   + +EA R+ + +    L  +  T+N 
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + GR+ EA  L   L  +G+ P+  T+++M +   ++G +++   +  +MEENG
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + +    N+++    + G++  A   + ++  K   +   T +  L  L
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 275/532 (51%), Gaps = 21/532 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++    + G+L+     L ++ K+G   +   +  L+ G C      +AM +
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +P+V++YN+L+ G C+    +EA  L   M   +     PDVV+Y T+IN
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G S +A+    E+ + GI P+ VT+N +I   CK   +DKA +++  M +NG  P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           DC+TYN+++   C +G  +EA   +  M   G++ + +T + ++  LC   +  EA  + 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S +KRG   +  +YGTL+ GY           L D M    I P  + ++ +I   ++ 
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK +QA+ + +++ Q G+ P+  T+  +I   C  G+VE A+ +  +M+++   P  +  
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC     E+A +     + +G  ++++ +N++I S CKE R+ ++  L   M  
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + P+  TY  +      +G+++EA K  S MV  G                 + P+++
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-----------------LKPNTV 547

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +YS  IN +C   R +DAL +F+E    G++ +  TY  ++ GL + R++ +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 269/533 (50%), Gaps = 18/533 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD VTYN+I+ AL K   +++  ++L+ M K G++P+  TYN ++ GYC  G  KEA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +  +  M  +   PDV TY++L++  C  G   EA ++   M    L P++ TY TL+  
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G  +E   L+D +  +GI P+    +I+I  Y K+GK+D+A  +   M + G +P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  +I   CK+G +E+A    + M  +GL    I  N+++H LC   K + A  L+ 
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG  L+ + + ++I  + ++ +   + KL++ M    + P+  TYN +I G   +G
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A+ +L+ ++  G+ P+  T++T+I+G+C   ++E AL    +M      PDI+T N
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+L GL +      A + +      G  ++  TYN ++  LCK +  +DA  +   +   
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  +  T+  +  AL++ GR +EA+         G +                 P+  +
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV-----------------PNYWT 688

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           Y         QG  ++  Q+F      G  ++ S  +N +   + +R  I++A
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVD-SGMLNFIVRELLQRGEITRA 740



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 272/532 (51%), Gaps = 20/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC+P+  +YN +L  L  + +  E  +LL   +D +  G  P+  +Y  +++G+ K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G   +A      M     LPDV TYN +I   C A  +++A  +   M    ++PD +T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN++++ +  SG+  EA   + ++   G++P+ VT+++++ + CK G+  +A KI  +M 
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  P+  TY TL+      G + E   ++D+M R G+  +    + ++     + K+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A ++ +   ++G   + V+YG +I    +  +   A+  +++M +  + P    YN++I
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL    K E+A +++ E+L  G+  +   FN+II   C EG+V ++ +    MV    K
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+++T N L++G C  G +++A+K     +  G   ++VTY+TLI+  CK  R+EDA  L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             EME   + PD  TY  I   L ++ R   A++    + E+G                +
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT---------------Q 613

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+ S  +Y+  ++  C      DALQ+F+      + +   T+  +++ L+K
Sbjct: 614 IELS--TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 235/458 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY+ ++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   PD + +++LI  +   G +++A  +  +M    L P+ VTY  
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A    +++ + G+ P  + +N +I   C   K ++A +++  M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + +N++ID++CK G + E+ ++ ++M R G+K N IT NT+++  C   K+DEA 
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   + V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     + ALQ    +     K + 
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F ++   G   +  TY  +  ++  +  LE+   L   
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           ME+     D      I   L++ G +  A  + S++ E
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 190/385 (49%), Gaps = 56/385 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
           +PD  TY  LI   C+AG ++  F  +  + +KG +++ I    +L  LC +K+  +A  
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143

Query: 241 ------------------------------------MLLNSASKR--GYYLDEVSYGTLI 262
                                               +L   A  R  G   D VSY T+I
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+F++  +++A   + EM +R I+P   TYN++I  L ++   ++A+++LN ++++G++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+N+I+HG+CS GQ ++A+ F  KM     +PD+VT ++L+  LC+ G   +A K 
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F S   +G   +  TY TL+     +  L +  GLL  M    + PD Y ++ +  A  +
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++++A    S M + G                 ++P++++Y   I   C  GR +DA+
Sbjct: 384 QGKVDQAMLVFSKMRQQG-----------------LNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 503 QIFEETRQKGIAINKSTYMNLMNGL 527
             FE+   +G++     Y +L++GL
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGL 451



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 35/265 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYNT+++     GK++E   LLS M   GL PN  TY+ L++GYCK+  
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI--------------------------------- 87
           +++A+ +   M  +   PD+ TYN+++                                 
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621

Query: 88  --NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
             +G C   + ++A ++ + +  + L  +  T+N +I+   + GR+ EA  L      +G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+ +M +    +G +++  ++  +ME+NG + D    N ++    + G +  A 
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741

Query: 206 RMMDVMGRKGLKMNTITLNTILHTL 230
             + ++  K   +   T +  +  L
Sbjct: 742 TYLSMIDEKHFSLEASTASLFIDLL 766


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 274/532 (51%), Gaps = 21/532 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++    + G+L+     L ++ K+G   +   +  L+ G C      +AM +
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +P+V++YN+L+ G C+    +EA  L   M   +     PDVV+Y T+IN
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G S +A+    E+ + GI P+ VT+N +I   CK   +DKA +++  M +NG  P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           DC+TYN+++   C +G  +EA   +  M   G++ + +T + ++  LC   +  EA  + 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S +KRG   +  +YGTL+ GY           L D M    I P  + ++ +I   +  
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK +QA+ + +++ Q G+ P+  T+  +I   C  G+VE A+ +  +M+++   P  +  
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC     E+A +     + +G  ++++ +N++I S CKE R+ ++  L   M  
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + P+  TY  +      +G+++EA K  S MV  G                 + P+++
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-----------------LKPNTV 547

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +YS  IN +C   R +DAL +F+E    G++ +  TY  ++ GL + R++ +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 272/532 (51%), Gaps = 20/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC+P+  +YN +L  L  + +  E  +LL   +D +  G  P+  +Y  +++G+ K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G   +A      M     LPDV TYN +I   C A  +++A  +   M    ++PD +T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN++++ +  SG+  EA   + ++   G++P+ VT+++++ + CK G+  +A KI  +M 
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  P+  TY TL+      G + E   ++D+M R G+  +    + ++     + K+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVD 388

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A ++ +   ++G   + V+YG +I    +  +   A+  +++M +  + P    YN++I
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL    K E+A +++ E+L  G+  +   FN+II   C EG+V ++ +    MV    K
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+++T N L++G C  G +++A+K     +  G   ++VTY+TLI+  CK  R+EDA  L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             EME   + PD  TY  I   L ++ R   A++    + E+G                +
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT---------------Q 613

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+ S  +Y+  ++  C      DALQ+F+      + +   T+  +++ L+K
Sbjct: 614 IELS--TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 268/533 (50%), Gaps = 18/533 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD VTYN+I+ AL K   +++  ++L+ M K G++P+  TYN ++ GYC  G  KEA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +  +  M  +   PDV TY++L++  C  G   EA ++   M    L P++ TY TL+  
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G  +E   L+D +  +GI P+    +I+I  Y  +GK+D+A  +   M + G +P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPN 405

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  +I   CK+G +E+A    + M  +GL    I  N+++H LC   K + A  L+ 
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG  L+ + + ++I  + ++ +   + KL++ M    + P+  TYN +I G   +G
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A+ +L+ ++  G+ P+  T++T+I+G+C   ++E AL    +M      PDI+T N
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+L GL +      A + +      G  ++  TYN ++  LCK +  +DA  +   +   
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  +  T+  +  AL++ GR +EA+         G +                 P+  +
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV-----------------PNYWT 688

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           Y         QG  ++  Q+F      G  ++ S  +N +   + +R  I++A
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVD-SGMLNFIVRELLQRGEITRA 740



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 236/458 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY+ ++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   PD + +++LI  + N G +++A  +  +M    L P+ VTY  
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A    +++ + G+ P  + +N +I   C   K ++A +++  M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + +N++ID++CK G + E+ ++ ++M R G+K N IT NT+++  C   K+DEA 
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   + V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     + ALQ    +     K + 
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F ++   G   +  TY  +  ++  +  LE+   L   
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           ME+     D      I   L++ G +  A  + S++ E
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 189/385 (49%), Gaps = 56/385 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
           +PD  TY  LI   C+AG ++  F  +  + +KG +++ I    +L  LC +K+  +A  
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143

Query: 241 ------------------------------------MLLNSASKR--GYYLDEVSYGTLI 262
                                               +L   A  R  G   D VSY T+I
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+F++  +++A   + EM +R I+P   TYN++I  L ++   ++A+++LN ++++G++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+N+I+HG+CS GQ ++A+ F  KM     +PD+VT ++L+  LC+ G   +A K 
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F S   +G   +  TY TL+     +  L +  GLL  M    + PD Y ++ +  A   
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAN 383

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++++A    S M + G                 ++P++++Y   I   C  GR +DA+
Sbjct: 384 QGKVDQAMLVFSKMRQQG-----------------LNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 503 QIFEETRQKGIAINKSTYMNLMNGL 527
             FE+   +G++     Y +L++GL
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGL 451



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 35/265 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYNT+++     GK++E   LLS M   GL PN  TY+ L++GYCK+  
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI--------------------------------- 87
           +++A+ +   M  +   PD+ TYN+++                                 
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621

Query: 88  --NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
             +G C   + ++A ++ + +  + L  +  T+N +I+   + GR+ EA  L      +G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+ +M +    +G +++  ++  +ME+NG + D    N ++    + G +  A 
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741

Query: 206 RMMDVMGRKGLKMNTITLNTILHTL 230
             + ++  K   +   T +  +  L
Sbjct: 742 TYLSMIDEKHFSLEASTASLFIDLL 766


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 272/536 (50%), Gaps = 33/536 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT+NT+L  L  + +++E  DL   M K    PN  T+  L++G C+ G + E
Sbjct: 145 LGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVE 200

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLI 122
           A+ ++D M ++   P+  TY  +++G C  G    A  L ++ME +  ++P+VV YNT+I
Sbjct: 201 AVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTII 260

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +  ++ GR  +A  L  E+ E  I P+ VT+N MI  +C  G+   A ++++ M E   +
Sbjct: 261 DGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN 320

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT++ LI+A  K G   EA  + D M  + +  +T+T ++++   C + +LD A  +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                 +G   D +++ TLI GY R ++ +  +KL  EM E  ++ +T TY  +I G  Q
Sbjct: 381 FYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 440

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--------VEK 354
            G    A D+L E++ SG+ P+  T NT++ G C  G+++ AL+    M          +
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASR 500

Query: 355 SF---KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            F   +PD+ T NIL+ GL  EG   +A + +     +G   D++TY+++I  LCK+ RL
Sbjct: 501 PFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           ++A  +   M  K   PD  T+  + T   ++G +++  +    M + G           
Sbjct: 561 DEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRG----------- 609

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                 I   +I+Y   I           AL IF+E    G+  +  T  N++ GL
Sbjct: 610 ------IVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 242/457 (52%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P+ +TY TI+D + K G      +LL  M++   ++PN   YN ++ G  K G   +
Sbjct: 212 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSD 271

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M + +  PD+ TYN +ING+C +G   +A +L +EM   K+ PDVVT++ LIN
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+    I P+ VT++ MI  +CK+ ++D A  +       G SP
Sbjct: 332 AFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +T+NTLI   C+A  +++  +++  M   GL  NTIT  T++H  C    L+ A  LL
Sbjct: 392 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 451

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   + V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 452 QEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQT 511

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q  + M 
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 571

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF PD+VT N L++G C+ G+++  L+ F     +G   D++TY TLI    K   ++
Sbjct: 572 SKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNID 631

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T L     LE A
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERA 668



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 163/581 (28%), Positives = 270/581 (46%), Gaps = 71/581 (12%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +  ++  + + G+ + V  L   M+   +  N  ++ IL+  +C    L  A+ 
Sbjct: 78  LPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALS 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    P V T+N L++G C    + EA  L  +M      P+VVT+ TL+N   
Sbjct: 138 TFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLC 193

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++PN +T+  ++   CK G    A  ++R MEE +   P+ 
Sbjct: 194 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNV 253

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V YNT+ID   K G   +A  +   M  K +  + +T N +++  C   +  +A  LL  
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    D V++  LI  + ++ K   A +L+DEM  R I+PST TY++MI G  +  +
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373

Query: 306 TEQA-----------------------------------IDMLNELLQSGMIPDETTFNT 330
            + A                                   I +L+E+ ++G++ +  T+ T
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGFC  G +  A     +M+     P++VTCN LL GLC  G L+ AL+ F+      
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D  TYN LI  L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 440 LVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           L +  RL+EA Q F S+                    +   P  ++++  I  +C  G  
Sbjct: 554 LCKQSRLDEATQMFDSM------------------GSKSFSPDVVTFNTLITGYCKAGMV 595

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            D L++F E  Q+GI  +  TY+ L+ G  ++  +I  A+D
Sbjct: 596 DDGLELFCEMGQRGIVADAITYITLIYGF-RKVDNIDGALD 635



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 220/427 (51%), Gaps = 11/427 (2%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V YNTI+D L+K G+ ++  +L  +M+++ + P+  TYN +++G+C  G   +A +
Sbjct: 250 IPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQ 309

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M + K  PDV T++ LIN +   G   EA  L  EM    ++P  VTY+++I+ F 
Sbjct: 310 LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFC 369

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +  R   A  +       G  P+ +T N +I  YC+  ++D   K++  M E G   + +
Sbjct: 370 KQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 429

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY TLI   C+ G++  A  ++  M   G+  N +T NT+L  LC   KL +A  +  + 
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489

Query: 247 SKR-----------GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
            K            G   D  +Y  LI G   + K   A +L++EM  R I+P T TY++
Sbjct: 490 QKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           MI GL +  + ++A  M + +      PD  TFNT+I G+C  G V+  L+   +M ++ 
Sbjct: 550 MIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRG 609

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
              D +T   L+ G  +   ++ AL  F+  I  G   D++T   +++ L  +  LE A 
Sbjct: 610 IVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAV 669

Query: 416 GLLSEME 422
            +L +++
Sbjct: 670 AMLEDLQ 676



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 247/513 (48%), Gaps = 36/513 (7%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L SG+ ++  L +A+ +   M +++ LP V  +  L+      G  +    L K+ME L+
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           +  +  ++  L+  F    +   A     ++ + G  P  VT N ++   C E +I +A 
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            +   M      P+ VT+ TL++  C+ G + EA  ++D M   GL+ N IT  TI+  +
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           C       A  LL    +  + +  V  Y T+I G ++D + + A  L+ EM+E++I P 
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TYN MI G   SG+   A  +L E+L+  + PD  TF+ +I+ F  EG+  +A + ++
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M+ +S  P  VT + ++ G C++  L+ A   F     KG + D +T+NTLI+  C+ +
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R++D   LL EM E  L  +  TY  +     + G L  AQ     M+ +G +   VV  
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSG-VCPNVVTC 466

Query: 470 NT------------------------------SKTPEEIDPSSISYSEKINEHCSQGRYK 499
           NT                              S+    ++P   +Y+  I    ++G++ 
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +A +++EE   +GI  +  TY ++++GL K+ +
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 175/324 (54%), Gaps = 11/324 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P  VTY++++D   K+ +L+    +      +G  P+  T+N L++GYC+   + + ++
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK 414

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  MT+   + +  TY  LI+G+C  G L  A  L +EM S  + P+VVT NTL++   
Sbjct: 415 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLC 474

Query: 127 ESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           ++G+   ++E FK +     ++D     +G++P+  T+NI+I     EGK  +A ++   
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEE 534

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M   G  PD +TY+++ID  CK   ++EA +M D MG K    + +T NT++   C    
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGM 594

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D+   L     +RG   D ++Y TLI G+ + +  + AL ++ EM    + P T T   
Sbjct: 595 VDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRN 654

Query: 296 MIWGLSQSGKTEQAIDMLNELLQS 319
           M+ GL    + E+A+ ML +L  S
Sbjct: 655 MLTGLWSKEELERAVAMLEDLQMS 678



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 159/289 (55%), Gaps = 11/289 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD +T+NT++    +  ++++   LL +M + GLV N  TY  L+ G+C++G L  A
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-----------LP 113
             ++  M  +   P+V T N L++G C+ G L++A  + K M+  K+            P
Sbjct: 448 QDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEP 507

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           DV TYN LI      G+ +EA +L +E+   GI P+ +T++ MI   CK+ ++D+A ++ 
Sbjct: 508 DVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
            +M    FSPD VT+NTLI   CKAG +++   +   MG++G+  + IT  T+++     
Sbjct: 568 DSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKV 627

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
             +D A  +       G Y D ++   ++TG +  E+  RA+ + ++++
Sbjct: 628 DNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 27/302 (8%)

Query: 254 DEVSYG----TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           DE  +G     L +G+   +  + A+ L+  M   + +PS   +  ++  + + G+ +  
Sbjct: 41  DEAGFGGESLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVV 100

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           I +  ++    M  +  +F  ++  FCS  ++  AL    K+ +  F P +VT N LL G
Sbjct: 101 ISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHG 160

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC E  + +AL  F          + VT+ TL++ LC+E R+ +A  LL  M E  L P+
Sbjct: 161 LCVEDRISEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPN 216

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------------------ 471
           + TY  I   + + G    A      M E   I   VV  NT                  
Sbjct: 217 QITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLF 276

Query: 472 -SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                +EI P  ++Y+  IN  C  GR+ DA Q+ +E  ++ I  +  T+  L+N  +K 
Sbjct: 277 IEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKE 336

Query: 531 RK 532
            K
Sbjct: 337 GK 338


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 163/530 (30%), Positives = 255/530 (48%), Gaps = 48/530 (9%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G VP+   YN ++        L  A R  D M  +   P+V+TYN+L+   C  G  +EA
Sbjct: 151 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
             + ++M      P+VVTYNTL+  FF +G    A +L+  + E G+KPN VT N M+  
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CK GK++ A K+   M   G +PD V+YNTL+   CKAG   EA  +   M +KG+  +
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T  +++H +C    L+ A  L+    +RG  ++EV++  LI G+ +    + AL    
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            MK+ +I PS   YNA+I G    G+ ++A ++L+E+   G+ PD  T++TII  +C   
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
               A + + +M+EK   PD +T + L+  LC E  L  A   F++ I  G   D  TY 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF------- 452
           +LI   CKE  +E A  L  +M +  + PD  TY+ +   L +S R  EAQ+        
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569

Query: 453 ---------------------------------TSIMVETGKINHQVVQPNTSKTPEEID 479
                                              +M E  K+   ++  N +     +D
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN-----LD 624

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            S   YS  I+ HC  G    AL   ++  Q G A N ++ ++L+ GL +
Sbjct: 625 GS--VYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFE 672



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 238/455 (52%), Gaps = 50/455 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC P+ VTYNT++ A F+ G+++    L+  M++ GL PN  T+N +V+G CK G 
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A +V D M +    PD  +YN L+ G+C AG   EA  +  EM    ++PDVVT+ +
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335

Query: 121 LINRFFESGRSMEAFKLIDELDEHG----------------------------------- 145
           LI+   ++G    A  L+ ++ E G                                   
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           IKP+ V +N +I  YC  G++D+A +++  ME  G  PD VTY+T+I A CK  +   AF
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +   M  KG+  + IT ++++  LC EK+L +A++L  +  K G   DE +Y +LI G+
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 515

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++     AL L D+M +  ++P   TY+ +I GLS+S +  +A  +L +L     IP  
Sbjct: 516 CKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPAN 575

Query: 326 TTFNTIIH---------------GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           T ++ ++H               GFC +G + +A + +  M+++++  D    ++L+ G 
Sbjct: 576 TKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGH 635

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           CR G + KAL F +  +  G A +S +  +LI  L
Sbjct: 636 CRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGL 670



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 225/423 (53%), Gaps = 18/423 (4%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
           +P V+ YN ++    ++  +  A +  D +   G+ PN  T+NI+++  C  G   +A  
Sbjct: 153 VPSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           I+R+M   G  P+ VTYNTL+ A  +AG ++ A R++ +M   GLK N +T N++++ +C
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              K+++A  + +   + G   D VSY TL+ GY +   ++ AL ++ EM ++ IMP   
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T+ ++I  + ++G  E+A+ ++ ++ + G+  +E TF  +I GFC +G ++ AL     M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            +   KP +V  N L++G C  G +++A +       KG   D VTY+T+IS+ CK    
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
             AF L  +M EK + PD  TY+++   L    RL +A      M++ G           
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG----------- 500

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 + P   +Y+  I+ HC +G  + AL + ++  + G+  +  TY  L+NGL K  
Sbjct: 501 ------LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 554

Query: 532 KSI 534
           +++
Sbjct: 555 RAM 557



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 15/194 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNIL------------- 51
           G LPD VTY+ +++ L K  +  E + LL  +  +  +P  T Y+ L             
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVL 594

Query: 52  --VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
             + G+C  G + EA +V   M       D   Y++LI+G C AG + +A    K+M   
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQG 654

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
              P+  +  +LI   FE+G  +EA ++I +L  +    +A     +I     EG +D  
Sbjct: 655 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAV 714

Query: 170 CKIVRNMEENGFSP 183
             ++  M ++G  P
Sbjct: 715 LDVLHGMAKDGLLP 728



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 59/135 (43%)

Query: 15  TILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN 74
            +L     KG +NE   +   M  +    + + Y++L+ G+C+ G + +A+     M Q 
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQG 654

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
              P+  +   LI G    GM+ EA ++ +++ +   L D      LI+     G     
Sbjct: 655 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAV 714

Query: 135 FKLIDELDEHGIKPN 149
             ++  + + G+ P+
Sbjct: 715 LDVLHGMAKDGLLPS 729


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 267/529 (50%), Gaps = 19/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           + G    PD  T+N ++ AL  +G++ +   +  DM  +G  P+  TY+IL+   CK   
Sbjct: 153 ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASG 212

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++AM ++D M      PD+ TYN+LIN  CN G ++EA  +  ++ S    PD VTY  
Sbjct: 213 YRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTP 272

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     S R  E  +L  E+  +   P+ VT N ++   C++G +D+A K+V +M E+G
Sbjct: 273 VLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG 332

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY++++D  C  G +++A  ++  +   G K +TI   T+L  LC  ++ + A 
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+          DEV++ T+I    +    +RA+K+ ++M E    P   TYN++I GL
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                 + A+++L+ L   G  PD  TFNT++ G CS  + E A Q    M+     PD 
Sbjct: 453 CNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA 512

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N +++ LC++G+L +A++  +     G   +  TYN ++ +L K  + ++A  LLS 
Sbjct: 513 TTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSG 572

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  TY  + + + ++G++EEA     +MV  G                 + P
Sbjct: 573 MTNGT--PDLITYNTVISNITKAGKMEEALDLLRVMVSNG-----------------LSP 613

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +I+Y       C +     A+++    +  G++ + + Y +++ G  +
Sbjct: 614 DTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQ 662



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 266/519 (51%), Gaps = 22/519 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYNT+++   + G++ + R L+S M      P+  T+N L+   C  G + +A+ V D 
Sbjct: 131 VTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDD 187

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P V TY++L++  C A    +A  L  EM +    PD+VTYN LIN     G 
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA  ++ +L  HG KP+AVT+  ++K  C   +  +  ++   M  N  +PD VT+NT
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++ + C+ G ++ A +++D M   G   + +T ++IL  LC   ++D+A  LL+     G
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D ++Y T++ G    E+   A +L  EM      P   T+N +I  L Q G  ++AI
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            ++ ++ ++G  PD  T+N+II G C+E  ++ A++  + +     KPDIVT N LL GL
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C     E A +   + +      D+ T+NT+I+SLC++  L  A   L  M E    P++
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQ 547

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  +  AL+++G+ +EA K  S M              T+ TP+      I+Y+  I+
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGM--------------TNGTPD-----LITYNTVIS 588

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                G+ ++AL +       G++ +  TY +L  G+ +
Sbjct: 589 NITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICR 627



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 244/485 (50%), Gaps = 23/485 (4%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           NIL+   C  G + +A RV   +  + +   V TYN ++NG+C AG +E+A RL   +  
Sbjct: 102 NILIKRLCSGGRVADAERVFATLGASAT---VVTYNTMVNGYCRAGRIEDARRL---ISG 155

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
           +   PD  T+N LI      GR  +A  + D++   G  P+ VT++I++   CK     +
Sbjct: 156 MPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  ++  M   G  PD VTYN LI+A C  G+++EA  ++  +   G K + +T   +L 
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           +LC  ++  E   L    +      DEV++ T++T   +    +RA+K+ D M E   +P
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
              TY++++ GL   G+ + A+++L+ L   G  PD   + T++ G CS  Q E A +  
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            +MV     PD VT N +++ LC++G++++A+K        G   D VTYN++I  LC E
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           R ++DA  LLS ++     PD  T+  +   L    R E+A++    M+ +         
Sbjct: 456 RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS--------- 506

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                   +  P + +++  I   C +G    A++  +   + G   N+STY  +++ L+
Sbjct: 507 --------DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALL 558

Query: 529 KRRKS 533
           K  K+
Sbjct: 559 KAGKT 563



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 241/471 (51%), Gaps = 8/471 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +   GC PD VTY  +L +L    +  EV +L ++M      P+  T+N +V+  C+ G 
Sbjct: 258 LPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGL 317

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A++VVD M+++  +PD+ TY+ +++G C+ G +++A  L   ++S    PD + Y T
Sbjct: 318 VDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++       +   A +L+ E+      P+ VT N +I   C++G +D+A K+V  M ENG
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTYN++ID  C    +++A  ++  +   G K + +T NT+L  LC   + ++A 
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAE 497

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+ +        D  ++ T+IT   +     +A++    M E   +P+  TYN ++  L
Sbjct: 498 QLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557

Query: 301 SQSGKTEQAIDMLNELLQSGMI---PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            ++GKT++A+ +L     SGM    PD  T+NT+I      G++E+AL     MV     
Sbjct: 558 LKAGKTQEALKLL-----SGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLS 612

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD +T   L  G+CRE   ++A++        G + D+  YN ++   C+  R + A   
Sbjct: 613 PDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDC 672

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            + M      PD  TY  +  AL     L+EA++    +   G ++  +++
Sbjct: 673 FAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSLIE 723



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 243/460 (52%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTYN +++A+  +G ++E  ++LSD+   G  P+  TY  ++   C    
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KE   +   M  NK  PD  T+N ++   C  G+++ A ++   M     +PD+VTY++
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + GR  +A +L+  L  +G KP+ + +  ++K  C   + + A +++  M  + 
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT+NT+I + C+ G ++ A ++++ M   G   + +T N+I+  LC E+ +D+A 
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL++    G   D V++ TL+ G    ++   A +L   M      P   T+N +I  L
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G   QAI+ L  + ++G IP+++T+N ++      G+ ++AL+  + M   +  PD+
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT--PDL 580

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++S + + G +E+AL   R  +  G + D++TY +L   +C+E   + A  +L  
Sbjct: 581 ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCR 640

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +++  L PD   Y  I     ++ R + A    + MV +G
Sbjct: 641 LQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSG 680



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 190/404 (47%), Gaps = 28/404 (6%)

Query: 133 EAFKLIDELDEHG-----IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +A  L+D +   G     +    V  NI+IK  C  G++  A ++   +   G S   VT
Sbjct: 76  DALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVT 132

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT+++  C+AG +E+A R++  M       +T T N ++  LC   ++ +A  + +   
Sbjct: 133 YNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDML 189

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG     V+Y  L+    +     +A+ L DEM+ +   P   TYN +I  +   G  +
Sbjct: 190 HRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 249

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++L++L   G  PD  T+  ++   C   + ++  +   +M      PD VT N ++
Sbjct: 250 EALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIV 309

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++++A+K        G   D VTY++++  LC   R++DA  LLS ++     
Sbjct: 310 TSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 369

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD   Y  +   L    + E A++  + MV              S  P    P  ++++ 
Sbjct: 370 PDTIAYTTVLKGLCSIEQWEHAEELMAEMV-------------CSDCP----PDEVTFNT 412

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            I   C +G    A+++ E+  + G   +  TY ++++GL   R
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNER 456


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 243/461 (52%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T+ T++    ++G LN    +   M   G +    +  +LV+G+CK G 
Sbjct: 184 MANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGR 243

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+R V  +++    PD  T+N L+NG+C  G + +A  +   M      PDV TYN+
Sbjct: 244 VEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   +A +++ ++      PN VT+N +I   CKE +I+ A  + R +   G
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+NTLI   C + N + A  M + M  KG K +  T + ++ +LC E++L EA 
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL      G   + V Y TLI G  +  +   A +++D+M+   +  S+ TYN +I GL
Sbjct: 424 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGL 483

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + E+A  ++++++  G+ PD+ T+N+++  FC  G +EKA      M     +PDI
Sbjct: 484 CKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDI 543

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ GLCR G ++ A K  RS  +KG  +    YN +I +L   +R ++   L  E
Sbjct: 544 FTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFRE 603

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETG 460
           M EK   PD  T+  +   L    G ++EA  FT  M+E G
Sbjct: 604 MMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKG 644



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 267/536 (49%), Gaps = 17/536 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD   YN  L+AL +  KL  V  L S M  +G+V + +T+N+L+   CK   L+ 
Sbjct: 117 LGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRP 176

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +++ M  +   PD  T+  L+ G+   G L  A +++K+M     L   V+   L+N
Sbjct: 177 AILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVN 236

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + GR  EA + + E+ E G  P+ VT N ++  +C+ G ++ A  IV  M E GF P
Sbjct: 237 GFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDP 296

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN+LI   CK G  E+A  ++  M  +    NT+T NT++  LC E +++ A  L 
Sbjct: 297 DVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLA 356

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G   D  ++ TLI G    +  + A+++++EMK +   P  FTY+ +I  L   
Sbjct: 357 RILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE 416

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + ++A+ +L E+  SG   +   +NT+I G C   ++E A +  ++M         VT 
Sbjct: 417 RRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTY 476

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC+   +E+A +     I++G   D  TYN+L++  C+   +E A  ++  M  
Sbjct: 477 NTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS 536

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               PD +TY  +   L  +GR++ A K    ++ + ++   V+ P+             
Sbjct: 537 NGCEPDIFTYGTLIGGLCRAGRVDVASK----LLRSVQMKGIVLTPH------------- 579

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +Y+  I     + R K+ +++F E  +K    +  T+  +  GL      I +A+D
Sbjct: 580 AYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAID 635



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 152/560 (27%), Positives = 264/560 (47%), Gaps = 53/560 (9%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP N    T+L  L +    + +  LL  +K  G +PN TT+  L+  +     ++  ++
Sbjct: 55  LPPN---ETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLK 111

Query: 67  VVD------------------LMTQNK---------------SLPDVWTYNMLINGWCNA 93
           +++                  L+  NK                + DV T+N+LI   C A
Sbjct: 112 ILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKA 171

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
             L  A  + +EM +  L PD +T+ TL+  F E G    A K+  ++  +G     V+ 
Sbjct: 172 HQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSV 231

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
            +++  +CKEG++++A + V  + E GFSPD VT+N+L++  C+ GN+ +A  ++D M  
Sbjct: 232 KVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIE 291

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           KG   +  T N+++  +C   + ++A  +L     R    + V+Y TLI+   ++ +   
Sbjct: 292 KGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEA 351

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L   +  + ++P   T+N +I GL  S   + A++M  E+   G  PDE T++ +I 
Sbjct: 352 ATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILID 411

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
             C E ++++AL    +M       + V  N L+ GLC+   +E A + F    L G + 
Sbjct: 412 SLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSR 471

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            SVTYNTLI  LCK +R+E+A  L+ +M  + L PD++TY ++ T     G +E+A    
Sbjct: 472 SSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIV 531

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M   G                  +P   +Y   I   C  GR   A ++    + KGI
Sbjct: 532 QTMASNG-----------------CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574

Query: 514 AINKSTYMNLMNGLIKRRKS 533
            +    Y  ++  L  R+++
Sbjct: 575 VLTPHAYNPVIQALFMRKRT 594



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 229/466 (49%), Gaps = 41/466 (8%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF   PD VT+N++++   + G +N+  D++  M ++G  P+  TYN L+SG CKLG  
Sbjct: 257 EGFS--PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           ++A+ ++  M   +  P+  TYN LI+  C    +E A  L + + S  LLPDV T+NTL
Sbjct: 315 EKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTL 374

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I     S     A ++ +E+   G KP+  T++I+I   C E ++ +A  +++ ME +G 
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           + + V YNTLID  CK+  +E+A  + D M   G+  +++T NT++  LC  K+++EA  
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L++     G   D+ +Y +L+T + R     +A  +   M      P  FTY  +I GL 
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554

Query: 302 QSGKTEQAIDMLNELLQSGMI-----------------------------------PDET 326
           ++G+ + A  +L  +   G++                                   PD  
Sbjct: 555 RAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDAL 614

Query: 327 TFNTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           T   +  G C+ G  +++A+ F  +M+EK   P+  +   L  GLC   + +  ++    
Sbjct: 615 THKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINM 674

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
            + K +  +  T  ++I    K R+  DA   L  + +++  P RY
Sbjct: 675 VMEKAQMSERET--SMIRGFLKIRKFNDALANLGGILDRQ-NPKRY 717



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 26/258 (10%)

Query: 288 PSTFTYN------AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           PS+ T++       ++  L+QS   +    +L +L  SG IP+ TTF T+I  F +  ++
Sbjct: 47  PSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEI 106

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E  L+      E  FKPD    NI L+ L  +  L+         + +G  +D  T+N L
Sbjct: 107 ENLLKILEN--ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVL 164

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I +LCK  +L  A  +L EM    L PD  T+  +    +E G L  A K    M+  G 
Sbjct: 165 IKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGC 224

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +                  +++S    +N  C +GR ++AL+   E  ++G + ++ T+ 
Sbjct: 225 L-----------------LTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFN 267

Query: 522 NLMNGLIKRRKSISKAVD 539
           +L+NG   R  +++ A+D
Sbjct: 268 SLVNGFC-RIGNVNDALD 284


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 270/520 (51%), Gaps = 20/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++  L  +G++ +   LL DM ++G  PN  TY +L+   C+    ++AM V
Sbjct: 141 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAV 200

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      P++ TYN++ING C  G +++A  L   + S    PD V+Y TL+     
Sbjct: 201 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCA 260

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S R  +  +L  E+ E    PN VT +++I+++C+ G +++A +++  M E+G + +   
Sbjct: 261 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTL 320

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            N +I++ CK G +++AF++++ MG  G   +TI+  T+L  LC  ++ D+A  LLN   
Sbjct: 321 CNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV 380

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     +EV++ T I    +     +A+ L ++M E        TYNA++ G    G  +
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++   +      P+  T+ T++ G C+  +++ A +   +M+     P++VT N+L+
Sbjct: 441 SALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLV 497

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           S  C++G LE+A++     +  G   + +TYNTL+  + K+   EDA  LL  +  K + 
Sbjct: 498 SFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVS 557

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  T+++I   L +  R+EEA +   ++ + G                 + P ++ Y++
Sbjct: 558 PDVITFSSIIGILSKEDRIEEAVQLFHVVQDIG-----------------MRPKAVVYNK 600

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +   C +    +A+  F      G   N+STY+ L+ GL
Sbjct: 601 ILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 242/468 (51%), Gaps = 3/468 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN I++ + ++G++++ R+LL+ +   G  P+  +Y  L+ G C    
Sbjct: 204 MRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKR 263

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   +   M +   +P+  T++MLI  +C  GM+E A ++ ++M       +    N 
Sbjct: 264 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNI 323

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR  +AFKL++++  +G  P+ +++  ++K  C+  + D A +++  M  N 
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT I   C+ G +E+A  +++ M   G  +  +T N +++  C +  +D A 
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSAL 443

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S   +    + ++Y TL+TG    E+ + A +L  EM      P+  T+N ++   
Sbjct: 444 ELFRSMPCKP---NTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFF 500

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  E+AI+++ ++++ G  P+  T+NT++ G   +   E AL+  + +V K   PD+
Sbjct: 501 CQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDV 560

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T + ++  L +E  +E+A++ F      G    +V YN ++  LCK   +++A    + 
Sbjct: 561 ITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAY 620

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G L+EAQ   S++   G +N  + +
Sbjct: 621 MVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLTE 668



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 263/553 (47%), Gaps = 60/553 (10%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G  P+      L+   C+ G   +A RV+     + S  DV+ YN L+ G+C  G L+ A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            RL   + S+ + PD  TY  LI    + GR  +A  L+D++   G +PN VT+ ++++ 
Sbjct: 131 RRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            C+    ++A  ++  M   G +P+ VTYN +I+  C+ G +++A  +++ +   G + +
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           T++  T+L  LC  K+ D+   L     ++    +EV++  LI  + R     RA+++ +
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 280 EMKERQIM-----------------------------------PSTFTYNAMIWGLSQSG 304
           +M E                                       P T +Y  ++ GL ++ 
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A ++LNE++++   P+E TFNT I   C +G +E+A+    +M E      +VT N
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++G C +G ++ AL+ FRS   K    +++TY TL++ LC   RL+ A  L++EM   
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCNAERLDGAAELVAEMLRG 484

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSK------- 473
              P+  T+  + +   + G LEEA +    M+E G     I +  +    +K       
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544

Query: 474 -------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                    + + P  I++S  I     + R ++A+Q+F   +  G+      Y  ++ G
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604

Query: 527 LIKRRKSISKAVD 539
           L KR + I  A+D
Sbjct: 605 LCKRCE-IDNAID 616



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 20/146 (13%)

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           RS    G+A D      LI +LC+  R  DA  +L   E      D + Y  +       
Sbjct: 65  RSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRY 124

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G L+ A++    M                     + P + +Y+  I   C +GR  DAL 
Sbjct: 125 GHLDAARRLIGSM--------------------PVAPDAYTYTPLIRVLCDRGRVADALS 164

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           + ++  ++G   N  TY  L+  + +
Sbjct: 165 LLDDMLRRGCQPNVVTYTVLLEAMCR 190


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 223/396 (56%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +++ L K+GKL + +D +  M+  G+ PN  TYN ++ GYC  G ++ A  V+D+M
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PD +TY  LI+G C  G LEEA  + ++M+ + LLP  VTYNTLI+ +   G  
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           ++AF   DE+    I P   T+N++I     EGK+D+A  ++++M ++G  PD +TYN L
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  C+ GN ++AF + D M  KG++   +T  ++++ L    ++  A  L     + G 
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D + +  LI G+  +   +RA  L  EM +R I+P   TYN ++ G  + GK E+A +
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L E+ + G+ PD  ++NT+I G+   G +  A    ++M+   F P ++T N L+ GLC
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           +    + A +  +  + KG   D  TY +LI  + K
Sbjct: 598 KNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/425 (33%), Positives = 232/425 (54%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           MK++G+VP   T+N ++S + KL   +    +   M + K    V+T+N++IN  C  G 
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      ME+L + P+VVTYNT+I+ +   GR   A  ++D +   G++P++ T+  
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   CK GK+++A  I+  M+E G  P  VTYNTLID  C  G++ +AF   D M R+ 
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +     T N ++H L  E K+DEA  ++      G   D ++Y  LI GY R   A +A 
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L DEM  + I P+  TY ++I+ LS+  + + A D+  ++++ G  PD   FN +I G 
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C+ G +++A     +M +++  PD VT N L+ G CREG +E+A +  +    +G   D 
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           ++YNTLIS   K   + DAF +  EM      P   TY A+   L ++ + + A++    
Sbjct: 552 ISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKE 611

Query: 456 MVETG 460
           MV  G
Sbjct: 612 MVSKG 616



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/370 (36%), Positives = 196/370 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYNT++     +G++   R +L  MK +G+ P+  TY  L+SG CK G 
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK 321

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  +++ M +   LP   TYN LI+G+CN G L +AF  R EM    +LP V TYN 
Sbjct: 322 LEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  F  G+  EA  +I ++ + GI P+++T+NI+I  YC+ G   KA  +   M   G
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTY +LI    K   M+ A  + + + R+G   + I  N ++   C    LD A+
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF 501

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    KR    DEV+Y TL+ G  R+ K   A +L  EMK R I P   +YN +I G 
Sbjct: 502 ALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGY 561

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G    A  + +E+L  G  P   T+N +I G C   Q + A +   +MV K   PD 
Sbjct: 562 SKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDD 621

Query: 361 VTCNILLSGL 370
            T   L+ G+
Sbjct: 622 STYFSLIEGI 631



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 239/476 (50%), Gaps = 19/476 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            ++MLI   C     ++AF     M+   ++P + T+N +++ F +  ++   + L  E+
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
               IK    T NIMI   CKEGK+ KA   + +ME  G  P+ VTYNT+I   C  G +
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E A  ++D+M  +G++ ++ T  +++  +C   KL+EA  +L    + G     V+Y TL
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY       +A    DEM  R I+P+  TYN +I  L   GK ++A  M+ ++  SG+
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD  T+N +I+G+C  G  +KA   H++M+ K  +P +VT   L+  L +   ++ A  
Sbjct: 408 VPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADD 467

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F   I +G + D + +N LI   C    L+ AF LL EM+++ + PD  TY  +     
Sbjct: 468 LFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRC 527

Query: 442 ESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPEEID--------------PSSI 483
             G++EEA++    M   G     I++  +    SK  +  D              P+ +
Sbjct: 528 REGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLL 587

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +Y+  I   C   +   A ++ +E   KGI  + STY +L+ G+ K   S S+A D
Sbjct: 588 TYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDS-SEASD 642



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 38/344 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LP  VTYNT++D    KG L +      +M ++ ++P  +TYN+L+      G 
Sbjct: 332 MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGK 391

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  ++  M  +  +PD  TYN+LING+C  G  ++AF L  EM S  + P +VTY +
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  R   A  L +++   G  P+ +  N +I  +C  G +D+A  +++ M++  
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTL+   C+ G +EEA  ++  M R+G++ + I                   
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHI------------------- 552

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                           SY TLI+GY +    N A  + DEM      P+  TYNA+I GL
Sbjct: 553 ----------------SYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGL 596

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            ++ + + A ++L E++  G+ PD++T+ ++I G    G+V+ +
Sbjct: 597 CKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVDDS 637



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 199/407 (48%), Gaps = 19/407 (4%)

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           D  G K +++  +++I+  C+  + D A +    M+E G  P   T+N ++    K    
Sbjct: 159 DRLGTK-SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQT 217

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E  + +   M R  +K    T N +++ LC E KL +A   + S    G   + V+Y T+
Sbjct: 218 ETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTV 277

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY    +   A  + D MK R + P ++TY ++I G+ + GK E+A  +L ++ + G+
Sbjct: 278 IHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGL 337

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +P   T+NT+I G+C++G + KA  + ++MV ++  P + T N+L+  L  EG +++A  
Sbjct: 338 LPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADG 397

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             +     G   DS+TYN LI+  C+    + AF L  EM  K + P   TY ++   L 
Sbjct: 398 MIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLS 457

Query: 442 ESGRLEEAQKFTSIMVETGK----------INHQVVQPNTSKT--------PEEIDPSSI 483
           +  R++ A      ++  G           I+      N  +            I P  +
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEV 517

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +Y+  +   C +G+ ++A ++ +E +++GI  +  +Y  L++G  KR
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKR 564



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 184/419 (43%), Gaps = 49/419 (11%)

Query: 115 VVTYNTLINRFFESGR--SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK- 171
           ++TYN L      S    S     +ID L    + PNA T + ++  +  +  +D     
Sbjct: 11  LLTYNKLKPSILISYAHFSSTPIPIIDHLHAETLHPNASTDSPLVITH--QSLLDSIQSS 68

Query: 172 ---IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
              +++++  N  SP  ++  TL+  + K+   + A + +  +G KGL + T  L   + 
Sbjct: 69  QWHLIKHLAPN-LSPSLIS-ATLLSLHKKS---DLALQFVTHIGFKGLDIKTKCLAVAVV 123

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           +     K    ++L  +   R   + +V +   IT                  ++R    
Sbjct: 124 SRSPSPK-STLHLLKQTIESRVAGVKDVFHELAIT------------------RDRLGTK 164

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S+  ++ +I    +  + + A +  + + + G++P   TFN ++  F    Q E     +
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            +M     K  + T NI+++ LC+EG L+KA  F  S    G   + VTYNT+I   C  
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            R+E A  +L  M+ + + PD YTY ++ + + + G+LEEA      M E G +      
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLL------ 338

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                      P++++Y+  I+ +C++G    A    +E  ++ I    STY  L++ L
Sbjct: 339 -----------PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHAL 386


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 164/529 (31%), Positives = 270/529 (51%), Gaps = 28/529 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++  L + GKL     L   M K+GLVPN  TYN L++  C  G 
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+++   M  + SL +  TYN +I G C  G +E+A  L ++M  +  LP VVTYNT
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +   G    A +L+D + E+G +P+  T+N ++  + K GK++ A    + M E G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ V+Y TLID + K G ++ A  +++ M   G   N  + N +++ L  E +  EA 
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +  +++G   + ++Y TLI G  R+ +   A K++ +M++R+ +P+ +TY+++I+GL
Sbjct: 611 KICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK ++A  +L E+ + G+ PDE TF ++I GF   G+++ A     +MV+   KP+ 
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNY 730

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T ++LL GL +E +L +         ++ +AV S + +       K+   E    LL+ 
Sbjct: 731 RTYSVLLKGLQKECLLLE-----EKVAVQHEAVYSFSPHE------KDVNFEIVSNLLAR 779

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M E    P   TY+ + + L   GR  EA++    M E G                   P
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG-----------------FCP 822

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               Y   +  HC       AL+IF     KG  ++ S Y  L+  L K
Sbjct: 823 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCK 871



 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 253/525 (48%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +T+NT+++ L KKGK+ E   +LS + +  L P+  TY  L+ G+C+   L  A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M +    P+  TY+ LING CN G ++EA  + +EM    + P V TY   I  
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                   EA +L+  + + G +PN  T+  +I    + GK++ A  +   M + G  P+
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  C  G    A ++   M   G   NT T N I+  LC    +++A +L  
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G     V+Y TLI GY      N A +L D MKE    P  +TYN ++ G S+ G
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 534

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A     E+++ G+ P+  ++ T+I G   +G+V+ AL    +M E    P++ + N
Sbjct: 535 KLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYN 594

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++GL +E    +A K       +G   + +TY TLI  LC+  R + AF +  +ME++
Sbjct: 595 AVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 654

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           K  P+ YTY+++   L + G+ +EA+     M   G                 + P  ++
Sbjct: 655 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG-----------------LAPDEVT 697

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  I+     GR   A  +       G   N  TY  L+ GL K
Sbjct: 698 FTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 150/480 (31%), Positives = 235/480 (48%), Gaps = 24/480 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G L +  TYN I+  L   G + +   L   M K G +P   TYN L++GY   G 
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A R++DLM +N   PD WTYN L++G+   G LE A    +EM    L P+ V+Y T
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+   A  L++ ++E G  PN  ++N +I    KE +  +A KI   M E G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TY TLID  C+ G  + AF++   M ++    N  T +++++ LC E K DEA 
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 680

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +LL    ++G   DEV++ +LI G+    + + A  L   M +    P+  TY+ ++ GL
Sbjct: 681 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740

Query: 301 SQS--------GKTEQAI----------------DMLNELLQSGMIPDETTFNTIIHGFC 336
            +             +A+                ++L  + + G  P   T++T++ G C
Sbjct: 741 QKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLC 800

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
            +G+  +A Q    M E+ F PD      LL   C+   ++ ALK F S   KG  +   
Sbjct: 801 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 860

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            Y  LI +LCK  ++E+A  L   M EK+   D   +  +   L++ G L+   K   IM
Sbjct: 861 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 920



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 245/509 (48%), Gaps = 17/509 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           ++  V D L+++   G   +  + N L+    K   ++ A  +   M  +   P + T+N
Sbjct: 185 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 244

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            LIN     G + EA  +  ++    L PDV TY +LI     +     AF + D + + 
Sbjct: 245 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 304

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G  PN+VT++ +I   C EG++D+A  ++  M E G  P   TY   I A C   + EEA
Sbjct: 305 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 364

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M ++G + N  T   ++  L    KL+ A  L +   K G   + V+Y  LI  
Sbjct: 365 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 424

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                + + ALK++  M+    + +T TYN +I GL   G  E+A+ +  ++L+ G +P 
Sbjct: 425 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 484

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+NT+I+G+ ++G V  A +  + M E   +PD  T N L+SG  + G LE A  +F+
Sbjct: 485 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 544

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             +  G   + V+Y TLI    K+ +++ A  LL  MEE    P+  +Y A+   L +  
Sbjct: 545 EMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKEN 604

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           R  EA+K    M E G +                 P+ I+Y+  I+  C  GR + A +I
Sbjct: 605 RFSEAEKICDKMAEQGLL-----------------PNVITYTTLIDGLCRNGRTQFAFKI 647

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           F +  ++    N  TY +L+ GL +  K+
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKA 676



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 182/375 (48%), Gaps = 17/375 (4%)

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           +MIK    E +I +    +  +   GF     + NTL+    K   +E A  +   M   
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G++ + +T NT+++ L  + K+ EA ++L+   +     D  +Y +LI G+ R+   + A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             ++D M +    P++ TY+ +I GL   G+ ++A+DML E+++ G+ P   T+   I  
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C+    E+A++   +M ++  +P++ T   L+SGL R G LE A+  +   + +G   +
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +VTYN LI+ LC   R   A  +   ME      +  TY  I   L   G +E+A     
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M++ G +                 P+ ++Y+  IN + ++G   +A ++ +  ++ G  
Sbjct: 475 KMLKMGPL-----------------PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 517

Query: 515 INKSTYMNLMNGLIK 529
            ++ TY  L++G  K
Sbjct: 518 PDEWTYNELVSGFSK 532



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 172/375 (45%), Gaps = 59/375 (15%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  +YN +++ L K+ + +E   +   M +QGL+PN  TY  L+ G C+ G 
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA--------------------- 99
            + A ++   M + K LP+++TY+ LI G C  G  +EA                     
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700

Query: 100 --------------FRLRKEMESLKLLPDVVTYNTLINRF-------------------- 125
                         F L + M  +   P+  TY+ L+                       
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYS 760

Query: 126 FESGRSMEAFKLIDEL----DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           F        F+++  L     E G +P   T++ ++   C++G+  +A ++V++M+E GF
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 820

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD   Y +L+ A+CK   ++ A ++   +  KG +++      ++  LC   +++EA  
Sbjct: 821 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 880

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L ++  ++ +  DE+ +  L+ G  ++ + +  +KL   M+ +   P+  TY  +   LS
Sbjct: 881 LFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELS 940

Query: 302 QSGKTEQAIDMLNEL 316
           + GK+ ++  + ++L
Sbjct: 941 RIGKSIESEPLADKL 955



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 24/306 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   CLP+  TY++++  L ++GK +E   LL +M+++GL P+  T+  L+ G+  LG 
Sbjct: 651 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 710

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGML-EEAFRLRKE-------------- 105
           +  A  ++  M      P+  TY++L+ G     +L EE   ++ E              
Sbjct: 711 IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNF 770

Query: 106 ---------MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
                    M  +   P + TY+TL++     GR  EA +L+ ++ E G  P+   +  +
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +  +CK  ++D A KI  ++E  GF      Y  LI A CKAG +EEA  + D M  K  
Sbjct: 831 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 890

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             + I    ++  L  E +LD    LL+    + +  +  +Y  L     R  K+  +  
Sbjct: 891 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEP 950

Query: 277 LWDEMK 282
           L D++K
Sbjct: 951 LADKLK 956



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 119/300 (39%), Gaps = 53/300 (17%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           +++R   P+      MI       +  +  D LNE+   G      + NT++        
Sbjct: 161 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 220

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLS-------------------------------- 368
           VE A   + +M+    +P ++T N L++                                
Sbjct: 221 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 280

Query: 369 ---GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
              G CR   L+ A   F   + +G   +SVTY+TLI+ LC E R+++A  +L EM EK 
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 340

Query: 426 LGPDRYTYAAIHTALV----------------ESGRLEEAQKFTSIMVETGKINHQVVQP 469
           + P  YTY    TAL                 + G     Q +T+++    ++    V  
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400

Query: 470 NTSKT--PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   E + P++++Y+  INE C  GR+  AL+IF      G   N  TY  ++ GL
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 460


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 268/525 (51%), Gaps = 21/525 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  + ++ +L A+ K  K + V  L   M+  G+  N  TY+IL++ +C+   L  A+ 
Sbjct: 78  FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    P++ T + L+NG+C++  + EA  L  +M      P+ VT+NTLI+  F
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  LID +   G +P+ VT+ +++   CK G  D A  ++  ME+    P  +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNT+ID  CK  +M++A  +   M  KG++ N +T ++++  LC   +  +A  LL+  
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    D  ++  LI  + ++ K   A KL+DEM +R I PS  TY+++I G     + 
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     PD  T+NT+I GFC   +VE+ ++   +M ++    + VT NIL
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL + G  + A + F+  +  G   + +TYNTL+  LCK  +LE A  +   ++  K+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P  YTY  +   + ++G++E+       +   G                 + P  ++Y+
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-----------------VKPDVVAYN 540

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I+  C +G  ++A  +F+E ++ G   N   Y    N LI+ R
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY----NTLIRAR 581



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 243/460 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VT +++L+      +++E   L+  M   G  PN  T+N L+ G      
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EAM ++D M      PD+ TY +++NG C  G  + AF L  +ME  KL P V+ YNT
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E  
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  T++ LIDA  K G + EA ++ D M ++ +  + +T +++++  C   +LDEA 
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + D V+Y TLI G+ + ++    ++++ EM +R ++ +T TYN +I GL
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G  + A ++  E++  G+ P+  T+NT++ G C  G++EKA+     +     +P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F +  LKG   D V YNT+IS  C++   E+A  L  E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+E    P+   Y  +  A +  G  E + +    M   G
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 237/445 (53%), Gaps = 1/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VT+NT++  LF   K +E   L+  M  +G  P+  TY ++V+G CK G    A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M Q K  P V  YN +I+G C    +++A  L KEME+  + P+VVTY++LI+ 
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  +A +L+ ++ E  I P+  T + +I  + KEGK+ +A K+   M +    P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY++LI+  C    ++EA +M + M  K    + +T NT++   C  K+++E   +  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+RG   + V+Y  LI G F+    + A +++ EM    + P+  TYN ++ GL ++G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+A+ +   L +S M P   T+N +I G C  G+VE        +  K  KPD+V  N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++SG CR+G  E+A   F+     G   +S  YNTLI +  ++   E +  L+ EM   
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
               D  T   + T ++  GRL+++
Sbjct: 601 GFAGDASTIGLV-TNMLHDGRLDKS 624



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 217/411 (52%), Gaps = 1/411 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY  +++ L K+G  +   +LL+ M++  L P    YN ++ G CK   + +A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M      P+V TY+ LI+  CN G   +A RL  +M   K+ PDV T++ LI+ 
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+ +EA KL DE+ +  I P+ VT++ +I  +C   ++D+A ++   M      PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   CK   +EE   +   M ++GL  NT+T N ++  L      D A  +  
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + ++Y TL+ G  ++ K  +A+ +++ ++  ++ P+ +TYN MI G+ ++G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E   D+   L   G+ PD   +NT+I GFC +G  E+A     +M E    P+    N
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            L+    R+G  E + +  +     G A D+ T   L++++  + RL+ +F
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 237/472 (50%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  ++ L++        +    L ++M++L +  +  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  ++ ++ + G +PN VT + ++  YC   +I +A  +V  M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ VT+NTLI          EA  ++D M  KG + + +T   +++ LC     D A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   +       + Y T+I G  + +  + AL L+ EM+ + I P+  TY+++I  L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + PD  TF+ +I  F  EG++ +A + +++MV++S  P I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + L++G C    L++A + F   + K    D VTYNTLI   CK +R+E+   +  E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L  +  TY  +   L ++G  + AQ+    MV  G                 + P
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-----------------VPP 464

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++Y+  ++  C  G+ + A+ +FE  ++  +     TY  ++ G+ K  K
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 190/345 (55%), Gaps = 1/345 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTY++++  L   G+ ++   LLSDM ++ + P+  T++ L+  + K G 
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++ D M +    P + TY+ LING+C    L+EA ++ + M S    PDVVTYNT
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +  R  E  ++  E+ + G+  N VT+NI+I+   + G  D A +I + M  +G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYNTL+D  CK G +E+A  + + + R  ++    T N ++  +C   K+++ +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  + S +G   D V+Y T+I+G+ R      A  L+ EMKE   +P++  YN +I   
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
            + G  E + +++ E+   G   D +T   ++     +G+++K+ 
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 182/370 (49%), Gaps = 17/370 (4%)

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           E K+D A  +   M ++   P  + ++ L+ A  K    +    + + M   G+  N  T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            + +++  C   +L  A  +L    K GY  + V+  +L+ GY   ++ + A+ L D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
                P+T T+N +I GL    K  +A+ +++ ++  G  PD  T+  +++G C  G  +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A    NKM +   +P ++  N ++ GLC+   ++ AL  F+    KG   + VTY++LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           S LC   R  DA  LLS+M E+K+ PD +T++A+  A V+ G+L EA+K    MV+    
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK---- 354

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          IDPS ++YS  IN  C   R  +A Q+FE    K    +  TY  
Sbjct: 355 -------------RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401

Query: 523 LMNGLIKRRK 532
           L+ G  K ++
Sbjct: 402 LIKGFCKYKR 411



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 143/302 (47%), Gaps = 17/302 (5%)

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           E KLD+A  L     K   +   + +  L++   +  K +  + L ++M+   I  + +T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y+ +I    +  +   A+ +L ++++ G  P+  T +++++G+C   ++ +A+   ++M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
              ++P+ VT N L+ GL       +A+      + KG   D VTY  +++ LCK    +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            AF LL++ME+ KL P    Y  I   L +   +++A      M   G            
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG------------ 286

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P+ ++YS  I+  C+ GR+ DA ++  +  ++ I  +  T+  L++  +K  K
Sbjct: 287 -----IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 533 SI 534
            +
Sbjct: 342 LV 343


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 276/529 (52%), Gaps = 18/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P    YN ++  L K+ ++ +   L  +M  + + PNR TYN L+ GYCK+G 
Sbjct: 208 MKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQ 267

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  + + M      P + T+N L+NG C A M+EEA R+ +EME    +PD  TY T
Sbjct: 268 LEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTT 327

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L +   + G    +  L +E    G++    T +I++   CKEG ++KA ++++   ENG
Sbjct: 328 LFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENG 387

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  V +NT+++  C+ G++ +A+  ++ M   GL+ N +T N+++   C  K ++EA 
Sbjct: 388 LAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAE 447

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    ++G   +  +Y TLI GY R    +R  ++ +EM+++ + P+  +Y  +I  L
Sbjct: 448 KCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCL 507

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +     +A  +L +++  G++P+   +N +I G C  G+++ A +F ++MV +   P +
Sbjct: 508 CKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTL 567

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT NIL++GLC++G + +A         KG + D +TYN+LIS       ++ A  L   
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M++  + P   TY   H  +   G      K   ++VE  KI  +++Q N       + P
Sbjct: 628 MKKSGIKPTLNTY---HRLIAGCG------KEGLVLVE--KIYQEMLQMN-------LVP 669

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + Y+  I+ +   G  + A  +      +GI  +K TY  L+ G  K
Sbjct: 670 DRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFK 718



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 237/450 (52%), Gaps = 1/450 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T + +L+AL K+G + +  ++L    + GL P    +N +V+GYC++G + +A   ++ M
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM 418

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P+  TYN L+  +C    +EEA +  K+M    +LP+V TYNTLI+ +  S   
Sbjct: 419 EAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLF 478

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
              F++++E+++ G+KPN +++  +I   CK+  I +A  I+ +M   G  P+   YN L
Sbjct: 479 DRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNML 538

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID +C AG +++AFR  D M  + +    +T N +++ LC + K+ EA  L +  +++G 
Sbjct: 539 IDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y +LI+GY       +AL+L++ MK+  I P+  TY+ +I G  + G       
Sbjct: 599 SFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEK 657

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E+LQ  ++PD   +N +IH +   G V+KA   H+ M  +  +PD +T N L+ G  
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHF 717

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +EG + K         ++G    + TY+ LI   CK +  + A+    EM E    P   
Sbjct: 718 KEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVS 777

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGK 461
               + T L E GR  +A    S M   GK
Sbjct: 778 ICDNLITGLREEGRSHDADVICSEMNMKGK 807



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 276/561 (49%), Gaps = 53/561 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ +TYNT++D   K G+L E  ++   MK + + P   T+N L++G C+   ++EA RV
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV 309

Query: 68  VDLMTQNKSLPDVWTY-----------------------------------NMLINGWCN 92
           ++ M     +PD +TY                                   ++L+N  C 
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCK 369

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G +E+A  + K+     L P  V +NT++N + + G   +A+  I++++  G++PN VT
Sbjct: 370 EGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVT 429

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N ++K +C+   +++A K ++ M E G  P+  TYNTLID   ++   +  F++++ M 
Sbjct: 430 YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME 489

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           +KGLK N I+   +++ LC +  + EA ++L     RG   +   Y  LI G     K  
Sbjct: 490 KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLK 549

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A + +DEM  R+I+P+  TYN +I GL + GK  +A ++ +E+ + G+  D  T+N++I
Sbjct: 550 DAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLI 609

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G+ S G V+KAL+ +  M +   KP + T + L++G  +EG++    K ++  +     
Sbjct: 610 SGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEMLQMNLV 668

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D V YN LI    +   ++ A  L S ME + + PD+ TY  +     + GR+ + +  
Sbjct: 669 PDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNL 728

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
            + M   G I                 P + +Y   I  HC    +  A   + E  + G
Sbjct: 729 VNDMKIRGLI-----------------PKTETYDILIVGHCKLKDFDGAYVWYREMFENG 771

Query: 513 IAINKSTYMNLMNGLIKRRKS 533
              + S   NL+ GL +  +S
Sbjct: 772 FTPSVSICDNLITGLREEGRS 792



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 267/526 (50%), Gaps = 17/526 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LP   + N  L++L    +  +   L S++ + GL P++  Y   +    KLG 
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK A+ ++  M +    P V+ YN++I G C    +++A +L  EM   ++ P+ +TYNT
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G+  EAF + + +    ++P  +T N ++   C+   +++A +++  ME  G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD  TY TL D + K GN++ +  + +   RKG+++   T + +L+ LC E  +++A 
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    + G     V + T++ GY +    N+A    ++M+   + P+  TYN+++   
Sbjct: 378 EVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF 437

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +    E+A   + ++++ G++P+  T+NT+I G+      ++  Q   +M +K  KP++
Sbjct: 438 CEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNV 497

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++   L++ LC++  + +A       + +G   ++  YN LI   C   +L+DAF    E
Sbjct: 498 ISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDE 557

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  +++ P   TY  +   L + G++ EA+   S +   G                 +  
Sbjct: 558 MVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG-----------------LSF 600

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
             I+Y+  I+ + S G  + AL+++E  ++ GI    +TY  L+ G
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG 646



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 227/473 (47%), Gaps = 17/473 (3%)

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            + E+  +  LM ++  LP V + N+ +    +    E+  +L  E+    L PD   Y 
Sbjct: 127 MVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYG 186

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
             I    + G    A +L+  +   G+ P    +N++I   CKE ++  A K+   M + 
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P+ +TYNTLID  CK G +EEAF + + M  + ++   IT N++L+ LC  + ++EA
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L      G+  D  +Y TL  G+ +    + ++ L +E   + +    +T + ++  
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  E+A ++L + L++G+ P    FNTI++G+C  G + KA     KM     +P+
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+   C    +E+A K  +  + KG   +  TYNTLI    +    +  F +L 
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILE 486

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EME+K L P+  +Y  +   L +   + EA+     MV  G +                 
Sbjct: 487 EMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV----------------- 529

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P++  Y+  I+  C  G+ KDA + F+E   + I     TY  L+NGL K+ K
Sbjct: 530 PNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGK 582



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 192/403 (47%), Gaps = 17/403 (4%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ES    E+ +L   + + G+ P+  + N+ ++      + +   ++   + E+G  PD  
Sbjct: 124 ESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQF 183

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y   I A  K G+++ A  +M  M R G+       N ++  LC EK++ +A  L +  
Sbjct: 184 MYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEM 243

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             R    + ++Y TLI GY +  +   A  + + MK   + P+  T+N+++ GL ++   
Sbjct: 244 LDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMM 303

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A  +L E+   G +PD  T+ T+  G    G V+ ++    + V K  +    TC+IL
Sbjct: 304 EEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSIL 363

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L+ LC+EG +EKA +  + ++  G A   V +NT+++  C+   +  A+  + +ME   L
Sbjct: 364 LNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGL 423

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+  TY ++     E   +EEA+K    MVE G      V PN             +Y+
Sbjct: 424 RPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG------VLPNVE-----------TYN 466

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I+ +     +    QI EE  +KG+  N  +Y  L+N L K
Sbjct: 467 TLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCK 509



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 36/244 (14%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P  VTYN +++ L KKGK+ E  +L S++ ++GL  +  TYN L+SGY   G +++A+ 
Sbjct: 564 VPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALE 623

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M ++   P + TY+ LI G    G++    ++ +EM  + L+PD V YN LI+ + 
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYV 682

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA----------------- 169
           E G   +A  L   ++  GI+P+ +T+N +I  + KEG++ K                  
Sbjct: 683 EHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTE 742

Query: 170 ---------CKI---------VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                    CK+          R M ENGF+P     + LI    + G   +A  +   M
Sbjct: 743 TYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEM 802

Query: 212 GRKG 215
             KG
Sbjct: 803 NMKG 806



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 60/106 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TYN ++   FK+G++++V++L++DMK +GL+P   TY+IL+ G+CKL  
Sbjct: 697 MEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKD 756

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
              A      M +N   P V   + LI G    G   +A  +  EM
Sbjct: 757 FDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEM 802


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 274/544 (50%), Gaps = 18/544 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYN ++  L K G L+E       M K G+     TY++L++G  KL  
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  V+    +    P+   YN LI+G+C  G L +A R+R +M S  + P+ VT N+
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I  F + G+  +A  +++E+   G   N      +I W C   + + A + +R M    
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+     TL+   CK G   +A  +   +  KG   N +T N ++H LC    + EA 
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +RG+ LD+++Y TLI+G  ++ K     KL  EM ++ I P TFTYN +I G+
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK ++A+++ NE     ++P+  T+  +I G+C   ++E+  +   +++ ++ + + 
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N L+   CR G   +A K       KG    + TY++LI  +C   R+EDA  L+ E
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTPE 476
           M ++ L P+   Y A+     + G++++     Q+ +S  +   KI + V+    SK+ +
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751

Query: 477 --------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          I P +++Y+   N  C +G+ ++  +I +   Q+G+ +++ TY  
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTT 811

Query: 523 LMNG 526
           L++G
Sbjct: 812 LVHG 815



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 285/581 (49%), Gaps = 54/581 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T   +L +L K  +L +   +   M+ QG+ P+   ++  ++ +CK G +++A
Sbjct: 207 GVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDA 265

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++   M +    P+V TYN LI+G C  G L+EAFR +++M    +   ++TY+ LIN 
Sbjct: 266 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 325

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  +  EA  ++ E  E G  PN V +N +I  YCK G +  A +I  +M   G +P+
Sbjct: 326 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 385

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT N++I   CK G ME+A  +++ M  +G  +N     TI+H LC   + + A   L 
Sbjct: 386 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 445

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R    ++    TL+ G  ++ K + A++LW  + E+    +  T NA+I GL ++G
Sbjct: 446 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 505

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ +L ++L+ G + D+ T+NT+I G C EG+VE+  +   +MV++  +PD  T N
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 565

Query: 365 ILLSGLCREGILEKAL-----------------------------------KFFRSWILK 389
           +L+ G+CR G L++A+                                   K F   + +
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
              ++SV YNTLI + C+     +AF L  +M  K + P   TY+++   +   GR+E+A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685

Query: 450 QKFTSIMVETGKINH------------------QVVQPNTSKTPEEIDPSSISYSEKINE 491
           +     M + G + +                  +VV      +  +I P+ I+Y+  I+ 
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +   G  K A ++  E   KGI  +  TY  L NG  K  K
Sbjct: 746 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 182/334 (54%), Gaps = 2/334 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +GFG   + VT N ++  L K G + E   LL  M ++G V ++ TYN L+SG CK G +
Sbjct: 485 KGFGA--NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 542

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +E  ++   M +    PD +TYN+LI+G C  G L+EA  L  E +S  L+P+V TY  +
Sbjct: 543 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 602

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ + ++ +  E  KL  EL    ++ N+V +N +I+ YC+ G   +A K+  +M   G 
Sbjct: 603 IDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 662

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P   TY++LI   C  G ME+A  ++D M ++GL  N +    ++   C   ++D+   
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 722

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L   S    + ++++Y  +I GY +      A KL  EM  + I+P T TYN +  G  
Sbjct: 723 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           + GK E+   + + + Q G+  DE T+ T++HG+
Sbjct: 783 KEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 23/225 (10%)

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ---VEKALQFHNKMVEKSFKPDIVTCN 364
            A+  LNE+ +SG+       + +IH +C++ +      A+     +  K   P + TC 
Sbjct: 159 SAMADLNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCT 216

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LLS L +   LEK+   F + + +G + D   ++T I++ CK  ++EDA  L  +ME+ 
Sbjct: 217 FLLSSLVKANELEKSYWVFET-MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKL 275

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  TY  +   L + G L+EA +F   MV+ G                 ++ + I+
Sbjct: 276 GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG-----------------VNATLIT 318

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           YS  IN      ++ +A  + +ET +KG   N+  Y  L++G  K
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK 363



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 51/90 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +   P+ +TY  ++D   K G +     LL +M  +G+VP+  TYN+L +G+CK G 
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           ++E  ++ D M+Q     D  TY  L++GW
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVHGW 816


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 268/525 (51%), Gaps = 21/525 (4%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
             P  + ++ +L A+ K  K + V  L   M+  G+  N  TY+IL++ +C+   L  A+ 
Sbjct: 692  FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 751

Query: 67   VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            V+  M +    P++ T + L+NG+C++  + EA  L  +M      P+ VT+NTLI+  F
Sbjct: 752  VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 811

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
               ++ EA  LID +   G +P+ VT+ +++   CK G  D A  ++  ME+    P  +
Sbjct: 812  LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 871

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
             YNT+ID  CK  +M++A  +   M  KG++ N +T ++++  LC   +  +A  LL+  
Sbjct: 872  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931

Query: 247  SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +R    D  ++  LI  + ++ K   A KL+DEM +R I PS  TY+++I G     + 
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 307  EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            ++A  M   ++     PD  T+NT+I GFC   +VE+ ++   +M ++    + VT NIL
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 367  LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
            + GL + G  + A + F+  +  G   + +TYNTL+  LCK  +LE A  +   ++  K+
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111

Query: 427  GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             P  YTY  +   + ++G++E+       +   G                 + P  ++Y+
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-----------------VKPDVVAYN 1154

Query: 487  EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
              I+  C +G  ++A  +F+E ++ G   N   Y    N LI+ R
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY----NTLIRAR 1195



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 243/460 (52%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  P+ VT +++L+      +++E   L+  M   G  PN  T+N L+ G      
Sbjct: 756  MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 815

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              EAM ++D M      PD+ TY +++NG C  G  + AF L  +ME  KL P V+ YNT
Sbjct: 816  ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +I+   +     +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E  
Sbjct: 876  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             +PD  T++ LIDA  K G + EA ++ D M ++ +  + +T +++++  C   +LDEA 
Sbjct: 936  INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +      +  + D V+Y TLI G+ + ++    ++++ EM +R ++ +T TYN +I GL
Sbjct: 996  QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 1055

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             Q+G  + A ++  E++  G+ P+  T+NT++ G C  G++EKA+     +     +P I
Sbjct: 1056 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 1115

Query: 361  VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             T NI++ G+C+ G +E     F +  LKG   D V YNT+IS  C++   E+A  L  E
Sbjct: 1116 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 1175

Query: 421  MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            M+E    P+   Y  +  A +  G  E + +    M   G
Sbjct: 1176 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 237/445 (53%), Gaps = 1/445 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+ VT+NT++  LF   K +E   L+  M  +G  P+  TY ++V+G CK G    A
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +++ M Q K  P V  YN +I+G C    +++A  L KEME+  + P+VVTY++LI+ 
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                GR  +A +L+ ++ E  I P+  T + +I  + KEGK+ +A K+   M +    P 
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             VTY++LI+  C    ++EA +M + M  K    + +T NT++   C  K+++E   +  
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              S+RG   + V+Y  LI G F+    + A +++ EM    + P+  TYN ++ GL ++G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            K E+A+ +   L +S M P   T+N +I G C  G+VE        +  K  KPD+V  N
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             ++SG CR+G  E+A   F+     G   +S  YNTLI +  ++   E +  L+ EM   
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 1214

Query: 425  KLGPDRYTYAAIHTALVESGRLEEA 449
                D  T   + T ++  GRL+++
Sbjct: 1215 GFAGDASTIGLV-TNMLHDGRLDKS 1238



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/584 (27%), Positives = 268/584 (45%), Gaps = 69/584 (11%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G + + VTYNT++   F+ G +++ ++  S M   G+ P+  TYNIL+ G C  G 
Sbjct: 459  MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L++A+ + + M + +   D+ TY  +I G C  G +EEA+ L   +    L PD+VTY T
Sbjct: 519  LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN----------IMIKWYC--------- 161
            +++     G   E   L  ++ + G+  N  T +          I     C         
Sbjct: 579  MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKD 638

Query: 162  -KEGKIDKACKIVR------------NMEENGFS--------------------PDCVTY 188
             K G   KA  ++R             +  NG S                    P  + +
Sbjct: 639  IKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEF 698

Query: 189  NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            + L+ A  K    +    + + M   G+  N  T + +++  C   +L  A  +L    K
Sbjct: 699  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 758

Query: 249  RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
             GY  + V+  +L+ GY   ++ + A+ L D+M      P+T T+N +I GL    K  +
Sbjct: 759  LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 818

Query: 309  AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            A+ +++ ++  G  PD  T+  +++G C  G  + A    NKM +   +P ++  N ++ 
Sbjct: 819  AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 878

Query: 369  GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            GLC+   ++ AL  F+    KG   + VTY++LIS LC   R  DA  LLS+M E+K+ P
Sbjct: 879  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 938

Query: 429  DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
            D +T++A+  A V+ G+L EA+K    MV+                   IDPS ++YS  
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVK-----------------RSIDPSIVTYSSL 981

Query: 489  INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            IN  C   R  +A Q+FE    K    +  TY  L+ G  K ++
Sbjct: 982  INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 277/563 (49%), Gaps = 39/563 (6%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V +N +L A+ K  K + V  L   M+  G+  +  T+NI+++ +C    +  A+ 
Sbjct: 185 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 244

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    PD  T   L+NG+C    + +A  L  +M  +   PD+V YN +I+   
Sbjct: 245 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 304

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++ R  +AF    E++  GI+PN VT+  ++   C   +   A +++ +M +   +P+ +
Sbjct: 305 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 364

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY+ L+DA  K G + EA  + + M R  +  + +T +++++ LC   ++DEA  + +  
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 424

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   D VSY TLI G+ + ++    +KL+ EM +R ++ +T TYN +I G  Q+G  
Sbjct: 425 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 484

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A +  +++   G+ PD  T+N ++ G C  G++EKAL     M ++    DIVT   +
Sbjct: 485 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 544

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E+A   F S  LKG   D VTY T++S LC +  L +   L ++M+++ L
Sbjct: 545 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604

Query: 427 GPDRYT--------------------YAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
             +  T                    YA      ++SG  ++A   + +   +GK ++  
Sbjct: 605 MKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKA--LSLLRAFSGKTSYDY 662

Query: 467 VQPNTSKTPEEID-----------------PSSISYSEKINEHCSQGRYKDALQIFEETR 509
            +  +     E+                  PS I +S+ ++      ++   + + E+ +
Sbjct: 663 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 722

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
             GI  N  TY  L+N   +R +
Sbjct: 723 NLGIPHNHYTYSILINCFCRRSQ 745



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 224/439 (51%), Gaps = 6/439 (1%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DVW 81
           KLN+  DL SDM K    P+   +N L+S   K   LK+   V+ L  + + L    D++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVK---LKKYDVVISLGKKMEVLGIRNDLY 224

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N++IN +C    +  A  +  +M  L   PD VT  +L+N F    R  +A  L+D++
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            E G KP+ V +N +I   CK  +++ A    + +E  G  P+ VTY  L++  C +   
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            +A R++  M +K +  N IT + +L       K+ EA  L     +     D V+Y +L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G    ++ + A +++D M  +  +    +YN +I G  ++ + E  + +  E+ Q G+
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           + +  T+NT+I GF   G V+KA +F ++M      PDI T NILL GLC  G LEKAL 
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F     +   +D VTY T+I  +CK  ++E+A+ L   +  K L PD  TY  + + L 
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 584

Query: 442 ESGRLEEAQKFTSIMVETG 460
             G L E +   + M + G
Sbjct: 585 TKGLLHEVEALYTKMKQEG 603



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 280/574 (48%), Gaps = 38/574 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T+N +++      +++    +L  M K G  P+R T   LV+G+C+   
Sbjct: 214 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 273

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +VD M +    PD+  YN +I+  C    + +AF   KE+E   + P+VVTY  
Sbjct: 274 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 333

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N    S R  +A +L+ ++ +  I PN +T++ ++  + K GK+ +A ++   M    
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY++LI+  C    ++EA +M D+M  KG   + ++ NT+++  C  K++++  
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G+F+    ++A + + +M    I P  +TYN ++ GL
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G+ E+A+ +  ++ +  M  D  T+ T+I G C  G+VE+A      +  K  KPDI
Sbjct: 514 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 573

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN----TLISSLCKE-------- 408
           VT   ++SGLC +G+L +    +     +G   +  T +    TL + L K+        
Sbjct: 574 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 633

Query: 409 RRLED--------AFGLLSEMEEK-------KLGPDRYTYAAIHTALVESGRLEEAQKFT 453
             L+D        A  LL     K       KL  +  +   +  A+   G + +++ F 
Sbjct: 634 SLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFP 693

Query: 454 SIMVETGKINHQVVQPN----TSKTPEEIDPSSI-----SYSEKINEHCSQGRYKDALQI 504
           SI +E  K+   + + N         E++    I     +YS  IN  C + +   AL +
Sbjct: 694 SI-IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             +  + G   N  T  +L+NG     K IS+AV
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYC-HSKRISEAV 785



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 161/600 (26%), Positives = 276/600 (46%), Gaps = 76/600 (12%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ +TY+ +LDA  K GK+ E ++L  +M +  + P+  TY+ L++G C    + EA ++
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 420

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            DLM     L DV +YN LING+C A  +E+  +L +EM    L+ + VTYNTLI  FF+
Sbjct: 421 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 480

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-------- 179
           +G   +A +   ++D  GI P+  T+NI++   C  G+++KA  I  +M++         
Sbjct: 481 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 540

Query: 180 ---------------------------GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                      G  PD VTY T++   C  G + E   +   M 
Sbjct: 541 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600

Query: 213 RKGLKMNTITLNTILHTLCCE---KKLDEAYM------LLNSASKRGYYLDEVSYGTLIT 263
           ++GL  N  TL+    TL  E   K L   Y       + +   K+   L     G   T
Sbjct: 601 QEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGK--T 658

Query: 264 GYFRDEKANR----------ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
            Y   EK +R          A+ L+ EM + +  PS   ++ ++  +++  K +  I + 
Sbjct: 659 SYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 718

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            ++   G+  +  T++ +I+ FC   Q+  AL    KM++  ++P+IVT + LL+G C  
Sbjct: 719 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 778

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             + +A+       + G   ++VT+NTLI  L    +  +A  L+  M  K   PD  TY
Sbjct: 779 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 838

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------------------SKT 474
             +   L + G  + A    + M E GK+   V+  NT                      
Sbjct: 839 GVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 897

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            + I P+ ++YS  I+  C+ GR+ DA ++  +  ++ I  +  T+  L++  +K  K +
Sbjct: 898 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 957



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 217/411 (52%), Gaps = 1/411 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC PD VTY  +++ L K+G  +   +LL+ M++  L P    YN ++ G CK   + +A
Sbjct: 830  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +   M      P+V TY+ LI+  CN G   +A RL  +M   K+ PDV T++ LI+ 
Sbjct: 890  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F + G+ +EA KL DE+ +  I P+ VT++ +I  +C   ++D+A ++   M      PD
Sbjct: 950  FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             VTYNTLI   CK   +EE   +   M ++GL  NT+T N ++  L      D A  +  
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                 G   + ++Y TL+ G  ++ K  +A+ +++ ++  ++ P+ +TYN MI G+ ++G
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            K E   D+   L   G+ PD   +NT+I GFC +G  E+A     +M E    P+    N
Sbjct: 1130 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 1189

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             L+    R+G  E + +  +     G A D+ T   L++++  + RL+ +F
Sbjct: 1190 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 1239



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 149/580 (25%), Positives = 270/580 (46%), Gaps = 69/580 (11%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNI-------------- 50
            G  PD VTY T++  L  KG L+EV  L + MK++GL+ N  T +               
Sbjct: 568  GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKML 627

Query: 51   -----------LVSGYCKLGW---------------------------LKEAMRVVDLMT 72
                       + SG CK                              L +A+ +   M 
Sbjct: 628  SCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMV 687

Query: 73   QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
            +++  P +  ++ L++        +    L ++M++L +  +  TY+ LIN F    +  
Sbjct: 688  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 747

Query: 133  EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
             A  ++ ++ + G +PN VT + ++  YC   +I +A  +V  M   G+ P+ VT+NTLI
Sbjct: 748  LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807

Query: 193  DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
                      EA  ++D M  KG + + +T   +++ LC     D A+ LLN   +    
Sbjct: 808  HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867

Query: 253  LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
               + Y T+I G  + +  + AL L+ EM+ + I P+  TY+++I  L   G+   A  +
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 313  LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            L+++++  + PD  TF+ +I  F  EG++ +A + +++MV++S  P IVT + L++G C 
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 373  EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
               L++A + F   + K    D VTYNTLI   CK +R+E+   +  EM ++ L  +  T
Sbjct: 988  HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047

Query: 433  YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
            Y  +   L ++G  + AQ+    MV  G                 + P+ ++Y+  ++  
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDG-----------------VPPNIMTYNTLLDGL 1090

Query: 493  CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C  G+ + A+ +FE  ++  +     TY  ++ G+ K  K
Sbjct: 1091 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 229/459 (49%), Gaps = 17/459 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  +N L++        +    L K+ME L +  D+ T+N 
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F    +   A  ++ ++ + G +P+ VT   ++  +C+  ++  A  +V  M E G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD V YN +ID+ CK   + +AF     + RKG++ N +T   +++ LC   +  +A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   K+    + ++Y  L+  + ++ K   A +L++EM    I P   TY+++I GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               + ++A  M + ++  G + D  ++NT+I+GFC   +VE  ++   +M ++    + 
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L+ G  + G ++KA +FF      G + D  TYN L+  LC    LE A  +  +
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+++++  D  TY  +   + ++G++EEA      +   G                 + P
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-----------------LKP 571

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             ++Y+  ++  C++G   +   ++ + +Q+G+  N  T
Sbjct: 572 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 190/345 (55%), Gaps = 1/345 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G  P+ VTY++++  L   G+ ++   LLSDM ++ + P+  T++ L+  + K G 
Sbjct: 896  METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA ++ D M +    P + TY+ LING+C    L+EA ++ + M S    PDVVTYNT
Sbjct: 956  LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI  F +  R  E  ++  E+ + G+  N VT+NI+I+   + G  D A +I + M  +G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              P+ +TYNTL+D  CK G +E+A  + + + R  ++    T N ++  +C   K+++ +
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 1135

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L  + S +G   D V+Y T+I+G+ R      A  L+ EMKE   +P++  YN +I   
Sbjct: 1136 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 1195

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             + G  E + +++ E+   G   D +T   ++     +G+++K+ 
Sbjct: 1196 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 1239



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 180/389 (46%), Gaps = 18/389 (4%)

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           ++ K++ A  +  +M ++   P  V +N L+ A  K    +    +   M   G++ +  
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +++  CC  ++  A  +L    K GY  D V+ G+L+ G+ R  + + A+ L D+M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            E    P    YNA+I  L ++ +   A D   E+ + G+ P+  T+  +++G C+  + 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             A +  + M++K   P+++T + LL    + G + +A + F   +      D VTY++L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I+ LC   R+++A  +   M  K    D  +Y  +     ++ R+E+  K    M + G 
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 462 INHQVV---------QPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQ 503
           +++ V          Q       +E         I P   +Y+  +   C  G  + AL 
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           IFE+ +++ + ++  TY  ++ G+ K  K
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGK 553


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 243/460 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+N ++D L K+G L E R LL+ MK  G  P+  TYN L+ GY K G L+E  ++
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  M      PDV TYN L+N +C  G +E A+    EM+   ++ +VVT++T ++ F +
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   EA KL  ++   G+KPN VT+  ++   CK G++D A  +   M + G   + VT
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CK G + EA  +  +M R G++ N +   T++H     K  + A  LL+   
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  LD   YG LI G    +K + A  L ++M E  + P+   Y  ++    ++ K  
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKES 491

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +AI +L +++ SG  P+  T+  ++ G C  G +++A+   NKMV+   +P++     L+
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G L+KA+      I KG ++D+V   +L+    K+  L+DAF L ++M    L 
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQ 611

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            D Y Y            ++EA++  S M+E G     VV
Sbjct: 612 LDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 235/449 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD VTYN+++D   K G+L EV  L+ +M+  G  P+  TYN LV+ +CK G 
Sbjct: 220 MKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGR 279

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A      M +   + +V T++  ++ +C  GM+ EA +L  +M    + P+ VTY  
Sbjct: 280 MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTC 339

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++GR  +A  L +E+ + G+  N VT+ +++   CKEGK+ +A  + R ME  G
Sbjct: 340 LVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + Y TLI  +    N E A  ++  M  KG++++      ++  LC  +KLDEA 
Sbjct: 400 IRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAK 459

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   + G   + V Y  ++   F+  K + A+ L  +M +    P+  TY A++ GL
Sbjct: 460 SLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGL 519

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  ++AI   N+++  G+ P+   +  ++ G C  G+++KA+   ++M++K    D 
Sbjct: 520 CKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDN 579

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V C  L+ G  ++G L+ A       I  G  +D   Y   +   C    +++A  +LSE
Sbjct: 580 VVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSE 639

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M E  + PD   Y  +     + G +EEA
Sbjct: 640 MIENGITPDAVVYNCLINKCQKLGNMEEA 668



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 210/422 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC PD VTYN +++   K G++       ++MK++G++ N  T++  V  +CK G 
Sbjct: 255 MRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGM 314

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EAM++   M      P+  TY  L++G C AG L++A  L  EM    +  +VVTY  
Sbjct: 315 VREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTV 374

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + G+  EA  +   ++  GI+ N + +  +I  +      ++A  ++  M++ G
Sbjct: 375 LVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKG 434

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   Y  LI   C    ++EA  +++ M   GLK N +    I+      +K  EA 
Sbjct: 435 MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAI 494

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G+  + V+Y  L+ G  +    + A+  +++M +  + P+   Y A++ GL
Sbjct: 495 ALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ ++A+ +L+E++  GM  D     +++ G   +G ++ A     KM+    + D+
Sbjct: 555 CKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDL 614

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                 + G C   ++++A +     I  G   D+V YN LI+   K   +E+A  L +E
Sbjct: 615 YGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNE 674

Query: 421 ME 422
           ME
Sbjct: 675 ME 676



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 249/523 (47%), Gaps = 28/523 (5%)

Query: 15  TILDALFKKGKLNEVRDLLSDMKKQG---LVPNRT----TYNILVSGYCKLGWLKEAMRV 67
           ++L  L   G    +   L D+  +    L P R+      + L+S     G L +A+  
Sbjct: 91  SLLSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLA 150

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + + +  P+  T N ++         E A+RL +++ +    P+V T+N +I+   +
Sbjct: 151 LARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCK 206

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA  L+  +   G  P+ VT+N +I  Y K G++++  K+V  M   G  PD VT
Sbjct: 207 EGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVT 266

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L++  CK G ME A+     M R+G+  N +T +T +   C    + EA  L     
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMR 326

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   +EV+Y  L+ G  +  + + AL L +EM ++ +  +  TY  ++ GL + GK  
Sbjct: 327 MKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVA 386

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A D+   + ++G+  +E  + T+IHG       E+AL   ++M +K  + D+     L+
Sbjct: 387 EAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALI 446

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC    L++A          G   ++V Y  ++ +  K R+  +A  LL +M +    
Sbjct: 447 WGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFR 506

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  TY A+   L ++G ++EA    + MV+ G                 ++P+  +Y+ 
Sbjct: 507 PNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG-----------------LEPNVQAYTA 549

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            ++  C  GR   A+ + +E   KG++++     +LM+G +K+
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQ 592



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 206/445 (46%), Gaps = 25/445 (5%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
           LP VV  +TL++   + G   +A   +  + E  + PN  T N ++    +E   + A +
Sbjct: 127 LPSVV--DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWR 184

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           +   +     +P+  T+N +ID  CK G++ EA  ++  M   G   + +T N+++    
Sbjct: 185 LFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYG 240

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              +L+E   L+      G   D V+Y  L+  + +  +  RA   + EMK   +M +  
Sbjct: 241 KCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVV 300

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T++  +    ++G   +A+ +  ++   GM P+E T+  ++ G C  G+++ AL   N+M
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           V++    ++VT  +L+ GLC+EG + +A   FR     G   + + Y TLI      +  
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN- 470
           E A  LLSEM++K +  D   Y A+   L    +L+EA+   + M E G   + V+  N 
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480

Query: 471 ------TSKTPEEID-----------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                   K  E I            P+ ++Y   ++  C  G   +A+  F +    G+
Sbjct: 481 MDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGL 540

Query: 514 AINKSTYMNLMNGLIKRRKSISKAV 538
             N   Y  L++GL K  + + KAV
Sbjct: 541 EPNVQAYTALVDGLCKNGR-LDKAV 564



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 22/259 (8%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           ++E ++ P+T T N ++  L++   +E A  +  +L      P+  TFN +I   C EG 
Sbjct: 154 VRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGD 209

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           + +A     +M      PD+VT N L+ G  + G LE+  K        G   D VTYN 
Sbjct: 210 LAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNA 269

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L++  CK  R+E A+   +EM+ + +  +  T++    A  ++G + EA K  + M   G
Sbjct: 270 LVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKG 329

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            + P+ ++Y+  ++  C  GR  DAL +  E  Q+G+ +N  TY
Sbjct: 330 -----------------MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372

Query: 521 MNLMNGLIKRRKSISKAVD 539
             L++GL K  K +++A D
Sbjct: 373 TVLVDGLCKEGK-VAEAED 390



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 52/101 (51%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           DNV   +++D   K+G L +   L + M   GL  +   Y   V G+C L  ++EA  V+
Sbjct: 578 DNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVL 637

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
             M +N   PD   YN LIN     G +EEA  L+ EMESL
Sbjct: 638 SEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 261/521 (50%), Gaps = 18/521 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +TYN ++D   ++G + +   +  +M   G+  N   +N L++G CK G +++A
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M +    PD  TY++LI G C    +  AF L  EM+  KL P V+TY+ +IN 
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G       ++ E+  +G+KPNAV +  ++  + KEG+++++  I+  M E G  PD
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN+LI   CKA  MEEA   +  M  + L+ N  T    +       +++ A    N
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 545

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +   Y  LI G+ ++     A  ++  +  R+++    TY+ +I GLS++G
Sbjct: 546 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 605

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K  +A  + +EL + G++P+  T+N++I G C +G V+KA Q   +M  K   PDIVT N
Sbjct: 606 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 665

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ GLC+ G +E+A   F     +G   + VTY  ++   CK +    AF LL EM  +
Sbjct: 666 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD + Y  I     +  + E+A      M+E G                    S++S
Sbjct: 726 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF------------------ASTVS 767

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
           ++  I  +C  G+ ++A  + EE  +K    N  TY +L++
Sbjct: 768 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 808



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 277/541 (51%), Gaps = 34/541 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  ++ N++L  L K  K+     +   M    ++P+  TY  ++S +CK+G +K+A RV
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246

Query: 68  VDLMTQNKSL-----------------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           +  M +   L                 PD++TY++LING+C      EA  +  EM  + 
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P+ +TYN LI+ F   G   +AF++ DE+   GI+ N +  N ++   CK GK++KA 
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 366

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           +I++ M E G  PD  TY+ LI+ +C+  NM  AF ++D M ++ L    +T + I++ L
Sbjct: 367 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C    L     +L      G   + V Y TL+T + ++ +   +  + + M+E+ I+P  
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           F YN++I G  ++ + E+A   L E+L+  + P+  T+   I G+   G++E A ++ N+
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M+     P++     L+ G C+EG + +A   FR  + +    D  TY+ LI  L +  +
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           + +AFG+ SE++EK L P+ +TY ++ +   + G +++A +    M   G          
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG---------- 656

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  I+P  ++Y+  I+  C  G  + A  +F++   +G+  N  TY  +++G  K 
Sbjct: 657 -------INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 709

Query: 531 R 531
           +
Sbjct: 710 K 710



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 276/566 (48%), Gaps = 54/566 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + +NT+L+ + K GK+ +  +++ +M ++G+ P+  TY++L+ G+C+   +  A  ++D 
Sbjct: 347 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 406

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M + K  P V TY+++ING C  G L+    + +EM    L P+ V Y TL+    + GR
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 466

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             E+  +++ + E GI P+   +N +I  +CK  ++++A   +  M E    P+  TY  
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
            ID   KAG ME A R  + M   G+  N      ++   C E  + EA+ +      R 
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  +Y  LI G  R+ K + A  ++ E++E+ ++P+ FTYN++I G  + G  ++A 
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 646

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA-------------------------- 344
            +L E+   G+ PD  T+N +I G C  G++E+A                          
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 706

Query: 345 ---------LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                     Q   +M+ +   PD    N++L+  C+E   EKAL  F+  + KG A  +
Sbjct: 707 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-ST 765

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK---- 451
           V++NTLI   CK  +L++A  LL EM EK+  P+  TY ++     ++G + EA++    
Sbjct: 766 VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLE 825

Query: 452 ------------FTSIMVETGKINH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
                       +TS++     I +  +V         + I+P  ++Y   I+ +C +G 
Sbjct: 826 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 885

Query: 498 YKDALQIFEETRQKGIAINKSTYMNL 523
             +A ++ +E   KG+ +     + L
Sbjct: 886 VMEACKLKDEILVKGMPMKSGFRLGL 911



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/468 (32%), Positives = 239/468 (51%), Gaps = 11/468 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD   YN+++    K  ++ E R  L +M ++ L PN  TY   + GY K G ++ A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R  + M     LP+V  Y  LI G C  G + EAF + + + S ++L DV TY+ LI+ 
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G+  EAF +  EL E G+ PNA T+N +I   CK+G +DKA +++  M   G +PD
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LID  CKAG +E A  + D +  +GL  N +T   ++   C  K    A+ LL 
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG   D   Y  ++    ++EK  +AL L+ EM E+    ST ++N +I G  +SG
Sbjct: 721 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSG 779

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A  +L E+++   IP+  T+ ++I   C  G + +A +   +M E++  P   T  
Sbjct: 780 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL G    G + +    F   + KG   D +TY  +I + C+E  + +A  L  E+  K
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 899

Query: 425 --------KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
                   +LG    T + I      +G ++EA +    MV+ G +++
Sbjct: 900 GMPMKSGFRLGLP--TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 945



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 222/461 (48%), Gaps = 47/461 (10%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P+ V ++ L++ + + G  +EA  +         +P+ ++ N ++    K  K++   K+
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-----------------KG 215
              M  +   PD  TY  +I A+CK GN+++A R++  MG                  KG
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L  +  T + +++  C EK+  EA ++L      G   + ++Y  LI G+ R     +A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           ++ DEM    I  +   +N ++ G+ ++GK E+A++++ E+++ G+ PD  T++ +I G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C    + +A +  ++M ++   P ++T +++++GLCR G L+      R  ++ G   ++
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           V Y TL+++  KE R+E++  +L  M E+ + PD + Y ++     ++ R+EEA+ +   
Sbjct: 452 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511

Query: 456 MVETGKINHQVVQPNTSKTPEEID------------------------PSSISYSEKINE 491
           M+E      + ++PN       ID                        P+   Y+  I  
Sbjct: 512 MLE------RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 565

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           HC +G   +A  +F     + +  +  TY  L++GL +  K
Sbjct: 566 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 126/229 (55%), Gaps = 7/229 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   YN IL+   K+ K  +  DL  +M ++G   +  ++N L+ GYCK G L+EA
Sbjct: 726 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEA 784

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M + + +P+  TY  LI+  C AGM+ EA RL  EM+   ++P   TY +L++ 
Sbjct: 785 NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG 844

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK-----IVRNME-E 178
           +   G   E   L +E+   GI+P+ +T+ +MI  YC+EG + +ACK     +V+ M  +
Sbjct: 845 YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMK 904

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +GF     T + +      AGNM+EA  ++  M + G   NT +L  ++
Sbjct: 905 SGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 953



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 7/270 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG G  P+ VTY  ++D   K         LL +M  +G+ P+   YN++++  CK   
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 746

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A+ +   M + K      ++N LI G+C +G L+EA  L +EM   + +P+ VTY +
Sbjct: 747 FEKALDLFQEMLE-KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G   EA +L  E+ E  + P A T+  ++  Y   G + +   +   M   G
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT------ITLNTILHTLCCEK 234
             PD +TY  +IDA C+ GN+ EA ++ D +  KG+ M +       T + I        
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAG 925

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            +DEA  +L S  K G+  +  S G L+ G
Sbjct: 926 NMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 231/416 (55%), Gaps = 3/416 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD ++YN ++      G+L+  R L++ M  +   P+  TYN L+ G C  G    A+
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNAL 172

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+D M +   +PDV TY +L+   C     ++A +L  EM      PD+VTYN ++N  
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + GR  +A + +  L  +G +PN V++NI++K  C   + + A K++  M   G  P+ 
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VT+N LI   C+ G +E A  ++D + + G   N+++ N ILH  C +KK+D A   +  
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 352

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G Y D VSY TL+T   R  + + A++L  ++K++   P   +YN +I GL+++GK
Sbjct: 353 MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           TE+A+++LNE++  G+ PD  T++TI  G C EG++E+A++   K+ +   +P+ V  N 
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNA 472

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           +L GLC+      A+  F   +  G   +  TY  LI  L  E  +++A  +++E+
Sbjct: 473 ILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 239/453 (52%), Gaps = 12/453 (2%)

Query: 19  ALFKK----GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN 74
           AL KK    G+  E R +L+  +     P+  +YN +V+GYC  G L  A R+V  M   
Sbjct: 95  ALIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMPME 149

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
              PD +TYN LI G C  G  + A  +  +M     +PDVVTY  L+    +     +A
Sbjct: 150 ---PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 206

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            KL+DE+ + G  P+ VT+N+++   C+EG++D A + ++++   G  P+ V+YN ++  
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C A   E+A ++M  M RKG   N +T N ++  LC    ++ A  +L+   K G   +
Sbjct: 267 LCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
            +SY  ++  + + +K +RA+   + M      P   +YN ++  L + G+ + A+++L+
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           +L   G  P   ++NT+I G    G+ E+AL+  N+MV K  +PDI+T + + SGLCREG
Sbjct: 387 QLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREG 446

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +E+A+K F      G   ++V YN ++  LCK R    A  L + M      P+  TY 
Sbjct: 447 RIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYT 506

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            +   L   G ++EA++  + +   G ++  +V
Sbjct: 507 ILIEGLAYEGLVKEAREMMAELCSRGVVSKTLV 539



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 245/487 (50%), Gaps = 27/487 (5%)

Query: 42  VPNRTTY-NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF 100
           VP+R+   N  +    + G L+EA+R+V+ M   +          LI   C +G   EA 
Sbjct: 52  VPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEP-SAAGPCAALIKKLCASGRTAEAR 110

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
           R+    E     PDV++YN ++  +  +G+   A +L+  +    ++P+  T+N +I+  
Sbjct: 111 RVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGL 162

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           C  G+ D A  ++ +M   G  PD VTY  L++A CK    ++A +++D M  KG   + 
Sbjct: 163 CGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDI 222

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +T N +++ +C E ++D+A   L S    G   + VSY  ++ G    E+   A KL  E
Sbjct: 223 VTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 282

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  +   P+  T+N +I  L + G  E A+++L+++ + G  P+  ++N I+H FC + +
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           +++A+ F   MV     PDIV+ N LL+ LCR G ++ A++       KG     ++YNT
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +I  L K  + E+A  LL+EM  K L PD  TY+ I + L   GR+EEA K         
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFC------ 456

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           K+    ++PNT           + Y+  +   C +     A+ +F      G   N+STY
Sbjct: 457 KVQDMGIRPNT-----------VLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTY 505

Query: 521 MNLMNGL 527
             L+ GL
Sbjct: 506 TILIEGL 512



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 202/383 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT++  L  +G+ +    +L DM ++G VP+  TY IL+   CK    K+A+++
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD+ TYN+++NG C  G +++A    K + S    P+ V+YN ++     
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +A KL+ E+   G  PN VT N++I + C+ G ++ A +I+  + + G +P+ ++
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN ++ A CK   M+ A   +++M   G   + ++ NT+L  LC   ++D A  LL+   
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G     +SY T+I G  +  K   AL+L +EM  + + P   TY+ +  GL + G+ E
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +AI    ++   G+ P+   +N I+ G C       A+     MV     P+  T  IL+
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 368 SGLCREGILEKALKFFRSWILKG 390
            GL  EG++++A +       +G
Sbjct: 510 EGLAYEGLVKEAREMMAELCSRG 532



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 199/352 (56%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+PD VTY  +L+A  K+    +   LL +M+ +G  P+  TYN++V+G C+ G + +A
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA 241

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M  +  +      P+  +YN+++ G C A   E+A +L  EM      P+VVT+N LI+ 
Sbjct: 242 MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    A +++D++ ++G  PN++++N ++  +CK+ K+D+A   V  M  +G  PD
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTL+ A C+ G ++ A  ++  +  KG     I+ NT++  L    K +EA  LLN
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D ++Y T+ +G  R+ +   A+K + ++++  I P+T  YNA++ GL +  
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRR 481

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            T  AID+   ++ +G +P+E+T+  +I G   EG V++A +   ++  +  
Sbjct: 482 ATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 222/447 (49%), Gaps = 29/447 (6%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVV-TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
           G LEEA RL + M  L+  P        LI +   SGR+ EA +++   +     P+ ++
Sbjct: 70  GDLEEAIRLVESMAGLE--PSAAGPCAALIKKLCASGRTAEARRVLASCE-----PDVMS 122

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N M+  YC  G++D A ++V  M      PD  TYNTLI   C  G  + A  ++D M 
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDML 179

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           R+G   + +T   +L   C      +A  LL+    +G   D V+Y  ++ G  ++ + +
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVD 239

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A++    +      P+T +YN ++ GL  + + E A  ++ E+ + G  P+  TFN +I
Sbjct: 240 DAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLI 299

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
              C  G VE A++  +++ +    P+ ++ N +L   C++  +++A+ F    +  G  
Sbjct: 300 SFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCY 359

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D V+YNTL+++LC+   ++ A  LL ++++K   P   +Y  +   L ++G+ EEA + 
Sbjct: 360 PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALEL 419

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
            + MV  G                 + P  I+YS   +  C +GR ++A++ F + +  G
Sbjct: 420 LNEMVTKG-----------------LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462

Query: 513 IAINKSTYMNLMNGLIKRRKSISKAVD 539
           I  N   Y  ++ GL KRR + S A+D
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHS-AID 488



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 154/322 (47%), Gaps = 35/322 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +GC P+ V+YN +L  L    +  +   L+++M ++G  PN  T+N+L+S  C+ G 
Sbjct: 248 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGL 307

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ AM ++D + +    P+  +YN +++ +C    ++ A    + M S    PD+V+YNT
Sbjct: 308 VEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNT 367

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      G    A +L+ +L + G  P  +++N +I    K GK ++A +++  M   G
Sbjct: 368 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG 427

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY+T+    C+ G +EEA +    +   G++ NT+  N IL  LC         
Sbjct: 428 LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC--------- 478

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                                     +    + A+ L+  M     MP+  TY  +I GL
Sbjct: 479 --------------------------KRRATHSAIDLFTYMVSNGCMPNESTYTILIEGL 512

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
           +  G  ++A +M+ EL   G++
Sbjct: 513 AYEGLVKEAREMMAELCSRGVV 534


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 163/585 (27%), Positives = 289/585 (49%), Gaps = 70/585 (11%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YNT+L++L + G ++E++ +  +M +  + PN  TYN +V+GYCK+G ++EA + V ++ 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-------------------------- 106
           +    PD +TY  LI G+C    L+ AF++ KEM                          
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 107 ESLKLL---------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           E++ L          P V TY  LI     S R  EA  L+ E++E GIKPN  T+ ++I
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              C + K++KA +++  M E G  P+ +TYN LI+  CK G +E+A  ++++M  + L+
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 218 MNT----------------------------------ITLNTILHTLCCEKKLDEAYMLL 243
            NT                                  +T N+++   C     D AY LL
Sbjct: 426 PNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  + RG   D  +Y ++I    + ++   A  L+D ++++ ++P+   Y A+I G  ++
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A  ML ++L    +P+  TFN +IHG C++G++++A     KMV+   +P + T 
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            IL+  L ++G  + A + F+  +  G   D+ TY T I + C+E RL+DA  ++++M+E
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD +TY+++     + GR   A      M +TG    Q    +  K   E+    +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKV 725

Query: 484 SYSEK-INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              E  +    +   +   +++ E+  + G+  N  +Y  LM G+
Sbjct: 726 KGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGI 770



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 222/474 (46%), Gaps = 53/474 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY  ++D+L  + KL + R+LL  M ++GL+PN  TYN L++GYCK G 
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 61  LKEAMRVVDLM----------------------------------TQNKSLPDVWTYNML 86
           +++A+ VV+LM                                   + K LPDV TYN L
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           I+G C +G  + A+RL   M    L+PD  TY ++I+   +S R  EA  L D L++  +
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDV 528

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            PN V +  +I  YCK GK+++A  ++  M      P+ +T+N LI   C  G ++EA  
Sbjct: 529 IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATL 588

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           + + M +  L+    T   ++H L  +   D AY         G   D  +Y T I  Y 
Sbjct: 589 LEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R+ +   A  +  +MKE  + P  FTY+++I G    G+T  A  +L  +  +G  P + 
Sbjct: 649 REGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQH 708

Query: 327 TFNTIIH---------------GFCSEG---QVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           TF ++I                G C      + +  ++   KMVE    P+  +   L+ 
Sbjct: 709 TFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLML 768

Query: 369 GLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           G+C  G L  A K F     K G +   + +N L+S  CK  +  +A  ++ +M
Sbjct: 769 GICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDM 822



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 259/545 (47%), Gaps = 44/545 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C P   TY  ++ AL    + +E  +L+ +M+++G+ PN  TY +L+   C    
Sbjct: 314 MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCK 373

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A  ++  M +   +P+V TYN LING+C  GM+E+A  + + MES  L P+  TYN 
Sbjct: 374 LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + +     +A  +++++ E  + P+ VT+N +I   C+ G  D A +++  M + G
Sbjct: 434 LIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY ++ID+ CK+  +EEA  + D + +K +  N +    ++   C   K++EA+
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++L     +    + +++  LI G   D K   A  L ++M +  + P+  T   +I  L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  + A     ++L SG  PD  T+ T I  +C EG+++ A     KM E    PD+
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                                               TY++LI       R   AF +L  
Sbjct: 673 -----------------------------------FTYSSLIKGYGDLGRTNSAFVVLKR 697

Query: 421 MEEKKLGPDRYTYAAIHTALVE--SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE- 477
           M +    P ++T+ ++   L+E   G+++  +    +M  +  +   +V     K  E  
Sbjct: 698 MHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVM--SNMMEFDIVVELLEKMVEHG 755

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQK-GIAINKSTYMNLMNGLIKRRK--SI 534
           + P++ SY + +   C  G  + A ++F+  +QK GI+ ++  +  L++   K  K    
Sbjct: 756 VTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEA 815

Query: 535 SKAVD 539
           +K VD
Sbjct: 816 AKVVD 820



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 19/421 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PD  TY +++D+L K  ++ E  DL   ++++ ++PN   Y  L+ GYCK G 
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +++ M     LP+  T+N LI+G C  G L+EA  L ++M  + L P V T   
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+R  + G    A++   ++   G KP+A T+   I+ YC+EG++  A  +V  M+ENG
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT-LNTILHTL--------- 230
            SPD  TY++LI      G    AF ++  M   G + +  T L+ I H L         
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727

Query: 231 -----CCEKKL---DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
                C    +   D    LL    + G   +  SY  L+ G         A K++D M+
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ 787

Query: 283 ERQ-IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           +++ I PS   +NA++    +  K  +A  ++++++  G +P   +   +I     +G+ 
Sbjct: 788 QKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEK 847

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E+       +++  +  D +   I++ G+ ++G++E   + F      G    S TY+ L
Sbjct: 848 ERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLL 907

Query: 402 I 402
           I
Sbjct: 908 I 908



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/480 (22%), Positives = 201/480 (41%), Gaps = 67/480 (13%)

Query: 62  KEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           K A+     ++QN      V++Y  L+    N G +   F++R  M +S   + D +   
Sbjct: 104 KTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVL 163

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            L  +  +       +KLI              +N ++    + G +D+  ++   M E+
Sbjct: 164 DLCRKMNKDESFELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVYMEMLED 212

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+  TYN +++  CK GN+EEA + + ++   GL  +  T                 
Sbjct: 213 KVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFT----------------- 255

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                             Y +LI GY + +  + A K++ EM  +    +   Y  +I G
Sbjct: 256 ------------------YTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHG 297

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L    + ++A+D+  ++      P   T+  +I   C   +  +AL    +M EK  KP+
Sbjct: 298 LCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPN 357

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I T  +L+  LC +  LEKA +     + KG   + +TYN LI+  CK   +EDA  ++ 
Sbjct: 358 IHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVE 417

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            ME + L P+  TY  +     +   + +A    + M+E                  ++ 
Sbjct: 418 LMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLE-----------------RKVL 459

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           P  ++Y+  I+  C  G +  A ++      +G+  +  TY ++++ L K ++ + +A D
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR-VEEACD 518


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/581 (28%), Positives = 280/581 (48%), Gaps = 71/581 (12%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +N ++  + +  + + V  L   M+++ +  +  ++NIL+  +C    L  A+ 
Sbjct: 74  LPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALS 133

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T++ L++G C    + EA  L  +M      P+VVT+ TL+N   
Sbjct: 134 TFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLC 189

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++PN +T+  ++   CK G    A  ++R MEE +   P+ 
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID   K G   +A  +   M  KG+  +  T N ++   C   +  EA  LL  
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    + V+Y  LI  Y ++ K   A +L+DEM  R I+P+T TYN+MI G  +  +
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369

Query: 306 TEQA-----------------------------------IDMLNELLQSGMIPDETTFNT 330
            + A                                    ++L+E+ ++G++ D TT+NT
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGFC  G +  AL    +M+     PDIVTCN LL GLC  G L+ AL+ F+      
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D  TYN LIS L  E +  +A  L  EM  + + P+  TY+++   
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549

Query: 440 LVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           L +  RL+EA Q F S+                    +   P  ++++  ++ +C  GR 
Sbjct: 550 LCKQSRLDEATQMFDSM------------------GSKSFSPDVVTFNTLVSGYCKAGRV 591

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            D L++F E  ++GI  +  TY+ L++G  ++  +I+ A+D
Sbjct: 592 DDGLELFCEMGRRGIVADAITYITLIHGF-RKVGNINGALD 631



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 249/478 (52%), Gaps = 18/478 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T+++ L ++G++ E   LL  M + GL PN+ TY  +V G CK+G    A+
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 66  RVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++  M +   + P+V  Y+ +I+G    G   +A  L  EM+   + PD+ TYN +I+ 
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SGR  EA +L+ E+ E  I PN VT++ +I  Y KE K  +A ++   M   G  P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN++ID  CK   ++ A  M  VM  KG   +  T NT++   C  K++D+   LL+
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   D  +Y TLI G+      N AL L  +M    + P   T N ++ GL  +G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 305 KTEQAIDMLNELLQS-----------GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           K + A++M   + +S           G+ PD  T+N +I G  +EG+  +A + + +M  
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +   P+ +T + +++GLC++  L++A + F S   K  + D VT+NTL+S  CK  R++D
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
              L  EM  + +  D  TY  +     + G +  A      M+ +G      V P+T
Sbjct: 594 GLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG------VYPDT 645



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 273/536 (50%), Gaps = 33/536 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT++T+L  L  + +++E  DL   M +    PN  T+  L++G C+ G + E
Sbjct: 141 LGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVE 196

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLI 122
           A+ ++D M ++   P+  TY  +++G C  G    A  L ++ME +  + P+VV Y+ +I
Sbjct: 197 AVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAII 256

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +  ++ GR  +A  L  E+ E GI P+  T+N MI  +C  G+  +A ++++ M E   +
Sbjct: 257 DGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN 316

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ VTY+ LI+A  K     EA  + D M  +G+  NTIT N+++   C + +LD A  +
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   D  ++ TLI GY   ++ +   +L  EM E  ++  T TYN +I G   
Sbjct: 377 FYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCL 436

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--------VEK 354
            G    A+D+  +++ SG+ PD  T NT++ G C  G+++ AL+    M          +
Sbjct: 437 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR 496

Query: 355 SF---KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            F   +PD+ T NIL+SGL  EG   +A + ++    +G   +++TY+++I+ LCK+ RL
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           ++A  +   M  K   PD  T+  + +   ++GR+++  +    M   G           
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRG----------- 605

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                 I   +I+Y   I+     G    AL IF+E    G+  +  T  +++  L
Sbjct: 606 ------IVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 218/426 (51%), Gaps = 11/426 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y+ I+D L+K G+ ++  +L ++M+++G+ P+  TYN ++ G+C  G   EA R+
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL 306

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K  P+V TY+ LIN +       EA  L  EM    ++P+ +TYN++I+ F +
Sbjct: 307 LQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCK 366

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             R   A  +   +   G  P+  T N +I  YC   +ID   +++  M E G   D  T
Sbjct: 367 QNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTT 426

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI   C  G++  A  +   M   G+  + +T NT+L  LC   KL +A  +  +  
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486

Query: 248 K-----------RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           K            G   D  +Y  LI+G   + K   A +L+ EM  R I+P+T TY++M
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSM 546

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I GL +  + ++A  M + +      PD  TFNT++ G+C  G+V+  L+   +M  +  
Sbjct: 547 INGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGI 606

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
             D +T   L+ G  + G +  AL  F+  I  G   D++T  ++++ L  +  L+ A  
Sbjct: 607 VADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVA 666

Query: 417 LLSEME 422
           +L +++
Sbjct: 667 MLEDLQ 672



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 176/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TYN+++D   K+ +L+    +   M  +G  P+  T+N L+ GYC    + + 
Sbjct: 349 GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDG 408

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  MT+   + D  TYN LI+G+C  G L  A  L ++M S  + PD+VT NTL++ 
Sbjct: 409 TELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 468

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK +     +LD     +G++P+  T+NI+I     EGK  +A ++ 
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELY 528

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           + M   G  P+ +TY+++I+  CK   ++EA +M D MG K    + +T NT++   C  
Sbjct: 529 KEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   D ++Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 589 GRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITI 648

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
            +M+  L    + ++A+ ML +L  S
Sbjct: 649 RSMLTVLWSKEELKRAVAMLEDLQMS 674



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 25/322 (7%)

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
           G  G +  ++ L +  H +   K L++A  L +   +       + +  L+    R E+ 
Sbjct: 37  GEAGFRGESLKLRSGFHEI---KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERP 93

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +  + L+ +M+ +QI    +++N +I       K   A+    ++ + G  PD  TF+T+
Sbjct: 94  DLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTL 153

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +HG C E +V +AL   ++M     +P++VT   L++GLCREG + +A+      +  G 
Sbjct: 154 LHGLCVEDRVSEALDLFHQMC----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQ 450
             + +TY T++  +CK      A  LL +MEE   + P+   Y+AI   L + GR  +A 
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAH 269

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
              + M E G                 I P   +Y+  I+  CS GR+ +A ++ +E  +
Sbjct: 270 NLYTEMQEKG-----------------IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLE 312

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
           + I  N  TY  L+N  +K RK
Sbjct: 313 RKINPNVVTYSALINAYVKERK 334


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 254/515 (49%), Gaps = 18/515 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V ++ +L A+ K  K + V  L   M+  G+  N  TY+I ++ +C+   L  A+ 
Sbjct: 72  FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T N L+NG+C+   + EA  L  +M  +   PD VT+ TL++  F
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +  ++ EA  L++ +   G +P+ VT+  +I   CK G+ D A  ++  ME+     D V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNT+ID  CK  +M++AF + + M  KG+K +  T N ++  LC   +  +A  LL+  
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGK 305
            ++    D V +  LI  + ++ K   A KL+DEM K +   P    YN +I G  +  +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+ +++  E+ Q G++ +  T+ T+IHGF      + A     +MV     PDI+T NI
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL GLC  G +E AL  F     +   +D VTY T+I +LCK  ++ED + L   +  K 
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P+  TY  + +     G  EEA      M E G +                 P+S +Y
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-----------------PNSGTY 534

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           +  I      G    + ++ +E R  G A + ST+
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 227/448 (50%), Gaps = 4/448 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G+G  P  VT N++L+      +++E   L+  M + G  P+  T+  LV G  +     
Sbjct: 140 GYG--PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA+ +V+ M      PD+ TY  +ING C  G  + A  L  +ME  K+  DVV YNT+I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   +     +AF L ++++  GIKP+  T+N +I   C  G+   A +++ +M E   +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYM 241
           PD V +N LIDA  K G + EA ++ D M + K    + +  NT++   C  K+++E   
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +    S+RG   + V+Y TLI G+F+    + A  ++ +M    + P   TYN ++ GL 
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            +G  E A+ +   + +  M  D  T+ T+I   C  G+VE        +  K  KP++V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T   ++SG CR+G+ E+A   F      G   +S TYNTLI +  ++     +  L+ EM
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEA 449
                  D  T+  + T ++  GRL+++
Sbjct: 558 RSCGFAGDASTFGLV-TNMLHDGRLDKS 584



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 221/445 (49%), Gaps = 1/445 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   +  TY+  ++   ++ +L+    +L  M K G  P+  T N L++G+C    
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +VD M +    PD  T+  L++G        EA  L + M      PD+VTY  
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + G    A  L++++++  I+ + V +N +I   CK   +D A  +   ME  G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN LI   C  G   +A R++  M  K +  + +  N ++     E KL EA 
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340

Query: 241 MLLNSASKRGY-YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            L +   K  + + D V+Y TLI G+ + ++    ++++ EM +R ++ +T TY  +I G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             Q+   + A  +  +++  G+ PD  T+N ++ G C+ G VE AL     M ++  K D
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           IVT   ++  LC+ G +E     F S  LKG   + VTY T++S  C++   E+A  L  
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520

Query: 420 EMEEKKLGPDRYTYAAIHTALVESG 444
           EM+E    P+  TY  +  A +  G
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDG 545



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 212/412 (51%), Gaps = 2/412 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT+ T++  LF+  K +E   L+  M  +G  P+  TY  +++G CK G    A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +++ M + K   DV  YN +I+G C    +++AF L  +ME+  + PDV TYN LI+ 
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-P 183
               GR  +A +L+ ++ E  I P+ V  N +I  + KEGK+ +A K+   M ++    P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V YNTLI   CK   +EE   +   M ++GL  NT+T  T++H     +  D A M+ 
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G + D ++Y  L+ G   +     AL +++ M++R +     TY  MI  L ++
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK E   D+   L   G+ P+  T+ T++ GFC +G  E+A     +M E    P+  T 
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           N L+    R+G    + +  +     G A D+ T+  L++++  + RL+ +F
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSF 585



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 239/506 (47%), Gaps = 18/506 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           KL++   L  DM K    P+   ++ L+S   K+      + + + M       +++TY+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           + IN +C    L  A  +  +M  L   P +VT N+L+N F    R  EA  L+D++ E 
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G +P+ VT   ++    +  K  +A  +V  M   G  PD VTY  +I+  CK G  + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +++ M +  ++ + +  NTI+  LC  K +D+A+ L N    +G   D  +Y  LI+ 
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIP 323
                + + A +L  +M E+ I P    +NA+I    + GK  +A  + +E+++S    P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D   +NT+I GFC   +VE+ ++   +M ++    + VT   L+ G  +    + A   F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +  +  G   D +TYN L+  LC    +E A  +   M+++ +  D  TY  +  AL ++
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G++E+       +   G                 + P+ ++Y+  ++  C +G  ++A  
Sbjct: 475 GKVEDGWDLFCSLSLKG-----------------VKPNVVTYTTMMSGFCRKGLKEEADA 517

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           +F E ++ G   N  TY  L+   ++
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLR 543



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 229/471 (48%), Gaps = 18/471 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  ++ L++        +    L ++M++L +  ++ TY+ 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            IN F    +   A  ++ ++ + G  P+ VT N ++  +C   +I +A  +V  M E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD VT+ TL+    +     EA  +++ M  KG + + +T   +++ LC   + D A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   K     D V Y T+I G  + +  + A  L+++M+ + I P  FTYN +I  L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPD 359
              G+   A  +L+++L+  + PD   FN +I  F  EG++ +A + +++MV+ K   PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +V  N L+ G C+   +E+ ++ FR    +G   ++VTY TLI    + R  ++A  +  
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M    + PD  TY  +   L  +G +E A                VV     K   ++D
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETA---------------LVVFEYMQKRDMKLD 460

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              ++Y+  I   C  G+ +D   +F     KG+  N  TY  +M+G  ++
Sbjct: 461 --IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 213/439 (48%), Gaps = 20/439 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A  L  +M   +  P +V ++ L++   +  +      L +++   GI  N  T++I
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
            I ++C+  ++  A  I+  M + G+ P  VT N+L++  C    + EA  ++D M   G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + +T+T  T++H L    K  EA  L+     +G   D V+YG +I G  +  + + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L ++M++ +I      YN +I GL +    + A D+ N++   G+ PD  T+N +I   
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-- 393
           C+ G+   A +  + M+EK+  PD+V  N L+    +EG L +A K +   + K K    
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV-KSKHCFP 354

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V YNTLI   CK +R+E+   +  EM ++ L  +  TY  +     ++   + AQ   
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             MV  G                 + P  ++Y+  ++  C+ G  + AL +FE  +++ +
Sbjct: 415 KQMVSDG-----------------VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457

Query: 514 AINKSTYMNLMNGLIKRRK 532
            ++  TY  ++  L K  K
Sbjct: 458 KLDIVTYTTMIEALCKAGK 476



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 174/367 (47%), Gaps = 16/367 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D A  +  +M ++   P  V ++ L+ A  K    +    + + M   G+  N  T +
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
             ++  C   +L  A  +L    K GY    V+  +L+ G+    + + A+ L D+M E 
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P T T+  ++ GL Q  K  +A+ ++  ++  G  PD  T+  +I+G C  G+ + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L   NKM +   + D+V  N ++ GLC+   ++ A   F     KG   D  TYN LIS 
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M EK + PD   + A+  A V+ G+L EA+K    MV++     
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS----- 349

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                      +   P  ++Y+  I   C   R ++ +++F E  Q+G+  N  TY  L+
Sbjct: 350 -----------KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398

Query: 525 NGLIKRR 531
           +G  + R
Sbjct: 399 HGFFQAR 405



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 169/346 (48%), Gaps = 37/346 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  TYN ++  L   G+ ++   LLSDM ++ + P+   +N L+  + K G 
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335

Query: 61  LKEAMRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L EA ++ D M ++K   PDV  YN LI G+C    +EE   + +EM    L+ + VTY 
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+ FF++     A  +  ++   G+ P+ +T+NI++   C  G ++ A  +   M++ 
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
               D VTY T+I+A CKAG +E+ + +   +  KG+K N +T                 
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT----------------- 498

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                             Y T+++G+ R      A  L+ EMKE   +P++ TYN +I  
Sbjct: 499 ------------------YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             + G    + +++ E+   G   D +TF  ++     +G+++K+ 
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSF 585



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 126/236 (53%), Gaps = 1/236 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD V YNT++    K  ++ E  ++  +M ++GLV N  TY  L+ G+ +      A 
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M  +   PD+ TYN+L++G CN G +E A  + + M+   +  D+VTY T+I   
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++G+  + + L   L   G+KPN VT+  M+  +C++G  ++A  +   M+E+G  P+ 
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            TYNTLI A  + G+   +  ++  M   G   +  T   + + L  + +LD++++
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKSFL 586



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 20/288 (6%)

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +D K + A+ L+ +M + +  PS   ++ ++  +++  K +  I +  ++   G+  + 
Sbjct: 51  LQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 110

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T++  I+ FC   Q+  AL    KM++  + P IVT N LL+G C    + +A+     
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +  G   D+VT+ TL+  L +  +  +A  L+  M  K   PD  TY A+   L + G 
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYS 486
            + A    + M E GKI   VV  NT                       + I P   +Y+
Sbjct: 231 PDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             I+  C+ GR+ DA ++  +  +K I  +   +  L++  +K  K +
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 266/555 (47%), Gaps = 52/555 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P   + N +L  L K G+ +  R    DM   G+  +  TYNI++   CK G 
Sbjct: 211 MRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGD 270

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +   M +    PD+ TYN LI+G    G+L+E   + ++M+     PDV+TYN 
Sbjct: 271 LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 330

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  R  +AF+ + E+  +G+KPN VT++  I  +CKEG + +A K   +M    
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  TY +LIDANCKAGN+ EA ++++ + + G+K+N +T   +L  LC E ++ EA 
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 450

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  +    G   ++ +Y  L+ G+ + ++   A  +  EMKE+ I P    Y  ++WGL
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 510

Query: 301 S-----------------------------------QSGKTEQAIDMLNELLQSGMIPDE 325
                                               +SG+  +A+ +L E+L  G+I  E
Sbjct: 511 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE 570

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+  +I G C  G V++A+    +M E   +P++     L+ GLC+    E A K F  
Sbjct: 571 VTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE 630

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + KG   D + Y  LI    K   L++A  L   M E  +  D + Y A+   L  SG+
Sbjct: 631 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ 690

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +++A+     M+  G +                 P  + Y   I ++ + G+  +AL++ 
Sbjct: 691 VQKARNLLDEMIGKGVL-----------------PDEVVYMCLIKKYYALGKVDEALELQ 733

Query: 506 EETRQKGIAINKSTY 520
            E  ++G+    S +
Sbjct: 734 NEMAKRGMITGLSDH 748



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 231/501 (46%), Gaps = 54/501 (10%)

Query: 67  VVDLM--TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           V DL+  T+N  +P    ++ L +     GMLEEA     +M   ++ P   + N L++R
Sbjct: 170 VFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHR 229

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR   + K   ++   GIK +  T+NIMI + CKEG ++ A  +   M+E GF+PD
Sbjct: 230 LSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPD 289

Query: 185 CVTYNTLIDAN-----------------------------------CKAGNMEEAFRMMD 209
            VTYN+LID +                                   CK   M +AF  + 
Sbjct: 290 IVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLH 349

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   GLK N +T +T +   C E  L EA        +     +E +Y +LI    +  
Sbjct: 350 EMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAG 409

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               ALKL +E+ +  I  +  TY A++ GL + G+ ++A ++   +L +G+ P++ T+ 
Sbjct: 410 NLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYT 469

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            ++HGF    ++E A     +M EK  KPD++    +L GLC E  LE+A          
Sbjct: 470 ALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 529

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   ++V Y TL+ +  K  +  +A  LL EM +  L     TY A+   L +SG ++EA
Sbjct: 530 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEA 589

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 M E G      +QPN +            Y+  ++  C    ++ A ++F+E  
Sbjct: 590 MHHFGRMSEIG------LQPNVA-----------VYTALVDGLCKNNCFEVAKKLFDEML 632

Query: 510 QKGIAINKSTYMNLMNGLIKR 530
            KG+  +K  Y  L++G +K 
Sbjct: 633 DKGMMPDKIAYTALIDGNMKH 653



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 17/263 (6%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           + + + K + +M    I  S FTYN MI  L + G  E A  +  ++ ++G  PD  T+N
Sbjct: 235 RGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYN 294

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++I G    G +++ +    +M +    PD++T N L++  C+   + KA +F       
Sbjct: 295 SLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + VTY+T I + CKE  L++A     +M    L P+ +TY ++  A  ++G L EA
Sbjct: 355 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 414

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            K    +++ G                 I  + ++Y+  ++  C +GR K+A ++F    
Sbjct: 415 LKLVEEILQAG-----------------IKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 457

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
             G+A N+ TY  L++G IK ++
Sbjct: 458 NAGVAPNQETYTALVHGFIKAKE 480



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 77/155 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+   Y  ++D L K       + L  +M  +G++P++  Y  L+ G  K G 
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA+ + D M +     D+  Y  LI G  ++G +++A  L  EM    +LPD V Y  
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           LI +++  G+  EA +L +E+ + G+      H +
Sbjct: 716 LIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 750


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 254/455 (55%), Gaps = 9/455 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++ AL  + +L+E R  L +M  + L PN  TY +L+ G CK G + EA+ +
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K +P   TYN LI+G C A    EA+ L +EM     +PD+ TY TLI  F +
Sbjct: 104 LSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-PDCV 186
           S +S +A ++ ++L   G +P+ VT++ +I   CKEG++ +A  +   M ++G   P+ V
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+LI   C+ G M+EA  +++ M   G   + +T  T+++  C   +LD+AY LLN  
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           +++G   D V++ +L+ G  R+ + + A+ +  EM+ +   P+ +TYN ++ G  ++ + 
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A   + E +     P+  +FN +I G C   +  +A++   +   +   PD+V    +
Sbjct: 343 EEARKFMLEEMDCP--PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400

Query: 367 LSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           + GLCRE  +++A + +R  + + G   +S+TY+TLI+ LC    L+ A G +    EK 
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKG 456

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             P+  TY  +  A  ++ R E+A++    MV+ G
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/422 (33%), Positives = 241/422 (57%), Gaps = 9/422 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY  ++D L K G+++E   LLS M+K+  VP   TYN L+SG CK     EA  +
Sbjct: 79  PNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDL 137

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M  +  +PD++TY  LI G+C +   ++A R+ +++ +    PDVVTY+ LI+   +
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197

Query: 128 SGRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            GR  EA  L   + + G   PN VT+N +I  +C+ GK+D+A  ++  M E G SPD V
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY TL++  CK   +++A+ +++ M RKGL  + +T  +++  LC E +L +A  +L   
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++       +Y T++ GY R  +   A K    ++E    P+  ++N MI GL +  ++
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRS 375

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNI 365
            +A++++ E  +    PD   + T+I G C E +V++A + + KM+E+    P+ +T + 
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++GLC  G+L++A    R +I KG   +  TYN LI +  K  R EDA  LL +M ++ 
Sbjct: 436 LITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491

Query: 426 LG 427
            G
Sbjct: 492 FG 493



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 262/511 (51%), Gaps = 26/511 (5%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D VTY +++  L K  +L +    L  M  +G  P+  TY  ++   C    L EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           + ++ M      P+V TY +LI+G C  G ++EA  L  +M   K +P  VTYN+LI+  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++ R+ EA+ L++E+   G  P+  T+  +I  +CK  K D A ++   +   GF PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEAYMLLN 244
           VTY+ LID  CK G ++EA  +   M + G  M NT+T N+++   C   K+DEA  LL 
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   D V+Y TL+ G+ +  + + A  L ++M  + + P   T+ +++ GL +  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A+ +L E+ +    P   T+NTI+ G+C   Q+E+A +F   + E    P++V+ N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFN 363

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM-EE 423
           I++ GLC+     +A++       +    D V Y T+I  LC+E+++++A  +  +M EE
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P+  TY+ + T L  +G L+ A+ +    +E G +                 P+  
Sbjct: 424 PGCLPNSITYSTLITGLCNAGMLDRARGY----IEKGCV-----------------PNIG 462

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           +Y+  I+      R +DA ++ ++  Q+G  
Sbjct: 463 TYNLLIDAFRKANRDEDARELLDDMVQRGFG 493



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 217/422 (51%), Gaps = 25/422 (5%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D VTY +LI    +  R  +A   + ++   G  P+  T+  +I   C E ++ +A K +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M     +P+ VTY  LID  CK G ++EA  ++  M RK      +T N+++  LC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           ++  EAY LL      G   D  +Y TLITG+ + +K++ AL++++++  R   P   TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           + +I GL + G+ ++AID+   +++SG  +P+  T+N++I GFC  G++++A+    +M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           E    PD+VT   L++G C+   L+ A         KG   D VT+ +L+  LC+E RL 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           DA  +L EM  K   P  YTY  I      + +LEEA+KF                    
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML------------------ 350

Query: 473 KTPEEID--PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              EE+D  P+ +S++  I   C   R  +A+++ EE R++    +   Y  +++GL + 
Sbjct: 351 ---EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407

Query: 531 RK 532
           +K
Sbjct: 408 KK 409



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 222/460 (48%), Gaps = 22/460 (4%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           ++  N    D  TY  LI G C    LE+A     +M S    PDV TY  +I+      
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R  EA K ++E+    + PN VT+ ++I   CK G++D+A  ++  M +    P  VTYN
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +LI   CKA    EA+ +++ M   G   +  T  T++   C  KK D+A  +      R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           G+  D V+Y  LI G  ++ +   A+ L+  M K    MP+T TYN++I G  + GK ++
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++L  + ++G  PD  T+ T+++GFC   +++ A    N+M  K   PD+VT   L+ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLCRE  L  A+        K  +    TYNT++   C+  +LE+A   +  +EE    P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPP 357

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  ++  +   L +  R  EA +    +VE  +                 +P  + Y+  
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAME----LVEEAR-------------RRRCNPDVVMYTTV 400

Query: 489 INEHCSQGRYKDALQIFEET-RQKGIAINKSTYMNLMNGL 527
           I+  C + +  +A +++ +   + G   N  TY  L+ GL
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGL 440



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 190/354 (53%), Gaps = 8/354 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+PD  TY T++    K  K ++   +   +  +G  P+  TY+ L+ G CK G LKEA
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204

Query: 65  MRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           + +   M ++ S +P+  TYN LI+G+C  G ++EA  L + M      PDVVTY TL+N
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F +  R  +A+ L++++   G+ P+ VT   ++   C+E ++  A  I+  M     SP
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              TYNT++D  C+A  +EEA + M  +       N ++ N ++  LC   +  EA  L+
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV 382

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQ 302
             A +R    D V Y T+I G  R++K + A +++ +M +E   +P++ TY+ +I GL  
Sbjct: 383 EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +G  ++A       ++ G +P+  T+N +I  F    + E A +  + MV++ F
Sbjct: 443 AGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 18/179 (10%)

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           S   D VT   L+ GLC+   LE+AL F    + KG   D  TY  +I +LC E RL +A
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
              L EM  + L P+  TY  +   L + GR++EA    S      K+  + V       
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLS------KMRKKCV------- 112

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                P++++Y+  I+  C   R  +A  + EE    G   +  TY  L+ G  K +KS
Sbjct: 113 -----PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  GCLP+++TY+T++  L   G L+  R  +    ++G VPN  TYN+L+  + K   
Sbjct: 421 LEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANR 476

Query: 61  LKEAMRVVDLMTQ 73
            ++A  ++D M Q
Sbjct: 477 DEDARELLDDMVQ 489


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 233/417 (55%), Gaps = 3/417 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C PD + YN ++      G+L+  R L+++M  +   P+  TYN L+ G C  G    A
Sbjct: 121 ACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANA 177

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+D M + + +PDV TY +L+   C     ++A +L  EM      PD+VTYN ++N 
Sbjct: 178 LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 237

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A + +  L  +G +PN V++NI++K  C   + + A +++  M + G  P+
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N LI   C+ G +E A  +++ + + G   N+++ N +LH  C +KK+D+A   L+
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG Y D VSY TL+T   R  + + A++L  ++K++   P   +YN +I GL+++G
Sbjct: 358 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT++A+++LNE++  G+ PD  T++TI  G C E ++E A++   K+ +   +P+ V  N
Sbjct: 418 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 477

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            ++ GLC+      A+  F   I  G   +  TY  LI  L  E  +++A  LL E+
Sbjct: 478 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534



 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 236/460 (51%), Gaps = 8/460 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T   ++  L   G+  E R +L+        P+   YN +V+GYC  G L  A R+
Sbjct: 94  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRL 148

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  M      PD +TYN LI G C  G    A  +  EM   + +PDVVTY  L+    +
Sbjct: 149 VAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 205

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                +A KL+DE+ + G  P+ VT+N+++   C+EG++D A + ++N+   G  P+ V+
Sbjct: 206 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 265

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN ++   C A   E+A  +M  MG+KG   N +T N ++  LC +  ++ A  +L    
Sbjct: 266 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 325

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + +SY  L+  + + +K ++A+   D M  R   P   +YN ++  L +SG+ +
Sbjct: 326 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 385

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++L++L   G  P   ++NT+I G    G+ ++AL+  N+MV K  +PDI+T + + 
Sbjct: 386 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 445

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GLCRE  +E A++ F      G   ++V YN +I  LCK R    A  L + M      
Sbjct: 446 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 505

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           P+  TY  +   L   G ++EA+     +   G +   ++
Sbjct: 506 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 545



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 235/469 (50%), Gaps = 29/469 (6%)

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L EA+R+V     +   PD  T   LI     +G   EA R+          PDV+ Y
Sbjct: 79  GELDEALRLVG----SARRPDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAY 129

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N ++  +  +G+   A +L+ E+    ++P+A T+N +I+  C  G+   A  ++  M  
Sbjct: 130 NAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 186

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD VTY  L++A CK    ++A +++D M  KG   + +T N +++ +C E ++D+
Sbjct: 187 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   L +    G   + VSY  ++ G    E+   A +L  EM ++   P+  T+N +I 
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G  E A+++L ++ + G  P+  ++N ++H FC + +++KA+ F + MV +   P
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 366

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DIV+ N LL+ LCR G ++ A++       KG A   ++YNT+I  L K  + ++A  LL
Sbjct: 367 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 426

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +EM  K L PD  TY+ I   L    R+E+A +        GK+    ++PNT       
Sbjct: 427 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR------AFGKVQDMGIRPNT------- 473

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
               + Y+  I   C +     A+ +F      G   N+STY  L+ GL
Sbjct: 474 ----VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 30/446 (6%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           G L+EA RL          PD  T   LI +   SGR+ EA +++         P+ + +
Sbjct: 79  GELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAY 129

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N M+  YC  G++D A ++V  M      PD  TYNTLI   C  G    A  ++D M R
Sbjct: 130 NAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 186

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +    + +T   +L   C      +A  LL+    +G   D V+Y  ++ G  ++ + + 
Sbjct: 187 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A++    +      P+T +YN ++ GL  + + E A +++ E+ Q G  P+  TFN +I 
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
             C +G VE AL+   ++ +    P+ ++ N LL   C++  ++KA+ F    + +G   
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 366

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V+YNTL+++LC+   ++ A  LL ++++K   P   +Y  +   L ++G+ +EA +  
Sbjct: 367 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 426

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + MV  G                 + P  I+YS      C + R +DA++ F + +  GI
Sbjct: 427 NEMVSKG-----------------LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 469

Query: 514 AINKSTYMNLMNGLIKRRKSISKAVD 539
             N   Y  ++ GL KRR++ S A+D
Sbjct: 470 RPNTVLYNAIILGLCKRRETHS-AID 494



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 178/322 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTYN +++ + ++G++++  + L ++   G  PN  +YNI++ G C    
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  ++  M Q    P+V T+NMLI+  C  G++E A  + +++      P+ ++YN 
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +  +A   +D +   G  P+ V++N ++   C+ G++D A +++  +++ G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  ++YNT+ID   KAG  +EA  +++ M  KGL+ + IT +TI   LC E ++++A 
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G   + V Y  +I G  +  + + A+ L+  M     MP+  TY  +I GL
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
           +  G  ++A D+L+EL   G++
Sbjct: 519 AYEGLIKEARDLLDELCSRGVV 540


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/462 (32%), Positives = 249/462 (53%), Gaps = 18/462 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T+++ L ++G++ E   LL  M + GL PN+ TY  +V G CK+G    A+
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 66  RVVDLMTQNKSL-PDVWTYNM-----LINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTY 118
            ++  M +   + P+V  + +     +ING+C++G   EA +L +EM E  K+ PDVVTY
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LIN F + G+  EA +L DE+   GI P+ +T++ MI  +CK+ ++D A  +   M  
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G SPD +T+NTLI   C+A  +++  +++  M   GL  NTIT  T++H  C    L+ 
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IM 287
           A  LL      G   + V+  TL+ G   + K   AL+++  M++ +           + 
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P   TYN +I GL   GK  +A ++  E+   G++PD  T+N++IHG C + ++++A Q 
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQM 534

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            + M  KSF P++VT   L++G C+ G ++  L+ F     +G   +++TY TLI    K
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRK 594

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
              +  A  +  EM    + PD  T   + T L     L+ A
Sbjct: 595 VGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRA 636



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 274/552 (49%), Gaps = 42/552 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +  ++  + + G+L+ V  L   M+ + +  N  ++ IL+  +C    L  A+ 
Sbjct: 75  LPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALS 134

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    P V T++ L++G C    + EA  L  +M      P+VVT+ TL+N   
Sbjct: 135 TFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLC 190

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E G++PN +T+  ++   CK G    A  ++R MEE +   P+ 
Sbjct: 191 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNV 250

Query: 186 VTY-----NTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           V +       +I+  C +G   EA +++ +++ RK +  + +T N +++    E K  EA
Sbjct: 251 VIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEA 310

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L +    RG     ++Y ++I G+ +  + + A  ++  M  +   P   T+N +I G
Sbjct: 311 EELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAG 370

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             ++ + +  I +L+E+ ++G++ +  T+ T+IHGFC  G +  A     +MV     P+
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430

Query: 360 IVTCNILLSGLCREGILEKALKFFR-----------SWILKGKAVDSVTYNTLISSLCKE 408
           +VTCN LL GLC  G L+ AL+ F+           S    G   D  TYN LIS L  E
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE 490

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVV 467
            +  +A  L  EM  + + PD  TY ++   L +  RL+EA Q F S+            
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM------------ 538

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   +   P+ ++++  IN +C  GR  D L++F E  ++GI  N  TY+ L++G 
Sbjct: 539 ------GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGF 592

Query: 528 IKRRKSISKAVD 539
            ++  +I+ A+D
Sbjct: 593 -RKVGNINGALD 603



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 248/486 (51%), Gaps = 28/486 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT++T+L  L  + +++E  DL   M K    PN  T+  L++G C+ G + E
Sbjct: 142 LGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVE 197

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTY---- 118
           A+ ++D M ++   P+  TY  +++G C  G    A  L ++ME +  + P+VV +    
Sbjct: 198 AVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLER 257

Query: 119 -NTLINRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
              +IN F  SGR  EA +L+ E L+   I P+ VT+N +I  + KEGK  +A ++   M
Sbjct: 258 RTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEM 317

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G  P  +TY+++ID  CK   ++ A  M  +M  KG   + IT NT++   C  K++
Sbjct: 318 LPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRV 377

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+   LL+  ++ G   + ++Y TLI G+ +    N A  L  EM    + P+  T N +
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTL 437

Query: 297 IWGLSQSGKTEQAIDMLNELLQS-----------GMIPDETTFNTIIHGFCSEGQVEKAL 345
           + GL  +GK + A++M   + +S           G+ PD  T+N +I G  +EG+  +A 
Sbjct: 438 LDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 497

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           + + +M  +   PD +T N ++ GLC++  L++A + F S   K  + + VT+ TLI+  
Sbjct: 498 ELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 557

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK  R++D   L  EM  + +  +  TY  +     + G +  A      M+ +G     
Sbjct: 558 CKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASG----- 612

Query: 466 VVQPNT 471
            V P+T
Sbjct: 613 -VYPDT 617



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 189/349 (54%), Gaps = 11/349 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN +++A  K+GK  E  +L  +M  +G++P+  TY+ ++ G+CK   L  A  +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM      PD+ T+N LI G+C A  +++  +L  EM    L+ + +TY TLI+ F +
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G    A  L+ E+   G+ PN VT N ++   C  GK+  A ++ + M++         
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468

Query: 179 --NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             NG  PD  TYN LI      G   EA  + + M  +G+  +TIT N+++H LC + +L
Sbjct: 469 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRL 528

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  + +S   + +  + V++ TLI GY +  + +  L+L+ EM  R I+ +  TY  +
Sbjct: 529 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 588

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I G  + G    A+D+  E++ SG+ PD  T   ++ G  S+ ++++A+
Sbjct: 589 IHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAV 637



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 244/508 (48%), Gaps = 40/508 (7%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
           L +  DL  DM +   +P+   +  L+    ++G L   + +   M   +   + +++ +
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+  +C+   L  A     ++  L   P VVT++TL++      R  EA  L  ++    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
            KPN VT   ++   C+EG++ +A  ++  M E+G  P+ +TY T++D  CK G+   A 
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++    RK  +++ I  N ++  L  E++                         +I G+
Sbjct: 235 NLL----RKMEEVSHIKPNVVIWPL--ERRT-----------------------CMINGF 265

Query: 266 FRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
               + + A +L  EM ER+ I P   TYNA+I    + GK  +A ++ +E+L  G+IP 
Sbjct: 266 CSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPS 325

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T++++I GFC + +++ A      M  K   PDI+T N L++G CR   ++  +K   
Sbjct: 326 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 385

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G   +++TY TLI   C+   L  A  LL EM    + P+  T   +   L ++G
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG 445

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L++A +    M +  K++     P        ++P   +Y+  I+   ++G++ +A ++
Sbjct: 446 KLKDALEMFKAM-QKSKMDIDASHPFNG-----VEPDVQTYNILISGLINEGKFLEAEEL 499

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +EE   +GI  +  TY ++++GL K+ +
Sbjct: 500 YEEMPHRGIVPDTITYNSVIHGLCKQSR 527



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 173/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  +TY++++D   K+ +L+    +   M  +G  P+  T+N L++GYC+   + + 
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++++  MT+   + +  TY  LI+G+C  G L  A  L +EM S  + P+VVT NTL++ 
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440

Query: 125 FFESGRSMEAFKLIDELDE-----------HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+  +A ++   + +           +G++P+  T+NI+I     EGK  +A ++ 
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TYN++I   CK   ++EA +M D MG K    N +T  T+++  C  
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   + ++Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ GL    + ++A+ ML +L  S
Sbjct: 621 RNMLTGLWSKEELKRAVAMLEDLQMS 646


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/544 (29%), Positives = 279/544 (51%), Gaps = 23/544 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T   ++D   K+GK+ E  +LL  M ++G + +  TY+ L+ G C    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPD 114
           + EA ++   M +    PD   Y  L+ G C  G +  A  L +EM        +K  P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           +V+Y+ +I+   +  R  EA +L  E+   G+ P+ +++  +I  +C+ GK +KA  +  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M + G   D  T + LID  CK G + EA  +++VM ++G  ++ +T +T++  LC + 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER------QIMP 288
           ++ EA  L  S  K G   D ++YGTL+ G  +    N AL+L  EM         +  P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  +Y+ +I GL +  + ++A ++  E+   G++PD  ++ T+IHGFC  G+ EKA    
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N+M++   +PD+ T ++L+  LC++G + +A K     I +G   D VT  TL+  LC +
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            R+  A  L  +M++    P+  T A +   L +SG ++ A +            H+ + 
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL-----------HKNML 469

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
            +TS       P++ISYS  I+  C  GR  +A ++F+E +  G+  +  +Y +L++G  
Sbjct: 470 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 529

Query: 529 KRRK 532
           +  K
Sbjct: 530 RSGK 533



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 274/544 (50%), Gaps = 23/544 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D  T + ++D L K+GK+ E  +LL  M ++G + +  TY+ L+ G C    
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPD 114
           + EA R+   M +    PD   Y  L+ G C  G +  A +L +EM        +K  P 
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           +++Y+ +I+   +  R  EA +L  E+   GI P+ +++  +I  +C  GK +KA  +  
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M + G  PD  T + LID  CK G + EA ++++V+ ++G   + +T  T++  LC + 
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER------QIMP 288
           ++ +A  L     K G   + V+  TL+ G  +      AL+L   M            P
Sbjct: 422 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  +Y+ +I GL + G+ ++A ++  E+   G+IPD  ++ ++IHGFC  G+ + A    
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 541

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N+MV+   +PD+ T ++L+  LC+EG + +A +     I +G   ++VTY TL+  LC  
Sbjct: 542 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 601

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            R+ +A  L  +M++    PD  TY  +   L ++G ++ A +            H+ + 
Sbjct: 602 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL-----------HKKML 650

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
            +T +      P  ISYS  I+  C  GR  +A ++F+E +  G+  N  +Y +L++G  
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 710

Query: 529 KRRK 532
           +  K
Sbjct: 711 RSGK 714



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 283/545 (51%), Gaps = 35/545 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEV----RDLLSDMKKQGL--VPNRTTYNILVSG 54
           M+  GC PD + Y T++  L + GK+N      +++L+D  + G+   P   +Y+I++ G
Sbjct: 71  MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDG 130

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            CK     EA  +   M     +PDV +Y  LI+G+C +G  E+A  L  EM  + +  D
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V T + LI+   + G+ +EA +L++ + + G   + VT++ +IK  C + +I +A ++  
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM 250

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFR----MMDVMGRKGLKM--NTITLNTILH 228
           +M++ G  PD + Y TL+   C+ GN+  A +    M++  GR G+K     I+ + I+ 
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID 310

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC +++ DEA  L      +G   D +SY TLI G+    K  +A  L++EM +  I P
Sbjct: 311 GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 370

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
              T + +I  L + GK  +A  +L  ++Q G IPD  T  T++ G C + ++ KA Q  
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF 430

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV------DSVTYNTLI 402
            KM +    P++VTC  L+ GLC+ G ++ AL+  ++ +            ++++Y+ +I
Sbjct: 431 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 490

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             LCK  R ++A  L  EM+   + PD  +Y ++      SG+ ++A+   + MV+ G  
Sbjct: 491 DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG-- 548

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
               VQP+ +           ++S  I+  C +G+  +A ++ E   Q+G   N  TY  
Sbjct: 549 ----VQPDVT-----------TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 593

Query: 523 LMNGL 527
           L+ GL
Sbjct: 594 LVKGL 598



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 264/520 (50%), Gaps = 35/520 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEV----RDLLSDMKKQGLV--PNRTTYNILVSG 54
           M+  GC PD + Y T++  L + G +N      +++L+D  + G+   P   +Y+I++ G
Sbjct: 252 MQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 311

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            CK     EA  +   M     +PDV +Y  LI+G+C +G  E+A  L  EM  + + PD
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V T + LI+   + G+ +EA KL++ + + G  P+ VT   ++K  C + +I KA ++  
Sbjct: 372 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFL 431

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFR----MMDVMGRKGL--KMNTITLNTILH 228
            M++ G  P+ VT  TL+   C++GN++ A      M+      G+  K N I+ + I+ 
Sbjct: 432 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 491

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   + DEA  L       G   D +SY +LI G+ R  K   A  L++EM +  + P
Sbjct: 492 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 551

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
              T++ +I  L + GK  +A ++L  ++Q G IP+  T+ T++ G C   ++ +A Q  
Sbjct: 552 DVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLF 611

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV------DSVTYNTLI 402
            KM +    PD+VT   L+ GLC+ G ++ AL+  +  +            D ++Y+ +I
Sbjct: 612 MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 671

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             LCK  R ++A  L  EM+   + P+  +Y ++      SG+LE+A+   + MV+ G  
Sbjct: 672 DGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG-- 729

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
               VQ N           +++YS  I+  C +G+   AL
Sbjct: 730 ----VQLN-----------AVTYSVMIHGFCKEGQIDKAL 754



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 239/434 (55%), Gaps = 14/434 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD ++Y T++      GK  + + L ++M   G+ P+ TT ++L+   CK G 
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++++++ Q   +PDV T   L+ G C    + +A +L  +M+ L  +P+VVT  T
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447

Query: 121 LINRFFESGRSMEAFKL----IDELDEHGI--KPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           L+    +SG    A +L    + +   +GI  KPNA++++I+I   CK G+ D+A ++ +
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M+  G  PD ++Y +LI   C++G  ++A  + + M   G++ +  T + ++  LC E 
Sbjct: 508 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 567

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K+ EA  LL    +RG   + V+Y TL+ G   +++ + A +L+ +M++   +P   TY 
Sbjct: 568 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYG 627

Query: 295 AMIWGLSQSGKTEQAID----MLNELLQSG--MIPDETTFNTIIHGFCSEGQVEKALQFH 348
            ++ GL Q+G  + A++    ML++  Q G    PD  +++ II G C  G+ ++A +  
Sbjct: 628 TLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF 687

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            +M      P++++   L+ G CR G LE A   F   + +G  +++VTY+ +I   CKE
Sbjct: 688 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKE 747

Query: 409 RRLEDAFGLLSEME 422
            +++ A  L  +ME
Sbjct: 748 GQIDKA--LFQKME 759



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 23/225 (10%)

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +L  G+ PD TT   +I  FC EG+V +A +    MV++    DIVT + L+ GLC +  
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK------KLGPD 429
           + +A + F S    G   D++ Y TL+  LC+  ++  A  L  EM         K  P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             +Y+ I   L +  R +EA++    M   G +                 P  ISY+  I
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMM-----------------PDVISYTSLI 163

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           +  C  G+++ A  +F E    GI  + +T   L++ L K  K I
Sbjct: 164 HGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVI 208


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 150/450 (33%), Positives = 242/450 (53%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V Y+ ++ A  +  + ++  +    MK +G++P+    N ++S + K    ++A  +   
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M + +    V T+N++IN  C  G L++A      ME+L + P+VVTYNT+I+ +   GR
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  + D +   G+KP++ T+   I   CKEGK+++A  ++  M+E G  P  VTYNT
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  C  GN+E AF   D M R+GL     T N ++H L  + K+DEA  ++   S++G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y  LI GY R     +A  L DEM  + I P+  TY ++I+ LS+ G+ +QA 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           D+  ++++ G+ PD   FN +I G C+ G +++A     +M +    PD VT N L+ G 
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CREG +E A +       +G   D ++YNTLIS   K   ++DAF +  EM      P  
Sbjct: 482 CREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTL 541

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            TY A+   L ++   + A++    M+  G
Sbjct: 542 LTYNALIQGLCKNEEGDHAEQLLKEMISKG 571



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 220/395 (55%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VT+N +++ L K+GKL + ++ +  M+  G+ PN  TYN ++ GYC  G ++ A  + DL
Sbjct: 192 VTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL 251

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      PD +TY   I+G C  G LEEA  + ++M+ + L P  VTYNTLI+ +   G 
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              AF   D++   G+ P   T+N++I     + K+D+A  I++ M E G  PD VTYN 
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  C+ GN+++AF + D M  KG++   +T  ++++ L    ++ +A  L     ++G
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            + D + +  LI G+  +   +RA  +  EM + +++P   T+N ++ G  + GK E A 
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           +++ E+   G+ PD  ++NT+I G+   G ++ A +  ++M+   F P ++T N L+ GL
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           C+    + A +  +  I KG   +  TY +LI  +
Sbjct: 552 CKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 224/447 (50%), Gaps = 17/447 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y++LI   C     ++AF     M+   ++P V   N +++ F +S R+ +A+ L  E+ 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
              IK + VT NIMI   CKEGK+ KA + +  ME  G  P+ VTYNT+I   C  G +E
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  + D+M  +G+K ++ T  + +  +C E KL+EA  +L    + G     V+Y TLI
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            GY        A    D+M    +MP+  TYN +I  L    K ++A  ++ E+ + G++
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+N +I+G+C  G V+KA   H++M+ K  +P  VT   L+  L + G +++A   
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   + KG   D + +N LI   C    ++ AF +L EM++ K+ PD  T+  +      
Sbjct: 424 FEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCR 483

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++E A++    M   G                 I P  ISY+  I+ +  +G  KDA 
Sbjct: 484 EGKVEAARELIEEMKSRG-----------------IKPDHISYNTLISGYSKRGDMKDAF 526

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++ +E    G      TY  L+ GL K
Sbjct: 527 RVRDEMLSIGFNPTLLTYNALIQGLCK 553



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 197/370 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYNTI+     +G++   R +   MK +G+ P+  TY   +SG CK G 
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  +++ M +    P   TYN LI+G+CN G LE AF  R +M    L+P V TYN 
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  F   +  EA  +I E+ E G+ P++VT+NI+I  YC+ G + KA  +   M   G
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTY +LI    K G M++A  + + + RKG+  + I  N ++   C    +D A+
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAF 456

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    +     DEV++ TL+ G  R+ K   A +L +EMK R I P   +YN +I G 
Sbjct: 457 AMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G  + A  + +E+L  G  P   T+N +I G C   + + A Q   +M+ K   P+ 
Sbjct: 517 SKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576

Query: 361 VTCNILLSGL 370
            T   L+ G+
Sbjct: 577 NTYLSLIEGI 586



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 159/339 (46%), Gaps = 19/339 (5%)

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE-KKLDEAYMLLNSASKRGYYL 253
           N    ++ E F  + V  R  L + T  L  +L   CCE K+ D+A+   +    +G   
Sbjct: 96  NSGVYSIREVFNELGV-ARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIP 154

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
              +   +++ + +  +  +A  L+ EM   +I  S  T+N MI  L + GK ++A + +
Sbjct: 155 HVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFI 214

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             +   G+ P+  T+NTIIHG+CS G+VE A    + M  +  KPD  T    +SG+C+E
Sbjct: 215 GLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKE 274

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G LE+A          G    +VTYNTLI   C +  LE AF    +M  + L P   TY
Sbjct: 275 GKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTY 334

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +  AL    +++EA      M E G +                 P S++Y+  IN +C
Sbjct: 335 NMLIHALFLDCKMDEADGIIKEMSEKGLV-----------------PDSVTYNILINGYC 377

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             G  K A  + +E   KGI   + TY +L+  L KR +
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 38/235 (16%)

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           +S +  ++ ++ +L E + SG+      FN +       G     L        K++   
Sbjct: 78  ISHAPNSKPSLQLLKETINSGVYSIREVFNEL-------GVARGVLGI------KTY--- 121

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY--NTLISSLCKERRLEDAFGL 417
            V  ++L+   C     + A + F   ++KGK V    +  N ++S   K  R E A+ L
Sbjct: 122 -VLYDLLIRACCELKRGDDAFECFD--MMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVL 178

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
            +EM   ++     T+  +   L + G+L++A++F  +M   G                 
Sbjct: 179 YAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG----------------- 221

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I P+ ++Y+  I+ +CS+GR + A  IF+  + +G+  +  TY + ++G+ K  K
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 267/528 (50%), Gaps = 70/528 (13%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  PD V+YNT+L+  FK+G  ++      +M  +G++P+  TY+ +++  CK   + 
Sbjct: 194 GGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMD 253

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +AM V++ M +N  +PD  TYN +++G+C++G  +EA    K+M S  + P+VVTY++L+
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTH----------------------------- 153
           N   ++GRS EA K+ D + + G++P+  T+                             
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373

Query: 154 ------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
                 NI+I  Y K+ K+D+A  +   M ++G +P+ V Y T+ID  CK+G++++A   
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            + M  +GL  N I   +++H LC   K D+A  L+     RG  L+ + + ++I  + +
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + +   + KL+D M    + P   TYN +I G   +GK ++A  +L  ++  G+ PD  T
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------------- 368
           + T+I+G+C   +++ AL    +MV     P+I+T NI+L                    
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613

Query: 369 ----------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                           GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R++
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 673

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +A  L +      L PD  TY+ +   L+E G LEE       M E G
Sbjct: 674 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 269/532 (50%), Gaps = 21/532 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY  ++    + G+L+     L ++ K+G   +  T+  L+ G C      +AM +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +PDV++YN L+ G C+    +EA  L   M   +     PDVV+YNT++N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G S +A+    E+ + GI P+ VT++ +I   CK   +DKA +++  M +NG  P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           DC+TYN+++   C +G  +EA   +  M   G++ N +T +++++ LC   +  EA  + 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S +KRG   D  +Y TL+ GY           L D M    I P    +N +I   ++ 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K +QA+ + +++ Q G+ P+   + T+I   C  G V+ A+ +  +M+++   P+I+  
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GLC     +KA +     + +G  ++++ +N++I S CKE R+ ++  L   M  
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD  TY  +      +G+++EA K  + MV  G                 + P  +
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG-----------------VKPDIV 552

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +Y   IN +C   R  DAL +F+E    G++ N  TY  ++ GL   R++ +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 242/463 (52%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC+PD  +YN +L  L  + +  E  +LL   +D +  G  P+  +YN +++G+ K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G   +A      M     LPDV TY+ +I   C A  +++A  +   M    ++PD +T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN++++ +  SG+  EA   + ++   G++PN VT++ ++ + CK G+  +A KI  +M 
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  PD  TY TL+      G + E   ++D+M R G++ +    N ++     ++K+D
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A ++ +   + G   + V YGT+I    +    + A+  +++M +  + P+   Y ++I
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL    K ++A +++ E+L  G+  +   FN+II   C EG+V ++ +  + MV    K
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 513

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PDI+T N L+ G C  G +++A K   S +  G   D VTY TLI+  C+  R++DA  L
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM    + P+  TY  I   L  + R   A++    + ++G
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 235/452 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY+++++ L K G+  E R +   M K+GL P+  TY  L+ GY   G 
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   PD   +N+LI  +     +++A  +  +M    L P+VV Y T
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +SG   +A    +++ + G+ PN + +  +I   C   K DKA +++  M + G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + +N++ID++CK G + E+ ++ D+M R G+K + IT NT++   C   K+DEA 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+YGTLI GY R  + + AL L+ EM    + P+  TYN ++ GL
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 656

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G +++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 657 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 716

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           MEE     D     +I   L++ G +  A  +
Sbjct: 717 MEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 208/422 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TY T+L     KG L E+  LL  M + G+ P+   +NIL+  Y K   + +A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M Q+   P+V  Y  +I+  C +G +++A    ++M    L P+++ Y +LI+ 
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                +  +A +LI E+ + GI  N +  N +I  +CKEG++ ++ K+   M   G  PD
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 515

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTLID  C AG M+EA +++  M   G+K + +T  T+++  C   ++D+A  L  
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + ++Y  ++ G F   +   A +L+  + +        TYN ++ GL ++ 
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T++A+ M   L  + +  +  TFN +I      G++++A             PD+ T +
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++   L  +G LE+    F S    G + DS   N+++  L +   +  A   L  ++EK
Sbjct: 696 LMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755

Query: 425 KL 426
             
Sbjct: 756 HF 757



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 198/389 (50%), Gaps = 27/389 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P   T+ I+I   C+ G++D     + N+ + GF  D +T+  L+   C      +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA- 146

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLN-SASKR--GYYLDEVSY 258
             MD++ R+    G   +  + N +L  LC E +  EA  LL+  A  R  G   D VSY
Sbjct: 147 --MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            T++ G+F++  +++A   + EM +R I+P   TY+++I  L ++   ++A+++LN +++
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G++PD  T+N+I+HG+CS GQ ++A+    KM     +P++VT + L++ LC+ G   +
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A K F S   +G   D  TY TL+     +  L +   LL  M    + PD + +  +  
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           A  +  ++++A    S M + G                 ++P+ + Y   I+  C  G  
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHG-----------------LNPNVVCYGTVIDVLCKSGSV 427

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGL 527
            DA+  FE+   +G+  N   Y +L++GL
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 172/368 (46%), Gaps = 2/368 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG- 59
           M   G  P+ V Y T++D L K G +++       M  +GL PN   Y  L+ G C    
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           W K    +++++ +   L  ++ +N +I+  C  G + E+ +L   M  + + PD++TYN
Sbjct: 462 WDKAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+    +G+  EA KL+  +   G+KP+ VT+  +I  YC+  ++D A  + + M  +
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G SP+ +TYN ++           A  +   + + G ++   T N ILH LC     DEA
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +  +       L+  ++  +I    +  + + A  L+       ++P   TY+ M   
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  E+  D+   + ++G   D    N+I+      G + +A  +   + EK F  +
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLE 760

Query: 360 IVTCNILL 367
             T + LL
Sbjct: 761 ASTASFLL 768



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 21/253 (8%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           ++ P+  TY  +I    ++G+ +     L  +++ G   D  TF  ++ G C++ +   A
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 345 LQF-HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK---GKAVDSVTYNT 400
           +     +M E    PD+ + N LL GLC E   ++AL+           G   D V+YNT
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +++   KE   + A+    EM ++ + PD  TY++I  AL ++  +++A +  + MV+ G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            + P  ++Y+  ++ +CS G+ K+A+   ++ R  G+  N  TY
Sbjct: 267 -----------------VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309

Query: 521 MNLMNGLIKRRKS 533
            +LMN L K  +S
Sbjct: 310 SSLMNYLCKNGRS 322



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TYNT++D     GK++E   LL+ M   G+ P+  TY  L++GYC++  
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI--------------------------------- 87
           + +A+ +   M  +   P++ TYN+++                                 
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626

Query: 88  --NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
             +G C   + +EA R+ + +    L  +  T+N +I    + GR  EA  L      +G
Sbjct: 627 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+  T+++M +   ++G +++   +  +MEENG S D    N+++    + G++  A 
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAG 746

Query: 206 RMMDVMGRKGLKMNTITLNTILHT 229
             + ++  K   +   T + +L +
Sbjct: 747 TYLFMIDEKHFSLEASTASFLLES 770



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 8/199 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN IL  LF   +    ++L   + K G     +TYNI++ G CK   
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636

Query: 61  LKEAMRVVDLMTQNKSLPDVW----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
             EA+R    M QN  L D+     T+N++I      G ++EA  L     +  L+PDV 
Sbjct: 637 TDEALR----MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 692

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY+ +     E G   E   L   ++E+G   ++   N +++   + G I +A   +  +
Sbjct: 693 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 752

Query: 177 EENGFSPDCVTYNTLIDAN 195
           +E  FS +  T + L++++
Sbjct: 753 DEKHFSLEASTASFLLESS 771


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 267/528 (50%), Gaps = 70/528 (13%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  PD V+YNT+L+  FK+G  ++      +M  +G++P+  TY+ +++  CK   + 
Sbjct: 194 GGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMD 253

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +AM V++ M +N  +PD  TYN +++G+C++G  +EA    K+M S  + P+VVTY++L+
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTH----------------------------- 153
           N   ++GRS EA K+ D + + G++P+  T+                             
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373

Query: 154 ------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
                 NI+I  Y K+ K+D+A  +   M ++G +P+ V Y T+ID  CK+G++++A   
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            + M  +GL  N I   +++H LC   K D+A  L+     RG  L+ + + ++I  + +
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + +   + KL+D M    + P   TYN +I G   +GK ++A  +L  ++  G+ PD  T
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS------------------- 368
           + T+I+G+C   +++ AL    +MV     P+I+T NI+L                    
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613

Query: 369 ----------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                           GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R++
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 673

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +A  L +      L PD  TY+ +   L+E G LEE       M E G
Sbjct: 674 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 269/532 (50%), Gaps = 21/532 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY  ++    + G+L+     L ++ K+G   +  T+  L+ G C      +AM +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +PDV++YN L+ G C+    +EA  L   M   +     PDVV+YNT++N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G S +A+    E+ + GI P+ VT++ +I   CK   +DKA +++  M +NG  P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           DC+TYN+++   C +G  +EA   +  M   G++ N +T +++++ LC   +  EA  + 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S +KRG   D  +Y TL+ GY           L D M    I P    +N +I   ++ 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K +QA+ + +++ Q G+ P+   + T+I   C  G V+ A+ +  +M+++   P+I+  
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GLC     +KA +     + +G  ++++ +N++I S CKE R+ ++  L   M  
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD  TY  +      +G+++EA K  + MV  G                 + P  +
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG-----------------VKPDIV 552

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +Y   IN +C   R  DAL +F+E    G++ N  TY  ++ GL   R++ +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 242/463 (52%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC+PD  +YN +L  L  + +  E  +LL   +D +  G  P+  +YN +++G+ K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G   +A      M     LPDV TY+ +I   C A  +++A  +   M    ++PD +T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN++++ +  SG+  EA   + ++   G++PN VT++ ++ + CK G+  +A KI  +M 
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  PD  TY TL+      G + E   ++D+M R G++ +    N ++     ++K+D
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A ++ +   + G   + V YGT+I    +    + A+  +++M +  + P+   Y ++I
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL    K ++A +++ E+L  G+  +   FN+II   C EG+V ++ +  + MV    K
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 513

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PDI+T N L+ G C  G +++A K   S +  G   D VTY TLI+  C+  R++DA  L
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM    + P+  TY  I   L  + R   A++    + ++G
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 235/452 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY+++++ L K G+  E R +   M K+GL P+  TY  L+ GY   G 
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   PD   +N+LI  +     +++A  +  +M    L P+VV Y T
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +SG   +A    +++ + G+ PN + +  +I   C   K DKA +++  M + G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + +N++ID++CK G + E+ ++ D+M R G+K + IT NT++   C   K+DEA 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+YGTLI GY R  + + AL L+ EM    + P+  TYN ++ GL
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 656

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G +++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 657 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 716

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           MEE     D     +I   L++ G +  A  +
Sbjct: 717 MEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 208/422 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TY T+L     KG L E+  LL  M + G+ P+   +NIL+  Y K   + +A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M Q+   P+V  Y  +I+  C +G +++A    ++M    L P+++ Y +LI+ 
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                +  +A +LI E+ + GI  N +  N +I  +CKEG++ ++ K+   M   G  PD
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 515

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTLID  C AG M+EA +++  M   G+K + +T  T+++  C   ++D+A  L  
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + ++Y  ++ G F   +   A +L+  + +        TYN ++ GL ++ 
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T++A+ M   L  + +  +  TFN +I      G++++A             PD+ T +
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++   L  +G LE+    F S    G + DS   N+++  L +   +  A   L  ++EK
Sbjct: 696 LMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755

Query: 425 KL 426
             
Sbjct: 756 HF 757



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 198/389 (50%), Gaps = 27/389 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P   T+ I+I   C+ G++D     + N+ + GF  D +T+  L+   C      +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA- 146

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLN-SASKR--GYYLDEVSY 258
             MD++ R+    G   +  + N +L  LC E +  EA  LL+  A  R  G   D VSY
Sbjct: 147 --MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            T++ G+F++  +++A   + EM +R I+P   TY+++I  L ++   ++A+++LN +++
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G++PD  T+N+I+HG+CS GQ ++A+    KM     +P++VT + L++ LC+ G   +
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A K F S   +G   D  TY TL+     +  L +   LL  M    + PD + +  +  
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           A  +  ++++A    S M + G                 ++P+ + Y   I+  C  G  
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHG-----------------LNPNVVCYGTVIDVLCKSGSV 427

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGL 527
            DA+  FE+   +G+  N   Y +L++GL
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 21/253 (8%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           ++ P+  TY  +I    ++G+ +     L  +++ G   D  TF  ++ G C++ +   A
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 345 LQF-HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK---GKAVDSVTYNT 400
           +     +M E    PD+ + N LL GLC E   ++AL+           G   D V+YNT
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +++   KE   + A+    EM ++ + PD  TY++I  AL ++  +++A +  + MV+ G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            + P  ++Y+  ++ +CS G+ K+A+   ++ R  G+  N  TY
Sbjct: 267 -----------------VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309

Query: 521 MNLMNGLIKRRKS 533
            +LMN L K  +S
Sbjct: 310 SSLMNYLCKNGRS 322



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TYNT++D     GK++E   LL+ M   G+ P+  TY  L++GYC++  
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI--------------------------------- 87
           + +A+ +   M  +   P++ TYN+++                                 
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 626

Query: 88  --NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
             +G C   + +EA R+ + +    L  +  T+N +I    + GR  EA  L      +G
Sbjct: 627 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 686

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+  T+++M +   ++G +++   +  +MEENG S D    N+++    + G++  A 
Sbjct: 687 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAG 746

Query: 206 RMMDVMGRKGLKMNTITLNTILHT 229
             + ++  K   +   T + +L +
Sbjct: 747 TYLFMIDEKHFSLEASTASFLLES 770



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 8/199 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN IL  LF   +    ++L   + K G     +TYNI++ G CK   
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636

Query: 61  LKEAMRVVDLMTQNKSLPDVW----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
             EA+R    M QN  L D+     T+N++I      G ++EA  L     +  L+PDV 
Sbjct: 637 TDEALR----MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 692

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY+ +     E G   E   L   ++E+G   ++   N +++   + G I +A   +  +
Sbjct: 693 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 752

Query: 177 EENGFSPDCVTYNTLIDAN 195
           +E  FS +  T + L++++
Sbjct: 753 DEKHFSLEASTASFLLESS 771


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 161/535 (30%), Positives = 269/535 (50%), Gaps = 9/535 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY+T+++ L   G++NE  DL+ +M   G++P   T    +   C +G  ++A
Sbjct: 450 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 509

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M      P+V+TY  LI+G C +G+L+ A  L   M    + P+ VTYN LIN 
Sbjct: 510 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 569

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             E+ R   AF +++ +  +G+  N VT+N MIK YC  G   KA  ++ NM + G S +
Sbjct: 570 LVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 629

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT+I   C +GN   A R++D+M   G K +  +   ++   C   K++ A+ L N
Sbjct: 630 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 689

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +EV+Y  LI GY +DEK + A  L + MK     P+  TYN +I GL++  
Sbjct: 690 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 749

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A ++   +++ G+ P+  T+  +I G C  G    AL+  NKM+E+   P+++T +
Sbjct: 750 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 809

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  L +EG +E+A   F      G   D +TY  +I +     ++E AF  L  M + 
Sbjct: 810 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 869

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSI--MVETGKINHQVVQPNT----SKTPEEI 478
              P  +TY  +   L     L + Q+  ++  +V      +Q    +     S    E+
Sbjct: 870 GCQPTLWTYGVLIKGLKNEYLLAD-QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 928

Query: 479 DPS-SISYSEKINEHCS-QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           DP  S+     +  + S  GR+ +A ++      +G+  ++  Y +L+  L++ R
Sbjct: 929 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 983



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 256/523 (48%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN +++AL K G + +   ++  + +  + P+  TY  ++ G+C+   L  A
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V + M +    P+  TY+ LING C++G + EAF L +EM    +LP   T    I  
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A++L  ++   G +PN  T+  +I   C  G +  A  +   M  +G  P+
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+   +   ++ AF ++++MGR GL  N +T N ++   C      +A +++N
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  +RG+  + V+Y T+I GY        AL++ D M++    P  ++Y  +I G  +  
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  + NE++  G+ P+E T+  +I G+C + +++ A      M     +P++ T N
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+ GL ++     A +  +  I +G   + VTY  +I  LCK      A  + ++M E+
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY+++  AL + G++EEA+   + +   G I                 P  I+
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI-----------------PDEIT 842

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y + I  +   G+ + A        + G      TY  L+ GL
Sbjct: 843 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 251/521 (48%), Gaps = 17/521 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            Y+ +L  L + G    V D    M  +G+ PN   YN +++  CK G + +A  ++  +
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +++  PD +TY  +I G C    L+ A ++  +M      P+ VTY+TLIN   +SGR 
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EAF LI E+  HGI P A T    I   C  G  + A ++  +M+  G  P+  TY  L
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C +G ++ A  +   M R G+  NT+T N +++ L   +++  A+++LN   + G 
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + + V+Y  +I GY       +A+ + + M +R    +  TYN +I G   SG T  A+ 
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+ +   G  PDE ++  +I GFC   ++E A    N+MV+    P+ VT   L+ G C
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++  L+ A          G   +  TYN LI  L K+     A  L   M E+ + P+  
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 771

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY A+   L ++G    A +  + M+E G +                 P+ ++YS  I  
Sbjct: 772 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCL-----------------PNLLTYSSLIRA 814

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              +G+ ++A  +F E  + G+  ++ TY+ ++   I   K
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 855



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 260/538 (48%), Gaps = 38/538 (7%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  GC P+  TY  ++  L   G L     L   M + G+ PN  TYN L++   +   
Sbjct: 516  MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +K A  V++LM +N    ++ TYN +I G+C  G  ++A  +   M       ++VTYNT
Sbjct: 576  IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +I  + +SG +  A +++D + + G KP+  ++  +I  +CK  K++ A  +   M ++G
Sbjct: 636  IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              P+ VTY  LID  CK   ++ A  +++ M R G + N  T N ++H L  +     A 
Sbjct: 696  LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     + G + + V+Y  +I G  ++   + AL+++++M E+  +P+  TY+++I  L
Sbjct: 756  ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             Q GK E+A ++  EL + G+IPDE T+  +I  +   G+VE A  F  +M++   +P +
Sbjct: 816  GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 875

Query: 361  VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS- 419
             T  +L+ GL  E +L            +  A+  V  N    S   +   +DA  ++S 
Sbjct: 876  WTYGVLIKGLKNEYLLADQ---------RLAALPDVVPNC---SFGYQTTDQDAVSVMSA 923

Query: 420  EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            ++ E   G       A+ + L  +GR  EA +    M+  G                 + 
Sbjct: 924  KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG-----------------LC 966

Query: 480  PSSISYSEKINEHCSQGRYKD---ALQIFEETRQKGIAINKSTYMNLMNGL--IKRRK 532
            P   +Y+  +   CS  R ++   A+ +F+    +G  ++ + Y  L+  L  + RRK
Sbjct: 967  PDQEAYNSLL---CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 1021



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 228/512 (44%), Gaps = 17/512 (3%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++ +   K  +      L  + + GL      Y+ L+    +LG     M     M    
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P++  YN +IN  C  G + +A  + K++   ++ PD  TY ++I           A 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           ++ +++ + G +PN VT++ +I   C  G++++A  ++R M  +G  P   T    I A 
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C  G  E+A+R+   M  KG + N  T   ++  LC    L  A  L +  S+ G + + 
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y  LI     + +   A  + + M    +  +  TYN MI G    G  ++A+ ++N 
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +LQ G   +  T+NTII G+C  G    AL+  + M +   KPD  +   L+ G C+   
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +E A   F   +  G   + VTY  LI   CK+ +L+ A  LL  M+     P+  TY  
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L +      A++   +M+E G                 I P+ ++Y+  I+  C  
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEG-----------------IFPNVVTYTAMIDGLCKN 783

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           G    AL++F +  ++G   N  TY +L+  L
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 221/511 (43%), Gaps = 59/511 (11%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+ VTYN +++ L +  ++     +L+ M + GL  N  TYN ++ GYC LG  K+A
Sbjct: 555  GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA 614

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            M V++ M Q     ++ TYN +I G+C++G    A R+   M      PD  +Y  LI  
Sbjct: 615  MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F +  +   AF L +E+ + G+ PN VT+  +I  YCK+ K+D A  ++ +M+ +G  P+
Sbjct: 675  FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              TYN LI    K  N   A  +  VM  +G+  N +T   ++  LC       A  + N
Sbjct: 735  VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               ++G   + ++Y +LI    ++ K   A  L+ E++   ++P   TY  MI     SG
Sbjct: 795  KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGF--------------------CSEG----- 339
            K E A + L  ++++G  P   T+  +I G                     CS G     
Sbjct: 855  KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 914

Query: 340  --------------------QVEKAL--------------QFHNKMVEKSFKPDIVTCNI 365
                                QV+ AL              +    M+ +   PD    N 
Sbjct: 915  QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 974

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            LL  L R   ++ A+  F+    +G  V    Y  LI +LC+  R ++A      M  + 
Sbjct: 975  LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 1034

Query: 426  LGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
              PD    A +   L+  G  +   +F  IM
Sbjct: 1035 WNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 1065



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 206/488 (42%), Gaps = 59/488 (12%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G   + VTYN ++      G   +   ++++M ++G   N  TYN ++ GYC  G    A
Sbjct: 590  GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +R++DLM      PD W+Y  LI G+C    +E AF L  EM    L P+ VTY  LI+ 
Sbjct: 650  LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            + +  +   A  L++ +   G +PN  T+N++I    K+     A ++ + M E G  P+
Sbjct: 710  YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             VTY  +ID  CK G+   A  M + M  +G   N +T ++++  L  E K++EA  L  
Sbjct: 770  VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 829

Query: 245  SASKRGYYLDEVS-----------------------------------YGTLITG----Y 265
               + G   DE++                                   YG LI G    Y
Sbjct: 830  ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 889

Query: 266  FRDEKANRALK--------------------LWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               ++   AL                     +  ++ E     S    NA++  LS +G+
Sbjct: 890  LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 949

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
              +A ++L  ++  G+ PD+  +N+++        V+ A+     M  +  +  +     
Sbjct: 950  WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 1009

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            L+  LC+    ++A   F + +++    D V    LI  L ++   +     L  ME ++
Sbjct: 1010 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 1069

Query: 426  LGPDRYTY 433
              P  + Y
Sbjct: 1070 YMPSFHIY 1077



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 17/272 (6%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI      E   R +   D + +  +    F Y+A++  LS+ G T   +D  + +L  G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+   +N +I+  C +G V  A     K+ E    PD  T   ++ G CR+  L+ AL
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           + F     +G   ++VTY+TLI+ LC   R+ +AF L+ EM    + P  +T      AL
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G  E+A +    M   G                  +P+  +Y+  I+  C  G  K 
Sbjct: 501 CDMGCYEDAWRLFVDMKNKG-----------------CEPNVYTYTALISGLCVSGLLKV 543

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A+ +F    + G+  N  TY  L+N L++ R+
Sbjct: 544 AIGLFHRMSRDGVFPNTVTYNALINILVENRR 575



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 11/292 (3%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GCLP+ +TY++++ AL ++GK+ E  +L +++++ GL+P+  TY  ++  Y   G ++ A
Sbjct: 800  GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               +  M +    P +WTY +LI G  N  +L +        + L  LPDVV   +   +
Sbjct: 860  FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD--------QRLAALPDVVPNCSFGYQ 911

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +          + ELD  G+  +    N ++      G+  +A +++ +M   G  PD
Sbjct: 912  TTDQDAVSVMSAKLAELDP-GL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               YN+L+ +  +  N++ A  +   M  +G +++      ++  LC   +  EA +   
Sbjct: 969  QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 1028

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
            +   R +  D+V    LI G  RD   +  ++    M+ R+ MPS   Y  +
Sbjct: 1029 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 254/455 (55%), Gaps = 9/455 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++ AL  + +L+E R  L +M  + L PN  TY +L+ G CK G + EA+ +
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K +P   TYN LI+G C A    EA+ L +EM     +PD+ TY TLI  F +
Sbjct: 104 LSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-PDCV 186
           S +S +A ++ ++L   G +P+ VT++ +I   CKEG++ +A  +   M ++G   P+ V
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+LI   C+ G M+EA  +++ M   G   + +T  T+++  C   +LD+AY LLN  
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           +++G   D V++ +L+ G  R+ + + A+ +  EM+ +   P+ +TYN ++ G  ++ + 
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A   + E +     P+  +FN +I G C   +  +A++   +   +   PD+V    +
Sbjct: 343 EEARKFMLEEMDCP--PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400

Query: 367 LSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           + GLCRE  +++A + +R  + + G   +S+TY+TL++ LC    L+ A G +    EK 
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKG 456

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             P+  TY  +  A  ++ R E+A++    MV+ G
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 265/515 (51%), Gaps = 26/515 (5%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D VTY +++  L K  +L +    L  M  +G  P+  TY  ++   C    L EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           + ++ M      P+V TY +LI+G C  G ++EA  L  +M   K +P  VTYN+LI+  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++ R+ EA+ L++E+   G  P+  T+  +I  +CK  K D A ++   +   GF PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEAYMLLN 244
           VTY+ LID  CK G ++EA  +   M + G  M NT+T N+++   C   K+DEA  LL 
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   D V+Y TL+ G+ +  + + A  L ++M  + + P   T+ +++ GL +  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A+ +L E+ +    P   T+NTI+ G+C   Q+E+A +F   + E    P++V+ N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFN 363

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM-EE 423
           I++ GLC+     +A++       +    D V Y T+I  LC+E+++++A  +  +M EE
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P+  TY+ + T L  +G L+ A+ +    +E G +                 P+  
Sbjct: 424 PGCLPNSITYSTLVTGLCNAGMLDRARGY----IEKGCV-----------------PNIG 462

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
           +Y+  I+      R +DA ++ ++  Q+G  + +S
Sbjct: 463 TYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQS 497



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 217/422 (51%), Gaps = 25/422 (5%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D VTY +LI    +  R  +A   + ++   G  P+  T+  +I   C E ++ +A K +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M     +P+ VTY  LID  CK G ++EA  ++  M RK      +T N+++  LC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           ++  EAY LL      G   D  +Y TLITG+ + +K++ AL++++++  R   P   TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           + +I GL + G+ ++AID+   +++SG  +P+  T+N++I GFC  G++++A+    +M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           E    PD+VT   L++G C+   L+ A         KG   D VT+ +L+  LC+E RL 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           DA  +L EM  K   P  YTY  I      + +LEEA+KF                    
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML------------------ 350

Query: 473 KTPEEID--PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              EE+D  P+ +S++  I   C   R  +A+++ EE R++    +   Y  +++GL + 
Sbjct: 351 ---EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407

Query: 531 RK 532
           +K
Sbjct: 408 KK 409



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 222/460 (48%), Gaps = 22/460 (4%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           ++  N    D  TY  LI G C    LE+A     +M S    PDV TY  +I+      
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R  EA K ++E+    + PN VT+ ++I   CK G++D+A  ++  M +    P  VTYN
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +LI   CKA    EA+ +++ M   G   +  T  T++   C  KK D+A  +      R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           G+  D V+Y  LI G  ++ +   A+ L+  M K    MP+T TYN++I G  + GK ++
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++L  + ++G  PD  T+ T+++GFC   +++ A    N+M  K   PD+VT   L+ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLCRE  L  A+        K  +    TYNT++   C+  +LE+A   +  +EE    P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPP 357

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  ++  +   L +  R  EA +    +VE  +                 +P  + Y+  
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAME----LVEEAR-------------RRRCNPDVVMYTTV 400

Query: 489 INEHCSQGRYKDALQIFEET-RQKGIAINKSTYMNLMNGL 527
           I+  C + +  +A +++ +   + G   N  TY  L+ GL
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 190/354 (53%), Gaps = 8/354 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+PD  TY T++    K  K ++   +   +  +G  P+  TY+ L+ G CK G LKEA
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204

Query: 65  MRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           + +   M ++ S +P+  TYN LI+G+C  G ++EA  L + M      PDVVTY TL+N
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F +  R  +A+ L++++   G+ P+ VT   ++   C+E ++  A  I+  M     SP
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              TYNT++D  C+A  +EEA + M  +       N ++ N ++  LC   +  EA  L+
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV 382

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQ 302
             A +R    D V Y T+I G  R++K + A +++ +M +E   +P++ TY+ ++ GL  
Sbjct: 383 EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN 442

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +G  ++A       ++ G +P+  T+N +I  F    + E A +  + MV++ F
Sbjct: 443 AGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 18/179 (10%)

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           S   D VT   L+ GLC+   LE+AL F    + KG   D  TY  +I +LC E RL +A
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
              L EM  + L P+  TY  +   L + GR++EA    S      K+  + V       
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLS------KMRKKCV------- 112

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                P++++Y+  I+  C   R  +A  + EE    G   +  TY  L+ G  K +KS
Sbjct: 113 -----PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  GCLP+++TY+T++  L   G L+  R  +    ++G VPN  TYN+L+  + K   
Sbjct: 421 LEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANR 476

Query: 61  LKEAMRVVDLMTQ 73
            ++A  ++D M Q
Sbjct: 477 DEDARELLDDMVQ 489


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 266/536 (49%), Gaps = 33/536 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+ T+L  L    +++E  DL   + +    P+  T+  L++G C+ G + E
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVE 200

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLI 122
           A+ ++D M +N   PD  TY   ++G C  G    A  L ++ME +  + P+VV Y+ +I
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  ++  L  E+ + GI PN VT+N MI  +C  G+   A ++++ M E   S
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ VTYN LI+A  K G   EA  + D M  +G+  NTIT N+++   C + +LD A  +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   D  ++ TLI GY   ++ +  ++L  EM  R ++ +T TYN +I G   
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-------- 354
            G    A+D+  +++ SG+ PD  T NT++ G C  G+++ AL+    M +         
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500

Query: 355 ---SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                +PD++T NIL+ GL  EG   +A + +     +G   D++TY+++I  LCK+ RL
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           ++A  +   M  K   P+  T+  +     ++GR+++  +    M   G +   ++    
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII---- 616

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                        Y   I      G    AL IF+E    G+  +  T  N++ G 
Sbjct: 617 -------------YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659



 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 166/580 (28%), Positives = 277/580 (47%), Gaps = 69/580 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +N ++ A+ +  + + V  L   M+++ +  +  ++ IL+  +C    L  A+ 
Sbjct: 78  LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+  L++G C    + EA  L  ++      PDV+T+ TL+N   
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLC 193

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E+G++P+ +T+   +   CK G    A  ++R MEE +   P+ 
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID  CK G   ++  +   M  KG+  N +T N ++   C   +   A  LL  
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    + V+Y  LI  + ++ K   A +L+DEM  R I+P+T TYN+MI G  +  +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 306 TEQAIDM-----------------------------------LNELLQSGMIPDETTFNT 330
            + A DM                                   L+E+ + G++ +  T+NT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGFC  G +  AL    +M+     PDIVTCN LL GLC  G L+ AL+ F+      
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D +TYN LI  L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L +  RL+EA   T + V  G               +   P+ ++++  IN +C  GR  
Sbjct: 554 LCKQSRLDEA---TQMFVSMGS--------------KSFSPNVVTFNTLINGYCKAGRVD 596

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           D L++F E  ++GI  +   Y+ L+ G  ++  +I+ A+D
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGF-RKVGNINGALD 635



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 233/457 (50%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKE 63
           G  PD +TY T +D + K G      +LL  M++   + PN   Y+ ++ G CK G   +
Sbjct: 212 GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  +   M      P++ TYN +I G+C +G    A RL +EM   K+ P+VVTYN LIN
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T+N MI  +CK+ ++D A  +   M   G SP
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T+ TLID  C A  +++   ++  M R+GL  NT+T NT++H  C    L+ A  L 
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 451

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 452 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLT 511

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q    M 
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 571

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT N L++G C+ G ++  L+ F     +G   D++ Y TLI    K   + 
Sbjct: 572 SKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 631

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T       LE A
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 254/508 (50%), Gaps = 11/508 (2%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
           L +  DL SDM +   +P+   +N L+    ++      + +   M + +   D++++ +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI  +C+   L  A     ++  L L PDVVT+ TL++      R  EA  L  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
            +P+ +T   ++   C+EG++ +A  ++  M ENG  PD +TY T +D  CK G+   A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 206 RMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            ++  M     +K N +  + I+  LC + +  +++ L      +G + + V+Y  +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           +    + + A +L  EM ER+I P+  TYNA+I    + GK  +A ++ +E+L  G+IP+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+N++I GFC + +++ A      M  K   PD+ T   L+ G C    ++  ++   
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +G   ++VTYNTLI   C    L  A  L  +M    + PD  T   +   L ++G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L++A +    M +  K++     P        ++P  ++Y+  I    ++G++ +A ++
Sbjct: 478 KLKDALEMFKAM-QKSKMDLDASHPFNG-----VEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +EE   +GI  +  TY ++++GL K+ +
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSR 559



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 211/454 (46%), Gaps = 59/454 (12%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y+ I+D L K G+ ++  +L  +M+ +G+ PN  TYN ++ G+C  G    A R+
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K  P+V TYN LIN +   G   EA  L  EM    ++P+ +TYN++I+ F +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 128 SGR----------------SMEAF-------------------KLIDELDEHGIKPNAVT 152
             R                S + F                   +L+ E+   G+  N VT
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +I  +C  G ++ A  + + M  +G  PD VT NTL+D  C  G +++A  M   M 
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           +  + ++                         S    G   D ++Y  LI G   + K  
Sbjct: 491 KSKMDLDA------------------------SHPFNGVEPDVLTYNILICGLINEGKFL 526

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L++EM  R I+P T TY++MI GL +  + ++A  M   +      P+  TFNT+I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G+C  G+V+  L+   +M  +    D +    L+ G  + G +  AL  F+  I  G  
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
            D++T   +++    +  LE A  +L +++  +L
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 173/323 (53%), Gaps = 11/323 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TYN+++D   K+ +L+   D+   M  +G  P+  T+  L+ GYC    + + 
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M +   + +  TYN LI+G+C  G L  A  L ++M S  + PD+VT NTL++ 
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK +     +LD     +G++P+ +T+NI+I     EGK  +A ++ 
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M   MG K    N +T NT+++  C  
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   D + Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 593 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652

Query: 294 NAMIWGLSQSGKTEQAIDMLNEL 316
             M+ G     + E+A+ ML +L
Sbjct: 653 RNMLTGFWSKEELERAVAMLEDL 675



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 163/293 (55%), Gaps = 11/293 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD  T+ T++D      ++++  +LL +M ++GLV N  TYN L+ G+C +G L  A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-----------LP 113
           + +   M  +   PD+ T N L++G C+ G L++A  + K M+  K+            P
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           DV+TYN LI      G+ +EA +L +E+   GI P+ +T++ MI   CK+ ++D+A ++ 
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
            +M    FSP+ VT+NTLI+  CKAG +++   +   MGR+G+  + I   T+++     
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 627

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
             ++ A  +       G Y D ++   ++TG++  E+  RA+ + ++++  Q+
Sbjct: 628 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 22/305 (7%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           K L++A  L +   +       + +  L+    R E+ +  + L+ +M+ +QI    +++
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             +I       K   A+    +L + G+ PD  TF T++HG C + +V +AL   +++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC- 178

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              +PD++T   L++GLCREG + +A+      +  G   D +TY T +  +CK      
Sbjct: 179 ---RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 414 AFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           A  LL +MEE   + P+   Y+AI   L + GR  ++      M + G            
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG------------ 283

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P+ ++Y+  I   C  GR+  A ++ +E  ++ I+ N  TY  L+N  +K  K
Sbjct: 284 -----IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 533 SISKA 537
               A
Sbjct: 339 FFEAA 343



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 20/267 (7%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L +G +  +    A+ L+ +M   + +PS   +N ++  + +  + +  I +  ++ +  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +  D  +F  +I  FCS  ++  AL    K+ +    PD+VT   LL GLC +  + +AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
             F          D +T+ TL++ LC+E R+ +A  LL  M E  L PD+ TY      +
Sbjct: 172 DLFHQICRP----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G    A      M E   I+H             I P+ + YS  I+  C  GR+ D
Sbjct: 228 CKMGDTVSALNLLRKMEE---ISH-------------IKPNVVIYSAIIDGLCKDGRHSD 271

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  +F E + KGI  N  TY  ++ G 
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGF 298


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 243/460 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ V  N +++   + G +     + + + K G VP+  T+  L  G C  G 
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A    D +       D  +Y  LI+G C  G    A  L + ++   + P+VV YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EAF L  E+   GI P+ VT++ +I  +C  GK+  A  +   M    
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+N L++A CK G M+E   + D+M ++G+K N +T N+++   C  K++++A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N+ ++ G   D  SY  +I G+ + +K + A+ L+ EM  + I+P   TY+++I GL
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+SG+   A+ +++++   G+ P+  T+N+I+   C   QV+KA+    K  +K F+PDI
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDI 470

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T +IL+ GLC+ G LE A K F   ++KG  +D   Y  +I   C E    +A  LLS+
Sbjct: 471 STYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSK 530

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ME+    PD  TY  I  +L +    + A+K    M+  G
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 208/450 (46%), Gaps = 18/450 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           +++A  L   +      P    +N ++    +S        L  +++  GIKPN V  NI
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C+ G I  A  +   + + G+ PD +T+ TL    C  G +++AF   D +   G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              + I+  T++H LC   +   A  LL          + V Y T+I    + +  N A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L+ EM  + I P   TY+A+I G    GK + AID+ N+++   + PD  TFN +++ F
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C +G++++     + M+++  KP+ VT N L+ G C    + KA   F +    G   D 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            +Y+ +I+  CK ++ ++A  L  EM  K + PD  TY+++   L +SGR+  A +    
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 456 MVETGKI---------------NHQV---VQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
           M + G                  HQV   +   T    +   P   +YS  I   C  G+
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +DA ++FE+   KG  ++   Y  ++ G 
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 203/425 (47%), Gaps = 18/425 (4%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           + ++Y++    F  +    +A  L + L      P A   N ++    K         + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           + ME  G  P+ V  N LI+  C+ G +  AF +   + + G   +TIT  T+   LC +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++ +A++  +     G++ D++SYGTLI G  +  +   AL L   +    + P+   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I  + +     +A D+ +E++  G+ PD  T++ +I GFC  G+++ A+   NKM+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           ++ KPD+ T NIL++  C++G +++    F   + +G   + VTYN+L+   C  + +  
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  + + M +  + PD  +Y+ +     +  + +EA      M       H+        
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM-------HR-------- 393

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             + I P  ++YS  I+     GR   ALQ+ ++   +G+  N  TY ++++ L K  + 
Sbjct: 394 --KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ- 450

Query: 534 ISKAV 538
           + KA+
Sbjct: 451 VDKAI 455



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 37/334 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+ ++      GKL +  DL + M  + + P+  T+NILV+ +CK G +KE 
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 65  MRVVDLMTQN-------------------------KSL----------PDVWTYNMLING 89
             V D+M +                          KS+          PD+ +Y+++ING
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +C     +EA  L KEM    ++PDVVTY++LI+   +SGR   A +L+D++ + G+ PN
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+N ++   CK  ++DKA  ++   ++ GF PD  TY+ LI   C++G +E+A ++ +
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE 494

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            +  KG  ++      ++   C E   +EA  LL+     G   D  +Y  +I   F+ +
Sbjct: 495 DLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           + + A KL  EM  R  +P  F Y+  +  L+Q+
Sbjct: 555 ENDMAEKLLREMIARG-LPLNF-YDLYLTRLAQT 586



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 86/150 (57%), Gaps = 2/150 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TYN+ILDAL K  ++++   LL+  K +G  P+ +TY+IL+ G C+ G 
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L++A +V  DL+ +  +L DV+ Y ++I G+C  G+  EA  L  +ME    +PD  TY 
Sbjct: 486 LEDARKVFEDLLVKGYNL-DVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYE 544

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            +I   F+   +  A KL+ E+   G+  N
Sbjct: 545 IIILSLFKKDENDMAEKLLREMIARGLPLN 574


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 247/473 (52%), Gaps = 13/473 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-------LVPNRTTYNILVS 53
           M+   C P  VTYNT+LD LF+ GKL     L  +M  +          PN  TY++L+ 
Sbjct: 140 MKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLID 199

Query: 54  GYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           G CK   + +A+ +++ M      PDV TY +L++G C    +  A+ + +EM     +P
Sbjct: 200 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 259

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           ++VTYN+L++    + R  +A  L+ ++   G  PN VT+  +I   CK G++  AC ++
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 319

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
            +M + G +PD + YN LI+  CKA  ++E+  ++      G+K + +T +++++ LC  
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            +LDEA  LL     RG   D + Y TLI G  +  K + A  L++ M          TY
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTY 439

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           + +I GL ++G+ ++A  +L  +++ G  P   T+N++I G C    +++A++   +M  
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 499

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFF-----RSWILKGKAVDSVTYNTLISSLCKE 408
            +  P  VT NIL+ G+CR   ++ A+        R     G A+D++ Y++LI  LCK 
Sbjct: 500 SNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKA 559

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT-SIMVETG 460
            R+ +A     EM +  + PD  TY+ +   L +S  L E +      MV+ G
Sbjct: 560 GRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 264/538 (49%), Gaps = 19/538 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G + D V Y  +L  L+K+ +L++   +L +M+  G  PN  TYN L+ G CK   
Sbjct: 70  MQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNE 129

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-------KLLP 113
              A  + + M   +  P + TYN L++G    G LE A  L +EM          +  P
Sbjct: 130 PDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           +V+TY+ LI+   ++ R  +A +L++ +   G  P+ +T+ I++   CKE K+  A +++
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R M + G  P+ VTYN+L+   C+A  + +A  +M  M  +G   N +T  T++  LC  
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 309

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++ +A  +L     +G   D + Y  LI G  + ++ + ++ L        I P   TY
Sbjct: 310 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 369

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           +++I+GL +S + ++A  +L  +   G  PD   ++T+I G C  G+V++A   +  M  
Sbjct: 370 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG 429

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                D+VT + L+ GLC+ G +++A       +  G    ++TYN+LI  LC    L++
Sbjct: 430 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDE 489

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  L+ EME     P   TY  +   +    R++ A     +++E  K            
Sbjct: 490 AIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA----VVLLEQAKARCVAAGGTALD 545

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           T        I+YS  I+  C  GR  +AL  F+E    G+  +  TY  L+ GL K +
Sbjct: 546 T--------IAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSK 595



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 265/540 (49%), Gaps = 24/540 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD  TY  +L    + G++++ +    +M+ + LVPN    +IL+ G CK     +A+
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R    M  +  + D   Y  L++G      L++A  +  EM      P+VVTYN+LI+  
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-------EE 178
            ++     A +L + +      P+ VT+N ++    + GK+++A  + + M        +
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +  SP+ +TY+ LID  CKA  + +A  +++ M  +G   + IT   ++  LC E K+  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+ +L      G   + V+Y +L+ G  R  + + AL L  +M  R   P+  TY  +I 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL + G+ + A  ML +++  G  PD   +N +I+G C   QV++++    + V    KP
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+VT + ++ GLCR   L++A +       +G   D + Y+TLI  LCK  ++++AF L 
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             M       D  TY+ +   L ++GR++EA    + MV  G             TP   
Sbjct: 425 EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG-------------TP--- 468

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            PS+++Y+  I   C      +A+++ EE  +   A +  TY  L++G+ +  +  S  V
Sbjct: 469 -PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVV 527



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 203/418 (48%), Gaps = 26/418 (6%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           +P+  T+  +++ +C+ G+ID+A +    M      P+    + LID  CKA    +A R
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
               M   G+  +T+    +L  L  EK+LD+A  +L+     G   + V+Y +LI G  
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL-------QS 319
           ++ + +RA +L++ MK  +  PS  TYN ++ GL ++GK E+A+ +  E+L         
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
              P+  T++ +I G C   +V +A++    M  +   PD++T  IL+ GLC+E  +  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            +  R  +  G   + VTYN+L+  LC+ RR+ DA  L+ +M  +   P+  TY  +   
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQP---NTSKTPEEID---------------PS 481
           L + GR+++A    + M++ G     ++     N     +++D               P 
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++YS  I   C   R  +A ++    + +G   +   Y  L++GL K  K + +A D
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK-VDEAFD 422


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 259/523 (49%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD    N IL  L  +  L++ +++   M++ G+ P   TYN ++  YCK G + +A
Sbjct: 175 GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M +    P+  TYN+L+NG    G LE+A  L +EM +  L     TYN LIN 
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G  +EAF L++E+      P   T+N ++   CK  ++        +M ++ F+PD
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V++N+L+   C+ G + EAF + D +  + L    IT NT++H LC    LD A  L  
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + +G + D  +Y  L+ G F+    + A   ++EM  + + P  F YN  I G  +  
Sbjct: 415 EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIA 474

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T  A  M  E+L +G  PD  T+N  +H  C +G  E+A      MV     PD VT  
Sbjct: 475 DTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYT 534

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++G  + G L KA + F   + KG A   VTY  LI +   ++ L+ AF   S+M EK
Sbjct: 535 SIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEK 594

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  +  TY AI   L  + R++EA K+   M E G                 I P+  S
Sbjct: 595 SVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG-----------------ILPNKFS 637

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  INE C+ G +++AL+++ E   + I  +  T+   +  L
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 242/477 (50%), Gaps = 4/477 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG  P  VTYNT+LD+  K+G++++  +LLS+M+++G  PN  TYN+LV+G  K G 
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A  +++ M  +      +TYN LING+C  G+  EAF L +EM + +  P + TYNT
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    +  +         ++ +    P+ V+ N ++  YC+ G I +A  +   ++   
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  +TYNTLI   C  G ++ A R+   M  +GL  +  T   +++       +  A 
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              N    +G   D  +Y T I G  +    + A  + +EM      P   TYN  +  L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  E+A D+L  ++  G+IPD  T+ +II+GF   G + KA +  N+M+ K   P +
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+     + +L+ A  +F   + K    + +TYN +I+ LC  RR+++A+    E
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM----VETGKINHQVVQPNTSK 473
           MEEK + P++++Y  +       G  EEA +    M    ++     H V   N  +
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 237/484 (48%), Gaps = 23/484 (4%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           ++L++G+         + V D M +N  LPDV   N ++    +  +L +A  +   ME 
Sbjct: 155 DVLIAGHVX------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQ 208

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + P VVTYNT+++ + + GR  +A +L+ E+ E G  PN VT+N+++    K+G++++
Sbjct: 209 FGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQ 268

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  ++  M  +G +    TYN LI+  C+ G   EAF +++ M  +       T NT+++
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   ++    +  +   K  +  D VS+ +L+ GY R    + A  L+DE+K R ++P
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN +I GL   G  + A+ +  E+   G+ PD  T+  +++G    G V  A  F 
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N+M+ K  KPD    N  + G  +      A       +  G   D +TYN  + +LC++
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
              E+A  LL  M    L PD  TY +I    V++G L +A++  + M+  G        
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-------- 560

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + PS ++Y+  I+ H ++     A   F +  +K +  N  TY  ++NGL 
Sbjct: 561 ---------VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 529 KRRK 532
             R+
Sbjct: 612 MTRR 615



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 219/447 (48%), Gaps = 35/447 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P++VTYN +++ L KKG+L + + L+ +M   GL  +  TYN L++G+C+ G 
Sbjct: 241 MQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGL 300

Query: 61  LKEAMRVVDLMTQNKSLP-----------------------------------DVWTYNM 85
             EA  +V+ M   ++ P                                   D+ ++N 
Sbjct: 301 FVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNS 360

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+ G+C  G + EAF L  E++   L+P V+TYNTLI+     G    A +L  E+ + G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+  T+ I++    K G +  A      M   G  PD   YNT I    K  +   AF
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAF 480

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            M + M   G   + IT N  +H LC +   +EA  LL +    G   D V+Y ++I G+
Sbjct: 481 SMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGF 540

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++    +A ++++EM  + + PS  TY  +I   +     + A    +++L+  +  + 
Sbjct: 541 VKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANV 600

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N II+G C   ++++A ++ ++M EK   P+  +  IL++  C  G  E+AL+ +R 
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLE 412
            + +    DS T++  + +L ++ ++ 
Sbjct: 661 MLDRKIQPDSFTHSVFLKNLHRDYQVH 687


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 259/523 (49%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD    N IL  L  +  L++ +++   M++ G+ P   TYN ++  YCK G + +A
Sbjct: 175 GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M +    P+  TYN+L+NG    G LE+A  L +EM +  L     TYN LIN 
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G  +EAF L++E+      P   T+N ++   CK  ++        +M ++ F+PD
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V++N+L+   C+ G + EAF + D +  + L    IT NT++H LC    LD A  L  
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + +G + D  +Y  L+ G F+    + A   ++EM  + + P  F YN  I G  +  
Sbjct: 415 EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIA 474

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T  A  M  E+L +G  PD  T+N  +H  C +G  E+A      MV     PD VT  
Sbjct: 475 DTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYT 534

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++G  + G L KA + F   + KG A   VTY  LI +   ++ L+ AF   S+M EK
Sbjct: 535 SIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEK 594

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  +  TY AI   L  + R++EA K+   M E G                 I P+  S
Sbjct: 595 SVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG-----------------ILPNKFS 637

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  INE C+ G +++AL+++ E   + I  +  T+   +  L
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 242/477 (50%), Gaps = 4/477 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG  P  VTYNT+LD+  K+G++++  +LLS+M+++G  PN  TYN+LV+G  K G 
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A  +++ M  +      +TYN LING+C  G+  EAF L +EM + +  P + TYNT
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    +  +         ++ +    P+ V+ N ++  YC+ G I +A  +   ++   
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  +TYNTLI   C  G ++ A R+   M  +GL  +  T   +++       +  A 
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              N    +G   D  +Y T I G  +    + A  + +EM      P   TYN  +  L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  E+A D+L  ++  G+IPD  T+ +II+GF   G + KA +  N+M+ K   P +
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+     + +L+ A  +F   + K    + +TYN +I+ LC  RR+++A+    E
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM----VETGKINHQVVQPNTSK 473
           MEEK + P++++Y  +       G  EEA +    M    ++     H V   N  +
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 237/484 (48%), Gaps = 23/484 (4%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           ++L++G+         + V D M +N  LPDV   N ++    +  +L +A  +   ME 
Sbjct: 155 DVLIAGHVX------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQ 208

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + P VVTYNT+++ + + GR  +A +L+ E+ E G  PN VT+N+++    K+G++++
Sbjct: 209 FGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQ 268

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  ++  M  +G +    TYN LI+  C+ G   EAF +++ M  +       T NT+++
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   ++    +  +   K  +  D VS+ +L+ GY R    + A  L+DE+K R ++P
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN +I GL   G  + A+ +  E+   G+ PD  T+  +++G    G V  A  F 
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N+M+ K  KPD    N  + G  +      A       +  G   D +TYN  + +LC++
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
              E+A  LL  M    L PD  TY +I    V++G L +A++  + M+  G        
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-------- 560

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + PS ++Y+  I+ H ++     A   F +  +K +  N  TY  ++NGL 
Sbjct: 561 ---------VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 529 KRRK 532
             R+
Sbjct: 612 MTRR 615



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 219/447 (48%), Gaps = 35/447 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P++VTYN +++ L KKG+L + + L+ +M   GL  +  TYN L++G+C+ G 
Sbjct: 241 MQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGL 300

Query: 61  LKEAMRVVDLMTQNKSLP-----------------------------------DVWTYNM 85
             EA  +V+ M   ++ P                                   D+ ++N 
Sbjct: 301 FVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNS 360

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+ G+C  G + EAF L  E++   L+P V+TYNTLI+     G    A +L  E+ + G
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+  T+ I++    K G +  A      M   G  PD   YNT I    K  +   AF
Sbjct: 421 LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAF 480

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            M + M   G   + IT N  +H LC +   +EA  LL +    G   D V+Y ++I G+
Sbjct: 481 SMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGF 540

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++    +A ++++EM  + + PS  TY  +I   +     + A    +++L+  +  + 
Sbjct: 541 VKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANV 600

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N II+G C   ++++A ++ ++M EK   P+  +  IL++  C  G  E+AL+ +R 
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLE 412
            + +    DS T++  + +L ++ ++ 
Sbjct: 661 MLDRKIQPDSFTHSVFLKNLHRDYQVH 687



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 1/363 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V++N++L    + G ++E   L  ++K + LVP   TYN L+ G C  G+L  A+R+
Sbjct: 353 PDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL 412

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              MT     PD++TY +L+NG    G +  A     EM S  L PD   YNT I    +
Sbjct: 413 KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMK 472

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
              +  AF + +E+   G  P+ +T+N+ +   C++G  ++AC ++ NM  +G  PD VT
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y ++I+   K G++ +A  + + M  KG+  + +T   ++H    ++ LD A+M  +   
Sbjct: 533 YTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKML 592

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++    + ++Y  +I G     + + A K +DEM+E+ I+P+ F+Y  +I      G  E
Sbjct: 593 EKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWE 652

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+L   + PD  T +  +     + QV  A+Q    +++       V   +L+
Sbjct: 653 EALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQNVEDNINVRIEMLI 711

Query: 368 SGL 370
            GL
Sbjct: 712 GGL 714


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 266/536 (49%), Gaps = 33/536 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT+ T+L  L    +++E  DL   + +    P+  T+  L++G C+ G + E
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVE 200

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLI 122
           A+ ++D M +N   PD  TY   ++G C  G    A  L ++ME +  + P+VV Y+ +I
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  ++  L  E+ + GI PN VT+N MI  +C  G+   A ++++ M E   S
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ VTYN LI+A  K G   EA  + D M  +G+  NTIT N+++   C + +LD A  +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               + +G   D  ++ TLI GY   ++ +  ++L  EM  R ++ +T TYN +I G   
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-------- 354
            G    A+D+  +++ SG+ PD  T NT++ G C  G+++ AL+    M +         
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500

Query: 355 ---SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                +PD++T NIL+ GL  EG   +A + +     +G   D++TY+++I  LCK+ RL
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           ++A  +   M  K   P+  T+  +     ++GR+++  +    M   G +   ++    
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII---- 616

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                        Y   I      G    AL IF+E    G+  +  T  N++ G 
Sbjct: 617 -------------YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 166/580 (28%), Positives = 277/580 (47%), Gaps = 69/580 (11%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +N ++ A+ +  + + V  L   M+++ +  +  ++ IL+  +C    L  A+ 
Sbjct: 78  LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
               +T+    PDV T+  L++G C    + EA  L  ++      PDV+T+ TL+N   
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLC 193

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDC 185
             GR +EA  L+D + E+G++P+ +T+   +   CK G    A  ++R MEE +   P+ 
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ +ID  CK G   ++  +   M  KG+  N +T N ++   C   +   A  LL  
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +R    + V+Y  LI  + ++ K   A +L+DEM  R I+P+T TYN+MI G  +  +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 306 TEQAIDM-----------------------------------LNELLQSGMIPDETTFNT 330
            + A DM                                   L+E+ + G++ +  T+NT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR------ 384
           +IHGFC  G +  AL    +M+     PDIVTCN LL GLC  G L+ AL+ F+      
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 385 -----SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S    G   D +TYN LI  L  E +  +A  L  EM  + + PD  TY+++   
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L +  RL+EA   T + V  G               +   P+ ++++  IN +C  GR  
Sbjct: 554 LCKQSRLDEA---TQMFVSMGS--------------KSFSPNVVTFNTLINGYCKAGRVD 596

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           D L++F E  ++GI  +   Y+ L+ G  ++  +I+ A+D
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGF-RKVGNINGALD 635



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 233/457 (50%), Gaps = 12/457 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKE 63
           G  PD +TY T +D + K G      +LL  M++   + PN   Y+ ++ G CK G   +
Sbjct: 212 GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  +   M      P++ TYN +I G+C +G    A RL +EM   K+ P+VVTYN LIN
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G+  EA +L DE+   GI PN +T+N MI  +CK+ ++D A  +   M   G SP
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T+ TLID  C A  +++   ++  M R+GL  NT+T NT++H  C    L+ A  L 
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 451

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-----------IMPSTFT 292
                 G   D V+  TL+ G   + K   AL+++  M++ +           + P   T
Sbjct: 452 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLT 511

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   GK  +A ++  E+   G++PD  T++++I G C + ++++A Q    M 
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 571

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            KSF P++VT N L++G C+ G ++  L+ F     +G   D++ Y TLI    K   + 
Sbjct: 572 SKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 631

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            A  +  EM    + PD  T   + T       LE A
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 254/508 (50%), Gaps = 11/508 (2%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
           L +  DL SDM +   +P+   +N L+    ++      + +   M + +   D++++ +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI  +C+   L  A     ++  L L PDVVT+ TL++      R  EA  L  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
            +P+ +T   ++   C+EG++ +A  ++  M ENG  PD +TY T +D  CK G+   A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 206 RMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            ++  M     +K N +  + I+  LC + +  +++ L      +G + + V+Y  +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           +    + + A +L  EM ER+I P+  TYNA+I    + GK  +A ++ +E+L  G+IP+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+N++I GFC + +++ A      M  K   PD+ T   L+ G C    ++  ++   
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +G   ++VTYNTLI   C    L  A  L  +M    + PD  T   +   L ++G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L++A +    M +  K++     P        ++P  ++Y+  I    ++G++ +A ++
Sbjct: 478 KLKDALEMFKAM-QKSKMDLDASHPFNG-----VEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +EE   +GI  +  TY ++++GL K+ +
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSR 559



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 209/450 (46%), Gaps = 59/450 (13%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y+ I+D L K G+ ++  +L  +M+ +G+ PN  TYN ++ G+C  G    A R+
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K  P+V TYN LIN +   G   EA  L  EM    ++P+ +TYN++I+ F +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 128 SGR----------------SMEAF-------------------KLIDELDEHGIKPNAVT 152
             R                S + F                   +L+ E+   G+  N VT
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +I  +C  G ++ A  + + M  +G  PD VT NTL+D  C  G +++A  M   M 
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           +  + ++                         S    G   D ++Y  LI G   + K  
Sbjct: 491 KSKMDLDA------------------------SHPFNGVEPDVLTYNILICGLINEGKFL 526

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L++EM  R I+P T TY++MI GL +  + ++A  M   +      P+  TFNT+I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G+C  G+V+  L+   +M  +    D +    L+ G  + G +  AL  F+  I  G  
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            D++T   +++    +  LE A  +L +++
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 11/326 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TYN+++D   K+ +L+   D+   M  +G  P+  T+  L+ GYC    + + 
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M +   + +  TYN LI+G+C  G L  A  L ++M S  + PD+VT NTL++ 
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472

Query: 125 FFESGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             ++G+   ++E FK +     +LD     +G++P+ +T+NI+I     EGK  +A ++ 
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD +TY+++ID  CK   ++EA +M   MG K    N +T NT+++  C  
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D+   L     +RG   D + Y TLI G+ +    N AL ++ EM    + P T T 
Sbjct: 593 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS 319
             M+ G     + E+A+ ML +L  S
Sbjct: 653 RNMLTGFWSKEELERAVAMLEDLQMS 678



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 22/305 (7%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           K L++A  L +   +       + +  L+    R E+ +  + L+ +M+ +QI    +++
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             +I       K   A+    +L + G+ PD  TF T++HG C + +V +AL   +++  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC- 178

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              +PD++T   L++GLCREG + +A+      +  G   D +TY T +  +CK      
Sbjct: 179 ---RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 414 AFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           A  LL +MEE   + P+   Y+AI   L + GR  ++      M + G            
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG------------ 283

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P+ ++Y+  I   C  GR+  A ++ +E  ++ I+ N  TY  L+N  +K  K
Sbjct: 284 -----IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 533 SISKA 537
               A
Sbjct: 339 FFEAA 343



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 20/267 (7%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L +G +  +    A+ L+ +M   + +PS   +N ++  + +  + +  I +  ++ +  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +  D  +F  +I  FCS  ++  AL    K+ +    PD+VT   LL GLC +  + +AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
             F          D +T+ TL++ LC+E R+ +A  LL  M E  L PD+ TY      +
Sbjct: 172 DLFHQICRP----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G    A      M E   I+H             I P+ + YS  I+  C  GR+ D
Sbjct: 228 CKMGDTVSALNLLRKMEE---ISH-------------IKPNVVIYSAIIDGLCKDGRHSD 271

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  +F E + KGI  N  TY  ++ G 
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGF 298


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 267/526 (50%), Gaps = 19/526 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N ++ AL  +G++ +   +  DM  +G  P+  TY+IL+   CK    ++AM +
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL 308

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD+ TYN+LIN  CN G ++EA  +   + S    PD VTY  ++     
Sbjct: 309 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCG 368

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S R  E  +L+ E+  +   P+ VT N ++   C++G +D+A ++V +M E+G   D VT
Sbjct: 369 SERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++++D  C  G +++A  ++  +   G K +TI   T+L  LC  ++ + A  L+    
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 DEV++ T++    +    +RA+++ ++M E    P   TYN +I GL      +
Sbjct: 489 CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCID 548

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++L++L   G  PD  TFNT++ G C   + E A Q    M+  +  PD +T N ++
Sbjct: 549 DAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVI 608

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G+L +A++  +     G   +S TY+ ++ +L K  + + A  LLS M      
Sbjct: 609 TSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT-- 666

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  + + L ++G++EEA     +MV  G                 + P + +Y  
Sbjct: 667 PDLITYNTVISNLTKAGKMEEALDLLRVMVSNG-----------------LCPDTTTYRS 709

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                C +     A+++    +  G++ + + Y +++ G  + R++
Sbjct: 710 LAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRT 755



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 266/528 (50%), Gaps = 23/528 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYNT+++   + G++ + R L++ M      P+  T+N L+   C  G + +A+ V D 
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDD 276

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P V TY++L++  C      +A  L  EM +    PD+VTYN LIN     G 
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA  ++  L  HG KP+AVT+  ++K  C   +  +  +++  M  N  +PD VT+NT
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++ + C+ G ++ A  ++D M   G   + +T ++IL  LC   ++D+A  LL+     G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D ++Y T++ G    E+  RA +L  EM      P   T+N ++  L Q G  ++AI
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            ++ ++ ++G  PD  T+N II G C+E  ++ A++  + +     KPDIVT N LL GL
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C     E A +   + +      D +T+NT+I+SLC++  L  A   L  M E    P+ 
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ +  AL+++G+ + A +  S M              T+ TP+      I+Y+  I+
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGM--------------TNGTPD-----LITYNTVIS 677

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
                G+ ++AL +       G+  + +TY +L  G + R     +AV
Sbjct: 678 NLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYG-VCREDGTDRAV 724



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 260/519 (50%), Gaps = 25/519 (4%)

Query: 17  LDALFKKGKLNEVRDLLSDMKKQGL--VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN 74
           L +L ++G+++E   L   M   G    P     NIL+   C  G + +A RV   +  +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
            +   V TYN ++NG+C AG +E+A RL   +  +   PD  T+N LI      GR  +A
Sbjct: 217 AT---VVTYNTMVNGYCRAGRIEDARRL---INGMPFPPDTFTFNPLIRALCVRGRIPDA 270

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
             + D++   G  P+ VT++I++   CKE    +A  ++  M   G  PD VTYN LI+A
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C  G+++EA  ++  +   G K + +T   +L +LC  ++  E   LL   +      D
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
           EV++ T++T   +    +RA+++ D M E   +    TY++++ GL   G+ + A+++L+
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            L   G  PD   + T++ G CS  Q E+A +   +M+     PD VT N +++ LC++G
Sbjct: 451 RLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG 510

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
           ++++A++        G + D VTYN +I  LC E  ++DA  LLS+++     PD  T+ 
Sbjct: 511 LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFN 570

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   L    R E+A++  + M+              S  P    P  ++++  I   C 
Sbjct: 571 TLLKGLCGVDRWEDAEQLMANMMR-------------SNCP----PDELTFNTVITSLCQ 613

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +G    A++  +   + G   N STY  +++ L+K  K+
Sbjct: 614 KGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKA 652



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 248/471 (52%), Gaps = 8/471 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +   GC PD VTY  +L +L    +  EV +LL++M      P+  T+N +V+  C+ G 
Sbjct: 347 LPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGL 406

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ VVD M+++  + D+ TY+ +++G C+ G +++A  L   ++S    PD + Y T
Sbjct: 407 VDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 466

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     + +   A +L+ E+      P+ VT N ++   C++G +D+A ++V  M ENG
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG 526

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VTYN +ID  C    +++A  ++  +   G K + +T NT+L  LC   + ++A 
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAE 586

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+ +  +     DE+++ T+IT   +     +A++    M E   +P++ TY+ ++  L
Sbjct: 587 QLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDAL 646

Query: 301 SQSGKTEQAIDMLNELLQSGMI---PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            ++GK + A+++L     SGM    PD  T+NT+I      G++E+AL     MV     
Sbjct: 647 LKAGKAQAALELL-----SGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD  T   L  G+CRE   ++A++  R     G + D+  YN ++   C++RR + A   
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDC 761

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            + M      PD  TY  +  AL   G L+EA++  + +   G ++ ++++
Sbjct: 762 FAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKLIE 812


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 236/450 (52%), Gaps = 15/450 (3%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
              +M++ G +PN  TYN ++ GYCKL    EA   +  M      P++ T+NM+ING C
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G L+E   +  EM     +PD VTYNTL+N + + G   +A  L  E+  +G+ PN V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+  +I   CK G +++A +    M   G  P+  TY T+I+   + G ++EA+R+++ M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            R G   + +T N +++  C   +++EA  LL     +G   D VSY T+I+G+ R+++ 
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +RA ++  EM  + ++P   TY+++I GL +  +  +A DM  E+L   + PDE T+ T+
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+ +C EG + KAL  H++M++K F PD VT N+L++GL ++   ++A +          
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364

Query: 392 AVDSVTYNTLISS---------------LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
              +VTYNTLI +                C +  +++A  +   M  K   P+   Y  I
Sbjct: 365 IPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQV 466
                  G + +A K    MV    + H V
Sbjct: 425 IHGHCRIGNVLKAYKLYKEMVHVDFVPHTV 454



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 235/459 (51%), Gaps = 15/459 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+ VTYNT++D   K  + +E    L  M  +GL PN  T+N++++G C+ G 
Sbjct: 9   MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKE   V+  M++   +PD  TYN L+NG+C  G   +A  L  EM    L P+VVTY +
Sbjct: 69  LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   ++G    A +  D++   G+ PN  T+  +I  + ++G +D+A +++  M  +G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P  VTYN LI+ +C  G MEEA  ++  M  KG+  + ++ +TI+      ++LD A+
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +    D V+Y +LI G     +   A  ++ EM   ++ P  FTY  +I   
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A+ + +E++Q G +PD  T+N +I+G   + + ++A +   K+      P  
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSA 368

Query: 361 VT--------CNI-------LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT        CNI       L+ G C +G++++A + F S I K    +   YN +I   
Sbjct: 369 VTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGH 428

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           C+   +  A+ L  EM      P   T  A+  AL   G
Sbjct: 429 CRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEG 467



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 199/363 (54%), Gaps = 17/363 (4%)

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           +  + ME NG  P+ VTYNT+ID  CK    +EAF  +  MG KGL+ N IT N I++ L
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C + +L E   +L   S++GY  DEV+Y TL+ GY ++   ++AL L  EM    + P+ 
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TY ++I  + ++G   +A++  +++   G+ P+E T+ TII+GF  +G +++A +  N+
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M    F P IVT N L++G C  G +E+A+   +  + KG   D V+Y+T+IS   + + 
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L+ AF +  EM  K + PD  TY+++   L E  RL EA      M+             
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML------------- 290

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           T K P    P   +Y+  IN +C +G    AL + +E  QKG   +  TY  L+NGL K+
Sbjct: 291 TIKLP----PDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQ 346

Query: 531 RKS 533
            +S
Sbjct: 347 ARS 349



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 15/230 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY T+++A  K+G LN+   L  +M ++G +P+  TYN+L++G  K    KEA R+
Sbjct: 296 PDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355

Query: 68  VDLMTQNKSLPDVWTYNMLI---------------NGWCNAGMLEEAFRLRKEMESLKLL 112
           +  +  + S+P   TYN LI                G+C  G+++EA ++ + M +    
Sbjct: 356 LLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHK 415

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P+   YN +I+     G  ++A+KL  E+      P+ VT   ++K    EG   +  ++
Sbjct: 416 PNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEV 475

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           + ++  +    D      L++ N K GNM+  F ++  M + GL  +T T
Sbjct: 476 IGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 17/187 (9%)

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
            L+F  +M      P++VT N ++ G C+    ++A  F RS  LKG   + +T+N +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            LC++ RL++   +L EM  K   PD  TY  +     + G   +A    + MV  G   
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG--- 118

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         + P+ ++Y+  IN  C  G    A++ F++   +G+  N+ TY  +
Sbjct: 119 --------------LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTI 164

Query: 524 MNGLIKR 530
           +NG  ++
Sbjct: 165 INGFAQQ 171



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 15/194 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNIL------------- 51
           G LPD VTYN +++ L K+ +  E R LL  +     +P+  TYN L             
Sbjct: 328 GFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAV 387

Query: 52  --VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
             V G+C  G + EA +V + M      P+   YN++I+G C  G + +A++L KEM  +
Sbjct: 388 ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
             +P  VT   L+   F  G   E  ++I ++       +A    ++++   KEG +D  
Sbjct: 448 DFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMV 507

Query: 170 CKIVRNMEENGFSP 183
             ++  M ++G  P
Sbjct: 508 FNLLTEMAKDGLIP 521


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 237/453 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+N ++D L K+G+L E R L   MK  G  P+  TYN L+ GY K G L+E   +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  M ++    DV TYN LIN +   G +E+A+    EM+ L ++ +VVT +T ++ F +
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL  ++   G+ PN  T+  ++   CK G++D A  ++  M   G  P+ VT
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  ++D  CK G +  A  ++ +M R G+K N +   T++H     K  + A  LLN   
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  LD   YGTLI G  + +K + A  L  +M +  + P+T  Y  ++    ++GK  
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L+++  SG+ P+  T+  +I G C  G + +A+   +KM E    P++     L+
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+ G L KA+      + KG ++D V Y +LI    K+  L+ AF L ++M E  L 
Sbjct: 557 DGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            D Y Y    +       ++EA+   S M+ TG
Sbjct: 617 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 649



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 243/456 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD VTYN+++D   K G+L EV  L+S+M+K G   +  TYN L++ + K GW
Sbjct: 225 MKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGW 284

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A      M +   + +V T +  ++ +C  G++ EA +L  +M    ++P+  TY +
Sbjct: 285 IEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTS 344

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++GR  +A  L+DE+   G+ PN VT+ +M+   CKEGK+  A  ++  ME  G
Sbjct: 345 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAG 404

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + Y TLI  +    N E A  +++ M  KG++++     T++  LC  +KLDEA 
Sbjct: 405 VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   + V Y T++  +F+  K + A+ L  ++ +  + P+  TY A+I GL
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL 524

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +AI   +++ + G+ P+   + T+I GFC  G + KA+   N+MV+K    D 
Sbjct: 525 CKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDK 584

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+ G  ++G L+ A       I  G  +D   Y   IS  C    +++A G+LSE
Sbjct: 585 VVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSE 644

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           M    + PD+  Y  +     + G +EEA    + M
Sbjct: 645 MIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 269/559 (48%), Gaps = 62/559 (11%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPN-RTTYNILVSGYCKLGWLKEAMRVVDL 70
            ++T+L  L   G L++    L+ +++  + PN RT  +IL+    +L   ++   +V  
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILL----RLARNRQG-GLVRR 189

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + ++   P+V+T+N++I+  C  G L EA  L   M+++   PDVVTYN+LI+ + + G 
Sbjct: 190 LFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGE 249

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIK------W------------------------- 159
             E   L+ E+ + G   + VT+N +I       W                         
Sbjct: 250 LEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLST 309

Query: 160 ----YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
               +CKEG + +A K+   M   G  P+  TY +L+D  CKAG +++A  ++D M  +G
Sbjct: 310 FVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 369

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L  N +T   ++  LC E K+  A  +L+   + G   +E+ Y TLI G+F ++ + RAL
Sbjct: 370 LVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERAL 429

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L +EMK + +      Y  +IWGL +  K ++A  +L+++   G+ P+   + TI+  F
Sbjct: 430 DLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAF 489

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
              G+  +A+   +K+ +   +P++VT   L+ GLC+ G + +A+  F      G   + 
Sbjct: 490 FKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNV 549

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
             Y TLI   CK   L  A  L++EM +K +  D+  Y ++    ++ G L+ A    + 
Sbjct: 550 QVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAK 609

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M+ETG                 +      Y+  I+  C+    ++A  +  E    GI  
Sbjct: 610 MIETG-----------------LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 652

Query: 516 NKSTYMNLMNGLIKRRKSI 534
           +K+ Y    N LI++ + +
Sbjct: 653 DKTAY----NCLIRKYQKL 667



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 205/422 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  D VTYN +++   K G + +      +MK+ G++ N  T +  V  +CK G 
Sbjct: 260 MRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGL 319

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EAM++   M     +P+ +TY  L++G C AG L++A  L  EM    L+P+VVTY  
Sbjct: 320 VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 379

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G+   A  ++  ++  G+K N + +  +I  +      ++A  ++  M+  G
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   Y TLI   CK   ++EA  ++  M   GL+ NT+   TI+       K  EA 
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   + V+Y  LI G  +      A+  +D+M+E  + P+   Y  +I G 
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A+ ++NE++  GM  D+  + ++I G   +G ++ A     KM+E   + D+
Sbjct: 560 CKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDL 619

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                 +SG C   ++++A       I  G   D   YN LI    K   +E+A  L +E
Sbjct: 620 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNE 679

Query: 421 ME 422
           ME
Sbjct: 680 ME 681



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 235/485 (48%), Gaps = 36/485 (7%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L     +LP V  ++ L++   + G+L++A R    +  L++ P+  T N ++ R   + 
Sbjct: 125 LGPHRSALPSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNR 182

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +      L+  L EH   PN  T NI+I + CK+G++ +A  +   M+  G SPD VTYN
Sbjct: 183 QG----GLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYN 238

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +LID   K G +EE   ++  M + G   + +T N +++       +++AY       + 
Sbjct: 239 SLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRL 298

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   + V+  T +  + ++     A+KL+ +M+ R +MP+ FTY +++ G  ++G+ + A
Sbjct: 299 GVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 358

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           I +L+E++  G++P+  T+  ++ G C EG+V  A    + M     K + +    L+ G
Sbjct: 359 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHG 418

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
                  E+AL        KG  +D   Y TLI  LCK ++L++A  LL +M++  L P+
Sbjct: 419 HFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPN 478

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------------------ 471
              Y  I  A  ++G+  EA      + ++G      +QPN                   
Sbjct: 479 TVIYTTIMDAFFKAGKESEAVALLHKIPDSG------LQPNVVTYCALIDGLCKAGSIYE 532

Query: 472 -----SKTPE-EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                 K  E  +DP+   Y+  I+  C  G    A+ +  E   KG++++K  Y +L++
Sbjct: 533 AISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLID 592

Query: 526 GLIKR 530
           G +K+
Sbjct: 593 GHMKQ 597



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 18/268 (6%)

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           NR   L   + E    P+ FT+N +I  L + G+  +A  +   +   G  PD  T+N++
Sbjct: 181 NRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSL 240

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G+   G++E+     ++M +     D+VT N L++   + G +EKA  +F      G 
Sbjct: 241 IDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGV 300

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             + VT +T + + CKE  + +A  L ++M  + + P+ +TY ++     ++GRL++A  
Sbjct: 301 MANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 360

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               MV  G +                 P+ ++Y+  ++  C +G+   A  +     + 
Sbjct: 361 LLDEMVHQGLV-----------------PNVVTYTVMVDGLCKEGKVAVADDVLSLMERA 403

Query: 512 GIAINKSTYMNLMNGLIKRRKSISKAVD 539
           G+  N+  Y  L++G    + S  +A+D
Sbjct: 404 GVKANELLYTTLIHGHFMNKNS-ERALD 430



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 51/101 (50%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y +++D   K+G L     L + M + GL  +   Y   +SG+C +  ++EA  V+
Sbjct: 583 DKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVL 642

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
             M      PD   YN LI  +   G +EEA  L+ EMES+
Sbjct: 643 SEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESV 683


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 153/486 (31%), Positives = 246/486 (50%), Gaps = 45/486 (9%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+YNT+++  F++G++++  +L   M  +G+ P+  TYN ++ G CK   +
Sbjct: 296 QGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVV 355

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A  V   M      P   TYN LI+G+ + G  +E  RL +EM +  L PD   Y  L
Sbjct: 356 DRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALL 415

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++   ++GR  EA  + D +   GIKP+A+              ID+A  I   M + G 
Sbjct: 416 LDYLCKNGRCTEARNIFDSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGL 461

Query: 182 SPDCVTYNTLIDANCKAGNMEEA---------------------------FRMMDVMGRK 214
           SP+ V Y  LIDA CK G +++A                           F M+D    +
Sbjct: 462 SPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLD----Q 517

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G++++ +  NT++  LC E ++ EA  L+    + G   D +SY TL+ G+    + + A
Sbjct: 518 GIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEA 577

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            KL D M    + P+ FTYN ++ G  ++ + + A  +L E+L +G  PD  T+NTI+HG
Sbjct: 578 AKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHG 637

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
               G+  +A + +  M+    + D+ T NI+L+GLC+   +++A K F+S   KG  + 
Sbjct: 638 LFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLH 697

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            +T+N +I +L K  + EDA  L + +    L PD  TY  I   L++ G LEE     S
Sbjct: 698 IITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFS 757

Query: 455 IMVETG 460
            M E G
Sbjct: 758 AMEENG 763



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 255/549 (46%), Gaps = 58/549 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY+ ++    + G+L     +   + K G   N   +N L+ G C    L EA  +
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 68  VDL-MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTLIN 123
           +   M +    P+V +YN L+ G+CN    EEA  L   M   + L   PDVV+YNT+IN
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF  G+  +A+ L  ++ + GI P+ VT+N +I   CK   +D+A  + + M + G  P
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              TYN LI      G  +E  R+++ M    L+ +      +L  LC   +  EA  + 
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  ++G   D +               + A+ ++D+M+++ + P+   Y A+I  L + 
Sbjct: 433 DSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL 478

Query: 304 GKTEQAI-----------------------DMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           G+ + AI                       +++ E+L  G+  D   FNT++   C EG+
Sbjct: 479 GRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGR 538

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           V +A +    M+    +PD+++ N L+ G C  G  ++A K     +  G   +  TYNT
Sbjct: 539 VMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNT 598

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+   CK RR++DA+ LL EM      PD  TY  I   L ++GR  EA++    M+   
Sbjct: 599 LLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMI--- 655

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                      S+T  ++     +Y+  +N  C      +A ++F+    KG+ ++  T+
Sbjct: 656 ----------NSRTQWDM----YTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITF 701

Query: 521 MNLMNGLIK 529
             ++  L+K
Sbjct: 702 NIMIGALLK 710



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 231/491 (47%), Gaps = 45/491 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT++D L K   ++  + +   M  +G+ P+  TYN L+ GY   G  KE 
Sbjct: 334 GIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEV 393

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAG---------------------MLEEAFRLR 103
           +R+++ M+ +   PD + Y +L++  C  G                     M++EA  + 
Sbjct: 394 VRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIF 453

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAF-----------------------KLIDE 140
            +M    L P+VV Y  LI+   + GR  +A                        +L+ E
Sbjct: 454 DKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFE 513

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + + GI+ + V  N ++   C+EG++ +A +++  M   G  PD ++YNTL+D +C  G 
Sbjct: 514 MLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGR 573

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
            +EA +++DVM   GLK N  T NT+LH  C  +++D+AY LL      G   D V+Y T
Sbjct: 574 TDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNT 633

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           ++ G F+  + + A +L+  M   +     +TYN ++ GL ++   ++A  M   L   G
Sbjct: 634 ILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKG 693

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +     TFN +I      G+ E A+     +      PD+ T  ++   L +EG LE+  
Sbjct: 694 LQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELG 753

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
             F +    G A +S   N L+        +  A   LS+++EK    +  T A++  +L
Sbjct: 754 VLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEAST-ASMLISL 812

Query: 441 VESGRLEEAQK 451
              G  ++  K
Sbjct: 813 YSRGEYQQLAK 823



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 230/507 (45%), Gaps = 69/507 (13%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG----MLEEAF------RLRKEMESLKLL 112
           +A+++ DL+  +     V  +N L+     A      LE         R+ +E  S K+ 
Sbjct: 134 DALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVREC-SDKVA 192

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD  TY+ LI  F   GR    F +   + + G + N +  N ++K  C   ++D+A  I
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 173 VR-NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG-RKGLKM--NTITLNTILH 228
           +   M E G +P+ V+YNTL+   C     EEA  ++ VM   +GL    + ++ NT+++
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
               E ++D+AY L      RG   D V+Y T+I G  + +  +RA  ++ +M ++ + P
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S  TYN +I G   +GK ++ + +L E+    + PD   +  ++   C  G+  +A    
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           + ++ K  KPD               ++++A+  F     +G + + V Y  LI +LCK 
Sbjct: 433 DSVIRKGIKPD--------------AMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL 478

Query: 409 RRLEDA-----------FGLLS------------EMEEKKLGPDRYTYAAIHTALVESGR 445
            R++DA           +GL +            EM ++ +  D   +  +   L   GR
Sbjct: 479 GRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGR 538

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           + EAQ+   +M+  G                 + P  ISY+  ++ HC  GR  +A ++ 
Sbjct: 539 VMEAQRLIELMLRVG-----------------VRPDVISYNTLVDGHCLTGRTDEAAKLL 581

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRK 532
           +     G+  N+ TY  L++G  K R+
Sbjct: 582 DVMVSIGLKPNEFTYNTLLHGYCKARR 608



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 131/278 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD ++YNT++D     G+ +E   LL  M   GL PN  TYN L+ GYCK   + +A
Sbjct: 553 GVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDA 612

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M  N   PDV TYN +++G    G   EA  L   M + +   D+ TYN ++N 
Sbjct: 613 YSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNG 672

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    EAFK+   L   G++ + +T NIMI    K GK + A  +   +   G  PD
Sbjct: 673 LCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPD 732

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  + +   K G++EE   +   M   G   N+  LN ++        +  A   L+
Sbjct: 733 VETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLS 792

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
              ++ + L+  +   LI+ Y R E    A  L ++ +
Sbjct: 793 KLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPEKYR 830



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 114/227 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TYNT+L    K  ++++   LL +M   G  P+  TYN ++ G  + G 
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGR 643

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  +   M  +++  D++TYN+++NG C    ++EAF++ + + S  L   ++T+N 
Sbjct: 644 FSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNI 703

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + G+  +A  L   +  +G+ P+  T+ ++ +   KEG +++   +   MEENG
Sbjct: 704 MIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENG 763

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
            +P+    N L+      G++  A   +  +  K   +   T + ++
Sbjct: 764 TAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +G +PD  TY  I + L K+G L E+  L S M++ G  PN    N LV  +   G 
Sbjct: 724 ISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGD 783

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           +  A   +  + +     +  T +MLI+
Sbjct: 784 ISRAGAYLSKLDEKNFSLEASTASMLIS 811


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 256/530 (48%), Gaps = 48/530 (9%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G VP+   YN ++        L  A R  D M  +   P+V+TYN+LI   C  G  +EA
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
             + ++M      P+VVTYNTL+  FF +G    A +L+  + + G+KPN VT N M+  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CK GK++ A K+   M   G +PD V+YNTL+   CKAG   EA  +   M +KG+  +
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T  +++H +C    L+ A  L+    +RG  ++EV++  LI G+ +    + AL    
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M++ +I PS   YNA+I G    G+ ++A ++L+E+   G+ PD  T++TII  +C   
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
               A + + +M+EK   PD +T + L+  LC E  L  A   F++ I  G   D  TY 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT------ 453
           +LI   CKE  +E A  L  +M +  + PD  TY+ +   L +S R  EAQ+        
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529

Query: 454 ----------------------------------SIMVETGKINHQVVQPNTSKTPEEID 479
                                              +M E  K+   ++  N +     +D
Sbjct: 530 EPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN-----LD 584

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            S   YS  I+ HC  G    AL   ++  Q+G A N ++ ++L+ GL +
Sbjct: 585 GS--VYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 238/455 (52%), Gaps = 50/455 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC P+ VTYNT++ A F+ G+++    L+  M   GL PN  T+N +V+G CK G 
Sbjct: 176 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGK 235

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A +V D M +    PD  +YN L+ G+C AG   EA  +  EM    ++PDVVT+ +
Sbjct: 236 MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 295

Query: 121 LINRFFESGRSMEAFKLIDELDEHG----------------------------------- 145
           LI+   ++G    A  L+ ++ E G                                   
Sbjct: 296 LIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR 355

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           IKP+ V +N +I  YC  G++D+A +++  ME  G  PD VTY+T+I A CK  +   AF
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 415

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +   M  KG+  + IT ++++  LC EK+L +A++L  +  K G   DE +Y +LI G+
Sbjct: 416 ELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 475

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++    RAL L D+M +  ++P   TY+ +I GLS+S +  +A  +L +L     IP  
Sbjct: 476 CKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPAN 535

Query: 326 TTFNTIIH---------------GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           T ++ ++H               GFC +G + +A + +  M+++++  D    ++L+ G 
Sbjct: 536 TKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGH 595

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           CR G + KAL F +  + +G A +S +  +LI  L
Sbjct: 596 CRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 225/423 (53%), Gaps = 18/423 (4%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
           +P V+ YN ++    ++  +  A +  D +   G+ PN  T+NI+I+  C  G   +A  
Sbjct: 113 VPSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           I+R+M   G  P+ VTYNTL+ A  +AG ++ A R++ +M   GLK N +T N++++ +C
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              K+++A  + +   + G   D VSY TL+ GY +   ++ AL ++ EM ++ IMP   
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T+ ++I  + ++G  E A+ ++ ++ + G+  +E TF  +I GFC +G ++ AL     M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            +   KP +V  N L++G C  G +++A +       KG   D VTY+T+IS+ CK    
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
             AF L  +M EK + PD  TY+++   L E  RL +A      M++ G           
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG----------- 460

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 + P   +Y+  I+ HC +G  + AL + ++  + G+  +  TY  L+NGL K  
Sbjct: 461 ------LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 514

Query: 532 KSI 534
           +++
Sbjct: 515 RAM 517



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNIL------------- 51
           G LPD VTY+ +++ L K  +  E + LL  +  +  +P  T Y+ L             
Sbjct: 495 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVL 554

Query: 52  --VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
             + G+C  G + EA +V   M       D   Y++LI+G C AG + +A    K+M   
Sbjct: 555 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQR 614

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
              P+  +  +LI   FE+G  +EA ++I +L       +A     +I     EG +D  
Sbjct: 615 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAV 674

Query: 170 CKIVRNMEENGFSP 183
             ++  M ++G  P
Sbjct: 675 LDVLHGMAKDGLLP 688


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 265/509 (52%), Gaps = 20/509 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VTY  +L+A+ K     E  ++L +M+ +G  PN  TYN++++G C+ G + +A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ ++     PD+ +Y  ++ G C A   ++   L  EM   K +P+ VT++ L+  
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G    A +++ ++ +HG  PN    NI+I   CK+G++D A   + NM   G +PD
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++Y T++   C+AG  E A  ++  M RK    N +T NT +  LC +  +++A  L+ 
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G  +  V+Y  L+ G+    + + AL+L++ +      P+T TY  ++ GL  + 
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAE 478

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A ++L E++Q     +  TFN ++  FC +G VE+A++  N+M+E    P+++T N
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 538

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL G+ ++   E+AL+     + KG ++D++TY++++  L +E R E+A  +L  +++ 
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P    Y  I  AL +    ++A  F + MV  G        PN S           +
Sbjct: 599 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG------CMPNES-----------T 641

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGI 513
           Y   I     +G  K+A  +  E   KG+
Sbjct: 642 YIILIEGLAHEGLLKEARYVLSELYAKGV 670



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 240/468 (51%), Gaps = 3/468 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN I++ + ++G++++ +++L+ +   G  P+  +Y  ++ G C    
Sbjct: 213 MRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARR 272

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   +   M   K +P+  T++ML+  +C  GM+E A ++ ++M      P+    N 
Sbjct: 273 WDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNI 332

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR  +A+  ++ +  +G  P+ +++  +++  C+ G+ + A +++  M    
Sbjct: 333 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 392

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT I   C+ G +E+A +++++M   G  +  +T N ++H  C + ++D A 
Sbjct: 393 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 452

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N+        + ++Y TL+TG    E+ + A +L  EM ++    +  T+N ++   
Sbjct: 453 ELFNNLPCEP---NTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFF 509

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  E+A++++N++++ G  P+  TFNT++ G   +   E+AL+  + +V K    D 
Sbjct: 510 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 569

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T + ++  L RE   E+A++   +    G       YN ++ +LCK    + A    + 
Sbjct: 570 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 629

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G L+EA+   S +   G ++  +++
Sbjct: 630 MVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLE 677



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 230/469 (49%), Gaps = 21/469 (4%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M Q    P V TY +L+   C +    EA  +  EM +    P++VTYN +IN     GR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A ++++ L  +G +P+ V++  ++K  C   + D    +   M +    P+ VT++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+   C+ G +E A +++  M + G   NT   N +++ +C + ++D+AY  LN+    G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D +SY T++ G  R  +   A +L  EM  +   P+  T+N  I  L Q G  EQAI
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            ++  + + G      T+N ++HGFC +G+V+ AL+  N +     +P+ +T   LL+GL
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGL 474

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C    L+ A +     I K   +++VT+N L+S  C++  +E+A  L+++M E    P+ 
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T+  +   + +    EEA +    +V  G                 +   +I+YS  ++
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKG-----------------VSLDTITYSSVVD 577

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
               + R ++A+Q+    +  G+      Y  ++  L KR ++  +A+D
Sbjct: 578 VLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCET-DQAID 625



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 17/231 (7%)

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G S + +        + +LQ G  P   T+  ++   C      +A+   ++M  K   P
Sbjct: 161 GASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP 220

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +IVT N++++G+CREG ++ A +        G   D V+Y T++  LC  RR +D   L 
Sbjct: 221 NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF 280

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +EM +KK  P+  T+  +       G +E A +    M + G        PNT+      
Sbjct: 281 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG------CTPNTTLC---- 330

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  +  IN  C QGR  DA          G   +  +Y  ++ GL +
Sbjct: 331 -------NIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 374


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 265/544 (48%), Gaps = 35/544 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TY  ++D L K+ K++E R +LS+M ++GL+P+  TYN L+ GYCK G + +A
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++DLM  N   P+  TYN LI G C    + +A  L  +M   KL P ++TYN+LI+ 
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +      A++L+  ++E+G+ P+  T+++ I   CKEG++++A  +  +++  G   +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y  LID  CK G ++ A+ +++ M       N+ T N ++  LC EKK+ EA  L+ 
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G     V+Y  LI    +D   + ALK+++ M      P   TY A +      G
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+  D++ ++ + G++PD  T+  +I G+   G   +A  F   MV+   KP +   +
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688

Query: 365 ILLSGLCRE----------GI--------LEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
           IL+  L  E          GI         E ALK F   +  G  +D   Y  LI+  C
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFC 748

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           ++ RLE+A GL+  M+E+ + P    Y ++     + G   EA +    MVE G +    
Sbjct: 749 QQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL---- 804

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                        P   SY   +     +G  + A  +F      G   ++  +  L++G
Sbjct: 805 -------------PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851

Query: 527 LIKR 530
           L+KR
Sbjct: 852 LLKR 855



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 258/522 (49%), Gaps = 1/522 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  + V+Y  ++  L + G++NE   L +DM +    P   TY +L+      G   EA
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M +    P+V TY +LI+G C    ++EA ++  EM    L+P VVTYN LI+ 
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G   +AF+++D ++ +   PN  T+N +I   CK+ K+ KA  ++  M E   SP 
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+LI   CK  ++E A+R++ +M   GL  +  T +  + TLC E +++EA  L +
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S   +G   +EV Y  LI GY +  K + A  L + M     +P+++TYN +I GL +  
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A  ++ ++L  G+ P   T+  +I     +G  + AL+  N MV   ++PD+ T  
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L     +G+LE+          +G   D VTY  LI    +      AF  L  M + 
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P  Y  + +   L    R++E +    I   +  + +++      K  E      +S
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVS 738

Query: 485 -YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            Y   I   C Q R ++A  +    +++G++ ++  Y +L++
Sbjct: 739 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 158/561 (28%), Positives = 259/561 (46%), Gaps = 36/561 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+N +++   K G + E     S + + GL P+  TY  L+ G+C+   +  A  V
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             +M Q     +  +Y  LI+G C AG + EA +L  +M      P V TY  LI     
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR +EA  L +E+ E G +PN  T+ ++I   CKE K+D+A K++  M E G  P  VT
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT--------------------------- 220
           YN LID  CK G +++AF ++D+M       NT                           
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 221 --------ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
                   IT N+++H  C    L+ AY LL+  ++ G   D+ +Y   I    ++ +  
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  L+D +K + +  +   Y A+I G  + GK + A  +L  +L    +P+  T+N +I
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G C E ++++A     KM+    KP +VT  IL+  + ++G  + ALK F   +  G  
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D  TY   + +   +  LE+   ++++M E+ + PD  TY  +       G    A  F
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 453 TSIMVETG-KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
              MV+TG K +  +V         E           I+   +   Y+ AL++FE+  + 
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731

Query: 512 GIAINKSTYMNLMNGLIKRRK 532
           G  I+ S Y  L+ G  ++ +
Sbjct: 732 GCTIDVSIYGALIAGFCQQER 752



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 232/484 (47%), Gaps = 17/484 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P    YN ++    K   + E   V   +  N+  P+++T+N ++NG+C  G + EA   
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++    L PD  TY +LI     +     A+++   + + G + N V++  +I   C+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G+I++A K+  +M E+   P   TY  LI A   +G   EA  + + M  KG + N  T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
              ++  LC E K+DEA  +L+  S++G     V+Y  LI GY ++   + A ++ D M+
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
                P+T TYN +I GL +  K  +A+ +LN++L+  + P   T+N++IHG C    +E
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A +  + M E    PD  T ++ +  LC+EG +E+A   F S   KG   + V Y  LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              CK  +++ A+ LL  M      P+ YTY  +   L +  +++EA    + M+  G  
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG-- 574

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          + P+ ++Y+  I E    G +  AL++F      G   +  TY  
Sbjct: 575 ---------------VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 523 LMNG 526
            ++ 
Sbjct: 620 FLHA 623



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 211/432 (48%), Gaps = 17/432 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  TY+  +D L K+G++ E   L   +K +G+  N   Y  L+ GYCK+G +  A
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVA 528

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M  +  LP+ +TYN+LI G C    ++EA  L  +M ++ + P VVTY  LI  
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A K+ + +   G +P+  T+   +  Y  +G +++   ++  M E G  PD
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  LID   + G    AF  +  M   G K +   ++ ++  L  E ++ E      
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE------ 702

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S+ G  +D VS  TL        +   ALKL+++M E         Y A+I G  Q  
Sbjct: 703 TRSEIG--IDSVS-NTL--------EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 751

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A  +++ + + GM P E  +N+++   C  G   +A++  + MVE    P + +  
Sbjct: 752 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 811

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+ GL  EG  EKA   F   +  G   D V +  LI  L K   +++   L+  MEEK
Sbjct: 812 LLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 871

Query: 425 KLGPDRYTYAAI 436
              P+  TY+ +
Sbjct: 872 GCQPNPLTYSLL 883



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 224/455 (49%), Gaps = 31/455 (6%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           +V +Y+ ++N    A +L  A ++R  M +S   + DV+               +E F+ 
Sbjct: 100 NVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFV-------------LEVFRK 146

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           ++   E   KP    +N ++    K   ID+   +   +  N  SP+  T+N +++  CK
Sbjct: 147 MNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            GN+ EA      + + GL  +T T  +++   C  K +D AY +     ++G   +EVS
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI G     + N ALKL+ +M E    P+  TY  +I+ LS SG+  +A+++ NE+ 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G  P+  T+  +I G C E ++++A +  ++M EK   P +VT N L+ G C+EG+++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A +            ++ TYN LI  LCK+R++  A  LL++M E+KL P   TY ++ 
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
               +   LE A +  S+M E G +                 P   +YS  I+  C +GR
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLV-----------------PDQWTYSVFIDTLCKEGR 489

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            ++A  +F+  + KG+  N+  Y  L++G  K  K
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 159/352 (45%), Gaps = 53/352 (15%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            CLP++ TYN +++ L K+ K+ E   L++ M   G+ P   TY IL+    K G    A
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V + M      PDV TY   ++ + + GMLEE   +  +M    +LPD+VTY  LI+ 
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658

Query: 125 FFESGRSMEAF------------------------------------------------- 135
           +   G +  AF                                                 
Sbjct: 659 YARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEY 718

Query: 136 ----KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
               KL +++ EHG   +   +  +I  +C++ ++++A  +V +M+E G SP    YN+L
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 778

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D  CK G   EA R++D M   GL     +   ++  L  E   ++A  + +     GY
Sbjct: 779 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 838

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             DEV++  LI G  + +  +   +L D M+E+   P+  TY+ +I GL ++
Sbjct: 839 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 247/461 (53%), Gaps = 3/461 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +    ++    K G+      ++  +++ G V + T+YN+L+SGYCK G ++EA+RV
Sbjct: 112 PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV 171

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M  +   P+  TY+ ++   C+ G L++A ++       K  PDVVT   LI+   +
Sbjct: 172 LDRMGVS---PNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                +A KL +E+   G KP+ VT+N++IK +CK G++D+A + ++ +   G  PD ++
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N ++ + C  G   +A +++  M RKG   + +T N +++ LC +  L +A  +L    
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP 348

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G+  +  S+  LI G+   +  +RA++  + M  R   P   TYN ++  L + GK +
Sbjct: 349 KHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVD 408

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ +L++L   G  P   ++NT+I G    G+ E A++   +M  K  KPD++TC  ++
Sbjct: 409 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 468

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL REG + +A+KFF          ++  YN++I+ LCK ++   A   L++M  K   
Sbjct: 469 GGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCK 528

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           P   TY  +   +   G  E+A K ++ +   G +   +V+
Sbjct: 529 PTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVE 569



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 231/447 (51%), Gaps = 12/447 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G + D  +YN ++    K G++ E   +L  M   G+ PN  TY+ ++   C  G 
Sbjct: 140 LEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGK 196

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+AM+V+    Q+K  PDV T  +LI+  C    + +A +L  EM +    PDVVTYN 
Sbjct: 197 LKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNV 256

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + GR  EA + + +L  +G +P+ ++HN++++  C  G+   A K++  M   G
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VT+N LI+  C+ G + +A  ++++M + G   N+ + N ++   C  K +D A 
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAI 376

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG Y D V+Y  L+T   +D K + A+ +  ++  +   PS  +YN +I GL
Sbjct: 377 EYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 436

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK E A+++L E+   G+ PD  T  +++ G   EG+V +A++F + +   + +P+ 
Sbjct: 437 LKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNA 496

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N +++GLC+      A+ F    + KG      TY TLI  +  E   EDA      
Sbjct: 497 FIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDA------ 550

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLE 447
               KL  + Y+   +  +LVE   LE
Sbjct: 551 ---SKLSNELYSRGLVKRSLVEKVSLE 574



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 228/469 (48%), Gaps = 20/469 (4%)

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L+E  R ++ MT     PDV     LI  +C  G  + A ++   +E    + DV +Y
Sbjct: 93  GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI+ + +SG   EA +++D +   G+ PNA T++ ++   C  GK+ +A +++    +
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +   PD VT   LIDA CK   + +A ++ + M  KG K + +T N ++   C   +LDE
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   L      G   D +S+  ++       +   A+KL   M  +  +PS  T+N +I 
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L Q G   +A+++L  + + G  P+  +FN +I GFC+   +++A+++   MV +   P
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DIVT NILL+ LC++G ++ A+        KG +   ++YNT+I  L K  + E A  LL
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM  K L PD  T  ++   L   G++ EA KF   +                     I
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA-----------------I 492

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            P++  Y+  I   C   +   A+    +   KG    ++TY  L+ G+
Sbjct: 493 RPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGI 541



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 201/411 (48%), Gaps = 20/411 (4%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           + R   +G   E  + ++ +   G  P+ +    +I+ +CK G+   A +I+  +EE+G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D  +YN LI   CK+G +EEA R++D   R G+  N  T + +L +LC   KL +A  
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L    +   Y D V+   LI    ++    +A+KL++EM+ +   P   TYN +I G  
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+ ++AI  L +L   G  PD  + N I+   CS G+   A++    M+ K   P +V
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T NIL++ LC++G+L KAL         G   +S ++N LI   C  + ++ A   L  M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             +   PD  TY  + TAL + G++++A    S +   G                   PS
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG-----------------CSPS 425

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            ISY+  I+     G+ + A+++ EE   KG+  +  T  +++ GL +  K
Sbjct: 426 LISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 166/355 (46%), Gaps = 21/355 (5%)

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           + G +EE  R ++ M  KG   + I    ++   C   +   A  ++    + G  +D  
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           SY  LI+GY +  +   AL++ D M    + P+  TY+A++  L   GK +QA+ +L   
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           LQS   PD  T   +I   C E  V +A++  N+M  K  KPD+VT N+L+ G C+ G L
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           ++A++F +     G   D +++N ++ SLC   R  DA  LL+ M  K   P   T+  +
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327

Query: 437 HTALVESGRLEEAQKFTSIMVETGKI-NHQVVQP------NTSKTPEEID---------- 479
              L + G L +A     +M + G   N +   P      N       I+          
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387

Query: 480 -PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            P  ++Y+  +   C  G+  DA+ I  +   KG + +  +Y  +++GL+K  K+
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 156/528 (29%), Positives = 264/528 (50%), Gaps = 15/528 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +T+NT+++ L KKG++ E + ++S + +    PN  TY  L+ G+C+   L  A
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M ++   P+  TY+ LING C+ G LEEA  + +EM    + P V TY   +  
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G S EA +L+ ++ + G  PN  T   +I    ++GK + A  +   M  +G  P 
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  C  G  E AF +   M   G   +T T N I+   C    + +A ++ +
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   + ++Y TLI GY +    N A++L + MK   + P  +TY  +I G S+ G
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  +   +++ G+ P+  T+  II G+ +  +V+ AL    KMVE    P   T N
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++SG  +   + +A  F    + +G   + +TY + I  LC+  R   AF +  EME++
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+ YTY+++   L + GR E+A+ +  +     ++ H   +PN             +
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLL----ARLTHYGCEPNVD-----------T 661

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  +   C +GR  +A Q+    ++KG+  ++  Y  L+ G  K  K
Sbjct: 662 YTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLK 709



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 248/524 (47%), Gaps = 19/524 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY +++    +   L+    +   M K G  PN  TY+ L++G C  G L+EAM +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M Q    P V+TY + +   C+AG   EA  L  +M+    +P++ T+  LI+    
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+   A  L  ++   G+ P  VT+N +I   C EG+ + A  I + M  +G  P   T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   C  G++++A  + D M + G   N IT NT+++  C +  L+ A  LL    
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D  +Y  LI+G+ R  K   A  L+  M E  I P+  TY A+I G     K +
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ +  ++++SG +P   T+N +I GF     + +A  F  KMV++   P+++T    +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA--FGLLSEMEEKK 425
            GLCR G    A K F     +    +  TY++LI  LC+E R EDA  + LL+ +    
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYG 654

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  TY  +   L   GR  EA +    M + G      +QP+     EEI      Y
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG------LQPS-----EEI------Y 697

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +   C   + + AL IF      G  ++ S Y  L+  L K
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCK 741



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 223/458 (48%), Gaps = 2/458 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC+P+  T+  ++  L + GK      L   M   GLVP   TYN L++  C  G 
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A  +   M  + SLP   TYN +I  +C  G +++A  +  +M      P+V+TYNT
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + + G    A +L++ +  +G+KP+A T+  +I  + + GK++ A  +   M E+G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ VTY  +ID       +++A  +   M   G   ++ T N ++        + EA 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  K+G   + ++Y + I G  R+ +   A K++ EM++R   P+ +TY+++I+GL
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632

Query: 301 SQSGKTEQA--IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            Q G+ E A   ++L  L   G  P+  T+ T++ G C EG+  +A Q    M +K  +P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                  LL G C+   +E AL  F S    G  +    Y  LI +LCKE  +E+A  + 
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
             M EK    D   +  +   L++ G  +   K   +M
Sbjct: 753 QTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVM 790



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 231/459 (50%), Gaps = 22/459 (4%)

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
           M++ A  +  +M +  + P ++T+NT+IN   + GR  EA  ++  +  +   PNA T+ 
Sbjct: 182 MVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYT 241

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            +I  +C+   +D A  +   M ++G  P+ VTY+TLI+  C  G +EEA  M++ M +K
Sbjct: 242 SLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G++    T    L +LC      EA  LL    KRG   +  ++  LI+G  RD K   A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M    ++P+T TYNA+I  L   G+ E A  +   +L  G +P   T+N II  
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV- 393
           FC  G ++KA+   +KM++    P+++T N L+ G C++G L  A++     I+KG  + 
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE--IMKGNGLK 479

Query: 394 -DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D+ TY  LIS   +  +LE A  L   M E  + P+  TY AI        ++++A   
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 453 TSIMVETGKI----NHQVVQPNTSKT--------------PEEIDPSSISYSEKINEHCS 494
              MVE+G +     + V+    SKT               + + P+ I+Y+  I+  C 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            GR   A +IF E  ++    N  TY +L+ GL +  ++
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 206/434 (47%), Gaps = 2/434 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  VTYN +++ L  +G+      +   M   G +P+  TYN ++  +C +G +++A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M + D M +  S P+V TYN LI G+C  G L  A RL + M+   L PD  TY  LI+ 
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G+   A  L   + EHGI PN VT+  +I  Y    K+D A  +   M E+G  P 
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN +I    K  ++ EA      M ++GL  N IT  + +  LC   +   A+ + +
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFH 611

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRA--LKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              KR Y+ +  +Y +LI G  ++ +A  A    L   +      P+  TY  ++ GL  
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+  +A  ++  + + G+ P E  +  ++ G C   +VE AL     M    F+  +  
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+  LC+E  +E+A   F++ + K    D V +  L+  L KE   +    LL  ME
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVME 791

Query: 423 EKKLGPDRYTYAAI 436
            +    +  TY  +
Sbjct: 792 SRNCTLNFQTYVML 805


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 156/528 (29%), Positives = 264/528 (50%), Gaps = 15/528 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +T+NT+++ L KKG++ E + ++S + +    PN  TY  L+ G+C+   L  A
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M ++   P+  TY+ LING C+ G LEEA  + +EM    + P V TY   +  
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G S EA +L+ ++ + G  PN  T   +I    ++GK + A  +   M  +G  P 
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  C  G  E AF +   M   G   +T T N I+   C    + +A ++ +
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   + ++Y TLI GY +    N A++L + MK   + P  +TY  +I G S+ G
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  +   +++ G+ P+  T+  II G+ +  +V+ AL    KMVE    P   T N
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++SG  +   + +A  F    + +G   + +TY + I  LC+  R   AF +  EME++
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+ YTY+++   L + GR E+A+ +  +     ++ H   +PN             +
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLL----ARLTHYGCEPNVD-----------T 661

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  +   C +GR  +A Q+    ++KG+  ++  Y  L+ G  K  K
Sbjct: 662 YTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLK 709



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 248/524 (47%), Gaps = 19/524 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY +++    +   L+    +   M K G  PN  TY+ L++G C  G L+EAM +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M Q    P V+TY + +   C+AG   EA  L  +M+    +P++ T+  LI+    
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+   A  L  ++   G+ P  VT+N +I   C EG+ + A  I + M  +G  P   T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   C  G++++A  + D M + G   N IT NT+++  C +  L+ A  LL    
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D  +Y  LI+G+ R  K   A  L+  M E  I P+  TY A+I G     K +
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ +  ++++SG +P   T+N +I GF     + +A  F  KMV++   P+++T    +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA--FGLLSEMEEKK 425
            GLCR G    A K F     +    +  TY++LI  LC+E R EDA  + LL+ +    
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYG 654

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  TY  +   L   GR  EA +    M + G      +QP+     EEI      Y
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG------LQPS-----EEI------Y 697

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +   C   + + AL IF      G  ++ S Y  L+  L K
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCK 741



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 223/458 (48%), Gaps = 2/458 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC+P+  T+  ++  L + GK      L   M   GLVP   TYN L++  C  G 
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A  +   M  + SLP   TYN +I  +C  G +++A  +  +M      P+V+TYNT
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + + G    A +L++ +  +G+KP+A T+  +I  + + GK++ A  +   M E+G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ VTY  +ID       +++A  +   M   G   ++ T N ++        + EA 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  K+G   + ++Y + I G  R+ +   A K++ EM++R   P+ +TY+++I+GL
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632

Query: 301 SQSGKTEQA--IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            Q G+ E A   ++L  L   G  P+  T+ T++ G C EG+  +A Q    M +K  +P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                  LL G C+   +E AL  F S    G  +    Y  LI +LCKE  +E+A  + 
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
             M EK    D   +  +   L++ G  +   K   +M
Sbjct: 753 QTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVM 790



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 231/459 (50%), Gaps = 22/459 (4%)

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
           M++ A  +  +M +  + P ++T+NT+IN   + GR  EA  ++  +  +   PNA T+ 
Sbjct: 182 MVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYT 241

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            +I  +C+   +D A  +   M ++G  P+ VTY+TLI+  C  G +EEA  M++ M +K
Sbjct: 242 SLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G++    T    L +LC      EA  LL    KRG   +  ++  LI+G  RD K   A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L+ +M    ++P+T TYNA+I  L   G+ E A  +   +L  G +P   T+N II  
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV- 393
           FC  G ++KA+   +KM++    P+++T N L+ G C++G L  A++     I+KG  + 
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE--IMKGNGLK 479

Query: 394 -DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D+ TY  LIS   +  +LE A  L   M E  + P+  TY AI        ++++A   
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 453 TSIMVETGKI----NHQVVQPNTSKT--------------PEEIDPSSISYSEKINEHCS 494
              MVE+G +     + V+    SKT               + + P+ I+Y+  I+  C 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            GR   A +IF E  ++    N  TY +L+ GL +  ++
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 206/434 (47%), Gaps = 2/434 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  VTYN +++ L  +G+      +   M   G +P+  TYN ++  +C +G +++A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M + D M +  S P+V TYN LI G+C  G L  A RL + M+   L PD  TY  LI+ 
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G+   A  L   + EHGI PN VT+  +I  Y    K+D A  +   M E+G  P 
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN +I    K  ++ EA      M ++GL  N IT  + +  LC   +   A+ + +
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFH 611

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRA--LKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              KR Y+ +  +Y +LI G  ++ +A  A    L   +      P+  TY  ++ GL  
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+  +A  ++  + + G+ P E  +  ++ G C   +VE AL     M    F+  +  
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+  LC+E  +E+A   F++ + K    D V +  L+  L KE   +    LL  ME
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVME 791

Query: 423 EKKLGPDRYTYAAI 436
            +    +  TY  +
Sbjct: 792 SRNCTLNFQTYVML 805


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 262/507 (51%), Gaps = 18/507 (3%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           FK+       D+   +  +G+ P++TT NIL++   +    ++      ++ +  S PDV
Sbjct: 194 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVS-PDV 252

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           + +   IN +C  G +EEA  L  +ME   ++P+VVTYNT+I+    SGR  EAF   ++
Sbjct: 253 YLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEK 312

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E G++P  +T++I++K   K  +I  A  +++ M E GF P+ + YN LID+  +AG+
Sbjct: 313 MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + +A  + D+M  KGL + + T NT++   C   + D A  LL      G+ +++ S+ +
Sbjct: 373 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I         + AL+   EM  R + P       +I GL + GK  +A+++  + L  G
Sbjct: 433 VICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG 492

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            + D  T N ++HG C  G++E+  +   +++ + F  D V+ N L+SG C    L++A 
Sbjct: 493 FLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAF 552

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
            F    + KG   D+ TY+ LI  L    ++E+A     + +   + PD YTY+ +    
Sbjct: 553 MFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGC 612

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++ R EE QK    M+         +QPNT           + Y+  I  +C  GR   
Sbjct: 613 CKAERTEEGQKLFDEMMSNN------LQPNT-----------VVYNHLIGAYCRSGRLSM 655

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           AL++ E+ + KGI+ N +TY +L+ G+
Sbjct: 656 ALELREDMKHKGISPNSATYTSLIKGM 682



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 166/531 (31%), Positives = 261/531 (49%), Gaps = 19/531 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P+ VTYNT++D L   G+ +E       M ++G+ P   TY+ILV G  K   
Sbjct: 278 MEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKR 337

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  V+  MT+    P+V  YN LI+    AG L +A  ++  M S  L     TYNT
Sbjct: 338 IGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 397

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + +SG++  A +L+ E+   G   N  +   +I   C     D A + V  M    
Sbjct: 398 LIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRN 457

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP      TLI   CK G   +A  +      KG  ++T T N +LH LC   KL+E +
Sbjct: 458 MSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGF 517

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      RG+ +D VSY TLI+G   ++K + A    DEM ++ + P  +TY+ +I GL
Sbjct: 518 RIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGL 577

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K E+AI    +  ++GMIPD  T++ +I G C   + E+  +  ++M+  + +P+ 
Sbjct: 578 LNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNT 637

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N L+   CR G L  AL+       KG + +S TY +LI  +    R+E+A  LL E
Sbjct: 638 VVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEE 697

Query: 421 MEEKKLGPDRYTYAAIHTALVES-GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           M  + L P+ + Y    TAL++  G+L +  K   ++ E    N              + 
Sbjct: 698 MRMEGLEPNVFHY----TALIDGYGKLGQMVKVECLLREMHSKN--------------VH 739

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           P+ I+Y+  I  +   G   +A ++  E R+KGI  +  TY   + G +K+
Sbjct: 740 PNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQ 790



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 212/447 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN ++D+L + G LN+  ++   M  +GL    +TYN L+ GYCK G    A
Sbjct: 352 GFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIA 411

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++  M       +  ++  +I   C+  M + A R   EM    + P      TLI+ 
Sbjct: 412 ERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISG 471

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +A +L  +    G   +  T N ++   C+ GK+++  +I + +   GF  D
Sbjct: 472 LCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMD 531

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTLI   C    ++EAF  MD M +KGLK +  T + ++  L    K++EA     
Sbjct: 532 RVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWG 591

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D  +Y  +I G  + E+     KL+DEM    + P+T  YN +I    +SG
Sbjct: 592 DCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A+++  ++   G+ P+  T+ ++I G     +VE+A     +M  +  +P++    
Sbjct: 652 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  + G + K     R    K    + +TY  +I    ++  + +A  LL EM EK
Sbjct: 712 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREK 771

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQK 451
            + PD  TY       ++ G + +A K
Sbjct: 772 GIVPDSITYKEFIYGYLKQGGVLQAFK 798



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 214/426 (50%), Gaps = 24/426 (5%)

Query: 111 LLPDVVTYNTLIN---RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           + P   T N L+    R  E  +  EAF ++ +    G+ P+       I  +CK GK++
Sbjct: 214 MFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK----GVSPDVYLFTTAINAFCKGGKVE 269

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A ++   MEE G  P+ VTYNT+ID    +G  +EAF   + M  +G++   IT + ++
Sbjct: 270 EAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILV 329

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L   K++ +AY +L   +++G+  + + Y  LI         N+A+++ D M  + + 
Sbjct: 330 KGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLS 389

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            ++ TYN +I G  +SG+ + A  +L E+L  G   ++ +F ++I   CS    + AL+F
Sbjct: 390 LTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRF 449

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M+ ++  P       L+SGLC+ G   KA++ +  ++ KG  VD+ T N L+  LC+
Sbjct: 450 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCE 509

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +LE+ F +  E+  +    DR +Y  + +    + +L+EA  F   MV+ G       
Sbjct: 510 AGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG------- 562

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     + P + +YS  I    +  + ++A+Q + + ++ G+  +  TY  +++G 
Sbjct: 563 ----------LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGC 612

Query: 528 IKRRKS 533
            K  ++
Sbjct: 613 CKAERT 618



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 196/425 (46%), Gaps = 45/425 (10%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++ +++  L      +     + +M  + + P       L+SG CK G   +A+ +    
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF 488

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                L D  T N L++G C AG LEE FR++KE+     + D V+YNTLI+    + + 
Sbjct: 489 LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKL 548

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EAF  +DE+ + G+KP+  T++I+I+      K+++A +   + + NG  PD  TY+ +
Sbjct: 549 DEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVM 608

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CKA   EE  ++ D M    L+ NT+                              
Sbjct: 609 IDGCCKAERTEEGQKLFDEMMSNNLQPNTVV----------------------------- 639

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
                 Y  LI  Y R  + + AL+L ++MK + I P++ TY ++I G+S   + E+A  
Sbjct: 640 ------YNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 693

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L E+   G+ P+   +  +I G+   GQ+ K      +M  K+  P+ +T  +++ G  
Sbjct: 694 LLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 753

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R+G + +A +       KG   DS+TY   I    K+  +  AF           G D  
Sbjct: 754 RDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK----------GSDEE 803

Query: 432 TYAAI 436
            YAAI
Sbjct: 804 NYAAI 808



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 142/278 (51%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G + D V+YNT++       KL+E    + +M K+GL P+  TY+IL+ G   +  ++
Sbjct: 525 GRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVE 584

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA++      +N  +PDV+TY+++I+G C A   EE  +L  EM S  L P+ V YN LI
Sbjct: 585 EAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLI 644

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             +  SGR   A +L +++   GI PN+ T+  +IK      ++++A  ++  M   G  
Sbjct: 645 GAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLE 704

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+   Y  LID   K G M +   ++  M  K +  N IT   ++     +  + EA  L
Sbjct: 705 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 764

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           L+   ++G   D ++Y   I GY +     +A K  DE
Sbjct: 765 LHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 74/140 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P++ TY +++  +    ++ E + LL +M+ +GL PN   Y  L+ GY KLG 
Sbjct: 663 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQ 722

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +   ++  M      P+  TY ++I G+   G + EA RL  EM    ++PD +TY  
Sbjct: 723 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKE 782

Query: 121 LINRFFESGRSMEAFKLIDE 140
            I  + + G  ++AFK  DE
Sbjct: 783 FIYGYLKQGGVLQAFKGSDE 802



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 24/157 (15%)

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE---DAFGLLSEMEEKKLGPDRYTYAA 435
           AL  F     KG      T N L++SL +    +   +AF ++     K + PD Y +  
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVC----KGVSPDVYLFTT 257

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
              A  + G++EEA +  S M E G +                 P+ ++Y+  I+     
Sbjct: 258 AINAFCKGGKVEEAIELFSKMEEAGVV-----------------PNVVTYNTVIDGLGMS 300

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           GRY +A    E+  ++G+     TY  L+ GL K ++
Sbjct: 301 GRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKR 337


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 260/530 (49%), Gaps = 6/530 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    +N IL +L        V  L    +  G  P+  T NIL++ +C L  +  A  V
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    P+  T N LI G C  G +++A     ++ +     + V+Y TLIN   +
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G +    +L+ +L+ H +KP+ V +N +I   CK   +  AC +   M   G SP+ VT
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+   C  G+++EAF +++ M  K +  +  T NT++  L  E K+  A ++L    
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K     D V+Y +LI GYF   K   A  ++  M +  + P+  TY  MI GL +    +
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+    MIPD  T+ ++I G C    +E+A+    KM E+  +PD+ +  ILL
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+ G LE A +FF+  ++KG  ++  TYN +I+ LCK     +A  L S+ME K   
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------TPEEIDPS 481
           PD  T+  I  AL E    ++A+K    M+  G    + V+   +K      T   I P 
Sbjct: 481 PDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPD 540

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            ++Y   ++ +      K A  +F    Q G+  N   Y  +++GL K++
Sbjct: 541 VVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 263/544 (48%), Gaps = 42/544 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG    PD V YNTI+ +L K   L +  DL S+M  +G+ PN  TYN LV G+C +G 
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGH 253

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA  +++ M      PDV T+N LI+     G ++ A  +   M    + PDVVTYN+
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNS 313

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +F   +   A  +   + + G+ PN  T+  MI   CKE  +D+A  +   M+   
Sbjct: 314 LIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKN 373

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY +LID  CK  ++E A  +   M  +G++ +  +   +L  LC   +L+ A 
Sbjct: 374 MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAK 433

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                   +GY+L+  +Y  +I G  + +    A+ L  +M+ +  MP   T+  +I  L
Sbjct: 434 EFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493

Query: 301 SQSGKTEQAIDMLNELLQSGMI-----------------------PDETTFNTIIHGFCS 337
            +  + ++A  +L E++  G+                        PD  T+ T++ G+  
Sbjct: 494 FEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFL 553

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
             +++ A      M +    P++    I++ GLC++  +++A+  F     K    + VT
Sbjct: 554 VNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVT 613

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIM 456
           Y +LI +LCK   LE A  LL EM+E  + PD Y+Y  +   L +SGRLE A++ F  ++
Sbjct: 614 YTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLL 673

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           V+   +N QV                  Y+  INE C  G + +AL +  +   KG   +
Sbjct: 674 VKGYHLNVQV------------------YTAMINELCKAGLFDEALDLQXKMEDKGCMPD 715

Query: 517 KSTY 520
             T+
Sbjct: 716 AVTF 719



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 242/476 (50%), Gaps = 23/476 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+NT++DAL K+GK+   + +L+ M K  + P+  TYN L+ GY  L  +K A  V
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYV 330

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M Q+   P+V TY  +I+G C   M++EA  L +EM+   ++PD+VTY +LI+   +
Sbjct: 331 FYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK 390

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +     A  L  ++ E GI+P+  ++ I++   CK G+++ A +  + +   G+  +  T
Sbjct: 391 NHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQT 450

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------CEK------ 234
           YN +I+  CKA    EA  +   M  KG   + IT  TI+  L         EK      
Sbjct: 451 YNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMI 510

Query: 235 ----------KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
                     +L EA ++L   +K     D V+YGTL+ GYF   +   A  ++  M + 
Sbjct: 511 ARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQM 570

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            + P+   Y  MI GL +    ++A+ +  E+    M P+  T+ ++I   C    +E+A
Sbjct: 571 GVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERA 630

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           +    +M E   +PD+ +  ILL GLC+ G LE A + F+  ++KG  ++   Y  +I+ 
Sbjct: 631 IALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINE 690

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           LCK    ++A  L  +ME+K   PD  T+  I  AL E    ++A+K    M+  G
Sbjct: 691 LCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 268/551 (48%), Gaps = 40/551 (7%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E  G  PD  T N +++       +     +L+++ K+G  PN  T N L+ G C  G +
Sbjct: 90  ESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEI 149

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           K+A+   D +       +  +Y  LING C  G  +   RL +++E   + PDVV YNT+
Sbjct: 150 KKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI 209

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+   ++    +A  L  E+   GI PN VT+N ++  +C  G + +A  ++  M+    
Sbjct: 210 IHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNI 269

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  T+NTLIDA  K G M+ A  ++ VM +  +K + +T N+++       K+  A  
Sbjct: 270 NPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKY 329

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +  S ++ G   +  +Y T+I G  +++  + A+ L++EMK + ++P   TY ++I GL 
Sbjct: 330 VFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLC 389

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++   E+AI +  ++ + G+ PD  ++  ++   C  G++E A +F  +++ K +  ++ 
Sbjct: 390 KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQ 449

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL---------------- 405
           T N++++GLC+  +  +A+        KG   D++T+ T+I +L                
Sbjct: 450 TYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREM 509

Query: 406 -------CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
                   ++ RL++A  +L+ M +  + PD  TY  +         L+ A+     M +
Sbjct: 510 IARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQ 569

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G      V PN              Y+  I+  C +    +A+ +FEE + K +  N  
Sbjct: 570 MG------VTPNVQ-----------CYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIV 612

Query: 519 TYMNLMNGLIK 529
           TY +L++ L K
Sbjct: 613 TYTSLIDALCK 623



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 223/467 (47%), Gaps = 17/467 (3%)

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+   D M   +  P  + +N +++   N         L K+ ES    PD+ T N L+N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F        AF ++  + + G  PNA+T N +IK  C  G+I KA      +   GF  
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V+Y TLI+  CK G  +   R++  +    +K + +  NTI+H+LC  K L +A  L 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    +G   + V+Y  L+ G+        A  L +EMK + I P   T+N +I  L + 
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK + A  +L  ++++ + PD  T+N++I G+    +V+ A      M +    P++ T 
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             ++ GLC+E ++++A+  F     K    D VTY +LI  LCK   LE A  L  +M+E
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + + PD Y+Y  +  AL + GRLE A++F   ++  G   H  VQ               
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGY--HLNVQ--------------- 449

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +Y+  IN  C    + +A+ +  +   KG   +  T+  ++  L ++
Sbjct: 450 TYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEK 496



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 162/341 (47%), Gaps = 23/341 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  +Y  +LDAL K G+L   ++    +  +G   N  TYN++++G CK     EA
Sbjct: 408 GIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEA 467

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCN---------------AGMLEEAFRLR-KE--- 105
           M +   M     +PD  T+  +I                    A  L+EA ++R KE   
Sbjct: 468 MDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKI 527

Query: 106 ----MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
               M    + PDVVTY TL++ +F       A  +   + + G+ PN   + IMI   C
Sbjct: 528 VLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLC 587

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K+  +D+A  +   M+     P+ VTY +LIDA CK  ++E A  ++  M   G++ +  
Sbjct: 588 KKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVY 647

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           +   +L  LC   +L+ A  +      +GY+L+   Y  +I    +    + AL L  +M
Sbjct: 648 SYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKM 707

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
           +++  MP   T++ +IW L +  + ++A  +L E++  G++
Sbjct: 708 EDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A+  +D M   +  P TF +N ++  L  +      I +  +   +G  PD  T N +++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            FC    +  A      ++++ + P+ +T N L+ GLC  G ++KAL F    + +G  +
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           + V+Y TLI+ LCK    +    LL ++E   + PD   Y  I  +L ++  L +A    
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           S M+  G                 I P+ ++Y+  +   C  G  K+A  +  E + K I
Sbjct: 227 SEMIVKG-----------------ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNI 269

Query: 514 AINKSTYMNLMNGLIKRRK 532
             +  T+  L++ L K  K
Sbjct: 270 NPDVCTFNTLIDALGKEGK 288


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 276/542 (50%), Gaps = 23/542 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT+++   K G L   + L+ ++    L PN  TY  L+  YCK   L++A
Sbjct: 47  GPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDA 106

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + D MT    +PDV TY  ++NG C +G +EEA  + +EME + ++P+  +Y TLI+ 
Sbjct: 107 LYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS 166

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+ G   EAF L   +   GI  + V +  ++    K G  + A  + + + E    P+
Sbjct: 167 LFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPN 226

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           CVTY+ LID +CK G++ +   ++  M  K +  N I  ++I+     +  L+EA  ++ 
Sbjct: 227 CVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMR 286

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +R    +   YGTLI GYF+ ++   AL L+ EMK R +  + F  ++ +  L +SG
Sbjct: 287 KMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSG 346

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A ++  +++  G++PD   + +++ GF   G+   A     +M EKS   D+V  N
Sbjct: 347 RMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYN 406

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++GL + G  E    F       G A DS T+NT+I++ CKE  L +A  LL+EM+  
Sbjct: 407 VLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPE---- 476
            L P+  T   +   L  +G +E+     + M+  G       H+ V   +SK+      
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525

Query: 477 ------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                       ++D S  +Y+  I+  C  G  + A  +F++   KGI  +  TY  L+
Sbjct: 526 LHMHDQLVGMGVKLDLS--TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI 583

Query: 525 NG 526
           +G
Sbjct: 584 HG 585



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 259/529 (48%), Gaps = 19/529 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y  ++D LFK G  N   D+   + ++ LVPN  TY+ L+ G+CKLG + +   ++
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M +    P+V  Y+ +++G+   G+L EA  + ++M    +LP+V  Y TLI+ +F++
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +   A  L  E+   G++ N    +  +    + G++++A ++ ++M   G  PD V Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            +++D   KAG   +AF +   M  K    + +  N +++ L    K  E+        +
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQ 429

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D  ++ T+I  Y ++     ALKL +EMK   + P++ T N ++  L  +G+ E+
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            +D+LN++L  G  P  TT   ++       + +  L  H+++V    K D+ T N L+S
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
             CR G++ +A   F+  + KG   D +TYN LI   C    L+ AF + S+M  + + P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY  +   L  +  ++EA    + M E G +                 P++ +Y   
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLV-----------------PNATTYDIL 652

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           ++ H   G  K+ ++++ E   KG      TY N++     + K +S+A
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTY-NVLISCFAKGKKMSQA 700



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 264/543 (48%), Gaps = 43/543 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ VTY+ ++D   K G +N+   LL +M+++ + PN   Y+ +V GY K G L EAM 
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNA--------------------------------- 93
           V+  M Q   LP+V+ Y  LI+G+  A                                 
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343

Query: 94  --GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +EEA  L K+M S  LLPD V Y ++++ FF++G+  +AF +  E+ E     + V
Sbjct: 344 RSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVV 403

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +N++I    K GK +        M + G +PD  T+NT+I+A CK GN+  A ++++ M
Sbjct: 404 AYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GLK N+IT N ++  LC   ++++   LLN     G++    ++  ++    +  +A
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +  L + D++    +     TYN +I    + G   +A  +  +++  G++ D  T+N +
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IHG+C    ++KA   H++M+ +   P++ T NILL GL    ++++A         +G 
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++ TY+ L+S   K   +++   L  EM  K   P   TY  + +   +  ++ +A++
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKE 702

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDP-SSISYSEKINEHCSQGRYKDALQIFEETRQ 510
               M   G      + PN+S     I     +S   ++N+   +    +A ++FEE  +
Sbjct: 703 LMQEMQVRG------IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 511 KGI 513
           KG 
Sbjct: 757 KGF 759



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 238/464 (51%), Gaps = 15/464 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   +N   ++ ++ L + G++ E  +L  DM  +GL+P+R  Y  ++ G+ K G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE-EAFRLRKEMESLKLLPDVVTYN 119
             +A  +   MT+  S  DV  YN+LING    G  E E+F     M  L L PD  T+N
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH--TGMRQLGLAPDSATFN 440

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN + + G    A KL++E+  +G+KPN++T NI+++  C  G+I+K   ++ +M   
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           GF P   T+  ++DA+ K+   +    M D +   G+K++  T NT++ T C    +  A
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            ++      +G   D ++Y  LI GY       +A  +  +M    + P+  TYN ++ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS +   ++A  ++N++ + G++P+ TT++ ++ G    G +++ ++ + +M+ K F P 
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS---LCKERRLE---- 412
             T N+L+S   +   + +A +  +   ++G   +S TY+ LI     L K+  L     
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740

Query: 413 -----DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
                +A  L  EM EK   P   T A I   L + G+  +AQ+
Sbjct: 741 RSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQR 784



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 174/363 (47%), Gaps = 47/363 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ T+NT+++A  K+G L     LL++MK  GL PN  T NILV   C  G 
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 61  LKEAMRVVDLM---------TQNKSLPD--------------------------VWTYNM 85
           +++ M +++ M         T +K++ D                          + TYN 
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI+ +C  GM+  A  + K+M    +L D++TYN LI+ +  S    +AF +  ++   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+NI++        I +A  +V  M+E G  P+  TY+ L+  + K GNM+E  
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++   M  KG    T T N ++      KK+ +A  L+     RG   +  +Y  LI G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 266 FRDEKA---NRALK---------LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           ++  K    N++LK         L++EM E+  +P   T   + + L++ GK   A  +L
Sbjct: 727 YKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786

Query: 314 NEL 316
           N+L
Sbjct: 787 NKL 789



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 178/396 (44%), Gaps = 48/396 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V YN +++ LFK GK  E     + M++ GL P+  T+N +++ YCK G L  A++++
Sbjct: 401 DVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P+  T N+L+   C AG +E+   L  +M  +   P   T+  +++   +S
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R+     + D+L   G+K +  T+N +I  +C+ G I +A  + ++M   G   D +TY
Sbjct: 520 RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI   C + ++++AF +   M  +G+  N  T N +L  L   + + EA  L+N   +
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   +  +Y  L++G+ +       +KL+ EM  +  +P T TYN +I   ++  K  Q
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699

Query: 309 AIDMLNELL-----------------------------------------------QSGM 321
           A +++ E+                                                + G 
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGF 759

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           IP E T   I       G+   A +  NK+ +K  K
Sbjct: 760 IPCENTLACISFTLAKPGKKADAQRILNKLYKKKVK 795



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 20/265 (7%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +I  S   +N +I G  ++G+  +A+++L  +   G  PD  T+NT+++GFC  G +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +   ++   + +P+++T   L+   C+   LE AL  +    +K    D VTY  +++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LCK  ++E+A  +  EMEE  + P+R++YA +  +L + G + EA      MV  G I  
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG-IGF 190

Query: 465 QVV-------------QPNTSK------TPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
            VV               N ++        E + P+ ++YS  I+ HC  G       + 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 506 EETRQKGIAINKSTYMNLMNGLIKR 530
           +E  +K I  N   Y ++++G  K+
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKK 275


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 242/444 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT N++L+      ++++   L+  M + G  P+  T+N L+ G  +   
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M      PD+ TY +++NG C  G ++ A  L K+ME  K+ P VV YNT
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+         +A  L  E+D  GI+PN VT+N +I+  C  G+   A +++ +M E  
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT++ LIDA  K G + EA ++ D M ++ +  +  T +++++  C   +LDEA 
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + + V+Y TLI G+ + ++ +  ++L+ EM +R ++ +T TY  +I G 
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ + + A  +  +++  G++PD  T++ ++ G C+ G+VE AL     +     +PDI
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F S  LKG   + VTY T++S  C++   E+A  L  E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E+   PD  TY  +  A +  G
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDG 585



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 150/449 (33%), Positives = 242/449 (53%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ T+NT++  LF+  + +E   L+  M  +G  P+  TY I+V+G CK G 
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M Q K  P V  YN +I+  CN   + +A  L  EM++  + P+VVTYN+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      GR  +A +L+ ++ E  I PN VT + +I  + KEGK+ +A K+   M +  
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY++LI+  C    ++EA  M ++M  K    N +T NT++   C  K++DE  
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G+F+  + + A  ++ +M    ++P   TY+ ++ GL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E A+ +   L +S M PD  T+N +I G C  G+VE        +  K  KP++
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   ++SG CR+G+ E+A   FR    +G   DS TYNTLI +  ++     +  L+ E
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M   +   D  T   + T ++  GRL+++
Sbjct: 597 MRSCRFVGDASTIGLV-TNMLHDGRLDKS 624



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 265/523 (50%), Gaps = 17/523 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V ++ +L A+ K  K + V  L   M+  G+  N  TY+IL++ +C+   L  A+ 
Sbjct: 78  FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD+ T N L+NG+C+   + +A  L  +M  +   PD  T+NTLI+  F
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              R+ EA  L+D +   G +P+ VT+ I++   CK G ID A  +++ ME+    P  V
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNT+IDA C   N+ +A  +   M  KG++ N +T N+++  LC   +  +A  LL+  
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++  LI  + ++ K   A KL+DEM +R I P  FTY+++I G     + 
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     P+  T+NT+I GFC   +V++ ++   +M ++    + VT   L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  +    + A   F+  +  G   D +TY+ L+  LC   ++E A  +   ++  K+
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD YTY  +   + ++G++E+       +   G      V+PN            ++Y+
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG------VKPNV-----------VTYT 540

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             ++  C +G  ++A  +F E +++G   +  TY  L+   ++
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 232/488 (47%), Gaps = 18/488 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  ++ L++        +    L ++M++L +  ++ TY+ 
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  ++ ++ + G +P+ VT N ++  +C   +I  A  +V  M E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD  T+NTLI    +     EA  ++D M  KG + + +T   +++ LC    +D A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +       V Y T+I      +  N AL L+ EM  + I P+  TYN++I  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + P+  TF+ +I  F  EG++ +A + +++M+++S  PDI
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T + L++G C    L++A   F   I K    + VTYNTLI   CK +R+++   L  E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP-------NTSK 473
           M ++ L  +  TY  +     ++   + AQ     MV  G +   +          N  K
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 474 TP-----------EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                         +++P   +Y+  I   C  G+ +D   +F     KG+  N  TY  
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541

Query: 523 LMNGLIKR 530
           +M+G  ++
Sbjct: 542 MMSGFCRK 549



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 174/368 (47%), Gaps = 17/368 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D A  +  +M ++   P  V ++ L+ A  K    +    + + M   G+  N  T +
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C   +L  A  +L    K GY  D V+  +L+ G+    + + A+ L  +M E 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P +FT+N +I GL +  +  +A+ +++ ++  G  PD  T+  +++G C  G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L    KM +   +P +V  N ++  LC    +  AL  F     KG   + VTYN+LI  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M E+K+ P+  T++A+  A V+ G+L EA+K    M++      
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 354

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP   +YS  IN  C   R  +A  +FE    K    N  TY  L+
Sbjct: 355 -----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403

Query: 525 NGLIKRRK 532
            G  K ++
Sbjct: 404 KGFCKAKR 411



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 20/286 (6%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D K + A+ L+ +M + +  PS   ++ ++  +++  K +  I +  ++   G+  +  T
Sbjct: 59  DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           ++ +I+ FC   Q+  AL    KM++  ++PDIVT N LL+G C    +  A+      +
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   DS T+NTLI  L +  R  +A  L+  M  K   PD  TY  +   L + G ++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 448 EAQKFTSIMVETGKINHQVVQPN-------------------TSKTPEEIDPSSISYSEK 488
            A      M E GKI   VV  N                   T    + I P+ ++Y+  
Sbjct: 239 LALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           I   C+ GR+ DA ++  +  ++ I  N  T+  L++  +K  K +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN +++ + K GK+ +  DL   +  +G+ PN  TY  ++SG+C+ G  +EA  +
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +   LPD  TYN LI      G    +  L +EM S + + D  T   L+     
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLH 617

Query: 128 SGRSMEAF 135
            GR  ++F
Sbjct: 618 DGRLDKSF 625


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 276/542 (50%), Gaps = 23/542 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT+++   K G L   + L+ ++    L PN  TY  L+  YCK   L++A
Sbjct: 47  GPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDA 106

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + D MT    +PDV TY  ++NG C +G +EEA  + +EME + ++P+  +Y TLI+ 
Sbjct: 107 LYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS 166

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+ G   EAF L   +   GI  + V +  ++    K G  + A  + + + E    P+
Sbjct: 167 LFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPN 226

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           CVTY+ LID +CK G++ +   ++  M  K +  N I  ++I+     +  L+EA  ++ 
Sbjct: 227 CVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMR 286

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +R    +   YGTLI GYF+ ++   AL L+ EMK R +  + F  ++ +  L +SG
Sbjct: 287 KMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSG 346

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A ++  +++  G++PD   + +++ GF   G+   A     +M EKS   D+V  N
Sbjct: 347 RMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYN 406

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++GL + G  E    F       G A DS T+NT+I++ CKE  L +A  LL+EM+  
Sbjct: 407 VLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPE---- 476
            L P+  T   +   L  +G +E+     + M+  G       H+ V   +SK+      
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525

Query: 477 ------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                       ++D S  +Y+  I+  C  G  + A  +F++   KGI  +  TY  L+
Sbjct: 526 LHXHDQLVGMGVKLDLS--TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI 583

Query: 525 NG 526
           +G
Sbjct: 584 HG 585



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 259/529 (48%), Gaps = 19/529 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y  ++D LFK G  N   D+   + ++ LVPN  TY+ L+ G+CKLG + +   ++
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M +    P+V  Y+ +++G+   G+L EA  + ++M    +LP+V  Y TLI+ +F++
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +   A  L  E+   G++ N    +  +    + G++++A ++ ++M   G  PD V Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            +++D   KAG   +AF +   M  K    + +  N +++ L    K  E+        +
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQ 429

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D  ++ T+I  Y ++     ALKL +EMK   + P++ T N ++  L  +G+ E+
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            +D+LN++L  G  P  TT   ++       + +  L  H+++V    K D+ T N L+S
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIS 549

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
             CR G++ +A   F+  + KG   D +TYN LI   C    L+ AF + S+M  + + P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY  +   L  +  ++EA    + M E G +                 P++ +Y   
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLV-----------------PNATTYDIL 652

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           ++ H   G  K+ ++++ E   KG      TY N++     + K +S+A
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTY-NVLISCFAKGKKMSQA 700



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 263/543 (48%), Gaps = 43/543 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ VTY+ ++D   K G +N+   LL +M+++ + PN   Y+ +V GY K G L EAM 
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNA--------------------------------- 93
           V+  M Q   LP+V+ Y  LI+G+  A                                 
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343

Query: 94  --GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +EEA  L K+M S  LLPD V Y ++++ FF++G+  +AF +  E+ E     + V
Sbjct: 344 RSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVV 403

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +N++I    K GK +        M + G +PD  T+NT+I+A CK GN+  A ++++ M
Sbjct: 404 AYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GLK N+IT N ++  LC   ++++   LLN     G++    ++  ++    +  +A
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +  L   D++    +     TYN +I    + G   +A  +  +++  G++ D  T+N +
Sbjct: 523 DVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IHG+C    ++KA   H++M+ +   P++ T NILL GL    ++++A         +G 
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++ TY+ L+S   K   +++   L  EM  K   P   TY  + +   +  ++ +A++
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKE 702

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDP-SSISYSEKINEHCSQGRYKDALQIFEETRQ 510
               M   G      + PN+S     I     +S   ++N+   +    +A ++FEE  +
Sbjct: 703 LMQEMQVRG------IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 511 KGI 513
           KG 
Sbjct: 757 KGF 759



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 237/464 (51%), Gaps = 15/464 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   +N   ++ ++ L + G++ E  +L  DM  +GL+P+R  Y  ++ G+ K G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE-EAFRLRKEMESLKLLPDVVTYN 119
             +A  +   MT+  S  DV  YN+LING    G  E E+F     M  L L PD  T+N
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH--TGMRQLGLAPDSATFN 440

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN + + G    A KL++E+  +G+KPN++T NI+++  C  G+I+K   ++ +M   
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           GF P   T+  ++DA+ K+   +      D +   G+K++  T NT++ T C    +  A
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            ++      +G   D ++Y  LI GY       +A  +  +M    + P+  TYN ++ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS +   ++A  ++N++ + G++P+ TT++ ++ G    G +++ ++ + +M+ K F P 
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS---LCKERRLE---- 412
             T N+L+S   +   + +A +  +   ++G   +S TY+ LI     L K+  L     
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740

Query: 413 -----DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
                +A  L  EM EK   P   T A I   L + G+  +AQ+
Sbjct: 741 RSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQR 784



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 174/363 (47%), Gaps = 47/363 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ T+NT+++A  K+G L     LL++MK  GL PN  T NILV   C  G 
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 61  LKEAMRVVDLM---------TQNKSLPD--------------------------VWTYNM 85
           +++ M +++ M         T +K++ D                          + TYN 
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI+ +C  GM+  A  + K+M    +L D++TYN LI+ +  S    +AF +  ++   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+NI++        I +A  +V  M+E G  P+  TY+ L+  + K GNM+E  
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++   M  KG    T T N ++      KK+ +A  L+     RG   +  +Y  LI G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 266 FRDEKA---NRALK---------LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           ++  K    N++LK         L++EM E+  +P   T   + + L++ GK   A  +L
Sbjct: 727 YKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786

Query: 314 NEL 316
           N+L
Sbjct: 787 NKL 789



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 176/393 (44%), Gaps = 48/393 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V YN +++ LFK GK  E     + M++ GL P+  T+N +++ YCK G L  A++++
Sbjct: 401 DVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P+  T N+L+   C AG +E+   L  +M  +   P   T+  +++   +S
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R+       D+L   G+K +  T+N +I  +C+ G I +A  + ++M   G   D +TY
Sbjct: 520 RRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI   C + ++++AF +   M  +G+  N  T N +L  L   + + EA  L+N   +
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   +  +Y  L++G+ +       +KL+ EM  +  +P T TYN +I   ++  K  Q
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699

Query: 309 AIDMLNELL-----------------------------------------------QSGM 321
           A +++ E+                                                + G 
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGF 759

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           IP E T   I       G+   A +  NK+ +K
Sbjct: 760 IPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 20/265 (7%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +I  S   +N +I G  ++G+  +A+++L  +   G  PD  T+NT+++GFC  G +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +   ++   + +P+++T   L+   C+   LE AL  +    +K    D VTY  +++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LCK  ++E+A  +  EMEE  + P+R++YA +  +L + G + EA      MV  G I  
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG-IGF 190

Query: 465 QVV-------------QPNTSK------TPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
            VV               N ++        E + P+ ++YS  I+ HC  G       + 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 506 EETRQKGIAINKSTYMNLMNGLIKR 530
           +E  +K I  N   Y ++++G  K+
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKK 275


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 245/457 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG   +  + N +++ L +   ++    ++  M K G+ P+  T+N L++G C  G 
Sbjct: 122 MDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGK 181

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA+ + + M  +   P+V +YN +ING C  G    A R+ ++ME  +  P+VVTYNT
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNT 241

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EA + + E+ + GI P+ VT+N ++  +C  G++++A ++ + M    
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT+N L+D  CK G + EA  + + M  KG + N  T N ++   C   ++DEA 
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L     +G   +  SY  LI GY + ++ N A +L  EM E+ + P T TY+ ++ GL
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+  +A+++  E+  SG++PD   ++ ++ GFC  G +++AL+   +M E+  KP+I
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +   IL+ G+   G LE A + F      G   D  TYN +I  L KE   ++A+    +
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           ME+    PD  +Y  I    +++     A +    MV
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 231/430 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD +T+NT+++ L  +GK+ E   L ++M   G  PN  +YN +++G CK G    
Sbjct: 160 LGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIM 219

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+RV   M QN+  P+V TYN +I+  C   ++ EA     EM    + PDVVTYNT+++
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILH 279

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   G+  EA +L  E+    + P+ VT NI++   CKEG + +A  +   M E G  P
Sbjct: 280 GFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP 339

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN L+D  C    M+EA +++ +M  KG   N  + N +++  C  K+++EA  LL
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL 399

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  S++    D V+Y TL+ G  +  +   AL L+ EM    ++P    Y+ ++ G  + 
Sbjct: 400 SEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH 459

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A+ +L E+ +  + P+   +  +I G    G++E A +  +K+     +PDI T 
Sbjct: 460 GHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTY 519

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+++ GL +EG+ ++A +FFR     G   DS +YN +I    + +    A  L+ EM  
Sbjct: 520 NVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVG 579

Query: 424 KKLGPDRYTY 433
           K+   D  T+
Sbjct: 580 KRFSADSSTF 589



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 197/374 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTYNTI+D+L K   +NE  + LS+M  +G+ P+  TYN ++ G+C LG L EA R+
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M     +PD  T+N+L++G C  GM+ EA  + + M      P+  TYN L++ +  
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCL 353

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             +  EA K++  +   G  PN  ++NI+I  YCK  ++++A +++  M E   +PD VT
Sbjct: 354 HNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+TL+   C+ G   EA  +   M   GL  + +  + +L   C    LDEA  LL    
Sbjct: 414 YSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH 473

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +R    + + Y  LI G F   K   A +L+ ++    I P  +TYN MI GL + G ++
Sbjct: 474 ERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSD 533

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A +   ++   G +PD  ++N II GF        A+Q  ++MV K F  D  T  +LL
Sbjct: 534 EAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593

Query: 368 SGLCREGILEKALK 381
                + I+ + ++
Sbjct: 594 DLESHDEIISRFMR 607



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 199/416 (47%), Gaps = 17/416 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P VV +   +    +  +   A  L +++D  G+  N  + N++I   C+   +D A  +
Sbjct: 94  PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  M + G  PD +T+NTLI+  C  G ++EA  + + M   G + N I+ NT+++ LC 
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
                 A  +     +     + V+Y T+I    +D   N A++   EM +R I P   T
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN ++ G    G+  +A  +  E++   ++PD  TFN ++ G C EG V +A      M 
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           EK  +P+  T N L+ G C    +++A+K     I KG A +  +YN LI+  CK +R+ 
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  LLSEM EK L PD  TY+ +   L + GR  EA      M  +G +          
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLL---------- 443

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  P  ++YS  ++  C  G   +AL++ +E  ++ I  N   Y  L+ G+ 
Sbjct: 444 -------PDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 220/459 (47%), Gaps = 17/459 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    P V  +   +           A  L  +M+   +  +V + N LIN       
Sbjct: 87  MVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSH 146

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  ++ ++ + GI+P+A+T N +I   C EGKI +A  +   M  +G  P+ ++YNT
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNT 206

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +I+  CK GN   A R+   M +   K N +T NTI+ +LC ++ ++EA   L+    RG
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y T++ G+    + N A +L+ EM  R +MP T T+N ++ GL + G   +A 
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +   + + G  P+  T+N ++ G+C   Q+++A++    M+ K   P++ + NIL++G 
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A +       K    D+VTY+TL+  LC+  R  +A  L  EM    L PD 
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y+ +     + G L+EA K    M E                   I P+ I Y+  I 
Sbjct: 447 MAYSILLDGFCKHGHLDEALKLLKEMHE-----------------RRIKPNIILYTILIR 489

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                G+ + A ++F +    GI  +  TY  ++ GL+K
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLK 528



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 182/328 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNTIL      G+LNE   L  +M  + ++P+  T+NILV G CK G + EA
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA 325

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V + MT+  + P+ +TYN L++G+C    ++EA ++   M      P++ +YN LIN 
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILING 385

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +S R  EA +L+ E+ E  + P+ VT++ +++  C+ G+  +A  + + M  +G  PD
Sbjct: 386 YCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPD 445

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + Y+ L+D  CK G+++EA +++  M  + +K N I    ++  +    KL+ A  L +
Sbjct: 446 LMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFS 505

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S  G   D  +Y  +I G  ++  ++ A + + +M++   +P + +YN +I G  Q+ 
Sbjct: 506 KLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQ 565

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTII 332
            +  AI +++E++      D +TF  ++
Sbjct: 566 DSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 162/297 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G   +PD VT+N ++D L K+G ++E R +   M ++G  PN  TYN L+ GYC    
Sbjct: 297 MVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ 356

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA++V+ +M      P++ +YN+LING+C +  + EA RL  EM    L PD VTY+T
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    + GR  EA  L  E+   G+ P+ + ++I++  +CK G +D+A K+++ M E  
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ + Y  LI     AG +E A  +   +   G++ +  T N ++  L  E   DEAY
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
                    G+  D  SY  +I G+ +++ ++ A++L DEM  ++    + T+  ++
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 173/364 (47%), Gaps = 17/364 (4%)

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           ID A      M      P  V +   + +  K      A  + + M   G+  N  +LN 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +++ LC    +D A  ++    K G   D +++ TLI G   + K   A+ L++EM    
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P+  +YN +I GL ++G T  A+ +  ++ Q+   P+  T+NTII   C +  V +A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +F ++MV++   PD+VT N +L G C  G L +A + F+  + +    D+VT+N L+  L
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CKE  + +A  +   M EK   P+ YTY A+        +++EA K   IM+  G     
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG----- 371

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
              PN S           SY+  IN +C   R  +A ++  E  +K +  +  TY  LM 
Sbjct: 372 -CAPNLS-----------SYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 419

Query: 526 GLIK 529
           GL +
Sbjct: 420 GLCQ 423



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 160/333 (48%), Gaps = 17/333 (5%)

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           ++++A      M R   + + +     L ++  +K+   A  L N     G   +  S  
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI    R    + A+ +  +M +  I P   T+N +I GL   GK ++A+ + NE++ S
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G  P+  ++NT+I+G C  G    A++   KM +   KP++VT N ++  LC++ ++ +A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
           ++F    + +G   D VTYNT++   C   +L +A  L  EM  + + PD  T+  +   
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L + G + EA+  +  M E G                  +P++ +Y+  ++ +C   +  
Sbjct: 316 LCKEGMVSEARCVSETMTEKGA-----------------EPNAYTYNALMDGYCLHNQMD 358

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +A+++      KG A N S+Y  L+NG  K ++
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 17/262 (6%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D   + AL  +  M      PS   +   +  +++  +   A+ + N++   G+  +  +
Sbjct: 74  DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            N +I+  C    V+ A+    KM +   +PD +T N L++GLC EG +++A+  F   +
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   + ++YNT+I+ LCK      A  +  +ME+ +  P+  TY  I  +L +   + 
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA +F S MV+ G                 I P  ++Y+  ++  CS G+  +A ++F+E
Sbjct: 254 EAVEFLSEMVDRG-----------------IPPDVVTYNTILHGFCSLGQLNEATRLFKE 296

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
              + +  +  T+  L++GL K
Sbjct: 297 MVGRNVMPDTVTFNILVDGLCK 318



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           ++ AL  F   +        V +   + S+ K+++   A  L ++M+   +  + Y+   
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L    RL       S+M +  K+               I P +I+++  IN  C++
Sbjct: 137 LINCLC---RLSHVDFAVSVMGKMFKLG--------------IQPDAITFNTLINGLCNE 179

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           G+ K+A+ +F E    G   N  +Y  ++NGL K   +I
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI 218


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 262/520 (50%), Gaps = 21/520 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +T+NT+++ L KKGK+ E   +LS + +  L P+  TY  L+ G+C+   L  A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M +    P+  TY+ LING CN G ++EA  + +EM    + P V TY   I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                   EA +L+  + + G +PN  T+  +I    + GK++ A  +   M + G  P+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  C  G    A ++   M   G   NT T N I+  LC    +++A +L  
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G     V+Y TLI GY      N A +L D MKE    P  +TYN ++ G S+ G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A     E+++ G+ P+  ++  +I G   +G+V+ AL    +M E    P++ + N
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++GL +E    +A K     + +G   + +TY TLI  LC+  R + AF +  +ME++
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           K  P+ YTY+++   L + G+ +EA++ + I  E                     P+  +
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCE---------------------PTLDT 651

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           YS  ++  C +GR+ +A Q+ ++ +++G   ++  Y +L+
Sbjct: 652 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 244/456 (53%), Gaps = 4/456 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++  L + GKL     L   M K+GLVPN  TYN L++  C  G 
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+++   M  + SL +  TYN +I G C  G +E+A  L ++M  +  LP VVTYNT
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +   G    A +L+D + E+G +P+  T+N ++  + K GK++ A    + M E G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ V+Y  LID + K G ++ A  ++  M   G   N  + N +++ L  E +  EA 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   ++G   + ++Y TLI G  R+ +   A K++ +M++R+ +P+ +TY+++I+GL
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK ++A + ++E+   G  P   T++T++ G C +G+  +A Q    M E+ F PD 
Sbjct: 629 CQEGKADEA-ERMSEI---GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 684

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                LL   C+   ++ ALK F S   KG  +    Y  LI +LCK  ++E+A  L   
Sbjct: 685 EIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 744

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           M EK+   D   +  +   L++ G L+   K   IM
Sbjct: 745 MLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 244/485 (50%), Gaps = 31/485 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P++VTY+T+++ L  +G+++E  D+L +M ++G+ P   TY + ++  C +   +EA
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V  M +    P+V TY  LI+G    G LE A  L  +M    L+P+ VTYN LIN 
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR   A K+   ++ HG   N  T+N +IK  C  G I+KA  +   M + G  P 
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI+     GN+  A R++D+M   G + +  T N ++       KL+ A     
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + VSY  LI G+ +D K + AL L   M+E    P+  +YNA+I GLS+  
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ-FHN-------------- 349
           +  +A  + +++++ G++P+  T+ T+I G C  G+ + A + FH+              
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622

Query: 350 ----------------KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
                           +M E   +P + T + L+SGLCR+G   +A +  +    +G   
Sbjct: 623 SLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 682

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D   Y +L+ + CK   ++ A  +   +E K        Y A+  AL ++G++EEAQ   
Sbjct: 683 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 742

Query: 454 SIMVE 458
             M+E
Sbjct: 743 DNMLE 747



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 245/509 (48%), Gaps = 17/509 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           ++  V D L+++   G   +  + N L+    K   ++ A  +   M  +   P + T+N
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            LIN     G + EA  +  ++    L PDV TY +LI     +     AF + D + + 
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 262

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G  PN+VT++ +I   C EG++D+A  ++  M E G  P   TY   I A C   + EEA
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M ++G + N  T   ++  L    KL+ A  L +   K G   + V+Y  LI  
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                + + ALK++  M+    + +T TYN +I GL   G  E+A+ +  ++L+ G +P 
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+NT+I+G+ ++G V  A +  + M E   +PD  T N L+SG  + G LE A  +F+
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             +  G   + V+Y  LI    K+ +++ A  LL  MEE    P+  +Y A+   L +  
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           R  EA+K    MVE G +                 P+ I+Y+  I+  C  GR + A +I
Sbjct: 563 RFSEAEKICDKMVEQGLL-----------------PNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           F +  ++    N  TY +L+ GL +  K+
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 172/312 (55%), Gaps = 4/312 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V+Y  ++D   K GK++    LL  M++ G  PN  +YN +++G  K     EA
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D M +   LP+V TY  LI+G C  G  + AF++  +ME  K LP++ TY++LI  
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G++ EA    + + E G +P   T++ ++   C++G+  +A ++V++M+E GF PD
Sbjct: 628 LCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y +L+ A+CK   ++ A ++   +  KG +++      ++  LC   +++EA  L +
Sbjct: 684 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 743

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++ +  DE+ +  L+ G  ++ + +  +KL   M+ +   P+  TY  +   LS+ G
Sbjct: 744 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 803

Query: 305 KTEQAIDMLNEL 316
           K+ ++  + ++L
Sbjct: 804 KSIESEPLADKL 815



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 143/282 (50%), Gaps = 4/282 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  +YN +++ L K+ + +E   +   M +QGL+PN  TY  L+ G C+ G 
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A ++   M + K LP+++TY+ LI G C  G  +EA R    M  +   P + TY+T
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYST 654

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++     GR  EA +L+ ++ E G  P+   +  ++  +CK  ++D A KI  ++E  G
Sbjct: 655 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 714

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F      Y  LI A CKAG +EEA  + D M  K    + I    ++  L  E +LD   
Sbjct: 715 FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCM 774

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            LL+    + +  +  +Y  L     R  K+  +  L D++K
Sbjct: 775 KLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 182/375 (48%), Gaps = 17/375 (4%)

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           +MIK    E +I +    +  +   GF     + NTL+    K   +E A  +   M   
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G++ + +T NT+++ L  + K+ EA ++L+   +     D  +Y +LI G+ R+   + A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             ++D M +    P++ TY+ +I GL   G+ ++A+DML E+++ G+ P   T+   I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C+    E+A++   +M ++  +P++ T   L+SGL R G LE A+  +   + +G   +
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +VTYN LI+ LC   R   A  +   ME      +  TY  I   L   G +E+A     
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M++ G +                 P+ ++Y+  IN + ++G   +A ++ +  ++ G  
Sbjct: 433 KMLKMGPL-----------------PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 515 INKSTYMNLMNGLIK 529
            ++ TY  L++G  K
Sbjct: 476 PDEWTYNELVSGFSK 490



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 119/300 (39%), Gaps = 53/300 (17%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           +++R   P+      MI       +  +  D LNE+   G      + NT++        
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 178

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLS-------------------------------- 368
           VE A   + +M+    +P ++T N L++                                
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 369 ---GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
              G CR   L+ A   F   + +G   +SVTY+TLI+ LC E R+++A  +L EM EK 
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 426 LGPDRYTYAAIHTALV----------------ESGRLEEAQKFTSIMVETGKINHQVVQP 469
           + P  YTY    TAL                 + G     Q +T+++    ++    V  
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 470 NTSKT--PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   E + P++++Y+  INE C  GR+  AL+IF      G   N  TY  ++ GL
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 276/542 (50%), Gaps = 23/542 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT+++   K G L   + L+ ++    L PN  TY  L+  YCK   L++A
Sbjct: 47  GPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDA 106

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + D MT    +PDV TY  ++NG C +G +EEA  + +EME + ++P+  +Y TLI+ 
Sbjct: 107 LYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS 166

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+ G   EAF L   +   GI  + V +  ++    K G  + A  + + + E    P+
Sbjct: 167 LFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPN 226

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           CVTY+ LID +CK G++ +   ++  M  K +  N I  ++I+     +  L+EA  ++ 
Sbjct: 227 CVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMR 286

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +R    +   YGTLI GYF+ ++   AL L+ EMK R +  + F  ++ +  L +SG
Sbjct: 287 KMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSG 346

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A ++  +++  G++PD   + +++ GF   G+   A     +M EKS   D+V  N
Sbjct: 347 RMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYN 406

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++GL + G  E    F       G A DS T+NT+I++ CKE  L +A  LL+EM+  
Sbjct: 407 VLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPE---- 476
            L P+  T   +   L  +G +E+     + M+  G       H+ V   +SK+      
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525

Query: 477 ------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                       ++D S  +Y+  I+  C  G  + A  +F++   KGI  +  TY  L+
Sbjct: 526 LHMHDQLVGMGVKLDLS--TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI 583

Query: 525 NG 526
           +G
Sbjct: 584 HG 585



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 259/529 (48%), Gaps = 19/529 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y  ++D LFK G  N   D+   + ++ LVPN  TY+ L+ G+CKLG + +   ++
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M +    P+V  Y+ +++G+   G+L EA  + ++M    +LP+V  Y TLI+ +F++
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +   A  L  E+   G++ N    +  +    + G++++A ++ ++M   G  PD V Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            +++D   KAG   +AF +   M  K    + +  N +++ L    K  E+        +
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQ 429

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D  ++ T+I  Y ++     ALKL +EMK   + P++ T N ++  L  +G+ E+
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            +D+LN++L  G  P  TT   ++       + +  L  H+++V    K D+ T N L+S
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
             CR G++ +A   F+  + KG   D +TYN LI   C    L+ AF + S+M  + + P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY  +   L  +  ++EA    + M E G +                 P++ +Y   
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLV-----------------PNATTYDIL 652

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           ++ H   G  K+ ++++ E   KG      TY N++     + K +S+A
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTY-NVLISCFAKGKKMSQA 700



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 264/543 (48%), Gaps = 43/543 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ VTY+ ++D   K G +N+   LL +M+++ + PN   Y+ +V GY K G L EAM 
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNA--------------------------------- 93
           V+  M Q   LP+V+ Y  LI+G+  A                                 
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343

Query: 94  --GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +EEA  L K+M S  LLPD V Y ++++ FF++G+  +AF +  E+ E     + V
Sbjct: 344 RSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVV 403

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +N++I    K GK +        M + G +PD  T+NT+I+A CK GN+  A ++++ M
Sbjct: 404 AYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GLK N+IT N ++  LC   ++++   LLN     G++    ++  ++    +  +A
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +  L + D++    +     TYN +I    + G   +A  +  +++  G++ D  T+N +
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IHG+C    ++KA   H++M+ +   P++ T NILL GL    ++++A         +G 
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++ TY+ L+S   K   +++   L  EM  K   P   TY  + +   +  ++ +A++
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKE 702

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDP-SSISYSEKINEHCSQGRYKDALQIFEETRQ 510
               M   G      + PN+S     I     +S   ++N+   +    +A ++FEE  +
Sbjct: 703 LMQEMQVRG------IPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 511 KGI 513
           KG 
Sbjct: 757 KGF 759



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 238/465 (51%), Gaps = 15/465 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   +N   ++ ++ L + G++ E  +L  DM  +GL+P+R  Y  ++ G+ K G 
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE-EAFRLRKEMESLKLLPDVVTYN 119
             +A  +   MT+  S  DV  YN+LING    G  E E+F     M  L L PD  T+N
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH--TGMRQLGLAPDSATFN 440

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN + + G    A KL++E+  +G+KPN++T NI+++  C  G+I+K   ++ +M   
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           GF P   T+  ++DA+ K+   +    M D +   G+K++  T NT++ T C    +  A
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            ++      +G   D ++Y  LI GY       +A  +  +M    + P+  TYN ++ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS +   ++A  ++N++ + G++P+ TT++ ++ G    G +++ ++ + +M+ K F P 
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS---LCKERRLE---- 412
             T N+L+S   +   + +A +  +   ++G   +S TY+ LI     L K+  L     
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740

Query: 413 -----DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
                +A  L  EM EK   P   T A I   L + G+  +AQ+ 
Sbjct: 741 RSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRI 785



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 174/363 (47%), Gaps = 47/363 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ T+NT+++A  K+G L     LL++MK  GL PN  T NILV   C  G 
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 61  LKEAMRVVDLM---------TQNKSLPD--------------------------VWTYNM 85
           +++ M +++ M         T +K++ D                          + TYN 
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI+ +C  GM+  A  + K+M    +L D++TYN LI+ +  S    +AF +  ++   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T+NI++        I +A  +V  M+E G  P+  TY+ L+  + K GNM+E  
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++   M  KG    T T N ++      KK+ +A  L+     RG   +  +Y  LI G+
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726

Query: 266 FRDEKA---NRALK---------LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           ++  K    N++LK         L++EM E+  +P   T   + + L++ GK   A  +L
Sbjct: 727 YKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786

Query: 314 NEL 316
           N+L
Sbjct: 787 NKL 789



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 177/393 (45%), Gaps = 48/393 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V YN +++ LFK GK  E     + M++ GL P+  T+N +++ YCK G L  A++++
Sbjct: 401 DVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P+  T N+L+   C AG +E+   L  +M  +   P   T+  +++   +S
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R+     + D+L   G+K +  T+N +I  +C+ G I +A  + ++M   G   D +TY
Sbjct: 520 RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI   C + ++++AF +   M  +G+  N  T N +L  L   + + EA  L+N   +
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   +  +Y  L++G+ +       +KL+ EM  +  +P T TYN +I   ++  K  Q
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699

Query: 309 AIDMLNELL-----------------------------------------------QSGM 321
           A +++ E+                                                + G 
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGF 759

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           IP E T   I       G+   A +  NK+ +K
Sbjct: 760 IPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 20/265 (7%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +I  S   +N +I G  ++G+  +A+++L  +   G  PD  T+NT+++GFC  G +  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +   ++   + +P+++T   L+   C+   LE AL  +    +K    D VTY  +++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LCK  ++E+A  +  EMEE  + P+R++YA +  +L + G + EA      MV  G I  
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG-IGF 190

Query: 465 QVV-------------QPNTSK------TPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
            VV               N ++        E + P+ ++YS  I+ HC  G       + 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 506 EETRQKGIAINKSTYMNLMNGLIKR 530
           +E  +K I  N   Y ++++G  K+
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKK 275


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 276/535 (51%), Gaps = 19/535 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           + GF   P   T N +L  L K+ K+  V     +M  + + P+ +T+NIL++  C  G 
Sbjct: 126 IRGFN--PSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGK 183

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+A  ++  M ++  +P V TYN ++N +C  G  + A  L  +M S  +  D  TYN 
Sbjct: 184 LKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNM 243

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++ RS + + L+ ++ +  I PN +T+N +I  + KEGKI  A +I + M    
Sbjct: 244 LVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLN 303

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+CVTYN LID +C  GN E+A  ++++M   G K N ++ + +L+ LC   K + + 
Sbjct: 304 LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSK 363

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L      G  +  ++Y  +I G  R+   N ++KL D+M +  ++P   T++ +I G 
Sbjct: 364 SILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGF 423

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK +   +++ ++ ++G+ P+   + T+I+ +C  G V +A + +  M    +  + 
Sbjct: 424 CRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANC 483

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             CN+L+S LC++G +  A  FF      G   +S+T++ +I+          AF +  E
Sbjct: 484 FICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDE 543

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +    P  +TY  +  AL  +G+ +EA++         K+++          P  +D 
Sbjct: 544 MIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLD------KLHY---------IPSAVD- 587

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
            +++Y+  + E    G   DA+ +F+E  Q+ +  +  TY  +  GLI+R K ++
Sbjct: 588 -TVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVA 641



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 256/539 (47%), Gaps = 17/539 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VTYNT+L+   KKG+     +L+  M  +G+  +  TYN+LV   CK   
Sbjct: 194 MEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNR 253

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   ++  M +    P+  TYN +ING+   G +  A R+ +EM  L LLP+ VTYN 
Sbjct: 254 SAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNA 313

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A  +++ ++  G KPN V+++ ++   C+  K + +  I+  M  NG
Sbjct: 314 LIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNG 373

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
               C+ Y  +ID  C+ G + E+ +++D M + G+  + +T + +++  C   K+    
Sbjct: 374 MIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVK 433

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++    K G   + + Y TLI  Y +      A K++  M       + F  N ++  L
Sbjct: 434 EIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSL 493

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK   A    + + + G +P+  TF+ II+G+ + G   KA    ++M++    P  
Sbjct: 494 CKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSH 553

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   LL  LCR G  ++A +          AVD+VTYNT++    K   L DA  L  E
Sbjct: 554 FTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDE 613

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ + PD YTYA I   L+  G++  A  F   ++  G ++                P
Sbjct: 614 MVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVS----------------P 657

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
             + Y+  ++     G+ K AL   E+  + G+  +      ++NG   R   ++KA D
Sbjct: 658 EKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGY-SRMGKMAKAGD 715



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 251/546 (45%), Gaps = 24/546 (4%)

Query: 14   NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
            N ++ +L K GK+         M K G VPN  T++ +++GY   G   +A  + D M +
Sbjct: 487  NVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIK 546

Query: 74   NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
                P  +TY  L+   C AG  +EA RL  ++  +    D VTYNT++   F+SG   +
Sbjct: 547  AGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTD 606

Query: 134  AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLI 192
            A  L DE+ +  + P++ T+ I+     + GK+  A     N+   G  SP+ V Y T +
Sbjct: 607  AVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFV 666

Query: 193  DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA---YMLLNSASKR 249
            D   +AG  + A    + M + GL  + I  N IL+      K+ +A   + ++ S    
Sbjct: 667  DGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITI 726

Query: 250  GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               L   +Y  L+ GY + +  ++   L++ M    I P   T +++I G  +S   +  
Sbjct: 727  SPSL--ATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVG 784

Query: 310  IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            + +L ++L  G+  D+ TFN +I  +C   +V KA    N M      PD+ T + ++S 
Sbjct: 785  LKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISV 844

Query: 370  LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            L R   ++++       + +G   D   Y  L++ +C+   +  AF L  EME   +   
Sbjct: 845  LSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSG 904

Query: 430  RYTYAAIHTALVESGRLEEAQKFTSIMVETGKI---------------NHQVVQPNTSKT 474
                +A+   L + G++EEA+     M+    I               N  +V+    K 
Sbjct: 905  DVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKD 964

Query: 475  PE---EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 ++    I+Y+  I+  C+ G    AL++++E +Q+G+  N +TY  L++ +    
Sbjct: 965  TMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTND 1024

Query: 532  KSISKA 537
             S++K 
Sbjct: 1025 ISLAKG 1030



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 208/470 (44%), Gaps = 37/470 (7%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P + TY  +L AL + GK  E + LL  +       +  TYN ++    K G L +A+ +
Sbjct: 551  PSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVAL 610

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLINRFF 126
             D M Q   LPD +TY ++  G    G +  A      +     + P+ V Y T ++  F
Sbjct: 611  FDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLF 670

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDC 185
             +G+S  A    ++++++G+  + +  N+++  Y + GK+ KA  I   M      SP  
Sbjct: 671  RAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSL 730

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             TYN L+    K  N+ +   + ++M R G+  + +T ++++   C    LD    LL  
Sbjct: 731  ATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKK 790

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                G  +D+ ++  LI  Y   ++  +A  L + M    I P   T++++I  LS+   
Sbjct: 791  MLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVST 850

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK--------------- 350
             +++  +L+E+L+ G IPD   +  +++  C  G +  A +  ++               
Sbjct: 851  VQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESA 910

Query: 351  --------------------MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
                                M+ KS  P I T   L+   CR   L +ALK   +     
Sbjct: 911  LVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCD 970

Query: 391  KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
              +D + YN LIS LC +  +  A  L  E++++ L P+  TY  +  A+
Sbjct: 971  VKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 211/421 (50%), Gaps = 3/421 (0%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEAM 65
            LPD+ TY  I   L ++GK+        ++  +G V P +  Y   V G  + G  K A+
Sbjct: 620  LPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAAL 679

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYNTLINR 124
               + M +N    D+   N+++NG+   G + +A  +   M S + + P + TYN L++ 
Sbjct: 680  YFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHG 739

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            + +     +   L + +   GI P+ +T + +I  +CK   +D   K+++ M  +G + D
Sbjct: 740  YAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVD 799

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+N LI   C+   + +AF ++++M    +  +  T ++I+  L     + E+++LL+
Sbjct: 800  QCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLH 859

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +RG   D   Y  L+    R    + A KL DEM+   I       +A++ GL++ G
Sbjct: 860  EMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCG 919

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            K E+A  +L+ +L+  +IP   TF T++H FC    + +AL+  + M     K D++  N
Sbjct: 920  KVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYN 979

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL-CKERRLEDAFGLLSEMEE 423
            +L+SGLC +G +  ALK ++    +G   +  TY  LI ++   +  L     LL +++E
Sbjct: 980  VLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQE 1039

Query: 424  K 424
            +
Sbjct: 1040 R 1040



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 196/436 (44%), Gaps = 38/436 (8%)

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI----------------KP 148
           E+  L  +  + T+  +  R +E+ +S     ++  L + G+                K 
Sbjct: 42  ELRHLTHMLSITTHILVRARLYENAKS-----ILKHLSQMGVGSKSVFGALMNTYPLCKS 96

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N    +++I+ Y +EG +  A +  R M   GF+P   T N L+    K   +   +   
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M  + +  +  T N +++ LC E KL +A  LL    + GY    V+Y T++  Y + 
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +   AL+L D+M  + I     TYN ++  L ++ ++ +   +L ++ +  + P+E T+
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N+II+GF  EG++  A +   +M   +  P+ VT N L+ G C +G  E+AL        
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   + V+Y+ L++ LC+  + E +  +L  M    +      Y A+   L  +G L E
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           + K    M++ G +                 P  +++S  IN  C  G+ K+  +I  + 
Sbjct: 397 SVKLLDKMLKDGVV-----------------PDVVTFSVLINGFCRVGKIKNVKEIICKM 439

Query: 509 RQKGIAINKSTYMNLM 524
            + G+A N   Y  L+
Sbjct: 440 YKAGLAPNSIIYTTLI 455



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 1/284 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD +T ++++    K   L+    LL  M   G+  ++ T+N+L+  YC+   + +A
Sbjct: 760  GIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKA 819

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +V++M      PD+ T++ +I+       ++E+  L  EM     +PD   Y  L+NR
Sbjct: 820  FDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNR 879

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                G    AFKL DE++  GI    V  + +++   K GK+++A  ++  M      P 
Sbjct: 880  MCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPT 939

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+ TL+   C+  ++ EA ++ D M    +K++ I  N ++  LC +  +  A  L  
Sbjct: 940  IATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYK 999

Query: 245  SASKRGYYLDEVSYGTLITGYF-RDEKANRALKLWDEMKERQIM 287
               +RG + +  +Y  LI   F  D    +   L  +++ER ++
Sbjct: 1000 EIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGVI 1043



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 12/200 (6%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  F   PD  T+++I+  L +   + E   LL +M ++G +P+R  Y  LV+  C++G 
Sbjct: 826  MNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGH 885

Query: 61   LKEAMRVVDLM-TQNKSLPDVWTYNMLINGWCNAGMLEEA-----FRLRKEMESLKLLPD 114
            +  A ++ D M     S  DV   + L+ G    G +EEA     F LRK      L+P 
Sbjct: 886  IHGAFKLKDEMEALGISSGDV-AESALVRGLAKCGKVEEAKLVLDFMLRKS-----LIPT 939

Query: 115  VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
            + T+ TL++ F  +   +EA KL D +D   +K + + +N++I   C +G +  A K+ +
Sbjct: 940  IATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYK 999

Query: 175  NMEENGFSPDCVTYNTLIDA 194
             +++ G  P+  TY  LIDA
Sbjct: 1000 EIKQRGLWPNMTTYCILIDA 1019



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G    +V  + ++  L K GK+ E + +L  M ++ L+P   T+  L+  +C+   
Sbjct: 896  MEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNES 955

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA+++ D M       DV  YN+LI+G C  G +  A +L KE++   L P++ TY  
Sbjct: 956  LVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCI 1015

Query: 121  LINRFFESGRSMEAFK-LIDELDEHGI 146
            LI+  F +  S+   + L+ +L E G+
Sbjct: 1016 LIDAIFTNDISLAKGEVLLKDLQERGV 1042


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 256/485 (52%), Gaps = 19/485 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VT+  ++    K G+     + L  + +  + P+   +N L+ G  K G   +A
Sbjct: 57  GCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQA 116

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
           +++ + M  ++  PD++TYN +I+G C +G LE+A  L +EM     K  PD+VTYNTLI
Sbjct: 117 VKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLI 176

Query: 123 NR-FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           N    + G   EA +++D +   G  P+ +T+N +I   C  G++ +A +I++ M     
Sbjct: 177 NAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---C 233

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SPD VT+NTL+D  CKAG +  A  +++ M R+ +  + IT   +++ LC   ++  A+ 
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 293

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM---------PSTFT 292
           LL    ++GY  D ++Y +L+ G  +  +   A KL  EM  R+I+         P  FT
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN ++ GL + G   +A+ ++++L+  G +PD  T+NT+I G C   +V +A    ++M 
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                P+ VT   ++ GLCR G ++ A         K  A + V Y +LI  LCK  R++
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           DA  +L  M  + +  D + Y  +  +++  GR+ EA      MV  G +       +TS
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP----DGSTS 529

Query: 473 KTPEE 477
           KT EE
Sbjct: 530 KTLEE 534



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 236/497 (47%), Gaps = 67/497 (13%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           DV +YN L++    +G      ++ K++      P++VT+  LI    ++G++  A + +
Sbjct: 26  DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFL 85

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
             LDE  + P+    N +I    K+G  D+A K+  NME +  +PD  TYNT+I   CK+
Sbjct: 86  RALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKS 145

Query: 199 GNMEEAFRMMDVMGRKGLKM--------------------------------------NT 220
           GN+E+A  +++ M R+G K                                       + 
Sbjct: 146 GNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDV 205

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           IT N+I+H LC   ++ EA  +L + S      D V++ TL+ G+ +     RAL++ +E
Sbjct: 206 ITYNSIIHALCVAGRVVEAAEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRALEVLEE 262

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M    I+P   TY  ++ GL + G+ + A  +L E+++ G IPD   + +++ G C  G+
Sbjct: 263 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 322

Query: 341 VEKALQFHN---------KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +E+A +            +MV  +  P + T NI+L GL ++G + KA+      + +G 
Sbjct: 323 IEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 382

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VTYNTLI  LCK  R+ +A  L  EM      P+  T  ++   L   GR+++A  
Sbjct: 383 VPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAW- 441

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             S++VE  +  H               P+ + Y+  I+  C   R  DA  + +  R +
Sbjct: 442 --SLVVEMSRKRHA--------------PNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQ 485

Query: 512 GIAINKSTYMNLMNGLI 528
           G+A++   Y  L+  +I
Sbjct: 486 GVALDDFAYRKLIVSMI 502



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 192/409 (46%), Gaps = 15/409 (3%)

Query: 128 SGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           S R   A +  D   E  G K +  ++N ++    K G   +  K+ +++  +G SP+ V
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLV 63

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+  LI  NCKAG    A   +  +    +  +    N ++H L  +   D+A  L  + 
Sbjct: 64  TFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM 123

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER--QIMPSTFTYNAMI-WGLSQS 303
                  D  +Y T+I+G  +     +A +L +EM  R  +  P   TYN +I  G+ + 
Sbjct: 124 ESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKD 183

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+A+++L+ +  +G  PD  T+N+IIH  C  G+V +A +    M   S  PD+VT 
Sbjct: 184 GDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTF 240

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N LL G C+ G+L +AL+       +    D +TY  L++ LC+  +++ AF LL E+  
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +   PD   Y ++   L +SG +EEA K    M    +I  ++V  N         P   
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM-SAREILAEMVSINMV-------PPLF 352

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +Y+  +      G    A+ +  +   +G   +  TY  L++GL K  +
Sbjct: 353 TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANR 401



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P   TYN +L  L K G +++   L+SD+  +G VP+  TYN L+ G CK   ++EA  
Sbjct: 348 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 407

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M      P+  T   ++ G C  G +++A+ L  EM   +  P+VV Y +LI+   
Sbjct: 408 LADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 467

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +S R  +A  ++D +   G+  +   +  +I      G++ +A  +   M   GF PD  
Sbjct: 468 KSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGS 527

Query: 187 TYNTLIDA 194
           T  TL +A
Sbjct: 528 TSKTLEEA 535


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 229/436 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T   ++++L    +++     L+ + K G  P+ TT+  L+ G C  G 
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      P+V TY  LING C  G    A RL + ME     P+VV ++T
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +  +  EAF +  E+   GI PN VT+N +I   CK  +      ++  M ++ 
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T NT++DA CK G + EA  ++D+M  +G++ N +T N ++   C   ++D A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++   +    + +SY TLI GY + +  ++A+ L++EM  +++ P+T TYN +I GL
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G IPD  T+ T+    C    ++KA+     +   ++ PDI
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                +L G+CR G LE A   F +   KG   +  TYN +I  LCK+  L +A  L SE
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 421 MEEKKLGPDRYTYAAI 436
           M +    P+  TY  I
Sbjct: 516 MNKNGCSPNDCTYNLI 531



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 245/525 (46%), Gaps = 21/525 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++NT          L+E     + M  +   P+   +N L++   K       + +   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PDV+T  ++IN  C+   ++ AF    ++  L   PD  T+ TLI      G+ 
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L D++   G +PN VT+  +I   CK G    A +++R+ME+    P+ V ++TL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKKLDEAYMLLNSASKR 249
           ID+ CK   + EAF +   M  KG+  N +T N+++H LC  CE K      L+N     
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK--HVTTLMNEMVDS 274

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               D  +  T++    ++     A  + D M  R + P+  TYNA++ G     + + A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           + + + ++    + +  ++NT+I+G+C    V+KA+    +M  +   P+ VT N L+ G
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC  G L+ A+  F   + +G+  D VTY TL   LCK R L+ A  LL  +E     PD
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
              Y  I   +  +G LE+A+   S +   G      +QPN             +Y+  I
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKG------LQPNV-----------WTYNIMI 497

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           +  C QG   +A ++F E  + G + N  TY  +  G ++  +++
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 226/453 (49%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +N +L ++ K    + +  L   M   G+ P+  T  I+++  C L  +  A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+  LI G C  G + EA  L  +M      P+VVTY TLIN   +
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A +L+  +++   +PN V  + +I   CK+ ++ +A  I   M   G SP+ VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI   CK    +    +M+ M    +  +  TLNT++  LC E  + EA+ +++   
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   + V+Y  L+ G+    + + A+K++D M  +  + +  +YN +I G  +    +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+ +  + P+  T+NT+IHG C  G+++ A+   ++MV +   PD+VT   L 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L+KA+   ++        D   Y T++  +C+   LEDA  L S +  K L 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           P+ +TY  +   L + G L EA K  S M + G
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 221/448 (49%), Gaps = 1/448 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ E   L   M  +G  PN  TY  L++G CK+G    
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    P+V  ++ LI+  C    + EAF +  EM +  + P++VTYN+LI+
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +         L++E+ +  I P+  T N ++   CKEG + +A  +V  M   G  P
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN L+D +C    ++ A ++ D M  K    N I+ NT+++  C  + +D+A  L 
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S++    + V+Y TLI G     +   A+ L+ EM  R  +P   TY  +   L ++
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A+ +L  +  S   PD   + TI+ G C  G++E A    + +  K  +P++ T 
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ GLC++G+L +A K F      G + +  TYN +     +         LL EM  
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK 451
           +    D  T   +   L + G L+++ K
Sbjct: 554 RGFSVDVSTTTLLVGMLSDDG-LDQSVK 580



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 204/405 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY T+++ L K G  +    LL  M++    PN   ++ L+   CK   
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +   M      P++ TYN LI+G C     +    L  EM   K++PDV T NT
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G   EA  ++D +   G++PN VT+N ++  +C   ++D A K+   M    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + ++YNTLI+  CK  ++++A  + + M R+ L  NT+T NT++H LC   +L +A 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    RG   D V+Y TL     ++   ++A+ L   ++     P    Y  ++ G+
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ E A D+ + L   G+ P+  T+N +IHG C +G + +A +  ++M +    P+ 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            T N++  G  R     + ++     + +G +VD  T   L+  L
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 570



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 198/381 (51%), Gaps = 1/381 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+ V ++T++D+L K  ++ E  ++ S+M  +G+ PN  TYN L+ G CKL  
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K    +++ M  +K +PDV+T N +++  C  GM+ EA  +   M    + P+VVTYN 
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++          A K+ D +       N +++N +I  YCK   +DKA  +   M    
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTYNTLI   C  G +++A  +   M  +G   + +T  T+   LC  + LD+A 
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 440

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +     +  D   Y T++ G  R  +   A  L+  +  + + P+ +TYN MI GL
Sbjct: 441 ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 500

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A  + +E+ ++G  P++ T+N I  GF    +  + ++   +M+ + F  D+
Sbjct: 501 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560

Query: 361 VTCNILLSGLCREGILEKALK 381
            T  +L+  L  +G L++++K
Sbjct: 561 STTTLLVGMLSDDG-LDQSVK 580



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 169/312 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  T NT++DAL K+G + E  D++  M  +G+ PN  TYN L+ G+C    +  A++
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M     + +V +YN LING+C    +++A  L +EM   +L P+ VTYNTLI+   
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L  E+   G  P+ VT+  +  + CK   +DKA  +++ +E + + PD  
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y T++D  C+AG +E+A  +   +  KGL+ N  T N ++H LC +  L EA  L +  
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           +K G   ++ +Y  +  G+ R+ +A R ++L +EM  R       T   ++  LS  G  
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLD 576

Query: 307 EQAIDMLNELLQ 318
           +    +L + +Q
Sbjct: 577 QSVKQILCKYVQ 588


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 285/581 (49%), Gaps = 54/581 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T   +L +L K  +L +   +   M+ QG+ P+   ++  ++ +CK G +++A
Sbjct: 274 GVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDA 332

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++   M +    P+V TYN LI+G C  G L+EAFR +++M    +   ++TY+ LIN 
Sbjct: 333 IQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLING 392

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  +  EA  ++ E  E G  PN V +N +I  YCK G +  A +I  +M   G +P+
Sbjct: 393 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 452

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT N++I   CK G ME+A  +++ M  +G  +N     TI+H LC   + + A   L 
Sbjct: 453 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 512

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R    ++    TL+ G  ++ K + A++LW  + E+    +  T NA+I GL ++G
Sbjct: 513 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 572

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ +L ++L+ G + D+ T+NT+I G C EG+VE+  +   +MV++  +PD  T N
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 632

Query: 365 ILLSGLCREGILEKAL-----------------------------------KFFRSWILK 389
           +L+ G+CR G L++A+                                   K F   + +
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
              ++SV YNTLI + C+     +AF L  +M  K + P   TY+++   +   GR+E+A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752

Query: 450 QKFTSIMVETGKINH------------------QVVQPNTSKTPEEIDPSSISYSEKINE 491
           +     M + G + +                  +VV      +  +I P+ I+Y+  I+ 
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 812

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +   G  K A ++  E   KGI  +  TY  L NG  K  K
Sbjct: 813 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 853



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 246/511 (48%), Gaps = 21/511 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           +TY+ +++ L K  K NE   +L +  ++G  PN   YN L+ GYCK+G L +A+R+   
Sbjct: 384 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 443

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P+  T N +I G+C  G +E+A  + +EM S     +   + T+I+    + R
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A + + E+    ++PN      ++   CKEGK   A ++   + E GF  + VT N 
Sbjct: 504 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 563

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   CK GNM+EA R++  M  +G  ++ IT NT++   C E K++E + L     K+G
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  +Y  LI G  R  K + A+ LW+E K R ++P+ +TY  MI G  ++ K E+  
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  ELL   +  +   +NT+I  +C  G   +A + H+ M  K   P   T + L+ G+
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C  G +E A         +G   + V Y  LI   CK  +++    +L EM    + P++
Sbjct: 744 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 803

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  +     +SG ++ A K    MV  G                 I P +++Y+   N
Sbjct: 804 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKG-----------------IVPDTVTYNVLTN 846

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
             C +G+ ++   + E+    G+  N   ++
Sbjct: 847 GFCKEGKIEEGKLLAED----GVGFNSPLFL 873



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 228/446 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V YNT++D   K G L +   +  DM  +G+ PN  T N ++ G+CK+G +++A
Sbjct: 413 GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQA 472

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M       +   +  +I+  C     E A R  +EM    + P+     TL+  
Sbjct: 473 ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 532

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +A +L   L E G   N VT N +I   CK G + +A ++++ M E GF  D
Sbjct: 533 LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 592

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTLI   CK G +EE F++   M ++G++ +T T N ++H +C   KLDEA  L N
Sbjct: 593 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 652

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R    +  +YG +I GY + +K     KL+ E+  + +  ++  YN +I    ++G
Sbjct: 653 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 712

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T +A  + +++   G+ P   T++++IHG C+ G++E A    ++M ++   P++V   
Sbjct: 713 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 772

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C+ G ++K +   +         + +TY  +I    K   ++ A  LL EM  K
Sbjct: 773 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQ 450
            + PD  TY  +     + G++EE +
Sbjct: 833 GIVPDTVTYNVLTNGFCKEGKIEEGK 858



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 1/140 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   TY++++  +   G++ + + L+ +M+K+GL+PN   Y  L+ GYCKLG 
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + + + V+  M+     P+  TY ++I+G+  +G ++ A +L  EM    ++PD VTYN 
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843

Query: 121 LINRFFESGRSMEAFKLIDE 140
           L N F + G+ +E  KL+ E
Sbjct: 844 LTNGFCKEGK-IEEGKLLAE 862



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 23/224 (10%)

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ---VEKALQFHNKMVEKSFKPDIVTCNI 365
           A+  LNE+ +SG+       + +IH +C++ +      A+     +  K   P + TC  
Sbjct: 227 AMADLNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTF 284

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LLS L +   LEK+   F + + +G + D   ++T I++ CK  ++EDA  L  +ME+  
Sbjct: 285 LLSSLVKANELEKSYWVFET-MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG 343

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P+  TY  +   L + G L+EA +F   MV+ G                 ++ + I+Y
Sbjct: 344 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG-----------------VNATLITY 386

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           S  IN      ++ +A  + +ET +KG   N+  Y  L++G  K
Sbjct: 387 SVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK 430


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 229/436 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T   ++++L    +++     L+ + K G  P+ TT+  L+ G C  G 
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      P+V TY  LING C  G    A RL + ME     P+VV ++T
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +  +  EAF +  E+   GI PN VT+N +I   CK  +      ++  M ++ 
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T NT++DA CK G + EA  ++D+M  +G++ N +T N ++   C   ++D A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++   +    + +SY TLI GY + +  ++A+ L++EM  +++ P+T TYN +I GL
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G IPD  T+ T+    C    ++KA+     +   ++ PDI
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                +L G+CR G LE A   F +   KG   +  TYN +I  LCK+  L +A  L SE
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 421 MEEKKLGPDRYTYAAI 436
           M +    P+  TY  I
Sbjct: 516 MNKNGCSPNDCTYNLI 531



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 245/525 (46%), Gaps = 21/525 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++NT          L+E     + M  +   P+   +N L++   K       + +   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PDV+T  ++IN  C+   ++ AF    ++  L   PD  T+ TLI      G+ 
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L D++   G +PN VT+  +I   CK G    A +++R+ME+    P+ V ++TL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKKLDEAYMLLNSASKR 249
           ID+ CK   + EAF +   M  KG+  N +T N+++H LC  CE K      L+N     
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK--HVTTLMNEMVDS 274

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               D  +  T++    ++     A  + D M  R + P+  TYNA++ G     + + A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           + + + ++    + +  ++NT+I+G+C    V+KA+    +M  +   P+ VT N L+ G
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC  G L+ A+  F   + +G+  D VTY TL   LCK R L+ A  LL  +E     PD
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
              Y  I   +  +G LE+A+   S +   G      +QPN             +Y+  I
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKG------LQPNV-----------WTYNIMI 497

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           +  C QG   +A ++F E  + G + N  TY  +  G ++  +++
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 226/453 (49%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +N +L ++ K    + +  L   M   G+ P+  T  I+++  C L  +  A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+  LI G C  G + EA  L  +M      P+VVTY TLIN   +
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A +L+  +++   +PN V  + +I   CK+ ++ +A  I   M   G SP+ VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI   CK    +    +M+ M    +  +  TLNT++  LC E  + EA+ +++   
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   + V+Y  L+ G+    + + A+K++D M  +  + +  +YN +I G  +    +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+ +  + P+  T+NT+IHG C  G+++ A+   ++MV +   PD+VT   L 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L+KA+   ++        D   Y T++  +C+   LEDA  L S +  K L 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           P+ +TY  +   L + G L EA K  S M + G
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 216/441 (48%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ E   L   M  +G  PN  TY  L++G CK+G    
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    P+V  ++ LI+  C    + EAF +  EM +  + P++VTYN+LI+
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +         L++E+ +  I P+  T N ++   CKEG + +A  +V  M   G  P
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN L+D +C    ++ A ++ D M  K    N I+ NT+++  C  + +D+A  L 
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S++    + V+Y TLI G     +   A+ L+ EM  R  +P   TY  +   L ++
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A+ +L  +  S   PD   + TI+ G C  G++E A    + +  K  +P++ T 
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ GLC++G+L +A K F      G + +  TYN +     +         LL EM  
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 424 KKLGPDRYTYAAIHTALVESG 444
           +    D  T   +   L + G
Sbjct: 554 RGFSVDVSTTTLLVGMLSDDG 574



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 204/405 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY T+++ L K G  +    LL  M++    PN   ++ L+   CK   
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +   M      P++ TYN LI+G C     +    L  EM   K++PDV T NT
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G   EA  ++D +   G++PN VT+N ++  +C   ++D A K+   M    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + ++YNTLI+  CK  ++++A  + + M R+ L  NT+T NT++H LC   +L +A 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    RG   D V+Y TL     ++   ++A+ L   ++     P    Y  ++ G+
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ E A D+ + L   G+ P+  T+N +IHG C +G + +A +  ++M +    P+ 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            T N++  G  R     + ++     + +G +VD  T   L+  L
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 570



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 36/381 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+ V ++T++D+L K  ++ E  ++ S+M  +G+ PN  TYN L+ G CKL  
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN- 119
            K    +++ M  +K +PDV+T N +++  C  GM+ EA  +   M    + P+VVTYN 
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320

Query: 120 ----------------------------------TLINRFFESGRSMEAFKLIDELDEHG 145
                                             TLIN + +     +A  L +E+    
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN VT+N +I   C  G++  A  +   M   G  PD VTY TL D  CK  ++++A 
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 440

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  +       +     TIL  +C   +L++A  L ++ S +G   +  +Y  +I G 
Sbjct: 441 ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 500

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +      A KL+ EM +    P+  TYN +  G  ++ +  + I++L E+L  G   D 
Sbjct: 501 CKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV 560

Query: 326 TTFNTIIHGFCSEGQVEKALQ 346
           +T  T++ G  S+  ++++++
Sbjct: 561 ST-TTLLVGMLSDDGLDQSVK 580


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 279/543 (51%), Gaps = 18/543 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D V YN+++   F  G  +   +++  MK  G+ PN  TY  L+  YCK   + EA
Sbjct: 217 GVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEA 276

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M ++  LPDV T + L++G C  G   EA+ L +EM+ + + P+ VTY TLI+ 
Sbjct: 277 FSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDS 336

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++ R  E+  L+ E+   G+  + V +  ++    KEGKI++A  ++R+ + +  +P+
Sbjct: 337 LAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPN 396

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  L+DA+C+AGN++ A +++  M  K +  N +T ++I++ L     L +A   + 
Sbjct: 397 FVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMR 456

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + V+YGTLI G+F+ +    AL ++ +M    +  + F  ++++ GL ++G
Sbjct: 457 KMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNG 516

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E A  +  ++ + G++ D   + T++ G    G +  A +   +++EK+  PD V  N
Sbjct: 517 NIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYN 576

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           + ++ LC  G   +A  F +     G   D  TYNT+I++ C+E +   A  LL EM+  
Sbjct: 577 VFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQ-VVQP-NTSKTPEEI 478
            + P+  TY  +   L+E+G +++A+   + M   G     + HQ V+Q  + S+ P+ I
Sbjct: 637 SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVI 696

Query: 479 ------------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                             Y+  ++  C  G  ++A  + +E   +GIA +  T+  L+ G
Sbjct: 697 LEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILG 756

Query: 527 LIK 529
             K
Sbjct: 757 HCK 759



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 266/548 (48%), Gaps = 18/548 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + D V Y  ++D L K+GK+ E +D+L   +   + PN  TY +LV  +C+ G +  A
Sbjct: 357 GVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGA 416

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+  M +   +P+V T++ +ING    G L +A    ++M+   + P+VVTY TLI+ 
Sbjct: 417 EQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDG 476

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+      A  +  ++   G++ N    + ++    K G I+ A  + ++M+E G   D
Sbjct: 477 FFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLD 536

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TL+D   K GNM  AF++   +  K L  + +  N  ++ LC   K  EA   L 
Sbjct: 537 HVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLK 596

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y T+I    R+ K ++ALKL  EMK   I P+  TY  ++ GL ++G
Sbjct: 597 EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAG 656

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  +LNE+  +G  P   T   ++       + +  L+ H  M+      DI   N
Sbjct: 657 VVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYN 716

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC  G+   A       + +G A D++T+N LI   CK   L++AF + ++M  +
Sbjct: 717 TLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIM----VETGKINHQVVQPNTSKTPEEID- 479
            L P+  T+  +   L  +GR+ EA    S M    +E   + + ++    +K   +++ 
Sbjct: 777 GLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEA 836

Query: 480 -------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                        P + +Y+  +++    G    A ++F E +++G+    STY  L+NG
Sbjct: 837 LRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 896

Query: 527 LIKRRKSI 534
             K R  I
Sbjct: 897 WSKLRNGI 904



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 264/558 (47%), Gaps = 54/558 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V+YN  L AL ++G       +LS+M K+G+  +  T +  + G C+ G + EA  + 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 69  DLMTQNKSLP--DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +++ + + +   DV  +N LI+G+C    +  A  + + M +  +  DVV YN+L+  FF
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            SG +  A ++++ +   G++PN VT+  +I  YCK   +D+A  +   M  +G  PD V
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVV 293

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T + L+D  C+ G   EA+ +   M + G+  N +T  T++ +L   ++  E+  LL   
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 247 SKRGYYLDE-----------------------------------VSYGTLITGYFRDEKA 271
             RG  +D                                    V+Y  L+  + R    
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A ++  +M+E+ ++P+  T++++I GL + G   +A D + ++  SG+ P+  T+ T+
Sbjct: 414 DGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTL 473

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I GF      E AL  +  M+ +  + +    + L++GL + G +E A   F+    +G 
Sbjct: 474 IDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGL 533

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            +D V Y TL+  L K   +  AF +  E+ EK L PD   Y      L   G+  EA+ 
Sbjct: 534 LLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKS 593

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
           F   M  TG                 ++P   +Y+  I   C +G+   AL++ +E ++ 
Sbjct: 594 FLKEMRNTG-----------------LEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636

Query: 512 GIAINKSTYMNLMNGLIK 529
            I  N  TY  L+ GL++
Sbjct: 637 SIKPNLITYTTLVVGLLE 654



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 225/463 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME    +P+ VT+++I++ L K+G L +  D +  MK  G+ PN  TY  L+ G+ K   
Sbjct: 423 MEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQG 482

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+ V   M       + +  + L+NG    G +E A  L K+M+   LL D V Y T
Sbjct: 483 QEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTT 542

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  F++G    AFK+  EL E  + P+AV +N+ I   C  GK  +A   ++ M   G
Sbjct: 543 LMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG 602

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYNT+I A C+ G   +A +++  M R  +K N IT  T++  L     + +A 
Sbjct: 603 LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAK 662

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN  +  G+    +++  ++       + +  L++ + M    +      YN ++  L
Sbjct: 663 FLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVL 722

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G    A  +L+E+L  G+ PD  TFN +I G C    ++ A   + +M+ +   P+I
Sbjct: 723 CCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNI 782

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N LL GL   G + +A          G   +++TY+ L++   K+    +A  L  E
Sbjct: 783 ATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCE 842

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           M  K   P   TY ++ +   ++G + +A++  S M   G ++
Sbjct: 843 MVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLH 885



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 226/449 (50%), Gaps = 2/449 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   +N   +++++ L K G +     L  DM ++GL+ +   Y  L+ G  K G +  A
Sbjct: 497 GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAA 556

Query: 65  MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            +V  +LM +N S PD   YN+ IN  C  G   EA    KEM +  L PD  TYNT+I 
Sbjct: 557 FKVGQELMEKNLS-PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIA 615

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G++ +A KL+ E+  + IKPN +T+  ++    + G + KA  ++  M   GF+P
Sbjct: 616 ARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAP 675

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             +T+  ++ A   +   +    + ++M   GL  +    NT++H LCC      A ++L
Sbjct: 676 TSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVL 735

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    RG   D +++  LI G+ +    + A  ++ +M  + + P+  T+N ++ GL  +
Sbjct: 736 DEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESA 795

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A  +L+++ + G+ P+  T++ ++ G+  +    +AL+ + +MV K F P   T 
Sbjct: 796 GRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+S   + G++ +A + F     +G    S TY+ L++   K R   +   LL +M+E
Sbjct: 856 NSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
               P + T +++  A    G   EA++ 
Sbjct: 916 LGFKPSKGTISSMSRAFSRPGMTGEARRL 944



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 196/420 (46%), Gaps = 35/420 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G L D+V Y T++D LFK G +     +  ++ ++ L P+   YN+ ++  C LG 
Sbjct: 528 MDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGK 587

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA   +  M      PD  TYN +I   C  G   +A +L KEM+   + P+++TY T
Sbjct: 588 FSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTT 647

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTH--------------------------- 153
           L+    E+G   +A  L++E+   G  P ++TH                           
Sbjct: 648 LVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAG 707

Query: 154 --------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                   N ++   C  G    A  ++  M   G +PD +T+N LI  +CK+ +++ AF
Sbjct: 708 LHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAF 767

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +   M  +GL  N  T NT+L  L    ++ EA  +L+   K G   + ++Y  L+TGY
Sbjct: 768 AIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +      AL+L+ EM  +  +P   TYN+++   +++G   QA ++ +E+ + G++   
Sbjct: 828 AKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTS 887

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           +T++ +++G+       +       M E  FKP   T + +     R G+  +A +  ++
Sbjct: 888 STYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKT 947



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 35/353 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT++ A  ++GK ++   LL +MK+  + PN  TY  LV G  + G 
Sbjct: 598 MRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGV 657

Query: 61  LKEAMRVVDLMTQNKSLP-----------------------------------DVWTYNM 85
           +K+A  +++ M      P                                   D+  YN 
Sbjct: 658 VKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNT 717

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L++  C  GM   A  +  EM +  + PD +T+N LI    +S     AF +  ++   G
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG 777

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN  T N ++      G+I +A  ++ +M++ G  P+ +TY+ L+    K  N  EA 
Sbjct: 778 LSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEAL 837

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R+   M  KG      T N+++        +++A  L +   +RG      +Y  L+ G+
Sbjct: 838 RLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 897

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            +         L  +MKE    PS  T ++M    S+ G T +A  +L  L +
Sbjct: 898 SKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 157/397 (39%), Gaps = 94/397 (23%)

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSAS------------------------------- 247
           +T+TLN+I+ + C  + L  A  LL S+S                               
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 248 --------KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS--TFTYNAMI 297
                   KRG   D V+  T + G  R      A  L + +   + +       +NA+I
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ----------- 346
            G  +      A+ ++  +   G+  D   +N+++ GF   G  + AL+           
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 347 ------------------------FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
                                    +  MV     PD+VT + L+ GLCR+G   +A   
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYAL 314

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           FR     G A + VTY TLI SL K RR  ++ GLL EM  + +  D   Y A+   L +
Sbjct: 315 FREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGK 374

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++EEA+           + H           + I P+ ++Y+  ++ HC  G    A 
Sbjct: 375 EGKIEEAKDV---------LRHA--------QSDNITPNFVTYTVLVDAHCRAGNIDGAE 417

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           Q+  +  +K +  N  T+ +++NGL+K R  + KA D
Sbjct: 418 QVLLQMEEKSVIPNVVTFSSIINGLVK-RGCLGKAAD 453



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 22/179 (12%)

Query: 356 FKP---DIVTCNILLSGLCREGILEKALKFFRSWILKGK----AVDSVTYNTLISSLCKE 408
           F+P   D +T N ++   C    L  AL   RS          A D+V+YN  +++L ++
Sbjct: 69  FRPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQ 128

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
                A  +LSEM ++ +  D  T +     L  +G + EA     ++V    I+   V 
Sbjct: 129 GHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDV- 187

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                         + ++  I+ +C       AL + E    +G+A++   Y +L+ G 
Sbjct: 188 --------------VGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGF 232


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 233/461 (50%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD VT +T++D L K G++     +   M+ +GL PN   Y+ L+ G CK   
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M +    PD  TYN+LI+G C +G +E A     EM      PDV TYN 
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236

Query: 121 LINRFFESGRSMEA-FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LI+ F ++G +  A   L  E   +G   +  T+  ++ W  K  KI++A  ++  +  N
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +P   TYN L++  CK G +EEA  ++  +   G   + +T  +++  L  EK+  EA
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           Y L    + RG  LD V Y  LI    +  K  +A  ++  M     +P   T + MI G
Sbjct: 357 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 416

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS++G+   A+ +   +   G+ P+E  ++ +IHG C   +++ AL+   +M +    PD
Sbjct: 417 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 476

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +T NIL+ GLC+ G +E A  FF   +  G   D  TYN LIS  CK    + A G+  
Sbjct: 477 TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 536

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M   +   +  TY A+ + L +  +L +A  +   M E G
Sbjct: 537 DMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 264/564 (46%), Gaps = 53/564 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P   TYN +L+ L K G+L E  DLL  +   G  P+  TY  L+ G  K     EA
Sbjct: 16  GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 75

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   M       D   Y  LI      G + +A  + K M S   +PDVVT +T+I+ 
Sbjct: 76  YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 135

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR   A ++   ++  G+ PN V ++ +I   CK  K+D A +++  M++   +PD
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 195

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-YMLL 243
            +TYN LID  CK+G++E A    D M   G K +  T N ++   C     D A + L 
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              +  G  +D  +Y  ++    +++K   A+ L +++      P+  TYNA++ GL + 
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE------------------------- 338
           G+ E+AID+L +++ +G  PD  T+ ++I G   E                         
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375

Query: 339 ----------GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
                     G++ +A   +  M      PD+VT + ++ GL + G +  A++ F+S   
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 435

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G A + V Y+ LI  LCK R+++ A  +L++M++    PD  TY  +   L +SG +E 
Sbjct: 436 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 495

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A+ F   M+E G                   P   +Y+  I+  C  G    A  +F++ 
Sbjct: 496 ARAFFDEMLEAG-----------------CKPDVYTYNILISGFCKAGNTDAACGVFDDM 538

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
                + N  TY  L++GL KRR+
Sbjct: 539 SSSRCSANVVTYGALISGLCKRRQ 562



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 235/473 (49%), Gaps = 18/473 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+ +++ +T N   P + TYN L+NG C  G LEEA  L +++      PDVVTY +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +  RS EA+KL  E+   G+  + V +  +I+   + GKI +A  + + M  +G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT +T+ID   KAG +  A R+   M  +GL  N +  + ++H LC  +K+D A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K     D ++Y  LI G  +      A   +DEM E    P  +TYN +I G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 301 SQSGKTEQAIDML-NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            ++G T+ A   L  E   +G   D  T+  I+       ++E+A+    K+      P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I T N LL+GLC+ G LE+A+   R  +  G   D VTY +LI  L KE+R  +A+ L  
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  + L  D   Y A+   L+++G++ +A      M   G +                 
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV----------------- 404

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P  ++ S  I+     GR   A++IF+    +G+A N+  Y  L++GL K RK
Sbjct: 405 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 457



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 176/370 (47%), Gaps = 18/370 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           KI++A  ++  +  NG +P   TYN L++  CK G +EEA  ++  +   G   + +T  
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
           +++  L  EK+  EAY L    + RG  LD V Y  LI    +  K  +A  ++  M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
             +P   T + MI GLS++G+   A+ +   +   G+ P+E  ++ +IHG C   +++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L+   +M +    PD +T N+L+ GLC+ G +E A  FF   +  G   D  TYN LIS 
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 405 LCKERRLEDA-FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            CK    + A   L  E        D +TY AI   L ++ ++EEA      +   G   
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG--- 297

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                           P+  +Y+  +N  C  GR ++A+ +  +    G   +  TY +L
Sbjct: 298 --------------CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 343

Query: 524 MNGLIKRRKS 533
           ++GL K ++S
Sbjct: 344 IDGLGKEKRS 353


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 262/564 (46%), Gaps = 54/564 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD   +  ++  L K  ++ E R++   M+K G  P+   YN ++ G  K G  +EA++V
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M     +P   TY +L+N  C AG LE A  L + M +    P+ V Y +LI+ F +
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR  EA  L DE+ E G +P+ +TH +MI   CK G  ++A K    M   G  P+ VT
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+I    K G +  AFR+M  M   G   +++T   +L   C   +LDEA  LL+   
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462

Query: 248 KRGYYLDEVSYGTLITG-------------YFRDEKA----------------------- 271
           K     +   Y +L+ G              F   KA                       
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRL 522

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQS--GKTEQAIDMLNELLQSGMIPDETTFN 329
           + A +++  M      P   TYN +I GL +S   + E+A  +L++L   G +PD  T+ 
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYT 582

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +  G C  G+V++A++   +   + +  D+V    L +GLC +G +++A+  F+  + +
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G A D+  Y  +I+ L K ++LEDA     EM  K   P   TY A+  AL  +G ++EA
Sbjct: 643 GGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 M+  G                E+  S + Y   I+  C   +   AL++FE+  
Sbjct: 703 FHRFEGMLARG----------------ELVGSVMIYDALIHGFCKALKVDAALKLFEDMI 746

Query: 510 QKGIAINKSTYMNLMNGLIKRRKS 533
            +G      T  +L +GL++  K+
Sbjct: 747 SRGNVPTAVTSASLFDGLVRSGKT 770



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 243/499 (48%), Gaps = 39/499 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C+P  VTY  ++++L K G L    +L   M   G  PN   Y  L+ G+ K G +KEA
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M +    PDV T+ ++I+G C +G  E+A +  +EM      P+VVTY T+I  
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR   AF+++  +  HG  P++VT+  ++  +CK G++D+A +++  +++   SP+
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469

Query: 185 CVTYNTLIDANC------------------------------------KAGNMEEAFRMM 208
              Y++L+   C                                    K G ++EA R+ 
Sbjct: 470 LQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIF 529

Query: 209 DVMGRKGLKMNTITLNTILHTLCC--EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             M  +G K +  T N +++ LC   E +++ A+ LL+     GY  D V+Y  L  G  
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLC 589

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  + +RA+K+ +E   R        Y A+  GL   G+ ++A+ +  E+++ G  PD  
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            +  II+G     ++E A +F ++M+ K  KP + T   L+  LC  G +++A   F   
Sbjct: 650 AYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM 709

Query: 387 ILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
           + +G+ V SV  Y+ LI   CK  +++ A  L  +M  +   P   T A++   LV SG+
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGK 769

Query: 446 LEEAQKFTSIMVETGKINH 464
            E+AQ+    M   G   H
Sbjct: 770 TEKAQELLQEMAAGGSPPH 788



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/564 (25%), Positives = 275/564 (48%), Gaps = 58/564 (10%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TYN +++ L  +   ++   +  +M K G+ PN  ++NIL+  + +     +A+   
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLINRFFE 127
           ++M + +  PD+ T+ +L++  C AGM E+AF +  EM ++  + PD   +  ++    +
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  EA ++  ++++ G  P+A+ +N MI    K G   +A K++ NM      P  VT
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+++ CKAG +E A  +  VM   G + N++   +++H      ++ EA  L +   
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + GY  D +++  +I G  +     +A K ++EM      P+  TY  +I GLS+ G+  
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI------- 360
            A  ++  ++  G  PD  T+  ++ GFC  G++++A Q  +++ + S  P++       
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 361 ------------------------------VTCNILLSGLCREGILEKALKFFRSWILKG 390
                                         + C+I++ GLC+ G L++A + F+  + +G
Sbjct: 478 KGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV-GLCKTGRLDEACRIFQRMVSEG 536

Query: 391 KAVDSVTYNTLISSLCKER--RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
              D+ TYN LI+ LC+ R  R+E AF LL ++E     PD  TY  +   L + G ++ 
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A K    M+E               +    +   ++Y+      C QG+   A+ +F+E 
Sbjct: 597 AVK----MLE-------------EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            ++G A + + Y  ++NGLIK +K
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKGKK 663



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 211/423 (49%), Gaps = 7/423 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY TI+  L K G++     ++  M   G  P+  TY  L+ G+CKLG L EA
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEA 454

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR-LRKEMESLKLLPDVVTYNTLIN 123
            +++D + +  S P++  Y+ L+ G C+ G +E     L ++ ++     D     ++I 
Sbjct: 455 AQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV 514

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK--EGKIDKACKIVRNMEENGF 181
              ++GR  EA ++   +   G KP+A T+NI+I   C+  E ++++A  ++ ++E  G+
Sbjct: 515 GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGY 574

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VTY  L    CK G ++ A +M++    +G   + +    +   LC + ++D A  
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L     ++G   D  +Y  +I G  + +K   A K +DEM  +   P+  TY A++  L 
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694

Query: 302 QSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +G  ++A      +L  G ++     ++ +IHGFC   +V+ AL+    M+ +   P  
Sbjct: 695 HAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L  GL R G  EKA +  +     G    + T+  ++  L   R+ +++  LL  
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL---RKSDESGKLLKL 811

Query: 421 MEE 423
           ++E
Sbjct: 812 VQE 814



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 53/321 (16%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  + G+  D  +Y  L+     ++  ++   + +EM +  I P+TF++N +I   +++ 
Sbjct: 109 AGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ----------------FH 348
           + + A+     + +    PD  TF  ++   C  G  EKA +                 H
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228

Query: 349 NKMVEK--------------------SFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             MV                       F PD +  N ++ GL + G  ++ALK   + + 
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           K      VTY  L++SLCK   LE A  L   M      P+   Y ++     +SGR++E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      MVE G                   P  I+++  I+  C  G ++ A + FEE 
Sbjct: 349 ACSLFDEMVEAG-----------------YRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
            + G   N  TY  ++ GL K
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSK 412


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/540 (30%), Positives = 273/540 (50%), Gaps = 18/540 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD+ T   +  A  + G++    D L +M++ GL  N   Y+ ++ GYC++G 
Sbjct: 155 MRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQ 214

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
            + A +++  +      P+V TY +L+ G+C  G +EEA ++ KE+ E+ K++ D V Y 
Sbjct: 215 TEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYG 274

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LIN + + GR  +A ++ DE+ + G++ N   +N MI  YCK G++ +  K+++  E  
Sbjct: 275 ALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYR 334

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G + D  +YNTL+D  C+ G M +AF   D+M R G    T+T NT+L+  C    +D+A
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L     KRG   +E+S  TL+ G+F+  K  +AL LW E   R +  +  T N +I G
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++ +  +A ++ + + +     D  T+ T+I G+C  G + +A Q   +M    F P 
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +   N  ++GL       K          KG + ++VTY  LI+  CKE  L DA  L  
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF 574

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEA-------------QKFTSIMVETGKINHQV 466
           EM EK L P+ +  + + +     G+++EA             Q  ++  +  GK+ H +
Sbjct: 575 EMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHII 634

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                S        + I ++  I   C  GR  DA  +FE+ + KG   +  TY +L++G
Sbjct: 635 ----ESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHG 690



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/591 (27%), Positives = 280/591 (47%), Gaps = 79/591 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   + V Y+ ++D   + G+    R LL  ++ +GL PN  TY +LV GYCK G 
Sbjct: 190 MEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGR 249

Query: 61  LKEAMRVVDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           ++EA +VV  + +N K + D   Y  LING+C  G +E+A R+R EM    +  ++  YN
Sbjct: 250 MEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYN 309

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN + + GR  E  KL+   +  G+  +  ++N ++  YC++G + KA +    M  N
Sbjct: 310 TMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRN 369

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG------------------------ 215
           GF+   +TYNTL++  C  G +++A ++  +M ++G                        
Sbjct: 370 GFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQA 429

Query: 216 -----------LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
                      L  N +T+NT+++ LC  +++ EA  L +   +     D ++Y TLI G
Sbjct: 430 LNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDG 489

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           Y +     RA ++  EM+    +PS   +N+ I GL  + ++ +  D+  E+   G+ P+
Sbjct: 490 YCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPN 549

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+  +I G+C EG +  A   + +MVEK  KP++  C++L+S   REG +++A    +
Sbjct: 550 TVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQ 609

Query: 385 -------------SWILKGKAVD-------------SVTYNTLISSLCKERRLEDAFGLL 418
                        S +  GK                 + +N +I  LCK  R+ DA  L 
Sbjct: 610 KLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLF 669

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            +++ K   PD +TY+++      SG ++ A      M+                    +
Sbjct: 670 EDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA-----------------RL 712

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            P+ ++Y+  I   C       A+ +F + + KGI+ N  TY  L++G  K
Sbjct: 713 TPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCK 763



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 252/506 (49%), Gaps = 18/506 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +++ +L A    G+L +   +  +M K G      + N L++   + G +  A+ V   M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
               +LPD +T  ++   +C  G +  A    KEME + L  ++V Y+ +++ +   G++
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNT 190
             A KL+  L   G+ PN VT+ +++K YCKEG++++A K+V+ ++EN     D V Y  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  C+ G ME+A R+ D M   G+++N    NT+++  C   ++ E   LL +   RG
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             LDE SY TL+ GY R     +A +  D M       +T TYN ++ G    G  + A+
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +   +L+ G++P+E + +T++ GF   G+ E+AL    + + +    ++VT N +++GL
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A + F          DS+TY TLI   CK   L  A  +  EME     P  
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             + +  T L              I  ++GK+N   V+     + + + P++++Y   I 
Sbjct: 516 EMFNSFITGLF-------------IAKQSGKVNDIRVE----MSAKGLSPNTVTYGALIA 558

Query: 491 EHCSQGRYKDALQIFEETRQKGIAIN 516
             C +G   DA  ++ E  +KG+  N
Sbjct: 559 GWCKEGNLHDACILYFEMVEKGLKPN 584



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 260/563 (46%), Gaps = 78/563 (13%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YNT+++   K G++ EV  LL   + +G+  +  +YN LV GYC+ G++ +A    D+M
Sbjct: 307 VYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM 366

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N       TYN L+NG+C+ G +++A +L   M    ++P+ ++ +TL++ FF++G++
Sbjct: 367 VRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKT 426

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A  L  E    G+  N VT N +I   CK  ++ +A ++   M+E     D +TY TL
Sbjct: 427 EQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTL 486

Query: 192 IDANCKAGNMEEAFRMM--------------------------------DV---MGRKGL 216
           ID  CK G++  A ++                                 D+   M  KGL
Sbjct: 487 IDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGL 546

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA-- 274
             NT+T   ++   C E  L +A +L     ++G   +      L++ ++R+ K + A  
Sbjct: 547 SPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANL 606

Query: 275 --LKLWDEMKERQIMPSTFT----------------------YNAMIWGLSQSGKTEQAI 310
              KL D    +    ST                        +N +I GL + G+   A 
Sbjct: 607 VLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADAR 666

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++  +L   G IPD  T++++IHG  + G ++ A    ++M+     P+IVT N L+ GL
Sbjct: 667 NLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGL 726

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A+  F     KG + +++TYNTLI   CK+    +AF L  +M ++ + P  
Sbjct: 727 CKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTV 786

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           +TY  +   L   G +EEA K    M+E                   +DP+ I+Y   I 
Sbjct: 787 FTYTILIHGLCTQGYMEEAIKLLDQMIE-----------------NNVDPNFITYWTLIQ 829

Query: 491 EHCSQGRYKDALQIFEETRQKGI 513
            +   G  K   +++ E    G+
Sbjct: 830 GYARCGNMKAITKLYNEMHICGL 852



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 217/454 (47%), Gaps = 26/454 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ ++ +T+LD  FK GK  +  +L  +   +GL  N  T N +++G CK   + EA
Sbjct: 405 GVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEA 464

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +     D  TY  LI+G+C  G L  A ++R EME+L  +P V  +N+ I  
Sbjct: 465 EELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITG 524

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F + +S +   +  E+   G+ PN VT+  +I  +CKEG +  AC +   M E G  P+
Sbjct: 525 LFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPN 584

Query: 185 CVTYNTLIDANCKAGNMEEA--------------------------FRMMDVMGRKGLKM 218
               + L+    + G ++EA                            +++ +     + 
Sbjct: 585 LFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQS 644

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
             I  N ++  LC   ++ +A  L      +G+  D  +Y +LI G       + A  L 
Sbjct: 645 AKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLR 704

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           DEM   ++ P+  TYN++I+GL +S    +A+ + N+L   G+ P+  T+NT+I G C +
Sbjct: 705 DEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKD 764

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G   +A +   KM+++  +P + T  IL+ GLC +G +E+A+K     I      + +TY
Sbjct: 765 GNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITY 824

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            TLI    +   ++    L +EM    L P  +T
Sbjct: 825 WTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 188/380 (49%), Gaps = 32/380 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C  D++TY T++D   K G L     +  +M+  G VP+   +N  ++G   L  
Sbjct: 471 MKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITG---LFI 527

Query: 61  LKEAMRVVDL---MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            K++ +V D+   M+     P+  TY  LI GWC  G L +A  L  EM    L P++  
Sbjct: 528 AKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFI 587

Query: 118 YNTLINRFFESGRSMEAFKLIDELDE------------------HGIKPNA--------V 151
            + L++ F+  G+  EA  ++ +L +                  H I+  A        +
Sbjct: 588 CSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKI 647

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             NI+I   CK G++  A  +  +++  GF PD  TY++LI     +G+++ AF + D M
Sbjct: 648 MWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEM 707

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
               L  N +T N++++ LC    +  A  L N    +G   + ++Y TLI G+ +D   
Sbjct: 708 LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNT 767

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A KL  +M +  I P+ FTY  +I GL   G  E+AI +L++++++ + P+  T+ T+
Sbjct: 768 TEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTL 827

Query: 332 IHGFCSEGQVEKALQFHNKM 351
           I G+   G ++   + +N+M
Sbjct: 828 IQGYARCGNMKAITKLYNEM 847



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 165/354 (46%), Gaps = 18/354 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FS    +++ L+ A+  AG +++A  + D MG+ G +    + N +L+ L     +  A 
Sbjct: 90  FSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAV 149

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G   D+ +   +   Y RD +   A     EM+E  +  +   Y+A++ G 
Sbjct: 150 AVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGY 209

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPD 359
            + G+TE A  +L+ L   G+ P+  T+  ++ G+C EG++E+A +   ++ E +    D
Sbjct: 210 CRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVID 269

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            V    L++G C+ G +E A +     I  G  V+   YNT+I+  CK  R+ +   LL 
Sbjct: 270 EVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQ 329

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
             E + +  D Y+Y  +       G + +A +   +MV  G                   
Sbjct: 330 ANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNG-----------------FT 372

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            ++++Y+  +N  CS+G   DAL+++    ++G+  N+ +   L++G  K  K+
Sbjct: 373 GTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKT 426



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 187/434 (43%), Gaps = 64/434 (14%)

Query: 111 LLPDVV-----------TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           L PD+V           +++ L+    ++G+  +A  + DE+ + G +    + N ++  
Sbjct: 79  LFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQ 138

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
             + G I  A  + + M   G  PD  T   +  A C+ G +  A   +  M   GL +N
Sbjct: 139 LVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVN 198

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
                                               V+Y  ++ GY R  +   A KL  
Sbjct: 199 L-----------------------------------VAYHAVMDGYCRIGQTEVARKLLH 223

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSE 338
            ++ + + P+  TY  ++ G  + G+ E+A  ++ E+ ++  ++ DE  +  +I+G+C  
Sbjct: 224 SLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQR 283

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G++E A +  ++M++   + ++   N +++G C+ G + +  K  ++   +G  +D  +Y
Sbjct: 284 GRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSY 343

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           NTL+   C++  +  AF     M          TY  +       G +++A K   +M++
Sbjct: 344 NTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLK 403

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G +                 P+ IS S  ++     G+ + AL +++ET  +G+A N  
Sbjct: 404 RGVV-----------------PNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVV 446

Query: 519 TYMNLMNGLIKRRK 532
           T   ++NGL K R+
Sbjct: 447 TINTVINGLCKNRR 460


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 247/454 (54%), Gaps = 2/454 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T N I++     G++      +S + K G  PN  T N L+ G C  G +KEA+R 
Sbjct: 91  PDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRF 150

Query: 68  VD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            D ++ Q   L  + +Y +LING C  G    A RL + +E   + P+VV Y+ +I+R  
Sbjct: 151 HDKVLAQGFRLSGI-SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLC 209

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     EA+ L  E+   GI P+ VT++I++  +C  G++++A  ++  M     +PD  
Sbjct: 210 KDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIY 269

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY  L+DA CK G ++EA  ++ VM +  + ++ +  +T++   C   +++ A  +  + 
Sbjct: 270 TYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM 329

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           ++ G   D   Y  +I G  + ++ + AL L++E+ ++ ++P T TY ++I  L +SG+ 
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRI 389

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
               D+ +E+L  G  PD  T+N +I   C  G +++A+   NKM +++ +P++ T  IL
Sbjct: 390 SYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTIL 449

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLC+ G L+ AL+FF+  + KG  ++  TY  +I+ LCKE  L++A  L S ME+   
Sbjct: 450 LDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGC 509

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             D  T+  +  A  +    ++A+K    M+  G
Sbjct: 510 ISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 233/467 (49%), Gaps = 17/467 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+   + M      P  + +N ++    N      A  L K+ME  ++ PD  T N +I
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F   G+ + AF  + ++ + G +PN +T N ++K  C EGK+ +A +    +   GF 
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
              ++Y  LI+  CK G    A R++  + R  ++ N +  + I+  LC +  +DEAY L
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                 +G   D V+Y  L++G+    + NRA+ L +EM    I P  +TY  ++  L +
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCK 280

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK ++A ++L  ++++ +  D   ++T++ G+C   +V  A +    M +    PD+  
Sbjct: 281 EGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHC 340

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            +I+++GLC+   +++AL  F     K    D+VTY +LI  LCK  R+   + L  EM 
Sbjct: 341 YSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEML 400

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++   PD  TY  +  AL ++G L+ A    +      K+  Q ++PN            
Sbjct: 401 DRGQPPDVITYNNLIDALCKNGHLDRAIALFN------KMKDQAIRPNVY---------- 444

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +++  ++  C  GR K+AL+ F++   KG  +N  TY  ++NGL K
Sbjct: 445 -TFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 150/280 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++DAL K+GK+ E  ++L+ M K  +  +   Y+ L+ GYC +  +  A RV
Sbjct: 266 PDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRV 325

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              MTQ    PDV  Y+++ING C    ++EA  L +E+    ++PD VTY +LI+   +
Sbjct: 326 FYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCK 385

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR    + L DE+ + G  P+ +T+N +I   CK G +D+A  +   M++    P+  T
Sbjct: 386 SGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYT 445

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +  L+D  CK G ++ A      +  KG  +N  T   +++ LC E  LDEA  L +   
Sbjct: 446 FTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRME 505

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             G   D V++  +I  +F  ++ ++A KL  EM  R ++
Sbjct: 506 DNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 161/322 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD VTY+ ++      G+LN   DLL++M  + + P+  TY ILV   CK G 
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA  V+ +M +     DV  Y+ L++G+C    +  A R+   M  + + PDV  Y+ 
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   +  R  EA  L +E+ +  + P+ VT+  +I   CK G+I     +   M + G
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TYN LIDA CK G+++ A  + + M  + ++ N  T   +L  LC   +L  A 
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNAL 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                   +GY L+  +Y  +I G  ++   + AL L   M++   +    T+  MI   
Sbjct: 464 EFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAF 523

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
               + ++A  ++ E++  G++
Sbjct: 524 FDKDENDKAEKLVREMIARGLL 545



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 17/264 (6%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
             A+ A+  ++ M      P TF +N ++  L    +   AI +  ++  S + PD  T 
Sbjct: 37  HNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTL 96

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N II+ FC  GQV  A    +K+++  ++P+ +T N L+ GLC EG +++AL+F    + 
Sbjct: 97  NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G  +  ++Y  LI+ +CK      A  LL  +E   + P+   Y+ I   L +   ++E
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDE 216

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A    + MV  G                 I P  ++YS  ++  C  G+   A+ +  E 
Sbjct: 217 AYDLYTEMVGKG-----------------ISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             + I  +  TY  L++ L K  K
Sbjct: 260 VLENINPDIYTYTILVDALCKEGK 283


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 264/509 (51%), Gaps = 20/509 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VTY  +L+A+ K     E  ++L +M+ +G  PN  TYN++++G C+ G + +A
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ ++     PD+ +Y  ++ G C A   ++   L  EM   K +P+ VT++ L+  
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G    A +++ ++ +HG  PN    NI+I   CK+G++D A   + NM   G +PD
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++Y T++   C+AG  E A  ++  M RK    N +T NT +  LC +  +++A  L+ 
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G  +  V+Y  L+ G+    + + AL+L++ +      P+T TY  ++ GL  + 
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAE 467

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A ++L  ++Q     +  TFN ++  FC +G VE+A++  N+M+E    P+++T N
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL G+ ++   E+AL+     + KG ++D++TY++++  L +E R E+A  +L  +++ 
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P    Y  I  AL +    ++A  F + MV  G        PN S           +
Sbjct: 588 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG------CMPNES-----------T 630

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGI 513
           Y   I     +G  K+A  +  E   KG+
Sbjct: 631 YIILIEGLAHEGLLKEARYVLSELYAKGV 659



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 266/567 (46%), Gaps = 59/567 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD      ++  L ++G+ ++   +L   +  G   +   YN LV+GYC+ G L  A R+
Sbjct: 72  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      PD +TY  +I G C+ G + +A  L  +M      P VVTY  L+    +
Sbjct: 132 IASMPVP---PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S    EA  ++DE+   G  PN VT+N++I   C+EG++D A +I+  +   GF PD V+
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248

Query: 188 YNT-----------------------------------LIDANCKAGNMEEAFRMMDVMG 212
           Y T                                   L+   C+ G +E A +++  M 
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           + G   NT   N +++ +C + ++D+AY  LN+    G   D +SY T++ G  R  +  
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 368

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L  EM  +   P+  T+N  I  L Q G  EQAI ++  + + G      T+N ++
Sbjct: 369 HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 428

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HGFC +G+V+ AL+  N +     +P+ +T   LL+GLC    L+ A +     I K   
Sbjct: 429 HGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCP 485

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +++VT+N L+S  C++  +E+A  L+++M E    P+  T+  +   + +    EEA + 
Sbjct: 486 LNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALEL 545

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              +V  G                 +   +I+YS  ++    + R ++A+Q+    +  G
Sbjct: 546 LHGLVSKG-----------------VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 588

Query: 513 IAINKSTYMNLMNGLIKRRKSISKAVD 539
           +      Y  ++  L KR ++  +A+D
Sbjct: 589 MRPKVGMYNKILFALCKRCET-DQAID 614



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 255/513 (49%), Gaps = 23/513 (4%)

Query: 17  LDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKS 76
           L  L  +  L E   L+     +G  P+      L+   C+ G   +A RV+     + +
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
             DV+ YN L+ G+C  G L+ A RL   + S+ + PD  TY  +I    + GR  +A  
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L+D++ + G +P+ VT+ ++++  CK     +A  ++  M   G +P+ VTYN +I+  C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           + G +++A  +++ +   G + + ++  T+L  LC  ++ D+  +L      +    +EV
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           ++  L+  + R     RA+++  +M +    P+T   N +I  + + G+ + A D LN +
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G  PD  ++ T++ G C  G+ E A +   +MV K+  P+ VT N  +  LC++G++
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI 402

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           E+A+K        G +V  VTYN L+   C + R++ A  L + +  +   P+  TY  +
Sbjct: 403 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTL 459

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
            T L  + RL+ A +  + M++                 ++   ++++++  ++  C +G
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQ-----------------KDCPLNAVTFNVLVSFFCQKG 502

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             ++A+++  +  + G   N  T+  L++G+ K
Sbjct: 503 FVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 535



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 239/468 (51%), Gaps = 3/468 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN I++ + ++G++++ +++L+ +   G  P+  +Y  ++ G C    
Sbjct: 202 MRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARR 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   +   M   K +P+  T++ML+  +C  GM+E A ++ ++M      P+    N 
Sbjct: 262 WDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNI 321

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR  +A+  ++ +  +G  P+ +++  +++  C+ G+ + A +++  M    
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT I   C+ G +E+A +++++M   G  +  +T N ++H  C + ++D A 
Sbjct: 382 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 441

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N+        + ++Y TL+TG    E+ + A +L   M ++    +  T+N ++   
Sbjct: 442 ELFNNLPCEP---NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFF 498

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  E+A++++N++++ G  P+  TFNT++ G   +   E+AL+  + +V K    D 
Sbjct: 499 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 558

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T + ++  L RE   E+A++   +    G       YN ++ +LCK    + A    + 
Sbjct: 559 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 618

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G L+EA+   S +   G ++  +++
Sbjct: 619 MVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLE 666


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 245/460 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F  LP   + N +L  L K  K         DM   GL P+  TYN+++    + G 
Sbjct: 207 MNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGD 266

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  + + M      PD+ TYN LI+G+   GML  A  + +EM+     PDV+TYN+
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNS 326

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  R  +AF+ +  + + G++PN VT++ +I  +CK G + +A K   +M   G
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY +LIDANCK G++ EAF++   M + G+ +N +T   +L  LC + ++ EA 
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +  K G+ L++  Y +L  GY + +   +A+ + +EM ++ + P    Y   IWGL
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + E ++ ++ E++  G+  +   + T+I  +   G+  +A+    +M +   K  +
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITV 566

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+ GLC+ G++++A+++F      G   + + Y  LI  LCK   LE+A  L +E
Sbjct: 567 VTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNE 626

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M +K + PD+  Y ++    ++ G   EA    + MVE G
Sbjct: 627 MLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 235/463 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TYN ++  L ++G L   R L  +MK +GL P+  TYN L+ GY K+G L  A
Sbjct: 246 GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V + M      PDV TYN LIN +C    + +AF     M+   L P+VVTY+TLI+ 
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G  +EA K   ++   G++PN  T+  +I   CK G +++A K+   M++ G + +
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  L+D  C+ G M EA  +   + + G  +N     ++ H     K +++A  +L 
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILE 485

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             +K+    D + YGT I G  R  +   ++ +  EM +  +  +++ Y  +I    + G
Sbjct: 486 EMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVG 545

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT +A+++L E+   G+     T+  +I G C  G V++A+++ + M     +P+I+   
Sbjct: 546 KTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYT 605

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GLC+   LE+A   F   + KG + D + Y +LI    K     +A  L + M E 
Sbjct: 606 ALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEI 665

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            +  D   Y ++       G+++ A+     M+  G I  QV+
Sbjct: 666 GMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVL 708



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 242/494 (48%), Gaps = 9/494 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTYN+++D   K G L     +  +MK  G  P+  TYN L++ +CK   
Sbjct: 277 MKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER 336

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A   +  M Q    P+V TY+ LI+ +C AGML EA +   +M  + L P+  TY +
Sbjct: 337 IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   EAFKL  E+ + G+  N VT+  ++   C++G++ +A ++   + + G
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           ++ +   Y +L     KA  ME+A  +++ M +K LK + +   T +  LC + +++++ 
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++      G   +   Y TLI  YF+  K   A+ L  EM++  I  +  TY  +I GL
Sbjct: 517 AVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGL 576

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  +QA+   + + ++G+ P+   +  +I G C    +E+A    N+M++K   PD 
Sbjct: 577 CKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDK 636

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +    L+ G  + G   +AL      +  G  +D   Y +LI    +  +++ A  LL E
Sbjct: 637 LVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDE 696

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K + PD+     +     E G + EA      M   G I         S T +   P
Sbjct: 697 MLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI---------SGTIDITVP 747

Query: 481 SSISYSEKINEHCS 494
           S ++   K+++ C+
Sbjct: 748 SCLTAVTKLHKLCA 761



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 235/485 (48%), Gaps = 21/485 (4%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           T +N+LV     LG L+EA +    M + + LP V + N L++    +     A    K+
Sbjct: 186 TLFNVLVD----LGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKD 241

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M    L P V TYN +I      G    A  L +E+   G++P+ VT+N +I  Y K G 
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +  A  +   M++ G  PD +TYN+LI+  CK   + +AF  +  M ++GL+ N +T +T
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYST 361

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++   C    L EA        + G   +E +Y +LI    +    N A KL  EM++  
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           +  +  TY A++ GL + G+  +A ++   LL++G   ++  + ++ HG+     +EKA+
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
               +M +K+ KPD++     + GLCR+  +E ++   R  +  G   +S  Y TLI + 
Sbjct: 482 DILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAY 541

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
            K  +  +A  LL EM++  +     TY  +   L + G +++A ++   M   G     
Sbjct: 542 FKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG----- 596

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            +QPN            + Y+  I+  C     ++A  +F E   KGI+ +K  Y +L++
Sbjct: 597 -LQPNI-----------MIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLID 644

Query: 526 GLIKR 530
           G +K 
Sbjct: 645 GNMKH 649



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 32/287 (11%)

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
            W +M + +++P   + N ++  LS+S K   A+    +++ +G+ P   T+N +I    
Sbjct: 204 FW-KMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLA 262

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
            EG +E A     +M  K  +PDIVT N L+ G  + G+L  A+  F      G   D +
Sbjct: 263 REGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVI 322

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN+LI+  CK  R+  AF  L  M+++ L P+  TY+ +  A  ++G L EA KF   M
Sbjct: 323 TYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDM 382

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSS------------------------ISYSEKINEH 492
           +  G      +QPN       ID +                         ++Y+  ++  
Sbjct: 383 IRVG------LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGL 436

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           C  GR ++A ++F    + G  +N+  Y +L +G IK  K + KA+D
Sbjct: 437 CEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK-AKMMEKAMD 482


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 239/461 (51%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  PD  T+ T++    ++  +     +   M + G      + N+LV+G CK G 
Sbjct: 225 MPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGR 284

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+R +    +    PD  T+N L+NG C  G +++   +   M       DV TYN+
Sbjct: 285 IEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNS 342

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   EA +++  +     +PN VT+N +I   CKE  ++ A ++ R +   G
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+N+LI   C   N E A  + + M  KG   +  T + ++ +LC E++L EA 
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL      G   + V Y TLI G  ++ +   A  ++D+M+   +  S+ TYN +I GL
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S + E+A  ++++++  G+ PD+ T+ T++  FC +G +++A      M     +PDI
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L+ GLC+ G ++ A K  RS  +KG  +    YN +I +LCK +R ++A  L  E
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETG 460
           M EK   PD  TY  +   L    G ++EA  FT  M+E G
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKG 683



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 246/491 (50%), Gaps = 19/491 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+   YN+ +S   K   LK    +   M  +   PDV T+N+LI   C A  L  A  +
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
            ++M +  L PD  T+ TL+  F E      A ++ + + E G +  +V+ N+++   CK
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           EG+I++A + +   EE GF PD VT+N L++  C+ G++++   MMD M  KG +++  T
Sbjct: 282 EGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYT 339

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            N+++  LC   ++DEA  +L+    R    + V+Y TLI    ++     A +L   + 
Sbjct: 340 YNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLT 399

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            + ++P   T+N++I GL  +   E A+++  E+ + G  PDE T++ +I   CSE +++
Sbjct: 400 SKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLK 459

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL    +M       ++V  N L+ GLC+   +  A   F    + G +  SVTYNTLI
Sbjct: 460 EALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLI 519

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           + LCK +R+E+A  L+ +M  + L PD++TY  +     + G ++ A      M   G  
Sbjct: 520 NGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNG-- 577

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                           +P  ++Y   I   C  GR   A ++    + KG+ +    Y  
Sbjct: 578 ---------------CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP 622

Query: 523 LMNGLIKRRKS 533
           ++  L KR+++
Sbjct: 623 VIQALCKRKRT 633



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 215/424 (50%), Gaps = 4/424 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TYN+++  L K G+++E  ++L  M  +   PN  TYN L+   CK   ++ A  + 
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELA 395

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            ++T    LPDV T+N LI G C     E A  L +EM+     PD  TY+ LI      
Sbjct: 396 RVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  EA  L+ E++  G   N V +N +I   CK  ++  A  I   ME  G S   VTY
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTY 515

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTLI+  CK+  +EEA ++MD M  +GLK +  T  T+L   C +  +  A  ++ + + 
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTL 575

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+YGTLI G  +  + + A KL   ++ + ++ +   YN +I  L +  +T++
Sbjct: 576 NGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKE 635

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTCNILL 367
           A+ +  E+++ G  PD  T+  +  G C+ G  +++A+ F  +M+EK   P+  +   L 
Sbjct: 636 AMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLA 695

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC   + +  ++     + KG+   S T  ++I    K ++  DA   L  + ++K  
Sbjct: 696 EGLCSLSMEDTLIQLINMVMEKGRFSQSET--SIIRGFLKIQKFNDALANLGAILDRK-K 752

Query: 428 PDRY 431
           P R+
Sbjct: 753 PRRF 756



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 186/350 (53%), Gaps = 1/350 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VTYNT++  L K+  +    +L   +  +G++P+  T+N L+ G C     + AM
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAM 427

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M +    PD +TY++LI   C+   L+EA  L KEME      +VV YNTLI+  
Sbjct: 428 ELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGL 487

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++ R  +A  + D+++  G+  ++VT+N +I   CK  ++++A +++  M   G  PD 
Sbjct: 488 CKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDK 547

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY T++   C+ G+++ A  ++  M   G + + +T  T++  LC   ++D A  LL S
Sbjct: 548 FTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRS 607

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG- 304
              +G  L   +Y  +I    + ++   A++L+ EM E+   P   TY  +  GL   G 
Sbjct: 608 VQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGG 667

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
             ++A+D   E+L+ G++P+  +F  +  G CS    +  +Q  N ++EK
Sbjct: 668 PIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEK 717



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 211/454 (46%), Gaps = 23/454 (5%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR---SMEAFKLI 138
            ++ L+     AG  +    L ++M S K+  D  T+   +  +  S      +    L+
Sbjct: 94  VFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLL 153

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            E D   +KP+   +N+ +    K  K+     +   M  +   PD  T+N LI A CKA
Sbjct: 154 MERD-FAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKA 212

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
             +  A  M++ M   GL+ +  T  T++     E  ++ A  +     + G  L  VS 
Sbjct: 213 HQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSV 272

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             L+ G  ++ +   AL+   E  E    P   T+NA++ GL ++G  +Q ++M++ +L+
Sbjct: 273 NVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLE 330

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G   D  T+N++I G C  G++++A++  + MV +  +P+ VT N L+  LC+E  +E 
Sbjct: 331 KGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEA 390

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A +  R    KG   D  T+N+LI  LC     E A  L  EM+EK   PD +TY+ +  
Sbjct: 391 ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIE 450

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           +L    RL+EA      M  +G   + VV                 Y+  I+  C   R 
Sbjct: 451 SLCSERRLKEALMLLKEMELSGCARNVVV-----------------YNTLIDGLCKNNRV 493

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            DA  IF++    G++ +  TY  L+NGL K ++
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKR 527


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 236/463 (50%), Gaps = 1/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T+ T++    ++G +     + + M + G  P + T N+L++GYCKLG 
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+  +     N   PD  TYN  +NG C  G +  A ++   M      PDV TYN 
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++G+  EA  +++++ E G  P+  T N +I   C   ++++A  + R +   G
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  T+N LI+A CK G+ + A R+ + M   G   + +T NT++  LC   KL +A 
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G     V+Y T+I G  +  +   A +++D+M  + I  +  T+N +I GL
Sbjct: 451 DLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 510

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + + A  ++++++  G+ P+  T+N+I+  +C +G ++KA      M    F+ D+
Sbjct: 511 CKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDV 570

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++GLC+ G  + ALK  R   +KG       YN +I SL +     DA  L  E
Sbjct: 571 VTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFRE 630

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           M E    PD +TY  +   L    G + EA  F   MV+ G I
Sbjct: 631 MTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFI 673



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 258/530 (48%), Gaps = 52/530 (9%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D V YN +L+ L +  K+  +  + S+M ++G+ P                    
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKP-------------------- 183

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
                          DV T+N L+   C A  +  A  + +EM S  + PD  T+ TL+ 
Sbjct: 184 ---------------DVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQ 228

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F E G    A ++   + E G  P  VT N++I  YCK G+++ A   ++    NGF P
Sbjct: 229 GFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEP 288

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TYNT ++  C+ G++  A ++MDVM ++G   +  T N +++ LC   +L+EA  +L
Sbjct: 289 DQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 348

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N   +RG   D  ++ TLI       +   AL L  ++  + + P  +T+N +I  L + 
Sbjct: 349 NQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKV 408

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  + A+ +  E+  SG  PDE T+NT+I   CS G++ KAL    +M         VT 
Sbjct: 409 GDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTY 468

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++ GLC++  +E+A + F    L+G + +++T+NTLI  LCK++R++DA  L+S+M  
Sbjct: 469 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS 528

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + L P+  TY +I T   + G +++A      M   G                E+D   +
Sbjct: 529 EGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGF---------------EVD--VV 571

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +Y   IN  C  GR + AL++    R KG+      Y  ++  L +R  +
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNT 621



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/525 (30%), Positives = 255/525 (48%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT+NT++ AL +  ++     +L +M   G+ P+ TT+  L+ G+ + G +K A
Sbjct: 180 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +RV   M +    P   T N+LING+C  G +E+A    ++  +    PD +TYNT +N 
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G    A K++D + + G  P+  T+NI++   CK G++++A  I+  M E G  PD
Sbjct: 300 LCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPD 359

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+NTLI A C    +EEA  +   +  KGL  +  T N +++ LC       A  L  
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   DEV+Y TLI       K  +AL L  EM+      ST TYN +I GL +  
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM 479

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A ++ +++   G+  +  TFNT+I G C + +++ A Q  ++M+ +  +P+ +T N
Sbjct: 480 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYN 539

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +L+  C++G ++KA    ++    G  VD VTY TLI+ LCK  R + A  LL  M  K
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 599

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +      Y  +  +L       +A      M E G+                  P + +
Sbjct: 600 GMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE-----------------PPDAFT 642

Query: 485 YSEKINEHC-SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           Y       C   G  ++A     E   KG     S++  L  GL+
Sbjct: 643 YKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 222/415 (53%), Gaps = 3/415 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN +++ L K G+L E + +L+ M ++G +P+ TT+N L+   C    L+EA+ +
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +T     PDV+T+N+LIN  C  G  + A RL +EM+S    PD VTYNTLI+    
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS 442

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L+ E++  G   + VT+N +I   CK+ +I++A ++   M+  G S + +T
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NTLID  CK   +++A +++  M  +GL+ N IT N+IL   C +  + +A  +L + +
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+ +D V+YGTLI G  +  +   ALKL   M+ + +  +   YN +I  L +   T 
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTR 622

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            A+++  E+ + G  PD  T+  +  G C   G + +A  F  +MV+K F P+  +  +L
Sbjct: 623 DAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRML 682

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             GL   G+ +  ++     I K    DS    + I    K R+  DA      +
Sbjct: 683 AEGLLNLGMDDYFIRAIEIIIEKADLGDSDV--SAIRGYLKIRKFYDALATFGRL 735



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 189/352 (53%), Gaps = 1/352 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD  T+NT++ AL    +L E  DL   +  +GL P+  T+NIL++  CK+G  + A
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLA 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ + M  +   PD  TYN LI+  C+ G L +A  L KEMES       VTYNT+I+ 
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDG 474

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++ D++D  GI  NA+T N +I   CK+ +ID A +++  M   G  P+
Sbjct: 475 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPN 534

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+++   CK G++++A  ++  M   G +++ +T  T+++ LC   +   A  LL 
Sbjct: 535 NITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLR 594

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G      +Y  +I   FR      A+ L+ EM E    P  FTY  +  GL + G
Sbjct: 595 GMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654

Query: 305 KT-EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
            +  +A D L E++  G IP+ ++F  +  G  + G  +  ++    ++EK+
Sbjct: 655 GSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKA 706



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 20/161 (12%)

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE----- 442
           L G   D+V YN L++ L +  +++    + SEM E+ + PD  T+  +  AL       
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVR 202

Query: 443 -----------SGRLEEAQKFTSIM---VETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
                      SG   +   FT++M   VE G I    ++           P+ ++ +  
Sbjct: 203 TAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIK-AALRVKARMLEMGCSPTKVTVNVL 261

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           IN +C  GR +DAL   ++    G   ++ TY   +NGL +
Sbjct: 262 INGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 282/592 (47%), Gaps = 55/592 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F C P   +YN I++ L + G  N+   +   MK + +  +  TY I +  +C+ G 
Sbjct: 181 MDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGR 240

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R++  M       +   Y  ++ G+   G  + A  L  EM    L PDV T+N 
Sbjct: 241 PYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNK 300

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + G  +E+ +L D++ + G+ PN  T NI I+  CKEG +D+A +++  +   G
Sbjct: 301 LVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREG 360

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNT+I   C+   + EA   +  M   G + N  T N+I+   C +  + +A 
Sbjct: 361 LRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDAN 420

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L  A  +G+  DE +Y +L+ G+ +D   ++A+ ++ +   + + PS   YN +I GL
Sbjct: 421 RILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGL 480

Query: 301 SQSGKTEQAIDMLNEL-----------------------------------LQSGMIPDE 325
            Q G    A+ ++NE+                                   +  G IPD 
Sbjct: 481 CQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDI 540

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+NT++ G+C + +++ A++  N+M  +   PD++T N LL+GLC+    E+ ++ F++
Sbjct: 541 FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 600

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              KG A + +TYNT+I SLC  +++ +A  LL EM+ K L PD  ++  + T   + G 
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNT--SKTPEEI-----------------DPSSISYS 486
           L+ A      M +   ++H     N   S   E++                 DP + +Y 
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             I+  C  G      +   E  +KG   + +T+  ++N L    K + +AV
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHK-VQEAV 771



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 266/553 (48%), Gaps = 59/553 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  + V Y T++   ++ G  +  R+L  +M +  L P+ TT+N LV   CK G+
Sbjct: 251 MPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGF 310

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E+ R+ D + +    P+++T+N+ I G C  G L+ A RL   +    L PDVVTYNT
Sbjct: 311 VLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNT 370

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I       R +EA + + ++   G +PN  T+N +I  YCK+G +  A +I+++    G
Sbjct: 371 VICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG 430

Query: 181 FSPD-----------------------------------CVTYNTLIDANCKAGNMEEAF 205
           F PD                                    + YNTLI   C+ G +  A 
Sbjct: 431 FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPAL 490

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++M+ M  KG K +  T N I++ LC    L +A  L+  A  +G   D  +Y TL+ GY
Sbjct: 491 QLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGY 550

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R  K + A++L + M  + + P   TYN ++ GL ++ K+E+ +++   + + G  P+ 
Sbjct: 551 CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 610

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+NTII   C+  +V +A+    +M  K   PD+V+   L++G C+ G L+ A   FR 
Sbjct: 611 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 670

Query: 386 WILKGKAVD----SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                K  D    + TYN +IS+  ++  ++ A  L SEM++    PD YTY  +     
Sbjct: 671 M---EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFC 727

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           ++G + +  KF    +E G I                 PS  ++   +N  C + + ++A
Sbjct: 728 KTGNVNQGYKFLLENIEKGFI-----------------PSLTTFGRVLNCLCVEHKVQEA 770

Query: 502 LQIFEETRQKGIA 514
           + I     QK I 
Sbjct: 771 VGIIHLMVQKDIV 783



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 259/524 (49%), Gaps = 25/524 (4%)

Query: 14  NTILDALF--------KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           NT+L+ ++        +KGK+ E  D    M      P+  +YN +++   + G+  +A 
Sbjct: 151 NTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAH 210

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +V   M   K   DV+TY + I  +C  G    A RL + M  L    + V Y T++  F
Sbjct: 211 KVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGF 270

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           +E G +  A +L DE+ E  + P+  T N ++   CK+G + ++ ++   + + G  P+ 
Sbjct: 271 YEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNL 330

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            T+N  I   CK G+++ A R++  + R+GL+ + +T NT++  LC + ++ EA   L+ 
Sbjct: 331 FTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHK 390

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G+  ++ +Y ++I GY +      A ++  +   +   P  FTY +++ G  Q G 
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGD 450

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            +QA+ +  + L  G+ P    +NT+I G C +G +  ALQ  N+M EK  KPDI T N+
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +++GLC+ G L  A       I KG   D  TYNTL+   C++ +L+ A  L++ M  + 
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + PD  TY  +   L ++ + EE  +    M E G                   P+ I+Y
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG-----------------CAPNIITY 613

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I   C+  +  +A+ +  E + KG+  +  ++  L+ G  K
Sbjct: 614 NTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 657



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 256/531 (48%), Gaps = 23/531 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG---YCKLGWLKEAMRVV 68
           TY ++L  L   GK NE+ +LLS+M+    + N     + V     Y + G ++EA+   
Sbjct: 121 TYKSMLQKLGFHGKFNEMENLLSEMRSN--LDNTLLEGVYVEAMRFYGRKGKIQEAVDTF 178

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P V++YN ++N     G   +A ++   M+  K+  DV TY   I  F  +
Sbjct: 179 ERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRT 238

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR   A +L+  +   G   NAV +  ++  + + G  D+A ++   M E    PD  T+
Sbjct: 239 GRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTF 298

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+ A CK G + E+ R+ D + ++G+  N  T N  +  LC E  LD A  LL   S+
Sbjct: 299 NKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSR 358

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+Y T+I G  R  +   A +   +M      P+ FTYN++I G  + G    
Sbjct: 359 EGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVD 418

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L + +  G  PDE T+ ++++GFC +G  ++A+      + K  +P I+  N L+ 
Sbjct: 419 ANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIK 478

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC++G++  AL+       KG   D  TYN +I+ LCK   L DA  L+ +   K   P
Sbjct: 479 GLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIP 538

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D +TY  +        +L+ A +  + M   G                 + P  I+Y+  
Sbjct: 539 DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG-----------------MTPDVITYNTL 581

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +N  C   + ++ ++IF+   +KG A N  TY  ++  L   +K +++AVD
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK-VNEAVD 631



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 223/426 (52%), Gaps = 1/426 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT++  L +K ++ E  + L  M   G  PN  TYN ++ GYCK G + +A
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++         PD +TY  L+NG+C  G  ++A  + K+     L P ++ YNTLI  
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G  + A +L++E+ E G KP+  T+N++I   CK G +  A  ++ +    G  PD
Sbjct: 480 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYNTL+D  C+   ++ A  +++ M  +G+  + IT NT+L+ LC   K +E   +  
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFK 599

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + +++G   + ++Y T+I      +K N A+ L  EMK + + P   ++  +I G  + G
Sbjct: 600 AMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVG 659

Query: 305 KTEQAIDMLNELLQSGMIPDET-TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
             + A  +   + +   +   T T+N II  F  +  ++ AL+  ++M +    PD  T 
Sbjct: 660 DLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTY 719

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +L+ G C+ G + +  KF    I KG      T+  +++ LC E ++++A G++  M +
Sbjct: 720 RVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQ 779

Query: 424 KKLGPD 429
           K + PD
Sbjct: 780 KDIVPD 785



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 45/79 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PDN TY  ++D   K G +N+    L +  ++G +P+ TT+  +++  C    
Sbjct: 707 MKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHK 766

Query: 61  LKEAMRVVDLMTQNKSLPD 79
           ++EA+ ++ LM Q   +PD
Sbjct: 767 VQEAVGIIHLMVQKDIVPD 785


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 141/433 (32%), Positives = 239/433 (55%), Gaps = 4/433 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V Y T++ AL  +G + E   LL++M   G   +  T++ +V G C LG 
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R+VD M     +P V TY  L+ G C     +EA  +   +  L    +VV +NT
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNT 316

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I      G+  EA +L + +   G +P+A T++I++   CK G+I  A +++R ME+ G
Sbjct: 317 VIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKG 376

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P+ VTY  ++ + CK G  ++   +++ M  KGL +N+   N +++ LC + ++DEA 
Sbjct: 377 FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAM 436

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     +G   D  SY T+I     +E+   A  +++ + E  ++ +  TYN +I  L
Sbjct: 437 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ + A+ +  E++  G   D  ++N +I   C +G V+++L    +M EK  KP+ 
Sbjct: 497 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 556

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+ NIL+S LC+E  +  AL+  +  + +G A D VTYNTLI+ LCK   +  A  LL +
Sbjct: 557 VSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK 616

Query: 421 MEEKKLGPDRYTY 433
           +  + + PD  TY
Sbjct: 617 LHNENVHPDIITY 629



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 241/517 (46%), Gaps = 21/517 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T+     AL + G+ NE   LL  M + G VP+   Y  ++   C  G + EA  +
Sbjct: 173 PTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M       DV T++ ++ G C  G + EA RL   M +   +P V+TY  L+     
Sbjct: 233 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 292

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             ++ EA  ++  + E     N V  N +I     EGK+ +A ++   M   G  PD  T
Sbjct: 293 VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 348

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ L+   CK G +  A R++  M +KG   N +T   +LH+ C     D+   LL   S
Sbjct: 349 YSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  L+   Y  +I    +D + + A+ L  EM+ +   P   +YN +I+ L  + + E
Sbjct: 409 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 468

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  M   LL+ G++ +  T+NTIIH    +G+ + A++   +M+      D+V+ N L+
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             +C++G ++++L        KG   ++V+YN LIS LCKERR+ DA  L  +M  + L 
Sbjct: 529 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 588

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +   L + G +  A           K++++ V P+            I+Y+ 
Sbjct: 589 PDIVTYNTLINGLCKMGWMHAALNLLE------KLHNENVHPDI-----------ITYNI 631

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            I+ HC      DA  +          +     M ++
Sbjct: 632 LISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 668



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 203/377 (53%), Gaps = 8/377 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP--NRTTYNILVSGYCKLGWLK 62
           GC+P  +TY  +L  L +  + +E R +L      G VP  N   +N ++ G    G L 
Sbjct: 275 GCMPGVMTYGFLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLA 328

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA  + + M      PD  TY++L++G C  G +  A RL +EME     P+VVTY  ++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F ++G   +   L++E+   G+  N+  +N MI   CK+G++D+A  +++ M   G +
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  +YNT+I   C    MEEA  M + +  +G+  N IT NTI+H L  + +  +A  L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                  G  LD VSY  LI    +D   +R+L L +EM E+ I P+  +YN +I  L +
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             +   A+++  ++L  G+ PD  T+NT+I+G C  G +  AL    K+  ++  PDI+T
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628

Query: 363 CNILLSGLCREGILEKA 379
            NIL+S  C+  +L+ A
Sbjct: 629 YNILISWHCKVRLLDDA 645



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 222/471 (47%), Gaps = 23/471 (4%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
           P   +YN++++    A    +A  L R+ +   ++ P   T+          GR+ EA  
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALA 196

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L+  +  HG  P+AV +  +I   C +G + +A  ++  M   G + D  T++ ++   C
Sbjct: 197 LLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC 256

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
             G + EA R++D M  KG     +T   +L  LC  ++ DEA  +L    +    L+ V
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE----LNVV 312

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            + T+I G   + K   A +L++ M  +   P   TY+ ++ GL + G+   A+ +L E+
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            + G  P+  T+  ++H FC  G  +       +M  K    +    N ++  LC++G +
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           ++A+   +    +G   D  +YNT+I  LC   ++E+A  +   + E+ +  +  TY  I
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492

Query: 437 HTALVESGRLEEAQKFTSIMV----------ETGKINHQVVQPNTSKT--------PEEI 478
             AL+  GR ++A +    M+            G I       N  ++         + I
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            P+++SY+  I+E C + R +DAL++ ++   +G+A +  TY  L+NGL K
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTY  +L +  K G  ++ R LL +M  +GL  N   YN ++   CK G 
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM ++  M      PD+ +YN +I   CN   +EEA  + + +    ++ + +TYNT
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 491

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+     GR  +A +L  E+  HG   + V++N +IK  CK+G +D++  ++  M E G
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V+YN LI   CK   + +A  +   M  +GL  + +T NT+++ LC    +  A 
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFR----DEKA---NRALKLWDEMKERQIM 287
            LL        + D ++Y  LI+ + +    D+ A   NRA+     + +R+IM
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIM 665



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 135/324 (41%), Gaps = 50/324 (15%)

Query: 239 AYMLLNSASKR-GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER-QIMPSTFTYNAM 296
           A  LL+   +R G      SY  +++   R +    AL L+  M  R ++ P+TFT+   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
              L + G+  +A+ +L  + + G +PD   + T+IH  C +G V +A    N+M+    
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
             D+ T + ++ G+C  G + +A +     + KG     +TY  L+  LC+ R+ ++A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 417 LLSEMEE-------------------------------KKLGPDRYTYAAIHTALVESGR 445
           +L  + E                               K   PD +TY+ +   L + GR
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +  A +    M + G                   P+ ++Y+  ++  C  G + D   + 
Sbjct: 362 ISSAVRLLREMEKKG-----------------FAPNVVTYTIVLHSFCKNGMWDDTRALL 404

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
           EE   KG+ +N   Y  ++  L K
Sbjct: 405 EEMSAKGLTLNSQGYNGMIYALCK 428


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 276/520 (53%), Gaps = 11/520 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P++VTY+ ++  L + G+L E   L  +M ++G  P+  TY +L+   C +G   +AM
Sbjct: 261 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 320

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +++D M     +P+V TY +LI+  C  G +EEA  + ++M    L P ++T+N LIN +
Sbjct: 321 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 380

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G  + AF+L+  +++   KPN  T+N +++  C+  K  KA  ++R + +NG  PD 
Sbjct: 381 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 440

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN L+D  CK G +  AF + + M   GL+ +  T   ++  LC   +L++A  +L S
Sbjct: 441 VTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS 500

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+G  LDEV++  LI G+ +  KA     L++ M E + + +  T+N  +  L +  K
Sbjct: 501 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 560

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  ML ++++ G++P   T   +I G C  G+   +L+   +M +    P++ T  I
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +++GLC  G +E+A     S    G + +  TY  L+ +  K  RL+ AF ++S M +  
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV---QPNTSKTPEEID--- 479
             P+ + Y+A+ +  V S     A+  +S    TG ++ + +   + + +    EI    
Sbjct: 681 CQPNSHIYSALLSGFVLSNTAIGARALSS----TGDLDARSLSSEENDNNCLSNEIKKCG 736

Query: 480 -PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            P+   Y+  +   C +GR  +A Q+ ++  + G+  +K+
Sbjct: 737 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 776



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 246/533 (46%), Gaps = 57/533 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C+P+  TY  ++D L ++GK+ E   +   M K GL P   T+N L++GYCK GW+  A
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 389

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++ +M +    P++ TYN L+ G C      +AF L + +    LLPD VTYN L++ 
Sbjct: 390 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+   AF + + ++  G++P+  T   +I   CK G++++A  I+ +M + G S D
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+  LID +CK G  ++   + + M          T N  L  L  + KL+EA  +L 
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 569

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G     V++  LI G+ R  +   +LK+ + MK+    P+ +TY  +I GL  +G
Sbjct: 570 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 629

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A  +L  +   G+ P+  T+  ++      G++++A Q  + MV+   +P+    +
Sbjct: 630 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 689

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSV--------------------TYNTLISS 404
            LLSG         A     +  L  +++ S                      YN L+  
Sbjct: 690 ALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVG 749

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRY--------------------------------- 431
           LCKE R+ +A  L  +M +  L PD+                                  
Sbjct: 750 LCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 809

Query: 432 -TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV-VQPNTS--KTPEEIDP 480
            +Y  +   L   GR++EAQK  S +V    I  +V V P+       EE DP
Sbjct: 810 ASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDP 862



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 232/516 (44%), Gaps = 19/516 (3%)

Query: 33  LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
           L  M + G   +   Y+ L+    KL     A  V   M     +     Y  ++N  C 
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD-EHGIKPNAV 151
            G ++ A     ++  L    D     +L+          EAF++ +++  E   +PN+V
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T++I+I   C+ G++++A ++ + M E G  P   TY  LI A C  G  ++A +M+D M
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             K    N  T   ++  LC E K++EA  +     K G     +++  LI GY ++   
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L   M++    P+  TYN ++ GL +  K+ +A  +L  ++ +G++PD  T+N +
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           + GFC EGQ+  A    N M     +PD  T   L+ GLC+ G LE+A     S + KG 
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           ++D VT+  LI   CK  + +D   L   M E +     +T+     AL +  +L EA  
Sbjct: 507 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 566

Query: 452 FTSIMVETG----KINHQVVQPNTSKTPEE--------------IDPSSISYSEKINEHC 493
               M++ G     + H ++     +  E                 P+  +Y+  IN  C
Sbjct: 567 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 626

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + GR ++A  I       G++ N  TY  L+   +K
Sbjct: 627 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 662



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 205/444 (46%), Gaps = 37/444 (8%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           GM E  FRL               Y+TL+    +      AF +   +   G     + +
Sbjct: 149 GMTELGFRLSYP-----------CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDY 197

Query: 154 NIMIKWYCKEGKIDKA----CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             ++   CK G +  A    CK++R     GF  D     +L+ ANC+  ++ EAFR+ +
Sbjct: 198 RTVVNALCKNGFVQAAEMFCCKVLRL----GFGLDTHVCTSLVLANCRRDDLGEAFRVFE 253

Query: 210 VMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
            M + +  + N++T + ++H LC   +L+EA+ L     ++G      +Y  LI      
Sbjct: 254 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 313

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              ++A+K+ DEM  +  +P+  TY  +I  L + GK E+A  +  ++L+ G+ P   TF
Sbjct: 314 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 373

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+G+C EG V  A Q  + M + + KP+I T N L+ GLCR     KA    R  + 
Sbjct: 374 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 433

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D VTYN L+   CKE +L  AF + + M    L PD +T+ A+   L + GRLE+
Sbjct: 434 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 493

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      MV+ G                 I    ++++  I+ HC  G+ KD   +FE  
Sbjct: 494 ANGILGSMVKKG-----------------ISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            +        T+   ++ L K  K
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYK 560



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 28/419 (6%)

Query: 142 DEHGIKPNAVTHNIMIKWYCK--EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           D  G+   AV   +++   C+  E  + K    +  M E GF      Y+TL+    K  
Sbjct: 117 DLFGVAQKAV---VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLN 173

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
               AF +   M  +G  +  I   T+++ LC    +  A M      + G+ LD     
Sbjct: 174 MGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCT 233

Query: 260 TLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
           +L+    R +    A +++++M KE    P++ TY+ +I GL ++G+ E+A  +  E+++
Sbjct: 234 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 293

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G  P   T+  +I   C  G  +KA++  ++M  K+  P++ T  IL+  LCREG +E+
Sbjct: 294 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 353

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A   FR  +  G     +T+N LI+  CKE  +  AF LLS ME+    P+  TY  +  
Sbjct: 354 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 413

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVV------------QPN------TSKTPEEIDP 480
            L    +  +A      +V+ G +  +V             Q N       S     ++P
Sbjct: 414 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 473

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +++  I+  C  GR + A  I     +KGI++++ T+  L++G  K    I KA D
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCK----IGKAKD 528


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 233/455 (51%), Gaps = 6/455 (1%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   GCLPD VTYNT++D  FK+ +L E   LL +M + G  P+  TY  L  G C+ G 
Sbjct: 604  MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 663

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYN 119
              EA+ ++D M      P+  TY+ +++G C AG + EA    ++M   +++ P V+ Y+
Sbjct: 664  FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723

Query: 120  TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
             LI+   ++GR  EA++ ++ +   G  P+ VT +I+I   C  G+ID   ++   M E 
Sbjct: 724  ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783

Query: 180  GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            G   D   YN +I+A C  G    A+ +++ M   G+  NT+T   ++  LC   ++DEA
Sbjct: 784  GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                +S  +     DE+SY TLIT      ++ +AL+L   M      P    Y  ++ G
Sbjct: 844  VSYFHSIPEDCR--DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901

Query: 300  LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            L ++G  E A  +L E+   G  PD  T+  +I G     Q+  A  +  +M+ K+ KPD
Sbjct: 902  LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961

Query: 360  IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             +  + L+   C+   ++ A K  RS    G       Y+T++ SLCK R  + A  ++ 
Sbjct: 962  AIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 420  EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            EM+ K   P  + + ++ TA V  GR++EA K  +
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 167/570 (29%), Positives = 277/570 (48%), Gaps = 42/570 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLG 59
           M+  GC  D +TYN +L  L K  ++ E    +  M++ +G  PN  T++ L+ G C  G
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395

Query: 60  WLKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAG---MLEEAFR--LRKEMES----- 108
            + +A  V + M   + + P+ +TY  L+ G C AG    LE+ F   L +E  S     
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP 455

Query: 109 -----LKLL------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
                +  L      P +VTYNTL+    +SG   +A  L++ + E G+ P+ +T N ++
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              CKE +I  A  + +   E G  P+ VTY+TLID   K   M+EA +++  M   G +
Sbjct: 516 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 575

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            NT+T +T++  L    ++++A ++L      G   D V+Y TLI G+F+ ++   A+ L
Sbjct: 576 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 635

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             EM E    PS  TY  +  GL +SG+ ++A+++L+ +   G  P+  T+++I+ G C 
Sbjct: 636 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 695

Query: 338 EGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
            G+V +AL +  KM  ++   P ++  + L+ GLC+ G +++A +F    I  G+  D V
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV 755

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           T++ LI+ LC   R++    L   M E+    D Y Y A+  A    G    A      M
Sbjct: 756 TFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815

Query: 457 VETGKINHQVVQPNTSKT---PEEIDPSSISYSEKINEHC--------------SQGRYK 499
              G   + V      K     + ID  ++SY   I E C              +  R +
Sbjct: 816 KTHGIAKNTVTHGIVIKALCGNDRID-EAVSYFHSIPEDCRDEISYNTLITSLVASRRSE 874

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            AL++       G + +   YM +M+GL K
Sbjct: 875 QALELLRAMVADGGSPDACNYMTVMDGLFK 904



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/579 (28%), Positives = 276/579 (47%), Gaps = 59/579 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC P+ VTYNT+++AL  +G+  E   LL  M   G  P   T+ +++ G CK G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A RVVD M     +PDV  + +L++  C  G ++EA+   +++  +   PD VTYNT
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++  +++GR   A  ++  L E    P   T  I +    K G +  A +   +M + G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ VTY+ LID  CKAG ++ A   + ++  K  +      +++LH LC   +L+EA 
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIA---LGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAI 298

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +        + V + +L+ G  +  + + A +L+D MKE        TYN ++ GL
Sbjct: 299 QLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355

Query: 301 SQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKP 358
            +  +  +A   +  + ++ G  P+  TF+T+I G C+ G+V +A + + +MV  +   P
Sbjct: 356 CKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISP 415

Query: 359 DIVTCNILLSGLCREG-----------ILEKALKFFRSWILKGKAVDS----------VT 397
           +  T   LL GLC+ G           +LE+  +   SW +    VD           VT
Sbjct: 416 NRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVT 475

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNTL++ L K   + DA GLL  M E  L PD  T+ ++   L +  R+ +A       +
Sbjct: 476 YNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 535

Query: 458 ETGKINHQVVQPNTSKTPEEID------------------------PSSISYSEKINEHC 493
           E G       +PN       ID                         ++++YS  ++   
Sbjct: 536 ERG------CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             GR +DA+ +  + R  G   +  TY  L++G  KR++
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 628



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/604 (26%), Positives = 273/604 (45%), Gaps = 80/604 (13%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK---------------------QGLVP 43
            G  P+  TY  +L+ L K G    +      M +                     Q   P
Sbjct: 412  GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471

Query: 44   NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
               TYN LV+G  K G +++A+ +++ M ++   PDV T+N +++G C    + +A  + 
Sbjct: 472  TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 104  KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
            K        P+VVTY+TLI+   +  +  EA +L+ ++ E G + N VT++ ++    K 
Sbjct: 532  KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 164  GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
            G+++ A  ++R M + G  PD VTYNTLID   K   + EA  ++  M   G   + +T 
Sbjct: 592  GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651

Query: 224  NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-K 282
             T+ H LC   + DEA  +L+  + RG   + ++Y +++ G  +  +   AL  +++M +
Sbjct: 652  TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711

Query: 283  ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            +  + P    Y+A+I GL ++G+ ++A + L  ++++G IPD  TF+ +I+G C  G+++
Sbjct: 712  DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771

Query: 343  KALQFHNKMVEKSFKPDI-----------------------------------VTCNILL 367
              L+    M E+  K DI                                   VT  I++
Sbjct: 772  TGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVI 831

Query: 368  SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
              LC    +++A+ +F S  +     D ++YNTLI+SL   RR E A  LL  M      
Sbjct: 832  KALCGNDRIDEAVSYFHS--IPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGS 889

Query: 428  PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI----NHQVVQPNTSKTPE------- 476
            PD   Y  +   L ++G  E A K    M   G       + ++    SK  +       
Sbjct: 890  PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949

Query: 477  -------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                    + P +I YS  I+  C   +  DA ++    R  GI    + Y  +++ L K
Sbjct: 950  FEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCK 1006

Query: 530  RRKS 533
             R +
Sbjct: 1007 NRGT 1010



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 268/539 (49%), Gaps = 34/539 (6%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYN +++ L K G++ +         + G  P   TY+ ++ G C+   + +  ++++ 
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P+  TYN L+N     G  +EAF L + M +    P+++T+  +I    + G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              AF+++DE+ + G  P+   H +++   C+ G++D+A    + +   GF+PD VTYNT
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++D   KAG +E A  ++ ++          T    +  L     L  AY   +S  + G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V+Y  LI G  +  K + AL L   ++++      F +++++ GL Q+ + E+AI
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAI 298

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L  +     +P+   FN++++G C   +V++A +  + M E     D++T NILL GL
Sbjct: 299 QLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355

Query: 371 CREGILEKALKFFRSWIL----KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM-EEKK 425
           C+   L +  + +R   L    +G + + VT++TLI  LC   R+  A+ +   M   + 
Sbjct: 356 CK---LRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEG 412

Query: 426 LGPDRYTYAAIHTALVESG---RLEEA---------QKFTSIMVETGKINHQVVQPNTSK 473
           + P+R+TYA +   L ++G   RLE+          +  +S  + + +++  +VQ     
Sbjct: 413 ISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV---- 468

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                 P+ ++Y+  +      G  +DAL + E   + G++ +  T+ ++++GL K ++
Sbjct: 469 ----CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQR 523



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 157/342 (45%), Gaps = 36/342 (10%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  + Y+ ++D L K G+++E  + L  M + G +P+  T++IL++G C  G +   + +
Sbjct: 717  PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 776

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT---------- 117
               M +     D++ YN +IN +C  G    A+ L +EM++  +  + VT          
Sbjct: 777  FCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCG 836

Query: 118  -----------------------YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
                                   YNTLI     S RS +A +L+  +   G  P+A  + 
Sbjct: 837  NDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYM 896

Query: 155  IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
             ++    K G  + A K+++ M   G SPD  TY  +I    KA  +  A    + M RK
Sbjct: 897  TVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRK 956

Query: 215  GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
             LK + I  ++++   C   K+D+A+ LL S+   G       Y T++    ++   ++A
Sbjct: 957  NLKPDAIVYSSLIDAFCKADKVDDAWKLLRSS---GIEPTITMYSTMVDSLCKNRGTDKA 1013

Query: 275  LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            L++  EMK +   P    + ++       G+ ++A+ ++N+L
Sbjct: 1014 LEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 5/278 (1%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC  D   YN +++A   KG+ +    LL +MK  G+  N  T+ I++   C    + EA
Sbjct: 784  GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +     + ++    D  +YN LI     +   E+A  L + M +    PD   Y T+++ 
Sbjct: 844  VSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             F++G    A KL+ E+   G  P+  T+ IMI    K  ++  AC     M      PD
Sbjct: 902  LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             + Y++LIDA CKA  +++A++++      G++      +T++ +LC  +  D+A  ++ 
Sbjct: 962  AIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
                +        + +L T Y  + + + A+KL ++++
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 236/453 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+N ++D L K+G+L E R L S MK+ G +P+  T+N L+ GY K G L E  ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M ++    DV TYN LIN +C  G +E A+     M+   ++ +VVT++T ++ F +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL  ++   G+  N  T+  +I   CK G++D A  ++  M   G   + VT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CK   + EA  ++ +M + G++ N +   T++H     K  ++A  LL+   
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  LD   YG LI G     K + A  L  +M E  + P+   Y  M+    +SGK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +AI ML ++L SG  P+  T+  +I G C  G +++A+   NKM +    P++     L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G L +A++ F   + KG ++D V Y  L+    K+  L DAF L ++M +  L 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            D + Y    +       + EA++  S M+  G
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 259/518 (50%), Gaps = 21/518 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T N IL  L +      VR L   +      PN  T+NI++   CK G L EA  +
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSL 210

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +   LPDV T+N LI+G+   G L+E  +L +EM       DVVTYN LIN F +
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR   A+     +   G+  N VT +  +  +CKEG + +A K+   M   G + +  T
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  CKAG +++A  ++D M R+G+ +N +T   ++  LC E+K+ EA  +L    
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   +E+ Y TLI G+F ++ + +AL L  EMK + +      Y A+I GL    K +
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L ++ +SG+ P+   + T++      G+V +A+    K+++  F+P+++T   L+
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G +++A+  F      G   +   Y  L+  LCK   L +A  L +EM  K + 
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            D+  Y A+    ++ G L +A    + M+++G                 +      Y+ 
Sbjct: 571 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG-----------------LQLDLFCYTC 613

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            I+  C+     +A ++F E    GIA +++ Y  L++
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIS 651



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 243/489 (49%), Gaps = 8/489 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLPD VT+N+++D   K G+L+EV  L+ +M++ G   +  TYN L++ +CK G 
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A      M +   + +V T++  ++ +C  G++ EA +L  +M    +  +  TY  
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++GR  +A  L+DE+   G+  N VT+ +++   CKE K+ +A  ++R ME+ G
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + Y TLI  +    N E+A  ++  M  KGL+++      ++  LC   KLDEA 
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    + G   + + Y T++   F+  K   A+ +  ++ +    P+  TY A+I GL
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  ++AI   N++   G+ P+   +  ++ G C  G + +A+Q  N+MV K    D 
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    LL G  ++G L  A       I  G  +D   Y   IS  C    + +A  + SE
Sbjct: 574 VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSE 633

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    + PDR  Y  + +   + G LEEA      M        + V P+ + +    D 
Sbjct: 634 MIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--------ERVLPSCTDSDTATDA 685

Query: 481 SSISYSEKI 489
            S+  ++ I
Sbjct: 686 GSVCTTKCI 694



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 236/495 (47%), Gaps = 25/495 (5%)

Query: 40  GLVPNRT----TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
            L P R+      + L+S     G L +A+R V  + + +  P+  T N ++        
Sbjct: 113 ALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR--- 169

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
            + + RL + +      P+V T+N +I+   + G   EA  L   + E G  P+ VT N 
Sbjct: 170 -DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNS 228

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y K G++D+  ++V  M  +G   D VTYN LI+  CK G ME A+     M R+G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  N +T +T +   C E  + EA  L      RG  L+E +Y  LI G  +  + + A+
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L DEM  + +  +  TY  ++ GL +  K  +A D+L  + ++G+  +E  + T+IHG 
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                 EKAL   ++M  K  + DI     L+ GLC    L++A          G   + 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           + Y T++ +  K  ++ +A  +L ++ +    P+  TY A+   L ++G ++EA    + 
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M + G                 +DP+  +Y+  ++  C  G   +A+Q+F E   KG+++
Sbjct: 529 MRDLG-----------------LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571

Query: 516 NKSTYMNLMNGLIKR 530
           +K  Y  L++G +K+
Sbjct: 572 DKVVYTALLDGYLKQ 586



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A++    ++E ++ P+T T N ++  L++    +++  ++  L +    P+  TFN +I 
Sbjct: 141 AVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVID 196

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
             C EG++ +A    ++M E    PD+VT N L+ G  + G L++  +        G   
Sbjct: 197 FLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA 256

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-F 452
           D VTYN LI+  CK  R+E A+G  + M+ + +  +  T++    A  + G + EA K F
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLF 316

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             + V    +N                    +Y+  I+  C  GR  DA+ + +E  ++G
Sbjct: 317 AQMRVRGMALNE------------------FTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 513 IAINKSTYMNLMNGLIKRRKSISKAVD 539
           + +N  TY  L++GL K RK +++A D
Sbjct: 359 VPLNVVTYTVLVDGLCKERK-VAEAED 384


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 263/526 (50%), Gaps = 17/526 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  V  N IL  L    ++    D    M + G  PN  T++ L++ YCK   L EA
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + +LM +   +PD+  Y++LING   AG LEE   L     +  +  DVV ++++++ 
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A ++   + + GI PN VT++I+I   C+ G++ +AC +   + + G  P 
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY++LID  CK+ N+ + F +  +M RKG   + +  + +++ L  +  +DEA     
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A KRG  L+   +  LI G FR ++    LK++  M   +++P   TY  ++ GL++ G
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A+ +  +LL+ G  PD   + T+I GFC +      LQ    M      PDI   N
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++   REG +E  L+  R  I  G   D VTYNT+I   C  +    A  L   ++  
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCG 654

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           +  P+  T+  +  A  + GR+++A    S M+E G              PE   P+ ++
Sbjct: 655 RTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG--------------PE---PNILT 697

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           YS  I+ +      + A +++E+     ++ N  +Y  L++GL K+
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 248/509 (48%), Gaps = 17/509 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD V Y+ +++ LF+ GKL E   L S    +G+  +   ++ ++  Y ++G L +A
Sbjct: 305 GIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKA 364

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V   M +    P+V TY++LING C  G + EA  +  ++    L P V+TY++LI+ 
Sbjct: 365 IEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDG 424

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +S    + F L   +   G  P+ V  +++I    ++G +D+A +      + G + +
Sbjct: 425 FCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLN 484

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              +N LID   +     +  +M  +MG   +  + +T   ++  L  + +LDEA  L  
Sbjct: 485 NYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFF 544

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K+G+  D + Y TLI G+ +       L+++  M+   I P    YN +I    + G
Sbjct: 545 QLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREG 604

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E  +++L E+++ G+ PD  T+NT+I G+CS     KA++    +     +P+ +T  
Sbjct: 605 CVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFT 664

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+   C++G ++ A+  F S + +G   + +TY+ LI    K    E AF L  +M   
Sbjct: 665 ILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGD 724

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           ++ P+  +Y+ +   L + G +EEA    S+  +     H +             P  I+
Sbjct: 725 RVSPNIVSYSILIDGLCKKGLMEEA----SLAFQCAIGRHLL-------------PDVIA 767

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGI 513
           Y   I  +C  GR  +A+ +++     GI
Sbjct: 768 YGILIRGYCKVGRLAEAMMLYDHMLVNGI 796



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 249/500 (49%), Gaps = 17/500 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY+ +++ L + G++ E   +   + KQGL P+  TY+ L+ G+CK   L++ 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +  +M +   +PDV   +MLING    GM++EA R   +     L  +   +N LI+ 
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F   R+ +  K+   +  + + P+ VT+ +++K   ++G++D+A  +   + + GFSPD
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + Y TLID  CK  +     ++  +M   G+  +    N +++    E  ++    LL 
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   D V+Y T+I GY   +  ++A+KL++ +K  +  P+  T+  +I    + G
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A+ + + +L+ G  P+  T++ +I G+      E A + + KM+     P+IV+ +
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ GLC++G++E+A   F+  I +    D + Y  LI   CK  RL +A  L   M   
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS--------KTPE 476
            + PD      +  AL E G  +      S +     +N  +V P +S        ++ +
Sbjct: 795 GIMPDDL----LQKALAEYGFQDSQASIYSTVFPESPLN-LLVCPVSSMGDILQNKRSND 849

Query: 477 EIDPSSI----SYSEKINEH 492
           ++ P +I      S  +N+H
Sbjct: 850 DLFPPNILVADDLSSDVNQH 869



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 196/436 (44%), Gaps = 49/436 (11%)

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS------------------PDC 185
           +G  P+ V ++ ++  YC+ G +D+A      M + G S                   D 
Sbjct: 135 YGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDV 193

Query: 186 V------------TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           +             Y  + ++  K G +E+       +  +GL    +  N IL  LC  
Sbjct: 194 ILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMG 253

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++  A    +   + G   + V++ TLI  Y ++ + + A  L++ M E+ I+P    Y
Sbjct: 254 NQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIY 313

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           + +I GL ++GK E+   + +  L  G+  D   F++I+  +   G + KA++ + +M++
Sbjct: 314 SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLK 373

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +   P++VT +IL++GLCR G + +A   F   + +G     +TY++LI   CK   L D
Sbjct: 374 EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 433

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQP--- 469
            FGL   M  K   PD    + +   L   G ++EA +F    V+ G  +N+ +      
Sbjct: 434 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID 493

Query: 470 ---NTSKTPE-----------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                 +T +           ++ P  ++Y+  +     QGR  +AL +F +  +KG + 
Sbjct: 494 GCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553

Query: 516 NKSTYMNLMNGLIKRR 531
           +   Y  L++G  K+R
Sbjct: 554 DHIIYCTLIDGFCKKR 569



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 124/221 (56%), Gaps = 10/221 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD   YN +++  F++G +  V +LL ++ K GL P+  TYN ++ GYC L  
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+++ +++   ++ P+  T+ +LI+ +C  G +++A  +   M      P+++TY+ 
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA-----CKIVRN 175
           LI+ +F++  +  AF+L +++    + PN V+++I+I   CK+G +++A     C I R+
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRH 760

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +      PD + Y  LI   CK G + EA  + D M   G+
Sbjct: 761 L-----LPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 159/540 (29%), Positives = 273/540 (50%), Gaps = 27/540 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD + YNT++D L K G   E   +L +M  +  VP   TY ILV+  CK G 
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +  +M  +   P+   Y  LI+G+  +G ++EA  L  EM      PDV+T+  
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +SG   +A K  +E+   G KPN VT+  +I+   K G++  A +I++ M  +G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC----CEKKL 236
             PD VTY  L+D  CK G ++EA +++D + +     N    +++++ LC     EK L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+ +    +A++    LD     ++I G  +  + + A +++  M      P   TYN +
Sbjct: 491 DDLFEQSKAAAET---LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNIL 547

Query: 297 IWGLSQS--GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           I GL +S   + E+A  +L++L + G +PD  T+  +  G C  G+V++A++   +   +
Sbjct: 548 INGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
            +  D+V    L +GLC +G +++A+  F+  + +G A D+  Y  +I+ L K ++LEDA
Sbjct: 608 GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDA 667

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSK 473
                EM  K   P   TY A+  AL  +G ++EA  +F S++                 
Sbjct: 668 CKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG-------------- 713

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
              E+  S + Y   I+  C   +   AL++FE+   +G      T  +L +GL++  K+
Sbjct: 714 ---ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 246/499 (49%), Gaps = 39/499 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C+P  VTY  ++++L K G L    +L   M   G  PN   Y  L+ G+ K G +KEA
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M +    PDV T+ ++I+G C +G  E+A +  +EM      P+VVTY T+I  
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR   AF+++  +  HG  P++VT+  ++  +CK G++D+A +++  +++   SP+
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469

Query: 185 CVTYNTLIDANC------------------------------------KAGNMEEAFRMM 208
              Y++L++  C                                    K G ++EA R+ 
Sbjct: 470 LQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIF 529

Query: 209 DVMGRKGLKMNTITLNTILHTLCC--EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             M  +G K +  T N +++ LC   E +++ A+ LL+   K GY  D V+Y  L  G  
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLC 589

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  + +RA+K+ +E   R        Y A+  GL   G+ ++A+ +  E+++ G  PD  
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            +  II+G     ++E A +F ++M+ K  KP + T   L+  LC  G +++A   F S 
Sbjct: 650 AYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESM 709

Query: 387 ILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
           + +G+ V SV  Y+ LI   CK  +++ A  L  +M  +   P   T A++   LV SG+
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGK 769

Query: 446 LEEAQKFTSIMVETGKINH 464
            E+AQ+    M   G   H
Sbjct: 770 TEKAQELLQEMAAGGSPPH 788



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/564 (25%), Positives = 276/564 (48%), Gaps = 58/564 (10%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TYN +++ L  +   ++   +  +M K G+ PN  ++NIL+  + +     +A+   
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLINRFFE 127
           ++M + +  PD+ T+ +L++  C AGM E+AF +  EM ++  + PD   +  ++    +
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  EA ++  ++++ G  P+A+ +N MI    K G   +A K++ NM      P  VT
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+++ CKAG +E A  +  VM   G + N++   +++H      ++ EA  L +   
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + GY  D +++  +I G  +     +A K ++EM      P+  TY  +I GLS+ G+  
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI------- 360
            A  ++  ++  G  PD  T+  ++ GFC  G++++A Q  +++ + S  P++       
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 361 ------------------------------VTCNILLSGLCREGILEKALKFFRSWILKG 390
                                         + C+I++ GLC+ G L++A + F+  + +G
Sbjct: 478 NGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIV-GLCKTGRLDEACRIFQRMVSEG 536

Query: 391 KAVDSVTYNTLISSLCKER--RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
              D+ TYN LI+ LC+ R  R+E AF LL ++E+    PD  TY  +   L + G ++ 
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A K    M+E               +    +   ++Y+      C QG+   A+ +F+E 
Sbjct: 597 AVK----MLE-------------EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            ++G A + + Y  ++NGLIK +K
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKVKK 663



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 214/423 (50%), Gaps = 7/423 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY TI+  L K G++     ++  M   G  P+  TY  L+ G+CKLG L EA
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEA 454

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR-LRKEMESLKLLPDVVTYNTLIN 123
            +++D + +  S P++  Y+ L+NG C+ G +E+    L ++ ++     D     ++I 
Sbjct: 455 AQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIV 514

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK--EGKIDKACKIVRNMEENGF 181
              ++GR  EA ++   +   G KP+A T+NI+I   C+  E ++++A  ++ ++E+ G+
Sbjct: 515 GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGY 574

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VTY  L    CK G ++ A +M++    +G   + +    +   LC + ++D A  
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L     ++G   D  +Y  +I G  + +K   A K +DEM  +   P+  TY A++  L 
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694

Query: 302 QSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +G  ++A      +L  G ++     ++ +IHGFC   +V+ AL+    M+ +   P  
Sbjct: 695 HAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L  GL R G  EKA +  +     G    + T+  ++  L   R+ +++  LL  
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL---RKSDESGKLLKL 811

Query: 421 MEE 423
           ++E
Sbjct: 812 VQE 814



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 53/321 (16%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  + G+  D  +Y  L+     ++  ++   + +EM +  I P+TF++N +I   +++ 
Sbjct: 109 AGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ----------------FH 348
           + + A+     + +    PD  TF  ++   C  G  EKA +                 H
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228

Query: 349 NKMVEK--------------------SFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             MV                       F PD +  N ++ GL + G  ++ALK   + + 
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           K      VTY  L++SLCK   LE A  L   M      P+   Y ++     +SGR++E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      MVE G                   P  I+++  I+  C  G ++ A + FEE 
Sbjct: 349 ACSLFDEMVEAG-----------------YRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
            + G   N  TY  ++ GL K
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSK 412


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 236/453 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+N ++D L K+G+L E R L S MK+ G +P+  T+N L+ GY K G L E  ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M ++    DV TYN LIN +C  G +E A+     M+   ++ +VVT++T ++ F +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL  ++   G+  N  T+  +I   CK G++D A  ++  M   G   + VT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CK   + EA  ++ +M + G++ N +   T++H     K  ++A  LL+   
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  LD   YG LI G     K + A  L  +M E  + P+   Y  M+    +SGK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +AI ML ++L SG  P+  T+  +I G C  G +++A+   NKM +    P++     L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G L +A++ F   + KG ++D V Y  L+    K+  L DAF L ++M +  L 
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            D + Y    +       + EA++  S M+  G
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 259/518 (50%), Gaps = 21/518 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T N IL  L +      VR L   +      PN  T+NI++   CK G L EA  +
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSL 210

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +   LPDV T+N LI+G+   G L+E  +L +EM       DVVTYN LIN F +
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR   A+     +   G+  N VT +  +  +CKEG + +A K+   M   G + +  T
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  CKAG +++A  ++D M R+G+ +N +T   ++  LC E+K+ EA  +L    
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   +E+ Y TLI G+F ++ + +AL L  EMK + +      Y A+I GL    K +
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L ++ +SG+ P+   + T++      G+V +A+    K+++  F+P+++T   L+
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G +++A+  F      G   +   Y  L+  LCK   L +A  L +EM  K + 
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            D+  Y A+    ++ G L +A    + M+++G                 +      Y+ 
Sbjct: 571 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG-----------------LQLDLFCYTC 613

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            I+  C+     +A ++F E    GIA +++ Y  L++
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIS 651



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 230/449 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLPD VT+N+++D   K G+L+EV  L+ +M++ G   +  TYN L++ +CK G 
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A      M +   + +V T++  ++ +C  G++ EA +L  +M    +  +  TY  
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++GR  +A  L+DE+   G+  N VT+ +++   CKE K+ +A  ++R ME+ G
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + Y TLI  +    N E+A  ++  M  KGL+++      ++  LC   KLDEA 
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    + G   + + Y T++   F+  K   A+ +  ++ +    P+  TY A+I GL
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  ++AI   N++   G+ P+   +  ++ G C  G + +A+Q  N+MV K    D 
Sbjct: 514 CKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    LL G  ++G L  A       I  G  +D   Y   IS  C    + +A  + SE
Sbjct: 574 VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSE 633

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M    + PDR  Y  + +   + G LEEA
Sbjct: 634 MIGHGIAPDRAVYNCLISKYQKLGNLEEA 662



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 236/495 (47%), Gaps = 25/495 (5%)

Query: 40  GLVPNRT----TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
            L P R+      + L+S     G L +A+R V  + + +  P+  T N ++        
Sbjct: 113 ALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR--- 169

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
            + + RL + +      P+V T+N +I+   + G   EA  L   + E G  P+ VT N 
Sbjct: 170 -DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNS 228

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y K G++D+  ++V  M  +G   D VTYN LI+  CK G ME A+     M R+G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  N +T +T +   C E  + EA  L      RG  L+E +Y  LI G  +  + + A+
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L DEM  + +  +  TY  ++ GL +  K  +A D+L  + ++G+  +E  + T+IHG 
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                 EKAL   ++M  K  + DI     L+ GLC    L++A          G   + 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           + Y T++ +  K  ++ +A  +L ++ +    P+  TY A+   L ++G ++EA    + 
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M + G                 +DP+  +Y+  ++  C  G   +A+Q+F E   KG+++
Sbjct: 529 MRDLG-----------------LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571

Query: 516 NKSTYMNLMNGLIKR 530
           +K  Y  L++G +K+
Sbjct: 572 DKVVYTALLDGYLKQ 586



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 206/422 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  D VTYN +++   K G++       + MK++G++ N  T++  V  +CK G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EAM++   M       + +TY  LI+G C AG L++A  L  EM    +  +VVTY  
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   +  +  EA  ++  +++ G++ N + +  +I  +      +KA  ++  M+  G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   Y  LI   C    ++EA  ++  M   GL+ N I   T++       K+ EA 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L      G+  + ++Y  LI G  +    + A+  +++M++  + P+   Y A++ GL
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A+ + NE++  GM  D+  +  ++ G+  +G +  A     KM++   + D+
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 608

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                 +SG C   ++ +A + F   I  G A D   YN LIS   K   LE+A  L  E
Sbjct: 609 FCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668

Query: 421 ME 422
           ME
Sbjct: 669 ME 670



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 106/213 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ + Y T++DA FK GK+ E   +L  +   G  PN  TY  L+ G CK G 
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+   + M      P+V  Y  L++G C  G L EA +L  EM    +  D V Y  
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ + + G   +AF L  ++ + G++ +   +   I  +C    + +A ++   M  +G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
            +PD   YN LI    K GN+EEA  + D M R
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 28/269 (10%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQ--SGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           A++    ++E ++ P+T T N ++  L++  SG+      ++  L +    P+  TFN +
Sbjct: 141 AVRAVARVRELRVPPNTRTCNHILLRLARDRSGR------LVRRLFEQLPAPNVFTFNIV 194

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C EG++ +A    ++M E    PD+VT N L+ G  + G L++  +        G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VTYN LI+  CK  R+E A+G  + M+ + +  +  T++    A  + G + EA K
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 452 -FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
            F  + V    +N                    +Y+  I+  C  GR  DA+ + +E  +
Sbjct: 315 LFAQMRVRGMALNE------------------FTYTCLIDGTCKAGRLDDAIVLLDEMVR 356

Query: 511 KGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +G+ +N  TY  L++GL K RK +++A D
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERK-VAEAED 384


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 276/534 (51%), Gaps = 26/534 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P++VTY+ ++  L + G+L E   L  +M ++G  P+  TY +L+   C +G   +AM
Sbjct: 195 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 254

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +++D M     +P+V TY +LI+  C  G +EEA  + ++M    L P ++T+N LIN +
Sbjct: 255 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 314

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G  + AF+L+  +++   KPN  T+N +++  C+  K  KA  ++R + +NG  PD 
Sbjct: 315 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 374

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN L+D  CK G +  AF + + M   GL+ +  T   ++  LC   +L++A  +L S
Sbjct: 375 VTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS 434

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+G  LDEV++  LI G+ +  KA     L++ M E + + +  T+N  +  L +  K
Sbjct: 435 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 494

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  ML ++++ G++P   T   +I G C  G+   +L+   +M +    P++ T  I
Sbjct: 495 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 554

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +++GLC  G +E+A     S    G + +  TY  L+ +  K  RL+ AF ++S M +  
Sbjct: 555 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+ + Y+A+ +  V S     A+  +S    TG                ++D  S+S 
Sbjct: 615 CQPNSHIYSALLSGFVLSNTAIGARALSS----TG----------------DLDARSLSS 654

Query: 486 SEKINEHCSQGRYK-----DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            E  N   S   ++      AL+I +E ++ G+   +  Y  L+ GL K  + I
Sbjct: 655 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVP-TEDLYNFLVVGLCKEGRII 707



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 205/444 (46%), Gaps = 37/444 (8%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           GM E  FRL               Y+TL+    +      AF +   +   G     + +
Sbjct: 83  GMTELGFRLSYP-----------CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDY 131

Query: 154 NIMIKWYCKEGKIDKA----CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             ++   CK G +  A    CK++R     GF  D     +L+ ANC+  ++ EAFR+ +
Sbjct: 132 RTVVNALCKNGFVQAAEMFCCKVLRL----GFGLDTHVCTSLVLANCRRDDLGEAFRVFE 187

Query: 210 VMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
            M + +  + N++T + ++H LC   +L+EA+ L     ++G      +Y  LI      
Sbjct: 188 KMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 247

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              ++A+K+ DEM  +  +P+  TY  +I  L + GK E+A  +  ++L+ G+ P   TF
Sbjct: 248 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 307

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+G+C EG V  A Q  + M + + KP+I T N L+ GLCR     KA    R  + 
Sbjct: 308 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 367

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D VTYN L+   CKE +L  AF + + M    L PD +T+ A+   L + GRLE+
Sbjct: 368 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 427

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      MV+ G                 I    ++++  I+ HC  G+ KD   +FE  
Sbjct: 428 ANGILGSMVKKG-----------------ISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            +        T+   ++ L K  K
Sbjct: 471 VENRCLTTAHTFNCFLDALGKDYK 494



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 232/485 (47%), Gaps = 7/485 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+  TYN +++ L +  K  +   LL  +   GL+P+R TYNILV G+CK G 
Sbjct: 330 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 389

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  + + M      PD +T+  LI+G C  G LE+A  +   M    +  D VT+  
Sbjct: 390 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 449

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G++ +   L + + E+     A T N  +    K+ K+++A  ++  M + G
Sbjct: 450 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 509

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VT+  LI+ +C+AG    + +M++ M + G   N  T   I++ LC   +++EA 
Sbjct: 510 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG- 299
            +L S S  G   +  +Y  L+  + +  + +RA ++   M +    P++  Y+A++ G 
Sbjct: 570 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629

Query: 300 -LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            LS +    +A+    +L    +  +E   N +         V+ AL+  ++ ++K   P
Sbjct: 630 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE-IKKCGVP 688

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                N L+ GLC+EG + +A +  +  +  G   D    +++I   CK  + ++    +
Sbjct: 689 TEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFM 747

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV-VQPNTS--KTP 475
             + + K  P   +Y  +   L   GR++EAQK  S +V    I  +V V P+       
Sbjct: 748 KLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKE 807

Query: 476 EEIDP 480
           EE DP
Sbjct: 808 EEDDP 812



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 28/419 (6%)

Query: 142 DEHGIKPNAVTHNIMIKWYCK--EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           D  G+   AV   +++   C+  E  + K    +  M E GF      Y+TL+    K  
Sbjct: 51  DLFGVAQKAV---VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLN 107

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
               AF +   M  +G  +  I   T+++ LC    +  A M      + G+ LD     
Sbjct: 108 MGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCT 167

Query: 260 TLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
           +L+    R +    A +++++M KE    P++ TY+ +I GL ++G+ E+A  +  E+++
Sbjct: 168 SLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 227

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G  P   T+  +I   C  G  +KA++  ++M  K+  P++ T  IL+  LCREG +E+
Sbjct: 228 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 287

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A   FR  +  G     +T+N LI+  CKE  +  AF LLS ME+    P+  TY  +  
Sbjct: 288 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 347

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVV------------QPN------TSKTPEEIDP 480
            L    +  +A      +V+ G +  +V             Q N       S     ++P
Sbjct: 348 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 407

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +++  I+  C  GR + A  I     +KGI++++ T+  L++G  K    I KA D
Sbjct: 408 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCK----IGKAKD 462


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 141/433 (32%), Positives = 239/433 (55%), Gaps = 4/433 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V Y T++ AL  +G + E   LL++M   G   +  T++ +V G C LG 
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R+VD M     +P V TY  L+ G C     +EA  +   +  L    +VV +NT
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNT 316

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I      G+  EA +L + +   G +P+A T++I++   CK G+I  A +++R ME+ G
Sbjct: 317 VIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG 376

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P+ VTY  ++ + CK G  ++   +++ M  KGL +N+   N +++ LC + ++DEA 
Sbjct: 377 FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAM 436

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     +G   D  SY T+I     +E+   A  +++ + E  ++ +  TYN +I  L
Sbjct: 437 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ + A+ +  E++  G   D  ++N +I   C +G V+++L    +M EK  KP+ 
Sbjct: 497 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 556

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+ NIL+S LC+E  +  AL+  +  + +G A D VTYNTLI+ LCK   +  A  LL +
Sbjct: 557 VSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK 616

Query: 421 MEEKKLGPDRYTY 433
           +  + + PD  TY
Sbjct: 617 LHNENVHPDIITY 629



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 241/517 (46%), Gaps = 21/517 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T+     AL + G+ +E   LL  M + G VP+   Y  ++   C  G + EA  +
Sbjct: 173 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M       DV T++ ++ G C  G + EA RL   M +   +P V+TY  L+     
Sbjct: 233 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 292

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             ++ EA  ++  + E     N V  N +I     EGK+ +A ++   M   G  PD  T
Sbjct: 293 VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 348

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ L+   CK G +  A R++  M +KG   N +T   +LH+ C     D+   LL   S
Sbjct: 349 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  L+   Y  +I    +D + + A+ L  EM+ +   P   +YN +I+ L  + + E
Sbjct: 409 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 468

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  M   LL+ G++ +  T+NTIIH    +G+ + A++   +M+      D+V+ N L+
Sbjct: 469 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 528

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             +C++G ++++L        KG   ++V+YN LIS LCKERR+ DA  L  +M  + L 
Sbjct: 529 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 588

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +   L + G +  A           K++++ V P+            I+Y+ 
Sbjct: 589 PDIVTYNTLINGLCKMGWMHAALNLLE------KLHNENVHPDI-----------ITYNI 631

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            I+ HC      DA  +          +     M ++
Sbjct: 632 LISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 668



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 203/377 (53%), Gaps = 8/377 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP--NRTTYNILVSGYCKLGWLK 62
           GC+P  +TY  +L  L +  + +E R +L      G VP  N   +N ++ G    G L 
Sbjct: 275 GCMPGVMTYGFLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLA 328

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA  + + M      PD  TY++L++G C  G +  A RL +EME     P+VVTY  ++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F ++G   +   L++E+   G+  N+  +N MI   CK+G++D+A  +++ M   G +
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  +YNT+I   C    MEEA  M + +  +G+  N IT NTI+H L  + +  +A  L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                  G  LD VSY  LI    +D   +R+L L +EM E+ I P+  +YN +I  L +
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             +   A+++  ++L  G+ PD  T+NT+I+G C  G +  AL    K+  ++  PDI+T
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628

Query: 363 CNILLSGLCREGILEKA 379
            NIL+S  C+  +L+ A
Sbjct: 629 YNILISWHCKVRLLDDA 645



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 230/487 (47%), Gaps = 24/487 (4%)

Query: 63  EAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYNT 120
            A+ ++D + +   + P   +YN++++    A    +A  L R+ +   ++ P   T+  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
                   GR+ EA  L+  +  HG  P+AV +  +I   C +G + +A  ++  M   G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D  T++ ++   C  G + EA R++D M  KG     +T   +L  LC  ++ DEA 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    +    L+ V + T+I G   + K   A +L++ M  +   P   TY+ ++ GL
Sbjct: 301 AMLGRVPE----LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+   A+ +L E+ + G  P+  T+  ++H FC  G  +       +M  K    + 
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N ++  LC++G +++A+   +    +G   D  +YNT+I  LC   ++E+A  +   
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV----------ETGKINHQVVQPN 470
           + E+ +  +  TY  I  AL+  GR ++A +    M+            G I       N
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536

Query: 471 TSKT--------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
             ++         + I P+++SY+  I+E C + R +DAL++ ++   +G+A +  TY  
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 596

Query: 523 LMNGLIK 529
           L+NGL K
Sbjct: 597 LINGLCK 603



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTY  +L +  K G  ++ R LL +M  +GL  N   YN ++   CK G 
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM ++  M      PD+ +YN +I   CN   +EEA  + + +    ++ + +TYNT
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 491

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+     GR  +A +L  E+  HG   + V++N +IK  CK+G +D++  ++  M E G
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V+YN LI   CK   + +A  +   M  +GL  + +T NT+++ LC    +  A 
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFR----DEKA---NRALKLWDEMKERQIM 287
            LL        + D ++Y  LI+ + +    D+ A   NRA+     + +R+IM
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIM 665


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 236/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  P+  T N ++++     ++     +L+ + K G  P+ TT+  L+ G C  G 
Sbjct: 82  MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      P+V TY  LING C  G    A RL + ME     PDVV Y +
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  ++   GI P+  T+  ++   C   +      ++  M  + 
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V ++T++DA CK G + EA  ++D+M ++G++ + +T  T++   C + ++DEA 
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 321

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   ++G+  D +SY TLI GY +  K ++A+ L++EM  ++ +P T TYN ++ GL
Sbjct: 322 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G +PD  T++ ++   C    +E+A+     +   +  PDI
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              NI++ G+CR G LE A   F +   KG      TYN +I  LCK   L +A  L  E
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+     PD  TY  I    +++     A +    M+  G
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 541



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 223/454 (49%), Gaps = 1/454 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ E   L   M  +G  PN  TY  L++G CK+G    
Sbjct: 120 LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 179

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    PDV  Y  +I+  C    + EAF L  +M    + PD+ TY +L++
Sbjct: 180 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 239

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++++    I P+ V  + ++   CKEGK+ +A +IV  M + G  P
Sbjct: 240 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY TL+D +C    M+EA ++ D+M RKG   + I+  T+++  C   K+D+A  L 
Sbjct: 300 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 359

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++ +  D  +Y TL+ G     +   A+ L+ EM  R  MP   TY+ ++  L ++
Sbjct: 360 EEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 419

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              E+A+ +L  +  S + PD   +N II G C  G++E A    + +  K   P + T 
Sbjct: 420 CHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 479

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ GLC+ G+L +A K F        + D  TYNT+     +      A  LL EM  
Sbjct: 480 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 539

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           +    D  T   +   L + G L+++  F  + V
Sbjct: 540 RGFSADVSTTTLLVEMLSDDG-LDQSSCFLMLSV 572



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 228/470 (48%), Gaps = 17/470 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+   + +      P +  +  L+              L  +M+S  + P+V T N 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    R   AF ++ ++ + G +P+  T   +I+  C EGKI +A  +   M + G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+ VTY TLI+  CK GN   A R++  M +   + + +   +I+ +LC ++++ EA+
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   D  +Y +L+       +      L ++M   +I+P    ++ ++  L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK  +A ++++ ++Q G+ PD  T+ T++ G C + ++++A++  + MV K F PD+
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++   L++G C+   ++KA+  F     K    D+ TYNTL+  LC   RL+DA  L  E
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  +   PD  TY+ +  +L ++  LEEA       +E   +N                P
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK-AIEASNLN----------------P 439

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
               Y+  I+  C  G  + A  +F     KG+  +  TY  +++GL KR
Sbjct: 440 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKR 489



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 185/375 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C PD V Y +I+D+L K  ++ E  +L S M  QG+ P+  TY  LV   C L  
Sbjct: 187 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 246

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K    +++ M  +K LPDV  ++ +++  C  G + EA  +   M    + PDVVTY T
Sbjct: 247 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 306

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++         EA K+ D +   G  P+ +++  +I  YCK  KIDKA  +   M    
Sbjct: 307 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD  TYNTL+   C  G +++A  +   M  +G   + +T + +L +LC    L+EA 
Sbjct: 367 WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAM 426

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +        D   Y  +I G  R  +   A  L+  +  + + PS +TYN MI GL
Sbjct: 427 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A  +  E+  +   PD  T+NTI  GF    +  +A+Q   +M+ + F  D+
Sbjct: 487 CKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADV 546

Query: 361 VTCNILLSGLCREGI 375
            T  +L+  L  +G+
Sbjct: 547 STTTLLVEMLSDDGL 561



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 173/329 (52%), Gaps = 3/329 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD V ++T++DAL K+GK+ E  +++  M ++G+ P+  TY  L+ G+C    + EA++
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 322

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D+M +    PDV +Y  LING+C    +++A  L +EM   + +PD  TYNTL++   
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L  E+   G  P+ VT++I++   CK   +++A  +++ +E +  +PD  
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQ 442

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN +ID  C+AG +E A  +   +  KGL  +  T N ++H LC    L+EA  L    
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                  D  +Y T+  G+ ++ +  RA++L +EM  R       T   ++  LS  G  
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLD 562

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           + +  ++  +L      D   F  I  GF
Sbjct: 563 QSSCFLMLSVLSED---DRRYFIFIPEGF 588



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 158/304 (51%), Gaps = 25/304 (8%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V +  L+T   + +  +  L L  +M    + P+ +T N +I       +   A  +L +
Sbjct: 57  VDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAK 116

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +L+ G  PD TTF T+I G C EG++ +AL   +KM+++ F+P++VT   L++GLC+ G 
Sbjct: 117 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 176

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
              A++  RS        D V Y ++I SLCK+R++ +AF L S+M  + + PD +TY +
Sbjct: 177 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 236

Query: 436 IHTAL----------------VESGRLEEAQKFTSI---MVETGKIN--HQVVQPNTSKT 474
           +  AL                V S  L +   F+++   + + GK+   H++V     + 
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 296

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              ++P  ++Y+  ++ HC Q    +A+++F+   +KG A +  +Y  L+NG  K  K I
Sbjct: 297 ---VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK-I 352

Query: 535 SKAV 538
            KA+
Sbjct: 353 DKAM 356


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 276/534 (51%), Gaps = 26/534 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P++VTY+ ++  L + G+L E   L  +M ++G  P+  TY +L+   C +G   +AM
Sbjct: 238 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 297

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +++D M     +P+V TY +LI+  C  G +EEA  + ++M    L P ++T+N LIN +
Sbjct: 298 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 357

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G  + AF+L+  +++   KPN  T+N +++  C+  K  KA  ++R + +NG  PD 
Sbjct: 358 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 417

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN L+D  CK G +  AF + + M   GL+ +  T   ++  LC   +L++A  +L S
Sbjct: 418 VTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS 477

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+G  LDEV++  LI G+ +  KA     L++ M E + + +  T+N  +  L +  K
Sbjct: 478 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 537

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  ML ++++ G++P   T   +I G C  G+   +L+   +M +    P++ T  I
Sbjct: 538 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 597

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +++GLC  G +E+A     S    G + +  TY  L+ +  K  RL+ AF ++S M +  
Sbjct: 598 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+ + Y+A+ +  V S     A+  +S    TG                ++D  S+S 
Sbjct: 658 CQPNSHIYSALLSGFVLSNTAIGARALSS----TG----------------DLDARSLSS 697

Query: 486 SEKINEHCSQGRYK-----DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            E  N   S   ++      AL+I +E ++ G+   +  Y  L+ GL K  + I
Sbjct: 698 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVP-TEDLYNFLVVGLCKEGRII 750



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 205/444 (46%), Gaps = 37/444 (8%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           GM E  FRL               Y+TL+    +      AF +   +   G     + +
Sbjct: 126 GMTELGFRLSYP-----------CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDY 174

Query: 154 NIMIKWYCKEGKIDKA----CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             ++   CK G +  A    CK++R     GF  D     +L+ ANC+  ++ EAFR+ +
Sbjct: 175 RTVVNALCKNGFVQAAEMFCCKVLRL----GFGLDTHVCTSLVLANCRRDDLGEAFRVFE 230

Query: 210 VMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
            M + +  + N++T + ++H LC   +L+EA+ L     ++G      +Y  LI      
Sbjct: 231 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 290

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              ++A+K+ DEM  +  +P+  TY  +I  L + GK E+A  +  ++L+ G+ P   TF
Sbjct: 291 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 350

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+G+C EG V  A Q  + M + + KP+I T N L+ GLCR     KA    R  + 
Sbjct: 351 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 410

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D VTYN L+   CKE +L  AF + + M    L PD +T+ A+   L + GRLE+
Sbjct: 411 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 470

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      MV+ G                 I    ++++  I+ HC  G+ KD   +FE  
Sbjct: 471 ANGILGSMVKKG-----------------ISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            +        T+   ++ L K  K
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYK 537



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 232/485 (47%), Gaps = 7/485 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+  TYN +++ L +  K  +   LL  +   GL+P+R TYNILV G+CK G 
Sbjct: 373 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 432

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  + + M      PD +T+  LI+G C  G LE+A  +   M    +  D VT+  
Sbjct: 433 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 492

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G++ +   L + + E+     A T N  +    K+ K+++A  ++  M + G
Sbjct: 493 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 552

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VT+  LI+ +C+AG    + +M++ M + G   N  T   I++ LC   +++EA 
Sbjct: 553 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG- 299
            +L S S  G   +  +Y  L+  + +  + +RA ++   M +    P++  Y+A++ G 
Sbjct: 613 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672

Query: 300 -LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            LS +    +A+    +L    +  +E   N +         V+ AL+  ++ ++K   P
Sbjct: 673 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE-IKKCGVP 731

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                N L+ GLC+EG + +A +  +  +  G   D    +++I   CK  + ++    +
Sbjct: 732 TEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFM 790

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV-VQPNTS--KTP 475
             + + K  P   +Y  +   L   GR++EAQK  S +V    I  +V V P+       
Sbjct: 791 KLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKE 850

Query: 476 EEIDP 480
           EE DP
Sbjct: 851 EEDDP 855



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 28/419 (6%)

Query: 142 DEHGIKPNAVTHNIMIKWYCK--EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           D  G+   AV   +++   C+  E  + K    +  M E GF      Y+TL+    K  
Sbjct: 94  DLFGVAQKAV---VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLN 150

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
               AF +   M  +G  +  I   T+++ LC    +  A M      + G+ LD     
Sbjct: 151 MGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCT 210

Query: 260 TLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
           +L+    R +    A +++++M KE    P++ TY+ +I GL ++G+ E+A  +  E+++
Sbjct: 211 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 270

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G  P   T+  +I   C  G  +KA++  ++M  K+  P++ T  IL+  LCREG +E+
Sbjct: 271 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 330

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A   FR  +  G     +T+N LI+  CKE  +  AF LLS ME+    P+  TY  +  
Sbjct: 331 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 390

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVV------------QPN------TSKTPEEIDP 480
            L    +  +A      +V+ G +  +V             Q N       S     ++P
Sbjct: 391 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 450

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +++  I+  C  GR + A  I     +KGI++++ T+  L++G  K    I KA D
Sbjct: 451 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCK----IGKAKD 505


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 263/526 (50%), Gaps = 17/526 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  V  N IL  L    ++    D    M + G  PN  T++ L++ YCK   L EA
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + +LM +   +PD+  Y++LING   AG LEE   L     +  +  DVV ++++++ 
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A ++   + + GI PN VT++I+I   C+ G++ +AC +   + + G  P 
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY++LID  CK+ N+ + F +  +M RKG   + +  + +++ L  +  +DEA     
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A KRG  L+   +  LI G FR ++    LK++  M   +++P   TY  ++ GL++ G
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A+ +  +LL+ G  PD   + T+I GFC +      LQ    M      PDI   N
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++   REG +E  L+  R  I  G   D VTYNT+I   C  +    A  L   ++  
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCG 654

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           +  P+  T+  +  A  + GR+++A    S M+E G              PE   P+ ++
Sbjct: 655 RTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG--------------PE---PNILT 697

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           YS  I+ +      + A +++E+     ++ N  +Y  L++GL K+
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 248/509 (48%), Gaps = 17/509 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD V Y+ +++ LF+ GKL E   L S    +G+  +   ++ ++  Y ++G L +A
Sbjct: 305 GIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKA 364

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V   M +    P+V TY++LING C  G + EA  +  ++    L P V+TY++LI+ 
Sbjct: 365 IEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDG 424

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +S    + F L   +   G  P+ V  +++I    ++G +D+A +      + G + +
Sbjct: 425 FCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLN 484

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              +N LID   +     +  +M  +MG   +  + +T   ++  L  + +LDEA  L  
Sbjct: 485 NYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFF 544

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K+G+  D + Y TLI G+ +       L+++  M+   I P    YN +I    + G
Sbjct: 545 QLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREG 604

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E  +++L E+++ G+ PD  T+NT+I G+CS     KA++    +     +P+ +T  
Sbjct: 605 CVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFT 664

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+   C++G ++ A+  F S + +G   + +TY+ LI    K    E AF L  +M   
Sbjct: 665 ILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGD 724

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           ++ P+  +Y+ +   L + G +EEA    S+  +     H +             P  I+
Sbjct: 725 RVSPNIVSYSILIDGLCKKGLMEEA----SLAFQCAIGRHLL-------------PDVIA 767

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGI 513
           Y   I  +C  GR  +A+ +++     GI
Sbjct: 768 YGILIRGYCKVGRLAEAMMLYDHMLVNGI 796



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 228/447 (51%), Gaps = 4/447 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY+ +++ L + G++ E   +   + KQGL P+  TY+ L+ G+CK   L++ 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +  +M +   +PDV   +MLING    GM++EA R   +     L  +   +N LI+ 
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F   R+ +  K+   +  + + P+ VT+ +++K   ++G++D+A  +   + + GFSPD
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + Y TLID  CK  +     ++  +M   G+  +    N +++    E  ++    LL 
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   D V+Y T+I GY   +  ++A+KL++ +K  +  P+  T+  +I    + G
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A+ + + +L+ G  P+  T++ +I G+      E A + + KM+     P+IV+ +
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ GLC++G++E+A   F+  I +    D + Y  LI   CK  RL +A  L   M   
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQK 451
            + PD      +  AL E G  +   K
Sbjct: 795 GIMPDD----LLQKALAEYGFQDSQAK 817



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 196/436 (44%), Gaps = 49/436 (11%)

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS------------------PDC 185
           +G  P+ V ++ ++  YC+ G +D+A      M + G S                   D 
Sbjct: 135 YGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDV 193

Query: 186 V------------TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           +             Y  + ++  K G +E+       +  +GL    +  N IL  LC  
Sbjct: 194 ILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMG 253

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++  A    +   + G   + V++ TLI  Y ++ + + A  L++ M E+ I+P    Y
Sbjct: 254 NQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIY 313

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           + +I GL ++GK E+   + +  L  G+  D   F++I+  +   G + KA++ + +M++
Sbjct: 314 SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLK 373

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +   P++VT +IL++GLCR G + +A   F   + +G     +TY++LI   CK   L D
Sbjct: 374 EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 433

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQP--- 469
            FGL   M  K   PD    + +   L   G ++EA +F    V+ G  +N+ +      
Sbjct: 434 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID 493

Query: 470 ---NTSKTPE-----------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                 +T +           ++ P  ++Y+  +     QGR  +AL +F +  +KG + 
Sbjct: 494 GCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553

Query: 516 NKSTYMNLMNGLIKRR 531
           +   Y  L++G  K+R
Sbjct: 554 DHIIYCTLIDGFCKKR 569



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 124/221 (56%), Gaps = 10/221 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD   YN +++  F++G +  V +LL ++ K GL P+  TYN ++ GYC L  
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+++ +++   ++ P+  T+ +LI+ +C  G +++A  +   M      P+++TY+ 
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA-----CKIVRN 175
           LI+ +F++  +  AF+L +++    + PN V+++I+I   CK+G +++A     C I R+
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRH 760

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +      PD + Y  LI   CK G + EA  + D M   G+
Sbjct: 761 L-----LPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 268/529 (50%), Gaps = 34/529 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN +L  L ++ + ++   +  +M  +   P+  T+ IL+ G C+   L++A +++  M
Sbjct: 9   TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   +PD   YN LI+G+  A    +AF+   EM     LP VVTY  +++   ++ R+
Sbjct: 69  KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A KL+DE+ + G  PN  T+N++++  C+E K+D+A K++  M   G+ PD VTYN+ 
Sbjct: 129 RDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CK   ++EA +    + R  +  + ++  T+++ LC    LD A  +L+  S RG 
Sbjct: 189 IKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGC 245

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V+Y +LI G+ +  +  RA+ L D M +    P+   YN+++  L + G   +A D
Sbjct: 246 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAED 305

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP----------DIV 361
           ML E+ + G  PD  ++N  I G C   +V+KA    ++MVE+   P          DI+
Sbjct: 306 MLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDIL 365

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLS 419
              +LL GLC+ G  ++A   F S +L  K    D   YN ++ S CK R+++ A  +  
Sbjct: 366 LYTVLLDGLCKGGRFDEACALF-SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 424

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M EK    +  T+  +   L    RL +A+     MV+ G I                 
Sbjct: 425 QMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFI----------------- 466

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           P  ++Y   ++  C  G+   AL++FEE  + G   +  TY  L+ GL+
Sbjct: 467 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 515



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/469 (31%), Positives = 244/469 (52%), Gaps = 15/469 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC+PD+  YN ++    K     +    L++M K   +P   TY  +V G CK   
Sbjct: 68  MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A++++D M      P+++TYN+++ G C    L+EA ++ +EM      PDVVTYN+
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I    +  R  EA K +  +    + P+ V++  +I   CK G +D A +++ +M   G
Sbjct: 188 FIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY++LID  CK G +E A  ++D M + G + N +  N++L  L     + +A 
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 304

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW-- 298
            +L    +RG+  D VSY   I G  + E+  +A  ++D M ER   P+  +Y+ +I   
Sbjct: 305 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDI 364

Query: 299 --------GLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHN 349
                   GL + G+ ++A  + +++L   +  PD   +N ++   C   Q++KALQ H 
Sbjct: 365 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 424

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M+EK+   ++VT NIL+ GLC +  L  A     + + +G   D VTY TL+ ++CK  
Sbjct: 425 QMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 483

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           +   A  L  E  +    PD  TY+A+ T LV     EEA    + +VE
Sbjct: 484 KSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVE 532



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 206/425 (48%), Gaps = 10/425 (2%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           +V TYN L+ +     R  +A  +  E+ +   +P+A T  I+++  C+  +++KA K++
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M+E G  PD   YN LI    KA +  +AF+ +  M +       +T   I+  LC  
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           ++  +A  LL+    +G   +  +Y  ++ G   + K + A K+ +EM  R   P   TY
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N+ I GL +  + ++A   L  +    + PD  ++ T+I+G C  G ++ A +  + M  
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +   PD+VT + L+ G C+ G +E+A+    S +  G   + V YN+L+ +L +   +  
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  +L EME +   PD  +Y A    L ++ R+++A+     MVE G        PN S 
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG------CTPNASS 356

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
               I    + Y+  ++  C  GR+ +A  +F +   + I      + N+M     +R+ 
Sbjct: 357 YSMLI-VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 534 ISKAV 538
           I KA+
Sbjct: 416 IDKAL 420



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 167/363 (46%), Gaps = 21/363 (5%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G+  +  TYN L+    +    ++A  +   M  K  + +  T   +L  LC   +L++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL    + G   D+  Y  LI+GY + +   +A K   EM +   +P+  TY  ++ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++ +T  A+ +L+E+   G  P+  T+N I+ G C E ++++A +   +M  + + PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT N  + GLC+   +++A KF     +     D V+Y T+I+ LCK   L+ A  +L 
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M  +   PD  TY+++     + G +E A      M++ G   + V   +       + 
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 480 ------------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                             P  +SY+  I+  C   R K A  +F+   ++G   N S+Y 
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 522 NLM 524
            L+
Sbjct: 359 MLI 361



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 161/348 (46%), Gaps = 47/348 (13%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V+Y T+++ L K G L+    +L  M  +G  P+  TY+ L+ G+CK G ++ AM +
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +    P++  YN L+      G + +A  +  EME     PDVV+YN  I+   +
Sbjct: 272 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMI----------KWYCKEGKIDKACKIV-RNM 176
           + R  +A  + D + E G  PNA +++++I             CK G+ D+AC +  + +
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +E    PD   YN ++D++CK   +++A ++   M  K    N +T N ++H LC + +L
Sbjct: 392 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRL 450

Query: 237 -----------DEAYM------------------------LLNSASKRGYYLDEVSYGTL 261
                      DE ++                        L   A K G   D V+Y  L
Sbjct: 451 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 510

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           ITG   +  A  A  L+ ++ ER+ +P   T   +   L    K  +A
Sbjct: 511 ITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKA 558



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 148/325 (45%), Gaps = 21/325 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G + N  T N +L  L  E + D+A  +      +    D  ++  L+ G  R  +  +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            KL   MKE   +P    YNA+I G S++    QA   L E++++  +P   T+  I+ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C   +   A++  ++M +K   P+I T N+++ GLC E  L++A K      ++G   D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTYN+ I  LCK  R+++A   L+ M    + PD  +Y  +   L +SG L+ A +   
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M   G                   P  ++YS  I+  C  G  + A+ + +   + G  
Sbjct: 239 HMSNRG-----------------CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCR 281

Query: 515 INKSTYMNLMNGLIKRRKSISKAVD 539
            N   Y +L+ G + R   I KA D
Sbjct: 282 PNMVAYNSLL-GALHRLGHIGKAED 305



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF  +PD VTY T++DA+ K GK     +L  +  K G VP+  TY+ L++G       
Sbjct: 463 EGF--IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMA 520

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNML 86
           +EA  +   + + + +PD  T  +L
Sbjct: 521 EEAYLLFTKLVERRWVPDDKTLGLL 545


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 250/530 (47%), Gaps = 70/530 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FGC PD V YNT+++  F++G++ +  +L  +M  QG+ PN  TY  ++ G CK   
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  V   M      PD  TYN LI+G+ + G  +E  ++ +EM +  L PD +TY  
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTH--------------------------- 153
           L++   ++GR  EA    D +   GIKP+   +                           
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 154 --------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                   NIM   Y K+  I++A  I   M + G SPD V++  LIDA CK G +++A 
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 206 RMMDVM----------------------GR-------------KGLKMNTITLNTILHTL 230
              + M                      G+             +G+ ++ +  NT++  L
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNL 451

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C E ++ EA  L++   + G   + +SY TL+ G+    + + A KL D M    + P+ 
Sbjct: 452 CNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNE 511

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           FTY  ++ G  ++ + + A  +  E+L  G+ P   T+NTI+HG    G+  +A + +  
Sbjct: 512 FTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M+    K DI T NI+L+GLC+   +++A K FR    K   +DSVT+N +I +L K  R
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGR 631

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EDA  L + +    L PD  TY  I   L+E G L E     S M ++G
Sbjct: 632 KEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 254/530 (47%), Gaps = 25/530 (4%)

Query: 8   PDNV-TYNTILDALFKKG---KLNEVRDLLSDMKKQ---GLVPNRTTYNILVSGYCKLGW 60
           P +V  +N +L  + + G       V  L + M ++    + PN  TY+IL+  +C++G 
Sbjct: 46  PASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGR 105

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR-LRKEMESLKLLPDVVTYN 119
           L+       L+ +     +V   + L+ G C+A  ++EA   L   M      PDVV YN
Sbjct: 106 LEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYN 165

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN FF  G+  +A+ L  E+ + GI PN VT+  +I   CK   +D+A  + + M + 
Sbjct: 166 TVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR 225

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  TYN LI      G  +E  +M++ M   GL+ + IT   +L  LC   +  EA
Sbjct: 226 GVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREA 285

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            +  +S  ++G   D   Y  L+ GY      +      D M    + P+   +N M   
Sbjct: 286 RLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCA 345

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            ++    E+A+ + N++ Q G+ PD  +F  +I   C  G+V+ A+   N+M+ +   P+
Sbjct: 346 YAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPN 405

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   + L+ GLC  G  EKA + F   + +G  VD+V +NTL+ +LC E R+ +A  L+ 
Sbjct: 406 IFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLID 465

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M    + P+  +Y  +      +GR++EA K   +MV  G                 + 
Sbjct: 466 LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG-----------------LK 508

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           P+  +Y+  +  +C   R  DA  +F E   KG+    +TY  +++GL +
Sbjct: 509 PNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQ 558



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 225/449 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TY  +LD L K G+  E R     M ++G+ P+   Y IL+ GY   G 
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E    +DLM  N   P+   +N++   +    M+EEA  +  +M    L PDVV++  
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ PN    + ++   C  GK +KA ++   + + G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V +NTL+   C  G + EA R++D+M R G++ N I+ NT++   C   ++DEA 
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   +E +Y  L+ GY +  + + A  L+ EM  + + P   TYN ++ GL
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G+  +A ++   ++ S    D  T+N I++G C    V++A +   ++  K  + D 
Sbjct: 557 FQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDS 616

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT NI++  L + G  E A+  F +    G   D VTY  +  +L +E  L +  GL S 
Sbjct: 617 VTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSA 676

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           ME+    P+ +   A+   L+  G +  A
Sbjct: 677 MEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/579 (26%), Positives = 265/579 (45%), Gaps = 60/579 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY+ ++    + G+L         + K G   N    + L+ G C    + EA  +
Sbjct: 88  PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147

Query: 68  VDL-MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + L M++    PDV  YN +ING+   G +E+A+ L  EM    + P+VVTY T+I+   
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++     A  +  ++ + G+KP+  T+N +I  Y   GK  +  +++  M  +G  PDC+
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH------------------ 228
           TY  L+D  CK G   EA    D M RKG+K +      +LH                  
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327

Query: 229 --------------TLCCEKK---LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                           C   K   ++EA  + N   ++G   D VS+G LI    +  + 
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A+  +++M    + P+ F ++++++GL   GK E+A ++  E+L  G+  D   FNT+
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +   C+EG+V +A +  + M+    +P++++ N L++G C  G +++A K     +  G 
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             +  TY  L+   CK RR++DA+ L  EM  K + P   TY  I   L ++GR  EA +
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 452 --------------FTSIMVETGKINHQVVQPN-------TSKTPEEIDPSSISYSEKIN 490
                         +T  ++  G   +  V           SK P+     S++++  I 
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ---LDSVTFNIMIG 624

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                GR +DA+ +F      G+  +  TY  +   LI+
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIE 663



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 202/422 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   Y  +L     KG L+E+   L  M   G+ PNR  +NI+   Y K   ++EA
Sbjct: 296 GIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEA 355

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M + + M Q    PDV ++  LI+  C  G +++A     +M +  + P++  +++L+  
Sbjct: 356 MHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYG 415

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A +L  E+ + GI  +AV  N ++   C EG++ +A +++  M   G  P+
Sbjct: 416 LCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPN 475

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++YNTL+  +C  G ++EA +++DVM   GLK N  T   +L   C  +++D+AY L  
Sbjct: 476 VISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFR 535

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G      +Y T++ G F+  + + A +L+  M   +     +TYN ++ GL ++ 
Sbjct: 536 EMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNN 595

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  M   L       D  TFN +I      G+ E A+     +      PD+VT  
Sbjct: 596 FVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYR 655

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++   L  EG L +    F +    G A +S   N L+  L     +  A   L +++EK
Sbjct: 656 LIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEK 715

Query: 425 KL 426
             
Sbjct: 716 NF 717



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 201/407 (49%), Gaps = 8/407 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+   +N +  A  KK  + E   + + M++QGL P+  ++  L+   CKLG 
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   + M      P+++ ++ L+ G C  G  E+A  L  E+    +  D V +NT
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      GR MEA +LID +   G++PN +++N ++  +C  G+ID+A K++  M  NG
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA- 239
             P+  TY  L+   CKA  +++A+ +   M  KG+     T NTILH L    +  EA 
Sbjct: 507 LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEAN 566

Query: 240 --YM-LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
             Y+ ++NS +K   Y    +Y  ++ G  ++   + A K++  +  +     + T+N M
Sbjct: 567 ELYLNMINSRTKCDIY----TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I  L + G+ E A+D+   +   G++PD  T+  I      EG + +     + M +   
Sbjct: 623 IGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGT 682

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
            P+    N L+  L   G + +A  +      K  ++++ T + LIS
Sbjct: 683 APNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLIS 729



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 26/403 (6%)

Query: 133 EAFKLIDELDEHGIKPNAV-THNIMIKWYCKEGKIDKACKIV----RNMEE--NGFSPDC 185
           EA KL DEL  H  +P +V   N ++    + G    + ++V    R   E  +  +P+ 
Sbjct: 32  EALKLFDEL-LHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY-MLLN 244
            TY+ LI   C+ G +E  F    ++ + G ++N I ++ +L  LC  K++DEA  +LL 
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+ G   D V+Y T+I G+FR+ +  +A  L+ EM ++ I P+  TY  +I GL ++ 
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  +  +++  G+ PD  T+N +IHG+ S G+ ++ +Q   +M     +PD +T  
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +LL  LC+ G   +A  FF S   KG   D   Y  L+     +  L +    L  M   
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+R  +  +  A  +   +EEA    + M + G                 + P  +S
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG-----------------LSPDVVS 373

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +   I+  C  GR  DA+  F +   +G+  N   + +L+ GL
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGL 416



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++YNT++      G+++E   LL  M   GL PN  TY IL+ GYCK   + +A
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDA 530

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M      P V TYN +++G    G   EA  L   M + +   D+ TYN ++N 
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    EAFK+   L     + ++VT NIMI    K G+ + A  +   +   G  PD
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPD 650

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  + +   + G++ E   +   M + G   N+  LN ++  L     +  A + L 
Sbjct: 651 VVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLY 710

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
              ++ + L+  +   LI+ Y R E    A  L ++ +
Sbjct: 711 KLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLPEKYR 748


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 277/539 (51%), Gaps = 18/539 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V YNT++   F  G  +   ++   MK  G+ P+  T+  L+  YCK+  ++EA  + 
Sbjct: 223 DVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLY 282

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M ++  LPDV T + L++G C  G   EA+ L +EM+ + + P+ VTY T I+   + 
Sbjct: 283 EGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKV 342

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  E+  L+ E+   G+  + V +  ++    KEGKI++A  ++R+   +  +P+CVTY
Sbjct: 343 QRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTY 402

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             L+DA+C+AGN++ A +M+  M  K +  N +T ++IL+ L     + +A   +     
Sbjct: 403 TVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKD 462

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   + V+YGTLI G+F+ +    AL ++ +M    +  + F  ++++ GL ++G  E+
Sbjct: 463 SGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEE 522

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +  ++ + G++ D   + T++ G    G +  AL+   +++E++  PD V  N+ ++
Sbjct: 523 AEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFIN 582

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LCR G   +A  F +     G   D  TYNT+IS+ C+E     A  LL+EM+   + P
Sbjct: 583 CLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKP 642

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN-----HQVVQP-NTSKTPEEI---- 478
           +  TY  +   L+E+G +E+A+   + M   G         +V+Q  + S++P  I    
Sbjct: 643 NLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVH 702

Query: 479 --------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                         Y+  ++  C  G  + A  + +E   +GIA +  T+  L+ G  K
Sbjct: 703 ELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCK 761



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 261/545 (47%), Gaps = 18/545 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D V Y T++D L K+GK+ E +D+L       + PN  TY +LV  +C+ G +  A
Sbjct: 359 GVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGA 418

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +    P+V T++ ++NG    G + +A    ++M+   + P+VVTY TLI+ 
Sbjct: 419 EQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDG 478

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+      A  +  ++   G++ N    + ++    K G I++A  + ++M E G   D
Sbjct: 479 FFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLD 538

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TL+D   K GNM  A ++   +  + L  + +  N  ++ LC   K  EA   L 
Sbjct: 539 HVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLK 598

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y T+I+   R+   ++ALKL +EMK   I P+  TY  ++ GL ++G
Sbjct: 599 EMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAG 658

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  +LNE+  +G  P   T+  ++            L+ H  M+      DI   N
Sbjct: 659 VVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYN 718

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC  G+  KA       + +G A D++T+N LI   CK   L++AF   ++M  +
Sbjct: 719 TLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 778

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIM----VETGKINHQVVQPNTSKTPEEID- 479
            L P+  T+  +   L  +GR+ EA      M    +E   + + ++    +K   +++ 
Sbjct: 779 GLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEA 838

Query: 480 -------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                        P + +Y+  I++    G    A ++F E +++G+    STY  L+NG
Sbjct: 839 LRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 898

Query: 527 LIKRR 531
             K R
Sbjct: 899 WSKLR 903



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 262/532 (49%), Gaps = 20/532 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V+YN  L  L ++G       +LS+M K+G+  +  T +  + G  + G + EA  + 
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALA 175

Query: 69  DLMTQNKSLP--DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +++ + + +    V  +N LI+G+C    +  A  + + M +  L  DVV YNTL+  FF
Sbjct: 176 EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFF 235

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            SG +  A+++ + +   G++P+ VTH  +I  YCK  +I++A  +   M  +G  PD V
Sbjct: 236 YSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVV 295

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T + L+D  C+ G   EA+ +   M + G+  N +T  T + +L   ++++E+  LL   
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEM 355

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             RG  +D V Y T++    ++ K   A  +        I P+  TY  ++    ++G  
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A  ML ++ +  + P+  TF++I++G    G + KA  +  KM +    P++VT   L
Sbjct: 416 DGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTL 475

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  +    E AL  +R  + +G   ++   ++L++ L K   +E+A  L  +M E+ L
Sbjct: 476 IDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGL 535

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D   YA +   L ++G +  A           K+  ++++ N S       P ++ Y+
Sbjct: 536 LLDHVNYATLMDGLFKTGNMPAAL----------KVGQELMERNLS-------PDAVVYN 578

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             IN  C  G++ +A    +E R  G+  +++TY N M     R  + SKA+
Sbjct: 579 VFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY-NTMISAQCREGNTSKAL 629



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 229/449 (51%), Gaps = 2/449 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   +N   +++++ L K G + E   L  DM ++GL+ +   Y  L+ G  K G +  A
Sbjct: 499 GVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAA 558

Query: 65  MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           ++V  +LM +N S PD   YN+ IN  C  G   EA    KEM +  L PD  TYNT+I+
Sbjct: 559 LKVGQELMERNLS-PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMIS 617

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G + +A KL++E+    IKPN +T+  ++    + G ++KA  ++  M   GF+P
Sbjct: 618 AQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTP 677

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             +TY  ++ A   + +      + ++M   GL  +    NT++H LCC     +A ++L
Sbjct: 678 TPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVL 737

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    RG   D +++  LI G+ +    + A   + +M  + + P+  T+N ++ GL  +
Sbjct: 738 DEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESA 797

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A  ++ E+ + G+ P+  T++ ++ G+  +    +AL+ + +MV K F P   T 
Sbjct: 798 GRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 857

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+S   + G++ +A + F     +G    S TY+ L++   K R   +   LL +M+E
Sbjct: 858 NSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKE 917

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
               P + T +++  A  + G   EA++ 
Sbjct: 918 LGFKPSKGTISSMSRAFSKPGMTWEARRL 946



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 172/385 (44%), Gaps = 35/385 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT++ A  ++G  ++   LL++MK   + PN  TY  LV G  + G 
Sbjct: 600 MRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGV 659

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  +++ M      P   TY  ++     +        + + M    L  D+  YNT
Sbjct: 660 VEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNT 719

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++     G + +A  ++DE+   GI P+ +T N +I  +CK   +D A      M   G
Sbjct: 720 LVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQG 779

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+  T+NTL+     AG + EA                        T+ CE K     
Sbjct: 780 LSPNIATFNTLLGGLESAGRIGEA-----------------------DTVICEMK----- 811

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  K G   + ++Y  L+TGY +      AL+L+ EM  +  +P   TYN++I   
Sbjct: 812 -------KMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDF 864

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +++G   QA ++ +E+ + G++   +T++ +++G+       +       M E  FKP  
Sbjct: 865 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSK 924

Query: 361 VTCNILLSGLCREGILEKALKFFRS 385
            T + +     + G+  +A +  ++
Sbjct: 925 GTISSMSRAFSKPGMTWEARRLLKT 949



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 181/452 (40%), Gaps = 101/452 (22%)

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           + + G++  A  +V ++      P       LI A   +G +  A R   V G      +
Sbjct: 29  FLRAGRLSAASHVVSSLPA---PPPARLLRRLIPALASSGLVAAASRFRPVPG------D 79

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSAS--KRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            +TLN+I+ + C    L  A  LL S+S  +     D VSY   + G         A  +
Sbjct: 80  PLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPV 139

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS------------------ 319
             EM +R +     T +  + GLS++G   +A  +   L++                   
Sbjct: 140 LSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGY 199

Query: 320 -------------------GMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--------- 351
                              G+  D   +NT++ GF   G  + A +   +M         
Sbjct: 200 CKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSV 259

Query: 352 ---------------VEKSFK-----------PDIVTCNILLSGLCREGILEKALKFFRS 385
                          +E++F            PD+VT + L+ GLCR+G   +A   FR 
Sbjct: 260 VTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFRE 319

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
               G A + VTY T I SL K +R+ ++ GLL EM  + +  D   Y  +   L + G+
Sbjct: 320 MDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGK 379

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +EEA+           + H +         + I P+ ++Y+  ++ HC  G    A Q+ 
Sbjct: 380 IEEAKDV---------LRHAL--------SDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            +  +K ++ N  T+ +++NGL+K R  I+KA
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVK-RGCIAKA 453


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 241/456 (52%), Gaps = 1/456 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P+   +N +L AL K+G + E   LL  + ++G+  N  TYNI + G C+ G L EA+R
Sbjct: 186 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 245

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +VD M +  ++PDV TYN LI G C   M +EA    + M +   LPD  TYNT+I+ + 
Sbjct: 246 LVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYC 304

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     EA +L+ +    G  P+ VT+  +I   C EG +++A ++    +  G  PD V
Sbjct: 305 KISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 364

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN+L+   C  G +  A ++M+ M  +G   +  T N +++ LC    + +A +++N A
Sbjct: 365 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 424

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +GY  D  ++ TLI GY +  K + AL+L + M E  I P T TYN+++ GL ++GK 
Sbjct: 425 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 484

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +  +   E++  G  P+  T+N +I  FC   ++E+A +   KM ++   PD V+ N L
Sbjct: 485 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 544

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G CR G LE A   F+    KG +  + T+NTLI +   +  +  A  +  EM  K  
Sbjct: 545 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 604

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             D YTY  +     ++  ++ A      M++ G I
Sbjct: 605 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 640



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/451 (33%), Positives = 228/451 (50%), Gaps = 1/451 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN  +  L + G+L E   L+  M+    VP+  TYN L+ G CK    +EAM  +  M
Sbjct: 226 TYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                LPD +TYN +I+G+C   M++EA  L K+      +PD VTY +LIN     G  
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A +L +E    GIKP+ V +N ++K  C +G I  A +++  M E G  PD  TYN +
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  CK GN+ +A  +M+    KG   +  T NT++   C   KLD A  L+    + G 
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y +++ G  +  K N   + + EM  +   P+  TYN +I    +S K E+A  
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ ++ Q G+ PD  +FNT+I+GFC  G +E A     K+ EK +     T N L+    
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
            +  +  A K F   + KG   DS TY  LI   CK   ++ A+  L EM +K   P   
Sbjct: 585 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 644

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           T+  +  +L  + R+ +A     IMV+ G +
Sbjct: 645 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 675



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 262/560 (46%), Gaps = 49/560 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC---- 56
           M+ F C P    YN I+DAL      ++   +   M   G+ P+  T+ I +  +C    
Sbjct: 79  MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 138

Query: 57  ---------------------------KLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING 89
                                        G   +A ++ D M      P++  +N +++ 
Sbjct: 139 PHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHA 198

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C  G + EA  L  ++    +  ++ TYN  I    E+GR  EA +L+D +  + + P+
Sbjct: 199 LCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD 257

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+N +I+  CK+    +A   +R M   G  PD  TYNT+ID  CK   ++EA  ++ 
Sbjct: 258 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 317

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
               KG   + +T  ++++ LC E  ++ A  L N A  +G   D V Y +L+ G     
Sbjct: 318 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 377

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               AL++ +EM E    P   TYN +I GL + G    A  ++N+ +  G +PD  TFN
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I G+C   +++ ALQ   +M E    PD +T N +L+GLC+ G + +  + F+  ILK
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + +TYN LI + C+  ++E+A  ++ +M ++ L PD  ++  +      +G LE A
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 + E G           S T +  +    ++S K+N H ++       +IF+E  
Sbjct: 558 YLLFQKLEEKG----------YSATADTFNTLIGAFSGKLNMHMAE-------KIFDEML 600

Query: 510 QKGIAINKSTYMNLMNGLIK 529
            KG   +  TY  L++G  K
Sbjct: 601 SKGHRADSYTYRVLIDGSCK 620



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 217/423 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD VTYNT++  L KK    E    L  M  QG +P+  TYN ++ GYCK+  ++EA  
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 314

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++        +PD  TY  LING C  G +E A  L  E ++  + PD+V YN+L+    
Sbjct: 315 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G  + A ++++E+ E G  P+  T+NI+I   CK G I  A  ++ +    G+ PD  
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+NTLID  CK   ++ A ++++ M   G+  +TIT N++L+ LC   K++E        
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + + ++Y  LI  + R  K   A K+  +M +  + P   ++N +I+G  ++G  
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A  +  +L + G      TFNT+I  F  +  +  A +  ++M+ K  + D  T  +L
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 614

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+   +++A       I KG      T+  +I+SL    R+  A G++  M +  +
Sbjct: 615 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 674

Query: 427 GPD 429
            P+
Sbjct: 675 VPE 677



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 189/366 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD+ TYNTI+D   K   + E  +LL D   +G VP++ TY  L++G C  G ++ A
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +        PD+  YN L+ G C  G++  A ++  EM      PD+ TYN +IN 
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A  ++++    G  P+  T N +I  YCK  K+D A ++V  M E G +PD
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN++++  CKAG + E       M  KG   N IT N ++   C   K++EA  ++ 
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+ G + D VS+ TLI G+ R+     A  L+ +++E+    +  T+N +I   S   
Sbjct: 528 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 587

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A  + +E+L  G   D  T+  +I G C    V++A     +M++K F P + T  
Sbjct: 588 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 647

Query: 365 ILLSGL 370
            +++ L
Sbjct: 648 RVINSL 653



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 238/525 (45%), Gaps = 50/525 (9%)

Query: 52  VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
           +  Y + G L++A+   + M      P    YN +++   +A   ++A ++   M +  +
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119

Query: 112 LPDV-------------------------------VTYNTLINRFFESGRSMEAFKLIDE 140
            PD+                               V Y T++   +  G + +A +L D+
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 179

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           +    + PN    N ++   CK G + +A  ++  + + G S +  TYN  I   C+AG 
Sbjct: 180 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 239

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + EA R++D M R     + +T NT++  LC +    EA   L     +G   D+ +Y T
Sbjct: 240 LPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 298

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I GY +      A +L  +   +  +P   TY ++I GL   G  E+A+++ NE    G
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + PD   +N+++ G C +G +  ALQ  N+M E+   PDI T NI+++GLC+ G +  A 
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
                 I+KG   D  T+NTLI   CK  +L+ A  L+  M E  + PD  TY ++   L
Sbjct: 419 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 478

Query: 441 VESGRLEEAQKFTSIMVETG----KINHQVVQPNTSK--------------TPEEIDPSS 482
            ++G++ E  +    M+  G     I + ++  N  +              + E + P +
Sbjct: 479 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 538

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +S++  I   C  G  + A  +F++  +KG +    T+  L+   
Sbjct: 539 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 583



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 199/357 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY ++++ L  +G +    +L ++ + +G+ P+   YN LV G C  G +  A
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V++ M +    PD+ TYN++ING C  G + +A  +  +      LPDV T+NTLI+ 
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  +   A +L++ + E+GI P+ +T+N ++   CK GK+++  +  + M   G  P+
Sbjct: 443 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 502

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI+  C++  MEEA +++  M ++GL  + ++ NT+++  C    L+ AY+L  
Sbjct: 503 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 562

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++GY     ++ TLI  +      + A K++DEM  +     ++TY  +I G  ++ 
Sbjct: 563 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 622

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             ++A   L E+++ G IP  +TF  +I+      +V +A+   + MV+    P++V
Sbjct: 623 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 211/450 (46%), Gaps = 22/450 (4%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y   I  +  AG L +A    + M+     P    YN +++   ++    +A K+   + 
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
             G+ P+  TH I ++ +C   +   A +++R +   G     V Y T++      G+  
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 171

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A ++ D M    +  N    N +LH LC    + EA +LL    +RG  ++  +Y   I
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G     +   A++L D M+   + P   TYN +I GL +    ++A+  L  ++  G +
Sbjct: 232 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD+ T+NTII G+C    V++A +     V K F PD VT   L++GLC EG +E+AL+ 
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F     KG   D V YN+L+  LC +  +  A  +++EM E+   PD  TY  +   L +
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G + +A    +  +  G +                 P   +++  I+ +C + +   AL
Sbjct: 411 MGNISDATVVMNDAIMKGYL-----------------PDVFTFNTLIDGYCKRLKLDSAL 453

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Q+ E   + GIA +  TY +++NGL K  K
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGK 483



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 142/270 (52%), Gaps = 6/270 (2%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  PD +TYN++L+ L K GK+NEV +   +M  +G  PN  TYNIL+  +C+   ++E
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A +V+  M+Q    PD  ++N LI G+C  G LE A+ L +++E         T+NTLI 
Sbjct: 522 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 581

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F        A K+ DE+   G + ++ T+ ++I   CK   +D+A   +  M + GF P
Sbjct: 582 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 641

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              T+  +I++      + +A  ++ +M + G+    +  +TIL+    +K++    +L+
Sbjct: 642 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNAD--KKEIAAPKILV 697

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANR 273
               K+G ++   +Y  L  G  RD K  R
Sbjct: 698 EDLMKKG-HISYPTYEVLHEG-VRDNKLTR 725


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 241/456 (52%), Gaps = 1/456 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P+   +N +L AL K+G + E   LL  + ++G+  N  TYNI + G C+ G L EA+R
Sbjct: 184 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 243

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +VD M +  ++PDV TYN LI G C   M +EA    + M +   LPD  TYNT+I+ + 
Sbjct: 244 LVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYC 302

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     EA +L+ +    G  P+ VT+  +I   C EG +++A ++    +  G  PD V
Sbjct: 303 KISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 362

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN+L+   C  G +  A ++M+ M  +G   +  T N +++ LC    + +A +++N A
Sbjct: 363 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 422

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +GY  D  ++ TLI GY +  K + AL+L + M E  I P T TYN+++ GL ++GK 
Sbjct: 423 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 482

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +  +   E++  G  P+  T+N +I  FC   ++E+A +   KM ++   PD V+ N L
Sbjct: 483 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 542

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G CR G LE A   F+    KG +  + T+NTLI +   +  +  A  +  EM  K  
Sbjct: 543 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 602

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             D YTY  +     ++  ++ A      M++ G I
Sbjct: 603 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 638



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/451 (33%), Positives = 228/451 (50%), Gaps = 1/451 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN  +  L + G+L E   L+  M+    VP+  TYN L+ G CK    +EAM  +  M
Sbjct: 224 TYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                LPD +TYN +I+G+C   M++EA  L K+      +PD VTY +LIN     G  
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A +L +E    GIKP+ V +N ++K  C +G I  A +++  M E G  PD  TYN +
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  CK GN+ +A  +M+    KG   +  T NT++   C   KLD A  L+    + G 
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y +++ G  +  K N   + + EM  +   P+  TYN +I    +S K E+A  
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ ++ Q G+ PD  +FNT+I+GFC  G +E A     K+ EK +     T N L+    
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
            +  +  A K F   + KG   DS TY  LI   CK   ++ A+  L EM +K   P   
Sbjct: 583 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 642

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           T+  +  +L  + R+ +A     IMV+ G +
Sbjct: 643 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 673



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 262/560 (46%), Gaps = 49/560 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC---- 56
           M+ F C P    YN I+DAL      ++   +   M   G+ P+  T+ I +  +C    
Sbjct: 77  MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 136

Query: 57  ---------------------------KLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING 89
                                        G   +A ++ D M      P++  +N +++ 
Sbjct: 137 PHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHA 196

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C  G + EA  L  ++    +  ++ TYN  I    E+GR  EA +L+D +  + + P+
Sbjct: 197 LCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD 255

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+N +I+  CK+    +A   +R M   G  PD  TYNT+ID  CK   ++EA  ++ 
Sbjct: 256 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 315

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
               KG   + +T  ++++ LC E  ++ A  L N A  +G   D V Y +L+ G     
Sbjct: 316 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 375

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               AL++ +EM E    P   TYN +I GL + G    A  ++N+ +  G +PD  TFN
Sbjct: 376 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I G+C   +++ ALQ   +M E    PD +T N +L+GLC+ G + +  + F+  ILK
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + +TYN LI + C+  ++E+A  ++ +M ++ L PD  ++  +      +G LE A
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 + E G           S T +  +    ++S K+N H ++       +IF+E  
Sbjct: 556 YLLFQKLEEKGY----------SATADTFNTLIGAFSGKLNMHMAE-------KIFDEML 598

Query: 510 QKGIAINKSTYMNLMNGLIK 529
            KG   +  TY  L++G  K
Sbjct: 599 SKGHRADSYTYRVLIDGSCK 618



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 217/423 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD VTYNT++  L KK    E    L  M  QG +P+  TYN ++ GYCK+  ++EA  
Sbjct: 253 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 312

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++        +PD  TY  LING C  G +E A  L  E ++  + PD+V YN+L+    
Sbjct: 313 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 372

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G  + A ++++E+ E G  P+  T+NI+I   CK G I  A  ++ +    G+ PD  
Sbjct: 373 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 432

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+NTLID  CK   ++ A ++++ M   G+  +TIT N++L+ LC   K++E        
Sbjct: 433 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 492

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + + ++Y  LI  + R  K   A K+  +M +  + P   ++N +I+G  ++G  
Sbjct: 493 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 552

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A  +  +L + G      TFNT+I  F  +  +  A +  ++M+ K  + D  T  +L
Sbjct: 553 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 612

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+   +++A       I KG      T+  +I+SL    R+  A G++  M +  +
Sbjct: 613 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 672

Query: 427 GPD 429
            P+
Sbjct: 673 VPE 675



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 189/366 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD+ TYNTI+D   K   + E  +LL D   +G VP++ TY  L++G C  G ++ A
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +        PD+  YN L+ G C  G++  A ++  EM      PD+ TYN +IN 
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A  ++++    G  P+  T N +I  YCK  K+D A ++V  M E G +PD
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN++++  CKAG + E       M  KG   N IT N ++   C   K++EA  ++ 
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+ G + D VS+ TLI G+ R+     A  L+ +++E+    +  T+N +I   S   
Sbjct: 526 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 585

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A  + +E+L  G   D  T+  +I G C    V++A     +M++K F P + T  
Sbjct: 586 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 645

Query: 365 ILLSGL 370
            +++ L
Sbjct: 646 RVINSL 651



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 239/529 (45%), Gaps = 50/529 (9%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y   +  Y + G L++A+   + M      P    YN +++   +A   ++A ++   M 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 108 SLKLLPDV-------------------------------VTYNTLINRFFESGRSMEAFK 136
           +  + PD+                               V Y T++   +  G + +A +
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L D++    + PN    N ++   CK G + +A  ++  + + G S +  TYN  I   C
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           +AG + EA R++D M R     + +T NT++  LC +    EA   L     +G   D+ 
Sbjct: 234 EAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y T+I GY +      A +L  +   +  +P   TY ++I GL   G  E+A+++ NE 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G+ PD   +N+++ G C +G +  ALQ  N+M E+   PDI T NI+++GLC+ G +
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             A       I+KG   D  T+NTLI   CK  +L+ A  L+  M E  + PD  TY ++
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 437 HTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSK--------------TPEEI 478
              L ++G++ E  +    M+  G     I + ++  N  +              + E +
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            P ++S++  I   C  G  + A  +F++  +KG +    T+  L+   
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 581



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 199/357 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY ++++ L  +G +    +L ++ + +G+ P+   YN LV G C  G +  A
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V++ M +    PD+ TYN++ING C  G + +A  +  +      LPDV T+NTLI+ 
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  +   A +L++ + E+GI P+ +T+N ++   CK GK+++  +  + M   G  P+
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI+  C++  MEEA +++  M ++GL  + ++ NT+++  C    L+ AY+L  
Sbjct: 501 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 560

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++GY     ++ TLI  +      + A K++DEM  +     ++TY  +I G  ++ 
Sbjct: 561 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 620

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             ++A   L E+++ G IP  +TF  +I+      +V +A+   + MV+    P++V
Sbjct: 621 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 211/450 (46%), Gaps = 22/450 (4%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y   I  +  AG L +A    + M+     P    YN +++   ++    +A K+   + 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
             G+ P+  TH I ++ +C   +   A +++R +   G     V Y T++      G+  
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 169

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A ++ D M    +  N    N +LH LC    + EA +LL    +RG  ++  +Y   I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G     +   A++L D M+   + P   TYN +I GL +    ++A+  L  ++  G +
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD+ T+NTII G+C    V++A +     V K F PD VT   L++GLC EG +E+AL+ 
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F     KG   D V YN+L+  LC +  +  A  +++EM E+   PD  TY  +   L +
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G + +A    +  +  G +                 P   +++  I+ +C + +   AL
Sbjct: 409 MGNISDATVVMNDAIMKGYL-----------------PDVFTFNTLIDGYCKRLKLDSAL 451

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Q+ E   + GIA +  TY +++NGL K  K
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGK 481



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 137/257 (53%), Gaps = 8/257 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  PD +TYN++L+ L K GK+NEV +   +M  +G  PN  TYNIL+  +C+   ++E
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A +V+  M+Q    PD  ++N LI G+C  G LE A+ L +++E         T+NTLI 
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 579

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F        A K+ DE+   G + ++ T+ ++I   CK   +D+A   +  M + GF P
Sbjct: 580 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 639

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              T+  +I++      + +A  ++ +M + G+    +  +TIL+    +K++    +L+
Sbjct: 640 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNAD--KKEIAAPKILV 695

Query: 244 NSASKRGYYLDEVSYGT 260
               K+G+    +SY T
Sbjct: 696 EDLMKKGH----ISYPT 708


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 141/433 (32%), Positives = 239/433 (55%), Gaps = 4/433 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V Y T++ AL  +G + E   LL++M   G   +  T++ +V G C LG 
Sbjct: 185 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 244

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R+VD M     +P V TY  L+ G C     +EA  +   +  L    +VV +NT
Sbjct: 245 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNT 300

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I      G+  EA +L + +   G +P+A T++I++   CK G+I  A +++R ME+ G
Sbjct: 301 VIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG 360

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P+ VTY  ++ + CK G  ++   +++ M  KGL +N+   N +++ LC + ++DEA 
Sbjct: 361 FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAM 420

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     +G   D  SY T+I     +E+   A  +++ + E  ++ +  TYN +I  L
Sbjct: 421 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 480

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ + A+ +  E++  G   D  ++N +I   C +G V+++L    +M EK  KP+ 
Sbjct: 481 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 540

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+ NIL+S LC+E  +  AL+  +  + +G A D VTYNTLI+ LCK   +  A  LL +
Sbjct: 541 VSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK 600

Query: 421 MEEKKLGPDRYTY 433
           +  + + PD  TY
Sbjct: 601 LHNENVHPDIITY 613



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 241/517 (46%), Gaps = 21/517 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T+     AL + G+ +E   LL  M + G VP+   Y  ++   C  G + EA  +
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M       DV T++ ++ G C  G + EA RL   M +   +P V+TY  L+     
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             ++ EA  ++  + E     N V  N +I     EGK+ +A ++   M   G  PD  T
Sbjct: 277 VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ L+   CK G +  A R++  M +KG   N +T   +LH+ C     D+   LL   S
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  L+   Y  +I    +D + + A+ L  EM+ +   P   +YN +I+ L  + + E
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  M   LL+ G++ +  T+NTIIH    +G+ + A++   +M+      D+V+ N L+
Sbjct: 453 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 512

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             +C++G ++++L        KG   ++V+YN LIS LCKERR+ DA  L  +M  + L 
Sbjct: 513 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 572

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +   L + G +  A           K++++ V P+            I+Y+ 
Sbjct: 573 PDIVTYNTLINGLCKMGWMHAALNLLE------KLHNENVHPDI-----------ITYNI 615

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            I+ HC      DA  +          +     M ++
Sbjct: 616 LISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQIL 652



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 203/377 (53%), Gaps = 8/377 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP--NRTTYNILVSGYCKLGWLK 62
           GC+P  +TY  +L  L +  + +E R +L      G VP  N   +N ++ G    G L 
Sbjct: 259 GCMPGVMTYGFLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLA 312

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA  + + M      PD  TY++L++G C  G +  A RL +EME     P+VVTY  ++
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F ++G   +   L++E+   G+  N+  +N MI   CK+G++D+A  +++ M   G +
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  +YNT+I   C    MEEA  M + +  +G+  N IT NTI+H L  + +  +A  L
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                  G  LD VSY  LI    +D   +R+L L +EM E+ I P+  +YN +I  L +
Sbjct: 493 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 552

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             +   A+++  ++L  G+ PD  T+NT+I+G C  G +  AL    K+  ++  PDI+T
Sbjct: 553 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 612

Query: 363 CNILLSGLCREGILEKA 379
            NIL+S  C+  +L+ A
Sbjct: 613 YNILISWHCKVRLLDDA 629



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 214/457 (46%), Gaps = 25/457 (5%)

Query: 94  GMLEEAFRL---RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           G L  A R    R+ +   ++ P   T+          GR+ EA  L+  +  HG  P+A
Sbjct: 135 GGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDA 194

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           V +  +I   C +G + +A  ++  M   G + D  T++ ++   C  G + EA R++D 
Sbjct: 195 VLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDR 254

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M  KG     +T   +L  LC  ++ DEA  +L    +    L+ V + T+I G   + K
Sbjct: 255 MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE----LNVVLFNTVIGGCLAEGK 310

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A +L++ M  +   P   TY+ ++ GL + G+   A+ +L E+ + G  P+  T+  
Sbjct: 311 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 370

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++H FC  G  +       +M  K    +    N ++  LC++G +++A+   +    +G
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D  +YNT+I  LC   ++E+A  +   + E+ +  +  TY  I  AL+  GR ++A 
Sbjct: 431 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 490

Query: 451 KFTSIMV----------ETGKINHQVVQPNTSKT--------PEEIDPSSISYSEKINEH 492
           +    M+            G I       N  ++         + I P+++SY+  I+E 
Sbjct: 491 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 550

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           C + R +DAL++ ++   +G+A +  TY  L+NGL K
Sbjct: 551 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTY  +L +  K G  ++ R LL +M  +GL  N   YN ++   CK G 
Sbjct: 356 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 415

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM ++  M      PD+ +YN +I   CN   +EEA  + + +    ++ + +TYNT
Sbjct: 416 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 475

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+     GR  +A +L  E+  HG   + V++N +IK  CK+G +D++  ++  M E G
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V+YN LI   CK   + +A  +   M  +GL  + +T NT+++ LC    +  A 
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFR----DEKA---NRALKLWDEMKERQIM 287
            LL        + D ++Y  LI+ + +    D+ A   NRA+     + +R+IM
Sbjct: 596 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIM 649


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 266/507 (52%), Gaps = 17/507 (3%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           FK        D+ S + K+GL P+  T   L+S   K   LK++  V D +     +PDV
Sbjct: 197 FKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDV 256

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
             ++ +IN +C     ++A  L  +ME L + P+VVTYN +I+   +SGR  EA++  ++
Sbjct: 257 HLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEK 316

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + +  + P+ +T+++ I    K  KID+A  +++ M E GF P+ V YNTLID  CK GN
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + EA ++ D M  KG+  N++TLN+++   C   ++ +A  +L     RG  +++ S+  
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I       +   AL    EM  R + P+      ++ GL ++GK  +A+++   LL  G
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            +P+  T N +IHG C  G +++ L+    M+E+    D +T N L+SG C+EG +++  
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +     + KG   D  T+N L+  LC   ++++A  L  E ++    P+ YTY  +    
Sbjct: 557 ELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGY 616

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++ ++EE +   + +V                  ++++ +S+ Y+  I  +C  G    
Sbjct: 617 CKANKVEEGENLLNELVS-----------------KKLELNSVVYNSLIRAYCINGNMNA 659

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           A ++ ++ + +G+ ++ +TY +LM+GL
Sbjct: 660 AFRLRDDMKSRGVLLSCATYSSLMHGL 686



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/532 (29%), Positives = 266/532 (50%), Gaps = 17/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYN I+  L K G+L+E       M K+ + P+  TY++ ++G  KL  
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  V+  M++   +P+   YN LI+G+C  G + EA ++R +M S  + P+ VT N+
Sbjct: 342 IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +S +  +A  +++E+   G+  N  + +++I W C + +   A   +R M    
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+     TL+   CKAG   EA  +   +  KG   N +T N ++H LC    + E  
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETL 521

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +RG   D ++Y TLI+G  ++ K     +L +EM ++ I P  +T+N ++ GL
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + K ++A  + +E  ++G +P+  T+  +I G+C   +VE+     N++V K  + + 
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N L+   C  G +  A +       +G  +   TY++L+  LC    ++DA  LL E
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDE 701

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L P+   Y  I     + G++              K+N  V+Q  +S     I P
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMN-------------KVN-IVLQEMSS---HNIHP 744

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  +Y+  I+  C  G+ K+A ++  E  +KGI  +  TY    NGL K  K
Sbjct: 745 NKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGK 796



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 234/499 (46%), Gaps = 70/499 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +TY+  ++ L K  K++E   +L +M + G VPN   YN L+ GYCK+G + EA+++
Sbjct: 324 PSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNA-------GMLEE---------------------- 98
            D M      P+  T N LI G+C +        +LEE                      
Sbjct: 384 RDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443

Query: 99  ------AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                 A    +EM    L P+     TL++   ++G+  EA +L   L   G  PN VT
Sbjct: 444 KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVT 503

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            N +I   CK G + +  K++R+M E G   D +TYNTLI   CK G ++E F + + M 
Sbjct: 504 SNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMV 563

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA- 271
           +KG++ +  T N +LH LC   K+DEA  L +   K GY  +  +YG +I GY +  K  
Sbjct: 564 KKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVE 623

Query: 272 ----------------------------------NRALKLWDEMKERQIMPSTFTYNAMI 297
                                             N A +L D+MK R ++ S  TY++++
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLM 683

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL   G  + A  +L+E+ + G++P+   + TII G+   GQ+ K      +M   +  
Sbjct: 684 HGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+  T  I++ G C+ G  ++A K       KG   D+VTYN   + LCKE ++E+AF +
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803

Query: 418 LSEMEEKKLGPDRYTYAAI 436
             EM    +  D  TY  +
Sbjct: 804 CDEMSSGAVCLDEITYTTL 822



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 199/362 (54%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++    T++  L K GK  E  +L   +  +G VPN  T N L+ G CK G ++E +++
Sbjct: 464 PNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKL 523

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +   + D  TYN LI+G C  G ++E F L++EM    + PD+ T+N L++    
Sbjct: 524 LRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCN 583

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + +  EA +L  E  ++G  PN  T+ +MI  YCK  K+++   ++  +       + V 
Sbjct: 584 ADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVV 643

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI A C  GNM  AFR+ D M  +G+ ++  T ++++H LC    +D+A  LL+   
Sbjct: 644 YNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR 703

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + V Y T+I GY +  + N+   +  EM    I P+ FTY  MI G  + GKT+
Sbjct: 704 KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTK 763

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +LNE+ + G++PD  T+N   +G C EG+VE+A +  ++M   +   D +T   L+
Sbjct: 764 EAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823

Query: 368 SG 369
            G
Sbjct: 824 DG 825



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 214/402 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   +  +++ +++ L  K +       + +M  + L PN      LVSG CK G 
Sbjct: 422 MIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGK 481

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +   +     +P++ T N LI+G C AG ++E  +L ++M    L+ D +TYNT
Sbjct: 482 QGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNT 541

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+  E F+L +E+ + GI+P+  T N+++   C   KID+A ++    ++NG
Sbjct: 542 LISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNG 601

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+  TY  +ID  CKA  +EE   +++ +  K L++N++  N+++   C    ++ A+
Sbjct: 602 YVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAF 661

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    RG  L   +Y +L+ G       + A  L DEM++  ++P+   Y  +I G 
Sbjct: 662 RLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGY 721

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+  +   +L E+    + P++ T+  +I GFC  G+ ++A +  N+M EK   PD 
Sbjct: 722 SKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDA 781

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           VT N   +GLC+EG +E+A K           +D +TY TLI
Sbjct: 782 VTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 188/332 (56%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G +P+ VT N ++  L K G + E   LL DM ++GLV +R TYN L+SG CK G +K
Sbjct: 494 GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVK 553

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           E   + + M +    PD++T+N+L++G CNA  ++EA RL  E +    +P+V TY  +I
Sbjct: 554 EGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + + ++ +  E   L++EL    ++ N+V +N +I+ YC  G ++ A ++  +M+  G  
Sbjct: 614 DGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
             C TY++L+   C  G +++A  ++D M ++GL  N +   TI+       ++++  ++
Sbjct: 674 LSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIV 733

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L   S    + ++ +Y  +I G+ +  K   A KL +EM E+ I+P   TYNA   GL +
Sbjct: 734 LQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCK 793

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            GK E+A  + +E+    +  DE T+ T+I G
Sbjct: 794 EGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 151/298 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + D +TYNT++    K+GK+ E  +L  +M K+G+ P+  T+N+L+ G C    + EA
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+     +N  +P+V+TY ++I+G+C A  +EE   L  E+ S KL  + V YN+LI  
Sbjct: 591 SRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRA 650

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G    AF+L D++   G+  +  T++ ++   C  G +D A  ++  M + G  P+
Sbjct: 651 YCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPN 710

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y T+I    K G M +   ++  M    +  N  T   ++   C   K  EA  LLN
Sbjct: 711 VVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLN 770

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
             +++G   D V+Y     G  ++ K   A K+ DEM    +     TY  +I G  Q
Sbjct: 771 EMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 195/413 (47%), Gaps = 25/413 (6%)

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK---IDKACKIVRNMEEN 179
           +R FE  + M  F L+ E    G+K      ++++  Y  + K      A  +   + + 
Sbjct: 161 SRHFEIAQIMADFNLVFE-PVIGVK----IADLLVHVYSTQFKHLGFGFAADVFSLLAKK 215

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P   T   L+ +  KA  +++++ + D +   G+  +    +T+++  C   + D+A
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L +   K G   + V+Y  +I G  +  + + A +  ++M + ++ PS  TY+  I G
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  K ++A  +L E+ + G +P+E  +NT+I G+C  G + +AL+  + M+ K   P+
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+ G C+   + +A       I +G  ++  +++ +I+ LC + R   A   + 
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIR 455

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  + L P+      + + L ++G+  EA +    ++  G +                 
Sbjct: 456 EMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFV----------------- 498

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P+ ++ +  I+  C  G  ++ L++  +  ++G+  ++ TY  L++G  K  K
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 241/456 (52%), Gaps = 1/456 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P+   +N +L AL K+G + E   LL  + ++G+  N  TYNI + G C+ G L EA+R
Sbjct: 183 FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR 242

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +VD M +  ++PDV TYN LI G C   M +EA    + M +   LPD  TYNT+I+ + 
Sbjct: 243 LVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYC 301

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     EA +L+ +    G  P+ VT+  +I   C EG +++A ++    +  G  PD V
Sbjct: 302 KISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 361

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN+L+   C  G +  A ++M+ M  +G   +  T N +++ LC    + +A +++N A
Sbjct: 362 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 421

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +GY  D  ++ TLI GY +  K + AL+L + M E  I P T TYN+++ GL ++GK 
Sbjct: 422 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 481

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +  +   E++  G  P+  T+N +I  FC   ++E+A +   KM ++   PD V+ N L
Sbjct: 482 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 541

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G CR G LE A   F+    KG +  + T+NTLI +   +  +  A  +  EM  K  
Sbjct: 542 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 601

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             D YTY  +     ++  ++ A      M++ G I
Sbjct: 602 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 637



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/451 (33%), Positives = 228/451 (50%), Gaps = 1/451 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN  +  L + G+L E   L+  M+    VP+  TYN L+ G CK    +EAM  +  M
Sbjct: 223 TYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                LPD +TYN +I+G+C   M++EA  L K+      +PD VTY +LIN     G  
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A +L +E    GIKP+ V +N ++K  C +G I  A +++  M E G  PD  TYN +
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  CK GN+ +A  +M+    KG   +  T NT++   C   KLD A  L+    + G 
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y +++ G  +  K N   + + EM  +   P+  TYN +I    +S K E+A  
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ ++ Q G+ PD  +FNT+I+GFC  G +E A     K+ EK +     T N L+    
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
            +  +  A K F   + KG   DS TY  LI   CK   ++ A+  L EM +K   P   
Sbjct: 582 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 641

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           T+  +  +L  + R+ +A     IMV+ G +
Sbjct: 642 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 672



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 262/560 (46%), Gaps = 49/560 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC---- 56
           M+ F C P    YN I+DAL      ++   +   M   G+ P+  T+ I +  +C    
Sbjct: 76  MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 135

Query: 57  ---------------------------KLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING 89
                                        G   +A ++ D M      P++  +N +++ 
Sbjct: 136 PHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHA 195

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C  G + EA  L  ++    +  ++ TYN  I    E+GR  EA +L+D +  + + P+
Sbjct: 196 LCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD 254

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+N +I+  CK+    +A   +R M   G  PD  TYNT+ID  CK   ++EA  ++ 
Sbjct: 255 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 314

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
               KG   + +T  ++++ LC E  ++ A  L N A  +G   D V Y +L+ G     
Sbjct: 315 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 374

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               AL++ +EM E    P   TYN +I GL + G    A  ++N+ +  G +PD  TFN
Sbjct: 375 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I G+C   +++ ALQ   +M E    PD +T N +L+GLC+ G + +  + F+  ILK
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + +TYN LI + C+  ++E+A  ++ +M ++ L PD  ++  +      +G LE A
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 + E G           S T +  +    ++S K+N H ++       +IF+E  
Sbjct: 555 YLLFQKLEEKGY----------SATADTFNTLIGAFSGKLNMHMAE-------KIFDEML 597

Query: 510 QKGIAINKSTYMNLMNGLIK 529
            KG   +  TY  L++G  K
Sbjct: 598 SKGHRADSYTYRVLIDGSCK 617



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 217/423 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD VTYNT++  L KK    E    L  M  QG +P+  TYN ++ GYCK+  ++EA  
Sbjct: 252 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 311

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++        +PD  TY  LING C  G +E A  L  E ++  + PD+V YN+L+    
Sbjct: 312 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 371

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G  + A ++++E+ E G  P+  T+NI+I   CK G I  A  ++ +    G+ PD  
Sbjct: 372 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 431

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+NTLID  CK   ++ A ++++ M   G+  +TIT N++L+ LC   K++E        
Sbjct: 432 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 491

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + + ++Y  LI  + R  K   A K+  +M +  + P   ++N +I+G  ++G  
Sbjct: 492 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 551

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A  +  +L + G      TFNT+I  F  +  +  A +  ++M+ K  + D  T  +L
Sbjct: 552 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 611

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+   +++A       I KG      T+  +I+SL    R+  A G++  M +  +
Sbjct: 612 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 671

Query: 427 GPD 429
            P+
Sbjct: 672 VPE 674



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 189/366 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD+ TYNTI+D   K   + E  +LL D   +G VP++ TY  L++G C  G ++ A
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +        PD+  YN L+ G C  G++  A ++  EM      PD+ TYN +IN 
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A  ++++    G  P+  T N +I  YCK  K+D A ++V  M E G +PD
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN++++  CKAG + E       M  KG   N IT N ++   C   K++EA  ++ 
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+ G + D VS+ TLI G+ R+     A  L+ +++E+    +  T+N +I   S   
Sbjct: 525 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 584

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A  + +E+L  G   D  T+  +I G C    V++A     +M++K F P + T  
Sbjct: 585 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 644

Query: 365 ILLSGL 370
            +++ L
Sbjct: 645 RVINSL 650



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 239/529 (45%), Gaps = 50/529 (9%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y   +  Y + G L++A+   + M      P    YN +++   +A   ++A ++   M 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 108 SLKLLPDV-------------------------------VTYNTLINRFFESGRSMEAFK 136
           +  + PD+                               V Y T++   +  G + +A +
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L D++    + PN    N ++   CK G + +A  ++  + + G S +  TYN  I   C
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           +AG + EA R++D M R     + +T NT++  LC +    EA   L     +G   D+ 
Sbjct: 233 EAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y T+I GY +      A +L  +   +  +P   TY ++I GL   G  E+A+++ NE 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G+ PD   +N+++ G C +G +  ALQ  N+M E+   PDI T NI+++GLC+ G +
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             A       I+KG   D  T+NTLI   CK  +L+ A  L+  M E  + PD  TY ++
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 437 HTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSK--------------TPEEI 478
              L ++G++ E  +    M+  G     I + ++  N  +              + E +
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            P ++S++  I   C  G  + A  +F++  +KG +    T+  L+   
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 580



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 199/357 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY ++++ L  +G +    +L ++ + +G+ P+   YN LV G C  G +  A
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V++ M +    PD+ TYN++ING C  G + +A  +  +      LPDV T+NTLI+ 
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  +   A +L++ + E+GI P+ +T+N ++   CK GK+++  +  + M   G  P+
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI+  C++  MEEA +++  M ++GL  + ++ NT+++  C    L+ AY+L  
Sbjct: 500 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 559

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++GY     ++ TLI  +      + A K++DEM  +     ++TY  +I G  ++ 
Sbjct: 560 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTA 619

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             ++A   L E+++ G IP  +TF  +I+      +V +A+   + MV+    P++V
Sbjct: 620 NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 211/450 (46%), Gaps = 22/450 (4%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y   I  +  AG L +A    + M+     P    YN +++   ++    +A K+   + 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
             G+ P+  TH I ++ +C   +   A +++R +   G     V Y T++      G+  
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 168

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A ++ D M    +  N    N +LH LC    + EA +LL    +RG  ++  +Y   I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G     +   A++L D M+   + P   TYN +I GL +    ++A+  L  ++  G +
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD+ T+NTII G+C    V++A +     V K F PD VT   L++GLC EG +E+AL+ 
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F     KG   D V YN+L+  LC +  +  A  +++EM E+   PD  TY  +   L +
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G + +A    +  +  G +                 P   +++  I+ +C + +   AL
Sbjct: 408 MGNISDATVVMNDAIMKGYL-----------------PDVFTFNTLIDGYCKRLKLDSAL 450

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Q+ E   + GIA +  TY +++NGL K  K
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGK 480



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 137/257 (53%), Gaps = 8/257 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  PD +TYN++L+ L K GK+NEV +   +M  +G  PN  TYNIL+  +C+   ++E
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A +V+  M+Q    PD  ++N LI G+C  G LE A+ L +++E         T+NTLI 
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 578

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F        A K+ DE+   G + ++ T+ ++I   CK   +D+A   +  M + GF P
Sbjct: 579 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              T+  +I++      + +A  ++ +M + G+    +  +TIL+    +K++    +L+
Sbjct: 639 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNAD--KKEIAAPKILV 694

Query: 244 NSASKRGYYLDEVSYGT 260
               K+G+    +SY T
Sbjct: 695 EDLMKKGH----ISYPT 707


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 247/466 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ V  N +++   + G +     + + + K G VP+  T+  L+ G C  G 
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A    D +       D  +Y  LI+G C  G    A  L + ++   + P+VV YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EAF L  E+   GI P+ VT++ +I  +C  GK++ A  +   M    
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+N L++A CK G M+E   + D+M ++G+K N +T N+++   C  K++++A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N+ ++ G   D  SY  +I G+ + +K + A+ L+ EM  + I+P   TY+++I GL
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+SG+   A+ +++++   G+ P   T+N+I+   C   QV+KA+    K+ +K  +P++
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNM 470

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T +IL+ GLC+ G LE A K F   ++KG  ++  TY  +I   C E    +A  LLS+
Sbjct: 471 YTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           ME+    PD  TY  I  +L +    + A+K    M+  G    Q+
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 213/451 (47%), Gaps = 20/451 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           +++A  L   +      P    +N ++    +S        L  +++  GIKPN V  NI
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C+ G I  A  +   + + G+ PD +T+ TLI   C  G +++AF   D +   G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              + I+  T++H LC   +   A  LL          + V Y T+I    + +  N A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L+ EM  + I P   TY+A+I G    GK   AID+ N+++   + PD  TFN +++ F
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C +G++++     + M+++  KP+ VT N L+ G C    + KA   F +    G   D 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA------ 449
            +Y+ +I+  CK ++ ++A  L  EM  K + PD  TY+++   L +SGR+  A      
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 450 ----------QKFTSIMVETGKINHQV---VQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                     + + SI+    KI HQV   +   T    + I P+  +YS  I   C  G
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKI-HQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           + +DA ++FE    KG  +N  TY  ++ G 
Sbjct: 485 KLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 184/416 (44%), Gaps = 52/416 (12%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           + ++Y++    F  +    +A  L + L      P A   N ++    K         + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           + ME  G  P+ V  N LI+  C+ G +  AF +   + + G   +TIT  T++  LC +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++ +A++  +     G++ D++SYGTLI                               
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLI------------------------------- 197

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
                GL + G+T  A+D+L  +  + + P+   +NTII   C    V +A    ++M+ 
Sbjct: 198 ----HGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMIS 253

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           K   PD+VT + L+SG C  G L  A+  F   IL+    D  T+N L+++ CK+ ++++
Sbjct: 254 KGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKE 313

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
              +   M ++ + P+  TY ++         + +A+   + M + G             
Sbjct: 314 GKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG------------- 360

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               ++P   SYS  IN  C   ++ +A+ +F+E  +K I  +  TY +L++GL K
Sbjct: 361 ----VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 130/286 (45%), Gaps = 70/286 (24%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N +++A  K GK+ E + +   M KQG+ PN  TYN L+ GYC +  + +A  +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M Q    PD+ +Y+++ING+C     +EA  L KEM    ++PDVVTY++LI+   +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412

Query: 128 SGRSMEAFKLID-----------------------------------ELDEHGIKPNAVT 152
           SGR   A +L+D                                   +L + GI+PN  T
Sbjct: 413 SGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYT 472

Query: 153 ----------------------------HN-------IMIKWYCKEGKIDKACKIVRNME 177
                                       HN       IMI+ +C EG  ++A  ++  ME
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKME 532

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           +NG  PD  TY  +I +  K    + A +++  M  +G++   I +
Sbjct: 533 DNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAI 578


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 268/523 (51%), Gaps = 20/523 (3%)

Query: 7   LP-DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP D V YNT++    + G+++  R +L  MK+ G+ PN  TY   +  YC+   ++EA 
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M +N  L DV T + L+ G C  G   EA+ L +EM+ +   P+ VTY TLI+  
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++GR  E   L+ E+   G+  + VT+  ++ W  K+GK D+    +R    +  SP+ 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY  LIDA CKA N++EA +++  M  K +  N +T +++++       LD+A      
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG   + V+YGTLI G+F+ +  + AL+++ +M    +  + F  ++++ GL Q+GK
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A+ +  +   SG+  D   + T+I G    G +  A +F  ++++++  PD V  N+
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            ++ LC  G  ++A  F       G   D  TYNT+I S C++     A  LL EM+   
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P+  TY  +   L  +G +E+A+   + MV  G                   PSS+++
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-----------------FSPSSLTH 662

Query: 486 SEKINEHCSQGRYKDA-LQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ + CSQ R  D  L I E     G+  + + Y  L+  L
Sbjct: 663 -RRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 257/525 (48%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + D VTY  ++D L K+GK +EV+D L       L PN  TY +L+   CK   + EA
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+  M +    P+V T++ +ING+   G+L++A   ++ M+   + P+VVTY TLI+ 
Sbjct: 399 EQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+      A ++  ++   G+K N    + ++    + GKI++A  + ++   +G S D
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLD 518

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TLID   KAG+M  AF+    +  + +  + +  N  ++ LC   K  EA   L 
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLT 578

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y T+I  + R  +  +ALKL  EMK   I P+  TYN ++ GL  +G
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  +LNE++ +G  P   T   ++       +++  L  H  M+      DI   N
Sbjct: 639 AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  LC  G+  KA       +  G A D++T+N LI   CK   L++AF   ++M  +
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  T+  +   L   GR+ EA    ++++E  K                ++P++++
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAG---TVLIEMEK--------------SGLEPNNLT 801

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y      H  Q    +A++++ E   KG     STY  L++   K
Sbjct: 802 YDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 251/523 (47%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D VT + ++  L + G+ +E   L  +M K G  PN  TY  L+    K G  KE 
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M     + D+ TY  L++     G  +E     +   S  L P+ VTY  LI+ 
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    EA +++ E++E  I PN VT + +I  + K G +DKA +  R M+E G +P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TLID   K    + A  +   M  +G+K+N   ++++++ L    K++EA  L  
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            AS  G  LD V+Y TLI G F+      A K   E+ +R ++P    YN  I  L   G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLG 568

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A   L E+   G+ PD++T+NT+I   C +G+  KAL+  ++M   S KP+++T N
Sbjct: 569 KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++GL   G +EKA       +  G +  S+T+  ++ +  + RRL+    +   M   
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  D   Y  +   L   G   +A      M+ +G                 I P +I+
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG-----------------IAPDTIT 731

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           ++  I  HC      +A   + +   + I+ N +T+  L+ GL
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 212/439 (48%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           +++++ L + GK+ E   L  D    GL  +   Y  L+ G  K G +  A +    +  
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
              LPD   YN+ IN  C  G  +EA     EM ++ L PD  TYNT+I      G + +
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A KL+ E+    IKPN +T+N ++      G ++KA  ++  M   GFSP  +T+  ++ 
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A  ++  ++    + + M   GL  +    NT+L  LC      +A ++L      G   
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D +++  LI G+ +    + A   + +M  + I P+  T+N ++ GL   G+  +A  +L
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E+ +SG+ P+  T++ +  G   +    +A++ + +MV K F P + T N L+S   + 
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++ +A + F+    +G    S TY+ L+S   + R   +    L +M+EK   P + T 
Sbjct: 848 GMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTL 907

Query: 434 AAIHTALVESGRLEEAQKF 452
           + I  A  + G   +AQ+ 
Sbjct: 908 SFICRAFSKPGMTWQAQRL 926



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 227/488 (46%), Gaps = 35/488 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY  ++DAL K   ++E   +L +M+++ + PN  T++ +++G+ K G L +A   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 68  VDLMTQNKSLPDVWTYNMLINGW-----------------CNA----------------- 93
             +M +    P+V TY  LI+G+                 C                   
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 94  -GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G +EEA  L K+     L  D V Y TLI+  F++G    AFK   EL +  + P+AV 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N+ I   C  GK  +A   +  M   G  PD  TYNT+I ++C+ G   +A +++  M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              +K N IT NT++  L     +++A  LLN     G+    +++  ++    +  + +
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             L + + M    +      YN ++  L   G T +A  +L E+L SG+ PD  TFN +I
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G C    ++ A   + +M+ ++  P+I T N LL GL   G + +A          G  
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +++TY+ L +   K+    +A  L  EM  K   P   TY A+ +   ++G + +A++ 
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 453 TSIMVETG 460
              M + G
Sbjct: 857 FKDMQKRG 864



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 35/351 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT++ +  +KG+  +   LL +MK   + PN  TYN LV+G    G 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 61  LKEA-------------------MRVVDLMTQNKSL----------------PDVWTYNM 85
           +++A                    RV+   +Q++ L                 D+  YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+   C  GM  +A  + +EM    + PD +T+N LI    +S     AF    ++    
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I PN  T N ++      G+I +A  ++  ME++G  P+ +TY+ L   + K  N  EA 
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R+   M  KG      T N ++        + +A  L     KRG +    +Y  L++G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            R        K   +MKE+   PS  T + +    S+ G T QA  +L  L
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 117/288 (40%), Gaps = 28/288 (9%)

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L +A+ R    D  S   L+  + R      A+ L      R   P+T  YN ++  LS 
Sbjct: 61  LAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSD 115

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
                 A  +L E+ + G+  D  T NT++ G C  GQV+ A             P + +
Sbjct: 116 HA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA--LADRAGGITPWMSS 170

Query: 363 CNIL-LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
              L L  +   G    AL        +G  +D V YNTL++  C+  +++ A G+L  M
Sbjct: 171 AGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           +E  + P+  TY         +  +EEA      MV  G +               +D  
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL---------------LD-- 273

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            ++ S  +   C  GR+ +A  +F E  + G A N  TY  L++ L K
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 268/523 (51%), Gaps = 20/523 (3%)

Query: 7   LP-DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP D V YNT++    + G+++  R +L  MK+ G+ PN  TY   +  YC+   ++EA 
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M +N  L DV T + L+ G C  G   EA+ L +EM+ +   P+ VTY TLI+  
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++GR  E   L+ E+   G+  + VT+  ++ W  K+GK D+    +R    +  SP+ 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY  LIDA CKA N++EA +++  M  K +  N +T +++++       LD+A      
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG   + V+YGTLI G+F+ +  + AL+++ +M    +  + F  ++++ GL Q+GK
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A+ +  +   SG+  D   + T+I G    G +  A +F  ++++++  PD V  N+
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            ++ LC  G  ++A  F       G   D  TYNT+I S C++     A  LL EM+   
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P+  TY  +   L  +G +E+A+   + MV  G                   PSS+++
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-----------------FSPSSLTH 662

Query: 486 SEKINEHCSQGRYKDA-LQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ + CSQ R  D  L I E     G+  + + Y  L+  L
Sbjct: 663 -RRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 257/525 (48%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + D VTY  ++D L K+GK +EV+D L       L PN  TY +L+   CK   + EA
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+  M +    P+V T++ +ING+   G+L++A   ++ M+   + P+VVTY TLI+ 
Sbjct: 399 EQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+      A ++  ++   G+K N    + ++    + GKI++A  + ++   +G S D
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLD 518

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TLID   KAG+M  AF+    +  + +  + +  N  ++ LC   K  EA   L 
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLT 578

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y T+I  + R  +  +ALKL  EMK   I P+  TYN ++ GL  +G
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  +LNE++ +G  P   T   ++       +++  L  H  M+      DI   N
Sbjct: 639 AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  LC  G+  KA       +  G A D++T+N LI   CK   L++AF   ++M  +
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  T+  +   L   GR+ EA    ++++E  K                ++P++++
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAG---TVLIEMEK--------------SGLEPNNLT 801

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y      H  Q    +A++++ E   KG     STY  L++   K
Sbjct: 802 YDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 251/523 (47%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D VT + ++  L + G+ +E   L  +M K G  PN  TY  L+    K G  KE 
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M     + D+ TY  L++     G  +E     +   S  L P+ VTY  LI+ 
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    EA +++ E++E  I PN VT + +I  + K G +DKA +  R M+E G +P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TLID   K    + A  +   M  +G+K+N   ++++++ L    K++EA  L  
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            AS  G  LD V+Y TLI G F+      A K   E+ +R ++P    YN  I  L   G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLG 568

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A   L E+   G+ PD++T+NT+I   C +G+  KAL+  ++M   S KP+++T N
Sbjct: 569 KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++GL   G +EKA       +  G +  S+T+  ++ +  + RRL+    +   M   
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  D   Y  +   L   G   +A      M+ +G                 I P +I+
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG-----------------IAPDTIT 731

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           ++  I  HC      +A   + +   + I+ N +T+  L+ GL
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 251/556 (45%), Gaps = 56/556 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V YN +L AL        V   L++M K+G+  +  T N L++G C+ G +  A  +
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D      +L DV  +N LI G+C  G    A  +   M +  L  DVV YNTL+  F  
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY--------------------------- 160
           +G+   A  ++D + E G+ PN  T+   I +Y                           
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 161 --------CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                   C++G+  +A  + R M++ G +P+ VTY TLID+  KAG  +E   ++  M 
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G+ M+ +T   ++  L  + K DE    L  A       + V+Y  LI    +    +
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A ++  EM+E+ I P+  T++++I G  + G  ++A +    + + G+ P+  T+ T+I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            GF      + AL+ ++ M+ +  K +    + L++GL + G +E+A+  F+     G +
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +D V Y TLI  L K   +  AF    E+ ++ + PD   Y      L   G+ +EA+ F
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
            + M   G                 + P   +Y+  I  HC +G    AL++  E +   
Sbjct: 577 LTEMRNMG-----------------LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 513 IAINKSTYMNLMNGLI 528
           I  N  TY  L+ GL 
Sbjct: 620 IKPNLITYNTLVAGLF 635



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 257/576 (44%), Gaps = 73/576 (12%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY  ++DAL K   ++E   +L +M+++ + PN  T++ +++G+ K G L +A   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 68  VDLMTQNKSLPDVWTYNMLINGW-----------------CNA----------------- 93
             +M +    P+V TY  LI+G+                 C                   
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 94  -GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G +EEA  L K+     L  D V Y TLI+  F++G    AFK   EL +  + P+AV 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N+ I   C  GK  +A   +  M   G  PD  TYNT+I ++C+ G   +A +++  M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              +K N IT NT++  L     +++A  LLN     G+    +++  ++    +  + +
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             L + + M    +      YN ++  L   G T +A  +L E+L SG+ PD  TFN +I
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G C    ++ A   + +M+ ++  P+I T N LL GL   G + +A          G  
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +++TY+ L +   K+    +A  L  EM  K   P   TY A+ +   ++G + +A++ 
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN-------EHCSQGRYKDALQIF 505
              M + G                 + P+S +Y   ++       E  SQ  Y   +  F
Sbjct: 857 FKDMQKRG-----------------VHPTSCTYDILVSGWYDLAREQKSQNTYFTEIYCF 899

Query: 506 EETR-QKGIAINK--------STY-----MNLMNGL 527
             +R Q  IAI++        S Y     MN +NGL
Sbjct: 900 SASRHQSKIAISRVNLALQFMSLYLNGPKMNWLNGL 935



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 26/287 (9%)

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L +A+ R    D  S   L+  + R      A+ L      R   P+T  YN ++  LS 
Sbjct: 61  LAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSD 115

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
                 A  +L E+ + G+  D  T NT++ G C  GQV+ A    ++        D++ 
Sbjct: 116 HA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG-GGIHALDVIG 171

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L++G CR G    AL        +G  +D V YNTL++  C+  +++ A G+L  M+
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E  + P+  TY         +  +EEA      MV  G +               +D   
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL---------------LD--V 274

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++ S  +   C  GR+ +A  +F E  + G A N  TY  L++ L K
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 161/540 (29%), Positives = 274/540 (50%), Gaps = 23/540 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TY  ++D   K+G + E   +  +M  +GL  N  TYN ++ G  K G 
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM + + M      PD WTYN+LI+G+  +  + +A  L  EM++ KL P   TY+ 
Sbjct: 397 MAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    S    +A +++D++  +G+KPN   +  +IK Y +E + + A ++++ M  NG
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   YN LI   C+A  +EEA  ++  MG KG+K N  T    ++      ++  A 
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G   + V Y  LI G+        AL  +  M E+ ++P    Y+A+I  L
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++GKT++A+ +  + L++G++PD   +N++I GFC EG +EKA Q +++M+     P+I
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696

Query: 361 VTCNILLS--GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           V  N L++  G C+ G L +A K F   I KG + D   Y  LI    KE  LE A  L 
Sbjct: 697 VVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 756

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            E ++K +G     + ++  +  + G++ EA++    MV+                 +++
Sbjct: 757 HEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVD-----------------KKL 798

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM---NGLIKRRKSIS 535
            P+ ++Y+  I+ +      ++A Q+F +   + I  N  TY +L+   N +  R K IS
Sbjct: 799 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 858



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 257/531 (48%), Gaps = 20/531 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+  TYN  +  L + G ++E  ++   M ++GL P+  TY +LV G+CK    KEA 
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M  +   P+ +TY  LI+G+   G +EEA R++ EM +  L  +VVTYN +I   
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++G   +A  L +E+   GI+P+  T+N++I  Y K   + KAC+++  M+    +P  
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY+ LI   C + ++++A  ++D M R G+K N     T++     E + + A  LL  
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G   D   Y  LI G  R +K   A  L  +M E+ I P+  TY A I   S+SG+
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A     ++L SG++P+   +  +I G C  G   +AL     M+EK   PDI   + 
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++  L + G  ++A+  F  ++  G   D   YN+LIS  CKE  +E A  L  EM    
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 426 LGPDRYTYAAI--HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + P+   Y  +       +SG L EA K    M+  G                 I P   
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG-----------------ISPDGY 734

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Y   I+    +G  + AL +F E +QK +  + S + +L++   K  K I
Sbjct: 735 IYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVI 784



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 259/561 (46%), Gaps = 55/561 (9%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL--- 58
           EGF   P  +  N ++  L K   +     +   M +  +VP+  TY  ++  +CK+   
Sbjct: 201 EGF--FPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258

Query: 59  -------------------------------GWLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
                                          G + EA+ V  LM +    PD  TY +L+
Sbjct: 259 IKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLV 318

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +G+C     +EA  + + M S  L P+  TY  LI+ F + G   EA ++ DE+   G+K
Sbjct: 319 DGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLK 378

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
            N VT+N MI    K G++ KA  +   M   G  PD  TYN LID   K+ +M +A  +
Sbjct: 379 LNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACEL 438

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +  M  + L  +  T + ++  LC    L +A  +L+   + G   +   YGTLI  Y +
Sbjct: 439 LAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + +   A++L   M    ++P  F YN +I GL ++ K E+A  +L ++ + G+ P+  T
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +   I+ +   G+++ A ++   M+     P+ V   IL+ G C  G   +AL  F+  +
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            KG   D   Y+ +I SL K  + ++A G+  +  +  + PD + Y ++ +   + G +E
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE--HCSQGRYKDALQIF 505
           +A +    M+  G                 I+P+ + Y+  IN+  +C  G   +A ++F
Sbjct: 679 KASQLYDEMLHNG-----------------INPNIVVYNTLINDYGYCKSGNLTEAFKLF 721

Query: 506 EETRQKGIAINKSTYMNLMNG 526
           +E   KGI+ +   Y  L++G
Sbjct: 722 DEMISKGISPDGYIYCILIDG 742



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 241/482 (50%), Gaps = 3/482 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD   YN ++  L +  K+ E + LL DM ++G+ PN  TY   ++ Y K G ++ A
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVA 575

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R    M  +  +P+   Y +LI G C+ G   EA    K M    L+PD+  Y+ +I+ 
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G++ EA  +  +  + G+ P+   +N +I  +CKEG I+KA ++   M  NG +P+
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695

Query: 185 CVTYNTLID--ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            V YNTLI+    CK+GN+ EAF++ D M  KG+  +      ++     E  L++A  L
Sbjct: 696 IVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 755

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            + A ++       ++ +LI  + +  K   A +L+D+M ++++ P+  TY  +I    +
Sbjct: 756 FHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 814

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +   E+A  +  ++    +IP+  T+ +++  +   G   K +     M  +    D + 
Sbjct: 815 AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 874

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             ++ S  C+EG   +ALK     +++G  ++   ++ LI  LCKE+++     LLSEM 
Sbjct: 875 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 934

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +++L     T   +     +SG  +EA K   +M   G +   +   ++  T  +   S 
Sbjct: 935 KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMKSD 994

Query: 483 IS 484
           IS
Sbjct: 995 IS 996



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 235/490 (47%), Gaps = 18/490 (3%)

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
           N T ++I +  +  LG+L EA  V          P +   N L+     A M+   +++ 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
             M   K++PDV TY  +I    + G  ++   ++ E+++   KPN  T+N  I   C+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQT 289

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           G +D+A ++ + M E G  PD  TY  L+D  CK    +EA  + + M   GL  N  T 
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
             ++     E  ++EA  + +    RG  L+ V+Y  +I G  +  +  +A+ L++EM  
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
             I P T+TYN +I G  +S    +A ++L E+    + P   T++ +I G C    ++K
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +  ++M+    KP++     L+    +E   E A++  +  I  G   D   YN LI 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            LC+ +++E+A  LL +M EK + P+ +TY A      +SG ++ A+++   M+ +G   
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG--- 586

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P+++ Y+  I  HC  G   +AL  F+   +KG+  +   Y  +
Sbjct: 587 --------------IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 524 MNGLIKRRKS 533
           ++ L K  K+
Sbjct: 633 IHSLSKNGKT 642



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME    +P+ +TY ++L +  + G   ++  L  DM+ +G+  +   Y ++ S YCK G 
Sbjct: 828 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887

Query: 61  LKEAMRVVDLMTQNKSLPDVW-----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
             EA++++     NKSL +        ++ LI   C    +     L  EM   +L    
Sbjct: 888 SLEALKLL-----NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 942

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            T NTL+  F++SG   EA K++  +   G  P +++
Sbjct: 943 KTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 979


>gi|357510345|ref|XP_003625461.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500476|gb|AES81679.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 395

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 137/308 (44%), Positives = 183/308 (59%), Gaps = 60/308 (19%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC PDNVTYNT+L AL K+ +L+++R  +                        L WLKE
Sbjct: 75  FGCCPDNVTYNTVLTALCKRSQLSKLRGFV------------------------LKWLKE 110

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ V +LMT N  LPDVWTYN ++ G C+ G ++EA RLR EMESL+L+PD VTYNTLI+
Sbjct: 111 AVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLID 170

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             FE   S  AFKL++E+   G+K NAVTHNIM+KW+CKEG +D+A   +  M E+GF  
Sbjct: 171 GCFEHQGSAAAFKLVEEMKSRGVKENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLL 230

Query: 184 DC--VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
               ++YN +I+  CKAG M +AF+MMD MGRKGLK +T TLNTIL+TLC EKKLD+   
Sbjct: 231 IVLLISYNMMINGYCKAGKMAKAFKMMDEMGRKGLKTDTFTLNTILYTLCLEKKLDD--- 287

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
                                           A  L  EM+   + P  +TY+A++  L+
Sbjct: 288 -------------------------------DAFDLMTEMEGIFLEPDQYTYSAIVCALT 316

Query: 302 QSGKTEQA 309
            +G+TE+A
Sbjct: 317 NAGRTEEA 324



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 149/305 (48%), Gaps = 39/305 (12%)

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E G  PD VTYNT++ A CK   +               K+    L          K L 
Sbjct: 74  EFGCCPDNVTYNTVLTALCKRSQLS--------------KLRGFVL----------KWLK 109

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  +    +      D  +Y T++ G   + K + A++L DEM+  +++P   TYN +I
Sbjct: 110 EAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLI 169

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  +   +  A  ++ E+   G+  +  T N ++  FC EG V++A     KM E  F 
Sbjct: 170 DGCFEHQGSAAAFKLVEEMKSRGVKENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFL 229

Query: 358 PDI--VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED-A 414
             +  ++ N++++G C+ G + KA K       KG   D+ T NT++ +LC E++L+D A
Sbjct: 230 LIVLLISYNMMINGYCKAGKMAKAFKMMDEMGRKGLKTDTFTLNTILYTLCLEKKLDDDA 289

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF------TSIMVETGKINHQVVQ 468
           F L++EME   L PD+YTY+AI  AL  +GR EEA+ F      + I V  G+       
Sbjct: 290 FDLMTEMEGIFLEPDQYTYSAIVCALTNAGRTEEAKLFGLIDNCSLIAVSPGRF------ 343

Query: 469 PNTSK 473
           P TSK
Sbjct: 344 PKTSK 348



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 5/214 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G   LPD  TYNT++  L  +GK++E   L  +M+   LVP+  TYN L+ G  +   
Sbjct: 118 MTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQG 177

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTY 118
              A ++V+ M       +  T+N+++  +C  G ++EA     +M      L+  +++Y
Sbjct: 178 SAAAFKLVEEMKSRGVKENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISY 237

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI-DKACKIVRNME 177
           N +IN + ++G+  +AFK++DE+   G+K +  T N ++   C E K+ D A  ++  ME
Sbjct: 238 NMMINGYCKAGKMAKAFKMMDEMGRKGLKTDTFTLNTILYTLCLEKKLDDDAFDLMTEME 297

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEA--FRMMD 209
                PD  TY+ ++ A   AG  EEA  F ++D
Sbjct: 298 GIFLEPDQYTYSAIVCALTNAGRTEEAKLFGLID 331



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 49/254 (19%)

Query: 143 EHGIKPNAV----------------------------------------------THNIM 156
           E G  P+ V                                              T+N M
Sbjct: 74  EFGCCPDNVTYNTVLTALCKRSQLSKLRGFVLKWLKEAVEVTELMTGNDMLPDVWTYNTM 133

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           ++  C EGKID+A ++   ME     PD VTYNTLID   +      AF++++ M  +G+
Sbjct: 134 VRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGV 193

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE--VSYGTLITGYFRDEKANRA 274
           K N +T N ++   C E  +DEA   +   S+ G+ L    +SY  +I GY +  K  +A
Sbjct: 194 KENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKA 253

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGK-TEQAIDMLNELLQSGMIPDETTFNTIIH 333
            K+ DEM  + +   TFT N +++ L    K  + A D++ E+    + PD+ T++ I+ 
Sbjct: 254 FKMMDEMGRKGLKTDTFTLNTILYTLCLEKKLDDDAFDLMTEMEGIFLEPDQYTYSAIVC 313

Query: 334 GFCSEGQVEKALQF 347
              + G+ E+A  F
Sbjct: 314 ALTNAGRTEEAKLF 327



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 31/213 (14%)

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-----------DSVTYNTLISSLC 406
           PD VT N +L+ LC+   L K   F   W+ +   V           D  TYNT++  LC
Sbjct: 79  PDNVTYNTVLTALCKRSQLSKLRGFVLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLC 138

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM----VETGKI 462
            E ++++A  L  EME  +L PD  TY  +     E      A K    M    V+   +
Sbjct: 139 DEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAV 198

Query: 463 NHQVV------QPNTSKTPEEIDPSS----------ISYSEKINEHCSQGRYKDALQIFE 506
            H ++      + N  +    +   S          ISY+  IN +C  G+   A ++ +
Sbjct: 199 THNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMMD 258

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           E  +KG+  +  T   ++  L   +K    A D
Sbjct: 259 EMGRKGLKTDTFTLNTILYTLCLEKKLDDDAFD 291


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 252/460 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +T N +++   + G +     + + + K+G  P+  T+ IL+ G C  G 
Sbjct: 84  MEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGE 143

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   D +       D  +Y  LING C  G  + A +L + ++   + P+VV Y+T
Sbjct: 144 VHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYST 203

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +AF L  E+    I P+ VT++ +I  +C  GK+  A  +   M  + 
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  T++ LID  CK G + EA  ++ VM +K +K++ +T N+++   C  K++++A 
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAK 323

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N  ++RG   D  SY  +I G+ + +  + A+KL++EM  +QI P+  TYN+++ GL
Sbjct: 324 SLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGL 383

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+T  A+++++E+   G   +  T+N+I+   C    V+KA+    K+ EK  +PDI
Sbjct: 384 CKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDI 443

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  +L++GLC+ G L+ A K F   ++KG + +  TY +LI+  C +   ++   +LS+
Sbjct: 444 FTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSK 503

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M++    P+  TY  +  +L E    ++A+K    M+  G
Sbjct: 504 MKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 239/461 (51%), Gaps = 17/461 (3%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+ +N  +P    +  ++     A   + A  L ++ME   + PD +T N L+N F + G
Sbjct: 48  LLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLG 107

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
               +F +  ++ + G  P+AVT  I+IK  C +G++ KA      +   GF  D V+Y 
Sbjct: 108 HIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYG 167

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI+  C+ G  + A +++  +  K ++ N +  +TI+ ++C +K +++A+ L      +
Sbjct: 168 TLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK 227

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               D V+Y +LI+G+    K   A+ L++ M    I P+ +T++ +I G  + GK  +A
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            ++L  +++  +  D  T+N+++ G+C   QV KA    N M ++   PD+ + +I+++G
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            C+  ++++A+K F     K    + VTYN+L+  LCK  R   A  L+ EM ++    +
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY +I  A+ ++  +++A      +V   KI  + +QP+             +Y+  I
Sbjct: 408 IITYNSILDAICKNNHVDKA------IVLLTKIKEKGIQPDI-----------FTYTVLI 450

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           N  C  GR  DA ++FE+   KG + N  TY +L+NG   +
Sbjct: 451 NGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNK 491



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 164/280 (58%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T++ ++D   K+GK+ E +++L+ M K+ +  +  TYN L+ GYC +  + +A  +
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            ++M Q    PDVW+Y+++ING+C   M++EA +L +EM   ++ P+VVTYN+L++   +
Sbjct: 326 FNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCK 385

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR+  A +L+DE+ + G   N +T+N ++   CK   +DKA  ++  ++E G  PD  T
Sbjct: 386 SGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT 445

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LI+  CK G +++A ++ + +  KG   N  T  ++++  C +   DE   +L+   
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             G   + ++Y  LI   F  ++ ++A KL  EM  R ++
Sbjct: 506 DNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 170/315 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY++++      GKL    DL + M    + PN  T++IL+ G+CK G ++EA  V
Sbjct: 231 PDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNV 290

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M +     DV TYN L++G+C    + +A  L   M    + PDV +Y+ +IN F +
Sbjct: 291 LAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCK 350

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                EA KL +E+    I PN VT+N ++   CK G+   A ++V  M + G   + +T
Sbjct: 351 IKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIIT 410

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+++DA CK  ++++A  ++  +  KG++ +  T   +++ LC   +LD+A  +     
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +GY  +  +Y +LI G+      +  L +  +MK+   +P+  TY  +I  L +  + +
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEND 530

Query: 308 QAIDMLNELLQSGMI 322
           +A  +L E++  G++
Sbjct: 531 KAEKLLREMIARGLL 545



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 52/386 (13%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P A+    ++    K  +   A  + + ME NG  PD +T N L++   + G+++ +F +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
              + +KG   + +T   ++  LC + ++ +A    +    +G+ LD+VSYGT       
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT------- 168

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
                                       +I GL + G+T+ A+ +L  +    + P+   
Sbjct: 169 ----------------------------LINGLCRVGETKAAVQLLRRVDGKLVRPNVVM 200

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           ++TII   C +  V  A   + +MV K   PD+VT + L+SG C  G L+ A+  F   I
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
                 +  T++ LI   CKE ++ +A  +L+ M +K +  D  TY ++        ++ 
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A+   ++M + G                 + P   SYS  IN  C      +A+++FEE
Sbjct: 321 KAKSLFNVMAQRG-----------------VTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKS 533
              K I  N  TY +L++GL K  ++
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRT 389



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 110/212 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  +Y+ +++   K   ++E   L  +M  + + PN  TYN LV G CK G    A
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCA 392

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +VD M       ++ TYN +++  C    +++A  L  +++   + PD+ TY  LIN 
Sbjct: 393 LELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A K+ ++L   G  PN  T+  +I  +C +G  D+   ++  M++NG  P+
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
            +TY  LI +  +    ++A +++  M  +GL
Sbjct: 513 AITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 17/246 (6%)

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           +P    +  ++  L ++ + + A+ +  ++  +G+ PD  T N +++ F   G ++ +  
Sbjct: 55  IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              K+++K + PD VT  IL+ GLC +G + KAL F    + +G  +D V+Y TLI+ LC
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +    + A  LL  ++ K + P+   Y+ I  ++ +   + +A      MV         
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS-------- 226

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                    + I P  ++YS  I+  C  G+ K A+ +F       I  N  T+  L++G
Sbjct: 227 ---------KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277

Query: 527 LIKRRK 532
             K  K
Sbjct: 278 FCKEGK 283



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 59/108 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TY  +++ L K G+L++ + +  D+  +G  PN  TY  L++G+C  G+  E 
Sbjct: 438 GIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEG 497

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
           + ++  M  N  +P+  TY +LI+        ++A +L +EM +  LL
Sbjct: 498 LAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 268/523 (51%), Gaps = 20/523 (3%)

Query: 7   LP-DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP D V YNT++    + G+++  R +L  MK+ G+ PN  TY   +  YC+   ++EA 
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M +N  L DV T + L+ G C  G   EA+ L +EM+ +   P+ VTY TLI+  
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++GR  E   L+ E+   G+  + VT+  ++ W  K+GK D+    +R    +  SP+ 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY  LIDA CKA N++EA +++  M  K +  N +T +++++       LD+A      
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG   + V+YGTLI G+F+ +  + AL+++ +M    +  + F  ++++ GL Q+GK
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A+ +  +   SG+  D   + T+I G    G +  A +F  ++++++  PD V  N+
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            ++ LC  G  ++A  F       G   D  TYNT+I S C++     A  LL EM+   
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P+  TY  +   L  +G +E+A+   + MV  G                   PSS+++
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-----------------FSPSSLTH 662

Query: 486 SEKINEHCSQGRYKDA-LQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ + CSQ R  D  L I E     G+  + + Y  L+  L
Sbjct: 663 -RRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 257/525 (48%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + D VTY  ++D L K+GK +EV+D L       L PN  TY +L+   CK   + EA
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+  M +    P+V T++ +ING+   G+L++A   ++ M+   + P+VVTY TLI+ 
Sbjct: 399 EQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+      A ++  ++   G+K N    + ++    + GKI++A  + ++   +G S D
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLD 518

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TLID   KAG+M  AF+    +  + +  + +  N  ++ LC   K  EA   L 
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLT 578

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y T+I  + R  +  +ALKL  EMK   I P+  TYN ++ GL  +G
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  +LNE++ +G  P   T   ++       +++  L  H  M+      DI   N
Sbjct: 639 AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  LC  G+  KA       +  G A D++T+N LI   CK   L++AF   ++M  +
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  T+  +   L   GR+ EA    ++++E  K                ++P++++
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAG---TVLIEMEK--------------SGLEPNNLT 801

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y      H  Q    +A++++ E   KG     STY  L++   K
Sbjct: 802 YDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 251/523 (47%), Gaps = 17/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D VT + ++  L + G+ +E   L  +M K G  PN  TY  L+    K G  KE 
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M     + D+ TY  L++     G  +E     +   S  L P+ VTY  LI+ 
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    EA +++ E++E  I PN VT + +I  + K G +DKA +  R M+E G +P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TLID   K    + A  +   M  +G+K+N   ++++++ L    K++EA  L  
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            AS  G  LD V+Y TLI G F+      A K   E+ +R ++P    YN  I  L   G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLG 568

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A   L E+   G+ PD++T+NT+I   C +G+  KAL+  ++M   S KP+++T N
Sbjct: 569 KFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++GL   G +EKA       +  G +  S+T+  ++ +  + RRL+    +   M   
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  D   Y  +   L   G   +A      M+ +G                 I P +I+
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG-----------------IAPDTIT 731

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           ++  I  HC      +A   + +   + I+ N +T+  L+ GL
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 251/556 (45%), Gaps = 56/556 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V YN +L AL        V   L++M K+G+  +  T N L++G C+ G +  A  +
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D      +L DV  +N LI G+C  G    A  +   M +  L  DVV YNTL+  F  
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY--------------------------- 160
           +G+   A  ++D + E G+ PN  T+   I +Y                           
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 161 --------CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                   C++G+  +A  + R M++ G +P+ VTY TLID+  KAG  +E   ++  M 
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G+ M+ +T   ++  L  + K DE    L  A       + V+Y  LI    +    +
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A ++  EM+E+ I P+  T++++I G  + G  ++A +    + + G+ P+  T+ T+I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            GF      + AL+ ++ M+ +  K +    + L++GL + G +E+A+  F+     G +
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +D V Y TLI  L K   +  AF    E+ ++ + PD   Y      L   G+ +EA+ F
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
            + M   G                 + P   +Y+  I  HC +G    AL++  E +   
Sbjct: 577 LTEMRNMG-----------------LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 513 IAINKSTYMNLMNGLI 528
           I  N  TY  L+ GL 
Sbjct: 620 IKPNLITYNTLVAGLF 635



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 212/439 (48%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           +++++ L + GK+ E   L  D    GL  +   Y  L+ G  K G +  A +    +  
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
              LPD   YN+ IN  C  G  +EA     EM ++ L PD  TYNT+I      G + +
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A KL+ E+    IKPN +T+N ++      G ++KA  ++  M   GFSP  +T+  ++ 
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A  ++  ++    + + M   GL  +    NT+L  LC      +A ++L      G   
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D +++  LI G+ +    + A   + +M  + I P+  T+N ++ GL   G+  +A  +L
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E+ +SG+ P+  T++ +  G   +    +A++ + +MV K F P + T N L+S   + 
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++ +A + F+    +G    S TY+ L+S   + R   +    L +M+EK   P + T 
Sbjct: 848 GMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTL 907

Query: 434 AAIHTALVESGRLEEAQKF 452
           + I  A  + G   +AQ+ 
Sbjct: 908 SFICRAFSKPGMTWQAQRL 926



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 227/488 (46%), Gaps = 35/488 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY  ++DAL K   ++E   +L +M+++ + PN  T++ +++G+ K G L +A   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 68  VDLMTQNKSLPDVWTYNMLINGW-----------------CNA----------------- 93
             +M +    P+V TY  LI+G+                 C                   
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 94  -GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G +EEA  L K+     L  D V Y TLI+  F++G    AFK   EL +  + P+AV 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N+ I   C  GK  +A   +  M   G  PD  TYNT+I ++C+ G   +A +++  M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              +K N IT NT++  L     +++A  LLN     G+    +++  ++    +  + +
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             L + + M    +      YN ++  L   G T +A  +L E+L SG+ PD  TFN +I
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G C    ++ A   + +M+ ++  P+I T N LL GL   G + +A          G  
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +++TY+ L +   K+    +A  L  EM  K   P   TY A+ +   ++G + +A++ 
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856

Query: 453 TSIMVETG 460
              M + G
Sbjct: 857 FKDMQKRG 864



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 35/351 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT++ +  +KG+  +   LL +MK   + PN  TYN LV+G    G 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 61  LKEA-------------------MRVVDLMTQNKSL----------------PDVWTYNM 85
           +++A                    RV+   +Q++ L                 D+  YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+   C  GM  +A  + +EM    + PD +T+N LI    +S     AF    ++    
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I PN  T N ++      G+I +A  ++  ME++G  P+ +TY+ L   + K  N  EA 
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R+   M  KG      T N ++        + +A  L     KRG +    +Y  L++G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            R        K   +MKE+   PS  T + +    S+ G T QA  +L  L
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 26/287 (9%)

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L +A+ R    D  S   L+  + R      A+ L      R   P+T  YN ++  LS 
Sbjct: 61  LAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSD 115

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
                 A  +L E+ + G+  D  T NT++ G C  GQV+ A    ++        D++ 
Sbjct: 116 HA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG-GGIHALDVIG 171

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L++G CR G    AL        +G  +D V YNTL++  C+  +++ A G+L  M+
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E  + P+  TY         +  +EEA      MV  G +               +D   
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL---------------LD--V 274

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++ S  +   C  GR+ +A  +F E  + G A N  TY  L++ L K
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 251/457 (54%), Gaps = 2/457 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T N +++     G++     +L+ + K+G  P+  T N L+ G C  G +K+A
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 65  MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +   D L+ Q   L  V +Y  LING C  G    A +  ++++     PDVV YNT+I+
Sbjct: 149 LHFHDKLLAQGFQLNQV-SYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +     EA+ L  E+   GI  + VT+N +I  +C  GK+ +A  ++  M     +P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN L+DA CK G ++EA  ++ VM +  +K + IT +T++       ++ +A  + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N+ S  G   D  +Y  LI G+ +++  + AL L+ EM ++ ++P   TY+++I GL +S
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+     D+++E+   G   D  T++++I G C  G +++A+   NKM ++  +P+I T 
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            ILL GLC+ G L+ A + F+  + KG  ++  TYN +I+  CK+  LE+A  +LS+ME+
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
               P+ +T+  I  AL +    ++A+K    M+  G
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 231/453 (50%), Gaps = 17/453 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P +  +N +++ +        A  L   +E   + PD++T N LIN F   G+    F +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           + ++ + G  P+ VT N +IK  C +G++ KA      +   GF  + V+Y TLI+  CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G+   A + +  +  +  K + +  NTI+  +C  + + EAY L +  + +G   D V+
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI G+    K   A+ L +EM  + I P+ +TYN ++  L + GK ++A  +L  +L
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           ++ + PD  T++T++ G+    +V+KA    N M      PD+ T  IL++G C+  +++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +AL  F+    K      VTY++LI  LCK  R+   + L+ EM ++    D  TY+++ 
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G L+ A    + M +                 +EI P+  +++  ++  C  GR
Sbjct: 417 DGLCKNGHLDRAIALFNKMKD-----------------QEIRPNIFTFTILLDGLCKGGR 459

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            KDA ++F++   KG  +N  TY  ++NG  K+
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 234/489 (47%), Gaps = 19/489 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P    +N ++  + K+     A+ +   +      PD+ T N+LIN +C+ G +   F +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++      PD VT NTLI      G+  +A    D+L   G + N V++  +I   CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G    A K +R ++     PD V YNT+IDA CK   + EA+ +   M  KG+  + +T
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            NT+++  C   KL EA  LLN    +    +  +Y  L+    ++ K   A  +   M 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           +  + P   TY+ ++ G     + ++A  + N +   G+ PD  T+  +I+GFC    V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL    +M +K+  P IVT + L+ GLC+ G +            +G+  D +TY++LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGK 461
             LCK   L+ A  L ++M+++++ P+ +T+  +   L + GRL++AQ+ F  ++ +   
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +N                    +Y+  IN HC QG  ++AL +  +    G   N  T+ 
Sbjct: 477 LN------------------VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFE 518

Query: 522 NLMNGLIKR 530
            ++  L K+
Sbjct: 519 TIIIALFKK 527



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 169/318 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D VTYNT++      GKL E   LL++M  + + PN  TYNILV   CK G +KEA
Sbjct: 229 GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+ +M +    PDV TY+ L++G+     +++A  +   M  + + PDV TY  LIN 
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++    EA  L  E+ +  + P  VT++ +I   CK G+I     ++  M + G   D
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPAD 408

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY++LID  CK G+++ A  + + M  + ++ N  T   +L  LC   +L +A  +  
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +GY+L+  +Y  +I G+ +      AL +  +M++   +P+ FT+  +I  L +  
Sbjct: 469 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 528

Query: 305 KTEQAIDMLNELLQSGMI 322
           + ++A  +L +++  G++
Sbjct: 529 ENDKAEKLLRQMIARGLL 546



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 52/350 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P  + +N ++D+  K  +   A  +   +  KG++ + ITLN +++  C   ++   + 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L    KRGY                                    P T T N +I GL 
Sbjct: 116 VLAKILKRGY-----------------------------------PPDTVTLNTLIKGLC 140

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G+ ++A+   ++LL  G   ++ ++ T+I+G C  G    A++F  K+  +  KPD+V
Sbjct: 141 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVV 200

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++  +C+  ++ +A   F    +KG + D VTYNTLI   C   +L++A GLL+EM
Sbjct: 201 MYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM 260

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             K + P+ YTY  +  AL + G+++EA+   ++M++                   + P 
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC-----------------VKPD 303

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            I+YS  ++ +      K A  +F      G+  +  TY  L+NG  K +
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 116/216 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY  +++   K   ++E  +L  +M ++ +VP   TY+ L+ G CK G 
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     ++D M       DV TY+ LI+G C  G L+ A  L  +M+  ++ P++ T+  
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + GR  +A ++  +L   G   N  T+N+MI  +CK+G +++A  ++  ME+NG
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             P+  T+ T+I A  K    ++A +++  M  +GL
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 52/293 (17%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +  + A+  ++ M   +  P    +N ++   ++      A+ + + L   G+ PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+ FC  GQ+        K++++ + PD VT N L+ GLC +G ++KAL F    + 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 389 KGKAV-----------------------------------DSVTYNTLISSLCKERRLED 413
           +G  +                                   D V YNT+I ++CK + + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A+GL SEM  K +  D  TY  +       G+L+EA          G +N  V++     
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEA---------IGLLNEMVLK----- 263

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
               I+P+  +Y+  ++  C +G+ K+A  +     +  +  +  TY  LM+G
Sbjct: 264 ---TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 243/460 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VT +++L+      +++E   L+  M   G  PN  T+N L+ G      
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ ++D M      PD+ TY +++NG C  G  + AF L  +ME  KL P V+ Y T
Sbjct: 202 ASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTT 261

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++    +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E  
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  T++ LIDA  K G + EA ++ D M ++ +  + +T +++++  C   +LDEA 
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + D VSY TLI G+ + ++ +  ++L+ EM +R ++ +T TY  +I GL
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G  + A ++  E++  G+ P+  T+NT++ G C  G++EKA+     +     +P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F +  LKG   D V YNT+IS  C++   E+A  L  E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+E    P+   Y  +  A +  G  E + +    M   G
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 265/525 (50%), Gaps = 21/525 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  + ++ +L A+ K  K + V  L   M+  G+  N  TY+IL++ +C+   L  A+ 
Sbjct: 78  FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALA 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    P++ T + L+NG+C++  + EA  L  +M      P+ VT+NTLI+  F
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  LID +   G +P+ VT+ +++   CK G  D A  ++  ME+    P  +
Sbjct: 198 LHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVL 257

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y T+ID  CK  +M++A  +   M  KG++ N +T ++++  LC   +  +A  LL+  
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    D  ++  LI  + ++ K   A KL+DEM +R I PS  TY+++I G     + 
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     PD  +++T+I GFC   +V++ ++   +M ++    + VT   L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL + G  + A + F+  +  G   + +TYNTL+  LCK  +LE A  +   ++  K+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P  YTY  +   + ++G++E+       +   G                 + P  ++Y+
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-----------------VKPDVVAYN 540

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I+  C +G  ++A  +F+E ++ G   N   Y    N LI+ R
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY----NTLIRAR 581



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/445 (32%), Positives = 237/445 (53%), Gaps = 1/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VT+NT++  LF   K +E   L+  M  +G  P+  TY ++V+G CK G    A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M Q K  P V  Y  +I+G C    +++A  L KEME+  + P+VVTY++LI+ 
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  +A +L+ ++ E  I P+  T + +I  + KEGK+ +A K+   M +    P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY++LI+  C    ++EA +M + M  K    + ++ +T++   C  K++DE   L  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+RG   + V+Y TLI G F+    + A +++ EM    + P+  TYN ++ GL ++G
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+A+ +   L +S M P   T+N +I G C  G+VE        +  K  KPD+V  N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++SG CR+G  E+A   F+     G   +S  YNTLI +  ++   E +  L+ EM   
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
               D  T   + T ++  GRL+++
Sbjct: 601 GFAGDASTIGLV-TNMLHDGRLDKS 624



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 216/411 (52%), Gaps = 1/411 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY  +++ L K+G  +    LL+ M++  L P    Y  ++ G CK   + +A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M      P+V TY+ LI+  CN G   +A RL  +M   K+ PDV T++ LI+ 
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+ +EA KL DE+ +  I P+ VT++ +I  +C   ++D+A ++   M      PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+Y+TLI   CKA  ++E   +   M ++GL  NT+T  T++  L      D A  +  
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK 455

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + ++Y TL+ G  ++ K  +A+ +++ ++  ++ P+ +TYN MI G+ ++G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E   D+   L   G+ PD   +NT+I GFC +G  E+A     +M E    P+    N
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            L+    R+G  E + +  +     G A D+ T   L++++  + RL+ +F
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 239/472 (50%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  ++ L++        +    L ++M++L +  +  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  ++ ++ + G +PN VT + ++  YC   +I +A  +V  M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ VT+NTLI          EA  ++D M  KG + + +T   +++ LC     D A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +LLN   +       + Y T+I G  +++  + AL L+ EM+ + I P+  TY+++I  L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + PD  TF+ +I  F  EG++ +A + +++MV++S  P I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + L++G C    L++A + F   + K    D V+Y+TLI   CK +R+++   L  E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L  +  TY  +   L ++G  + AQ+    MV  G                 + P
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-----------------VPP 464

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++Y+  ++  C  G+ + A+ +FE  ++  +     TY  ++ G+ K  K
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 189/345 (54%), Gaps = 1/345 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTY++++  L   G+ ++   LLSDM ++ + P+  T++ L+  + K G 
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++ D M +    P + TY+ LING+C    L+EA ++ + M S    PDVV+Y+T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F ++ R  E  +L  E+ + G+  N VT+  +I+   + G  D A +I + M  +G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYNTL+D  CK G +E+A  + + + R  ++    T N ++  +C   K+++ +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  + S +G   D V+Y T+I+G+ R      A  L+ EMKE   +P++  YN +I   
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
            + G  E + +++ E+   G   D +T   ++     +G+++K+ 
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 181/370 (48%), Gaps = 17/370 (4%)

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           E K+D A  +   M ++   P  + ++ L+ A  K    +    + + M   G+  N  T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            + +++  C   +L  A  +L    K GY  + V+  +L+ GY   ++ + A+ L D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
                P+T T+N +I GL    K  +A+ +++ ++  G  PD  T+  +++G C  G  +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A    NKM +   +P ++    ++ GLC+   ++ AL  F+    KG   + VTY++LI
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           S LC   R  DA  LLS+M E+K+ PD +T++A+  A V+ G+L EA+K    MV+    
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK---- 354

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          IDPS ++YS  IN  C   R  +A Q+FE    K    +  +Y  
Sbjct: 355 -------------RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401

Query: 523 LMNGLIKRRK 532
           L+ G  K ++
Sbjct: 402 LIKGFCKAKR 411



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 144/302 (47%), Gaps = 17/302 (5%)

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           E KLD+A  L     K   +   + +  L++   +  K +  + L ++M+   +  + +T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y+ +I    +  +   A+ +L ++++ G  P+  T +++++G+C   ++ +A+   ++M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
              ++P+ VT N L+ GL       +A+      + KG   D VTY  +++ LCK    +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            AF LL++ME+ KL P    Y  I   L ++  +++A      M   G            
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG------------ 286

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P+ ++YS  I+  C+ GR+ DA ++  +  ++ I  +  T+  L++  +K  K
Sbjct: 287 -----IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 533 SI 534
            +
Sbjct: 342 LV 343



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 17/194 (8%)

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           SE +++ A+    +MV+    P I+  + LLS + +    +  +         G   +  
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHY 117

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TY+ LI+  C+  +L  A  +L +M +    P+  T +++      S R+ EA      M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
             TG       QPNT           ++++  I+      +  +A+ + +    KG   +
Sbjct: 178 FVTG------YQPNT-----------VTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPD 220

Query: 517 KSTYMNLMNGLIKR 530
             TY  ++NGL KR
Sbjct: 221 LVTYGVVVNGLCKR 234


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/455 (32%), Positives = 240/455 (52%), Gaps = 7/455 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK----QGLVPNRTTYNILVSGYC 56
           M G GC PD   Y  ++  L K GKL+E    L+ M +    +G+ P+   +N+++   C
Sbjct: 172 MLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLC 231

Query: 57  KLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
             G L++A+   D +  +  L   +T+N L+   C A   EEA    K+M   +  P + 
Sbjct: 232 ASGNLEDALAYFDELDDSLDLTH-FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF 290

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY +L++ F + GR  EA   + E  E G  P+AVT+  +I   CK G++++ C+    M
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G+ PD VTY  LID   KA  + +A R+   M + G  ++T+T N IL  LC   ++
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
            EAY    +  +RG     V+Y  L+ G+  +   + A++L+  M +R   P+  +YN +
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE-GQVEKALQFHNKMVEKS 355
           I GL ++GK  +A     +LLQ  + PD  TFN+ +HG C     V   ++    MV + 
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P++ + +IL+ G+CR G LE  L+ F   + +G A D V +NTLI  LC   R+++A 
Sbjct: 531 TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 590

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            +  E+E +   PD ++Y ++  AL    R+EEA+
Sbjct: 591 EVFRELERRS-APDAWSYWSLLDALSRCERMEEAR 624



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 265/537 (49%), Gaps = 25/537 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           L D      +L+ L K G+L+    LL +M      P+   + ++++G C+   L EA  
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFS 62

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V++   +    PD  TYN+ I+G C A  +++AF+L K+M+  K LP  VTY  L++   
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++GR  EA  +++++ E G  P   T+ ++I    K G++++A +I  +M  NG  PD  
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVM----GRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            Y  LI    K G ++EA   ++ M      +G++ + +  N ++  LC    L++A   
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +        L   ++  L+    + E+   A+    +M ER+  P+ FTY +++ G  +
Sbjct: 243 FDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLK 301

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ ++A+  L E ++ G IPD  T+ +II G C  G+VE+  +  ++M  + ++PD VT
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 361

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ G  +  ++ KA + +R  +  G  V +VTYN ++  LCK  R+ +A+     ME
Sbjct: 362 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 421

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E+       TY+A+       G +  A +    M++ G                  +P+ 
Sbjct: 422 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG-----------------CEPNL 464

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +SY+  I   C  G+   A   FE+  Q+ +  +  T+ + ++GL +R  ++   V+
Sbjct: 465 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVE 521



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 273/564 (48%), Gaps = 61/564 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTYN  +D L K  ++++   LL  M ++  +P   TY  LV G  K G L EA
Sbjct: 71  GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +++ M +  + P + TY ++I+G   AG +EEA R+  +M      PD   Y  LI+ 
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190

Query: 125 FFESGRSMEAFKLIDELDEH----GIKPNAVTHNIMIKWYCKEGKIDKA----------- 169
             + G+  EA   ++++ E+    G++P+ V HN++I+  C  G ++ A           
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSL 250

Query: 170 --------------CK---------IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                         CK          V+ M E    P   TY +L+D   K G ++EA  
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            +     +G   + +T  +I+  LC   +++E     +    RGY  D V+Y  LI G+ 
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           + +   +A +++ +M +   + ST TYN ++ GL ++G+  +A      + + G +    
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T++ ++ GFCSEG V  A++   +M+++  +P++V+ NI++ GLCR G L KA  +F   
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 490

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLE---DAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           + +    D  T+N+ +  LC+  RL+   D   L   M  +   P+ ++Y+ +   +  +
Sbjct: 491 LQRRLCPDVYTFNSFLHGLCQ--RLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRA 548

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G LE           T +I H++V    +       P  + ++  I   C  GR  +AL+
Sbjct: 549 GGLE----------VTLEIFHEMVSRGVA-------PDVVVFNTLIRWLCIAGRVDEALE 591

Query: 504 IFEETRQKGIAINKSTYMNLMNGL 527
           +F E  ++  A +  +Y +L++ L
Sbjct: 592 VFRELERRS-APDAWSYWSLLDAL 614



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 262/561 (46%), Gaps = 56/561 (9%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD V +  +++ L ++ +L+E   +L    + G  P+  TYN+ + G CK   + +A 
Sbjct: 37  CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 96

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +++  M + K LP   TY  L++G   AG L+EA  + ++M      P + TY  +I+  
Sbjct: 97  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGL 156

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--- 182
            ++GR  EA ++  ++  +G +P+A  +  +I    K GK+D+A   +  M ENG +   
Sbjct: 157 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGV 216

Query: 183 -PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK------- 234
            PD V +N +I   C +GN+E+A    D +    L +   T N ++  LC  +       
Sbjct: 217 EPDVVIHNLVIRQLCASGNLEDALAYFDELD-DSLDLTHFTFNPLVAALCKAERTEEAIA 275

Query: 235 ----------------------------KLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
                                       +LDEA + L  A +RG+  D V+Y ++I G  
Sbjct: 276 FVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLC 335

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  +     + + EM+ R   P   TY A+I G  ++    +A  +  ++LQSG +    
Sbjct: 336 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 395

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+N I+ G C  G+V +A      M E+     +VT + L+ G C EG +  A++ FR  
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + +G   + V+YN +I  LC+  +L  A+    ++ +++L PD YT+ +    L +  RL
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RL 513

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +       +          +V   TS       P+  SYS  ++  C  G  +  L+IF 
Sbjct: 514 DTVGDGVELF-------ESMVSQGTS-------PNLHSYSILMDGICRAGGLEVTLEIFH 559

Query: 507 ETRQKGIAINKSTYMNLMNGL 527
           E   +G+A +   +  L+  L
Sbjct: 560 EMVSRGVAPDVVVFNTLIRWL 580



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 1/103 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  +Y+ ++D + + G L    ++  +M  +G+ P+   +N L+   C  G + EA
Sbjct: 530 GTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 589

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           + V   + + +S PD W+Y  L++       +EEA  L   M+
Sbjct: 590 LEVFREL-ERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMK 631


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 265/555 (47%), Gaps = 46/555 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TY  ++D L K+ K++E R +LS+M ++GL+P+  TYN L+ GYCK G + +A
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++DLM  N   P+  TYN LI G C    + +A  L  +M   KL P ++TYN+LI+ 
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +      A++L+  ++E+G+ P+  T+++ I   CKEG++++A  +  +++  G   +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y  LID  CK G ++ A+ +++ M       N+ T N ++  LC EKK+ EA  L+ 
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G     V+Y  LI    +D   + ALK+++ M      P   TY A +      G
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+  D++ ++ + G++PD  T+  +I G+   G   +A  F   MV+   KP +   +
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688

Query: 365 ILLSGLCRE----------GI-------------------LEKALKFFRSWILKGKAVDS 395
           IL+  L  E          GI                    E ALK F   +  G  +D 
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDV 748

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
             Y  LI+  C++ RLE+A GL+  M+E+ + P    Y ++     + G   EA +    
Sbjct: 749 SIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDA 808

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           MVE G +                 P   SY   +     +G  + A  +F      G   
Sbjct: 809 MVENGLL-----------------PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 851

Query: 516 NKSTYMNLMNGLIKR 530
           ++  +  L++GL+KR
Sbjct: 852 DEVAWKVLIDGLLKR 866



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 255/528 (48%), Gaps = 23/528 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  + V+Y  ++  L + G++NE   L +DM +    P   TY +L+      G   EA
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M +    P+V TY +LI+G C    ++EA ++  EM    L+P VVTYN LI+ 
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G   +AF+++D ++ +   PN  T+N +I   CK+ K+ KA  ++  M E   SP 
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+LI   CK  ++E A+R++ +M   GL  +  T +  + TLC E +++EA  L +
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S   +G   +EV Y  LI GY +  K + A  L + M     +P+++TYN +I GL +  
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A  ++ ++L  G+ P   T+  +I     +G  + AL+  N MV   ++PD+ T  
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L     +G+LE+          +G   D VTY  LI    +      AF  L  M + 
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P  Y  + +   L    R++E +       E G                 ID  S  
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRS------EIG-----------------IDSVSNV 715

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            S  I +      Y+ AL++FE+  + G  I+ S Y  L+ G  ++ +
Sbjct: 716 NSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQER 763



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 232/484 (47%), Gaps = 17/484 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P    YN ++    K   + E   V   +  N+  P+++T+N ++NG+C  G + EA   
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++    L PD  TY +LI     +     A+++   + + G + N V++  +I   C+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G+I++A K+  +M E+   P   TY  LI A   +G   EA  + + M  KG + N  T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
              ++  LC E K+DEA  +L+  S++G     V+Y  LI GY ++   + A ++ D M+
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
                P+T TYN +I GL +  K  +A+ +LN++L+  + P   T+N++IHG C    +E
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A +  + M E    PD  T ++ +  LC+EG +E+A   F S   KG   + V Y  LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              CK  +++ A+ LL  M      P+ YTY  +   L +  +++EA    + M+  G  
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG-- 574

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          + P+ ++Y+  I E    G +  AL++F      G   +  TY  
Sbjct: 575 ---------------VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 523 LMNG 526
            ++ 
Sbjct: 620 FLHA 623



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 224/455 (49%), Gaps = 31/455 (6%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           +V +Y+ ++N    A +L  A ++R  M +S   + DV+               +E F+ 
Sbjct: 100 NVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFV-------------LEVFRK 146

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           ++   E   KP    +N ++    K   ID+   +   +  N  SP+  T+N +++  CK
Sbjct: 147 MNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            GN+ EA      + + GL  +T T  +++   C  K +D AY +     ++G   +EVS
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI G     + N ALKL+ +M E    P+  TY  +I+ LS SG+  +A+++ NE+ 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G  P+  T+  +I G C E ++++A +  ++M EK   P +VT N L+ G C+EG+++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A +            ++ TYN LI  LCK+R++  A  LL++M E+KL P   TY ++ 
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
               +   LE A +  S+M E G +                 P   +YS  I+  C +GR
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLV-----------------PDQWTYSVFIDTLCKEGR 489

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            ++A  +F+  + KG+  N+  Y  L++G  K  K
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 206/422 (48%), Gaps = 10/422 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  TY+  +D L K+G++ E   L   +K +G+  N   Y  L+ GYCK+G +  A
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVA 528

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M  +  LP+ +TYN+LI G C    ++EA  L  +M ++ + P VVTY  LI  
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A K+ + +   G +P+  T+   +  Y  +G +++   ++  M E G  PD
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  LID   + G    AF  +  M   G K +   ++ ++  L  E ++ E      
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE------ 702

Query: 245 SASKRGYYLDEVSY--GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           + S+ G  +D VS      I   ++  +   ALKL+++M E         Y A+I G  Q
Sbjct: 703 TRSEIG--IDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 760

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             + E+A  +++ + + GM P E  +N+++   C  G   +A++  + MVE    P + +
Sbjct: 761 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 820

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             +L+ GL  EG  EKA   F   +  G   D V +  LI  L K   +++   L+  ME
Sbjct: 821 YKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 880

Query: 423 EK 424
           EK
Sbjct: 881 EK 882



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 151/312 (48%), Gaps = 8/312 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY   L A F +G L EV D+++ M ++G++P+  TY +L+ GY +LG 
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A   +  M      P ++  ++LI    +   ++E    R E+     +  V   N+
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET---RSEIG----IDSVSNVNS 717

Query: 121 L-INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           + I   +++     A KL +++ EHG   +   +  +I  +C++ ++++A  +V +M+E 
Sbjct: 718 VDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER 777

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G SP    YN+L+D  CK G   EA R++D M   GL     +   ++  L  E   ++A
Sbjct: 778 GMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKA 837

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +     GY  DEV++  LI G  + +  +   +L D M+E+          A +  
Sbjct: 838 KAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMR 897

Query: 300 LSQSGKTEQAID 311
           L+ +  T+ A++
Sbjct: 898 LAAANSTKGALE 909


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 246/460 (53%), Gaps = 4/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V Y T++ AL  +G +NE   LL +M   G   +  T+N +V G C LG 
Sbjct: 198 MARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGR 257

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA R+VD M     +P+  TY  L+ G C A  +EEA  +   +  L    +VV +NT
Sbjct: 258 LREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPEL----NVVLFNT 313

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I R    G+  EA +L + +   G  P+A T++I+I   CK G++  A K++R ME+ G
Sbjct: 314 VIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKG 373

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P  VTY  L+ + C+ G  +    M++VM  KGL MN    N ++  +C ++++D+A 
Sbjct: 374 FAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAM 433

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +     +GY  D  +Y T+I     + +   A  L++ +    ++ +  TYN +I  L
Sbjct: 434 RFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHAL 493

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  + AI + N+++  G   D  ++N +I   C +G V++++   ++M EK  KP+ 
Sbjct: 494 LRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNN 553

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+ N+L+S LC+   +  AL+  +  + +    D VTYNTLI+ LCK   +  A  LL +
Sbjct: 554 VSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEK 613

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +  + +  D  TY  + +   ++  L +A    +  V +G
Sbjct: 614 LHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSG 653



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 251/559 (44%), Gaps = 49/559 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRT-TYNILVSGYCKLGWLK 62
           F   P   +YNT+L A  +     +V  L   M  +  VP  T T++I     C+LG   
Sbjct: 130 FAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRAD 189

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA+ ++  M ++  +PD   Y  +I+  C  G + EA  L  EM  +    DV T+N ++
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIV 249

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK-------------------- 162
           +     GR  EA +L+D +   G  PNA+T+  ++K  C                     
Sbjct: 250 HGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVV 309

Query: 163 -----------EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                      +GK+ +A ++   M   G  PD  TY+ LI   CK G +  A +++  M
Sbjct: 310 LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM 369

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG   + +T   +LH+ C     D    +L   S +G  ++   Y  +I    +D + 
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRM 429

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A++   EMK +   P   TYN +I+ L  + + E+A  +   LL  G++ +  T+NT+
Sbjct: 430 DDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL 489

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IH     G  + A+   N MV      DIV+ N L+  LCR+G +++++        KG 
Sbjct: 490 IHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGI 549

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++V+YN LIS LCK RR+ DA  L  EM  ++L PD  TY  +   L + G +  A  
Sbjct: 550 KPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALN 609

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
                    K+++           E++    I+Y+  I+ HC      DA  +       
Sbjct: 610 LLE------KLHN-----------EDVHADIITYNILISWHCKARLLHDASMLLNRAVTS 652

Query: 512 GIAINKSTYMNLMNGLIKR 530
           GI  N+ T+  ++   +++
Sbjct: 653 GITPNERTWGIMVQNFVRK 671



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 23/439 (5%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACK 171
           P   +YNT++  F  +    +   L   +     + P   T +I  +  C+ G+ D+A  
Sbjct: 134 PSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALT 193

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           ++R+M  +G  PD V Y T+I A C  G + EA  ++D M   G   +  T N I+H LC
Sbjct: 194 MLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLC 253

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              +L EA  L++    RG   + ++YG L+ G     +   A  +   + E  ++    
Sbjct: 254 TLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVV---- 309

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
            +N +I      GK ++A ++   +   G  PD  T++ +IHG C  G++  A++   +M
Sbjct: 310 LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM 369

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            +K F P IVT  ILL   CR G+ +           KG +++   YN +I ++CK+RR+
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRM 429

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV---- 467
           +DA   + EM+ +   PD  TY  I   L  + ++EEA+     ++  G + + +     
Sbjct: 430 DDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL 489

Query: 468 ----------QPNTSKTPEEI----DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                     Q   S   + +        +SY+  I   C  G    ++ +  E  +KGI
Sbjct: 490 IHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGI 549

Query: 514 AINKSTYMNLMNGLIKRRK 532
             N  +Y  L++ L K R+
Sbjct: 550 KPNNVSYNLLISELCKTRR 568



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 146/297 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P  VTY  +L +  + G  + +R +L  M  +GL  N   YN ++   CK   
Sbjct: 369 MEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRR 428

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AMR +  M      PD+ TYN +I   CN   +EEA  L + +    ++ + +TYNT
Sbjct: 429 MDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNT 488

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    +G   +A  L +++  HG   + V++N +IK  C++G +D++  ++  M E G
Sbjct: 489 LIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKG 548

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V+YN LI   CK   + +A  +   M  + L  + +T NT+++ LC    +  A 
Sbjct: 549 IKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAAL 608

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            LL        + D ++Y  LI+ + +    + A  L +      I P+  T+  M+
Sbjct: 609 NLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMV 665


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 266/526 (50%), Gaps = 22/526 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V++NTI+    K G  +  +     M K G++P+  +YNIL+ G    G ++EA+ +
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTLINR 124
            + M +    PD+ TY ++  G+   G++  A  + ++M   E LK  PD+VTY  LI  
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLK--PDLVTYTVLICG 300

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA +L  +L   G + N + +++++   CK G++D+A +++  ME N   PD
Sbjct: 301 HCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPD 360

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY+ LI   CK G +++A ++   M    +  N+   + IL  LC +  L +A M  +
Sbjct: 361 LVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFD 420

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S        D   Y  +I GY +      A++L+  ++++ I PS  T+N++I+G  ++ 
Sbjct: 421 SLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNR 480

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K  +A  +L  +   G+ P   T+ T+++ +C EG + K  +   +M  K  +P +VT  
Sbjct: 481 KVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYT 540

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++ GLC++  LE++++       KG A D +TYNT+I   CK + +  AF LL +M   
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIH 600

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P   TY  +   L   G +E+A +                    S     I+ + ++
Sbjct: 601 NLEPTPATYNVLIDGLCRYGDVEDADRVL-----------------VSLQDRNINLTKVA 643

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           Y+  I  HC +G  + A+++F +  +KG  ++   Y  ++N L KR
Sbjct: 644 YTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKR 689



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 252/496 (50%), Gaps = 36/496 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G LPD  +YN ++  L   G + E  +L +DM+KQGL P+  TY I+  G+  LG 
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270

Query: 61  LKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +  A  ++  M  ++ L PD+ TY +LI G C  G +EEA RLR+++ S     +V+ Y+
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYS 330

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--- 176
            L++   + G+  EA +L+ E++ + ++P+ VT++I+I   CK+GK+ +A ++ + M   
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN 390

Query: 177 --EENGFS------------------------------PDCVTYNTLIDANCKAGNMEEA 204
               N F+                              PD   YN +ID   K G++EEA
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEA 450

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            R+   +  K +  + +T N++++  C  +K+ EA  LL S    G     V+Y TL+  
Sbjct: 451 VRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           Y  +   N+  +L  EM  + I P+  TY  +I GL +  K E+++ +L ++   G+ PD
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPD 570

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           + T+NTII  FC    + KA +  + M+  + +P   T N+L+ GLCR G +E A +   
Sbjct: 571 QITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLV 630

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S   +   +  V Y T+I + C +   + A  +  +M EK        Y+A+   L +  
Sbjct: 631 SLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRC 690

Query: 445 RLEEAQKFTSIMVETG 460
            + EA+ +  IM+  G
Sbjct: 691 LINEAKYYFCIMLSDG 706



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 261/533 (48%), Gaps = 57/533 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TYN++L   +     + + D+ +D+K  G   +  T +I+V G C     ++A+  
Sbjct: 116 PSIQTYNSLL---YNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLF 172

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +      +  P V ++N +++ +C  G+ + A      M    +LPD  +YN LI+    
Sbjct: 173 LRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIV 232

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCV 186
           +G   EA +L +++++ G++P+ VT+ I+ K +   G +  A +I++ M  + G  PD V
Sbjct: 233 AGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLV 292

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY  LI  +C+ GN+EEA R+   +   G ++N I  + +L +LC               
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC--------------- 337

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            KRG                   + + AL+L  EM+   + P   TY+ +I GL + GK 
Sbjct: 338 -KRG-------------------QVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKV 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           +QAI +  E+  + + P+    + I+ G C +G +  A  + + ++  + +PD+   NI+
Sbjct: 378 QQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIM 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  + G +E+A++ ++    K      VT+N+LI   CK R++ +A  LL  ++   L
Sbjct: 438 IDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGL 497

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P   TY  +  A  E G +              K++  +++ N     ++I+P+ ++Y+
Sbjct: 498 EPSAVTYTTLMNAYCEEGNI-------------NKLHELLLEMNL----KDIEPTVVTYT 540

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
             I   C Q + ++++Q+ E+ R KG+A ++ TY  ++    K  K + KA +
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCK-AKDMRKAFE 592



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 226/414 (54%), Gaps = 6/414 (1%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y+ +L +L K+G+++E   LL +M+   L P+  TY+IL+ G CK G +++A+++   
Sbjct: 327 ILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKE 386

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL---KLLPDVVTYNTLINRFFE 127
           M  N+  P+ + ++ ++ G C  GML +A   R   +SL    L PDV  YN +I+ + +
Sbjct: 387 MCFNRIFPNSFAHSGILKGLCEKGMLSDA---RMYFDSLIMSNLRPDVTLYNIMIDGYVK 443

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA +L   L +  I P+ VT N +I  +CK  K+ +A +++ +++ +G  P  VT
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TL++A C+ GN+ +   ++  M  K ++   +T   ++  LC ++KL+E+  LL    
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR 563

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D+++Y T+I  + + +   +A +L D+M    + P+  TYN +I GL + G  E
Sbjct: 564 AKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVE 623

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L  L    +   +  + T+I   C +G  ++A++  ++MVEK F+  I   + ++
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVI 683

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           + LC+  ++ +A  +F   +  G + D   +  ++++  +   +   F LL+ M
Sbjct: 684 NRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 231/459 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY  ++    + G + E   L  D+   G   N   Y++L+S  CK G + EA
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++++  M  N   PD+ TY++LI+G C  G +++A +L KEM   ++ P+   ++ ++  
Sbjct: 346 LQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKG 405

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             E G   +A    D L    ++P+   +NIMI  Y K G +++A ++ + + +   +P 
Sbjct: 406 LCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPS 465

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N+LI   CK   + EA R+++ +   GL+ + +T  T+++  C E  +++ + LL 
Sbjct: 466 IVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLL 525

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + +      V+Y  +I G  +  K   +++L ++M+ + + P   TYN +I    ++ 
Sbjct: 526 EMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAK 585

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A ++L+++L   + P   T+N +I G C  G VE A +    + +++     V   
Sbjct: 586 DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYT 645

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++   C +G  ++A+K F   + KG  V    Y+ +I+ LCK   + +A      M   
Sbjct: 646 TMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSD 705

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            + PD+  +  +  A   +G +    +  ++M++ G ++
Sbjct: 706 GVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLH 744



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 23/269 (8%)

Query: 266 FRDEKANR----ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
            ++E A+R    AL +  +MKE+ + PS  TYN++++ L     T+   D+ N++  SG 
Sbjct: 90  LQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRH---TDIMWDVYNDIKDSGT 146

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
                T + I+ G C + +   A+ F  +   K F P +V+ N ++S  C+ G+ + A  
Sbjct: 147 PQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKS 206

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
           FF   +  G   D+ +YN LI  L     +E+A  L ++ME++ L PD  TY  +     
Sbjct: 207 FFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFH 266

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
             G +  A++    M+                T E + P  ++Y+  I  HC  G  ++A
Sbjct: 267 LLGLMSGAREIIQKML----------------TDEGLKPDLVTYTVLICGHCQMGNIEEA 310

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           L++  +    G  +N   Y  L++ L KR
Sbjct: 311 LRLRRDLLSSGFQLNVILYSVLLSSLCKR 339


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 268/539 (49%), Gaps = 18/539 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D VTY+TI+D L K   ++    +L  M  +G+ P+  TYN ++ G CK   +  A  V+
Sbjct: 233 DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVL 292

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      PDV TYN +I+G C A  ++ A  + + M    + PD+ TYN LI+ +  +
Sbjct: 293 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLST 352

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   E  + ++E+   G+ P+ VT+++++ + CK GK  +A KI   M   G  P+   Y
Sbjct: 353 GEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIY 412

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             L+      G + +   ++D+M   G+  N    N +L     +  +DEA  + +  S+
Sbjct: 413 GILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ 472

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+YG LI    +  + + A+  +++M    + P++  +N++++GL    + E+
Sbjct: 473 HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEK 532

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A ++  E+   G+ P+   FNTI+   C+EGQV  A +  + M     +P++++ N L+ 
Sbjct: 533 AEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIG 592

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G C  G  ++A +     +  G   D ++Y+TL+   CK  R+++A+ L  EM  K + P
Sbjct: 593 GHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTP 652

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKT---------- 474
              TY+ I   L  + R  EA++    M+++G+      + ++     KT          
Sbjct: 653 GAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIF 712

Query: 475 ----PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                +++ P+ I+++  I+     GR KDA+ +F      G+  N  TY  +M  +I+
Sbjct: 713 QSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQ 771



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 255/535 (47%), Gaps = 20/535 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG---LVPNRTTYNILVSGYCK 57
           M  FGC+P+ V+ NT+L  L  + ++ E  +LL  M + G     PN  TYN ++ G CK
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              +  A  V+  M       DV TY+ +I+G C A  ++ A  + + M    + PDVVT
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YNT+I+   ++     A  ++  + + G+KP+ VT+N +I   CK   +D+A  ++++M 
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           +    PD  TYN LI      G  +E  R ++ M  +GL  + +T + +L  LC   K  
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  +     ++G   +   YG L+ GY           L D M    I P+ + +N ++
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVL 451

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
              ++    ++A+ + + + Q G+ PD  T+  +I   C  G+V+ A+   N+M+     
Sbjct: 452 CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVT 511

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+ V  N L+ GLC     EKA + F     +G   + V +NT++ +LC E ++  A  L
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRL 571

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           +  ME   + P+  +Y  +      +GR +EA +   +MV  G                 
Sbjct: 572 IDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG----------------- 614

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + P  ISY   +  +C  GR  +A  +F E  +KG+     TY  ++ GL   R+
Sbjct: 615 LKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 235/452 (51%), Gaps = 1/452 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNTI+D L K   ++    +L  M  + + P+  TYN L+ GY   G  KE 
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEV 358

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R ++ M      PDV TY++L++  C  G   EA ++   M    + P+V  Y  L++ 
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +   L+D +  +GI PN    NI++  Y K+  ID+A  I   M ++G SPD
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPD 478

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  LIDA CK G +++A    + M   G+  N++  N++++ LC   + ++A  L  
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   + V + T++     + +   A +L D M+   + P+  +YN +I G   +G
Sbjct: 539 EMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAG 598

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +T++A  +L+ ++  G+ PD  +++T++ G+C  G+++ A     +M+ K   P  VT +
Sbjct: 599 RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS 658

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +L GL       +A + + + I  G+  D  TYN +++ LCK   +++AF +   +  K
Sbjct: 659 TILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQK-FTSI 455
            L P+  T+  +   L + GR ++A   F SI
Sbjct: 719 DLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 248/526 (47%), Gaps = 70/526 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNTI+D L K   ++    +L  M  +G+ P+  TYN ++ G CK   +  A
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+  M      PD+ TYN LI+G+ + G  +E  R  +EM +  L PDVVTY+ L++ 
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383

Query: 125 FFESGRSMEAFK-----------------------------------LIDELDEHGIKPN 149
             ++G+  EA K                                   L+D +  +GI PN
Sbjct: 384 LCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPN 443

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
               NI++  Y K+  ID+A  I   M ++G SPD VTY  LIDA CK G +++A    +
Sbjct: 444 NYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFN 503

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G+  N++  N++++ LC   + ++A  L      +G   + V + T++     + 
Sbjct: 504 QMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEG 563

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   A +L D M+   + P+  +YN +I G   +G+T++A  +L+ ++  G+ PD  +++
Sbjct: 564 QVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYD 623

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKP------------------------------- 358
           T++ G+C  G+++ A     +M+ K   P                               
Sbjct: 624 TLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS 683

Query: 359 ----DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
               DI T NI+L+GLC+   +++A K F+S   K    + +T+  +I  L K  R +DA
Sbjct: 684 GQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDA 743

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             L + +    L P+  TY  +   +++ G L+E       M ++G
Sbjct: 744 MDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 232/454 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY+ +LD L K GK  E R +   M ++G+ PN T Y IL+ GY   G 
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +   ++DLM  N   P+ + +N+++  +    M++EA  +   M    L PDVVTY  
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGI 484

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ PN+V  N ++   C   + +KA ++   M + G
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V +NT++   C  G +  A R++D M R G++ N I+ NT++   C   + DEA 
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAA 604

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   D +SY TL+ GY +  + + A  L+ EM  + + P   TY+ ++ GL
Sbjct: 605 QLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGL 664

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + +  +A ++   +++SG   D  T+N I++G C    V++A +    +  K  +P+I
Sbjct: 665 FHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNI 724

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T  I++  L + G  + A+  F S    G   + VTY  ++ ++ +E  L++   L   
Sbjct: 725 ITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLA 784

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           ME+    PD     AI  +L+  G +  A  + S
Sbjct: 785 MEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLS 818



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 239/489 (48%), Gaps = 21/489 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR- 101
           P+  TY+IL   +C+LG ++       L+ +     +    N L+NG C+A  ++EA   
Sbjct: 88  PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG---IKPNAVTHNIMIK 158
           L + M     +P+VV+ NTL+       R  EA +L+  + E G     PN VT+N +I 
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
             CK   +D+A  ++++M + G   D VTY+T+ID  CKA  ++ A  ++  M  KG+K 
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           + +T NTI+  LC  + +D A  +L     +G   D V+Y T+I G  + +  +RA  + 
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
             M ++ + P   TYN +I G   +G+ ++ +  L E+   G+ PD  T++ ++   C  
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+  +A +    M+ K  KP++    ILL G    G +          +  G + ++  +
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           N ++ +  K+  +++A  + S M +  L PD  TY  +  AL + GR+++A    + M+ 
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                 + P+S+ ++  +   C+  R++ A ++F E   +G+  N  
Sbjct: 508 DG-----------------VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVV 550

Query: 519 TYMNLMNGL 527
            +  +M  L
Sbjct: 551 FFNTIMCNL 559



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 230/512 (44%), Gaps = 62/512 (12%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA---GMLEEAFRLRKEME---SLKLLPD 114
           + +A+++ D +  +     V  +N L+N    A      E A  L   M    S K+ PD
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 115 VVTYNTLINRFFESGRSMEAF----------------------------KLIDE------ 140
           + TY+ L   F   GR    F                            K +DE      
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 141 --LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG---FSPDCVTYNTLIDAN 195
             + E G  PN V+ N ++K  C E ++++A +++  M E+G    +P+ VTYNT+ID  
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CKA  ++ A  ++  M  KG+K++ +T +TI+  LC  + +D A  +L     +G   D 
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y T+I G  + +  +RA  +   M ++ + P   TYN +I GL ++   ++A  +L  
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           ++   + PD  T+N +IHG+ S G+ ++ ++   +M  +   PD+VT ++LL  LC+ G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
             +A K F   I KG   +   Y  L+        + D   LL  M    + P+ Y +  
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +  A  +   ++EA    S M + G                 + P  ++Y   I+  C  
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHG-----------------LSPDVVTYGILIDALCKL 492

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           GR  DA+  F +    G+  N   + +L+ GL
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 190/373 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY  ++DAL K G++++     + M   G+ PN   +N LV G C +  
Sbjct: 470 MSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDR 529

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  +   M      P+V  +N ++   CN G +  A RL   ME + + P+V++YNT
Sbjct: 530 WEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNT 589

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI     +GR+ EA +L+D +   G+KP+ ++++ +++ YCK G+ID A  + R M   G
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTY+T++          EA  +   M + G + +  T N IL+ LC    +DEA+
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAF 709

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S   +    + +++  +I   F+  +   A+ L+  +    ++P+  TY  M+  +
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI 769

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  ++  ++   + +SG  PD    N II      G++ +A  + +K+ E +F  + 
Sbjct: 770 IQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEA 829

Query: 361 VTCNILLSGLCRE 373
            T ++L+S   RE
Sbjct: 830 STTSLLISLFSRE 842



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 199/416 (47%), Gaps = 43/416 (10%)

Query: 133 EAFKLIDELDEHGIKPNAVTH-----NIMIKWYCKE---------GKIDKACKIVRNMEE 178
           +A KL DEL  H  +P +V       N++ +  C            ++ +AC        
Sbjct: 32  DALKLFDELLPHA-RPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARAC-------S 83

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           N   PD  TY+ L    C+ G +E  F    ++ + G ++N + +N +L+ LC  K++DE
Sbjct: 84  NKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDE 143

Query: 239 AY-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER---QIMPSTFTYN 294
           A  +LL    + G   + VS  TL+ G   +++   AL+L   M E       P+  TYN
Sbjct: 144 AMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYN 203

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL ++   ++A  +L  ++  G+  D  T++TII G C    V++A      M++K
Sbjct: 204 TIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK 263

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KPD+VT N ++ GLC+   +++A    +  I KG   D VTYNT+I  LCK + ++ A
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
            G+L  M +K + PD  TY  +    + +G  +E  +    M   G              
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG-------------- 369

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              +DP  ++YS  ++  C  G+  +A +IF    +KGI  N + Y  L++G   R
Sbjct: 370 ---LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAAR 422


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 271/521 (52%), Gaps = 19/521 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ AL  +G++ +   +L +M ++G  P    Y++++   C+ G  + A+RV
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ +       DV   N+++N  C+ G ++EA  L +++ S    PDVV+YN ++     
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R     +L++E+      PN VT N +I + C+ G  ++  +++  M E+G +PD   
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 299

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G++E A  +++ M   GLK N +  NT+L  LC  ++ +E   LL    
Sbjct: 300 YATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +   LD+V++  L+  + ++   +R ++L ++M ER  MP   TY  +I G  + G  +
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLID 419

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G CS  +   A    ++M+++    + +T N L+
Sbjct: 420 EAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 479

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++E+A++  +  ++ G + D ++Y+T+I  L K  + ++A  LL+ M  K + 
Sbjct: 480 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539

Query: 428 PDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
           P+   Y++I +AL   GR+ +  Q F +I   T                  I   ++ Y+
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTT------------------IRSDAVLYN 581

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I+  C +G  + A++        G   N+STY  L+ GL
Sbjct: 582 AVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 228/424 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  FGC PD V+YN +L  L    +   V++L+ +M +    PN  T+N L+S  C+ G 
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +    V+  M ++   PD+  Y  +I+G C  G LE A  +   M S  L P+VV YNT
Sbjct: 278 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 337

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     + R  E  +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M E G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY T+I+  CK G ++EA  ++  M   G K NTI+   +L  LC  ++  +A 
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   ++G  L+ +++ TLI    +     +A++L  +M      P   +Y+ +I GL
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 517

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GKT++A+++LN ++  GM P+   +++I      EG++ K +Q  + + + + + D 
Sbjct: 518 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDA 577

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N ++S LC+ G  E+A++F    +  G   +  TY  LI  L  E  +++A  +L+E
Sbjct: 578 VLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637

Query: 421 MEEK 424
           +  K
Sbjct: 638 LCSK 641



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 255/511 (49%), Gaps = 23/511 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+ IL+A  + G       +L D+  +G   +    N++++  C  G + EA
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNA---GMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + ++  +      PDV +YN ++ G C A   G ++E   L +EM  +   P++VT+NTL
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTFNTL 268

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+    +G      +++ ++ EHG  P+   +  +I   CKEG ++ A +I+  M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ V YNTL+   C A   EE   ++  M  K   ++ +T N ++   C    +D    
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL    +RG   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL 
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            + +   A D++++++Q G   +  TFNT+I+  C +G VE+A++   +M+     PD++
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           + + ++ GL + G  ++AL+     + KG + +++ Y+++ S+L +E R+     +   +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           ++  +  D   Y A+ ++L + G  E A +F + MV +G +      PN S         
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV------PNES--------- 613

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             +Y+  I    S+G  K+A ++  E   KG
Sbjct: 614 --TYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 237/467 (50%), Gaps = 6/467 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC---KLGWL 61
           GC  D    N +L+A+  +G ++E   LL D+   G  P+  +YN ++ G C   + G +
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +E M   + M +    P++ T+N LI+  C  G+ E    +  +M      PD+  Y T+
Sbjct: 247 QELM---EEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 303

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+   + G    A ++++ +  +G+KPN V +N ++K  C   + ++  +++  M +   
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D VT+N L+D  C+ G ++    +++ M  +G   + IT  T+++  C E  +DEA M
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL S +  G   + +SY  ++ G    E+   A  L  +M ++    +  T+N +I  L 
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G  EQAI++L ++L +G  PD  +++T+I G    G+ ++AL+  N MV K   P+ +
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             + + S L REG + K ++ F +        D+V YN +ISSLCK    E A   L+ M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
                 P+  TY  +   L   G ++EAQ+  + +   G +   +++
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMK 650



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 244/518 (47%), Gaps = 20/518 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN ++    + G+L   R L + +    + PN  TY  +V   C  G + +A+ V+D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +    P    Y++++   C  G    A R+ +++ +     DV   N ++N   + G   
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L+ +L   G +P+ V++N ++K  C   +     +++  M      P+ VT+NTLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C+ G  E    ++  M   G   +     TI+  +C E  L+ A+ +LN     G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V Y TL+ G    E+     +L  EM ++       T+N ++    Q+G  ++ I++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L ++L+ G +PD  T+ T+I+GFC EG +++A+     M     KP+ ++  I+L GLC 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
                 A       I +G  ++ +T+NTLI+ LCK+  +E A  LL +M      PD  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y+ +   L ++G+ +EA +  ++MV  G                 + P++I YS   +  
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKG-----------------MSPNTIIYSSIASAL 552

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             +GR    +Q+F+  +   I  +   Y  +++ L KR
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 590



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 203/390 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C P+ VT+NT++  L + G    V ++L+ M + G  P+   Y  ++ G CK G 
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +++ M      P+V  YN L+ G C+A   EE   L  EM       D VT+N 
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F ++G      +L++++ E G  P+ +T+  +I  +CKEG ID+A  ++++M   G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ ++Y  ++   C A    +A  +M  M ++G  +N IT NT+++ LC +  +++A 
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   D +SY T+I G  +  K + AL+L + M  + + P+T  Y+++   L
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+  + I M + +  + +  D   +N +I   C  G+ E+A++F   MV     P+ 
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKG 390
            T  IL+ GL  EG +++A +       KG
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 167/569 (29%), Positives = 274/569 (48%), Gaps = 53/569 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG +P   TY  ++ A  K+G   E   L  +M   GL  N      L+ GYC LG 
Sbjct: 281 MREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGD 340

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+++ D + +   +PDV  +++LING    G +E+A+ L   M+ + + P+V   N+
Sbjct: 341 VNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNS 400

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F E      A+ L DE  EHGI  N VT+NI++KW  + GK+++AC +   M   G
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI------------------- 221
            +P  V+YN LI  +CK G M++A+ M+  +  +GLK N +                   
Sbjct: 460 ITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAF 519

Query: 222 ----------------TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
                           T NT+++ L    ++ E    LN+  K+G+    ++Y ++I G+
Sbjct: 520 VVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGF 579

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
           F++   + AL  + EM E  I P   TY ++I GL +S K   A++M +++   GM  D 
Sbjct: 580 FKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDV 639

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
             ++ +I GFC    +E A +F  ++++    P+ V  N ++SG      +E AL   + 
Sbjct: 640 VAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQE 699

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            I      D   Y ++I  L KE +L  A  L SEM  K + PD   Y  +   L  +G+
Sbjct: 700 MIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQ 759

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           LE A K   I+ E    N              I PS + Y+  I  +  +G  ++A ++ 
Sbjct: 760 LENASK---ILKEMDGNN--------------ITPSVLVYNILIAGNFREGNLQEAFRLH 802

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           +E   KG+  + +TY  L+NG +K   ++
Sbjct: 803 DEMLDKGLVPDDTTYDILVNGKLKVSHTL 831



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 236/504 (46%), Gaps = 18/504 (3%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           V  LL    + G   +   +N L+  + ++  + +A+     M ++  +P V   N L+ 
Sbjct: 134 VECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLT 193

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                 M+ +A +L  EM    +  D  T + ++    + G+  E  K   E    G++ 
Sbjct: 194 AMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEV 253

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +A  ++I+++  C+   ++ AC++++ M E G+ P   TY  +I A  K GN  EA R+ 
Sbjct: 254 DAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLK 313

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M   GL MN I   +++   C    ++ A  L +   + G   D V +  LI G  + 
Sbjct: 314 DEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKV 373

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
               +A +L+  MK   I P+ F  N+++ G  +    E A  + +E ++ G I +  T+
Sbjct: 374 GDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTY 432

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N ++      G+V +A     KMV K   P +V+ N L+ G C++G ++KA    +S + 
Sbjct: 433 NILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILE 492

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   ++VTY  LI    K+   E AF +  +M    + P  +T+  +   L ++GR+ E
Sbjct: 493 RGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSE 552

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
            Q          K+N+ + Q   S        +SI+Y+  I+    +G    AL  + E 
Sbjct: 553 TQD---------KLNNFIKQGFVS--------TSITYNSIIDGFFKEGAVDSALLAYREM 595

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            + GI+ +  TY +L++GL K  K
Sbjct: 596 CESGISPDVITYTSLIDGLCKSNK 619



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 179/390 (45%), Gaps = 18/390 (4%)

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
           +G + ++   N ++K + +  KI  A +  R M E+   P     N L+ A  +   + +
Sbjct: 144 YGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCD 203

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A ++ D M  +G+  +  TL+ ++     E K +E       A  RG  +D  +Y  L+ 
Sbjct: 204 ARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQ 263

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              R    N A +L  EM+E   +PS  TY A+I    + G   +A+ + +E++  G+  
Sbjct: 264 AVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPM 323

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           +     +++ G+C  G V  ALQ  +++VE    PD+V  ++L++G  + G +EKA + +
Sbjct: 324 NVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELY 383

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               L G   +    N+L+    ++  LE A+GL  E  E  +  +  TY  +   L E 
Sbjct: 384 TRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGEL 442

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G++ EA      MV  G                 I PS +SY+  I  HC +G    A  
Sbjct: 443 GKVNEACNLWEKMVSKG-----------------ITPSLVSYNNLILGHCKKGCMDKAYS 485

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           + +   ++G+  N  TY  L++G  K+  S
Sbjct: 486 MLKSILERGLKPNAVTYTLLIDGFFKKGDS 515


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 276/544 (50%), Gaps = 19/544 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+   YN ++  L ++ ++ +   +  +M    LV +  TYN L+ GYCK+G 
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A ++ + M +    P++ T+N L++G C    ++EA  L KEME    +PD  TY+ 
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L +          A +L ++  E GI+ N  T +I++   CK+GK++KA +I++   ENG
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V YNT ++  C+ G+M +A   ++ M   GL+ N+IT N+++   C  K++D+A 
Sbjct: 382 LVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE 441

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +   +++G      +Y TLI GY +    +R  ++ ++M+E  + P+  +Y ++I  L
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL 501

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK  +A  +L +++  G++P+   +N +I G C  G+V+ AL+F ++M+     P +
Sbjct: 502 CKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTL 561

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L+ GLC++G L +A  F       G + D +TYN+LIS       +    GL   
Sbjct: 562 VTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYET 621

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ----------PN 470
           M+   + P   TY  + +   + G +E  +K  + M++   +  +VV            N
Sbjct: 622 MKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGN 680

Query: 471 TSKT--------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
           T K          + I P  ++Y+  I  H  +G+  +   +    + K +A    TY  
Sbjct: 681 TQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDI 740

Query: 523 LMNG 526
           L+ G
Sbjct: 741 LVKG 744



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 238/456 (52%), Gaps = 1/456 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           +N T + +L+ L K+GK+ +  ++L    + GLV +   YN  V+GYC++G + +A+  +
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P+  T+N LI+ +C+   +++A    K+M    + P V TYNTLI+ + + 
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
                 F+++++++E G+KPN V++  +I   CK+GKI +A  ++R+M   G  P+   Y
Sbjct: 470 CTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVY 529

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LID +C  G +++A R  D M R  +    +T N ++  LC + KL EA   L   + 
Sbjct: 530 NMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G+  D ++Y +LI+GY      ++ L L++ MK   I P+  TY+ +I G S+ G  E 
Sbjct: 590 SGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IEL 648

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
              + NE+LQ  ++PD   +N +IH +   G  +KA   H  M+++   PD +T N L+ 
Sbjct: 649 VEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLIL 708

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G  REG L        +   K  A  + TY+ L+   C  +    A+    EM E    P
Sbjct: 709 GHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLP 768

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           +      +   L + GRL+E Q   S M   G INH
Sbjct: 769 NASICNELTAGLEQEGRLQEVQVICSEMNVKGIINH 804



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 249/502 (49%), Gaps = 17/502 (3%)

Query: 28  EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
           +V DL  +++  G   +   Y   +    KL  LK  M  +D M +    P+V+ YN+LI
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
            G C    + +A ++  EM ++ L+  +VTYNTLI+ + + G    AFK+ + + E  + 
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           PN +T N ++   CK  K+ +A  +++ ME NGF PD  TY+ L D   +  +   A  +
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            +    KG+++N  T + +L+ LC + K+++A  +L   ++ G   DEV Y T + GY R
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
               N+A+   + M+   + P++ T+N++I       + ++A + + ++ + G+ P   T
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +NT+I G+      ++  Q   +M E   KP++V+   L++ LC++G + +A    R  I
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI 518

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G   ++  YN LI   C   +++DA     EM   ++ P   TY  +   L + G+L 
Sbjct: 519 CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLT 578

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA+ F + +  +G                   P  I+Y+  I+ + + G     L ++E 
Sbjct: 579 EAEDFLTQITSSGH-----------------SPDVITYNSLISGYANAGNVSKCLGLYET 621

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
            +  GI     TY  L++G  K
Sbjct: 622 MKNLGIKPTVRTYHPLISGCSK 643



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 251/524 (47%), Gaps = 17/524 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           +   Y+     +  K   +   DL S      +    T  ++L+S  CK   L+EA+ + 
Sbjct: 70  NEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELY 129

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M ++  LP + + ++L +   N     +   L  E+E+     D   Y   I    + 
Sbjct: 130 EFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKL 189

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
                  + +D + + G++PN   +N++I   C+E +I  A K+   M         VTY
Sbjct: 190 QNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTY 249

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTLID  CK G ++ AF+M + M  K +  N IT N++L  LC  +K+ EA  LL     
Sbjct: 250 NTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEV 309

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G+  D  +Y  L  G  R +  N A++L+++  E+ I  + +T + ++ GL + GK E+
Sbjct: 310 NGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEK 369

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A ++L +  ++G++ DE  +NT ++G+C  G + KA+    +M     +P+ +T N L+ 
Sbjct: 370 AEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLID 429

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
             C    ++KA ++ +    KG      TYNTLI    K    +  F +L +MEE  + P
Sbjct: 430 KFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKP 489

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  +Y ++   L + G++ EA+     M+  G +                 P++  Y+  
Sbjct: 490 NVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL-----------------PNAQVYNML 532

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+  C  G+ KDAL+ F+E  +  I+    TY  L++GL K+ K
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +TYN+++   F++GKL+ ++DL+++MK + L P   TY+ILV G+C L     A
Sbjct: 695 GIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGA 754

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
                 M +N  LP+    N L  G    G L+E   +  EM
Sbjct: 755 YVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEM 796



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD V YN ++    + G   +   L   M  QG+ P++ TYN L+ G+ + G L     
Sbjct: 662 LPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKD 721

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +V+ M   +  P   TY++L+ G C+      A+   +EM     LP+    N L     
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLE 781

Query: 127 ESGRSMEAFKLIDELDEHGI 146
           + GR  E   +  E++  GI
Sbjct: 782 QEGRLQEVQVICSEMNVKGI 801


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 269/552 (48%), Gaps = 50/552 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           VTY  ++    K+ K++E   +L  M+++  LVP+   Y +L+ GYC+ G + +A+R++D
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M +     +++  N LING+C  G + EA  +   M    L PD  +YNTL++ +   G
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREG 416

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
            + EAF L D++ + GI+P  +T+N ++K  C+ G  D A +I   M + G +PD V Y+
Sbjct: 417 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYS 476

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TL+D   K  N E A  +   +  +G   + IT NT++  LC   K+ EA  + +     
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D ++Y TLI GY +     +A K+   M+   I PS   YN++I GL +S +  + 
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 596

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            D+L E+   G+ P+  T+  +I G+C EG ++KA   + +M E     +I+ C+ ++SG
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 370 LCREGILEKALKFFRSWILKG-------------------KAVDS-------------VT 397
           L R G +++A    +  +  G                   K  DS             + 
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 716

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN  I+ LCK  +++DA    S +  K   PD +TY  +      +G ++EA +    M+
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
             G +                 P+ ++Y+  IN  C       A ++F +  QKG+  N 
Sbjct: 777 RRGLV-----------------PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 518 STYMNLMNGLIK 529
            TY  L++G  K
Sbjct: 820 VTYNTLIDGYCK 831



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 227/454 (50%), Gaps = 32/454 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y+T+LD LFK         L  D+  +G   +R T+N ++SG CK+G + EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M      PD  TY  LI+G+C A  + +AF+++  ME   + P +  YN+LI+ 
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+S R +E   L+ E+   G+ PN VT+  +I  +CKEG +DKA      M ENG S +
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKG----------------------------- 215
            +  +T++    + G ++EA  +M  M   G                             
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 706

Query: 216 ---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              L  N I  N  +  LC   K+D+A    +  S +G+  D  +Y TLI GY      +
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L DEM  R ++P+  TYNA+I GL +S   ++A  + ++L Q G+ P+  T+NT+I
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G+C  G ++ A +  +KM+E+   P +VT + L++GLC+ G +E+++K     I  G  
Sbjct: 827 DGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVD 886

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
              + Y TL+    +   ++    L   M  + L
Sbjct: 887 SKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCL 920



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 166/573 (28%), Positives = 262/573 (45%), Gaps = 51/573 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P   + N++L+ L K G+ +    +   M + G+VP+    +I+V+ +CK G + EA
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
              V  M      P++ TY+ LING+ + G +E A  + K M                  
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305

Query: 107 ------------------ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                             E   L+PD   Y  LI+ +  +G+  +A +L+DE+   G+K 
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 365

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N    N +I  YCK G+I +A  ++  M +    PD  +YNTL+D  C+ G+  EAF + 
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M ++G++   +T NT+L  LC     D+A  + +   KRG   DEV Y TL+ G F+ 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 485

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           E    A  LW ++  R    S  T+N MI GL + GK  +A ++ +++   G  PD  T+
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            T+I G+C    V +A +    M  +   P I   N L+SGL +   L +         +
Sbjct: 546 RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 605

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   + VTY  LI   CKE  L+ AF    EM E  L  +    + + + L   GR++E
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 449 AQKFTSIMVETG-----------KINHQVVQPNTSKTPEE----IDPSSISYSEKINEHC 493
           A      MV+ G            I +  +Q       E     + P++I Y+  I   C
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
             G+  DA + F     KG   +  TY  L++G
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 758



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 259/519 (49%), Gaps = 18/519 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            ++ IL    +KG       +  +M K G +P+  + N L++   K G    A  V   M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   +PDV+  ++++N +C  G ++EA    K+ME+L + P++VTY++LIN +   G  
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNT 190
             A  ++  + E G+  N VT+ ++IK YCK+ K+D+A K++R M EE    PD   Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  C+ G +++A R++D M R GLK N    N++++  C   ++ EA  ++       
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  SY TL+ GY R+   + A  L D+M +  I P+  TYN ++ GL + G  + A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + + +++ G+ PDE  ++T++ G       E A      ++ + F    +T N ++SGL
Sbjct: 458 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G + +A + F      G + D +TY TLI   CK   +  AF +   ME + + P  
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 577

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y ++ + L +S RL E    T ++ E G                 + P+ ++Y   I+
Sbjct: 578 EMYNSLISGLFKSRRLVEV---TDLLTEMG--------------IRGLTPNIVTYGALID 620

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             C +G    A   + E  + G++ N      +++GL +
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 659



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/590 (26%), Positives = 263/590 (44%), Gaps = 84/590 (14%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD   Y  ++D   + GK+++   LL +M + GL  N    N L++GYCK G + EA  
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M      PD ++YN L++G+C  G   EAF L  +M    + P V+TYNTL+    
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAV----------------------------------- 151
             G   +A ++   + + G+ P+ V                                   
Sbjct: 449 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T N MI   CK GK+ +A +I   M++ G SPD +TY TLID  CKA N+ +AF++   M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            R+ +  +    N+++  L   ++L E   LL     RG   + V+YG LI G+ ++   
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF--- 328
           ++A   + EM E  +  +    + M+ GL + G+ ++A  ++ +++  G  PD   F   
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688

Query: 329 -----------------------------NTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
                                        N  I G C  G+V+ A +F + +  K F PD
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T   L+ G    G +++A +     + +G   + VTYN LI+ LCK   ++ A  L  
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           ++ +K L P+  TY  +     + G ++ A K    M+E G                 I 
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG-----------------IS 851

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           PS ++YS  IN  C  G  + ++++  +  + G+      Y  L+ G I+
Sbjct: 852 PSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIR 901



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 260/554 (46%), Gaps = 54/554 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDL---LSDMKKQGLVPNRTTYNILVSGYCKL------GWL 61
           V  + I+DA+ +  +LN    L       K+Q   PN       V  YCKL      G +
Sbjct: 65  VFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPN-------VKSYCKLVHILSRGRM 117

Query: 62  KEAMR-----VVDLMTQNKSLPDVW---------------TYNMLINGWCNAGMLEEAFR 101
            +  R     +VDL         +W                ++M++  +   G+ + A  
Sbjct: 118 YDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALY 177

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           +   M     +P + + N+L+N   ++G +  A  +  ++   GI P+    +IM+  +C
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K+GK+D+A   V+ ME  G  P+ VTY++LI+     G++E A  ++  M  KG+  N +
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYL-DEVSYGTLITGYFRDEKANRALKLWDE 280
           T   ++   C + K+DEA  +L    +    + DE +YG LI GY R  K + A++L DE
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M    +  + F  N++I G  + G+  +A  ++  ++   + PD  ++NT++ G+C EG 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
             +A    +KM+++  +P ++T N LL GLCR G  + AL+ +   + +G A D V Y+T
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+  L K    E A  L  ++  +     R T+  + + L + G++ EA++    M + G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                              P  I+Y   I+ +C       A ++     ++ I+ +   Y
Sbjct: 538 -----------------CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 580

Query: 521 MNLMNGLIKRRKSI 534
            +L++GL K R+ +
Sbjct: 581 NSLISGLFKSRRLV 594



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 158/353 (44%), Gaps = 67/353 (18%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNIL---------------- 51
           P    YN+++  LFK  +L EV DLL++M  +GL PN  TY  L                
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 52  -------------------VSGYCKLGWLKEAMRVVDLMTQNKSLPDV------------ 80
                              VSG  +LG + EA  ++  M  +   PD             
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 81  --------------------WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
                                 YN+ I G C  G +++A R    +     +PD  TY T
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +  +G   EAF+L DE+   G+ PN VT+N +I   CK   +D+A ++   + + G
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYNTLID  CK GNM+ AF++ D M  +G+  + +T + +++ LC    ++ + 
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSM 874

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            LLN   K G     + Y TL+ GY R  +  +  KL+D M  R +  +  ++
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 124/216 (57%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+N+ YN  +  L K GK+++ R   S +  +G VP+  TY  L+ GY   G + EA R
Sbjct: 711 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M +   +P++ TYN LING C +  ++ A RL  ++    L P+VVTYNTLI+ + 
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G    AFKL D++ E GI P+ VT++ +I   CK G I+++ K++  M + G     +
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            Y TL+    ++G M++  ++ D+M  + L    I+
Sbjct: 891 EYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAIS 926


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 238/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T N ++++     +      +L+ + K GL P+  T+  L+ G C  G 
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ + D M      P+V TY  LING C  G    A RL + ME     PDVV Y +
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  ++   GI P+  T+  +I   C   +      ++  M  + 
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V ++T++DA CK G + EA  ++D+M  +G++ N +T N ++   C + ++DEA 
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++    GY  + +SY TLI GY + ++ ++A  L++EM +++++P+T TYN ++ GL
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G IPD  T+  ++   C +  +++A+     +   +  PDI
Sbjct: 393 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
               I++ G+CR G LE A   F +   KG   +  TY  +I+ LC+   L++A  L  E
Sbjct: 453 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+     PD  TY  I   L+++     A +    M+  G
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 242/494 (48%), Gaps = 21/494 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+   +N L++   K         + + M      PDV+T N+LIN +C+      AF +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++  L L PD  T+ TLI      G+  +A  L D++   G +PN VT+  +I   CK
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G  + A +++R+ME+    PD V Y ++ID+ CK   + EAF +   M  +G+  +  T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 223 LNTILHTLC--CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
             +++H+LC  CE K      LLN         D V + T++    ++ K   A  + D 
Sbjct: 245 YTSLIHSLCNLCEWK--HVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 302

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  R + P+  TYNA++ G     + ++A+ + + ++ +G  P+  ++NT+I+G+C   +
Sbjct: 303 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 362

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           ++KA     +M +K   P+ VT N L+ GLC  G L+ A+  F   +  G+  D  TY  
Sbjct: 363 MDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRI 422

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+  LCK+  L++A  LL  +E   + PD   Y  +   +  +G LE A+   S +   G
Sbjct: 423 LLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 482

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                 ++PN             +Y+  IN  C +G   +A ++F E    G + +  TY
Sbjct: 483 ------LRPNVR-----------TYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525

Query: 521 MNLMNGLIKRRKSI 534
             +  GL++ ++++
Sbjct: 526 NTITQGLLQNKEAL 539



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 211/429 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ +   L   M  +G  PN  TY  L++G CK+G    
Sbjct: 131 LGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNA 190

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    PDV  Y  +I+  C    + EAF L  +M    + PD+ TY +LI+
Sbjct: 191 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 250

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++++    I P+ V  + ++   CKEGKI +A  +V  M   G  P
Sbjct: 251 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 310

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN L+D +C    M+EA ++ D M   G   N I+ NT+++  C  +++D+A  L 
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 370

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++    + V+Y TL+ G     +   A+ L+ EM     +P   TY  ++  L + 
Sbjct: 371 EEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKK 430

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A+ +L  +  S M PD   +  +I G C  G++E A    + +  K  +P++ T 
Sbjct: 431 SHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTY 490

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            I+++GLCR G+L++A K F      G + D  TYNT+   L + +    A  LL EM  
Sbjct: 491 TIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLA 550

Query: 424 KKLGPDRYT 432
           +    D  T
Sbjct: 551 RGFSADVST 559



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 224/472 (47%), Gaps = 21/472 (4%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+   + M      P    +N L+            F L  +M+S  + PDV T N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    R   AF ++ ++ + G++P+  T   +I+  C EGKI  A  +   M   G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+ VTY TLI+  CK GN   A R++  M +   + + +   +I+ +LC ++++ EA+
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   D  +Y +LI       +      L ++M   +IMP    ++ ++  L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK  +A D+++ ++  G+ P+  T+N ++ G C + ++++A++  + MV   + P++
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++ N L++G C+   ++KA   F     K    ++VTYNTL+  LC   RL+DA  L  E
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE--EI 478
           M      PD  TY  +   L +   L+EA                       KT E   +
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALL-------------------KTIEGSNM 448

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           DP    Y+  I+  C  G  + A  IF     KG+  N  TY  ++NGL +R
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRR 500



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 169/312 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V ++T++DAL K+GK+ E  D++  M  +G+ PN  TYN L+ G+C    + EA++
Sbjct: 274 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 333

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M  N   P+V +YN LING+C    +++A  L +EM   +L+P+ VTYNTL++   
Sbjct: 334 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLC 393

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L  E+  HG  P+  T+ I++ + CK+  +D+A  +++ +E +   PD  
Sbjct: 394 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 453

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y  +ID  C+AG +E A  +   +  KGL+ N  T   +++ LC    LDEA  L    
Sbjct: 454 IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   D  +Y T+  G  ++++A RA++L  EM  R       T   ++  L      
Sbjct: 514 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLD 573

Query: 307 EQAIDMLNELLQ 318
           +    +L+E +Q
Sbjct: 574 QSVKQILSEFVQ 585



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 173/353 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  TY +++ +L    +   V  LL+ M    ++P+   ++ +V   CK G 
Sbjct: 233 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 292

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  VVD+M      P+V TYN L++G C    ++EA ++   M      P+V++YNT
Sbjct: 293 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + +  R  +A  L +E+ +  + PN VT+N ++   C  G++  A  +   M  +G
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  L+D  CK  +++EA  ++  +    +  +      ++  +C   +L+ A 
Sbjct: 413 QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 472

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++ S +G   +  +Y  +I G  R    + A KL+ EM      P   TYN +  GL
Sbjct: 473 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGL 532

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            Q+ +  +AI +L E+L  G   D +T   ++   C +   +   Q  ++ V+
Sbjct: 533 LQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 162/358 (45%), Gaps = 27/358 (7%)

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           ++  N F    + +NTL DA      +    RM+ +        +T+  N +L ++   K
Sbjct: 32  SLSHNRFHSKSLNFNTLDDA------LSSFNRMLHMHPPP----STVDFNRLLTSIAKTK 81

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +    + L N     G   D  +   LI  +    +   A  +  ++ +  + P T T+ 
Sbjct: 82  QYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFT 141

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL   GK   A+ + ++++  G  P+  T+ T+I+G C  G    A++    M + 
Sbjct: 142 TLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQG 201

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           + +PD+V    ++  LC++  + +A   F   + +G + D  TY +LI SLC     +  
Sbjct: 202 NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHV 261

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL++M   K+ PD   ++ +  AL + G++ EA     +M+  G              
Sbjct: 262 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG-------------- 307

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              ++P+ ++Y+  ++ HC Q    +A+++F+     G A N  +Y  L+NG  K ++
Sbjct: 308 ---VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 362


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 269/552 (48%), Gaps = 50/552 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           VTY  ++    K+ K++E   +L  M+++  LVP+   Y +L+ GYC+ G + +A+R++D
Sbjct: 263 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 322

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M +     +++  N LING+C  G + EA  +   M    L PD  +YNTL++ +   G
Sbjct: 323 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREG 382

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
            + EAF L D++ + GI+P  +T+N ++K  C+ G  D A +I   M + G +PD V Y+
Sbjct: 383 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYS 442

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TL+D   K  N E A  +   +  +G   + IT NT++  LC   K+ EA  + +     
Sbjct: 443 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 502

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D ++Y TLI GY +     +A K+   M+   I PS   YN++I GL +S +  + 
Sbjct: 503 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 562

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            D+L E+   G+ P+  T+  +I G+C EG ++KA   + +M E     +I+ C+ ++SG
Sbjct: 563 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 622

Query: 370 LCREGILEKALKFFRSWILKG-------------------KAVDS-------------VT 397
           L R G +++A    +  +  G                   K  DS             + 
Sbjct: 623 LYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 682

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN  I+ LCK  +++DA    S +  K   PD +TY  +      +G ++EA +    M+
Sbjct: 683 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
             G +                 P+ ++Y+  IN  C       A ++F +  QKG+  N 
Sbjct: 743 RRGLV-----------------PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 785

Query: 518 STYMNLMNGLIK 529
            TY  L++G  K
Sbjct: 786 VTYNTLIDGYCK 797



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 166/573 (28%), Positives = 262/573 (45%), Gaps = 51/573 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P   + N++L+ L K G+ +    +   M + G+VP+    +I+V+ +CK G + EA
Sbjct: 152 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 211

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
              V  M      P++ TY+ LING+ + G +E A  + K M                  
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271

Query: 107 ------------------ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                             E   L+PD   Y  LI+ +  +G+  +A +L+DE+   G+K 
Sbjct: 272 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 331

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N    N +I  YCK G+I +A  ++  M +    PD  +YNTL+D  C+ G+  EAF + 
Sbjct: 332 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 391

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M ++G++   +T NT+L  LC     D+A  + +   KRG   DEV Y TL+ G F+ 
Sbjct: 392 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 451

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           E    A  LW ++  R    S  T+N MI GL + GK  +A ++ +++   G  PD  T+
Sbjct: 452 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 511

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            T+I G+C    V +A +    M  +   P I   N L+SGL +   L +         +
Sbjct: 512 RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 571

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   + VTY  LI   CKE  L+ AF    EM E  L  +    + + + L   GR++E
Sbjct: 572 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 631

Query: 449 AQKFTSIMVETG-----------KINHQVVQPNTSKTPEE----IDPSSISYSEKINEHC 493
           A      MV+ G            I +  +Q       E     + P++I Y+  I   C
Sbjct: 632 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 691

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
             G+  DA + F     KG   +  TY  L++G
Sbjct: 692 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 724



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 259/519 (49%), Gaps = 18/519 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            ++ IL    +KG       +  +M K G +P+  + N L++   K G    A  V   M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   +PDV+  ++++N +C  G ++EA    K+ME+L + P++VTY++LIN +   G  
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNT 190
             A  ++  + E G+  N VT+ ++IK YCK+ K+D+A K++R M EE    PD   Y  
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  C+ G +++A R++D M R GLK N    N++++  C   ++ EA  ++       
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  SY TL+ GY R+   + A  L D+M +  I P+  TYN ++ GL + G  + A+
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + + +++ G+ PDE  ++T++ G       E A      ++ + F    +T N ++SGL
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G + +A + F      G + D +TY TLI   CK   +  AF +   ME + + P  
Sbjct: 484 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 543

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y ++ + L +S RL E    T ++ E G                 + P+ ++Y   I+
Sbjct: 544 EMYNSLISGLFKSRRLVEV---TDLLTEMG--------------IRGLTPNIVTYGALID 586

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             C +G    A   + E  + G++ N      +++GL +
Sbjct: 587 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 625



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 207/408 (50%), Gaps = 34/408 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y+T+LD LFK         L  D+  +G   +R T+N ++SG CK+G + EA
Sbjct: 433 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 492

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M      PD  TY  LI+G+C A  + +AF+++  ME   + P +  YN+LI+ 
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 552

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+S R +E   L+ E+   G+ PN VT+  +I  +CKEG +DKA      M ENG S +
Sbjct: 553 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 612

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKG----------------------------- 215
            +  +T++    + G ++EA  +M  M   G                             
Sbjct: 613 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 672

Query: 216 ---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              L  N I  N  +  LC   K+D+A    +  S +G+  D  +Y TLI GY      +
Sbjct: 673 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 732

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L DEM  R ++P+  TYNA+I GL +S   ++A  + ++L Q G+ P+  T+NT+I
Sbjct: 733 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 792

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS-GLCREGILEKA 379
            G+C  G ++ A +  +KM+E+   P I  CN+L S  +   GIL K+
Sbjct: 793 DGYCKIGNMDAAFKLKDKMIEEGISPSI-QCNLLESVSMWLVGILPKS 839



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 232/471 (49%), Gaps = 44/471 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+ +YNT+LD   ++G  +E  +L   M ++G+ P   TYN L+ G C++G   +A+++
Sbjct: 366 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 425

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM +    PD   Y+ L++G       E A  L K++ +       +T+NT+I+   +
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 485

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G+ +EA ++ D++ + G  P+ +T+  +I  YCK   + +A K+   ME          
Sbjct: 486 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 545

Query: 179 --------------------------NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                      G +P+ VTY  LID  CK G +++AF     M 
Sbjct: 546 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 605

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             GL  N I  +T++  L    ++DEA +L+      G++ D   +      Y   +K  
Sbjct: 606 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 665

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            +L   DE  +  ++P+   YN  I GL ++GK + A    + L   G +PD  T+ T+I
Sbjct: 666 DSL---DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 722

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG+ + G V++A +  ++M+ +   P+IVT N L++GLC+   +++A + F     KG  
Sbjct: 723 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 782

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            + VTYNTLI   CK   ++ AF L  +M E+ + P      +I   L+ES
Sbjct: 783 PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP------SIQCNLLES 827



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 256/543 (47%), Gaps = 55/543 (10%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD   Y  ++D   + GK+++   LL +M + GL  N    N L++GYCK G + EA  
Sbjct: 295 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 354

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M      PD ++YN L++G+C  G   EAF L  +M    + P V+TYNTL+    
Sbjct: 355 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 414

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAV----------------------------------- 151
             G   +A ++   + + G+ P+ V                                   
Sbjct: 415 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 474

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T N MI   CK GK+ +A +I   M++ G SPD +TY TLID  CKA N+ +AF++   M
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            R+ +  +    N+++  L   ++L E   LL     RG   + V+YG LI G+ ++   
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           ++A   + EM E  +  +    + M+ GL + G+ ++A  ++ +++  G  PD   F   
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF--- 651

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +        ++K     ++  +    P+ +  NI ++GLC+ G ++ A +FF    LKG 
Sbjct: 652 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 711

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D+ TY TLI        +++AF L  EM  + L P+  TY A+   L +S  ++ AQ+
Sbjct: 712 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 771

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               + + G                 + P+ ++Y+  I+ +C  G    A ++ ++  ++
Sbjct: 772 LFHKLHQKG-----------------LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814

Query: 512 GIA 514
           GI+
Sbjct: 815 GIS 817



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 260/554 (46%), Gaps = 54/554 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDL---LSDMKKQGLVPNRTTYNILVSGYCKL------GWL 61
           V  + I+DA+ +  +LN    L       K+Q   PN       V  YCKL      G +
Sbjct: 31  VFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPN-------VKSYCKLVHILSRGRM 83

Query: 62  KEAMR-----VVDLMTQNKSLPDVW---------------TYNMLINGWCNAGMLEEAFR 101
            +  R     +VDL         +W                ++M++  +   G+ + A  
Sbjct: 84  YDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALY 143

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           +   M     +P + + N+L+N   ++G +  A  +  ++   GI P+    +IM+  +C
Sbjct: 144 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 203

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K+GK+D+A   V+ ME  G  P+ VTY++LI+     G++E A  ++  M  KG+  N +
Sbjct: 204 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 263

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYL-DEVSYGTLITGYFRDEKANRALKLWDE 280
           T   ++   C + K+DEA  +L    +    + DE +YG LI GY R  K + A++L DE
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M    +  + F  N++I G  + G+  +A  ++  ++   + PD  ++NT++ G+C EG 
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
             +A    +KM+++  +P ++T N LL GLCR G  + AL+ +   + +G A D V Y+T
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+  L K    E A  L  ++  +     R T+  + + L + G++ EA++    M + G
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                              P  I+Y   I+ +C       A ++     ++ I+ +   Y
Sbjct: 504 -----------------CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 546

Query: 521 MNLMNGLIKRRKSI 534
            +L++GL K R+ +
Sbjct: 547 NSLISGLFKSRRLV 560



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 159/321 (49%), Gaps = 32/321 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD +TY T++D   K   + +   +   M+++ + P+   YN L+SG  K   
Sbjct: 499 MKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRR 558

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++  M      P++ TY  LI+GWC  GML++AF    EM    L  +++  +T
Sbjct: 559 LVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 618

Query: 121 LINRFFESGRSMEAFKLIDELDEHG--------------------------------IKP 148
           +++  +  GR  EA  L+ ++ +HG                                + P
Sbjct: 619 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLP 678

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N + +NI I   CK GK+D A +    +   GF PD  TY TLI     AGN++EAFR+ 
Sbjct: 679 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 738

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M R+GL  N +T N +++ LC  + +D A  L +   ++G + + V+Y TLI GY + 
Sbjct: 739 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 798

Query: 269 EKANRALKLWDEMKERQIMPS 289
              + A KL D+M E  I PS
Sbjct: 799 GNMDAAFKLKDKMIEEGISPS 819


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 263/529 (49%), Gaps = 19/529 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC P   +YNT+L+A  +  + +         +   + PN  TYNIL+   CK   +++
Sbjct: 110 FGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEK 169

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ ++D M      PDV++Y  LING    G L  A ++  EM    ++ DV  YN LI+
Sbjct: 170 AISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLID 229

Query: 124 RFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
            FF+ G   +  ++ + L  +  + PN VT+NIMI   CK G+ D++ +I   M +N   
Sbjct: 230 GFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNERE 289

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            D  TY++LI   C+AGN++ A R+   +    L ++ +T N +L+  C   K+ E++ L
Sbjct: 290 KDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFEL 349

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                K       VSY  LI G F + K   A+ +W+ + ++   P + TY  +I GL +
Sbjct: 350 WMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCK 408

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G+  +A+ +  E        D   +++++ G C EG++++A+   N+M ++ +K D   
Sbjct: 409 NGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHV 468

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           CN L++G  R   LE A+ FFR    KG +   V+YNTLI  LCK  R  +A+  + EM 
Sbjct: 469 CNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEML 528

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           EK+  PD  T + +   L +  ++E A       ++ G                   P  
Sbjct: 529 EKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKG-----------------FKPDI 571

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             Y+  ++  CS  + +DALQ++   ++     N  T   LM GL K R
Sbjct: 572 TMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVR 620



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 266/528 (50%), Gaps = 21/528 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  +Y T+++ + K G L     +  +M  +G+V + T YN+L+ G+ K G   +   +
Sbjct: 184 PDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEI 243

Query: 68  VDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            + + ++ S+ P+V TYN++ING C  G  +E+  + + M   +   D+ TY++LI+   
Sbjct: 244 WERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLC 303

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDC 185
           E+G    A ++  E+ E  +  +AVTHN M+  +C+ GKI ++ ++   M +EN      
Sbjct: 304 EAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN--CQTV 361

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V+YN LI    + G +EEA  + +++ +KG +  + T   ++H LC   +L++A  +   
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE 421

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
           A      LD  +Y +++ G  ++ + + A+ + ++M +R         N +I G  ++ K
Sbjct: 422 AEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E AI+   E+   G  P   ++NT+I G C   +  +A  F  +M+EK +KPD++TC++
Sbjct: 482 LEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSL 541

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GLC+E  +E AL  ++  + KG   D   YN L+  LC   +LEDA  L S M+   
Sbjct: 542 LMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRST 601

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  T   +   L +    E+A +    +++ G                 + P  ISY
Sbjct: 602 CVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDG-----------------LHPDIISY 644

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +  I   CS  R  DA++   +   +GI     T+  L+   +  R S
Sbjct: 645 NITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFRTS 692



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 207/408 (50%), Gaps = 25/408 (6%)

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S ++++ F+ + ++   G KP   ++N ++  + +  + D+A    R  E    SP+  T
Sbjct: 96  SNKALDTFQNMQDI--FGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQT 153

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI  +CK   +E+A  ++D M  + LK +  +  T+++ +     L  A  + +  S
Sbjct: 154 YNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMS 213

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKT 306
            RG   D   Y  LI G+F+    ++  ++W+ + K+  + P+  TYN MI GL + G+ 
Sbjct: 214 VRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRF 273

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++++++   + ++    D  T++++IHG C  G ++ A++ + ++VE S   D VT N +
Sbjct: 274 DESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAM 333

Query: 367 LSGLCREGILEKALKFFRSWILKGK--AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           L+G CR G ++++   F  W++ GK      V+YN LI  L +  ++E+A  +   + +K
Sbjct: 334 LNGFCRAGKIKES---FELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKK 390

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY  +   L ++GRL +A K               +       P ++D  + +
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALK---------------IFKEAEDGPGKLD--AYA 433

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           YS  ++  C +GR  +A+ I  +  ++G  ++      L+NG ++  K
Sbjct: 434 YSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 103/194 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P  V+YNT++  L K  + +E    + +M ++   P+  T ++L+ G C+   
Sbjct: 492 MECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKK 551

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+ +          PD+  YN+L++G C+   LE+A +L   M+    +P++VT NT
Sbjct: 552 IEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNT 611

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+   ++     +A ++ D + + G+ P+ +++NI IK  C   +I  A + + +    G
Sbjct: 612 LMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRG 671

Query: 181 FSPDCVTYNTLIDA 194
             P  VT+N L+ A
Sbjct: 672 ILPTAVTWNILVRA 685


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 264/507 (52%), Gaps = 18/507 (3%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           FK+       D+   +  +G+ P++TT NIL++   +    ++     D++ +  S PDV
Sbjct: 202 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDV 260

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           + +   IN +C  G +EEA +L  +ME   + P+VVT+NT+I+     GR  EAF   ++
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E G++P  +T++I++K   +  +I  A  +++ M + GF P+ + YN LID+  +AG+
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + +A  + D+M  KGL + + T NT++   C   + D A  LL      G+ +++ S+ +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I         + AL+   EM  R + P       +I GL + GK  +A+++  + L  G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            + D  T N ++HG C  G++++A +   +++ +    D V+ N L+SG C +  L++A 
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
            F    + +G   D+ TY+ LI  L    ++E+A     + +   + PD YTY+ +    
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++ R EE Q+F   M+         VQPNT           + Y+  I  +C  GR   
Sbjct: 621 CKAERTEEGQEFFDEMMSKN------VQPNT-----------VVYNHLIRAYCRSGRLSM 663

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           AL++ E+ + KGI+ N +TY +L+ G+
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGM 690



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 268/562 (47%), Gaps = 54/562 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   + T ++A  K GK+ E   L S M++ G+ PN  T+N ++ G    G   EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + M +    P + TY++L+ G   A  + +A+ + KEM      P+V+ YN LI+ 
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--- 181
           F E+G   +A ++ D +   G+   + T+N +IK YCK G+ D A ++++ M   GF   
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434

Query: 182 --------------------------------SPDCVTYNTLIDANCKAGNMEEAFRMMD 209
                                           SP      TLI   CK G   +A  +  
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
               KG  ++T T N +LH LC   KLDEA+ +      RG  +D VSY TLI+G    +
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K + A    DEM +R + P  +TY+ +I GL    K E+AI   ++  ++GM+PD  T++
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +I G C   + E+  +F ++M+ K+ +P+ V  N L+   CR G L  AL+       K
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES-GRLEE 448
           G + +S TY +LI  +    R+E+A  L  EM  + L P+ + Y    TAL++  G+L +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY----TALIDGYGKLGQ 730

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
             K   ++ E    N              + P+ I+Y+  I  +   G   +A ++  E 
Sbjct: 731 MVKVECLLREMHSKN--------------VHPNKITYTVMIGGYARDGNVTEASRLLNEM 776

Query: 509 RQKGIAINKSTYMNLMNGLIKR 530
           R+KGI  +  TY   + G +K+
Sbjct: 777 REKGIVPDSITYKEFIYGYLKQ 798



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 259/527 (49%), Gaps = 28/527 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T N +L +L +  +  +  +   D+  +G+ P+   +   ++ +CK G ++EA
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++   M +    P+V T+N +I+G    G  +EAF  +++M    + P ++TY+ L+  
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + R  +A+ ++ E+ + G  PN + +N +I  + + G ++KA +I   M   G S  
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY---- 240
             TYNTLI   CK G  + A R++  M   G  +N  +  +++  LC     D A     
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459

Query: 241 -MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL + S  G  L      TLI+G  +  K ++AL+LW +   +  +  T T NA++ G
Sbjct: 460 EMLLRNMSPGGGLLT-----TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++GK ++A  +  E+L  G + D  ++NT+I G C + ++++A  F ++MV++  KPD
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T +IL+ GL     +E+A++F+      G   D  TY+ +I   CK  R E+      
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  K + P+   Y  +  A   SGRL  A +    M   G                 I 
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-----------------IS 677

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           P+S +Y+  I       R ++A  +FEE R +G+  N   Y  L++G
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 213/447 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN ++D+  + G LN+  ++   M  +GL    +TYN L+ GYCK G    A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++  M       +  ++  +I   C+  M + A R   EM    + P      TLI+ 
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +A +L  +    G   +  T N ++   C+ GK+D+A +I + +   G   D
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTLI   C    ++EAF  +D M ++GLK +  T + ++  L    K++EA    +
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D  +Y  +I G  + E+     + +DEM  + + P+T  YN +I    +SG
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A+++  ++   G+ P+  T+ ++I G     +VE+A     +M  +  +P++    
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  + G + K     R    K    + +TY  +I    ++  + +A  LL+EM EK
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQK 451
            + PD  TY       ++ G + EA K
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 216/426 (50%), Gaps = 24/426 (5%)

Query: 111 LLPDVVTYNTLIN---RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           + P   T N L+    R  E  +  EAF ++ +    G+ P+       I  +CK GK++
Sbjct: 222 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVE 277

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A K+   MEE G +P+ VT+NT+ID     G  +EAF   + M  +G++   IT + ++
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L   K++ +AY +L   +K+G+  + + Y  LI  +      N+A+++ D M  + + 
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            ++ TYN +I G  ++G+ + A  +L E+L  G   ++ +F ++I   CS    + AL+F
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M+ ++  P       L+SGLC+ G   KAL+ +  ++ KG  VD+ T N L+  LC+
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +L++AF +  E+  +    DR +Y  + +      +L+EA  F   MV+ G       
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG------- 570

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     + P + +YS  I    +  + ++A+Q +++ ++ G+  +  TY  +++G 
Sbjct: 571 ----------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620

Query: 528 IKRRKS 533
            K  ++
Sbjct: 621 CKAERT 626



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 187/405 (46%), Gaps = 45/405 (11%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
            + +M  + + P       L+SG CK G   +A+ +         + D  T N L++G C
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
            AG L+EAFR++KE+     + D V+YNTLI+      +  EAF  +DE+ + G+KP+  
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T++I+I       K+++A +   + + NG  PD  TY+ +ID  CKA   EE     D M
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             K ++ NT+                                    Y  LI  Y R  + 
Sbjct: 637 MSKNVQPNTVV-----------------------------------YNHLIRAYCRSGRL 661

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + AL+L ++MK + I P++ TY ++I G+S   + E+A  +  E+   G+ P+   +  +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G+   GQ+ K      +M  K+  P+ +T  +++ G  R+G + +A +       KG 
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             DS+TY   I    K+  + +AF           G D   YAAI
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAI 816



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 141/278 (50%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+ D V+YNT++     K KL+E    L +M K+GL P+  TY+IL+ G   +  ++
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA++  D   +N  LPDV+TY+++I+G C A   EE      EM S  + P+ V YN LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             +  SGR   A +L +++   GI PN+ T+  +IK      ++++A  +   M   G  
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+   Y  LID   K G M +   ++  M  K +  N IT   ++     +  + EA  L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           LN   ++G   D ++Y   I GY +      A K  DE
Sbjct: 773 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/554 (30%), Positives = 265/554 (47%), Gaps = 44/554 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G    PD  T+N +L AL +KG + E   LL+ + K+G+  N+ T NI + G C+ G 
Sbjct: 202 MLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261

Query: 61  LKEAMRVV---------DLMTQNK-------------------------SLPDVWTYNML 86
           L+EA+ +V         D++T N                           +PD +TYN +
Sbjct: 262 LEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           I+G+C +GML+EA  L K+      +PD VTY +LIN     G    A +L +E     +
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           KP+ V +N ++K  C++G I  A +++  M E G  PD  TYN +I+  CK GN+ +A  
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +M+    KG   +  T NT++   C   KLD A  L+      G   D ++Y +++ G  
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  KA    + ++EM  +   P+  TYN +I    +  + E+A  ++  + Q G++PD  
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAV 561

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           +FNT+IHGFC  G ++ A     K+ EK +     T NIL+     +  ++ A K F   
Sbjct: 562 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 621

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           I KG   D  TY  L+  LCK   ++ A+  L+EM  K   P   T+  +   L  + R+
Sbjct: 622 ISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRV 681

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE-HCSQGRYKDALQIF 505
            EA     IMV  G +  +VV    S   +EI    I   E + + H S   Y       
Sbjct: 682 SEAVAIIHIMVRMGVVP-EVVDTILSTDKKEIAAPKILVEELMKKGHISYRAY------- 733

Query: 506 EETRQKGIAINKST 519
            E   +G+  NK T
Sbjct: 734 -EVLHEGVRDNKLT 746



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 253/526 (48%), Gaps = 19/526 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F C P    YN I+DAL      ++   +   M   G+ P+  T+ + +  +C  G 
Sbjct: 97  MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R++  +++         Y  ++ G    G    A  L  EM    + PDV T+N 
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G  ME+  L+ ++ + G+  N  T NI I+  C++G++++A  +V  M    
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY- 275

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTYNTL+   CK   ++EA + +  M  +G   +  T NTI+   C    L EA 
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL  A  +G+  D V+Y +LI G   +    RAL+L++E + + + P    YN+++ GL
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G    A+ ++NE+++ G  PD  T+N II+G C  G +  A    N  + K + PD+
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N L+ G C+   L+ AL+        G A D +TYN++++ LCK  + ++      E
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K   P+  TY  +     +  +LEEA      M + G +                 P
Sbjct: 516 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV-----------------P 558

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            ++S++  I+  C  G    A  +F++  +KG +    T+ N++ G
Sbjct: 559 DAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTF-NILIG 603



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 246/522 (47%), Gaps = 25/522 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPN--RTTYNILVSGYCKLGWLKEAMRVVD 69
            Y  ++  L   G+L++V   L+  +   L P+  +  Y   +  Y + G L+ A+   +
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M      P    YN +++   NA   ++A ++   M +  + PD  T+   +  F  +G
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R   A +L+  L E G       +  +++     G    A  +   M      PD  T+N
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            ++ A C+ G++ E+  ++  + ++G+  N  T N  +  LC + +L+EA  L+    + 
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV---ERM 272

Query: 250 GYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           G Y+  D V+Y TL+ G  +D K   A +    M  +  +P  FTYN +I G  +SG  +
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A ++L + +  G +PD  T+ ++I+G C+EG +E+AL+  N+   K  KPD+V  N L+
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCR+G++  AL+     + +G   D  TYN +I+ LCK   + DA  ++++   K   
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL 452

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD +T+  +     +  +L+ A +    M   G                 I P  I+Y+ 
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG-----------------IAPDVITYNS 495

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +N  C  G+ K+  + FEE   KG   N  TY  L+    K
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCK 537



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 212/451 (47%), Gaps = 18/451 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y   I  +  AG L  A    + M+     P    YN +++    +    +A K+   + 
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
             G+ P+A TH + +K +C  G+   A +++R++ E G       Y T++      G+  
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  + D M  + +  +  T N +LH LC +  + E+  LL    KRG   ++ +    I
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G   D +   A+ L + M    + P   TYN ++ GL +  K ++A   L  ++  G I
Sbjct: 254 RGLCEDGRLEEAVALVERMGA-YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD+ T+NTII G+C  G +++A +     V K F PD VT   L++GLC EG +E+AL+ 
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F     K    D V YN+L+  LC++  +  A  +++EM E+   PD +TY  I   L +
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G + +A    +  +  G +                 P   +++  I+ +C + +   AL
Sbjct: 433 MGNISDAAVVMNDAIVKGYL-----------------PDVFTFNTLIDGYCKRLKLDSAL 475

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           Q+ E     GIA +  TY +++NGL K  K+
Sbjct: 476 QLVERMWTYGIAPDVITYNSVLNGLCKAGKA 506



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 188/417 (45%), Gaps = 21/417 (5%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT--HNIMIKWYCKEGKIDKACKI 172
           +  Y  LI     +GR  +    +     H + P+++   +   I+ Y + G++  A   
Sbjct: 35  IPAYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              M+     P    YN ++DA   A   ++A ++   M   G+  +  T    L + C 
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +   A  LL S S+RG      +Y T++ G +       A  L+DEM  R + P   T
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           +N ++  L Q G   ++  +L ++L+ GM  ++ T N  I G C +G++E+A+    +M 
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM- 272

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                PD+VT N L+ GLC++  +++A ++    + +G   D  TYNT+I   CK   L+
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  LL +   K   PDR TY ++   L   G +E A +  +                  
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFN-----------------E 375

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +++ P  + Y+  +   C QG    ALQ+  E  ++G   +  TY  ++NGL K
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 6/276 (2%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  PD +TYN++L+ L K GK  EV +   +M  +G  PN  TYNIL+  +CK+  L+E
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  V+  M Q+  +PD  ++N LI+G+C  G L+ A+ L ++++         T+N LI 
Sbjct: 544 ASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 603

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +        A K+  E+   G KP+  T+ I++   CK   +D+A   +  M   GF P
Sbjct: 604 AYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVP 663

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              T+  +++       + EA  ++ +M R G+    +  +TIL T   +K++    +L+
Sbjct: 664 SMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTD--KKEIAAPKILV 719

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
               K+G ++   +Y  L  G  RD K  R  +  D
Sbjct: 720 EELMKKG-HISYRAYEVLHEG-VRDNKLTRKARKAD 753


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 239/461 (51%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F   P   + N +L    K GK ++V+    DM   G  P   TYNI++   CK G 
Sbjct: 86  MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 145

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  + + M     +PD  TYN +I+G+   G L++     +EM+ +   PDV+TYN 
Sbjct: 146 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 205

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F + G+     +   E+  +G+KPN V+++ ++  +CKEG + +A K   +M   G
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 265

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY +LIDANCK GN+ +AFR+ + M + G++ N +T   ++  LC  +++ EA 
Sbjct: 266 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 325

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   +  SY  LI G+ + +  +RAL+L +E+K R I P    Y   IWGL
Sbjct: 326 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 385

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K E A  ++NE+ + G+  +   + T++  +   G   + L   ++M E   +  +
Sbjct: 386 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 445

Query: 361 VTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           VT  +L+ GLC+  ++ KA+ +F R     G   ++  +  +I  LCK+ ++E A  L  
Sbjct: 446 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 505

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M +K L PDR  Y ++     + G + EA      M E G
Sbjct: 506 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 546



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 231/455 (50%), Gaps = 1/455 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTYN+++D   K G+L++      +MK     P+  TYN L++ +CK G L   
Sbjct: 160 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 219

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M  N   P+V +Y+ L++ +C  GM+++A +   +M  + L+P+  TY +LI+ 
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 279

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +AF+L +E+ + G++ N VT+  +I   C   ++ +A ++   M+  G  P+
Sbjct: 280 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 339

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +YN LI    KA NM+ A  +++ +  +G+K + +   T +  LC  +K++ A +++N
Sbjct: 340 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 399

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + + Y TL+  YF+       L L DEMKE  I  +  T+  +I GL ++ 
Sbjct: 400 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 459

Query: 305 KTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              +A+D  N +    G+  +   F  +I G C + QVE A     +MV+K   PD    
Sbjct: 460 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 519

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ G  ++G + +AL         G  +D + Y +L+  L    +L+ A   L EM  
Sbjct: 520 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 579

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           + + PD     ++     E G ++EA +  S +++
Sbjct: 580 EGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 614



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 223/478 (46%), Gaps = 19/478 (3%)

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T+N  +P    ++ L +   + GMLEEA +   +M+  ++ P   + N L++RF + G++
Sbjct: 52  TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 111

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +  +   ++   G +P   T+NIMI   CKEG ++ A  +   M+  G  PD VTYN++
Sbjct: 112 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 171

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID   K G +++     + M     + + IT N +++  C   KL             G 
Sbjct: 172 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 231

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + VSY TL+  + ++    +A+K + +M+   ++P+ +TY ++I    + G    A  
Sbjct: 232 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 291

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + NE+LQ G+  +  T+  +I G C   ++++A +   KM      P++ + N L+ G  
Sbjct: 292 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 351

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +   +++AL+       +G   D + Y T I  LC   ++E A  +++EM+E  +  +  
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVE--------------TGKINHQVVQP-----NTS 472
            Y  +  A  +SG   E       M E               G   +++V       N  
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                +  ++  ++  I+  C   + + A  +FE+  QKG+  +++ Y +LM+G  K+
Sbjct: 472 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 36/389 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G  P+ V+Y+T++DA  K+G + +      DM++ GLVPN  TY  L+   CK+G 
Sbjct: 226 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 285

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A R+ + M Q     +V TY  LI+G C+A  ++EA  L  +M++  ++P++ +YN 
Sbjct: 286 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 345

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++     A +L++EL   GIKP+ + +   I   C   KI+ A  ++  M+E G
Sbjct: 346 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK-------------------------- 214
              + + Y TL+DA  K+GN  E   ++D M                             
Sbjct: 406 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 465

Query: 215 ----------GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
                     GL+ N      ++  LC + +++ A  L     ++G   D  +Y +L+ G
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            F+      AL L D+M E  +      Y +++WGLS   + ++A   L E++  G+ PD
Sbjct: 526 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           E    +++      G +++A++  + +++
Sbjct: 586 EVLCISVLKKHYELGCIDEAVELQSYLMK 614



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 165/359 (45%), Gaps = 21/359 (5%)

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           RN+   GF      ++ LID     G +EEA +    M R  +   T + N +LH     
Sbjct: 53  RNVCVPGFGVFDALFSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 108

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K D+           G      +Y  +I    ++     A  L++EMK R ++P T TY
Sbjct: 109 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 168

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N+MI G  + G+ +  +    E+      PD  T+N +I+ FC  G++   L+F+ +M  
Sbjct: 169 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 228

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              KP++V+ + L+   C+EG++++A+KF+      G   +  TY +LI + CK   L D
Sbjct: 229 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 288

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           AF L +EM +  +  +  TY A+   L ++ R++EA++        GK++   V PN + 
Sbjct: 289 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF------GKMDTAGVIPNLA- 341

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                     SY+  I+          AL++  E + +GI  +   Y   + GL    K
Sbjct: 342 ----------SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 390



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 138/270 (51%), Gaps = 18/270 (6%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K +   + + +M      P+ FTYN MI  + + G  E A  +  E+   G++PD  T+N
Sbjct: 110 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 169

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++I GF   G+++  + F  +M +   +PD++T N L++  C+ G L   L+F+R     
Sbjct: 170 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 229

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + V+Y+TL+ + CKE  ++ A     +M    L P+ YTY ++  A  + G L +A
Sbjct: 230 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 289

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            +  + M++ G                 ++ + ++Y+  I+  C   R K+A ++F +  
Sbjct: 290 FRLGNEMLQVG-----------------VEWNVVTYTALIDGLCDAERMKEAEELFGKMD 332

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
             G+  N ++Y  L++G +K  K++ +A++
Sbjct: 333 TAGVIPNLASYNALIHGFVK-AKNMDRALE 361



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 36/315 (11%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY  ++D L    ++ E  +L   M   G++PN  +YN L+ G+ K   +  A+ +++ 
Sbjct: 306 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 365

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           +      PD+  Y   I G C+   +E A  +  EM+   +  + + Y TL++ +F+SG 
Sbjct: 366 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 425

Query: 131 SMEAFKLIDELDE------------------------------------HGIKPNAVTHN 154
             E   L+DE+ E                                     G++ NA    
Sbjct: 426 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 485

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            MI   CK+ +++ A  +   M + G  PD   Y +L+D N K GN+ EA  + D M   
Sbjct: 486 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 545

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+K++ +   +++  L    +L +A   L      G + DEV   +++  ++     + A
Sbjct: 546 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 605

Query: 275 LKLWDEMKERQIMPS 289
           ++L   + + Q++ S
Sbjct: 606 VELQSYLMKHQLLTS 620


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/425 (33%), Positives = 232/425 (54%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           MK++G+VP   T N ++S + KL  ++ A  +   M + +    V+T+N+++N  C  G 
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      ME L   P+VV+YNT+I+ +   G    A +++D +   GI+P++ T+  
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   CKEG++++A  +   M E G  P+ VTYNTLID  C  G++E AF   D M +KG
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  +  T N ++H L  E ++ EA  ++    K+G   D ++Y  LI GY R   A +A 
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L +EM  + I P+  TY ++I+ LS+  + ++A D+  ++L  G+ PD   FN ++ G 
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C+ G VE+A     +M  KS  PD VT N L+ G CREG +E+A         +G   D 
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 542

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           ++YNTLIS   +   ++DAF +  EM      P   TY A+   L ++   + A++    
Sbjct: 543 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 602

Query: 456 MVETG 460
           MV  G
Sbjct: 603 MVNKG 607



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/369 (34%), Positives = 198/369 (53%), Gaps = 35/369 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  P+ V+YNTI+     +G +   R +L  M+ +G+ P+  TY  L+SG CK G 
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  + D M +   +P+  TYN LI+G+CN G LE AF  R EM    ++P V TYN 
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---- 176
           L++  F  GR  EA  +I E+ + GI P+A+T+NI+I  Y + G   KA  +   M    
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432

Query: 177 -------------------------------EENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                                           + G SPD + +N ++D +C  GN+E AF
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M RK +  + +T NT++   C E K++EA MLL+   +RG   D +SY TLI+GY
Sbjct: 493 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 552

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R      A ++ DEM      P+  TYNA+I  L ++ + + A ++L E++  G+ PD+
Sbjct: 553 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 612

Query: 326 TTFNTIIHG 334
           +T+ ++I G
Sbjct: 613 STYLSLIEG 621



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 216/394 (54%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +++ L K+GKL + R+ +  M+  G  PN  +YN ++ GY   G ++ A R++D M
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PD +TY  LI+G C  G LEEA  L  +M  + L+P+ VTYNTLI+ +   G  
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             AF   DE+ + GI P+  T+N+++     EG++ +A  +++ M + G  PD +TYN L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+   + GN ++AF + + M  KG++   +T  ++++ L    ++ EA  L      +G 
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D + +  ++ G+  +    RA  L  EM  + + P   T+N ++ G  + GK E+A  
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+E+ + G+ PD  ++NT+I G+   G ++ A +  ++M+   F P ++T N L+  LC
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +    + A +  +  + KG + D  TY +LI  +
Sbjct: 589 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 228/457 (49%), Gaps = 17/457 (3%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           S+     +++L+   C     +EAF+    M+   ++P + T N +++ F +  R   A+
Sbjct: 153 SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 212

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L  E+    I     T NIM+   CKEGK+ KA + +  ME  GF P+ V+YNT+I   
Sbjct: 213 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 272

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
              GN+E A R++D M  KG++ ++ T  +++  +C E +L+EA  L +   + G   + 
Sbjct: 273 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 332

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y TLI GY       RA    DEM ++ IMPS  TYN ++  L   G+  +A DM+ E
Sbjct: 333 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 392

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + + G+IPD  T+N +I+G+   G  +KA   HN+M+ K  +P  VT   L+  L R   
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +++A   F   + +G + D + +N ++   C    +E AF LL EM+ K + PD  T+  
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +       G++EEA+     M   G                 I P  ISY+  I+ +  +
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRG-----------------IKPDHISYNTLISGYGRR 555

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           G  KDA ++ +E    G      TY  L+  L K ++
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 250/500 (50%), Gaps = 17/500 (3%)

Query: 28  EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
           E+ D L+  + +  V +   +++LV   C+L    EA +   +M +   +P + T N ++
Sbjct: 140 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 199

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           + +     +E A+ L  EM  L++   V T+N ++N   + G+  +A + I  ++  G K
Sbjct: 200 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 259

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           PN V++N +I  Y   G I+ A +I+  M   G  PD  TY +LI   CK G +EEA  +
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D M   GL  N +T NT++   C +  L+ A+   +   K+G      +Y  L+   F 
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + +   A  +  EM+++ I+P   TYN +I G S+ G  ++A D+ NE+L  G+ P   T
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           + ++I+      ++++A     K++++   PD++  N ++ G C  G +E+A    +   
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 499

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            K    D VT+NTL+   C+E ++E+A  LL EM+ + + PD  +Y  + +     G ++
Sbjct: 500 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 559

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A +    M+  G                  +P+ ++Y+  I   C       A ++ +E
Sbjct: 560 DAFRVRDEMLSIG-----------------FNPTLLTYNALIKCLCKNQEGDLAEELLKE 602

Query: 508 TRQKGIAINKSTYMNLMNGL 527
              KGI+ + STY++L+ G+
Sbjct: 603 MVNKGISPDDSTYLSLIEGM 622


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 244/447 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC+PD V+Y TI+D     G+L +V  L+ +M+ +GL PN  TY+ ++   CK G 
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E  +V+  M +    PD   Y  LI+G+C  G  + A++L  EME+ +++PD + ++ 
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA 255

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI     SG+ +EA KL +E+ + G +P+ VT+  +I  YCK G++ KA  +   M + G
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY  L D  CK+G ++ A  ++  M RKGL++N  T NTI++ LC    + +A 
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAV 375

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+    + G + D ++Y TL+  Y++  +  +A +L  EM +R + P+  T+N ++ GL
Sbjct: 376 KLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGL 435

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SGK E    +L  +L+ G++P+  T+N+I+  +C    +  + + +  M  +   PD 
Sbjct: 436 CMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDS 495

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NIL+ G C+   +++A    +  + K   + + +YN LI    K ++L +A  L  E
Sbjct: 496 NTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEE 555

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLE 447
           M  + L      Y        E G +E
Sbjct: 556 MRREGLVASAEIYNLFVDMNYEEGNME 582



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 243/451 (53%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN ++++LF+ GK+ E   LL  M+ +G +P+  +Y  ++ GYC +G L++ +++V  M
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P+++TY+ +I   C +G + E  ++ +EM    + PD V Y TLI+ F + G +
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A+KL  E++   I P+++  + +I      GK+ +A K+   M + GF PD VTY  L
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CK G M++AF + + M + GL  N +T   +   LC   +LD A  LL+   ++G 
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
            L+  +Y T++ G  +     +A+KL +EMKE  + P T TY  ++    ++G+  +A +
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L E+L  G+ P   TFN +++G C  G++E   +    M+EK   P+  T N ++   C
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
               +  + + +R    +G   DS TYN LI   CK R +++A+ L  EM EK+      
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTAS 531

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           +Y A+     +  +L EA++    M   G +
Sbjct: 532 SYNALIKGFFKRKKLLEARQLFEEMRREGLV 562



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 232/448 (51%), Gaps = 20/448 (4%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM--EAFK 136
           D   +++       AG+L EA +   ++ +  +     + N  +     S R M     K
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT-CLSSKRDMLGMVLK 96

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           +  E  + G+  N  ++NI++    + GKI +A  ++  ME  G  PD V+Y T+ID  C
Sbjct: 97  VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYC 156

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
             G +++  +++  M  KGLK N  T ++I+  LC   K+ E   +L    KRG + D V
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            Y TLI G+ +      A KL+ EM+ R+I+P +  ++A+I GLS SGK  +A  + NE+
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           ++ G  PDE T+  +I G+C  G+++KA   HN+MV+    P++VT   L  GLC+ G L
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A +       KG  ++  TYNT+++ LCK   +  A  L+ EM+E  L PD  TY  +
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
             A  ++G + +A++    M++ G                 + P+ ++++  +N  C  G
Sbjct: 397 MDAYYKTGEMVKARELLREMLDRG-----------------LQPTVVTFNVLMNGLCMSG 439

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLM 524
           + +D  ++ +   +KGI  N +TY ++M
Sbjct: 440 KLEDGERLLKWMLEKGIMPNAATYNSIM 467



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 255/548 (46%), Gaps = 53/548 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC-KLGWLKEAMRV 67
           D   ++     L + G LNE R     +   G+  +  + N+ ++    K   L   ++V
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
                Q     +  +YN+L+N     G + EA  L   ME    +PDVV+Y T+I+ +  
Sbjct: 98  FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +  +L+ E+   G+KPN  T++ +I   CK GK+ +  K++R M + G  PD V 
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLID  CK GN + A+++   M  + +  ++I  + ++  L    K+ EA  L N   
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K+G+  DEV+Y  LI GY +  +  +A  L ++M +  + P+  TY A+  GL +SG+ +
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD-------- 359
            A ++L+E+ + G+  + +T+NTI++G C  G + +A++   +M E    PD        
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 360 ---------------------------IVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
                                      +VT N+L++GLC  G LE   +  +  + KG  
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            ++ TYN+++   C    +  +  +   M  + + PD  TY  +     ++  ++EA   
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              MVE                 +  + ++ SY+  I     + +  +A Q+FEE R++G
Sbjct: 518 HKEMVE-----------------KRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560

Query: 513 IAINKSTY 520
           +  +   Y
Sbjct: 561 LVASAEIY 568



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 187/354 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME    +PD++ ++ ++  L   GK+ E   L ++M K+G  P+  TY  L+ GYCKLG 
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A  + + M Q    P+V TY  L +G C +G L+ A  L  EM    L  ++ TYNT
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++G  ++A KL++E+ E G+ P+ +T+  ++  Y K G++ KA +++R M + G
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VT+N L++  C +G +E+  R++  M  KG+  N  T N+I+   C    +  + 
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +G   D  +Y  LI G+ +      A  L  EM E++   +  +YNA+I G 
Sbjct: 481 EIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGF 540

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +  K  +A  +  E+ + G++     +N  +     EG +E  L+  ++ +EK
Sbjct: 541 FKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 171/315 (54%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++D   K G++ +   L + M + GL PN  TY  L  G CK G L  A  +
Sbjct: 283 PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANEL 342

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +     ++ TYN ++NG C AG + +A +L +EM+   L PD +TY TL++ +++
Sbjct: 343 LHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYK 402

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G  ++A +L+ E+ + G++P  VT N+++   C  GK++   ++++ M E G  P+  T
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+++   C   NM  +  +   M  +G+  ++ T N ++   C  + + EA+ L     
Sbjct: 463 YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMV 522

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++ + L   SY  LI G+F+ +K   A +L++EM+   ++ S   YN  +    + G  E
Sbjct: 523 EKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNME 582

Query: 308 QAIDMLNELLQSGMI 322
             +++ +E ++  ++
Sbjct: 583 TTLELCDEAIEKCLL 597



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 137/274 (50%), Gaps = 18/274 (6%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            LK++ E  +  +  +T +YN ++  L + GK  +A  +L  +   G IPD  ++ TII 
Sbjct: 94  VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G+C  G+++K +Q   +M  K  KP++ T + ++  LC+ G + +  K  R  + +G   
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP 213

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V Y TLI   CK    + A+ L SEME +++ PD   ++A+   L  SG++ EA K  
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 454 SIMVETG----KINHQVVQPNTSKTPE--------------EIDPSSISYSEKINEHCSQ 495
           + M++ G    ++ +  +     K  E               + P+ ++Y+   +  C  
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           G    A ++  E  +KG+ +N STY  ++NGL K
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 24/185 (12%)

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           K +  D    ++    L   G+L +A KFF   +  G A+ + + N  ++ L  +R   D
Sbjct: 33  KDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKR---D 89

Query: 414 AFGLL----SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
             G++    SE  +  +  +  +Y  +  +L   G++ EA      M   G I       
Sbjct: 90  MLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI------- 142

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     P  +SY+  I+ +C  G  +  +Q+ +E + KG+  N  TY +++  L K
Sbjct: 143 ----------PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCK 192

Query: 530 RRKSI 534
             K +
Sbjct: 193 SGKVV 197


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 264/507 (52%), Gaps = 18/507 (3%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           FK+       D+   +  +G+ P++TT NIL++   +    ++     D++ +  S PDV
Sbjct: 215 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDV 273

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           + +   IN +C  G +EEA +L  +ME   + P+VVT+NT+I+     GR  EAF   ++
Sbjct: 274 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 333

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E G++P  +T++I++K   +  +I  A  +++ M + GF P+ + YN LID+  +AG+
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + +A  + D+M  KGL + + T NT++   C   + D A  LL      G+ +++ S+ +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I         + AL+   EM  R + P       +I GL + GK  +A+++  + L  G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            + D  T N ++HG C  G++++A +   +++ +    D V+ N L+SG C +  L++A 
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
            F    + +G   D+ TY+ LI  L    ++E+A     + +   + PD YTY+ +    
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++ R EE Q+F   M+         VQPNT           + Y+  I  +C  GR   
Sbjct: 634 CKAERTEEGQEFFDEMMSKN------VQPNT-----------VVYNHLIRAYCRSGRLSM 676

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           AL++ E+ + KGI+ N +TY +L+ G+
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGM 703



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 268/562 (47%), Gaps = 54/562 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   + T ++A  K GK+ E   L S M++ G+ PN  T+N ++ G    G   EA
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + M +    P + TY++L+ G   A  + +A+ + KEM      P+V+ YN LI+ 
Sbjct: 328 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 387

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--- 181
           F E+G   +A ++ D +   G+   + T+N +IK YCK G+ D A ++++ M   GF   
Sbjct: 388 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 447

Query: 182 --------------------------------SPDCVTYNTLIDANCKAGNMEEAFRMMD 209
                                           SP      TLI   CK G   +A  +  
Sbjct: 448 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 507

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
               KG  ++T T N +LH LC   KLDEA+ +      RG  +D VSY TLI+G    +
Sbjct: 508 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 567

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K + A    DEM +R + P  +TY+ +I GL    K E+AI   ++  ++GM+PD  T++
Sbjct: 568 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +I G C   + E+  +F ++M+ K+ +P+ V  N L+   CR G L  AL+       K
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES-GRLEE 448
           G + +S TY +LI  +    R+E+A  L  EM  + L P+ + Y    TAL++  G+L +
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY----TALIDGYGKLGQ 743

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
             K   ++ E    N              + P+ I+Y+  I  +   G   +A ++  E 
Sbjct: 744 MVKVECLLREMHSKN--------------VHPNKITYTVMIGGYARDGNVTEASRLLNEM 789

Query: 509 RQKGIAINKSTYMNLMNGLIKR 530
           R+KGI  +  TY   + G +K+
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQ 811



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 259/527 (49%), Gaps = 28/527 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T N +L +L +  +  +  +   D+  +G+ P+   +   ++ +CK G ++EA
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 292

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++   M +    P+V T+N +I+G    G  +EAF  +++M    + P ++TY+ L+  
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + R  +A+ ++ E+ + G  PN + +N +I  + + G ++KA +I   M   G S  
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY---- 240
             TYNTLI   CK G  + A R++  M   G  +N  +  +++  LC     D A     
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472

Query: 241 -MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL + S  G  L      TLI+G  +  K ++AL+LW +   +  +  T T NA++ G
Sbjct: 473 EMLLRNMSPGGGLLT-----TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 527

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++GK ++A  +  E+L  G + D  ++NT+I G C + ++++A  F ++MV++  KPD
Sbjct: 528 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 587

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T +IL+ GL     +E+A++F+      G   D  TY+ +I   CK  R E+      
Sbjct: 588 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 647

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  K + P+   Y  +  A   SGRL  A +    M   G                 I 
Sbjct: 648 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-----------------IS 690

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           P+S +Y+  I       R ++A  +FEE R +G+  N   Y  L++G
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 737



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 213/447 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN ++D+  + G LN+  ++   M  +GL    +TYN L+ GYCK G    A
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 432

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++  M       +  ++  +I   C+  M + A R   EM    + P      TLI+ 
Sbjct: 433 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 492

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +A +L  +    G   +  T N ++   C+ GK+D+A +I + +   G   D
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTLI   C    ++EAF  +D M ++GLK +  T + ++  L    K++EA    +
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D  +Y  +I G  + E+     + +DEM  + + P+T  YN +I    +SG
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A+++  ++   G+ P+  T+ ++I G     +VE+A     +M  +  +P++    
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  + G + K     R    K    + +TY  +I    ++  + +A  LL+EM EK
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQK 451
            + PD  TY       ++ G + EA K
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 216/426 (50%), Gaps = 24/426 (5%)

Query: 111 LLPDVVTYNTLIN---RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           + P   T N L+    R  E  +  EAF ++ +    G+ P+       I  +CK GK++
Sbjct: 235 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVE 290

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A K+   MEE G +P+ VT+NT+ID     G  +EAF   + M  +G++   IT + ++
Sbjct: 291 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 350

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L   K++ +AY +L   +K+G+  + + Y  LI  +      N+A+++ D M  + + 
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            ++ TYN +I G  ++G+ + A  +L E+L  G   ++ +F ++I   CS    + AL+F
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M+ ++  P       L+SGLC+ G   KAL+ +  ++ KG  VD+ T N L+  LC+
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +L++AF +  E+  +    DR +Y  + +      +L+EA  F   MV+ G       
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG------- 583

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     + P + +YS  I    +  + ++A+Q +++ ++ G+  +  TY  +++G 
Sbjct: 584 ----------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633

Query: 528 IKRRKS 533
            K  ++
Sbjct: 634 CKAERT 639



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 187/405 (46%), Gaps = 45/405 (11%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
            + +M  + + P       L+SG CK G   +A+ +         + D  T N L++G C
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
            AG L+EAFR++KE+     + D V+YNTLI+      +  EAF  +DE+ + G+KP+  
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T++I+I       K+++A +   + + NG  PD  TY+ +ID  CKA   EE     D M
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             K ++ NT+                                    Y  LI  Y R  + 
Sbjct: 650 MSKNVQPNTVV-----------------------------------YNHLIRAYCRSGRL 674

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + AL+L ++MK + I P++ TY ++I G+S   + E+A  +  E+   G+ P+   +  +
Sbjct: 675 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G+   GQ+ K      +M  K+  P+ +T  +++ G  R+G + +A +       KG 
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             DS+TY   I    K+  + +AF           G D   YAAI
Sbjct: 795 VPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAI 829



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 141/278 (50%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+ D V+YNT++     K KL+E    L +M K+GL P+  TY+IL+ G   +  ++
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA++  D   +N  LPDV+TY+++I+G C A   EE      EM S  + P+ V YN LI
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             +  SGR   A +L +++   GI PN+ T+  +IK      ++++A  +   M   G  
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 725

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+   Y  LID   K G M +   ++  M  K +  N IT   ++     +  + EA  L
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 785

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           LN   ++G   D ++Y   I GY +      A K  DE
Sbjct: 786 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 269/552 (48%), Gaps = 50/552 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           VTY  ++    K+ K++E   +L  M+++  LVP+   Y +L+ GYC+ G + +A+R++D
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M +     +++  N LING+C  G + EA  +   M    L PD  +YNTL++ +   G
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREG 416

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
            + EAF L D++ + GI+P  +T+N ++K  C+ G  D A +I   M + G +PD V Y+
Sbjct: 417 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYS 476

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TL+D   K  N E A  +   +  +G   + IT NT++  LC   K+ EA  + +     
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D ++Y TLI GY +     +A K+   M+   I PS   YN++I GL +S +  + 
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEX 596

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            D+L E+   G+ P+  T+  +I G+C EG ++KA   + +M E     +I+ C+ ++SG
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 370 LCREGILEKALKFFRSWILKG-------------------KAVDS-------------VT 397
           L R G +++A    +  +  G                   K  DS             + 
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 716

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN  I+ LCK  +++DA    S +  K   PD +TY  +      +G ++EA +    M+
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
             G +                 P+ ++Y+  IN  C       A ++F +  QKG+  N 
Sbjct: 777 RRGLV-----------------PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 518 STYMNLMNGLIK 529
            TY  L++G  K
Sbjct: 820 VTYNTLIDGYCK 831



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 220/430 (51%), Gaps = 32/430 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y+T+LD LFK         L  D+  +G   +R T+N ++SG CK+G + EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M      PD  TY  LI+G+C A  + +AF+++  ME   + P +  YN+LI+ 
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISG 586

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+S R +E   L+ E+   G+ PN VT+  +I  +CKEG +DKA      M ENG S +
Sbjct: 587 LFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKG----------------------------- 215
            +  +T++    + G ++EA  +M  M   G                             
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 706

Query: 216 ---LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              L  N I  N  +  LC   K+D+A    +  S +G+  D  +Y TLI GY      +
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L DEM  R ++P+  TYNA+I GL +S   ++A  + ++L Q G+ P+  T+NT+I
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G+C  G ++ A +  +KM+E+   P +VT + L++GLC+ G +E+++K     I  G  
Sbjct: 827 DGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVD 886

Query: 393 VDSVTYNTLI 402
              + Y TL+
Sbjct: 887 SKLIEYCTLV 896



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 259/519 (49%), Gaps = 18/519 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            ++ IL    +KG       +  +M K G +P+  + N L++   K G    A  V   M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   +PDV+  ++++N +C  G ++EA    K+ME+L + P++VTY++LIN +   G  
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNT 190
             A  ++  + E G+  N VT+ ++IK YCK+ K+D+A K++R M EE    PD   Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  C+ G +++A R++D M R GLK N    N++++  C   ++ EA  ++       
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  SY TL+ GY R+   + A  L D+M +  I P+  TYN ++ GL + G  + A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + + +++ G+ PDE  ++T++ G       E A      ++ + F    +T N ++SGL
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G + +A + F      G + D +TY TLI   CK   +  AF +   ME + + P  
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSI 577

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y ++ + L +S RL E    T ++ E G                 + P+ ++Y   I+
Sbjct: 578 EMYNSLISGLFKSRRLVEX---TDLLTEMGI--------------RGLTPNIVTYGALID 620

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             C +G    A   + E  + G++ N      +++GL +
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 659



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 165/573 (28%), Positives = 261/573 (45%), Gaps = 51/573 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P   + N++L+ L K G+ +    +   M + G+VP+    +I+V+ +CK G + EA
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
              V  M      P++ TY+ LING+ + G +E A  + K M                  
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305

Query: 107 ------------------ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                             E   L+PD   Y  LI+ +  +G+  +A +L+DE+   G+K 
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 365

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N    N +I  YCK G+I +A  ++  M +    PD  +YNTL+D  C+ G+  EAF + 
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M ++G++   +T NT+L  LC     D+A  + +   K G   DEV Y TL+ G F+ 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKM 485

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           E    A  LW ++  R    S  T+N MI GL + GK  +A ++ +++   G  PD  T+
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            T+I G+C    V +A +    M  +   P I   N L+SGL +   L +         +
Sbjct: 546 RTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGI 605

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   + VTY  LI   CKE  L+ AF    EM E  L  +    + + + L   GR++E
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 449 AQKFTSIMVETG-----------KINHQVVQPNTSKTPEE----IDPSSISYSEKINEHC 493
           A      MV+ G            I +  +Q       E     + P++I Y+  I   C
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
             G+  DA + F     KG   +  TY  L++G
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 758



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 243/488 (49%), Gaps = 38/488 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+ +YNT+LD   ++G  +E  +L   M ++G+ P   TYN L+ G C++G   +A+++
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             LM +    PD   Y+ L++G       E A  L K++ +       +T+NT+I+   +
Sbjct: 460 WHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE--------- 178
            G+ +EA ++ D++ + G  P+ +T+  +I  YCK   + +A K+   ME          
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEM 579

Query: 179 --------------------------NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                      G +P+ VTY  LID  CK G +++AF     M 
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             GL  N I  +T++  L    ++DEA +L+      G++ D   +      Y   +K  
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            +L   DE  +  ++P+   YN  I GL ++GK + A    + L   G +PD  T+ T+I
Sbjct: 700 DSL---DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 756

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG+ + G V++A +  ++M+ +   P+IVT N L++GLC+   +++A + F     KG  
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 816

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            + VTYNTLI   CK   ++ AF L  +M E+ + P   TY+A+   L + G +E + K 
Sbjct: 817 PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKL 876

Query: 453 TSIMVETG 460
            + M++ G
Sbjct: 877 LNQMIKAG 884



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 265/559 (47%), Gaps = 55/559 (9%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD   Y  ++D   + GK+++   LL +M + GL  N    N L++GYCK G + EA  
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M      PD ++YN L++G+C  G   EAF L  +M    + P V+TYNTL+    
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAV----------------------------------- 151
             G   +A ++   + + G+ P+ V                                   
Sbjct: 449 RVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T N MI   CK GK+ +A +I   M++ G SPD +TY TLID  CKA N+ +AF++   M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            R+ +  +    N+++  L   ++L E   LL     RG   + V+YG LI G+ ++   
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           ++A   + EM E  +  +    + M+ GL + G+ ++A  ++ +++  G  PD   F   
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF--- 685

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +        ++K     ++  +    P+ +  NI ++GLC+ G ++ A +FF    LKG 
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D+ TY TLI        +++AF L  EM  + L P+  TY A+   L +S  ++ AQ+
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               + + G                 + P+ ++Y+  I+ +C  G    A ++ ++  ++
Sbjct: 806 LFHKLHQKG-----------------LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848

Query: 512 GIAINKSTYMNLMNGLIKR 530
           GI+ +  TY  L+NGL K 
Sbjct: 849 GISPSVVTYSALINGLCKH 867



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 259/554 (46%), Gaps = 54/554 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDL---LSDMKKQGLVPNRTTYNILVSGYCKL------GWL 61
           V  + I+DA+ +  +LN    L       K+Q   PN       V  YCKL      G +
Sbjct: 65  VFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPN-------VKSYCKLVHILSRGRM 117

Query: 62  KEAMR-----VVDLMTQNKSLPDVW---------------TYNMLINGWCNAGMLEEAFR 101
            +  R     +VDL         +W                ++M++  +   G+ + A  
Sbjct: 118 YDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALY 177

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           +   M     +P + + N+L+N   ++G +  A  +  ++   GI P+    +IM+  +C
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K+GK+D+A   V+ ME  G  P+ VTY++LI+     G++E A  ++  M  KG+  N +
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYL-DEVSYGTLITGYFRDEKANRALKLWDE 280
           T   ++   C + K+DEA  +L    +    + DE +YG LI GY R  K + A++L DE
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M    +  + F  N++I G  + G+  +A  ++  ++   + PD  ++NT++ G+C EG 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
             +A    +KM+++  +P ++T N LL GLCR G  + AL+ +   +  G A D V Y+T
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+  L K    E A  L  ++  +     R T+  + + L + G++ EA++    M + G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                              P  I+Y   I+ +C       A ++     ++ I+ +   Y
Sbjct: 538 -----------------CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMY 580

Query: 521 MNLMNGLIKRRKSI 534
            +L++GL K R+ +
Sbjct: 581 NSLISGLFKSRRLV 594



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 188/366 (51%), Gaps = 32/366 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD +TY T++D   K   + +   +   M+++ + P+   YN L+SG  K   
Sbjct: 533 MKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRR 592

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++  M      P++ TY  LI+GWC  GML++AF    EM    L  +++  +T
Sbjct: 593 LVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 652

Query: 121 LINRFFESGRSMEAFKLIDELDEHG--------------------------------IKP 148
           +++  +  GR  EA  L+ ++ +HG                                + P
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLP 712

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N + +NI I   CK GK+D A +    +   GF PD  TY TLI     AGN++EAFR+ 
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 772

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M R+GL  N +T N +++ LC  + +D A  L +   ++G + + V+Y TLI GY + 
Sbjct: 773 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              + A KL D+M E  I PS  TY+A+I GL + G  E+++ +LN+++++G+      +
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892

Query: 329 NTIIHG 334
            T++ G
Sbjct: 893 CTLVQG 898



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 143/300 (47%), Gaps = 32/300 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY  ++D   K+G L++      +M + GL  N    + +VSG  +LG + EA
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666

Query: 65  MRVVDLMTQNKSLPDV--------------------------------WTYNMLINGWCN 92
             ++  M  +   PD                                   YN+ I G C 
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G +++A R    +     +PD  TY TLI+ +  +G   EAF+L DE+   G+ PN VT
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +I   CK   +D+A ++   + + G  P+ VTYNTLID  CK GNM+ AF++ D M 
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G+  + +T + +++ LC    ++ +  LLN   K G     + Y TL+ G F+    N
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYN 906



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 112/197 (56%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+N+ YN  +  L K GK+++ R   S +  +G VP+  TY  L+ GY   G + EA R
Sbjct: 711 LPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M +   +P++ TYN LING C +  ++ A RL  ++    L P+VVTYNTLI+ + 
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G    AFKL D++ E GI P+ VT++ +I   CK G I+++ K++  M + G     +
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890

Query: 187 TYNTLIDANCKAGNMEE 203
            Y TL+    K  N  E
Sbjct: 891 EYCTLVQGGFKTSNYNE 907


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 257/457 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G  PD  T+N +++      ++N    +++ + K G  P+  T+N L+ G C  G 
Sbjct: 94  LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA+   D +       D ++Y  LING C  G    A ++ ++++   +  +VV YNT
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +    ++A++L  ++    I P+ VT + +I  +C  G++++A  + R M    
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  T+N L+DA CK GN++ A  M+ VM ++G+  N +T ++++   C   ++++A 
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +LN+ S+ G   +  SY T+I G+ + +  + AL L+++M+ + I P   TYN++I GL
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+   A ++++E+  +G   +  T+N +I   C    V++A+    K+ ++  +PD+
Sbjct: 394 CKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDM 453

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NIL+ GLC+ G L+ A   F+  + KG +V++ TYN +++ LCKE   ++A  LLS+
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           M++  + PD  TY  +  AL      E+A+K    M+
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 162/280 (57%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N ++DAL K+G L   +++L  M K+G++PN  TY+ L+ GYC +  + +A  V
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ ++Q  + P+  +Y  +ING+C   M++EA  L  +M+   + PD VTYN+LI+   +
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCK 395

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR   A++L+DE+ ++G   N  T+N +I   CK   +D+A  +V+ +++ G  PD  T
Sbjct: 396 SGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYT 455

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N LI   CK G ++ A  +   +  KG  +N  T N +++ LC E   DEA  LL+   
Sbjct: 456 FNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMD 515

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             G   D V+Y TLI   F  ++  +A KL  EM  R ++
Sbjct: 516 DNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 198/381 (51%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  +Y T+++ L K G+      +L  +  + +  N   YN ++   CK   + +A  + 
Sbjct: 172 DQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELY 231

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M   K  PDV T++ LI G+C  G LEEAF L +EM    + PD  T+N L++   + 
Sbjct: 232 SQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKE 291

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A  ++  + + G+ PN VT++ ++  YC   +++KA  ++  + + G +P+  +Y
Sbjct: 292 GNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSY 351

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            T+I+  CK   ++EA  + + M  KG+  + +T N+++  LC   ++  A+ L++    
Sbjct: 352 CTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHD 411

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   +  +Y  LI    ++   ++A+ L  ++K++ I P  +T+N +I+GL + G+ + 
Sbjct: 412 NGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKN 471

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A D+  +LL  G   +  T+N +++G C EG  ++A    +KM +    PD VT   L+ 
Sbjct: 472 AQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQ 531

Query: 369 GLCREGILEKALKFFRSWILK 389
            L  +   EKA K  R  I +
Sbjct: 532 ALFHKDENEKAEKLLREMIAR 552



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 214/435 (49%), Gaps = 20/435 (4%)

Query: 115 VVTYNTLINRFFESGRSM--EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           ++ +N ++    +S  +    A  L   L+ HGI P+  T NI+I  YC   +++ A  +
Sbjct: 66  IIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSM 125

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  + + G+ PD +T+NTLI   C  G ++EA    D +   G  ++  +  T+++ LC 
Sbjct: 126 MAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCK 185

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +   A  +L     +   ++ V Y T+I    + +    A +L+ +M  ++I P   T
Sbjct: 186 IGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVT 245

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           ++A+I+G    G+ E+A  +  E++   + PD  TFN ++   C EG ++ A      M+
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM 305

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++   P++VT + L+ G C    + KA     +    G A ++ +Y T+I+  CK + ++
Sbjct: 306 KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVD 365

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI---------- 462
           +A  L ++M+ K + PD+ TY ++   L +SGR+  A +    M + G+           
Sbjct: 366 EALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLI 425

Query: 463 -----NHQVVQPN--TSKTPEE-IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                NH V Q      K  ++ I P   +++  I   C  GR K+A  +F++   KG +
Sbjct: 426 DALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYS 485

Query: 515 INKSTYMNLMNGLIK 529
           +N  TY  ++NGL K
Sbjct: 486 VNAWTYNIMVNGLCK 500



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 168/326 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT++ ++      G+L E   L  +M  + + P+  T+NILV   CK G LK A  +
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M +   +P+V TY+ L++G+C    + +A  +   +  +   P+  +Y T+IN F +
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                EA  L +++   GI P+ VT+N +I   CK G+I  A ++V  M +NG   +  T
Sbjct: 361 IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT 420

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LIDA CK  ++++A  ++  +  +G++ +  T N +++ LC   +L  A  +     
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +GY ++  +Y  ++ G  ++   + A  L  +M +  I+P   TY  +I  L    + E
Sbjct: 481 SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENE 540

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIH 333
           +A  +L E++   ++        ++H
Sbjct: 541 KAEKLLREMIARDVVYALEGLEMVLH 566



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 130/248 (52%), Gaps = 7/248 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  +Y T+++   K   ++E   L +DM+ +G+ P++ TYN L+ G CK G +  A
Sbjct: 343 GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYA 402

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +VD M  N    +++TYN LI+  C    +++A  L K+++   + PD+ T+N LI  
Sbjct: 403 WELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR   A  +  +L   G   NA T+NIM+   CKEG  D+A  ++  M++NG  PD
Sbjct: 463 LCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPD 522

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TLI A       E+A +++  M  + +      L  +LH L  E K  E +    
Sbjct: 523 AVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVLH-LESEAKDQEKF---- 577

Query: 245 SASKRGYY 252
              K+GYY
Sbjct: 578 --GKKGYY 583



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 17/156 (10%)

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A+   R     G   D  T+N LI+  C    +  AF +++++ +    PD  T+  +  
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L  +G+++EA  F   ++  G                       SY   IN  C  G  
Sbjct: 147 GLCLNGKVKEALHFHDHVLALG-----------------FHLDQFSYGTLINGLCKIGET 189

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           + ALQ+  +   K + IN   Y  +++ L K +  I
Sbjct: 190 RTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVI 225


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 230/411 (55%), Gaps = 3/411 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + YN ++      G+L+  R L+++M  +   P+  TYN L+ G C  G    A+ V+D 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M + + +PDV TY +L+   C     ++A +L  EM      PD+VTYN ++N   + GR
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A + +  L  +G +PN V++NI++K  C   + + A +++  M + G  P+ VT+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C+ G +E A  +++ + + G   N+++ N +LH  C +KK+D+A   L+    RG
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            Y D VSY TL+T   R  + + A++L  ++K++   P   +YN +I GL+++GKT++A+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++LNE++  G+ PD  T++TI  G C E ++E A++   K+ +   +P+ V  N ++ GL
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           C+      A+  F   I  G   +  TY  LI  L  E  +++A  LL E+
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 216/406 (53%), Gaps = 3/406 (0%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
            YN +V+GYC  G L  A R+V  M      PD +TYN LI G C  G    A  +  EM
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
              + +PDVVTY  L+    +     +A KL+DE+ + G  P+ VT+N+++   C+EG++
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           D A + ++N+   G  P+ V+YN ++   C A   E+A  +M  MG+KG   N +T N +
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +  LC +  ++ A  +L    K G   + +SY  L+  + + +K ++A+   D M  R  
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P   +YN ++  L +SG+ + A+++L++L   G  P   ++NT+I G    G+ ++AL+
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             N+MV K  +PDI+T + + +GLCRE  +E A++ F      G   ++V YN +I  LC
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 358

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           K R    A  L + M      P+  TY  +   L   G ++EA+  
Sbjct: 359 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 404



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 200/372 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT++  L  +G+      +L +M ++  VP+  TY IL+   CK    K+AM++
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD+ TYN+++NG C  G +++A    K + S    P+ V+YN ++     
Sbjct: 90  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 149

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +A +L+ E+ + G  PN VT N++I + C++G ++ A +++  + + G +P+ ++
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+ A CK   M++A   +D+M  +G   + ++ NT+L  LC   ++D A  LL+   
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G     +SY T+I G  +  K   AL+L +EM  + + P   TY+ +  GL +  + E
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            AI    ++   G+ P+   +N II G C   +   A+     M+     P+  T  IL+
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389

Query: 368 SGLCREGILEKA 379
            GL  EG++++A
Sbjct: 390 EGLAYEGLIKEA 401



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 198/350 (56%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+PD VTY  +L+A  K+    +   LL +M+ +G  P+  TYN++V+G C+ G + +A+
Sbjct: 63  CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 122

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             +  +      P+  +YN+++ G C A   E+A  L  EM      P+VVT+N LI+  
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 182

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G    A ++++++ ++G  PN++++N ++  +CK+ K+DKA   +  M   G  PD 
Sbjct: 183 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 242

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V+YNTL+ A C++G ++ A  ++  +  KG     I+ NT++  L    K  EA  LLN 
Sbjct: 243 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 302

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +G   D ++Y T+  G  R+++   A++ + ++++  I P+T  YNA+I GL +  +
Sbjct: 303 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 362

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           T  AID+   ++ +G +P+E+T+  +I G   EG +++A    +++  ++
Sbjct: 363 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 212/412 (51%), Gaps = 20/412 (4%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           + YN ++  +  +G+   A +L+ E+    ++P+A T+N +I+  C  G+   A  ++  
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M      PD VTY  L++A CK    ++A +++D M  KG   + +T N +++ +C E +
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D+A   L +    G   + VSY  ++ G    E+   A +L  EM ++   P+  T+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + G  E A+++L ++ + G  P+  ++N ++H FC + +++KA+ F + MV + 
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PDIV+ N LL+ LCR G ++ A++       KG A   ++YNT+I  L K  + ++A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL+EM  K L PD  TY+ I   L    R+E+A +        GK+    ++PNT    
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR------AFGKVQDMGIRPNT---- 347

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  + Y+  I   C +     A+ +F      G   N+STY  L+ GL
Sbjct: 348 -------VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 193/389 (49%), Gaps = 21/389 (5%)

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           + +N M+  YC  G++D A ++V  M      PD  TYNTLI   C  G    A  ++D 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M R+    + +T   +L   C      +A  LL+    +G   D V+Y  ++ G  ++ +
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A++    +      P+T +YN ++ GL  + + E A +++ E+ Q G  P+  TFN 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I   C +G VE AL+   ++ +    P+ ++ N LL   C++  ++KA+ F    + +G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D V+YNTL+++LC+   ++ A  LL ++++K   P   +Y  +   L ++G+ +EA 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +  + MV  G                 + P  I+YS      C + R +DA++ F + + 
Sbjct: 298 ELLNEMVSKG-----------------LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 340

Query: 511 KGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            GI  N   Y  ++ GL KRR++ S A+D
Sbjct: 341 MGIRPNTVLYNAIILGLCKRRETHS-AID 368



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 143/284 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +GC P+ V+YN +L  L    +  +  +L+ +M ++G  PN  T+N+L+S  C+ G 
Sbjct: 128 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 187

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+ V++ + +    P+  +YN L++ +C    +++A      M S    PD+V+YNT
Sbjct: 188 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 247

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     SG    A +L+ +L + G  P  +++N +I    K GK  +A +++  M   G
Sbjct: 248 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 307

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY+T+    C+   +E+A R    +   G++ NT+  N I+  LC  ++   A 
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 367

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            L       G   +E +Y  LI G   +     A  L DE+  R
Sbjct: 368 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 283/592 (47%), Gaps = 55/592 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C P   +YN I++ L + G  ++   +   MK  G+ P+  T+ I +  +C  G 
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R+++ M       +  +Y  +I+G+       EA+ L  EM    + PD++T+N 
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   E+ KL  ++ + G+ PN  T NI I+  C++G ID+A +++ ++   G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD ++YNTLI   CK   + EA   +  M   G++ N  T NTI++  C    +  A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L  A  +G+  DE +Y +LI G   D   NRA+ ++ E  E+    S   YN ++ GL
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 301 SQSGKTEQAIDM-----------------------------------LNELLQSGMIPDE 325
           S+ G   QA+ +                                   LN+ +  G IPD 
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            TFNT+I G+C +  ++KA++  + M+     PD++T N LL+GLC+   L+  +  F++
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + KG   + +TYN LI S CK+R++ +A  L  EM+ + L PD  T   +   L  +G 
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 446 LEEAQ----------KFT-SIMVETGKINHQVVQPNTSKTPE--------EIDPSSISYS 486
           L++A           KF+ S  +    IN    + N S   +        +  P + +Y 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             I+ +C  G    A     E   KG+  + +T   ++N L    + +S+AV
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR-LSEAV 692



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 239/498 (47%), Gaps = 36/498 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T+N ++  L KKG + E   L S + K+G+ PN  T+NI + G C+ G + EA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+++ +      PDV +YN LI G+C    L EA     +M +  + P+  TYNT+IN 
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G    A K++ +    G  P+  T++ +I   C +G +++A  +     E GF   
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YNTL+    K G + +A ++M  M   G   +  T N +++ LC    L +A  +LN
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A  +G   D  ++ TLI GY +    ++A+++ D M    I P   TYN ++ GL ++ 
Sbjct: 451 DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKAR 510

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +  +D    +L+ G  P+  T+N +I  FC + +V +A++   +M  +   PDIVT  
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570

Query: 365 ILLSGLCREGILEKALKFFRSWILKGK--------------------------------- 391
            L+ GLC  G L+KA + F +   + K                                 
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGG 630

Query: 392 ---AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
              A D+ TY  +I S CK   ++ A   L E   K L P   T   +   L  + RL E
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690

Query: 449 AQKFTSIMVETGKINHQV 466
           A    ++MV+ G +  +V
Sbjct: 691 AVVIINLMVQNGIVPEEV 708



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 268/531 (50%), Gaps = 23/531 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRT---TYNILVSGYCKLGWLKEAMRVV 68
           TY  +++ L   GK   + D+L++M+K   V ++     Y  ++  Y + G ++EA+ V 
Sbjct: 42  TYKCMIEKLGLHGKFEAMEDVLAEMRKN--VDSKMLEGVYIGIMRDYGRKGKVQEAVNVF 99

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P V +YN ++N     G   +A ++   M+ + + PDV T+   +  F  +
Sbjct: 100 ERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCIT 159

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR   A +L++ +   G + NAV++  +I  + KE    +A  +   M + G  PD +T+
Sbjct: 160 GRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTF 219

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI   CK GN++E+ ++   + ++G+  N  T N  +  LC +  +DEA  LL S   
Sbjct: 220 NKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVS 279

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D +SY TLI G+ +  K   A     +M    + P+ FTYN +I G  ++G  + 
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN 339

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L + +  G IPDE T++++I+G C++G + +A+    + +EK FK  I+  N L+ 
Sbjct: 340 ADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVK 399

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL ++G++ +AL+  +  +  G + D  TYN +++ LCK   L DA G+L++   K   P
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D +T+  +     +   +++A +    M+  G                 I P  I+Y+  
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG-----------------ITPDVITYNTL 502

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +N  C   +  + +  F+   +KG   N  TY  L+    K RK +S+A++
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK-VSEAME 552



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 249/516 (48%), Gaps = 17/516 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            Y  I+    +KGK+ E  ++   M      P+  +YN +++   + G+  +A +V   M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PDV+T+ + +  +C  G    A RL   M       + V+Y  +I+ F++    
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +EA+ L DE+ + GI P+ +T N +I   CK+G + ++ K+   + + G  P+  T+N  
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ G ++EA R+++ +  +GL  + I+ NT++   C   KL EA   L+     G 
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +E +Y T+I G+ +      A K+  +   +  +P  FTY+++I GL   G   +A+ 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E ++ G       +NT++ G   +G V +ALQ    M+E    PDI T N++++GLC
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G L  A       I KG   D  T+NTLI   CK+R ++ A  +L  M    + PD  
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   L ++ +L+        M+E G                   P+ I+Y+  I  
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKG-----------------CTPNIITYNILIES 540

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            C   +  +A+++F+E + +G+  +  T   L+ GL
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 140/289 (48%), Gaps = 36/289 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD  TYN +++ L K G L++   +L+D   +G +P+  T+N L+ GYCK   + +A
Sbjct: 421 GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKA 480

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M  +   PDV TYN L+NG C A  L+      K M      P+++TYN LI  
Sbjct: 481 IEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE------ 178
           F +  +  EA +L  E+   G+ P+ VT   +I   C  G++DKA ++   +E+      
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY 600

Query: 179 ---------NGF---------------------SPDCVTYNTLIDANCKAGNMEEAFRMM 208
                    N F                     +PD  TY  +ID+ CK GN++ A   +
Sbjct: 601 STAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFL 660

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
                KGL  +  T   +L+ LC   +L EA +++N   + G   +EV+
Sbjct: 661 LENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G  C PDN TY  ++D+  K G ++     L +   +GLVP+ TT   +++  C    
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 61  LKEAMRVVDLMTQNKSLPD 79
           L EA+ +++LM QN  +P+
Sbjct: 688 LSEAVVIINLMVQNGIVPE 706


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 255/458 (55%), Gaps = 1/458 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T+N +++      +LN    +++ + K G  P+  T N L+ G C  G 
Sbjct: 79  MELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGK 138

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYN 119
           +KEA+   D + + +   D  +Y  LING C +G    A +L +++E L L+ PDV+ Y 
Sbjct: 139 VKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYT 198

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I+ F +    ++A+ L  E+    I PN VT N +I  +C  G++ +A  ++  M  N
Sbjct: 199 AIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLN 258

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P+  T+N LID  CK G +++A  ++ VM ++G++ N +T  +++      K++++A
Sbjct: 259 NVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKA 318

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + N+ S RG   +  SY  +I G  +++  + A+KL+ EM  + + P+T TY+++I G
Sbjct: 319 KHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDG 378

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +SG+     D+++E+   G   +  T+N++++G C   QV+KA+    KM ++  +PD
Sbjct: 379 LCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPD 438

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + T   L+ GLC+ G L+ A + ++  + KG  ++   Y  +I+ LCKE   ++A  LLS
Sbjct: 439 MSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLS 498

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           +ME+    PD  TY  + +AL ++ +  +A K    M+
Sbjct: 499 QMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 536



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 242/461 (52%), Gaps = 18/461 (3%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           ++  N   P ++ +N +++        + A    ++ME   + P++ T+N LIN F    
Sbjct: 43  ILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLC 102

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   AF ++ ++ + G +P+ VT N +++  C  GK+ +A     ++    F  D V+Y 
Sbjct: 103 QLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYG 162

Query: 190 TLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           TLI+  CK+G    A +++  + G   ++ + I    I+ + C +K + +AY L +    
Sbjct: 163 TLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIV 222

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +  Y + V++ +LI G+    +   A+ L +EM    + P+ +T+N +I GL + G+ ++
Sbjct: 223 KKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKK 282

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L+ +++ G+ P+  T+ +++ G+    +V KA    N +  +   P++ + +++++
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC+  ++++A+K F+   LK    ++VTY++LI  LCK  R+ D + L+ E+  +    
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY ++   L ++ ++++A    + M + G      +QP+ S           +Y+  
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEG------IQPDMS-----------TYTTL 445

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  C  GR KDA +I+++   KG  +N   Y  ++NGL K
Sbjct: 446 VDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCK 486



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 225/456 (49%), Gaps = 5/456 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    +N IL +L K             M+ +G+ P   T+NIL++ +  L  L  A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  + +    PD  T N L+ G C  G ++EA      +   +   D V+Y TLIN   +
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 128 SGRSMEAFKLIDELDEHG---IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           SG +  A +L+ +++  G   ++P+ + +  +I  +CK+  +  A  +   M      P+
Sbjct: 171 SGETRAALQLLRKIE--GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N+LI   C  G ++EA  +++ M    +  N  T N ++  LC E ++ +A  +L+
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLS 288

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K+G   + V+Y +L+ GYF  ++ N+A  +++ +  R + P+  +Y+ MI GL ++ 
Sbjct: 289 VMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNK 348

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ +  E+    M P+  T++++I G C  G++       +++  +    +I+T N
Sbjct: 349 MVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYN 408

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL+GLC+   ++KA+        +G   D  TY TL+  LCK  RL+DA  +  ++  K
Sbjct: 409 SLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
               +   Y  +   L + G  +EA    S M + G
Sbjct: 469 GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG 504



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 161/278 (57%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+N ++D L K+G++ +   +LS M KQG+ PN  TY  L+ GY  +  + +A  V
Sbjct: 262 PNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHV 321

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + ++     P+V +Y+++ING C   M++EA +L KEM    + P+ VTY++LI+   +
Sbjct: 322 FNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCK 381

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR  + + LIDE++  G   N +T+N ++   CK  ++DKA  ++  M++ G  PD  T
Sbjct: 382 SGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMST 441

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TL+D  CK G +++A R+   +  KG  +N      +++ LC E   DEA  LL+   
Sbjct: 442 YTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQME 501

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
             G   D V+Y TLI+  F++ K  +A+KL  EM  R+
Sbjct: 502 DNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARE 539



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 200/382 (52%), Gaps = 1/382 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEAMRV 67
           D V+Y T+++ L K G+      LL  ++   LV P+   Y  ++  +CK   + +A  +
Sbjct: 157 DQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDL 216

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M   K  P+V T+N LI G+C  G L+EA  L  EM    + P+V T+N LI+   +
Sbjct: 217 YSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCK 276

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A  ++  + + G++PN VT+  ++  Y    +++KA  +   +   G +P+  +
Sbjct: 277 EGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHS 336

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ +I+  CK   ++EA ++   M  K +  NT+T ++++  LC   ++ + + L++  +
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEIN 396

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   + ++Y +L+ G  ++ + ++A+ L  +MK+  I P   TY  ++ GL ++G+ +
Sbjct: 397 NRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLK 456

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +  +LL  G   +   +  +I+G C EG  ++AL   ++M +    PD VT   L+
Sbjct: 457 DAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLI 516

Query: 368 SGLCREGILEKALKFFRSWILK 389
           S L +     KA+K  R  I +
Sbjct: 517 SALFKNNKNGKAVKLLREMIAR 538



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 201/409 (49%), Gaps = 21/409 (5%)

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           ++ +F  I  ++ H   P     N ++    K      A    + ME  G  P+  T+N 
Sbjct: 36  AVSSFNHILHMNNH--TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+       +  AF M+  + + G + +T+T+NT+L  LC   K+ EA    +   ++ 
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM-PSTFTYNAMIWGLSQSGKTEQA 309
           ++LD+VSYGTLI G  +  +   AL+L  +++   ++ P    Y A+I    +      A
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            D+ +E++   + P+  TFN++I+GFC  GQ+++A+   N+M   +  P++ T NIL+ G
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC+EG ++KA       I +G   + VTY +L+      + +  A  + + +  + + P+
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
            ++Y+ +   L ++  ++EA K    M                   + + P++++YS  I
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEM-----------------HLKNMTPNTVTYSSLI 376

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +  C  GR  D   + +E   +G   N  TY +L+NGL K  + + KA+
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQ-VDKAI 424


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 144/425 (33%), Positives = 232/425 (54%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           MK++G+VP   T N ++S + KL  ++ A  +   M + +    V+T+N+++N  C  G 
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      ME L   P+VV+YNT+I+ +   G    A +++D +   GI+P++ T+  
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   CKEG++++A  +   M E G  P+ VTYNTLID  C  G++E AF   D M +KG
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  +  T N ++H L  E ++ EA  ++    K+G   D ++Y  LI GY R   A +A 
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L +EM  + I P+  TY ++I+ LS+  + ++A D+  ++L  G+ PD   FN ++ G 
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C+ G VE+A     +M  KS  PD VT N L+ G CREG +E+A         +G   D 
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 564

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           ++YNTLIS   +   ++DAF +  EM      P   TY A+   L ++   + A++    
Sbjct: 565 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 624

Query: 456 MVETG 460
           MV  G
Sbjct: 625 MVNKG 629



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/369 (34%), Positives = 198/369 (53%), Gaps = 35/369 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  P+ V+YNTI+     +G +   R +L  M+ +G+ P+  TY  L+SG CK G 
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  + D M +   +P+  TYN LI+G+CN G LE AF  R EM    ++P V TYN 
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---- 176
           L++  F  GR  EA  +I E+ + GI P+A+T+NI+I  Y + G   KA  +   M    
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454

Query: 177 -------------------------------EENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                                           + G SPD + +N ++D +C  GN+E AF
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M RK +  + +T NT++   C E K++EA MLL+   +RG   D +SY TLI+GY
Sbjct: 515 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 574

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R      A ++ DEM      P+  TYNA+I  L ++ + + A ++L E++  G+ PD+
Sbjct: 575 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 634

Query: 326 TTFNTIIHG 334
           +T+ ++I G
Sbjct: 635 STYLSLIEG 643



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 216/394 (54%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +++ L K+GKL + R+ +  M+  G  PN  +YN ++ GY   G ++ A R++D M
Sbjct: 251 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PD +TY  LI+G C  G LEEA  L  +M  + L+P+ VTYNTLI+ +   G  
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             AF   DE+ + GI P+  T+N+++     EG++ +A  +++ M + G  PD +TYN L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+   + GN ++AF + + M  KG++   +T  ++++ L    ++ EA  L      +G 
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D + +  ++ G+  +    RA  L  EM  + + P   T+N ++ G  + GK E+A  
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+E+ + G+ PD  ++NT+I G+   G ++ A +  ++M+   F P ++T N L+  LC
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 610

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +    + A +  +  + KG + D  TY +LI  +
Sbjct: 611 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 228/457 (49%), Gaps = 17/457 (3%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           S+     +++L+   C     +EAF+    M+   ++P + T N +++ F +  R   A+
Sbjct: 175 SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 234

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L  E+    I     T NIM+   CKEGK+ KA + +  ME  GF P+ V+YNT+I   
Sbjct: 235 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 294

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
              GN+E A R++D M  KG++ ++ T  +++  +C E +L+EA  L +   + G   + 
Sbjct: 295 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 354

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y TLI GY       RA    DEM ++ IMPS  TYN ++  L   G+  +A DM+ E
Sbjct: 355 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 414

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + + G+IPD  T+N +I+G+   G  +KA   HN+M+ K  +P  VT   L+  L R   
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +++A   F   + +G + D + +N ++   C    +E AF LL EM+ K + PD  T+  
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +       G++EEA+     M   G                 I P  ISY+  I+ +  +
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRG-----------------IKPDHISYNTLISGYGRR 577

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           G  KDA ++ +E    G      TY  L+  L K ++
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 250/500 (50%), Gaps = 17/500 (3%)

Query: 28  EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
           E+ D L+  + +  V +   +++LV   C+L    EA +   +M +   +P + T N ++
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 221

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           + +     +E A+ L  EM  L++   V T+N ++N   + G+  +A + I  ++  G K
Sbjct: 222 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 281

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           PN V++N +I  Y   G I+ A +I+  M   G  PD  TY +LI   CK G +EEA  +
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 341

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D M   GL  N +T NT++   C +  L+ A+   +   K+G      +Y  L+   F 
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 401

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + +   A  +  EM+++ I+P   TYN +I G S+ G  ++A D+ NE+L  G+ P   T
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           + ++I+      ++++A     K++++   PD++  N ++ G C  G +E+A    +   
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 521

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            K    D VT+NTL+   C+E ++E+A  LL EM+ + + PD  +Y  + +     G ++
Sbjct: 522 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 581

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A +    M+  G                  +P+ ++Y+  I   C       A ++ +E
Sbjct: 582 DAFRVRDEMLSIG-----------------FNPTLLTYNALIKCLCKNQEGDLAEELLKE 624

Query: 508 TRQKGIAINKSTYMNLMNGL 527
              KGI+ + STY++L+ G+
Sbjct: 625 MVNKGISPDDSTYLSLIEGM 644


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 240/461 (52%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F   P   + N +L    K GK + V+    DM   G  P   TYNI++    K G 
Sbjct: 89  MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGD 148

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  + + M     +PD  TYN +I+G+   G L++     +EM+S+   PDV+TYN+
Sbjct: 149 IEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNS 208

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +SG+  +  +   E+ + G+KPN V+++ ++  +CKE  + +A K   +M   G
Sbjct: 209 LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVG 268

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY +L+DANCK GN+ +AFR+ + M   G++ N +T   ++  LC  +++ EA 
Sbjct: 269 HVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAE 328

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   +  SY  LI G+ + +  +RAL+L +E+K R I P    Y   IWGL
Sbjct: 329 KLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGL 388

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K E A  ++NE+ ++G+  +   + T++  +   G   + L    +M E   +  +
Sbjct: 389 CGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTV 448

Query: 361 VTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           VT  +L+ GLC+  ++ KA+ +F R     G   ++  Y  +I  LCKE +++ A  L  
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFE 508

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M ++ L PDR  Y ++    ++ G + EA      M E G
Sbjct: 509 QMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG 549



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 236/527 (44%), Gaps = 42/527 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN ++D ++K+G +   R L  +MK +GL+P+  TYN ++ GY K+G 
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L + +   + M      PDV TYN LIN +C +G L +     +EM+   L P+VV+Y+T
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +     +A K   ++   G  PN  T+  ++   CK G +  A ++   M E G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + VTY  LID  C A  M+EA ++   M   G+  N  + N ++H     K +D A 
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 241 MLLNSASKRGYYLDEVSYGTLITG-----------------------------------Y 265
            LLN    RG   D + YGT I G                                   Y
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIPD 324
           F+       L L +EM+E     +  T+  +I GL ++    +AID    +    G+ P+
Sbjct: 424 FKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +  +I G C E QV+ A     +M ++   PD      L+ G  ++G + +AL    
Sbjct: 484 AAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRD 543

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G  +D + Y +L+    +  +L+ A   L EM  +++ PD      +     E G
Sbjct: 544 KMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELG 603

Query: 445 RLEEAQKFTSIMVETGKINHQVV-QPNTSKTPEEIDPSSISYSEKIN 490
            ++EA    S +++     HQ++   N +  P   DPS   + E  N
Sbjct: 604 CIDEAVGLQSYLMK-----HQLLTSDNNNALPNYSDPSLDFFEEHRN 645



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 247/520 (47%), Gaps = 20/520 (3%)

Query: 14  NTIL-DALFKKGKLNEVRDLLSDM--KKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           N+IL + +  K +L E  D+  ++   +   VP    ++ L S    LG L+EA +    
Sbjct: 30  NSILREIVLSKAELEEC-DVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSK 88

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M + +  P   + N L++ +   G  +   R  K+M      P V TYN +I+  ++ G 
Sbjct: 89  MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGD 148

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  L +E+   G+ P+ VT+N MI  Y K G++D        M+     PD +TYN+
Sbjct: 149 IEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNS 208

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  CK+G + +       M + GLK N ++ +T++   C E  + +A        + G
Sbjct: 209 LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVG 268

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           +  +E +Y +L+    +    + A +L +EM E  +  +  TY A+I GL  + + ++A 
Sbjct: 269 HVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAE 328

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  +++ +G+IP+  ++N +IHGF     +++AL+  N++  +  +PD++     + GL
Sbjct: 329 KLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGL 388

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C    +E A          G   +++ Y TL+ +  K     +   LL EM+E       
Sbjct: 389 CGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTV 448

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T+  +   L ++  + +A  +   M      N   +QPN +            Y+  I+
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRMS-----NDFGLQPNAA-----------VYTAMID 492

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             C + + K A  +FE+  Q+G+  +++ Y +LM+G +K+
Sbjct: 493 GLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQ 532


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 264/507 (52%), Gaps = 18/507 (3%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           FK+       D+   +  +G+ P++TT NIL++   +    ++     D++ +  S PDV
Sbjct: 191 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDV 249

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           + +   IN +C  G +EEA +L  +ME   + P+VVT+NT+I+     GR  EAF   ++
Sbjct: 250 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 309

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E G++P  +T++I++K   +  +I  A  +++ M + GF P+ + YN LID+  +AG+
Sbjct: 310 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + +A  + D+M  KGL + + T NT++   C   + D A  LL      G+ +++ S+ +
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I         + AL+   EM  R + P       +I GL + GK  +A+++  + L  G
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            + D  T N ++HG C  G++++A +   +++ +    D V+ N L+SG C +  L++A 
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
            F    + +G   D+ TY+ LI  L    ++E+A     + +   + PD YTY+ +    
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 609

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++ R EE Q+F   M+         VQPNT           + Y+  I  +C  GR   
Sbjct: 610 CKAERTEEGQEFFDEMMSKN------VQPNT-----------VVYNHLIRAYCRSGRLSM 652

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGL 527
           AL++ E+ + KGI+ N +TY +L+ G+
Sbjct: 653 ALELREDMKHKGISPNSATYTSLIKGM 679



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 268/562 (47%), Gaps = 54/562 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   + T ++A  K GK+ E   L S M++ G+ PN  T+N ++ G    G   EA
Sbjct: 244 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 303

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + M +    P + TY++L+ G   A  + +A+ + KEM      P+V+ YN LI+ 
Sbjct: 304 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 363

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--- 181
           F E+G   +A ++ D +   G+   + T+N +IK YCK G+ D A ++++ M   GF   
Sbjct: 364 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 423

Query: 182 --------------------------------SPDCVTYNTLIDANCKAGNMEEAFRMMD 209
                                           SP      TLI   CK G   +A  +  
Sbjct: 424 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 483

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
               KG  ++T T N +LH LC   KLDEA+ +      RG  +D VSY TLI+G    +
Sbjct: 484 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 543

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K + A    DEM +R + P  +TY+ +I GL    K E+AI   ++  ++GM+PD  T++
Sbjct: 544 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 603

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +I G C   + E+  +F ++M+ K+ +P+ V  N L+   CR G L  AL+       K
Sbjct: 604 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 663

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES-GRLEE 448
           G + +S TY +LI  +    R+E+A  L  EM  + L P+ + Y    TAL++  G+L +
Sbjct: 664 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY----TALIDGYGKLGQ 719

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
             K   ++ E    N              + P+ I+Y+  I  +   G   +A ++  E 
Sbjct: 720 MVKVECLLREMHSKN--------------VHPNKITYTVMIGGYARDGNVTEASRLLNEM 765

Query: 509 RQKGIAINKSTYMNLMNGLIKR 530
           R+KGI  +  TY   + G +K+
Sbjct: 766 REKGIVPDSITYKEFIYGYLKQ 787



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 259/527 (49%), Gaps = 28/527 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T N +L +L +  +  +  +   D+  +G+ P+   +   ++ +CK G ++EA
Sbjct: 210 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 268

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++   M +    P+V T+N +I+G    G  +EAF  +++M    + P ++TY+ L+  
Sbjct: 269 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 328

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + R  +A+ ++ E+ + G  PN + +N +I  + + G ++KA +I   M   G S  
Sbjct: 329 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 388

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY---- 240
             TYNTLI   CK G  + A R++  M   G  +N  +  +++  LC     D A     
Sbjct: 389 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 448

Query: 241 -MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL + S  G  L      TLI+G  +  K ++AL+LW +   +  +  T T NA++ G
Sbjct: 449 EMLLRNMSPGGGLLT-----TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 503

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++GK ++A  +  E+L  G + D  ++NT+I G C + ++++A  F ++MV++  KPD
Sbjct: 504 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 563

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T +IL+ GL     +E+A++F+      G   D  TY+ +I   CK  R E+      
Sbjct: 564 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 623

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  K + P+   Y  +  A   SGRL  A +    M   G                 I 
Sbjct: 624 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-----------------IS 666

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           P+S +Y+  I       R ++A  +FEE R +G+  N   Y  L++G
Sbjct: 667 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 713



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 213/447 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN ++D+  + G LN+  ++   M  +GL    +TYN L+ GYCK G    A
Sbjct: 349 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 408

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++  M       +  ++  +I   C+  M + A R   EM    + P      TLI+ 
Sbjct: 409 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 468

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +A +L  +    G   +  T N ++   C+ GK+D+A +I + +   G   D
Sbjct: 469 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 528

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTLI   C    ++EAF  +D M ++GLK +  T + ++  L    K++EA    +
Sbjct: 529 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 588

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D  +Y  +I G  + E+     + +DEM  + + P+T  YN +I    +SG
Sbjct: 589 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 648

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A+++  ++   G+ P+  T+ ++I G     +VE+A     +M  +  +P++    
Sbjct: 649 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  + G + K     R    K    + +TY  +I    ++  + +A  LL+EM EK
Sbjct: 709 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 768

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQK 451
            + PD  TY       ++ G + EA K
Sbjct: 769 GIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 216/426 (50%), Gaps = 24/426 (5%)

Query: 111 LLPDVVTYNTLIN---RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           + P   T N L+    R  E  +  EAF ++ +    G+ P+       I  +CK GK++
Sbjct: 211 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTTAINAFCKGGKVE 266

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A K+   MEE G +P+ VT+NT+ID     G  +EAF   + M  +G++   IT + ++
Sbjct: 267 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 326

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L   K++ +AY +L   +K+G+  + + Y  LI  +      N+A+++ D M  + + 
Sbjct: 327 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 386

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            ++ TYN +I G  ++G+ + A  +L E+L  G   ++ +F ++I   CS    + AL+F
Sbjct: 387 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 446

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M+ ++  P       L+SGLC+ G   KAL+ +  ++ KG  VD+ T N L+  LC+
Sbjct: 447 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 506

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +L++AF +  E+  +    DR +Y  + +      +L+EA  F   MV+ G       
Sbjct: 507 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG------- 559

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     + P + +YS  I    +  + ++A+Q +++ ++ G+  +  TY  +++G 
Sbjct: 560 ----------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 609

Query: 528 IKRRKS 533
            K  ++
Sbjct: 610 CKAERT 615



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 187/405 (46%), Gaps = 45/405 (11%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
            + +M  + + P       L+SG CK G   +A+ +         + D  T N L++G C
Sbjct: 446 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 505

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
            AG L+EAFR++KE+     + D V+YNTLI+      +  EAF  +DE+ + G+KP+  
Sbjct: 506 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 565

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T++I+I       K+++A +   + + NG  PD  TY+ +ID  CKA   EE     D M
Sbjct: 566 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 625

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             K ++ NT+                                    Y  LI  Y R  + 
Sbjct: 626 MSKNVQPNTVV-----------------------------------YNHLIRAYCRSGRL 650

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + AL+L ++MK + I P++ TY ++I G+S   + E+A  +  E+   G+ P+   +  +
Sbjct: 651 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 710

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G+   GQ+ K      +M  K+  P+ +T  +++ G  R+G + +A +       KG 
Sbjct: 711 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 770

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             DS+TY   I    K+  + +AF           G D   YAAI
Sbjct: 771 VPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAI 805



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 141/278 (50%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+ D V+YNT++     K KL+E    L +M K+GL P+  TY+IL+ G   +  ++
Sbjct: 522 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 581

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA++  D   +N  LPDV+TY+++I+G C A   EE      EM S  + P+ V YN LI
Sbjct: 582 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 641

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             +  SGR   A +L +++   GI PN+ T+  +IK      ++++A  +   M   G  
Sbjct: 642 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 701

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+   Y  LID   K G M +   ++  M  K +  N IT   ++     +  + EA  L
Sbjct: 702 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 761

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           LN   ++G   D ++Y   I GY +      A K  DE
Sbjct: 762 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799


>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 555

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 235/444 (52%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N IL  L   GKL +   L+  M +   VP+  + + LV G  ++  L +AM ++
Sbjct: 99  DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVIL 158

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M  +  +PD  TYNM+I   C  G +  A  L ++M      PDV+TYNT+I   F+ 
Sbjct: 159 RIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDH 218

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G + +A +   +   +G  P  +T+ ++++  C+     +A  ++ +M   G  PD VTY
Sbjct: 219 GNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTY 278

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N+L++ NC+ GN+EE   ++  +   GL++NT+T NT+LH+LC  +  DE   +LN   +
Sbjct: 279 NSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQ 338

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
             Y    ++Y  LI G  +    +RA+  + +M E++ +P   TYN ++  +S+ G  + 
Sbjct: 339 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDD 398

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AI++L  L  +  +P   T+N++I G   +G ++KAL+ ++ M++    PD +T   L+ 
Sbjct: 399 AIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIY 458

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G CR  ++E+A +  +    +G  +   TY  +I  LCK+R +E A  ++  M      P
Sbjct: 459 GFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKP 518

Query: 429 DRYTYAAIHTALVESGRLEEAQKF 452
           D   Y AI   + E G   EA + 
Sbjct: 519 DETIYTAIVKGVEEMGMGSEAVQL 542



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 202/416 (48%), Gaps = 17/416 (4%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T N +++    +G+  +A KL++ +  H   P+  + + +++   +  ++DKA  I+R M
Sbjct: 102 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVILRIM 161

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             +G  PD +TYN +I   CK G++  A  +++ M   G   + IT NT++  +      
Sbjct: 162 VMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNA 221

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           ++A        + G     ++Y  L+    R   + RA+ + ++M      P   TYN++
Sbjct: 222 EQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSL 281

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +    + G  E+   ++  +L  G+  +  T+NT++H  CS    ++  +  N M + S+
Sbjct: 282 VNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSY 341

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P ++T NIL++GLC+  +L +A+ FF   + +    D VTYNTL+ ++ KE  ++DA  
Sbjct: 342 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIE 401

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL  ++     P   TY ++   L   G +++A +    M++ G                
Sbjct: 402 LLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAG---------------- 445

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            I P  I+    I   C     ++A Q+ +ET  +G  I  STY  ++ GL K+R+
Sbjct: 446 -ISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKRE 500



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 176/378 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +TYN I+  L KKG +     LL DM   G  P+  TYN ++      G  ++A
Sbjct: 165 GGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNAEQA 224

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R      +N   P + TY +L+   C       A  + ++M      PD+VTYN+L+N 
Sbjct: 225 IRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSLVNY 284

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   E   +I  +  HG++ N VT+N ++   C     D+  +I+  M +  + P 
Sbjct: 285 NCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPT 344

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI+  CKA  +  A      M  +    + +T NT+L  +  E  +D+A  LL 
Sbjct: 345 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLG 404

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                      ++Y ++I G  R     +AL+L+  M +  I P   T  ++I+G  ++ 
Sbjct: 405 LLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRAN 464

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  +L E    G     +T+  +I G C + ++E A++    M+    KPD     
Sbjct: 465 LVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYT 524

Query: 365 ILLSGLCREGILEKALKF 382
            ++ G+   G+  +A++ 
Sbjct: 525 AIVKGVEEMGMGSEAVQL 542



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 146/283 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTYN++++   ++G L EV  ++  +   GL  N  TYN L+   C   +  E 
Sbjct: 270 GCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEV 329

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++++M Q    P V TYN+LING C A +L  A     +M   K LPD+VTYNTL+  
Sbjct: 330 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGA 389

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A +L+  L      P  +T+N +I    ++G + KA ++  +M + G SPD
Sbjct: 390 MSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPD 449

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T  +LI   C+A  +EEA +++     +G  +   T   ++  LC +++++ A  ++ 
Sbjct: 450 DITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVE 509

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
                G   DE  Y  ++ G       + A++L  ++ + +++
Sbjct: 510 IMLTSGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLTQWKLL 552



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 149/314 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TY  +++ + +        D+L DM  +G  P+  TYN LV+  C+ G L+E 
Sbjct: 235 GCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 294

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+  +  +    +  TYN L++  C+    +E   +   M      P V+TYN LIN 
Sbjct: 295 ALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILING 354

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++     A     ++ E    P+ VT+N ++    KEG +D A +++  ++     P 
Sbjct: 355 LCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPG 414

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN++ID   + G M++A  +   M   G+  + IT  ++++  C    ++EA  +L 
Sbjct: 415 LITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLK 474

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S RG  +   +Y  +I G  +  +   A+++ + M      P    Y A++ G+ + G
Sbjct: 475 ETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKGVEEMG 534

Query: 305 KTEQAIDMLNELLQ 318
              +A+ +  +L Q
Sbjct: 535 MGSEAVQLQKKLTQ 548



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 70/143 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++   CLP  +TYN+++D L +KG + +  +L   M   G+ P+  T   L+ G+C+   
Sbjct: 406 LKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANL 465

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA +V+   +   +     TY ++I G C    +E A  + + M +    PD   Y  
Sbjct: 466 VEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTA 525

Query: 121 LINRFFESGRSMEAFKLIDELDE 143
           ++    E G   EA +L  +L +
Sbjct: 526 IVKGVEEMGMGSEAVQLQKKLTQ 548


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 283/592 (47%), Gaps = 55/592 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C P   +YN I++ L + G  ++   +   MK  G+ P+  T+ I +  +C  G 
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R+++ M       +  +Y  +I+G+       EA+ L  EM    + PD++T+N 
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G   E+ KL  ++ + G+ PN  T NI I+  C++G ID+A +++ ++   G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD ++YNTLI   CK   + EA   +  M   G++ N  T NTI++  C    +  A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L  A  +G+  DE +Y +LI G   D   NRA+ ++ E  E+    S   YN ++ GL
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 301 SQSGKTEQAIDM-----------------------------------LNELLQSGMIPDE 325
           S+ G   QA+ +                                   LN+ +  G IPD 
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            TFNT+I G+C +  ++KA++  + M+     PD++T N LL+GLC+   L+  +  F++
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + KG   + +TYN LI S CK+R++ +A  L  EM+ + L PD  T   +   L  +G 
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 446 LEEAQ----------KFT-SIMVETGKINHQVVQPNTSKTPE--------EIDPSSISYS 486
           L++A           KF+ S  +    IN    + N S   +        +  P + +Y 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             I+ +C  G    A     E   KG+  + +T   ++N L    + +S+AV
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR-LSEAV 692



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 239/498 (47%), Gaps = 36/498 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T+N ++  L KKG + E   L S + K+G+ PN  T+NI + G C+ G + EA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+++ +      PDV +YN LI G+C    L EA     +M +  + P+  TYNT+IN 
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G    A K++ +    G  P+  T++ +I   C +G +++A  +     E GF   
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YNTL+    K G + +A ++M  M   G   +  T N +++ LC    L +A  +LN
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A  +G   D  ++ TLI GY +    ++A+++ D M    I P   TYN ++ GL ++ 
Sbjct: 451 DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKAR 510

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +  +D    +L+ G  P+  T+N +I  FC + +V +A++   +M  +   PDIVT  
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570

Query: 365 ILLSGLCREGILEKALKFFRSWILKGK--------------------------------- 391
            L+ GLC  G L+KA + F +   + K                                 
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGG 630

Query: 392 ---AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
              A D+ TY  +I S CK   ++ A   L E   K L P   T   +   L  + RL E
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690

Query: 449 AQKFTSIMVETGKINHQV 466
           A    ++MV+ G +  +V
Sbjct: 691 AVVIINLMVQNGIVPEEV 708



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 268/531 (50%), Gaps = 23/531 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRT---TYNILVSGYCKLGWLKEAMRVV 68
           TY  +++ L   GK   + D+L++M+K   V ++     Y  ++  Y + G ++EA+ V 
Sbjct: 42  TYKCMIEKLGLHGKFEAMEDVLAEMRKN--VDSKMLEGVYIGIMRDYGRKGKVQEAVNVF 99

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P V +YN ++N     G   +A ++   M+ + + PDV T+   +  F  +
Sbjct: 100 ERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCIT 159

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR   A +L++ +   G + NAV++  +I  + KE    +A  +   M + G  PD +T+
Sbjct: 160 GRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTF 219

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI   CK GN++E+ ++   + ++G+  N  T N  +  LC +  +DEA  LL S   
Sbjct: 220 NKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVS 279

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D +SY TLI G+ +  K   A     +M    + P+ FTYN +I G  ++G  + 
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN 339

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L + +  G IPDE T++++I+G C++G + +A+    + +EK FK  I+  N L+ 
Sbjct: 340 ADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVK 399

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL ++G++ +AL+  +  +  G + D  TYN +++ LCK   L DA G+L++   K   P
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D +T+  +     +   +++A +    M+  G                 I P  I+Y+  
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG-----------------ITPDVITYNTL 502

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +N  C   +  + +  F+   +KG   N  TY  L+    K RK +S+A++
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK-VSEAME 552



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 249/516 (48%), Gaps = 17/516 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            Y  I+    +KGK+ E  ++   M      P+  +YN +++   + G+  +A +V   M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PDV+T+ + +  +C  G    A RL   M       + V+Y  +I+ F++    
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +EA+ L DE+ + GI P+ +T N +I   CK+G + ++ K+   + + G  P+  T+N  
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ G ++EA R+++ +  +GL  + I+ NT++   C   KL EA   L+     G 
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +E +Y T+I G+ +      A K+  +   +  +P  FTY+++I GL   G   +A+ 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E ++ G       +NT++ G   +G V +ALQ    M+E    PDI T N++++GLC
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G L  A       I KG   D  T+NTLI   CK+R ++ A  +L  M    + PD  
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   L ++ +L+        M+E G                   P+ I+Y+  I  
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKG-----------------CTPNIITYNILIES 540

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            C   +  +A+++F+E + +G+  +  T   L+ GL
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 140/289 (48%), Gaps = 36/289 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD  TYN +++ L K G L++   +L+D   +G +P+  T+N L+ GYCK   + +A
Sbjct: 421 GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKA 480

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M  +   PDV TYN L+NG C A  L+      K M      P+++TYN LI  
Sbjct: 481 IEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE------ 178
           F +  +  EA +L  E+   G+ P+ VT   +I   C  G++DKA ++   +E+      
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY 600

Query: 179 ---------NGF---------------------SPDCVTYNTLIDANCKAGNMEEAFRMM 208
                    N F                     +PD  TY  +ID+ CK GN++ A   +
Sbjct: 601 STAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFL 660

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
                KGL  +  T   +L+ LC   +L EA +++N   + G   +EV+
Sbjct: 661 LENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G  C PDN TY  ++D+  K G ++     L +   +GLVP+ TT   +++  C    
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 61  LKEAMRVVDLMTQNKSLPD 79
           L EA+ +++LM QN  +P+
Sbjct: 688 LSEAVVIINLMVQNGIVPE 706


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 262/508 (51%), Gaps = 20/508 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P  VTY  +L+A+ K     +   +L +M+ +G  PN  TYN++++G C+   + +A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++++ ++     PD  +Y  ++ G C A   E+   L  EM     +P+ VT++ L+  F
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G    A +++D + EHG   N    NI+I   CK+G++D A + + NM   G SPD 
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           ++Y T++   C+AG  E+A  +++ M RK    N +T NT +  LC +  +D+A +L+  
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G  +  V+Y  L+ G+    + + AL+L++ +      P+T TY  ++ GL  + +
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAER 464

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A ++L E++Q+    +  TFN ++  FC +G VE+A++   +M+E    P+++T N 
Sbjct: 465 LDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNT 524

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G+  +   E+AL+     + KG ++D++TY++++  L +E R+E+A  +   +++  
Sbjct: 525 LLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG 584

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P    Y  I +AL +    + A  F + MV           PN S           +Y
Sbjct: 585 MRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNS------CMPNES-----------TY 627

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGI 513
              I     +G  K+A  +  E   +G+
Sbjct: 628 VILIEGLAREGLLKEARYVLSELCSRGV 655



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 269/538 (50%), Gaps = 24/538 (4%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG G   D   YNT++    + G+L+  R L++ M    + P+  TY  L+ G C  G +
Sbjct: 97  EGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRV 153

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A+ ++D M + +  P V TY +L+   C +    +A ++  EM +    P++VTYN +
Sbjct: 154 GDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVI 213

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN      R  +A ++++ L  +G +P+ V++  ++K  C   + +    +   M EN  
Sbjct: 214 INGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNC 273

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VT++ L+   C+ G +E A  ++D M   G   NT   N +++++C + ++D+A+ 
Sbjct: 274 VPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFE 333

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            LN+    G   D +SY T++ G  R  +   A +L +EM  +   P+  T+N  I  L 
Sbjct: 334 FLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILC 393

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           Q G  +QAI ++ ++ + G      T+N +++GFC +G+V+ AL+  N +     +P+ +
Sbjct: 394 QKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTI 450

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T   LL+GLC    L+ A +     +     ++ VT+N L+S  C++  +E+A  L+ +M
Sbjct: 451 TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM 510

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E    P+  T+  +   + E    EEA +    +V  G                 I   
Sbjct: 511 MEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG-----------------ISLD 553

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +I+YS  ++    + R ++A+Q+F   +  G+      Y  +++ L KR ++  +A+D
Sbjct: 554 TITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCET-DRAID 610



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 254/511 (49%), Gaps = 23/511 (4%)

Query: 17  LDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKS 76
           L  L  +  L E   L+     +G  P+      L+   C+ G   +A RV+     + +
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
             DV+ YN L+ G+C  G L+ A RL   + S+ + PD  TY  LI    + GR  +A  
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L+D++     +P+ VT+ ++++  CK     +A K++  M   G +P+ VTYN +I+  C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           +   +++A ++++ +   G + +T++  T+L  LC  K+ ++  +L     +     +EV
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           ++  L+  + R     RA+++ D M E     +T   N +I  + + G+ + A + LN +
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G  PD  ++ T++ G C  G+ E A +  N+MV K+  P+ VT N  +  LC++G++
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           ++A+         G +V  VTYN L++  C + R++ A  L + +  +   P+  TY  +
Sbjct: 399 DQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTL 455

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
            T L  + RL+ A +  + M++             +  P  +    ++++  ++  C +G
Sbjct: 456 LTGLCHAERLDAAAELLAEMMQ-------------NDCPLNV----VTFNVLVSFFCQKG 498

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++A+++ ++  + G   N  T+  L++G+
Sbjct: 499 FVEEAIELVQQMMEHGCTPNLITFNTLLDGI 529



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 223/421 (52%), Gaps = 3/421 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +G  PD V+Y T+L  L    +  +V  L  +M +   VPN  T+++LV  +C+ G 
Sbjct: 233 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGM 292

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+ V+D M+++    +    N++IN  C  G +++AF     M S    PD ++Y T
Sbjct: 293 VERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTT 352

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     +GR  +A +L++E+      PN VT N  I   C++G ID+A  ++  M E G
Sbjct: 353 VLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYG 412

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S   VTYN L++  C  G ++ A  + + +     + NTIT  T+L  LC  ++LD A 
Sbjct: 413 CSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAA 469

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +    L+ V++  L++ + +      A++L  +M E    P+  T+N ++ G+
Sbjct: 470 ELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGI 529

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++   +E+A+++L+ L+  G+  D  T+++I+     E ++E+A+Q  + + +   +P  
Sbjct: 530 TEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKA 589

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N +LS LC+    ++A+ FF   +      +  TY  LI  L +E  L++A  +LSE
Sbjct: 590 VMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSE 649

Query: 421 M 421
           +
Sbjct: 650 L 650



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 182/322 (56%), Gaps = 3/322 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PD ++Y T+L  L + G+  + ++LL++M ++   PN  T+N  +   C+ G 
Sbjct: 338 MGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGL 397

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +++ M +      + TYN L+NG+C  G ++ A  L     SL   P+ +TY T
Sbjct: 398 IDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALEL---FNSLPCEPNTITYTT 454

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     + R   A +L+ E+ ++    N VT N+++ ++C++G +++A ++V+ M E+G
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ +T+NTL+D   +  N EEA  ++  +  KG+ ++TIT ++I+  L  E +++EA 
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAV 574

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++    G     V Y  +++   +  + +RA+  +  M     MP+  TY  +I GL
Sbjct: 575 QMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
           ++ G  ++A  +L+EL   G++
Sbjct: 635 AREGLLKEARYVLSELCSRGVL 656


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 237/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  P+  T N ++++     ++     +L+ + K G  P+ TT+  L+ G C  G 
Sbjct: 91  MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      P+V TY  LING C  G    A RL + ME     PDVV Y +
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  ++   GI P+  T+  ++   C   +      ++  M  + 
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V ++T++DA CK G + EA  ++D+M ++G++ + +T  T++   C + ++DEA 
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 330

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   ++G+  D +SY TLI GY +  K ++A+ L++EM  ++ +P T TYN +++GL
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGL 390

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G +PD  T++ ++   C    +E+A+     +   +  PDI
Sbjct: 391 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDI 450

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              NI++ G+CR G LE A   F +   KG      TYN +I  LCK   L +A  L  E
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+     PD  TY  I    +++     A +    M+  G
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 211/426 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ E   L   M  +G  PN  TY  L++G CK+G    
Sbjct: 129 LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 188

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    PDV  Y  +I+  C    + EAF L  +M    + PD+ TY +L++
Sbjct: 189 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 248

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++++    I P+ V  + ++   CKEGK+ +A +IV  M + G  P
Sbjct: 249 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY TL+D +C    M+EA ++ D+M RKG   + I+  T+++  C   K+D+A  L 
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++ +  D  +Y TL+ G     +   A+ L+ EM  R  MP   TY+ ++  L ++
Sbjct: 369 EEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 428

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              E+A+ +L  +  S + PD   +N II G C  G++E A    + +  K   P + T 
Sbjct: 429 RHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 488

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ GLC+ G+L +A K F        + D  TYNT+     +      A  LL EM  
Sbjct: 489 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 548

Query: 424 KKLGPD 429
           +    D
Sbjct: 549 RGFSAD 554



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 206/436 (47%), Gaps = 18/436 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P +V +  L+    +         L  ++D  G+ PN  T NI+I  +C   ++  A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  + + G  PD  T+ TLI   C  G + EA  + D M  +G + N +T  T+++ LC 
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
                 A  LL S  +     D V Y ++I    +D +   A  L+ +M  + I P  FT
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y +++  L    + +    +LN+++ S ++PD   F+T++   C EG+V +A +  + M+
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++  +PD+VT   L+ G C +  +++A+K F   + KG A D ++Y TLI+  CK  +++
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQ 468
            A  L  EM  K+  PD  TY  +   L   GRL++A      MV  G+    + + ++ 
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 469 PNTSKT--------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            +  K                  ++P    Y+  I+  C  G  + A  +F     KG+ 
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 482

Query: 515 INKSTYMNLMNGLIKR 530
            +  TY  +++GL KR
Sbjct: 483 PSVWTYNIMIHGLCKR 498



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 184/370 (49%), Gaps = 2/370 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C PD V Y +I+D+L K  ++ E  +L S M  QG+ P+  TY  LV   C L  
Sbjct: 196 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 255

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K    +++ M  +K LPDV  ++ +++  C  G + EA  +   M    + PDVVTY T
Sbjct: 256 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 315

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++         EA K+ D +   G  P+ +++  +I  YCK  KIDKA  +   M    
Sbjct: 316 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD  TYNTL+   C  G +++A  +   M  +G   + +T + +L +LC  + L+EA 
Sbjct: 376 WIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAM 435

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +        D   Y  +I G  R  +   A  L+  +  + + PS +TYN MI GL
Sbjct: 436 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 495

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A  +  E+  +   PD  T+NTI  GF    +  +A+Q   +M+ + F  D 
Sbjct: 496 CKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD- 554

Query: 361 VTCNILLSGL 370
            +C ++LS L
Sbjct: 555 -SCFLMLSVL 563



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 158/304 (51%), Gaps = 25/304 (8%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V +  L+T   + +  +  L L  +M    + P+ +T N +I       +   A  +L +
Sbjct: 66  VDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAK 125

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +L+ G  PD TTF T+I G C EG++ +AL   +KM+++ F+P++VT   L++GLC+ G 
Sbjct: 126 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
              A++  RS        D V Y ++I SLCK+R++ +AF L S+M  + + PD +TY +
Sbjct: 186 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 245

Query: 436 IHTAL----------------VESGRLEEAQKFTSI---MVETGKIN--HQVVQPNTSKT 474
           +  AL                V S  L +   F+++   + + GK+   H++V     + 
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 305

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              ++P  ++Y+  ++ HC Q    +A+++F+   +KG A +  +Y  L+NG  K  K I
Sbjct: 306 ---VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK-I 361

Query: 535 SKAV 538
            KA+
Sbjct: 362 DKAM 365


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 274/564 (48%), Gaps = 53/564 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+ T ++A  K G++ +  DL   M+  G+ PN  TYN ++ G  K G  +EA
Sbjct: 250 GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEA 309

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R  D M ++K  P V TY +LI+G     M EEA  +  EM S+   P+ V +N LI+ 
Sbjct: 310 LRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDG 369

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA--------------- 169
           +   G   EA ++ DE+   G+KPN VT N +++ +C+  ++++A               
Sbjct: 370 YCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVN 429

Query: 170 ---CKIV--RNMEENGFSPDCVTYNTLIDAN---------------CKAGNMEEAFRM-M 208
              C  V  R ME +GF         L+  N               CK     EA  +  
Sbjct: 430 MDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWF 489

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
            +   KGL  NT+T N +LH LC    ++E + +L    ++G  LD +SY TLI G  + 
Sbjct: 490 KLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKW 549

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            K   A KL +EM +++  P T+TYN ++ GL+  GK +    +L+E  + G +P+  T+
Sbjct: 550 GKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTY 609

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             ++ G+C   ++E A++F   +  +  +   V  NIL++  CR G + +A K   +   
Sbjct: 610 ALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKS 669

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G      TY++LI  +C   R+++A  +  EM  + L P+ + Y A+     + G+++ 
Sbjct: 670 RGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDI 729

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
                SI++E               +   I P+ I+Y+  I+ +C  G  K+A ++  E 
Sbjct: 730 VG---SILLEM--------------SSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM 772

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            + GIA +  TY  L  G  K R+
Sbjct: 773 IRNGIAPDTVTYNALQKGYCKERE 796



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 254/526 (48%), Gaps = 19/526 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T N +L +L K  +L++  ++  D+  QG+ P+  T+   ++ +CK G + +A
Sbjct: 216 GVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDA 274

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M      P+V TYN +I+G   +G  EEA R +  M   K+ P VVTY  LI+ 
Sbjct: 275 VDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISG 334

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     EA +++ E+   G  PN V  N +I  YC++G + +A ++   M   G  P+
Sbjct: 335 LMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPN 394

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+NTL+   C++  ME+A +++  +   GL +N    + ++H L        A  ++ 
Sbjct: 395 FVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVT 454

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE-RQIMPSTFTYNAMIWGLSQS 303
                   + +     L+ G  + E  + A++LW ++   + +  +T T NA++ GL + 
Sbjct: 455 KLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCER 514

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+  ++L ++L+ G++ D  ++NT+I G C  G++E+A +   +MV++ F+PD  T 
Sbjct: 515 GNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTY 574

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GL   G ++   +        G   +  TY  L+   CK  R+EDA      ++ 
Sbjct: 575 NFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDY 634

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +K+      Y  +  A    G + EA K    M   G                 I P+  
Sbjct: 635 EKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRG-----------------ILPTCA 677

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +YS  I+  C  GR  +A +IFEE R +G+  N   Y  L+ G  K
Sbjct: 678 TYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCK 723



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 237/510 (46%), Gaps = 75/510 (14%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNE--------VR---------------------- 30
           MEG G  P+ VTYN ++D LFK G+  E        VR                      
Sbjct: 281 MEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEM 340

Query: 31  -----DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                ++L +M   G  PN   +N L+ GYC+ G + EA+RV D M      P+  T+N 
Sbjct: 341 FEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNT 400

Query: 86  LINGWCNAGMLEEAFRLRKEMES--LKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL-- 141
           L+ G+C +  +E+A ++   + S  L +  DV +Y  +I+R  E    + A K++ +L  
Sbjct: 401 LLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSY--VIHRLMERSGFVSALKIVTKLLS 458

Query: 142 --------------------DEH--------------GIKPNAVTHNIMIKWYCKEGKID 167
                               + H              G+  N VT N ++   C+ G ++
Sbjct: 459 GNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNME 518

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +  ++++ M E G   D ++YNTLI   CK G +EEAF++ + M ++  + +T T N ++
Sbjct: 519 EVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLM 578

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L    K+D+ + LL+ A + G+  +  +Y  L+ GY + ++   A+K +  +   ++ 
Sbjct: 579 KGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVE 638

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            S+  YN +I    + G   +A  + + +   G++P   T++++IHG C  G+V++A + 
Sbjct: 639 LSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEI 698

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M  +   P++     L+ G C+ G ++            G   + +TY  +I   CK
Sbjct: 699 FEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCK 758

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
              +++A  LL+EM    + PD  TY A+ 
Sbjct: 759 LGNMKEARELLNEMIRNGIAPDTVTYNALQ 788



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 210/447 (46%), Gaps = 36/447 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V +N ++D   +KG + E   +  +M  +G+ PN  T+N L+ G+C+   
Sbjct: 351 MYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQ 410

Query: 61  LKEAMRV-VDLMTQNKSLP-DVWTYNM--------------------------------- 85
           +++A +V V +++   S+  DV +Y +                                 
Sbjct: 411 MEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTP 470

Query: 86  LINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           L+ G C      EA  L  ++ ++K L  + VT N L++   E G   E F+++ ++ E 
Sbjct: 471 LVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEK 530

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G+  + +++N +I   CK GKI++A K+   M +  F PD  TYN L+      G +++ 
Sbjct: 531 GLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDV 590

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            R++      G   N  T   +L   C   ++++A     +       L  V Y  LI  
Sbjct: 591 HRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAA 650

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           Y R      A KL D MK R I+P+  TY+++I G+   G+ ++A ++  E+   G++P+
Sbjct: 651 YCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPN 710

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +  +I G C  GQ++       +M     +P+ +T  I++ G C+ G +++A +   
Sbjct: 711 VFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLN 770

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRL 411
             I  G A D+VTYN L    CKER L
Sbjct: 771 EMIRNGIAPDTVTYNALQKGYCKEREL 797



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 36/437 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPN-------------RTTY--- 48
           G  P+ VT+NT+L    +  ++ +   +L  +   GL  N             R+ +   
Sbjct: 390 GMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSA 449

Query: 49  ----------NI---------LVSGYCKLGWLKEAMRVVDLMTQNKSLP-DVWTYNMLIN 88
                     NI         LV G CK     EA+ +   +   K L  +  T N L++
Sbjct: 450 LKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLH 509

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G C  G +EE F + K+M    LL D ++YNTLI    + G+  EAFKL +E+ +   +P
Sbjct: 510 GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQP 569

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +  T+N ++K     GKID   +++   +E GF P+  TY  L++  CKA  +E+A +  
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFF 629

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             +  + ++++++  N ++   C    + EA+ L ++   RG      +Y +LI G    
Sbjct: 630 KNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCI 689

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            + + A ++++EM+   ++P+ F Y A+I G  + G+ +    +L E+  +G+ P++ T+
Sbjct: 690 GRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITY 749

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             +I G+C  G +++A +  N+M+     PD VT N L  G C+E  L   L+      +
Sbjct: 750 TIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNI 809

Query: 389 KGKAVDSVTYNTLISSL 405
                + +TYNTLI  L
Sbjct: 810 GLPLEEEITYNTLIHKL 826


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 272/568 (47%), Gaps = 37/568 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P  +TY+ +L+   K  KL    DL+  ++ + +  NRT Y IL+ G+C+LG 
Sbjct: 395 MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGE 454

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A +++  M  +   PDV TY+ LING C  GM+ E   +   M+   +LP+ V Y T
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 514

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F ++G + EA K   ++   G+  N+V HN ++  + +EG I +A +  + M    
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 574

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D  ++N +ID+ C+ GN+ EAF + D M R G   +  T  ++L  LC    L +A 
Sbjct: 575 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 634

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    ++   +DE +  TL+ G  +    + AL L ++M  R I+P T+TY  ++ G 
Sbjct: 635 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 694

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-------- 352
            + GK   A+ +L  +L+ G++PD   +  +++G  +EGQV+ A     +++        
Sbjct: 695 CKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 754

Query: 353 ----------------------------EKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
                                       E    P   + NIL+ G  ++G L + L  +R
Sbjct: 755 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 814

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + +G   D+VTY  LI  LC+   +E A   L +M  + + PD   +  +  A  E  
Sbjct: 815 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 874

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           ++  A +  S M   G I+         K    + PS ++ S  +   C  G+ ++A+ +
Sbjct: 875 KMSNALQLFSYMKWVGDIDGAFELKEDMKALGVV-PSEVAESSIVRGLCKCGKVEEAIIV 933

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           F    + G+    +T+  LM+GL K  K
Sbjct: 934 FSSIMRAGMVPTIATFTTLMHGLCKEFK 961



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 262/524 (50%), Gaps = 18/524 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+ VTYNTIL+   KKG+      +L DM+K G+  +  TYNI++   CKL     A  
Sbjct: 261 LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    PD  +YN LI+G+   G +  A  +  +M    L P V TY  LI+ + 
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +GR+ EA +++ E+   G++P+ +T++ ++  YCK  K+  A  +++ +     S +  
Sbjct: 381 RNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRT 440

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y  LID  C+ G + +A +++  M   G+  + IT + +++ +C    + E   +L+  
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G   + V Y TL+  + +   A  ALK + ++    ++ ++  +NA++    + G  
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMI 560

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A      + +  +  D  +FN II  +C  G V +A   ++ MV   + PDI T   L
Sbjct: 561 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 620

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLC+ G L +A +F    + K  A+D  T NTL+  +CK   L++A  L  +M  + +
Sbjct: 621 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 680

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD YTY  +     + G++  A     +M+E G +                 P +I+Y+
Sbjct: 681 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV-----------------PDTIAYT 723

Query: 487 EKINEHCSQGRYKDALQIFEETRQK-GIAINKSTYMNLMNGLIK 529
             +N   ++G+ K A  +F+E   K G+  +   Y ++MNG +K
Sbjct: 724 CLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 219/438 (50%), Gaps = 17/438 (3%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            PD  TY ++L  L + G L + ++ +  + ++    +  T N L+ G CK G L EA+ +
Sbjct: 612  PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDL 671

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             + M     LPD +TY +L++G+C  G +  A  L + M    L+PD + Y  L+N    
Sbjct: 672  CEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVN 731

Query: 128  SGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+   A  +  E+  + G+  + + +N M+  Y K G+I++  +++RNM EN   P   
Sbjct: 732  EGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSA 791

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            +YN L+    K G +     +   M ++G+K + +T   ++  LC    ++ A   L   
Sbjct: 792  SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 851

Query: 247  SKRGYYLDEVSYGTLITGYFRDEKANRALKLW----------------DEMKERQIMPST 290
               G + D +++  LI  +    K + AL+L+                ++MK   ++PS 
Sbjct: 852  VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSE 911

Query: 291  FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
               ++++ GL + GK E+AI + + ++++GM+P   TF T++HG C E +++ A      
Sbjct: 912  VAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQL 971

Query: 351  MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
            M     K D+VT N+L++GLC +  +  AL  +     KG   +  TY TL  ++     
Sbjct: 972  MESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGT 1031

Query: 411  LEDAFGLLSEMEEKKLGP 428
            ++D   LL ++E++ + P
Sbjct: 1032 MQDGEKLLKDIEDRGIVP 1049



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 254/533 (47%), Gaps = 19/533 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N IL+AL    K   V   L +   +    + TT NI+++  C  G L +A  ++  M +
Sbjct: 199 NNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-K 257

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
           N  LP+  TYN ++N +   G  + A R+  +ME   +  D+ TYN +I++  +  RS  
Sbjct: 258 NCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSAR 317

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A+ L+  + E  + P+  ++N +I  +  EGKI+ A  I   M      P   TY  LID
Sbjct: 318 AYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALID 377

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C+ G  +EA R++  M   G++ + +T + +L+  C   KL  A  L+     R   +
Sbjct: 378 GYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISI 437

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           +   Y  LI G+ +  + ++A ++   M    I P   TY+A+I G+ + G   +  ++L
Sbjct: 438 NRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 497

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           + + +SG++P+   + T++  FC  G  ++AL++   +       + V  N LL    RE
Sbjct: 498 SRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYRE 557

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++ +A +F +       + D  ++N +I S C+   + +AF +   M      PD  TY
Sbjct: 558 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 617

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETG------KINHQVVQPNTSKTPEE---------- 477
            ++   L + G L +A++F   ++E         +N  +V      T +E          
Sbjct: 618 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677

Query: 478 --IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
             I P + +Y+  ++  C +G+   AL + +   +KG+  +   Y  L+NGL+
Sbjct: 678 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLV 730



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 231/469 (49%), Gaps = 19/469 (4%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           ++++ ++L+N +   G + +A      M+       + + N ++N      +S   +  +
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            E  +     +  T NI++   C +GK+ KA  +++ M +N   P+ VTYNT+++   K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKK 277

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G  + A R++D M + G++ +  T N ++  LC  K+   AY+LL    +     DE SY
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TLI G+F + K N A+ ++++M  + + PS  TY A+I G  ++G+T++A  +L E+  
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G+ P E T++ +++G+C   ++  AL     +  +S   +     IL+ G C+ G + K
Sbjct: 398 TGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSK 457

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A +  +  +  G   D +TY+ LI+ +CK   + +   +LS M++  + P+   Y  +  
Sbjct: 458 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVF 517

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVV------------------QPNTSKTPEEIDP 480
              ++G  +EA K+   +  +G + + V+                  Q     +  +I  
Sbjct: 518 YFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF 577

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              S++  I+ +C +G   +A  +++   + G   +  TY +L+ GL +
Sbjct: 578 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 626



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 159/328 (48%), Gaps = 22/328 (6%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G   D + YN++++   K G++NE+  L+ +M +  + P+  +YNIL+ GY K G L   
Sbjct: 750  GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 809

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +   M +    PD  TY +LI G C  G++E A +  ++M    + PD + ++ LI  
Sbjct: 810  LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKA 869

Query: 125  FFESGRSMEA----------------FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
            F E  +   A                F+L +++   G+ P+ V  + +++  CK GK+++
Sbjct: 870  FSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 929

Query: 169  ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
            A  +  ++   G  P   T+ TL+   CK   +++AF +  +M   GLK++ +T N ++ 
Sbjct: 930  AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 989

Query: 229  TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             LC +K + +A  L      +G   +  +Y TL    +         KL  ++++R I+P
Sbjct: 990  GLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 1049

Query: 289  STFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            S     ++ W      + E AI  LN +
Sbjct: 1050 SYKHPESLEW------RMENAIKRLNTI 1071



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 173/411 (42%), Gaps = 55/411 (13%)

Query: 144 HGIKPNAVTHNIMIKWYC------KEGKIDKA-CKIVRNM-----EENGFSPDCVTYNTL 191
           HG++ + +T   M +W        K GK+DKA  K+   M     +++G       Y   
Sbjct: 55  HGVESSIITVLAMQRWETLSQMAYKSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMA 114

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL--CCEKKLDEAYMLLNSASKR 249
           +    +A    +A  ++  +   G   + I  +++L T+  C    L    +L+N+  K 
Sbjct: 115 VHILVQAQMPSQAMSVLRHLALTGFSCSAI-FSSLLRTISRCDPTNLFSVDLLVNAYVKE 173

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G  LD  +       +F DE   +A              S F+ N ++  L    K+E  
Sbjct: 174 GKVLDAAA-----AIFFMDECGFKA--------------SLFSCNNILNALVGINKSEYV 214

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
              L E L      D TT N +++  C++G++ KA     KM +    P+ VT N +L+ 
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNW 273

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
             ++G  + AL+        G   D  TYN +I  LCK +R   A+ LL  M E  L PD
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 430 RYTY-AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
             +Y   IH    E                 GKIN  +   N     + + PS  +Y+  
Sbjct: 334 ECSYNTLIHGFFGE-----------------GKINLAIYIFN-QMLRQSLKPSVATYTAL 375

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           I+ +C  GR  +A ++  E +  G+  ++ TY  L+NG  K  K +  A+D
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSK-LGPALD 425



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 1/159 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G +P  V  ++I+  L K GK+ E   + S + + G+VP   T+  L+ G CK   
Sbjct: 902  MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFK 961

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A  +  LM       DV TYN+LI G CN   + +A  L +EM+S  LLP++ TY T
Sbjct: 962  IDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYIT 1021

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            L    + +G   +  KL+ ++++ GI P +  H   ++W
Sbjct: 1022 LTGAMYATGTMQDGEKLLKDIEDRGIVP-SYKHPESLEW 1059


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 270/521 (51%), Gaps = 19/521 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ AL  +G++ +   +L +M ++G  P    Y++++   C+ G  + A+RV
Sbjct: 157 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 216

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ +       DV   N+++N  C+ G ++EA  L +++ S    PDVV+YN ++     
Sbjct: 217 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 276

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R     +L++E+      PN VT N +I + C+ G  ++  +++  M E+G +PD   
Sbjct: 277 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 336

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G++E A  +++ M   GLK N +  NT+L  LC  ++ +E   LL    
Sbjct: 337 YATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 396

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +   LD+V++  L+  + ++   +R ++L ++M E   MP   TY  +I G  + G  +
Sbjct: 397 DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLID 456

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G CS  +   A    ++M+++    + +T N L+
Sbjct: 457 EAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 516

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++E+A++  +  ++ G + D ++Y+T+I  L K  + ++A  LL+ M  K + 
Sbjct: 517 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 576

Query: 428 PDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
           P+   Y++I +AL   GR+ +  Q F +I   T                  I   ++ Y+
Sbjct: 577 PNTIIYSSIASALSREGRINKVIQMFDNIQDTT------------------IRSDAVLYN 618

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I+  C +G  + A++        G   N+STY  L+ GL
Sbjct: 619 AVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 659



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 229/424 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  FGC PD V+YN +L  L    +   V++L+ +M +    PN  T+N L+S  C+ G 
Sbjct: 255 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 314

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +    V+  M ++   PD+  Y  +I+G C  G LE A  +   M S  L P+VV YNT
Sbjct: 315 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 374

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     + R  E  +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M E+G
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY T+I+  CK G ++EA  ++  M   G K NTI+   +L  LC  ++  +A 
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 494

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   ++G  L+ +++ TLI    +     +A++L  +M      P   +Y+ +I GL
Sbjct: 495 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 554

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GKT++A+++LN ++  GM P+   +++I      EG++ K +Q  + + + + + D 
Sbjct: 555 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDA 614

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N ++S LC+ G  E+A++F    +  G   +  TY  LI  L  E  +++A  +L+E
Sbjct: 615 VLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 674

Query: 421 MEEK 424
           +  K
Sbjct: 675 LCSK 678



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 254/511 (49%), Gaps = 23/511 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+ IL+A  + G       +L D+  +G   +    N++++  C  G + EA
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNA---GMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + ++  +      PDV +YN ++ G C A   G ++E   L +EM  +   P++VT+NTL
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTFNTL 305

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+    +G      +++ ++ EHG  P+   +  +I   CKEG ++ A +I+  M   G 
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ V YNTL+   C A   EE   ++  M  K   ++ +T N ++   C    +D    
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL    + G   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL 
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            + +   A D++++++Q G   +  TFNT+I+  C +G VE+A++   +M+     PD++
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           + + ++ GL + G  ++AL+     + KG + +++ Y+++ S+L +E R+     +   +
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           ++  +  D   Y A+ ++L + G  E A +F + MV +G +      PN S         
Sbjct: 606 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV------PNES--------- 650

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             +Y+  I    S+G  K+A ++  E   KG
Sbjct: 651 --TYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 236/467 (50%), Gaps = 6/467 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC---KLGWL 61
           GC  D    N +L+A+  +G ++E   LL D+   G  P+  +YN ++ G C   + G +
Sbjct: 224 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 283

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +E M   + M +    P++ T+N LI+  C  G+ E    +  +M      PD+  Y T+
Sbjct: 284 QELM---EEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 340

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+   + G    A ++++ +  +G+KPN V +N ++K  C   + ++  +++  M +   
Sbjct: 341 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 400

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA M
Sbjct: 401 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 460

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL S +  G   + +SY  ++ G    E+   A  L  +M ++    +  T+N +I  L 
Sbjct: 461 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 520

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G  EQAI++L ++L +G  PD  +++T+I G    G+ ++AL+  N MV K   P+ +
Sbjct: 521 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 580

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             + + S L REG + K ++ F +        D+V YN +ISSLCK    E A   L+ M
Sbjct: 581 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 640

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
                 P+  TY  +   L   G ++EAQ+  + +   G +   +++
Sbjct: 641 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMK 687



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 244/518 (47%), Gaps = 20/518 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN ++    + G+L   R L + +    + PN  TY  +V   C  G + +A+ V+D M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +    P    Y++++   C  G    A R+ +++ +     DV   N ++N   + G   
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L+ +L   G +P+ V++N ++K  C   +     +++  M      P+ VT+NTLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C+ G  E    ++  M   G   +     TI+  +C E  L+ A+ +LN     G  
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V Y TL+ G    E+     +L  EM ++       T+N ++    Q+G  ++ I++
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L ++L+ G +PD  T+ T+I+GFC EG +++A+     M     KP+ ++  I+L GLC 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
                 A       I +G  ++ +T+NTLI+ LCK+  +E A  LL +M      PD  +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y+ +   L ++G+ +EA +  ++MV  G                 + P++I YS   +  
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKG-----------------MSPNTIIYSSIASAL 589

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             +GR    +Q+F+  +   I  +   Y  +++ L KR
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 627



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 204/390 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C P+ VT+NT++  L + G    V ++L+ M + G  P+   Y  ++ G CK G 
Sbjct: 290 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +++ M      P+V  YN L+ G C+A   EE   L  EM       D VT+N 
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F ++G      +L++++ EHG  P+ +T+  +I  +CKEG ID+A  ++++M   G
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ ++Y  ++   C A    +A  +M  M ++G  +N IT NT+++ LC +  +++A 
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   D +SY T+I G  +  K + AL+L + M  + + P+T  Y+++   L
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+  + I M + +  + +  D   +N +I   C  G+ E+A++F   MV     P+ 
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKG 390
            T  IL+ GL  EG +++A +       KG
Sbjct: 650 STYTILIRGLASEGFVKEAQEMLTELCSKG 679


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 254/531 (47%), Gaps = 17/531 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T   +++   +K KL     +L    K G  P+  T++ LV+G+C  G 
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +VD M + K  PD+ T + LING C  G + EA  L   M      PD VTY  
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++NR  +SG S  A  L  +++E  IK + V ++I+I   CK+G  D A  +   ME  G
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VTY++LI   C  G  ++  +M+  M  + +  + +T + ++     E KL EA 
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    RG   D ++Y +LI G+ ++   + A +++D M  +   P   TY+ +I   
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + +  + +  E+   G+IP+  T+NT++ GFC  G++  A +   +MV +   P +
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  ILL GLC  G L KAL+ F         +    YN +I  +C   +++DA+ L   
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           + +K + PD  TY  +   L + G L EA      M E G                   P
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG-----------------CTP 587

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
              +Y+  I  H        ++++ EE +  G + + ST   +++ L  RR
Sbjct: 588 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 638



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 237/508 (46%), Gaps = 52/508 (10%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           K+N+  DL   M +   +P    +N L S   +       +     M  N    D++T  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           ++IN +C    L  AF +      L   PD +T++TL+N F   GR  EA  L+D + E 
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
             +P+ VT + +I   C +G++ +A  ++  M E GF PD VTY  +++  CK+GN   A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +   M  + +K + +  + ++ +LC +   D+                          
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-------------------------- 292

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                    AL L++EM+ + I     TY+++I GL   GK +    ML E++   +IPD
Sbjct: 293 ---------ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             TF+ +I  F  EG++ +A + +N+M+ +   PD +T N L+ G C+E  L +A + F 
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 403

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + KG   D VTY+ LI+S CK +R++D   L  E+  K L P+  TY  +     +SG
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 463

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L  A++    MV  G                 + PS ++Y   ++  C  G    AL+I
Sbjct: 464 KLNAAKELFQEMVSRG-----------------VPPSVVTYGILLDGLCDNGELNKALEI 506

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           FE+ ++  + +    Y  +++G+    K
Sbjct: 507 FEKMQKSRMTLGIGIYNIIIHGMCNASK 534



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 218/415 (52%), Gaps = 1/415 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  PD VTY  +L+ L K G      DL   M+++ +  +   Y+I++   CK G 
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ + + M       DV TY+ LI G CN G  ++  ++ +EM    ++PDVVT++ 
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ +EA +L +E+   GI P+ +T+N +I  +CKE  + +A ++   M   G
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY+ LI++ CKA  +++  R+   +  KGL  NTIT NT++   C   KL+ A 
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      RG     V+YG L+ G   + + N+AL+++++M++ ++      YN +I G+
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + K + A  +   L   G+ PD  T+N +I G C +G + +A     KM E    PD 
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T NIL+        L  +++      + G + DS T   +I  L  +RRL+ +F
Sbjct: 590 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKSF 643



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 173/314 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G   +PD VT++ ++D   K+GKL E ++L ++M  +G+ P+  TYN L+ G+CK   
Sbjct: 335 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 394

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++ DLM      PD+ TY++LIN +C A  +++  RL +E+ S  L+P+ +TYNT
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F +SG+   A +L  E+   G+ P+ VT+ I++   C  G+++KA +I   M+++ 
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +     YN +I   C A  +++A+ +   +  KG+K + +T N ++  LC +  L EA 
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ML     + G   D+ +Y  LI  +        +++L +EMK       + T   +I  L
Sbjct: 575 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634

Query: 301 SQSGKTEQAIDMLN 314
           S     +  +DML+
Sbjct: 635 SDRRLDKSFLDMLS 648


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 254/531 (47%), Gaps = 17/531 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T   +++   +K KL     +L    K G  P+  T++ LV+G+C  G 
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +VD M + K  PD+ T + LING C  G + EA  L   M      PD VTY  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++NR  +SG S  A  L  +++E  IK + V ++I+I   CK+G  D A  +   ME  G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VTY++LI   C  G  ++  +M+  M  + +  + +T + ++     E KL EA 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    RG   D ++Y +LI G+ ++   + A +++D M  +   P   TY+ +I   
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + +  + +  E+   G+IP+  T+NT++ GFC  G++  A +   +MV +   P +
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  ILL GLC  G L KAL+ F         +    YN +I  +C   +++DA+ L   
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           + +K + PD  TY  +   L + G L EA      M E G                   P
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG-----------------CTP 558

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
              +Y+  I  H        ++++ EE +  G + + ST   +++ L  RR
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 237/508 (46%), Gaps = 52/508 (10%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           K+N+  DL   M +   +P    +N L S   +       +     M  N    D++T  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           ++IN +C    L  AF +      L   PD +T++TL+N F   GR  EA  L+D + E 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
             +P+ VT + +I   C +G++ +A  ++  M E GF PD VTY  +++  CK+GN   A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +   M  + +K + +  + ++ +LC +   D+                          
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-------------------------- 263

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                    AL L++EM+ + I     TY+++I GL   GK +    ML E++   +IPD
Sbjct: 264 ---------ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             TF+ +I  F  EG++ +A + +N+M+ +   PD +T N L+ G C+E  L +A + F 
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + KG   D VTY+ LI+S CK +R++D   L  E+  K L P+  TY  +     +SG
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L  A++    MV  G                 + PS ++Y   ++  C  G    AL+I
Sbjct: 435 KLNAAKELFQEMVSRG-----------------VPPSVVTYGILLDGLCDNGELNKALEI 477

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           FE+ ++  + +    Y  +++G+    K
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASK 505



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 218/415 (52%), Gaps = 1/415 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  PD VTY  +L+ L K G      DL   M+++ +  +   Y+I++   CK G 
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ + + M       DV TY+ LI G CN G  ++  ++ +EM    ++PDVVT++ 
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ +EA +L +E+   GI P+ +T+N +I  +CKE  + +A ++   M   G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY+ LI++ CKA  +++  R+   +  KGL  NTIT NT++   C   KL+ A 
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      RG     V+YG L+ G   + + N+AL+++++M++ ++      YN +I G+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + K + A  +   L   G+ PD  T+N +I G C +G + +A     KM E    PD 
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T NIL+        L  +++      + G + DS T   +I  L  +RRL+ +F
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKSF 614



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 173/314 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G   +PD VT++ ++D   K+GKL E ++L ++M  +G+ P+  TYN L+ G+CK   
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++ DLM      PD+ TY++LIN +C A  +++  RL +E+ S  L+P+ +TYNT
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F +SG+   A +L  E+   G+ P+ VT+ I++   C  G+++KA +I   M+++ 
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +     YN +I   C A  +++A+ +   +  KG+K + +T N ++  LC +  L EA 
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ML     + G   D+ +Y  LI  +        +++L +EMK       + T   +I  L
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605

Query: 301 SQSGKTEQAIDMLN 314
           S     +  +DML+
Sbjct: 606 SDRRLDKSFLDMLS 619



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 17/273 (6%)

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
           ++SY   +     D K N A+ L++ M + + +P+   +N +   ++++ + +  +    
Sbjct: 35  KLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            +  +G+  D  T   +I+ +C + ++  A     +  +  ++PD +T + L++G C EG
Sbjct: 95  GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            + +A+      +   +  D VT +TLI+ LC + R+ +A  L+  M E    PD  TY 
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   L +SG    A      M E                   I  S + YS  I+  C 
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEE-----------------RNIKASVVQYSIVIDSLCK 257

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            G + DAL +F E   KGI  +  TY +L+ GL
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 270/532 (50%), Gaps = 19/532 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E FGC P   +YN +L+A  +   L +    L+  +  G++PN  TYNIL+    K    
Sbjct: 106 EIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQF 165

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            EA  ++D M      PDV++Y  +ING   +G L  A  +  EM    L+PDV+ YN +
Sbjct: 166 VEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIM 225

Query: 122 INRFFESGRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I+ FF+ G  ++  ++ + L +   + PN VT+N+MI   CK G+ D++ ++   M++N 
Sbjct: 226 IDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNE 285

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D  TY++LI   C  GN++ A  +   M ++ + ++ +T N +L+  C   K+ E++
Sbjct: 286 CEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESF 345

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     K   + + VSY   I G F + K   A+ +W+ ++ R     + TY  +I GL
Sbjct: 346 ELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +A+ +L E    G   D   +++I+ G   +G+V++AL   ++M +   +   
Sbjct: 405 CKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSP 464

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             CN L++G  R   LE+A+ FFR    KG +   V+YNTLI+ LCK  R  DA+  + E
Sbjct: 465 HVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKE 524

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M EK   PD  TY+ +   L +  +++ A      ++  G                 ++P
Sbjct: 525 MLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKG-----------------LEP 567

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               ++  ++  CS G+ +DAL ++   +Q     N  T+  LM+GL K R+
Sbjct: 568 DVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARE 619



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 235/478 (49%), Gaps = 35/478 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKE 63
           G +PD + YN ++D  FK+G   + +++   + K   V PN  TYN++++G CK+G   E
Sbjct: 214 GLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDE 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM----------------- 106
           ++ + + M +N+   D++TY+ LI G C+ G ++ A  + KEM                 
Sbjct: 274 SLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLN 333

Query: 107 ---------ESLKL--------LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                    ES +L          +VV+YN  I   FE+ +  EA  + + L   G   +
Sbjct: 334 GFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGAD 393

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           + T+ ++I   CK G ++KA KI++  ++ G   D   Y++++D   K G ++EA  ++ 
Sbjct: 394 STTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVH 453

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M + G +++    N +++      KL+EA         +G     VSY TLI G  + E
Sbjct: 454 QMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAE 513

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           + + A     EM E+   P   TY+ ++ GL Q  K + A+++  ++L  G+ PD T  N
Sbjct: 514 RFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHN 573

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            ++HG CS G++E AL  ++ M + +  P++VT N L+ GL +    E A   +      
Sbjct: 574 ILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKN 633

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           G   D ++YN  +  LC   R+ D   L  +  +  + P   T+  +  A+++ G L+
Sbjct: 634 GFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 239/461 (51%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F   P   + N +L    K GK ++V+    DM   G  P   TYNI++   CK G 
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  + + M     +PD  TYN +I+G+   G L++     +EM+ +   PDV+TYN 
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F + G+     +   E+  +G+KPN V+++ ++  +CKEG + +A K   +M   G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY +LIDANCK GN+ +AFR+ + M + G++ N +T   ++  LC  +++ EA 
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   +  SY  LI G+ + +  +RAL+L +E+K R I P    Y   IWGL
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K E A  ++NE+ + G+  +   + T++  +   G   + L   ++M E   +  +
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577

Query: 361 VTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           VT  +L+ GLC+  ++ KA+ +F R     G   ++  +  +I  LCK+ ++E A  L  
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M +K L PDR  Y ++     + G + EA      M E G
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 236/467 (50%), Gaps = 6/467 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTYN+++D   K G+L++      +MK     P+  TYN L++ +CK G L   
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M  N   P+V +Y+ L++ +C  GM+++A +   +M  + L+P+  TY +LI+ 
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +AF+L +E+ + G++ N VT+  +I   C   ++ +A ++   M+  G  P+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +YN LI    KA NM+ A  +++ +  +G+K + +   T +  LC  +K++ A +++N
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + + Y TL+  YF+       L L DEMKE  I  +  T+  +I GL ++ 
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591

Query: 305 KTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              +A+D  N +    G+  +   F  +I G C + QVE A     +MV+K   PD    
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ G  ++G + +AL         G  +D + Y +L+  L    +L+ A   L EM  
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           + + PD     ++     E G ++EA +  S +++     HQ++  +
Sbjct: 712 EGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK-----HQLLTSD 753



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 227/480 (47%), Gaps = 23/480 (4%)

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T+N  +P    ++ L +   + GMLEEA +   +M+  ++ P   + N L++RF + G++
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +  +   ++   G +P   T+NIMI   CKEG ++ A  +   M+  G  PD VTYN++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID   K G +++     + M     + + IT N +++  C   KL             G 
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + VSY TL+  + ++    +A+K + +M+   ++P+ +TY ++I    + G    A  
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + NE+LQ G+  +  T+  +I G C   ++++A +   KM      P++ + N L+ G  
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483

Query: 372 REGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           +   +++AL+      LKG+ +  D + Y T I  LC   ++E A  +++EM+E  +  +
Sbjct: 484 KAKNMDRALELLNE--LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIM----VETGKINHQVVQPNTSK---TPEEID--- 479
              Y  +  A  +SG   E       M    +E   +   V+     K     + +D   
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601

Query: 480 ---------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                     ++  ++  I+  C   + + A  +FE+  QKG+  +++ Y +LM+G  K+
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 36/389 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G  P+ V+Y+T++DA  K+G + +      DM++ GLVPN  TY  L+   CK+G 
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A R+ + M Q     +V TY  LI+G C+A  ++EA  L  +M++  ++P++ +YN 
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++     A +L++EL   GIKP+ + +   I   C   KI+ A  ++  M+E G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK-------------------------- 214
              + + Y TL+DA  K+GN  E   ++D M                             
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 215 ----------GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
                     GL+ N      ++  LC + +++ A  L     ++G   D  +Y +L+ G
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            F+      AL L D+M E  +      Y +++WGLS   + ++A   L E++  G+ PD
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           E    +++      G +++A++  + +++
Sbjct: 718 EVLCISVLKKHYELGCIDEAVELQSYLMK 746



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 165/359 (45%), Gaps = 21/359 (5%)

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           RN+   GF      ++ LID     G +EEA +    M R  +   T + N +LH     
Sbjct: 185 RNVCVPGFGVFDALFSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K D+           G      +Y  +I    ++     A  L++EMK R ++P T TY
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N+MI G  + G+ +  +    E+      PD  T+N +I+ FC  G++   L+F+ +M  
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              KP++V+ + L+   C+EG++++A+KF+      G   +  TY +LI + CK   L D
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           AF L +EM +  +  +  TY A+   L ++ R++EA++        GK++   V PN + 
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF------GKMDTAGVIPNLA- 473

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                     SY+  I+          AL++  E + +GI  +   Y   + GL    K
Sbjct: 474 ----------SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 150/304 (49%), Gaps = 18/304 (5%)

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           L+EA    +   +   +    S   L+  + +  K +   + + +M      P+ FTYN 
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           MI  + + G  E A  +  E+   G++PD  T+N++I GF   G+++  + F  +M +  
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +PD++T N L++  C+ G L   L+F+R     G   + V+Y+TL+ + CKE  ++ A 
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
               +M    L P+ YTY ++  A  + G L +A +  + M++ G               
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG--------------- 432

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             ++ + ++Y+  I+  C   R K+A ++F +    G+  N ++Y  L++G +K  K++ 
Sbjct: 433 --VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK-AKNMD 489

Query: 536 KAVD 539
           +A++
Sbjct: 490 RALE 493


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 267/525 (50%), Gaps = 24/525 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD  T+  +L  L +  +L + R LL  MK+ G VP+   YN L+SGY K     +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           + +  M +N  LP V TY  +++G C AG  ++A +L  EM      P++ TYN ++   
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            E  +  EA K+++E+   G  P+ VT+N  IK  CK  ++D+A K +  M     +PD 
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDV 182

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V+Y T+I+  CK+G+++ A RM+D M  +G   + +T ++++   C   +++ A  LL+S
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K G   + V+Y +L+    R     +A  +  EM+ R   P   +YNA I GL ++ +
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A  + + +++ G  P+ ++++ ++   C + +++ A+    +  EK    DI+   +
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           LL GLC+ G  ++A   F S +L  K    D   YN ++ S CK R+++ A  +  +M E
Sbjct: 363 LLDGLCKGGRFDEACALF-SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +    +  T+  +   L    RL +A+     MV+ G I                 P  +
Sbjct: 422 RNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFI-----------------PDFV 463

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           +Y   ++  C  G+   AL++FEE  + G   +  TY  L+ GL+
Sbjct: 464 TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 508



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 271/549 (49%), Gaps = 16/549 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC+PD+  YN ++    K     +    L++M K   +P   TY  +V G CK G 
Sbjct: 36  MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGR 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+A++++D M      P+++TYN+++ G C    L+EA ++ +EM      PDVVTYN+
Sbjct: 96  TKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I    +  R  EA K +  +    + P+ V++  +I   CK G +D A +++  M   G
Sbjct: 156 FIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG 212

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY++LID  CK G +E A  ++D M + G + N +  N++L  L     + +A 
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 272

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    +RG+  D VSY   I G  + E+  +A  ++D M ER   P+  +Y+ ++  L
Sbjct: 273 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEEL 332

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPD 359
            +  + + AI ++ +  +   I D   +  ++ G C  G+ ++A    +K++ EK  +PD
Sbjct: 333 CKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 392

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +   N++L   C+   ++KAL+  +  +L+    + VT+N L+  LC + RL DA  +L 
Sbjct: 393 VFFYNVMLDSHCKRRQIDKALQIHKQ-MLERNCCNVVTWNILVHGLCVDDRLSDAETMLL 451

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN--TSKTPEE 477
            M ++   PD  TY  +  A+ + G+   A +     V+ G +   V      T    E 
Sbjct: 452 TMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHEN 511

Query: 478 IDPSSISYSEKIN---------EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           +   +     K++          +   G     L++F E  +  +  N  T+   ++G +
Sbjct: 512 MAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKL 571

Query: 529 KRRKSISKA 537
            + +S+ KA
Sbjct: 572 VKAESLGKA 580



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 235/512 (45%), Gaps = 67/512 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TYN I++ L ++ KL+E + +L +M  +G  P+  TYN  + G CK   + EA
Sbjct: 110 GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA 169

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +  M      PDV +Y  +ING C +G L+ A R+  +M +    PDVVTY++LI+ 
Sbjct: 170 RKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDG 226

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G    A  L+D + + G +PN V +N ++    + G I KA  ++  ME  GF+PD
Sbjct: 227 FCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPD 286

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YN  ID  CKA  +++A  + D M  +G   N  + + ++  LC +K+LD+A  L+ 
Sbjct: 287 VVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVE 346

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM-PSTFTYNAMI------ 297
            A ++   +D + Y  L+ G  +  + + A  L+ ++ + +I  P  F YN M+      
Sbjct: 347 QAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR 406

Query: 298 -----------------------W-----GLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
                                  W     GL    +   A  ML  ++  G IPD  T+ 
Sbjct: 407 RQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 466

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA---------- 379
           T++   C  G+   AL+   + V+    PD+VT + L++GL  E + E+A          
Sbjct: 467 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVA 526

Query: 380 ------------------LKFFRSWILKGKAVDSVTYNTLISS-LCKERRLEDAFGLLSE 420
                             LK F   I      ++ T+   IS  L K   L  A GL   
Sbjct: 527 LWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDR 586

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             +    PD +    +     + G LEEA++ 
Sbjct: 587 AVKGGFFPDLFVANTLIDVFAKCGDLEEARRI 618



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 208/426 (48%), Gaps = 20/426 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD  T+  L+     S +  +A +L+  + E G  P+   +N +I  Y K     +A K 
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  M +N   P  VTY  ++D  CKAG  ++A +++D M  KG   N  T N I+  LC 
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           E+KLDEA  +L   + RGY+ D V+Y + I G  + ++ + A K    M    + P   +
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVS 184

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  +I GL +SG  + A  ML+++   G  PD  T++++I GFC  G+VE+A+   + M+
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           +   +P++V  N LL  L R G + KA         +G   D V+YN  I  LCK  R++
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  +   M E+   P+  +Y+ +   L +   L++A      +VE  +  +Q+V     
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDA----ITLVEQAREKYQIVD---- 356

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                     + Y+  ++  C  GR+ +A  +F +   + I      + N+M     +R+
Sbjct: 357 ---------ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 407

Query: 533 SISKAV 538
            I KA+
Sbjct: 408 QIDKAL 413



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 43/387 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ V YN++L AL + G + +  D+L +M+++G  P+  +YN  + G CK   
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A  V D M +    P+  +Y+ML+   C    L++A  L ++      + D++ Y  
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 121 LINRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           L++   + GR  EA  L  + LDE   +P+   +N+M+  +CK  +IDKA +I + M E 
Sbjct: 363 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER 422

Query: 180 ----------------------------------GFSPDCVTYNTLIDANCKAGNMEEAF 205
                                             GF PD VTY TL+DA CK G    A 
Sbjct: 423 NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAAL 482

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + +   + G   + +T + ++  L  E   +EAY+L          LD   +  +I GY
Sbjct: 483 ELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK-------LDVALWNAMILGY 535

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG-LSQSGKTEQAIDMLNELLQSGMIPD 324
             +   +  LKL+ E+ E  + P+  T+   I G L ++    +A  + +  ++ G  PD
Sbjct: 536 AENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPD 595

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKM 351
               NT+I  F   G +E+A +    M
Sbjct: 596 LFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 162/337 (48%), Gaps = 21/337 (6%)

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           K  + +  T   +L  LC   +L++A  LL    + G   D+  Y  LI+GY + +   +
Sbjct: 4   KSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQ 63

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A K   EM +   +P+  TY  ++ GL ++G+T+ A+ +L+E+   G  P+  T+N I+ 
Sbjct: 64  AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C E ++++A +   +M  + + PD+VT N  + GLC+   +++A KF     +     
Sbjct: 124 GLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TP 180

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V+Y T+I+ LCK   L+ A  +L +M  +   PD  TY+++     + G +E A    
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 454 SIMVETG----------------KINHQVVQPNTSKTPEE--IDPSSISYSEKINEHCSQ 495
             M++ G                ++ H     +     E     P  +SY+  I+  C  
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            R K A  +F+   ++G   N S+Y  L+  L K+++
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKE 337



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 20/249 (8%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M ++   P  FT+  ++ GL +S + E+A  +L  + + G +PD+  +N +I G+     
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
             +A +F  +MV+    P +VT   ++ GLC+ G  + A+K       KG + +  TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++  LC+ER+L++A  +L EM  +   PD  TY +    L +  R++EA+KF + M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---- 176

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            + P  +SY+  IN  C  G    A ++ ++   +G   +  TY
Sbjct: 177 ----------------PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTY 220

Query: 521 MNLMNGLIK 529
            +L++G  K
Sbjct: 221 SSLIDGFCK 229



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 142/347 (40%), Gaps = 64/347 (18%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD V+YN  +D L K  ++ + + +   M ++G  PN ++Y++LV   CK   
Sbjct: 278 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKE 337

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDV---- 115
           L +A+ +V+   +   + D+  Y +L++G C  G  +EA  L  ++   K+  PDV    
Sbjct: 338 LDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 397

Query: 116 ------------------------------VTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                                         VT+N L++      R  +A  ++  + + G
Sbjct: 398 VMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEG 457

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA- 204
             P+ VT+  ++   CK GK   A ++     + G  PD VTY+ LI         EEA 
Sbjct: 458 FIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY 517

Query: 205 --FRMMDVM--------------GRKGLKM-----------NTITLNT-ILHTLCCEKKL 236
             F  +DV               G  GLK+           N  T    I   L   + L
Sbjct: 518 LLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESL 577

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
            +A  L + A K G++ D     TLI  + +      A +++  MK+
Sbjct: 578 GKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 222/383 (57%), Gaps = 3/383 (0%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M + K  P++ T+N +ING C  G L +A  +  +M+     P+VVTYNTLI+ + + GR
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 131 SMEAFK---LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             + +K   ++ E+ E+ + PN+VT N++I  +CK+  +  A K+   M+  G  P  VT
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+L++  C  G + EA  ++D M    LK N IT N +++  C +K L+EA  L ++  
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K+G   + +++ TL+ GY +  K   A  L   M E+  +P+  TYN +I G  + GK E
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +  ++LNE+   G+  D  T+N +I  +C + + +KA +  ++M++K  KP  +T NILL
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +G C EG L  AL   +    +G+  + VTYN LI   C++ +LEDA GLL+EM EK L 
Sbjct: 521 NGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLI 580

Query: 428 PDRYTYAAIHTALVESGRLEEAQ 450
           P+R TY  I   ++E G L + +
Sbjct: 581 PNRTTYEIIKEEMMEKGFLPDIE 603



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/372 (36%), Positives = 217/372 (58%), Gaps = 3/372 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW---LKEA 64
           P+ +T+NT+++ L K GKLN+  D++ DMK  G  PN  TYN L+ GYCK+G    + +A
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +NK  P+  T+N+LI+G+C    L  A ++ +EM+S  L P VVTYN+L+N 
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  EA  L+DE+    +KPN +T+N +I  YCK+  +++A ++  N+ + G +P+
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+NTL+   CK G MEEAF +  VM  KG   N  T N ++   C E K++E   LLN
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG   D V+Y  LI+ +   ++  +A +L DEM ++ + PS  TYN ++ G    G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A+++  ++ + G   +  T+N +I G+C +G++E A    N+M+EK   P+  T  
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 365 ILLSGLCREGIL 376
           I+   +  +G L
Sbjct: 588 IIKEEMMEKGFL 599



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/363 (35%), Positives = 198/363 (54%), Gaps = 19/363 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKK---GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           M+ +G  P+ VTYNT++D   K    GK+ +   +L +M +  + PN  T+N+L+ G+CK
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              L  A++V + M      P V TYN L+NG CN G L EA  L  EM S  L P+V+T
Sbjct: 316 DENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN LIN + +     EA +L D + + G+ PN +T N ++  YCK GK+++A  + + M 
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E GF P+  TYN LI   C+ G MEE   +++ M  +G+K +T+T N ++   C +K+  
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  L++    +G     ++Y  L+ GY  +     AL L  +M++     +  TYN +I
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLI 555

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  + GK E A  +LNE+L+ G+IP+ TT+  I                  +M+EK F 
Sbjct: 556 QGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII----------------KEEMMEKGFL 599

Query: 358 PDI 360
           PDI
Sbjct: 600 PDI 602



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 194/384 (50%), Gaps = 20/384 (5%)

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK-- 197
           E+    I PN +T N +I   CK GK++KA  +V +M+  GF P+ VTYNTLID  CK  
Sbjct: 220 EMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMG 279

Query: 198 -AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
             G M +A  ++  M    +  N++T N ++   C ++ L  A  +      +G     V
Sbjct: 280 RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV 339

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y +L+ G   + K N A  L DEM    + P+  TYNA+I G  +    E+A ++ + +
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            + G+ P+  TFNT++HG+C  G++E+A      M+EK F P+  T N L+ G CREG +
Sbjct: 400 GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           E+          +G   D+VTYN LIS+ C+++  + A  L+ EM +K L P   TY  +
Sbjct: 460 EEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNIL 519

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                  G L  A      M + G+                   + ++Y+  I  +C +G
Sbjct: 520 LNGYCMEGNLRAALNLRKQMEKEGRW-----------------ANVVTYNVLIQGYCRKG 562

Query: 497 RYKDALQIFEETRQKGIAINKSTY 520
           + +DA  +  E  +KG+  N++TY
Sbjct: 563 KLEDANGLLNEMLEKGLIPNRTTY 586



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 217/420 (51%), Gaps = 20/420 (4%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           +  + L+  + E+ +++   +      ++  K + ++ N ++    KE +      + + 
Sbjct: 161 IIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKE 220

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M     SP+ +T+NT+I+  CK G + +A  ++D M   G   N +T NT++   C   +
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 236 LDEAY---MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           + + Y    +L    +     + V++  LI G+ +DE  + ALK+++EM+ + + P+  T
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN+++ GL   GK  +A  +L+E+L S + P+  T+N +I+G+C +  +E+A +  + + 
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++   P+++T N LL G C+ G +E+A    +  + KG   ++ TYN LI   C+E ++E
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +   LL+EM+ + +  D  TY  + +A  E    ++A +    M++ G            
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG------------ 508

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                + PS ++Y+  +N +C +G  + AL + ++  ++G   N  TY  L+ G  ++ K
Sbjct: 509 -----LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGK 563



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 6/209 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +T+NT+L    K GK+ E   L   M ++G +PN +TYN L+ G+C+ G ++E 
Sbjct: 403 GLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEV 462

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M       D  TYN+LI+ WC     ++A RL  EM    L P  +TYN L+N 
Sbjct: 463 KNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG 522

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G    A  L  ++++ G   N VT+N++I+ YC++GK++ A  ++  M E G  P+
Sbjct: 523 YCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN 582

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
             TY  +     K   ME+ F + D+ G 
Sbjct: 583 RTTYEII-----KEEMMEKGF-LPDIEGH 605


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/458 (32%), Positives = 242/458 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   + V+YN IL  L + GK+ E   LL  M+ +G VP+  +Y+++V GYC++  L + 
Sbjct: 247 GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKV 306

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ + +    P+ +TYN +I+  C  G + EA ++ + M++ ++ PD V Y TLI+ 
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +SG     +KL DE+    I P+ VT+  MI   C+ GK+ +A K+   M   G  PD
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD 426

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  LID  CKAG M+EAF + + M  KGL  N +T   ++  LC   ++D A  LL+
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH 486

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S++G   +  +Y  LI G  +     +A+KL +EM      P T TY  ++    + G
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A ++L  +L  G+ P   TFN +++GFC  G +E   +    M++K   P+  T N
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+   C    +   ++ ++    +G   D+ TYN LI   CK R +++A+ L  EM EK
Sbjct: 607 SLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK 666

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
                  +Y ++     +  + EEA+K    M   G I
Sbjct: 667 GFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFI 704



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 244/447 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +PD V+Y+ I+D   +  +L +V  L+ +++++GL PN+ TYN ++S  CK G 
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGR 337

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +V+ +M   +  PD   Y  LI+G+  +G +   ++L  EM+  K++PD VTY +
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS 397

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++G+ +EA KL  E+   G+KP+ VT+  +I  YCK G++ +A  +   M E G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY  L+D  CK G ++ A  ++  M  KGL+ N  T N +++ LC    +++A 
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+      G++ D ++Y T++  Y +  +  +A +L   M ++ + P+  T+N ++ G 
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG  E    ++  +L  G++P+ TTFN+++  +C    +   ++ +  M  +   PD 
Sbjct: 578 CMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDT 637

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NIL+ G C+   +++A    +  + KG ++ + +YN+LI    K ++ E+A  L  E
Sbjct: 638 NTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEE 697

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLE 447
           M       ++  Y        E G  E
Sbjct: 698 MRTHGFIAEKEIYDIFVDVNYEEGNWE 724



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 235/444 (52%), Gaps = 18/444 (4%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME-AFKLIDE 140
            +++       AG+L EA +L  ++ +  +L  V + N  + R   S   +  AF++  E
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFRE 242

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
             E G+  N V++NI++   C+ GK+ +A  ++  ME  G  PD V+Y+ ++D  C+   
Sbjct: 243 YSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQ 302

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           + +  ++M+ + RKGLK N  T N+I+  LC   ++ EA  +L     +  + D V Y T
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI+G+ +    +   KL+DEMK ++I+P   TY +MI GL Q+GK  +A  + +E+L  G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + PDE T+  +I G+C  G++++A   HN+MVEK   P++VT   L+ GLC+ G ++ A 
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +       KG   +  TYN LI+ LCK   +E A  L+ EM+     PD  TY  I  A 
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G + +A +   IM++ G                 + P+ ++++  +N  C  G  +D
Sbjct: 543 CKMGEMAKAHELLRIMLDKG-----------------LQPTIVTFNVLMNGFCMSGMLED 585

Query: 501 ALQIFEETRQKGIAINKSTYMNLM 524
             ++ +    KGI  N +T+ +LM
Sbjct: 586 GERLIKWMLDKGIMPNATTFNSLM 609



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 247/481 (51%), Gaps = 17/481 (3%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G+  N  +YNI++   C+LG +KEA  ++  M    ++PDV +Y+++++G+C    L + 
Sbjct: 247 GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKV 306

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            +L +E++   L P+  TYN++I+   ++GR +EA +++  +    I P+ V +  +I  
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           + K G +    K+   M+     PD VTY ++I   C+AG + EA ++   M  KGLK +
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD 426

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T   ++   C   ++ EA+ L N   ++G   + V+Y  L+ G  +  + + A +L  
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH 486

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM E+ + P+  TYNA+I GL + G  EQA+ ++ E+  +G  PD  T+ TI+  +C  G
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           ++ KA +    M++K  +P IVT N+L++G C  G+LE   +  +  + KG   ++ T+N
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           +L+   C    +     +   M  + + PD  TY  +     ++  ++EA      MVE 
Sbjct: 607 SLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK 666

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                    ++ SY+  I     + ++++A ++FEE R  G    K  
Sbjct: 667 G-----------------FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEI 709

Query: 520 Y 520
           Y
Sbjct: 710 Y 710



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 170/318 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY  ++D   K G++ E   L + M ++GL PN  TY  LV G CK G +  A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M++    P+V TYN LING C  G +E+A +L +EM+     PD +TY T+++ 
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G   +A +L+  + + G++P  VT N+++  +C  G ++   ++++ M + G  P+
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N+L+   C   NM     +   M  +G+  +T T N ++   C  + + EA+ L  
Sbjct: 602 ATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHK 661

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G+ L   SY +LI G+++ +K   A KL++EM+    +     Y+  +    + G
Sbjct: 662 EMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEG 721

Query: 305 KTEQAIDMLNELLQSGMI 322
             E  +++ +E ++  ++
Sbjct: 722 NWENTLELCDEAIEKCLV 739



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 151/286 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY  ++D L K G+++   +LL +M ++GL PN  TYN L++G CK+G +++A
Sbjct: 457 GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA 516

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M      PD  TY  +++ +C  G + +A  L + M    L P +VT+N L+N 
Sbjct: 517 VKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 576

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SG   +  +LI  + + GI PNA T N ++K YC    +    +I + M   G  PD
Sbjct: 577 FCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI  +CKA NM+EA+ +   M  KG  +   + N+++      KK +EA  L  
Sbjct: 637 TNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFE 696

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
                G+  ++  Y   +   + +      L+L DE  E+ ++  T
Sbjct: 697 EMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT 742



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 21/258 (8%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A +++ E  E  +  +T +YN ++  L Q GK ++A  +L ++   G +PD  +++ I+ 
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G+C   Q+ K L+   ++  K  KP+  T N ++S LC+ G + +A +  R  ++K + +
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLR--VMKNQRI 353

Query: 394 --DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D+V Y TLIS   K   +   + L  EM+ KK+ PD  TY ++   L ++G++ EA+K
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARK 413

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             S M+  G                 + P  ++Y+  I+ +C  G  K+A  +  +  +K
Sbjct: 414 LFSEMLSKG-----------------LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK 456

Query: 512 GIAINKSTYMNLMNGLIK 529
           G+  N  TY  L++GL K
Sbjct: 457 GLTPNVVTYTALVDGLCK 474



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 109/209 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD +TY TI+DA  K G++ +  +LL  M  +GL P   T+N+L++G+C  G 
Sbjct: 523 MDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGM 582

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++  R++  M     +P+  T+N L+  +C    +     + K M +  ++PD  TYN 
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNI 642

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++    EA+ L  E+ E G    A ++N +IK + K  K ++A K+   M  +G
Sbjct: 643 LIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           F  +   Y+  +D N + GN E    + D
Sbjct: 703 FIAEKEIYDIFVDVNYEEGNWENTLELCD 731



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 117/264 (44%), Gaps = 24/264 (9%)

Query: 278 WDEMKERQIM------PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +D   ER I            ++     L ++G   +A  + ++LL  G++    + N  
Sbjct: 163 FDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLF 222

Query: 332 IHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +     S   +  A +   +  E     + V+ NI+L  LC+ G +++A         +G
Sbjct: 223 LARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRG 282

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D V+Y+ ++   C+  +L     L+ E++ K L P++YTY +I + L ++GR+ EA+
Sbjct: 283 NVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAE 342

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +   +M                   + I P ++ Y+  I+     G      ++F+E ++
Sbjct: 343 QVLRVM-----------------KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR 385

Query: 511 KGIAINKSTYMNLMNGLIKRRKSI 534
           K I  +  TY ++++GL +  K +
Sbjct: 386 KKIVPDFVTYTSMIHGLCQAGKVV 409


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 257/526 (48%), Gaps = 17/526 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD    N IL  L  K  L +  ++   M + G+ P  TTYN ++  +CK G ++ A+ 
Sbjct: 199 LPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALD 258

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +V  M +    P   T+N+LING    G L++A  L +EM    L     TYN LI  + 
Sbjct: 259 LVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYC 318

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G  +EA  L +E+   G+ P   +HN ++  +CKEGK+  A + + +M +    PD +
Sbjct: 319 KKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDII 378

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +YNTLI   C+ GN+ EAF ++D +  + L  N +T NT++  LC    L+ A  L    
Sbjct: 379 SYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDM 438

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             RG + D V+Y  L+ G  +      A + +DEM    + P  F Y A I G  + G T
Sbjct: 439 INRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDT 498

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +  E+L  G  PD  T+N  ++G C  G +E+A +   KM+     PD VT    
Sbjct: 499 AKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSF 558

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +      G L +  + F   + +G+    VTY  LI +     RL+ A     EM+EK +
Sbjct: 559 MHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGV 618

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+  TY  +     +  ++++A KF   M E G                 I P+  +Y+
Sbjct: 619 VPNVITYNVLINGFCKVRKMDQACKFFIEMQEKG-----------------IFPNKYTYT 661

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             INE+C+ G++++AL+++ +   K I  +  T+  L+  L K  K
Sbjct: 662 ILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYK 707



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 224/457 (49%), Gaps = 35/457 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P  VT+N +++ L KKG+L + + L+ +M K GL  +  TYN L+ GYCK G 
Sbjct: 263 MQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGL 322

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ + + M      P V ++N ++ G+C  G + +A +   +M    L+PD+++YNT
Sbjct: 323 LVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNT 382

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G   EAF L+DEL    +  N VT+N +I   C+ G ++ A K+  +M   G
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG 442

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY  L++  CK GNM  A    D M   GL                        
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAP---------------------- 480

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                        D+ +Y   I G  +     +A KL +EM  +   P   TYN  + GL
Sbjct: 481 -------------DQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A ++L ++++ G +PD  T+ + +H     G + +  +    M+ +   P +
Sbjct: 528 CKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTV 587

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L+      G L+ A+ +F     KG   + +TYN LI+  CK R+++ A     E
Sbjct: 588 VTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIE 647

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           M+EK + P++YTY  +       G+ +EA +  + M+
Sbjct: 648 MQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQML 684



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 236/484 (48%), Gaps = 21/484 (4%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           ++L+ GY       + + V + M +N+ LPDV   N ++    +  +L +A  + + M  
Sbjct: 175 DVLIGGYLNY----QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGE 230

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + P V TYNT+++ F + G    A  L+ ++ E G  P+ VT N++I    K+G++ +
Sbjct: 231 YGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQ 290

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  +++ M + G      TYN LI   CK G + EA  + + M  +G+     + NTI++
Sbjct: 291 AKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMY 350

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C E K+ +A   L+   K+    D +SY TLI G+ R      A  L DE++ R +  
Sbjct: 351 GFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSF 410

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN +I GL + G  E A+ +  +++  G+ PD  T+  +++G C  G +  A +F 
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFF 470

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M+     PD       + G  + G   KA K     + KG   D +TYN  ++ LCK 
Sbjct: 471 DEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKL 530

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
             LE+A  LL +M      PD  TY +   A +E+G L E ++    M+  G+       
Sbjct: 531 GNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQ------- 583

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P+ ++Y+  I+ H   GR   A+  F E ++KG+  N  TY  L+NG  
Sbjct: 584 ----------TPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFC 633

Query: 529 KRRK 532
           K RK
Sbjct: 634 KVRK 637



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 216/395 (54%), Gaps = 4/395 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   ++NTI+    K+GK+++ R  LSDM K+ L+P+  +YN L+ G+C+LG + EA
Sbjct: 337 GVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEA 396

Query: 65  MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             ++D L  +N S  ++ TYN LI+G C  G LE A +L+++M +  + PDVVTY  L+N
Sbjct: 397 FILLDELRFRNLSF-NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G  + A +  DE+   G+ P+   +   I    K G   KA K+   M   GF P
Sbjct: 456 GACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPP 515

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TYN  ++  CK GN+EEA  ++  M R G   + +T  + +H       L E   + 
Sbjct: 516 DVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF 575

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                RG     V+Y  LI  +  + + + A+  + EM+E+ ++P+  TYN +I G  + 
Sbjct: 576 YDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKV 635

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K +QA     E+ + G+ P++ T+  +I+  C+ G+ ++AL+ + +M+ K  +PD  T 
Sbjct: 636 RKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTH 695

Query: 364 NILLSGLCREGILEKALKFFRSWILKG-KAVDSVT 397
             LL  L ++  ++ A++F  S IL G + +D+ T
Sbjct: 696 GALLKKLDKDYKVQ-AVQFIESLILDGDRTIDANT 729


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 240/450 (53%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + ++ ++ A  +  K NE  +    +K++G VPN  T N ++S + KL   + A  +   
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +      ++T+N++IN  C  G L++A      ME+L + P+VVTYNT+I+     G+
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  +   + + G++P+  T+N  I   CKEG++++A  ++  M E G  P+ VTYN 
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNA 326

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  C  G++++A+   D M  KG+  + +T N  +H L  E ++ +A  ++    ++G
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V++  LI GY R   A RA  L DEM  + I P+  TY ++I+ L +  + ++A 
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + +++ Q G++PD   FN +I G C+ G +++A Q   +M      PD +T N L+ G 
Sbjct: 447 ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CREG +E+A +       +G   D ++YNTLIS   K   ++DAF +  EM      P  
Sbjct: 507 CREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTI 566

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            TY A+   L ++   E A++    MV  G
Sbjct: 567 LTYNALIQGLCKNQEGEHAEELLKEMVSKG 596



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 221/395 (55%), Gaps = 2/395 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +++ L K+GKL + ++ +  M+  G+ PN  TYN ++ G+C  G  + A RV+   
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA-RVIFQT 276

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
            ++K L PD +TYN  I+G C  G LEEA  L  +M    L+P+ VTYN LI+ +   G 
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A+   DE+   GI  + VT+N+ I     EG++  A  +++ M E G  PD VT+N 
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  C+ G+ + AF ++D M  KG++   +T  ++++ L    ++ EA  L +   + G
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D + +  LI G+  +   +RA +L  EM   +++P   TYN ++ G  + GK E+A 
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+E+ + G+ PD  ++NT+I G+   G ++ A +  ++M+   F P I+T N L+ GL
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGL 576

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           C+    E A +  +  + KG   D  TY ++I ++
Sbjct: 577 CKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 194/359 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYNTI+     +GK    R +   MK +GL P+  TYN  +SG CK G 
Sbjct: 242 METLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGR 301

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  ++  M +   +P+  TYN LI+G+CN G L++A+  R EM S  ++  +VTYN 
Sbjct: 302 LEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNL 361

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I+  F  GR  +A  +I E+ E G+ P+AVTHNI+I  YC+ G   +A  ++  M   G
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTY +LI    K   M+EA  +   + ++GL  + I  N ++   C    +D A+
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF 481

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL          DE++Y TL+ GY R+ K   A +L DEMK R I P   +YN +I G 
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           S+ G  + A  + +E++ +G  P   T+N +I G C   + E A +   +MV K   PD
Sbjct: 542 SKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 244/480 (50%), Gaps = 17/480 (3%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           +++LV  YC+L    EA+    L+ +   +P++ T N +++ +      + A+ L  EM 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
            + +   + T+N +IN   + G+  +A + I  ++  G+KPN VT+N +I  +C  GK  
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A  I + M++ G  PDC TYN+ I   CK G +EEA  ++  M   GL  N +T N ++
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
              C +  LD+AY   +    +G     V+Y   I   F + +   A  +  EM+E+ +M
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P   T+N +I G  + G  ++A  +L+E++  G+ P   T+ ++I+      ++++A   
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            +K+ ++   PDI+  N L+ G C  G +++A +  +         D +TYNTL+   C+
Sbjct: 449 FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCR 508

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           E ++E+A  LL EM+ + + PD  +Y  + +   + G +++A +    M+ TG       
Sbjct: 509 EGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG------- 561

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                      DP+ ++Y+  I   C     + A ++ +E   KGI  + STY++++  +
Sbjct: 562 ----------FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 186/332 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  TYN+ +  L K+G+L E   L+  M + GLVPN  TYN L+ GYC  G 
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A    D M     +  + TYN+ I+     G + +A  + KEM    ++PD VT+N 
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +   G +  AF L+DE+   GI+P  VT+  +I    K  ++ +A  +   +++ G
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD + +N LID +C  GN++ AF+++  M    +  + IT NT++   C E K++EA 
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   +RG   D +SY TLI+GY +      A ++ DEM      P+  TYNA+I GL
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGL 576

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            ++ + E A ++L E++  G+ PD++T+ +II
Sbjct: 577 CKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 219/450 (48%), Gaps = 17/450 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           +++L+  +C      EA      ++    +P++ T N +++ F +  R+  A+ L  E+ 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
              I+ +  T NIMI   CKEGK+ KA + + +ME  G  P+ VTYNT+I  +C  G  +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  +   M  KGL+ +  T N+ +  LC E +L+EA  L+    + G   + V+Y  LI
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            GY      ++A    DEM  + IM S  TYN  I  L   G+   A +M+ E+ + GM+
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T N +I+G+C  G  ++A    ++MV K  +P +VT   L+  L +   +++A   
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F     +G   D + +N LI   C    ++ AF LL EM+  K+ PD  TY  +      
Sbjct: 449 FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCR 508

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++EEA++    M   G                 I P  ISY+  I+ +  +G  KDA 
Sbjct: 509 EGKVEEARQLLDEMKRRG-----------------IKPDHISYNTLISGYSKRGDMKDAF 551

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++ +E    G      TY  L+ GL K ++
Sbjct: 552 RVRDEMMTTGFDPTILTYNALIQGLCKNQE 581



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 225/452 (49%), Gaps = 32/452 (7%)

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT---HNIM 156
           +RL     S+ L+  ++   T  NR            + DEL     + +A T    +++
Sbjct: 104 YRLPSPKPSINLIQRLILSPTCTNR-----------TIFDELALARDRVDAKTTLIFDLL 152

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           ++ YC+  K ++A +    ++E GF P+  T N ++    K    + A+ +   M R  +
Sbjct: 153 VRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNI 212

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + +  T N +++ LC E KL +A   +      G   + V+Y T+I G+    K  RA  
Sbjct: 213 RSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARV 272

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           ++  MK++ + P  +TYN+ I GL + G+ E+A  ++ ++L+ G++P+  T+N +I G+C
Sbjct: 273 IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYC 332

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           ++G ++KA  + ++M+ K     +VT N+ +  L  EG +  A    +    KG   D+V
Sbjct: 333 NKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAV 392

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS-- 454
           T+N LI+  C+    + AFGLL EM  K + P   TY ++   L +  R++EA    S  
Sbjct: 393 THNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKI 452

Query: 455 --------IMVETGKINHQVVQPNTSKTPE---EID-----PSSISYSEKINEHCSQGRY 498
                   I+V    I+      N  +  +   E+D     P  I+Y+  +  +C +G+ 
Sbjct: 453 QQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           ++A Q+ +E +++GI  +  +Y  L++G  KR
Sbjct: 513 EEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 115/194 (59%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P  VTY +++  L K+ ++ E   L S ++++GL+P+   +N L+ G+C  G 
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A +++  M   K LPD  TYN L+ G+C  G +EEA +L  EM+   + PD ++YNT
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G   +AF++ DE+   G  P  +T+N +I+  CK  + + A ++++ M   G
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596

Query: 181 FSPDCVTYNTLIDA 194
            +PD  TY ++I+A
Sbjct: 597 ITPDDSTYLSIIEA 610


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/579 (27%), Positives = 263/579 (45%), Gaps = 72/579 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   T+N ++     +G +     LL  M + G+VPN  +YNIL+ G+C  GW
Sbjct: 210 MAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGW 269

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A ++ + M ++   P V TYN+L++  C+ G + EA RL  EM  + +  + +T+N 
Sbjct: 270 SRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNV 329

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI------------------------- 155
           LI+ + ++GR  +A     E+   G+ P++ T NI                         
Sbjct: 330 LIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHM 389

Query: 156 -------MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
                  ++   C + ++D A +++R   E G       +N LI A  K G  EEAF + 
Sbjct: 390 LADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELY 449

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
            +M + GL  ++ T N ++  LC + +LDEA +LL     +GY L   S+   +   FR+
Sbjct: 450 RIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL-STSFTICLDASFRE 508

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
             A  ALK WD+M +  + P    ++A I GL +     +A     E+   G++P+  T+
Sbjct: 509 GNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTY 568

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N+II   C  G + +AL+    M +    PDI T NIL+ GLCREG LE           
Sbjct: 569 NSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCS 628

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D+VTYNT+I++ C+ + +  A   +++M      PD +TY     +L  +  L +
Sbjct: 629 NGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQ 688

Query: 449 AQK----------------------------FTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           A K                                M+ TG++     QPNT         
Sbjct: 689 AGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRAMILTGRLIKMAFQPNT--------- 739

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             I+ +  ++  C QG  K AL   E+ R+     + +T
Sbjct: 740 --ITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDAT 776



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 250/541 (46%), Gaps = 54/541 (9%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           F+ G+++   ++  +M  +G  P+  T+N ++ G+C  G ++ A  ++ +M +   +P+V
Sbjct: 195 FRSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNV 254

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
            +YN+LI G C  G   +AF+L +EM      P VVTYN L++     GR  EA +L DE
Sbjct: 255 CSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDE 314

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + + GI+ N +T N++I  Y K G++D+AC   R M+  G  PD  T+N +     K G+
Sbjct: 315 MAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGH 374

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
             +     D+ G     M    ++ ++  LC + +LD+A+ LL  A ++G  L    +  
Sbjct: 375 AAQLVHDHDMFGS---HMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNA 431

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS- 319
           LI  Y ++     A +L+  M +  + PS+ T+N +I GL   G+ ++A  +L  ++   
Sbjct: 432 LIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 491

Query: 320 ---------------------------------GMIPDETTFNTIIHGFCSEGQVEKALQ 346
                                            G+ PD   F+  I+G C    V +A Q
Sbjct: 492 YCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQ 551

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              +M  +   P+  T N ++S LCR G + +ALK  ++    G   D  T N LI  LC
Sbjct: 552 AFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLC 611

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +E +LE    LL +M    L PD  TY  I  A   +  +  A  F + M+  G      
Sbjct: 612 REGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAG------ 665

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                       +P   +Y+  ++  CS      A ++ +E    G   +  TY  LM+G
Sbjct: 666 -----------CEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDG 714

Query: 527 L 527
           +
Sbjct: 715 I 715



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 211/445 (47%), Gaps = 37/445 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKG--------------------------------KLNE 28
           M+  G +PD+ T+N I    +K G                                +L++
Sbjct: 350 MKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDD 409

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
             +LL    +QG   + T +N L++ Y K G  +EA  +  +M +    P   T+N LI 
Sbjct: 410 AWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIM 469

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G CN G L+EA  L + M S K      ++   ++  F  G ++ A K  D++ + G++P
Sbjct: 470 GLCNQGRLDEAQLLLEHMVS-KGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQP 528

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           + +  +  I   C+   +++A +    M   G  P+  TYN++I A C+AGNM EA ++ 
Sbjct: 529 DFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQ 588

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M + GL  +  T N ++  LC E KL+    LL      G   D V+Y T+I  Y R 
Sbjct: 589 QNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRA 648

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +  N A+   ++M      P  FTYN  +  L  +    QA  +L+EL+  G  PD  T+
Sbjct: 649 KDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTY 708

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           NT++ G CS+  +++A+    ++++ +F+P+ +T N+ LS  C++G  ++AL +      
Sbjct: 709 NTLMDGICSD-VLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLRE 767

Query: 389 KGKAVDSVTYNTLISSLCKERRLED 413
                D  T N +  +    R LED
Sbjct: 768 DSFVFDDATRNIIDWA---RRELED 789



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/552 (23%), Positives = 222/552 (40%), Gaps = 86/552 (15%)

Query: 45  RTTYNIL---VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           R  Y  L   +  +   G   EA+ V+  + ++   P +     L+     +G +  A+ 
Sbjct: 146 RARYGALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWN 205

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           + +EM +    P + T+N +I  F   G    A  L+  + E GI PN  ++NI+IK +C
Sbjct: 206 VFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHC 265

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
             G    A K+   M  +G  P  VTYN L+D  C  G M EA R+ D M + G++ NTI
Sbjct: 266 VFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTI 325

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR-------------- 267
           T N ++       ++D+A         RG   D  ++  +  G ++              
Sbjct: 326 TFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMF 385

Query: 268 ------------------DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
                             D + + A +L     E+    S   +NA+I   S+ G  E+A
Sbjct: 386 GSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEA 445

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF------------- 356
            ++   + + G+ P  +TFN +I G C++G++++A      MV K +             
Sbjct: 446 FELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAS 505

Query: 357 ---------------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                                +PD +  +  ++GLCR   + +A + F     +G   ++
Sbjct: 506 FREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNN 565

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            TYN++IS+LC+   + +A  L   M +  L PD YT   +   L   G+LE        
Sbjct: 566 FTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLD 625

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M   G                 + P +++Y+  IN +C       A+    +    G   
Sbjct: 626 MCSNG-----------------LTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEP 668

Query: 516 NKSTYMNLMNGL 527
           +  TY   M+ L
Sbjct: 669 DIFTYNIWMHSL 680



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 204/447 (45%), Gaps = 25/447 (5%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           + ++ +  AGM  EA  +   +      P +     L+   F SG    A+ + +E+   
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G +P+  T N MI  +C  G +  A  ++  M E G  P+  +YN LI  +C  G   +A
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDA 273

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           F++ + M R G +   +T N ++  LC E ++ EA  L +  ++ G   + +++  LI G
Sbjct: 274 FKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDG 333

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           Y +  + ++A   + EMK R ++P + T+N +  G  + G   Q +   +++  S M+ D
Sbjct: 334 YAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHD-HDMFGSHMLAD 392

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
               + ++   C + +++ A +     +E+     +   N L++   +EG+ E+A + +R
Sbjct: 393 --GMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYR 450

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G A  S T+N LI  LC + RL++A  LL  M  K      Y  +   T  +++ 
Sbjct: 451 IMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG-----YCLSTSFTICLDAS 505

Query: 445 RLEEAQKFTSIMV--ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
              E     ++    + GK+  Q              P  I++S  IN  C      +A 
Sbjct: 506 -FREGNAVCALKCWDDMGKLGLQ--------------PDFIAFSAYINGLCRLDYVNEAY 550

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
           Q F E   +GI  N  TY ++++ L +
Sbjct: 551 QAFAEMTARGIVPNNFTYNSIISALCR 577


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 231/436 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  P+  T N ++++     +L     +L+ + K G  PN  T+N L+ G C  G 
Sbjct: 85  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E + + D M      P+V TY  LING C  G    A RL + ME     PDVV Y +
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  +AF L  E+   GI P+  T+N +I   C   +      ++  M  + 
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V ++T++DA CK G + EA  ++D+M ++G++ N +T N ++   C   ++DEA 
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 324

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++   +G+  D VSY TLI GY + ++  +A+ L++EM  ++++P+T TY+ ++ GL
Sbjct: 325 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 384

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G IPD  ++  ++   C   ++++A+     +   +  PDI
Sbjct: 385 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 444

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
               I++ G+CR G LE A   F +   KG   +  TY  +I+ LC++  L +A  L  E
Sbjct: 445 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504

Query: 421 MEEKKLGPDRYTYAAI 436
           M+ K   P+  TY  I
Sbjct: 505 MKRKGYSPNGCTYNLI 520



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 242/479 (50%), Gaps = 24/479 (5%)

Query: 61  LKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           +K    V+ L  Q  S    P+++T N+LIN +C+   L  AF +  ++  L   P++ T
Sbjct: 72  MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 131

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +NTLI      G+  E   L D++   G +PN VT+  +I   CK G    A +++R+ME
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 191

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKK 235
           +    PD V Y ++ID+ CK   + +AF +   M  +G+  +  T N+++H LC  CE K
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
              A  LLN         + V + T++    ++ K   A  + D M +R + P+  TYNA
Sbjct: 252 HVTA--LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 309

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++ G     + ++A+ + + ++  G  PD  +++T+I+G+C   ++EKA+    +M  K 
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 369

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P+ VT + L+ GLC  G L+ A+  F   + +G+  D V+Y  L+  LCK RRL++A 
Sbjct: 370 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 429

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL  +E   + PD   Y  +   +  +G LE A+   S +   G               
Sbjct: 430 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG--------------- 474

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             + P+  +Y+  IN  C QG   +A ++F E ++KG + N  TY  +  G ++  +++
Sbjct: 475 --LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 531



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 222/451 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P+  T+NT++  L  +GK+ EV  L   M  +G  PN  TY  L++G CK+G    
Sbjct: 123 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 182

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    PDV  Y  +I+  C    + +AF L  EM    + P + TYN+LI+
Sbjct: 183 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 242

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++E+    I PN V  + ++   CKEGK+ +A  +V  M + G  P
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN L+D +C    M+EA ++ D M  KG   + ++ +T+++  C  +++++A  L 
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++    + V+Y TL+ G     +   A+ L+ EM  R  +P   +Y  ++  L ++
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + ++AI +L  +  S M PD   +  +I G C  G++E A    + +  K   P++ T 
Sbjct: 423 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 482

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            I+++GLC++G+L +A K F     KG + +  TYN +     +         LL EM  
Sbjct: 483 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 542

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +    D  T   +   L + G  +  ++  S
Sbjct: 543 RGFSADVSTSTVLVEMLSDDGLDQSVKQILS 573



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 225/476 (47%), Gaps = 21/476 (4%)

Query: 76  SLPDVW---TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           SLP  +   ++N   +   N   L++A      M  +   P +  +  L+    +     
Sbjct: 17  SLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYS 76

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
               L  ++D  GI PN  T NI+I  +C   ++  A  ++  + + G  P+  T+NTLI
Sbjct: 77  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 136

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C  G + E   + D M  +G + N +T  T+++ LC       A  LL S  +    
Sbjct: 137 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ 196

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D V Y ++I    +D +  +A  L+ EM  + I PS FTYN++I  L    + +    +
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 256

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE++ S ++P+   F+T++   C EG+V +A    + M+++  +P++VT N L+ G C 
Sbjct: 257 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 316

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              +++A+K F + + KG A D V+Y+TLI+  CK +R+E A  L  EM  K+L P+  T
Sbjct: 317 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 376

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKIN------------------HQVVQPNTSKT 474
           Y+ +   L   GRL++A      MV  G+I                    + +    +  
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 436

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              +DP    Y+  I+  C  G  + A  +F     KG+  N  TY  ++NGL ++
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQ 492



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 170/312 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V ++T++DAL K+GK+ E  D++  M K+G+ PN  TYN L+ G+C    + EA++
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M      PDV +Y+ LING+C    +E+A  L +EM   +L+P+ VTY+TL++   
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L  E+   G  P+ V++ I++ + CK  ++D+A  +++ +E +   PD  
Sbjct: 386 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 445

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y  +ID  C+AG +E A  +   +  KGL  N  T   +++ LC +  L EA  L    
Sbjct: 446 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++GY  +  +Y  +  G+ R+ +  R ++L  EM  R       T   ++  LS  G  
Sbjct: 506 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 565

Query: 307 EQAIDMLNELLQ 318
           +    +L+E LQ
Sbjct: 566 QSVKQILSEFLQ 577



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 174/374 (46%), Gaps = 35/374 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-- 58
           ME   C PD V Y +I+D+L K  ++ +  +L S+M  QG+ P+  TYN L+   C L  
Sbjct: 190 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 249

Query: 59  ---------------------------------GWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                            G + EA  VVD+M +    P+V TYN 
Sbjct: 250 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 309

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L++G C    ++EA ++   M      PDVV+Y+TLIN + +  R  +A  L +E+    
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 369

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN VT++ ++   C  G++  A  +   M   G  PD V+Y  L+D  CK   ++EA 
Sbjct: 370 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 429

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  +    +  +      ++  +C   +L+ A  L ++ S +G + +  +Y  +I G 
Sbjct: 430 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +      A KL+ EMK +   P+  TYN +  G  ++ +T + I +L E+L  G   D 
Sbjct: 490 CQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 549

Query: 326 TTFNTIIHGFCSEG 339
           +T   ++     +G
Sbjct: 550 STSTVLVEMLSDDG 563


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 228/453 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    +N IL +L        V  L    +  G+ P+  T +IL++ +C    +  A  V
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              + +    P+  T N LI G C  G +++A     ++ +     D V+Y TLIN   +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G +    +L+ +L+ H +KP+ V +N +I   CK   +  AC +   M   G SPD VT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLI   C  G+++EAF +++ M  K +  N  T N ++  L  E K+ EA +LL    
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K     D  +Y +LI GYF  ++   A  ++  M +R + P    Y  MI GL ++   +
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+    MIPD  T+N++I G C    +E+A+    +M E+  +PD+ +  ILL
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G LE A + F+  + KG  ++   Y  LI+ LCK    ++A  L S+ME+K   
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           PD  T+  I  AL E    ++A+K    M+  G
Sbjct: 475 PDAVTFDIIIRALFEKDENDKAEKILREMIARG 507



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 227/467 (48%), Gaps = 17/467 (3%)

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+   +LM   +  P  + +N +++   N         L K+ E   + PD+ T + LIN
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F        AF +   + + G  PNA+T N +IK  C  G+I KA      +   GF  
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V+Y TLI+  CK G  +   R++  +    +K + +  NTI+++LC  K L +A  + 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    +G   D V+Y TLI G+        A  L +EMK + I P+  T+N +I  LS+ 
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK ++A  +L  ++++ + PD  T+N++I G+    +V+ A      M ++   PD+   
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             +++GLC+  ++++A+  F     K    D VTYN+LI  LCK   LE A  L   M+E
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + + PD Y+Y  +   L +SGRLE+A++    ++  G   H  V                
Sbjct: 401 QGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGY--HLNVH--------------- 443

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +Y+  IN  C  G + +AL +  +   KG   +  T+  ++  L ++
Sbjct: 444 AYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEK 490



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 218/422 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T + +++    +  +     + +++ K+G  PN  T N L+ G C  G +K+A
Sbjct: 87  GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA 146

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   D +       D  +Y  LING C  G  +   RL +++E   + PDVV YNT+IN 
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINS 206

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    +A  +  E+   GI P+ VT+  +I  +C  G + +A  ++  M+    +P+
Sbjct: 207 LCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN 266

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LIDA  K G M+EA  ++ VM +  +K +  T N+++       ++  A  +  
Sbjct: 267 VCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFY 326

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S ++RG   D   Y  +I G  + +  + A+ L++EMK + ++P   TYN++I GL ++ 
Sbjct: 327 SMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNH 386

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+AI +   + + G+ PD  ++  ++ G C  G++E A +   +++ K +  ++    
Sbjct: 387 HLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYT 446

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++ LC+ G  ++AL        KG   D+VT++ +I +L ++   + A  +L EM  +
Sbjct: 447 VLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIAR 506

Query: 425 KL 426
            L
Sbjct: 507 GL 508



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 169/322 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG    PD V YNTI+++L K   L +  D+ S+M  +G+ P+  TY  L+ G+C +G 
Sbjct: 188 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGH 247

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA  +++ M      P+V T+N+LI+     G ++EA  L   M    + PDV TYN+
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNS 307

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +F       A  +   + + G+ P+   +  MI   CK   +D+A  +   M+   
Sbjct: 308 LIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKN 367

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN+LID  CK  ++E A  +   M  +G++ +  +   +L  LC   +L++A 
Sbjct: 368 MIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAK 427

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +GY+L+  +Y  LI    +    + AL L  +M+++  MP   T++ +I  L
Sbjct: 428 EIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRAL 487

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
            +  + ++A  +L E++  G++
Sbjct: 488 FEKDENDKAEKILREMIARGLL 509



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 17/312 (5%)

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           T   N IL +L   K       L       G   D  +   LI  +        A  ++ 
Sbjct: 57  TFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 116

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            + +R   P+  T N +I GL   G+ ++A+   ++L+  G   D+ ++ T+I+G C  G
Sbjct: 117 NILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG 176

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           + +   +   K+   S KPD+V  N +++ LC+  +L  A   +   I+KG + D VTY 
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           TLI   C    L++AF LL+EM+ K + P+  T+  +  AL + G+++EA+   ++M++ 
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                             I P   +Y+  I+ +      K A  +F    Q+G+  +   
Sbjct: 297 C-----------------IKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339

Query: 520 YMNLMNGLIKRR 531
           Y N++NGL K +
Sbjct: 340 YTNMINGLCKTK 351



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 17/245 (6%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P TF +N ++  L  +      I +  +   +G+ PD  T + +I+ FC +  +  A   
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              ++++ F P+ +T N L+ GLC  G ++KAL F    + +G  +D V+Y TLI+ LCK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
               +    LL ++E   + PD   Y  I  +L ++  L +A    S M+  G       
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG------- 227

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     I P  ++Y+  I+  C  G  K+A  +  E + K I  N  T+  L++ L
Sbjct: 228 ----------ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDAL 277

Query: 528 IKRRK 532
            K  K
Sbjct: 278 SKEGK 282


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 231/436 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  P+  T N ++++     +L     +L+ + K G  PN  T+N L+ G C  G 
Sbjct: 94  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E + + D M      P+V TY  LING C  G    A RL + ME     PDVV Y +
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  +AF L  E+   GI P+  T+N +I   C   +      ++  M  + 
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V ++T++DA CK G + EA  ++D+M ++G++ N +T N ++   C   ++DEA 
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 333

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++   +G+  D VSY TLI GY + ++  +A+ L++EM  ++++P+T TY+ ++ GL
Sbjct: 334 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 393

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G IPD  ++  ++   C   ++++A+     +   +  PDI
Sbjct: 394 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 453

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
               I++ G+CR G LE A   F +   KG   +  TY  +I+ LC++  L +A  L  E
Sbjct: 454 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513

Query: 421 MEEKKLGPDRYTYAAI 436
           M+ K   P+  TY  I
Sbjct: 514 MKRKGYSPNGCTYNLI 529



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 242/479 (50%), Gaps = 24/479 (5%)

Query: 61  LKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           +K    V+ L  Q  S    P+++T N+LIN +C+   L  AF +  ++  L   P++ T
Sbjct: 81  MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 140

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +NTLI      G+  E   L D++   G +PN VT+  +I   CK G    A +++R+ME
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 200

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKK 235
           +    PD V Y ++ID+ CK   + +AF +   M  +G+  +  T N+++H LC  CE K
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
              A  LLN         + V + T++    ++ K   A  + D M +R + P+  TYNA
Sbjct: 261 HVTA--LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 318

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++ G     + ++A+ + + ++  G  PD  +++T+I+G+C   ++EKA+    +M  K 
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 378

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P+ VT + L+ GLC  G L+ A+  F   + +G+  D V+Y  L+  LCK RRL++A 
Sbjct: 379 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 438

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL  +E   + PD   Y  +   +  +G LE A+   S +   G               
Sbjct: 439 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG--------------- 483

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             + P+  +Y+  IN  C QG   +A ++F E ++KG + N  TY  +  G ++  +++
Sbjct: 484 --LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 540



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 222/451 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P+  T+NT++  L  +GK+ EV  L   M  +G  PN  TY  L++G CK+G    
Sbjct: 132 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 191

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    PDV  Y  +I+  C    + +AF L  EM    + P + TYN+LI+
Sbjct: 192 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 251

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++E+    I PN V  + ++   CKEGK+ +A  +V  M + G  P
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN L+D +C    M+EA ++ D M  KG   + ++ +T+++  C  +++++A  L 
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++    + V+Y TL+ G     +   A+ L+ EM  R  +P   +Y  ++  L ++
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + ++AI +L  +  S M PD   +  +I G C  G++E A    + +  K   P++ T 
Sbjct: 432 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 491

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            I+++GLC++G+L +A K F     KG + +  TYN +     +         LL EM  
Sbjct: 492 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 551

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +    D  T   +   L + G  +  ++  S
Sbjct: 552 RGFSADVSTSTVLVEMLSDDGLDQSVKQILS 582



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 225/476 (47%), Gaps = 21/476 (4%)

Query: 76  SLPDVW---TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           SLP  +   ++N   +   N   L++A      M  +   P +  +  L+    +     
Sbjct: 26  SLPPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYS 85

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
               L  ++D  GI PN  T NI+I  +C   ++  A  ++  + + G  P+  T+NTLI
Sbjct: 86  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 145

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C  G + E   + D M  +G + N +T  T+++ LC       A  LL S  +    
Sbjct: 146 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ 205

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D V Y ++I    +D +  +A  L+ EM  + I PS FTYN++I  L    + +    +
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 265

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE++ S ++P+   F+T++   C EG+V +A    + M+++  +P++VT N L+ G C 
Sbjct: 266 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 325

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              +++A+K F + + KG A D V+Y+TLI+  CK +R+E A  L  EM  K+L P+  T
Sbjct: 326 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 385

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQV------------------VQPNTSKT 474
           Y+ +   L   GRL++A      MV  G+I   V                  +    +  
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 445

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              +DP    Y+  I+  C  G  + A  +F     KG+  N  TY  ++NGL ++
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQ 501



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 170/312 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V ++T++DAL K+GK+ E  D++  M K+G+ PN  TYN L+ G+C    + EA++
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M      PDV +Y+ LING+C    +E+A  L +EM   +L+P+ VTY+TL++   
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L  E+   G  P+ V++ I++ + CK  ++D+A  +++ +E +   PD  
Sbjct: 395 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 454

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y  +ID  C+AG +E A  +   +  KGL  N  T   +++ LC +  L EA  L    
Sbjct: 455 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++GY  +  +Y  +  G+ R+ +  R ++L  EM  R       T   ++  LS  G  
Sbjct: 515 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 574

Query: 307 EQAIDMLNELLQ 318
           +    +L+E LQ
Sbjct: 575 QSVKQILSEFLQ 586



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 174/374 (46%), Gaps = 35/374 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-- 58
           ME   C PD V Y +I+D+L K  ++ +  +L S+M  QG+ P+  TYN L+   C L  
Sbjct: 199 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 258

Query: 59  ---------------------------------GWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                            G + EA  VVD+M +    P+V TYN 
Sbjct: 259 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 318

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L++G C    ++EA ++   M      PDVV+Y+TLIN + +  R  +A  L +E+    
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 378

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN VT++ ++   C  G++  A  +   M   G  PD V+Y  L+D  CK   ++EA 
Sbjct: 379 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 438

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  +    +  +      ++  +C   +L+ A  L ++ S +G + +  +Y  +I G 
Sbjct: 439 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +      A KL+ EMK +   P+  TYN +  G  ++ +T + I +L E+L  G   D 
Sbjct: 499 CQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 558

Query: 326 TTFNTIIHGFCSEG 339
           +T   ++     +G
Sbjct: 559 STSTVLVEMLSDDG 572


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/449 (33%), Positives = 234/449 (52%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G   +  +YN I+ +L + GK+ E   LL  M  +   P+  +Y+ ++ GYC LG LK+
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKK 311

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++D M      P+ +TYN +I   C  G   EA ++ +EM S K++PD V Y TLI+
Sbjct: 312 ALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIH 371

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G    A K  DE+    I P+ +T+  +I+ + + GK+ +   +   M   G  P
Sbjct: 372 GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY TLID  CKAG M  AF + + M + G+  N +T   ++  LC   +LD A  LL
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   K+G  L+   Y +++ G  +     +A+KL  EM+   I P   TY  +I    + 
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A  +L E+L  G+ P   TFN +++GFC  G +E   +    M+EK   PD +T 
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+   C    +    K ++    +G A DS TYN LI   CK R L++A+ L  EM E
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           K   P   +Y A+     +  +  EA++ 
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEAREL 700



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 229/440 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V+Y+T++D     G+L +   L+ DM+ +GL PNR TYN ++   CK+G   EA +V
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M   K +PD   Y  LI+G+   G +  A +   EM S K+ PD +TY TLI  F +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+ +E   L  E+   G+KP+ VT+  +I  YCK G++  A  +   M + G +P+ VT
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  CK G ++ A  ++D M +KGL++N    N++++ +C    +++A  L+    
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D ++Y T+I  Y R    ++A KL  EM +R + P+  T+N ++ G    G  E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+ G++PD  T+NT++   C    +    + + +M  +   PD  T NIL+
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   L++A   ++  I KG      +YN LI    K+R+  +A  L  EM    L 
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710

Query: 428 PDRYTYAAIHTALVESGRLE 447
            D   Y        E G +E
Sbjct: 711 ADGEIYNFFVDMCYEEGDVE 730



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 267/547 (48%), Gaps = 52/547 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP------------------------ 43
           P+ + ++     L + G L+E R LL  +   GLV                         
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 44  ---------NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
                    N T+YNI++   C+LG +KEA R++  M    S PDV +Y+ +I+G+C+ G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
            L++A +L  +M+   L P+  TYN++I    + G+S EA K++ E+    I P+ V + 
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            +I  + K G +  A K    M     SPD +TY TLI    + G + E   +   M  +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           GLK + +T  T++   C   ++  A+ L N   + G   + V+YG LI G  +  + + A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            +L DEM+++ +  +   YN+M+ G+ ++G  EQAI ++ E+  +G+ PD  T+ T+I  
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL-KGKAV 393
           +C  G ++KA +   +M+++  +P +VT N+L++G C  G+LE   +    W+L KG   
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL-GWMLEKGIVP 606

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D++TYNTL+   C    +     +   M  + + PD  TY  +     ++  L+EA    
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M+E G +                 P+  SY+  I     + ++ +A ++FEE R  G+
Sbjct: 667 KEMIEKGYV-----------------PTVTSYNALIKRFYKKRKFXEARELFEEMRGHGL 709

Query: 514 AINKSTY 520
             +   Y
Sbjct: 710 VADGEIY 716



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 235/473 (49%), Gaps = 22/473 (4%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+   +++        G L EA +L  ++ S  L+  V + N  ++R   +   +E    
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEM--A 245

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           I    E+GI  N  ++NI+I   C+ GK+ +A +++  M+    +PD V+Y+T+ID  C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A ++MD M  KGLK N  T N+I+  LC   K  EA  +L     +    D V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI G+F+      A K +DEM  ++I P   TY  +I G  Q GK  +  ++ +E++
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+ PDE T+ T+I  +C  G++  A   HN+MV+    P+IVT   L+ GLC+ G L+
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A +       KG  ++   YN++++ +CK   +E A  L+ EME   + PD  TY  + 
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT-------------------PEEI 478
            A    G +++A K    M++ G +   VV  N                        + I
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRG-LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            P +I+Y+  + +HC +       +I++  R +G+A + +TY  L+ G  K R
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 191/374 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PDNV Y T++   FK G +        +M  + + P+  TY  L+ G+ + G + E   
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M      PD  TY  LI+ +C AG +  AF L  EM  + + P++VTY  LI+   
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G    A +L+DE+ + G++ N   +N M+   CK G I++A K+++ ME  G  PD +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY T+IDA C+ G++++A +++  M  +GL+   +T N +++  C    L++   LL   
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++G   D ++Y TL+  +      N   K++  M+ + + P + TYN +I G  ++   
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  +  E+++ G +P  T++N +I  F  + +  +A +   +M       D    N  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719

Query: 367 LSGLCREGILEKAL 380
           +     EG +E  L
Sbjct: 720 VDMCYEEGDVEITL 733



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 169/318 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY T++D   K G++     L ++M + G+ PN  TY  L+ G CK G L  A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D M +     +V  YN ++NG C AG +E+A +L KEME   + PD +TY T+I+ 
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A KL+ E+ + G++P  VT N+++  +C  G ++   +++  M E G  PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTL+  +C   +M    ++   M  +G+  ++ T N ++   C  + L EA+ L  
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++GY     SY  LI  +++  K   A +L++EM+   ++     YN  +    + G
Sbjct: 668 EMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727

Query: 305 KTEQAIDMLNELLQSGMI 322
             E  +++ +E ++  ++
Sbjct: 728 DVEITLNLCDEAIEKCLL 745



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 149/287 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY  ++D L K G+L+   +LL +M+K+GL  N   YN +V+G CK G 
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A++++  M      PD  TY  +I+ +C  G +++A +L +EM    L P VVT+N 
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N F   G   +  +L+  + E GI P+A+T+N ++K +C    ++   KI + M   G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  TYN LI  +CKA N++EA+ +   M  KG      + N ++     ++K  EA 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            L       G   D   Y   +   + +      L L DE  E+ ++
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 19/349 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ + ++       + G++ EA +++D +   GL +   + N  L  +    +  E  
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE-- 243

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           M +    + G   +  SY  +I    R  K   A +L  +M  R   P   +Y+ +I G 
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ ++A+ +++++   G+ P+  T+N+II   C  G+  +A +   +M+ +   PD 
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+ G  + G +  A K+F   + K  + D +TY TLI    +  ++ +   L  E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L PD  TY  +     ++G +  A    + MV+ G                 + P
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG-----------------MTP 466

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + ++Y   I+  C  G    A ++ +E R+KG+ +N   Y +++NG+ K
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 58/214 (27%)

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR--EGILEKAL 380
           P+   F+         G + +A +  +K++       + +CN  LS +    EGI E A+
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGI-EMAI 246

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           K F  +   G + ++ +YN +I SLC+  ++++A  LL +M+ +                
Sbjct: 247 KVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR---------------- 287

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
                                          S TP+      +SYS  I+ +C  G  K 
Sbjct: 288 -------------------------------SSTPD-----VVSYSTVIDGYCHLGELKK 311

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           AL++ ++ + KG+  N+ TY +++  L K  KS 
Sbjct: 312 ALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSF 345


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/449 (33%), Positives = 235/449 (52%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G   +  +YN I+ +L + GK+ E   LL  M  +   P+  +Y+ ++ GYC LG LK+
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKK 311

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++D M      P+ +TYN +I   C  G   EA ++ +EM S K++PD V Y TLI+
Sbjct: 312 ALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIH 371

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G    A K  DE+    I P+ +T+  +I+ + + GK+ +   +   M   G  P
Sbjct: 372 GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY TLID  CKAG M  AF + + M + G+  N +T   ++  LC   +LD A  LL
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   K+G  L+   Y +++ G  +     +A+KL  EM+   I P   TY  +I    + 
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A  +L E+L  G+ P   TFN +++GFC  G +E   +    M+EK   PD +T 
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+   C    +    K ++    +G A DS TYN LI   CK R L++A+ L  EM E
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           K   P   +Y A+     +  ++ EA++ 
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEAREL 700



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/440 (32%), Positives = 230/440 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V+Y+T++D     G+L +   L+ DM+ +GL PNR TYN ++   CK+G   EA +V
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M   K +PD   Y  LI+G+   G +  A +   EM S K+ PD +TY TLI  F +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+ +E   L  E+   G+KP+ VT+  +I  YCK G++  A  +   M + G +P+ VT
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  CK G ++ A  ++D M +KGL++N    N++++ +C    +++A  L+    
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D ++Y T+I  Y R    ++A KL  EM +R + P+  T+N ++ G    G  E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+ G++PD  T+NT++   C    +    + + +M  +   PD  T NIL+
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   L++A   ++  I KG      +YN LI    K++++ +A  L  EM    L 
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710

Query: 428 PDRYTYAAIHTALVESGRLE 447
            D   Y        E G +E
Sbjct: 711 ADGEIYNFFVDMCYEEGDVE 730



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 266/547 (48%), Gaps = 52/547 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP------------------------ 43
           P+ + ++     L + G L+E R LL  +   GLV                         
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 44  ---------NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
                    N T+YNI++   C+LG +KEA R++  M    S PDV +Y+ +I+G+C+ G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
            L++A +L  +M+   L P+  TYN++I    + G+S EA K++ E+    I P+ V + 
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            +I  + K G +  A K    M     SPD +TY TLI    + G + E   +   M  +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           GLK + +T  T++   C   ++  A+ L N   + G   + V+YG LI G  +  + + A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            +L DEM+++ +  +   YN+M+ G+ ++G  EQAI ++ E+  +G+ PD  T+ T+I  
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL-KGKAV 393
           +C  G ++KA +   +M+++  +P +VT N+L++G C  G+LE   +    W+L KG   
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL-GWMLEKGIVP 606

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D++TYNTL+   C    +     +   M  + + PD  TY  +     ++  L+EA    
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M+E G +                 P+  SY+  I     + +  +A ++FEE R  G+
Sbjct: 667 KEMIEKGYV-----------------PTVTSYNALIKRFYKKKKILEARELFEEMRGHGL 709

Query: 514 AINKSTY 520
             +   Y
Sbjct: 710 VADGEIY 716



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 235/473 (49%), Gaps = 22/473 (4%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+   +++        G L EA +L  ++ S  L+  V + N  ++R   +   +E    
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEM--A 245

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           I    E+GI  N  ++NI+I   C+ GK+ +A +++  M+    +PD V+Y+T+ID  C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A ++MD M  KGLK N  T N+I+  LC   K  EA  +L     +    D V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI G+F+      A K +DEM  ++I P   TY  +I G  Q GK  +  ++ +E++
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+ PDE T+ T+I  +C  G++  A   HN+MV+    P+IVT   L+ GLC+ G L+
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A +       KG  ++   YN++++ +CK   +E A  L+ EME   + PD  TY  + 
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT-------------------PEEI 478
            A    G +++A K    M++ G +   VV  N                        + I
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRG-LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            P +I+Y+  + +HC +       +I++  R +G+A + +TY  L+ G  K R
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 192/374 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PDNV Y T++   FK G +        +M  + + P+  TY  L+ G+ + G + E   
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M      PD  TY  LI+ +C AG +  AF L  EM  + + P++VTY  LI+   
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G    A +L+DE+ + G++ N   +N M+   CK G I++A K+++ ME  G  PD +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY T+IDA C+ G++++A +++  M  +GL+   +T N +++  C    L++   LL   
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++G   D ++Y TL+  +      N   K++  M+ + + P + TYN +I G  ++   
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  +  E+++ G +P  T++N +I  F  + ++ +A +   +M       D    N  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719

Query: 367 LSGLCREGILEKAL 380
           +     EG +E  L
Sbjct: 720 VDMCYEEGDVEITL 733



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 170/318 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY T++D   K G++     L ++M + G+ PN  TY  L+ G CK G L  A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D M +     +V  YN ++NG C AG +E+A +L KEME   + PD +TY T+I+ 
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A KL+ E+ + G++P  VT N+++  +C  G ++   +++  M E G  PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTL+  +C   +M    ++   M  +G+  ++ T N ++   C  + L EA+ L  
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++GY     SY  LI  +++ +K   A +L++EM+   ++     YN  +    + G
Sbjct: 668 EMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727

Query: 305 KTEQAIDMLNELLQSGMI 322
             E  +++ +E ++  ++
Sbjct: 728 DVEITLNLCDEAIEKCLL 745



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 150/287 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY  ++D L K G+L+   +LL +M+K+GL  N   YN +V+G CK G 
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A++++  M      PD  TY  +I+ +C  G +++A +L +EM    L P VVT+N 
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N F   G   +  +L+  + E GI P+A+T+N ++K +C    ++   KI + M   G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  TYN LI  +CKA N++EA+ +   M  KG      + N ++     +KK+ EA 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            L       G   D   Y   +   + +      L L DE  E+ ++
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 19/349 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ + ++       + G++ EA +++D +   GL +   + N  L  +    +  E  
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE-- 243

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           M +    + G   +  SY  +I    R  K   A +L  +M  R   P   +Y+ +I G 
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ ++A+ +++++   G+ P+  T+N+II   C  G+  +A +   +M+ +   PD 
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+ G  + G +  A K+F   + K  + D +TY TLI    +  ++ +   L  E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L PD  TY  +     ++G +  A    + MV+ G                 + P
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG-----------------MTP 466

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + ++Y   I+  C  G    A ++ +E R+KG+ +N   Y +++NG+ K
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 58/213 (27%)

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR--EGILEKAL 380
           P+   F+         G + +A +  +K++       + +CN  LS +    EGI E A+
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGI-EMAI 246

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           K F  +   G + ++ +YN +I SLC+  ++++A  LL +M+ +                
Sbjct: 247 KVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR---------------- 287

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
                                          S TP+      +SYS  I+ +C  G  K 
Sbjct: 288 -------------------------------SSTPD-----VVSYSTVIDGYCHLGELKK 311

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           AL++ ++ + KG+  N+ TY +++  L K  KS
Sbjct: 312 ALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKS 344


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 215/396 (54%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +++ L K+GKL + +D +  M+  G+ PN  TYN +V GYC  G ++ A  ++  M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  PD +TY  LI+G C  G LEEA ++ +EM    L P  V YNTLI+ F   G  
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A    DE+ + GI P   T+N +I     E + D+A  +++ ++E G SPD +TYN L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  C+  N ++AF + D M   G+K    T  ++LH L  + ++ EA  L    +  G 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D + +  LI G+  +     A +L  +M   ++ P   T+N ++ G  + GK E+A +
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +E+ + G+ PD  +FNT+I G+   G ++ A +  N+M++  F P ++T N L+ GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           +    + A +  +  + KG   D  TY TLI  + K
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 239/451 (52%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           ++ ++ ++ +     + +E  +    MK++G++P   T N L+S + KL   + A  +  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M + +    V+T+N++IN  C  G L++A      ME+  + P++VTYNT+++ +  SG
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R   A  ++  +    I+P++ T+  +I   CK+G++++A KI   M + G  P  V YN
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLID  C  GN++ A    D M +KG+     T N+++H L  E++ DEA  ++    ++
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D ++Y  LI GY R   A +A  L DEM    I P+  TY +++  LS+  + ++A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            D+  ++   G++PD   FN +I G CS   V+ A +    M      PD VT N ++ G
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            CREG +E+A + F     +G   D +++NTLIS   +   ++DAF + +EM +    P 
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             TY A+   L ++   + A++    MV  G
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 196/375 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYNTI+      G++     +L+ MK+Q + P+  TY  L+SG CK G 
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA ++ + M Q    P    YN LI+G+CN G L+ A   + EM    + P + TYN+
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  F   R+ EA  +I E+ E GI P+A+T+NI+I  YC+     KA  +   M  +G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY +L+    K   M+EA  +   +  +G+  + I  N ++   C    +  A+
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAF 486

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +     DEV++ T++ G+ R+ K   A +L+DEMK R I P   ++N +I G 
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G  + A  + NE+L +G  P   T+N ++ G C   + + A +   +MV K   PD 
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606

Query: 361 VTCNILLSGLCREGI 375
            T   L+ G+ +  I
Sbjct: 607 TTYFTLIEGIAKVNI 621



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 225/450 (50%), Gaps = 17/450 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           ++ LI   C+    +EAF     M+   +LP + T N+L++ F +  R+  A+ L  E+ 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
              IK +  T NIMI   CKEGK+ KA   V +ME +G  P+ VTYNT++   C +G +E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  ++  M R+ ++ ++ T  +++  +C + +L+EA  +     ++G     V Y TLI
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+      + A    DEM ++ I P+  TYN++I  L    +T++A  M+ E+ + G+ 
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+N +I+G+C     +KA   H++M+    KP   T   LL  L ++  +++A   
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F+    +G   D++ +N LI   C    ++ AF LL +M+  K+ PD  T+  I      
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++EEA++    M   G                 I P  IS++  I+ +  +G  KDA 
Sbjct: 514 EGKVEEARELFDEMKRRG-----------------IKPDHISFNTLISGYSRRGDIKDAF 556

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++  E    G      TY  L+ GL K ++
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 203/407 (49%), Gaps = 19/407 (4%)

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           D  G K +++  + +IK  C   + D+A +    M+E G  P   T N+L+    K    
Sbjct: 144 DRLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E A+ +   M R  +K +  T N +++ LC E KL +A   +      G   + V+Y T+
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           + GY    +   A  +   MK ++I P +FTY ++I G+ + G+ E+A  +  E++Q G+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P    +NT+I GFC++G ++ A  + ++M++K   P + T N L+  L  E   ++A  
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             +    KG + D++TYN LI+  C+    + AF L  EM    + P + TY ++   L 
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442

Query: 442 ESGRLEEA----QKFTS------IMVETGKINHQVVQPNTSKTPE--------EIDPSSI 483
           +  R++EA    +K TS       ++    I+      N     E        ++ P  +
Sbjct: 443 KKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV 502

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +++  +  HC +G+ ++A ++F+E +++GI  +  ++  L++G  +R
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRR 549



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 158/320 (49%), Gaps = 18/320 (5%)

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           R G K ++I  + ++ + C   + DEA+    +  ++G      +  +L++ + +  +  
Sbjct: 145 RLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTE 203

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  L+ EM   +I  S +T+N MI  L + GK ++A D +  +  SG+ P+  T+NTI+
Sbjct: 204 AAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG+CS G+VE A      M  +  +PD  T   L+SG+C++G LE+A K F   + KG  
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLR 323

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             +V YNTLI   C +  L+ A     EM +K + P   TY ++  AL    R +EA+  
Sbjct: 324 PSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECM 383

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              + E G                 I P +I+Y+  IN +C     K A  + +E    G
Sbjct: 384 IKEIQEKG-----------------ISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 513 IAINKSTYMNLMNGLIKRRK 532
           I   K TY +L++ L K+ +
Sbjct: 427 IKPTKKTYTSLLHVLSKKNR 446



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 110/203 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   TY ++L  L KK ++ E  DL   +  +G++P+   +N L+ G+C    
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSN 481

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K A  ++  M + K  PD  T+N ++ G C  G +EEA  L  EM+   + PD +++NT
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +   G   +AF++ +E+ + G  P  +T+N +++  CK  + D A ++++ M   G
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601

Query: 181 FSPDCVTYNTLIDANCKAGNMEE 203
            +PD  TY TLI+   K    +E
Sbjct: 602 MTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 17/252 (6%)

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           ++R    S+  ++ +I       + ++A +    + + G++P   T N+++  F    + 
Sbjct: 143 RDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E A   + +M     K  + T NI+++ LC+EG L+KA  F       G   + VTYNT+
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           +   C   R+E A  +L+ M+ +K+ PD +TY ++ + + + GRLEEA K    MV+ G 
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG- 321

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                           + PS++ Y+  I+  C++G    A    +E  +KGI+   STY 
Sbjct: 322 ----------------LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYN 365

Query: 522 NLMNGLIKRRKS 533
           +L++ L   +++
Sbjct: 366 SLIHALFMEQRT 377


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 280/556 (50%), Gaps = 24/556 (4%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G +PD    + +++A  + G+++   ++L  M K+GL PN  TYN LV+GY   G  +
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP-DVVTYNTL 121
              RV+ LM++     +V T  ML+ G+C  G ++EA +L +E+E  +LL  D   Y  L
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVL 338

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++ + + GR  +A ++ DE+   G+K N V  N +IK YCK G++ +A ++   M +   
Sbjct: 339 VDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNL 398

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PDC +YNTL+D  C+ G + +AF + + M   G+    +T NT++  L      D+A  
Sbjct: 399 KPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALH 458

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +   +RG   +E+S  T++  +F+   ++RA+ LW E+  R    ST  +N MI GL 
Sbjct: 459 LWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLC 518

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + GK  +A  + + + + G+ PDE T+ T+  G+C  G V++A Q    M  ++    I 
Sbjct: 519 KMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIE 578

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N L+ GL +   L            +G + + VTY TLIS  C E++L+ AF L  EM
Sbjct: 579 MYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEM 638

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE------TGKINHQVVQPNTS--- 472
            E+   P+    + I ++L    R+ EA      M++        K + ++V+ + +   
Sbjct: 639 IERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEA 698

Query: 473 -KTPEEIDPSSIS--------YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
            K  + +D S I         Y+  I+  C  G+  +A  +      +G   +  TY  L
Sbjct: 699 QKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTL 758

Query: 524 MNGLIKRRKSISKAVD 539
           ++       S+S  VD
Sbjct: 759 IHAC-----SVSGNVD 769



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 258/549 (46%), Gaps = 68/549 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y  ++D   + G++ +   +  +M + GL  N    N L+ GYCKLG + EA RV 
Sbjct: 331 DERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVF 390

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      PD ++YN L++G+C  G + +AF L +EM    + P VVTYNT+I    + 
Sbjct: 391 VGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDV 450

Query: 129 GRSMEAFKLIDELDEHGIKPN-----------------------------------AVTH 153
           G   +A  L   + E G+ PN                                    V  
Sbjct: 451 GSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAF 510

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N MI   CK GK+ +A  +   M+E G SPD +TY TL D  CK GN++EAF++  VM R
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           + +  +    N+++  L   +KL++   LL     RG   + V+YGTLI+G+  ++K ++
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L+ EM ER   P+    + ++  L +  +  +A  +L+++L   ++         +H
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA--------VH 682

Query: 334 GFCSEGQVEKALQFHNKMVEKSF-KPDI-------VTCNILLSGLCREGILEKALKFFRS 385
             CS+  V+  L    + +  S  K DI       +  NI + GLC+ G L++A      
Sbjct: 683 NKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSV 742

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + +G   D+ TY TLI +      +++AF L  EM EK L P+   Y A+   L + G 
Sbjct: 743 LMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGN 802

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           ++ AQ+    + + G +                 P++++Y+  I  +C  G    A ++ 
Sbjct: 803 IDRAQRLFYKLYQKGLV-----------------PNAVTYNILIGCYCRIGDLDKASRLR 845

Query: 506 EETRQKGIA 514
           E+  ++GI+
Sbjct: 846 EKMTEEGIS 854



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 256/527 (48%), Gaps = 19/527 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            ++ ++ A  ++G       +  +M + G VP   + + L+    + G  + A+ V D +
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                +PDV+  ++++N  C  G ++ A  + ++M    L P+VVTYN L+N +   G  
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNT 190
               +++  + E G+  N VT  ++++ YCK+GK+D+A K++R +EE+     D   Y  
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+D  C+ G ME+A R+ D M R GLK+N +  NT++   C   ++ EA  +        
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  SY TL+ GY R+ K ++A  L +EM    I P+  TYN +I GL   G  + A+
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + + +++ G+ P+E +  T++  F   G  ++A+    +++ + F    V  N ++SGL
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G L +A   F      G + D +TY TL    CK   +++AF +   ME + +    
Sbjct: 518 CKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASI 577

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y ++   L +  +L +    T ++VE                   + P+ ++Y   I+
Sbjct: 578 EMYNSLIDGLFKIRKLNDV---TDLLVEM--------------QTRGLSPNVVTYGTLIS 620

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
             C + +   A  ++ E  ++G   N      +++ L  R   IS+A
Sbjct: 621 GWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLY-RDDRISEA 666



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 189/392 (48%), Gaps = 35/392 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++  T+LD  FK G  +    L  ++  +G   +   +N ++SG CK+G L EA
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M +    PD  TY  L +G+C  G ++EAF+++  ME   +   +  YN+LI+ 
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+  +  +   L+ E+   G+ PN VT+  +I  +C E K+DKA  +   M E GF+P+
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646

Query: 185 CVTYNTLIDANCKAGNMEEA---------FRMMDVMGRKGLKM----------------- 218
            V  + ++ +  +   + EA         F ++ V  +   K+                 
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLD 706

Query: 219 ---------NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                    N I  N  +  LC   KLDEA  +L+    RG+  D  +Y TLI       
Sbjct: 707 KSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSG 766

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             + A KL DEM E+ ++P+   YNA+I GL + G  ++A  +  +L Q G++P+  T+N
Sbjct: 767 NVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYN 826

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            +I  +C  G ++KA +   KM E+     I+
Sbjct: 827 ILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 157/354 (44%), Gaps = 70/354 (19%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G     V +NT++  L K GKL E   +   MK+ GL P+  TY  L  GYCK G ++
Sbjct: 500 GRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQ 559

Query: 63  EAMR--------------------------------VVDLMT--QNKSL-PDVWTYNMLI 87
           EA +                                V DL+   Q + L P+V TY  LI
Sbjct: 560 EAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLI 619

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR----------------- 130
           +GWC+   L++AF L  EM      P+VV  + +++  +   R                 
Sbjct: 620 SGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDIL 679

Query: 131 ---------------SMEAFKLIDELDEHGI---KPNAVTHNIMIKWYCKEGKIDKACKI 172
                          ++EA K+ D LD+  I     N + +NI I   CK GK+D+A  +
Sbjct: 680 AVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSV 739

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  +   GF PD  TY TLI A   +GN++EAF++ D M  KGL  N    N +++ LC 
Sbjct: 740 LSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCK 799

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
              +D A  L     ++G   + V+Y  LI  Y R    ++A +L ++M E  I
Sbjct: 800 LGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 267/543 (49%), Gaps = 23/543 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD V+YN +++  F +G++++   L  +M   G+ P+  TYN ++ G CK   +  A 
Sbjct: 189 CSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAE 245

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M +    P+  TYN +I+G C A  ++ A  + ++M    + P  VTYNT+I+  
Sbjct: 246 DVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL 305

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++     A  +  ++ + G+KP+ VT+N +I   CK   IDKA  + + M + G  PD 
Sbjct: 306 CKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN 365

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TY  +ID  CKA +++ A  +   M  KG+K N  T N ++H      + +E    +  
Sbjct: 366 LTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKE 425

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            S      D  +YG L+    ++ K N A  L+D M  + I PS   Y  M+ G  + G 
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +  D+LN ++ +G+ P+   FNT+I  +     +++ +    KM ++   P++VT   
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+  LC+ G ++ A+  F   I +G   ++V +N+L+  LC   + E    L  EM  + 
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--------SKTPEE 477
           + PD   +  +   L + GR+ EA++    MV  G +   V+  NT        S+  E 
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG-LKPDVISYNTLIDGHCFASRMDEA 664

Query: 478 I-----------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           +            P+ +SY+  ++ +C  GR  +A  +F E  +KG+     TY  ++NG
Sbjct: 665 VKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724

Query: 527 LIK 529
           L +
Sbjct: 725 LFR 727



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 259/525 (49%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P NVTYNTI+D L K   ++    +   M  +G+ P+  TYN ++ G CK   + +A
Sbjct: 290 GVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKA 349

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V   M      PD  TY ++I+G C A  ++ A  + ++M    + P+  TYN LI+ 
Sbjct: 350 EGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHG 409

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G+  E  + I E+  H ++P+  T+ +++ + CK GK ++A  +  +M   G  P 
Sbjct: 410 YLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS 469

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  ++    K G + E   ++++M   G+  N    NT++        +DE   +  
Sbjct: 470 VTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFI 529

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + V+YGTLI    +  + + A+  +++M    + P+   +N++++GL    
Sbjct: 530 KMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+  ++  E+L  G+ PD   FNT++   C EG+V +A +  + MV    KPD+++ N
Sbjct: 590 KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C    +++A+K     +  G   + V+YNTL+   CK  R+++A+ L  EM  K
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P   TY  I   L  SGR  EA++    M+++ K+                  S  +
Sbjct: 710 GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL-----------------WSICT 752

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           YS  ++  C    + +A +IF+      + ++  T+  +++GL K
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 243/526 (46%), Gaps = 70/526 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+VTYNTI+D L K   +++   +   M  +G+ P+  TY I++ G CK   +  A
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V   M      P+  TYN LI+G+ + G  EE  +  KEM +  L PDV TY  L++ 
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK------------------- 165
             ++G+  EA  L D +   GIKP+   + IM+  Y K+G                    
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504

Query: 166 ----------------IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
                           ID+   I   M++ G SP+ VTY TLIDA CK G +++A    +
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFN 564

Query: 210 VMGRKGLKMNTIT-----------------------------------LNTILHTLCCEK 234
            M  +G+  N +                                     NT+L  LC E 
Sbjct: 565 QMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEG 624

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           ++ EA  L++S    G   D +SY TLI G+    + + A+KL D M    + P+  +YN
Sbjct: 625 RVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYN 684

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ G  ++G+ + A  +  E+L+ G+ P   T+NTI++G    G+  +A + +  M++ 
Sbjct: 685 TLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKS 744

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
                I T +I+L G C+    ++A K F+S       +D +T+N +I  L K  R EDA
Sbjct: 745 RKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDA 804

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             L + +    L P   TY  I   L+E G LEE     S+M ++G
Sbjct: 805 MDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 229/447 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  +LD L K GK NE R L   M ++G+ P+ T Y I++ GY K G L E   +
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++LM  N   P+   +N +I  +    M++E   +  +M+   L P+VVTY TLI+   +
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A    +++   G+ PN V  N ++   C   K +K  ++   M   G  PD V 
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NT++   CK G + EA R++D M   GLK + I+ NT++   C   ++DEA  LL+   
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   + VSY TL+ GY +  + + A  L+ EM  + + P   TYN ++ GL +SG+  
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A ++   +++S  +    T++ I+ GFC     ++A +    +     + DI+T NI++
Sbjct: 733 EARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMI 792

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL + G  E A+  F +    G     VTY  +  +L +E  LE+   L S ME+    
Sbjct: 793 DGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTA 852

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTS 454
           P+ +   A+   L++ G +  A  + S
Sbjct: 853 PNSHMLNALIRKLLDRGEIPRAGAYLS 879



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 268/540 (49%), Gaps = 25/540 (4%)

Query: 9   DNVTYNTILDALFKKGKLNE-VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           D++  N +L  L    ++ E +  LL  M + G      +YN L+ G C     +EA  +
Sbjct: 118 DDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEAREL 177

Query: 68  VDLMT--QNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +M   Q+ S  PDV +YN++ING+ N G +++A+ L  EM    + PDVVTYNT+I+ 
Sbjct: 178 LHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDG 234

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++     A  +  ++ E G+KPN VT+N +I   CK  ++D A  + + M + G  P 
Sbjct: 235 LCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPS 294

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT+ID  CKA  ++ A  +   M  +G+K + +T NTI+  LC  + +D+A  +  
Sbjct: 295 NVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQ 354

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D ++Y  +I G  + +  +RA  ++ +M ++ + P+  TYN +I G   +G
Sbjct: 355 QMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTG 414

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+ +  + E+    + PD  T+  ++   C  G+  +A    + M+ K  KP +    
Sbjct: 415 QWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYG 474

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+L G  ++G L +        +  G + +   +NT+I +  K   +++   +  +M+++
Sbjct: 475 IMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ 534

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV---------QPNTSKTP 475
            L P+  TY  +  AL + GR+++A    + M+  G   + VV           +  +  
Sbjct: 535 GLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKV 594

Query: 476 EE---------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           EE         I P  + ++  +   C +GR  +A ++ +     G+  +  +Y  L++G
Sbjct: 595 EELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 246/526 (46%), Gaps = 59/526 (11%)

Query: 41  LVPNRTTYNILVSGYCKLG-----------WLKEAMRVVDLMTQN--------------- 74
           + P+  TY+I++  +C++G            LK   RV D++                  
Sbjct: 80  VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139

Query: 75  ----KSLPDVW------TYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTL 121
               + +P+V       +YN L+ G C+    EEA  L   M   +     PDVV+YN +
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN FF  G+  +A+ L  E+   G+ P+ VT+N +I   CK  ++D+A  + + M E G 
Sbjct: 200 INGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTYNT+ID  CKA  ++ A  +   M  KG+K + +T NTI+  LC  + +D A  
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +      RG   D V+Y T+I G  + +  ++A  ++ +M ++ + P   TY  +I GL 
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++   ++A  +  +++  G+ P+  T+N +IHG+ S GQ E+ +Q   +M     +PD+ 
Sbjct: 377 KAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVF 436

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T  +LL  LC+ G   +A   F S I KG       Y  ++    K+  L +   LL+ M
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
               + P+   +  +  A  +   ++E       M + G                 + P+
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG-----------------LSPN 539

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++Y   I+  C  GR  DA+  F +   +G+  N   + +L+ GL
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 205/410 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P++  +NT++ A  K+  ++EV  +   MK+QGL PN  TY  L+   CKLG + +A
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   + M      P+   +N L+ G C     E+   L  EM +  + PD+V +NT++  
Sbjct: 560 VLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR MEA +LID +   G+KP+ +++N +I  +C   ++D+A K++  M   G  P+
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTL+   CKAG ++ A+ +   M RKG+     T NTIL+ L    +  EA  L  
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYV 739

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  K        +Y  ++ G+ ++   + A K++  +    +     T+N MI GL + G
Sbjct: 740 NMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGG 799

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A+D+   +  +G++P   T+  I      EG +E+     + M +    P+    N
Sbjct: 800 RKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLN 859

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
            L+  L   G + +A  +      K  ++++ T + LIS   +E   + A
Sbjct: 860 ALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHA 909



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 195/375 (52%), Gaps = 4/375 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG- 59
           M+  G  P+ VTY T++DAL K G++++     + M  +G+ PN   +N LV G C +  
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           W K     ++++ Q    PD+  +N ++   C  G + EA RL   M  + L PDV++YN
Sbjct: 591 WEKVEELFLEMLNQGIR-PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+    + R  EA KL+D +   G+KPN V++N ++  YCK G+ID A  + R M   
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI-TLNTILHTLCCEKKLDE 238
           G +P   TYNT+++   ++G   EA R + V   K  K+ +I T + IL   C     DE
Sbjct: 710 GVTPGVETYNTILNGLFRSGRFSEA-RELYVNMIKSRKLWSICTYSIILDGFCKNNCFDE 768

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+ +  S       LD +++  +I G F+  +   A+ L+  +    ++PS  TY  +  
Sbjct: 769 AFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAE 828

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G  E+   + + + +SG  P+    N +I      G++ +A  + +K+ EK+F  
Sbjct: 829 NLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSL 888

Query: 359 DIVTCNILLSGLCRE 373
           +  T ++L+S   RE
Sbjct: 889 EASTTSMLISLFSRE 903



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 234/480 (48%), Gaps = 30/480 (6%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLIN----GWCNAGMLEEAFRLRKEME--SLKLLPD 114
           L +A+++ D +  +     V   N L++      C++       R  + +   S K+ PD
Sbjct: 24  LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI-V 173
             TY+ +I  F   GR    F     + + G + + +  N ++K  C   ++ +A  + +
Sbjct: 84  CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM--GR-KGLKMNTITLNTILHTL 230
           R M E G     V+YNTL+   C     EEA  ++ +M  G+      + ++ N +++  
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGF 203

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
             E ++D+AY L     + G   D V+Y T+I G  + ++ +RA  ++ +M E+ + P+ 
Sbjct: 204 FNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TYN +I GL ++ + + A  +  +++  G+ P   T+NTII G C    V++A     +
Sbjct: 261 VTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M+++  KPD VT N ++ GLC+   ++KA   F+  I KG   D++TY  +I  LCK + 
Sbjct: 321 MIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQS 380

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           ++ A G+  +M +K + P+  TY  +    + +G+ EE                 VVQ  
Sbjct: 381 VDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEE-----------------VVQRI 423

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              +  +++P   +Y   ++  C  G+  +A  +F+   +KGI  + + Y  +++G  K+
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKK 483



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V+YNT+L    K G+++    L  +M ++G+ P   TYN +++G  + G 
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  +   M +++ L  + TY+++++G+C     +EAF++ + + S+ L  D++T+N 
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+  F+ GR  +A  L   +  +G+ P+ VT+ ++ +   +EG +++   +   ME++G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE------K 234
            +P+    N LI      G +  A   +  +  K   +   T + ++     E      K
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAK 910

Query: 235 KLDEAYMLLNSASK 248
            L E     N A+K
Sbjct: 911 SLPEKCRFFNEANK 924



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 30/269 (11%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQ---SGKTEQAIDMLNELLQ---SGMIPDETT 327
           ALKL+DE+       S    N ++  +S+   S  ++ A+   N +L+   + + PD  T
Sbjct: 27  ALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCT 86

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK-FFRSW 386
           ++ +I  FC  G++E        +++  ++ D +  N LL GLC    + +A+    R  
Sbjct: 87  YSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQM 146

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM---EEKKLGPDRYTYAAIHTALVES 443
              G  +  V+YNTL+  LC  RR E+A  LL  M   ++    PD  +Y  +       
Sbjct: 147 PEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNE 206

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G++++A    S+ +E G                 + P  ++Y+  I+  C       A  
Sbjct: 207 GQVDKAY---SLFLEMG-----------------VSPDVVTYNTIIDGLCKAQEVDRAED 246

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +F++  +KG+  N  TY  +++GL K ++
Sbjct: 247 VFQQMVEKGVKPNNVTYNTIIDGLCKAQE 275


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 242/460 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D VT+N +++   + G  +    + +++ K+G  PN  T   L+ G C  G 
Sbjct: 82  MEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQ 141

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   D +       +   Y  LING C  G    A +L + ++   + P+VV YNT
Sbjct: 142 IHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 201

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EAF L  E+   GI P+ VT++ +I  +C  GK++ A  +   M    
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  T++ L+D  CK G ++EA  ++ +M ++G+K + +T  +++   C  K++++A 
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N+ ++ G   +  SY  +I G+ + +K + A+ L+ EM  + I+P   TYN++I GL
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SGK   A+ +++E+   G+  D+ T+N+I+   C   QV+KA+    KM ++  +PD+
Sbjct: 382 CKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDM 441

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  IL+ GLC+ G L+ A   F   ++KG  +   TY  +I   C     + A  LLS+
Sbjct: 442 YTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSK 501

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ME+    P+  TY  I  +L E    + A+K    M+  G
Sbjct: 502 MEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 232/450 (51%), Gaps = 17/450 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P ++ +  ++         + A  L +EME   +  D+VT+N LIN F + G +  +F +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
              + + G +PNA+T   +IK  C +G+I +A      +   GF  + V Y TLI+  CK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G    A +++  +  K ++ N +  NTI+ ++C  K ++EA+ L +    +G   D V+
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI+G+    K N A+ L+++M   +I P  +T++ ++ G  + G+ ++A ++L  ++
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G+ PD  T+ +++ G+C   QV KA    N M +     ++ + NI+++G C+   ++
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A+  F+    K    D VTYN+LI  LCK  ++  A  L+ EM ++ +  D+ TY +I 
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
            AL ++ ++++A    + M + G                 I P   +Y+  I+  C  GR
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEG-----------------IQPDMYTYTILIDGLCKGGR 456

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            KDA  IFE+   KG  I   TY  ++ G 
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGF 486



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 156/280 (55%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T++ ++D   K+G++ E +++L+ M KQG+ P+  TY  L+ GYC +  + +A  +
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M Q     +V +YN++ING+C    ++EA  L KEM    ++PDVVTYN+LI+   +
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG+   A KL+DE+ + G+  + +T+N ++   CK  ++DKA  ++  M++ G  PD  T
Sbjct: 384 SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYT 443

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  CK G +++A  + + +  KG  +   T   ++   C     D+A  LL+   
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             G   +  +Y  +I   F  ++ + A KL  EM  R ++
Sbjct: 504 DNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 170/318 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+ ++      GKLN+   L + M  + + P+  T++ILV G+CK G +KEA
Sbjct: 226 GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA 285

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+ +M +    PDV TY  L++G+C    + +A  +   M    +  +V +YN +IN 
Sbjct: 286 KNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMING 345

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +  EA  L  E+    I P+ VT+N +I   CK GKI  A K+V  M + G   D
Sbjct: 346 FCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHD 405

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+++DA CK   +++A  ++  M  +G++ +  T   ++  LC   +L +A  +  
Sbjct: 406 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFE 465

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +GY +   +Y  +I G+  ++  ++AL L  +M++   +P+  TY  +I  L +  
Sbjct: 466 DLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKD 525

Query: 305 KTEQAIDMLNELLQSGMI 322
           + + A  +L E++  G++
Sbjct: 526 ENDMAEKLLREMIARGLL 543



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 187/370 (50%), Gaps = 18/370 (4%)

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  + R ME NG + D VT+N LI+   + G+   +F +   + +KG + N ITL T++ 
Sbjct: 75  AISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIK 134

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC + ++ +A    +     G++L++V YGTLI G  +  + + AL+L   +  + + P
Sbjct: 135 GLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 194

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +   YN +I  + +     +A D+ +E++  G+ PD  T++ +I GFC  G++  A+   
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           NKM+ +   PD+ T +IL+ G C+EG +++A       + +G   D VTY +L+   C  
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           +++  A  + + M +  +  +  +Y  +     +  +++EA      M            
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM------------ 362

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  + I P  ++Y+  I+  C  G+   AL++ +E   +G+  +K TY ++++ L 
Sbjct: 363 -----HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALC 417

Query: 529 KRRKSISKAV 538
           K  + + KA+
Sbjct: 418 KNHQ-VDKAI 426



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 155/331 (46%), Gaps = 16/331 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY +++D      ++N+ + + + M + G+  N  +YNI+++G+CK+  + EA
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +   M     +PDV TYN LI+G C +G +  A +L  EM    +  D +TYN++++ 
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++ +  +A  L+ ++ + GI+P+  T+ I+I   CK G++  A  I  ++   G++  
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNIT 475

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  +I   C     ++A  ++  M   G   N  T   I+ +L  + + D A  LL 
Sbjct: 476 VYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLR 535

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG          L T +F+     R   L+  ++ R              G    G
Sbjct: 536 EMIARGLLFGWKKAYCLFTRFFQ-----RRSNLYPPLEVRS-----------GHGSIDLG 579

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           K E   +  +ELL+      +T F  ++ G 
Sbjct: 580 KVEHGPESKSELLKGLSYSADTHFLNMVPGL 610



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 17/218 (7%)

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           +   N +L     P    F  I+         + A+  H +M       D+VT NIL++ 
Sbjct: 41  VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC 100

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
             + G    +   F + + KG   +++T  TLI  LC + ++  A     ++       +
Sbjct: 101 FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLN 160

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
           +  Y  +   L + G+   A +         +++ ++VQPN            + Y+  I
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLLR------RVDGKLVQPNV-----------VMYNTII 203

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  C      +A  ++ E   KGI+ +  TY  L++G 
Sbjct: 204 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGF 241



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  TY  ++D L K G+L + +++  D+  +G      TY +++ G+C    
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ ++  M  N  +P+  TY ++I         + A +L +EM +  LL        
Sbjct: 492 FDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGWKKAYC 551

Query: 121 LINRFFE 127
           L  RFF+
Sbjct: 552 LFTRFFQ 558


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 233/461 (50%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T+ T++    ++G +     + + M + G  P   T N+L++GYCK+G 
Sbjct: 223 MSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGR 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+  +     +   PD  TYN  ++G C  G +  A ++   M      PDV TYNT
Sbjct: 283 VEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 342

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   ++G   EA  +++++ + G  P+  T N +I     + ++++A  + R +   G
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  T+N LI+A CK G+     R+ + M   G   + +T N ++  LC   KL  A 
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN     G     V+Y T+I    +  +   A +++D+M  + I  S  T+N +I GL
Sbjct: 463 DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGL 522

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + + A +++ ++++ G+ P+  T+N+I+  +C +G ++KA      M    F+ D+
Sbjct: 523 CKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDV 582

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++GLC+ G  + ALK  R   +KG       YN +I SL +   L DA  L  E
Sbjct: 583 VTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFRE 642

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETG 460
           M E    PD  TY  +  +L    G ++EA  F   MV  G
Sbjct: 643 MTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKG 683



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 239/482 (49%), Gaps = 21/482 (4%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N+LV G  KL  L+    V + MT     PDV T N LI   C A  +  A  + +EM S
Sbjct: 170 NVLVEG-SKLKLLES---VYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS 225

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + PD  T+ TL+  F E G    A ++  ++ E G  P  VT N++I  YCK G+++ 
Sbjct: 226 HGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVED 285

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A   ++    +GF PD VTYNT +   C+ G++  A ++MD+M ++G   +  T NT+++
Sbjct: 286 ALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 345

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            L    +LDEA  ++N    RG   D  ++ TLI       +   AL L  E+  + + P
Sbjct: 346 CLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSP 405

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
             +T+N +I  L + G     I +  E+  SG  PDE T+N +I   CS G++  AL   
Sbjct: 406 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLL 465

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N+M         VT N ++  LC++  +E+A + F     +G +  +VT+NTLI  LCK 
Sbjct: 466 NEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKA 525

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           +R++DA  L+ +M ++ L P+  TY +I T   + G +++A      M   G        
Sbjct: 526 KRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGF------- 578

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                   EID   ++Y   IN  C  GR + AL++    R KGI      Y  ++  L 
Sbjct: 579 --------EID--VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 628

Query: 529 KR 530
           +R
Sbjct: 629 RR 630



 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 258/536 (48%), Gaps = 17/536 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D V +N +L+ L +  KL  +  + ++M  +G+ P+  T N L+   C+   ++ 
Sbjct: 156 FGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRT 215

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +++ M+ +   PD  T+  L+ G+   G +E A R++ +M      P  VT N LIN
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + GR  +A   I +    G +P+ VT+N  +   C+ G +  A K++  M + G  P
Sbjct: 276 GYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYNT+I+   K G ++EA  +++ M  +G   +T T NT++  L  + +L+EA  L 
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +G   D  ++  LI    +    +  ++L++EMK     P   TYN +I  L   
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK   A+D+LNE+  +G      T+NTII   C + ++E+A +  ++M  +      VT 
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC+   ++ A +     + +G   +++TYN++++  CK+  ++ A  +L  M  
Sbjct: 516 NTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA 575

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
                D  TY  +   L ++GR + A K    M   G                 I P+  
Sbjct: 576 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG-----------------IRPTPK 618

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +Y+  I     +   +DAL +F E  + G   +  TY  +   L +    I +A D
Sbjct: 619 AYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFD 674



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 222/509 (43%), Gaps = 58/509 (11%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P    Y  ++     AG  +    L +EM         V   + +  +    R  +A  L
Sbjct: 87  PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146

Query: 138 I-DELDE--HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
           + ++LD    G++ + V  N ++    +  K+     +   M   G  PD VT NTLI A
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206

Query: 195 NCKA-----------------------------------GNMEEAFRMMDVMGRKGLKMN 219
            C+A                                   G++E A R+   M   G    
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T+N +++  C   ++++A   +      G+  D+V+Y T + G  ++   + ALK+ D
Sbjct: 267 GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMD 326

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M +    P  FTYN +I  LS++G+ ++A  ++N+++  G +PD TTFNT+I    S+ 
Sbjct: 327 LMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQN 386

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           ++E+AL    ++  K   PD+ T NIL++ LC+ G     ++ F      G   D VTYN
Sbjct: 387 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYN 446

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI  LC   +L +A  LL+EME         TY  I  AL +  R+EEA++    M   
Sbjct: 447 ILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ 506

Query: 460 GKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKINEHCSQGRYKD 500
           G I+   V  NT                       E + P++I+Y+  +  +C QG  K 
Sbjct: 507 G-ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           A  I E     G  I+  TY  L+NGL K
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCK 594



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 169/352 (48%), Gaps = 20/352 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P    Y  ++     AG  +    ++  M R+G ++  + + + + +    ++ D+A 
Sbjct: 85  FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144

Query: 241 -MLLNSASKR--GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            ++LN       G   D V +  L+       K      +++EM  R I P   T N +I
Sbjct: 145 DLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLI 204

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
             L ++ +   A+ ML E+   G+ PDETTF T++ GF  EG +E AL+   KM+E    
Sbjct: 205 KALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCS 264

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P  VT N+L++G C+ G +E AL + +  I  G   D VTYNT +  LC+   +  A  +
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           +  M ++   PD +TY  +   L ++G L+EA+   + MV+ G +               
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL--------------- 369

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             P + +++  I    SQ R ++AL +  E   KG++ +  T+  L+N L K
Sbjct: 370 --PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 419



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW-LKE 63
           G  P    YN ++ +LF++  L +  +L  +M + G  P+  TY I+    C+ G  +KE
Sbjct: 612 GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKE 671

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           A   +  M     +P+  ++ ML  G  N GM
Sbjct: 672 AFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 703


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 253/527 (48%), Gaps = 52/527 (9%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D V YN +L+ L +  K+  +  + S+M  +G+ P                    
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP-------------------- 179

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
                          DV T+N L+   C A  +  A  + +EM S  + PD  T+ TL+ 
Sbjct: 180 ---------------DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQ 224

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F E G    A ++   + E G     VT N++I  YCK G+++ A   ++    +GF P
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TYNT ++  C+  ++  A ++MDVM ++G   +  T N +++ LC   +L+EA  +L
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N    RG   D  ++ TLI       +   AL L  ++  + + P  +T+N +I  L + 
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G    A+ +  E+  SG  PDE T+NT+I   CS G++ KAL     M         +T 
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++ GLC++  +E+A + F    L+G + +++T+NTLI  LCK+++++DAFGL+++M  
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMIS 524

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + L P+  TY +I T   + G +++A      M   G                E+D   +
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF---------------EVD--VV 567

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +Y   IN  C  GR + AL++    R KG+      Y  ++  L +R
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 234/463 (50%), Gaps = 1/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T+ T++    ++G +     + + M + G    + T N+L++GYCKLG 
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+  +     +   PD  TYN  +NG C    +  A ++   M      PDV TYN 
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++G+  EA  +++++ + G  P+  T N +I   C   ++++A  + R +   G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  T+N LI+A CK G+   A R+ + M   G   + +T NT++  LC   KL +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G     ++Y T+I G  +  +   A +++D+M  + I  +  T+N +I GL
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K + A  ++N+++  G+ P+  T+N+I+  +C +G ++KA      M    F+ D+
Sbjct: 507 CKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++GLC+ G  + ALK  R   +KG       YN ++ SL +   + DA  L  E
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           M E    PD  TY  +   L    G ++EA  F   MV+ G I
Sbjct: 627 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 207/369 (56%), Gaps = 1/369 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN +++ L K G+L E + +L+ M  +G +P+ TT+N L++  C    L+EA+ +
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +T     PDV+T+N+LIN  C  G    A RL +EM++    PD VTYNTLI+    
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L+ +++  G   + +T+N +I   CK+ +I++A ++   M+  G S + +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NTLID  CK   +++AF +++ M  +GL+ N IT N+IL   C +  + +A  +L + +
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+ +D V+YGTLI G  +  +   ALK+   M+ + + P+   YN ++  L +     
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            A+ +  E+ + G  PD  T+  +  G C   G +++A  F  +MV+K F P+  +  +L
Sbjct: 619 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678

Query: 367 LSGLCREGI 375
             GL   G+
Sbjct: 679 AEGLLNLGM 687



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 179/336 (53%), Gaps = 1/336 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD  T+NT++ AL    +L E  DL   +  +G+ P+  T+NIL++  CK+G    A
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ + M  +   PD  TYN LI+  C+ G L +A  L K+MES       +TYNT+I+ 
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++ D++D  GI  NA+T N +I   CK+ KID A  ++  M   G  P+
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPN 530

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+++   CK G++++A  +++ M   G +++ +T  T+++ LC   +   A  +L 
Sbjct: 531 NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 590

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G      +Y  ++   FR      AL L+ EM E    P   TY  +  GL + G
Sbjct: 591 GMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650

Query: 305 -KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
              ++A D + E++  G IP+ ++F  +  G  + G
Sbjct: 651 GPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 55/270 (20%)

Query: 296 MIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           ++  L +    + A+ MLN  L +    P    +  II    + G ++       +M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWI--LKGKAVDSVTY-------------- 398
             +  +   +  L     + + + A+    + +  L G   D+V Y              
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 399 ---------------------NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
                                NTL+ +LC+  ++  A  +L EM  + + PD  T+  + 
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
              VE G +E A +  + M+E G                    + ++ +  IN +C  GR
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMG-----------------CSATKVTVNVLINGYCKLGR 266

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +DAL   ++    G   ++ TY   +NGL
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGL 296


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 252/457 (55%), Gaps = 2/457 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T N +++     G++     +L+ + K+G  P+  T N L+ G C  G +K+A
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 65  MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +   D L+ Q   L  V +Y  LING C  G    A +L ++++     P+V  Y+T+I+
Sbjct: 149 LHFHDKLLAQGFQLNQV-SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +     EA+ L  E+   GI  + VT++ +I  +C EGK+ +A  ++  M     +P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN L+DA CK G ++EA  ++ VM +  +K + IT +T++       ++ +A  + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N+ S  G   D  +Y  LI G+ +++  + AL L+ EM ++ ++P   TY+++I GL +S
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+     D+++E+   G   D  T++++I G C  G +++A+   NKM ++  +P+I T 
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            ILL GLC+ G L+ A + F+  + KG  ++  TYN +I+  CK+  LE+A  +LS+ME+
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
               P+ +T+  I  AL +    ++A+K    M+  G
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 232/453 (51%), Gaps = 17/453 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P +  +N +++ +        A  L   +E   + PD++T N LIN F   G+    F +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           + ++ + G  P+ VT N +IK  C +G++ KA      +   GF  + V+Y TLI+  CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G+   A +++  +  +  K N    +TI+  LC  + + EAY L +  + +G   D V+
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI G+  + K   A+ L +EM  + I P+ +TYN ++  L + GK ++A  +L  +L
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           ++ + PD  T++T++ G+    +V+KA    N M      PD+ T  IL++G C+  +++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +AL  F+    K      VTY++LI  LCK  R+   + L+ EM ++    D  TY+++ 
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L ++G L+ A    + M +                 +EI P+  +++  ++  C  GR
Sbjct: 417 DGLCKNGHLDRAIALFNKMKD-----------------QEIRPNIFTFTILLDGLCKGGR 459

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            KDA ++F++   KG  +N  TY  ++NG  K+
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 235/489 (48%), Gaps = 19/489 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P    +N ++  + K+     A+ +   +      PD+ T N+LIN +C+ G +   F +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++      PD VT NTLI      G+  +A    D+L   G + N V++  +I   CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G    A K++R ++     P+   Y+T+IDA CK   + EA+ +   M  KG+  + +T
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            +T+++  C E KL EA  LLN    +    +  +Y  L+    ++ K   A  +   M 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           +  + P   TY+ ++ G     + ++A  + N +   G+ PD  T+  +I+GFC    V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL    +M +K+  P IVT + L+ GLC+ G +            +G+  D +TY++LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGK 461
             LCK   L+ A  L ++M+++++ P+ +T+  +   L + GRL++AQ+ F  ++ +   
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +N                    +Y+  IN HC QG  ++AL +  +    G   N  T+ 
Sbjct: 477 LN------------------VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFE 518

Query: 522 NLMNGLIKR 530
            ++  L K+
Sbjct: 519 TIIIALFKK 527



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 170/318 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D VTY+T++     +GKL E   LL++M  + + PN  TYNILV   CK G +KEA
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+ +M +    PDV TY+ L++G+     +++A  +   M  + + PDV TY  LIN 
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++    EA  L  E+ +  + P  VT++ +I   CK G+I     ++  M + G   D
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPAD 408

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY++LID  CK G+++ A  + + M  + ++ N  T   +L  LC   +L +A  +  
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +GY+L+  +Y  +I G+ +      AL +  +M++   +P+ FT+  +I  L +  
Sbjct: 469 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 528

Query: 305 KTEQAIDMLNELLQSGMI 322
           + ++A  +L +++  G++
Sbjct: 529 ENDKAEKLLRQMIARGLL 546



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 162/350 (46%), Gaps = 52/350 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P  + +N ++D+  K  +   A  +   +  KG++ + ITLN +++  C          
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFC---------- 105

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
                     ++ ++++G                 +  ++ +R   P T T N +I GL 
Sbjct: 106 ----------HMGQITFG---------------FSVLAKILKRGYPPDTVTLNTLIKGLC 140

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G+ ++A+   ++LL  G   ++ ++ T+I+G C  G    A++   K+  +  KP++ 
Sbjct: 141 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE 200

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             + ++  LC+  ++ +A   F    +KG + D VTY+TLI   C E +L++A GLL+EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             K + P+ YTY  +  AL + G+++EA+   ++M++                   + P 
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC-----------------VKPD 303

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            I+YS  ++ +      K A  +F      G+  +  TY  L+NG  K +
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 116/216 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY  +++   K   ++E  +L  +M ++ +VP   TY+ L+ G CK G 
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     ++D M       DV TY+ LI+G C  G L+ A  L  +M+  ++ P++ T+  
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + GR  +A ++  +L   G   N  T+N+MI  +CK+G +++A  ++  ME+NG
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             P+  T+ T+I A  K    ++A +++  M  +GL
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 17/264 (6%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +  + A+  ++ M   +  P    +N ++   ++      A+ + + L   G+ PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+ FC  GQ+        K++++ + PD VT N L+ GLC +G ++KAL F    + 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G  ++ V+Y TLI+ +CK      A  LL +++ +   P+   Y+ I  AL +   + E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A    S M   G                 I    ++YS  I   C +G+ K+A+ +  E 
Sbjct: 218 AYGLFSEMTVKG-----------------ISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             K I  N  TY  L++ L K  K
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGK 284


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/399 (35%), Positives = 220/399 (55%), Gaps = 3/399 (0%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N L+SG  K     +   V   M + K   +V ++N+++NG C  G L  A  + ++M+ 
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFK---LIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
             + P+V+TYNTLI+ + + GR  + +K   ++ E+   GI PN VT+NI+I  +CK+  
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +  A ++   M+  G  P+ VTYN LI+  C  G ++EA  + D M    L+ N +T N 
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV 303

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +++  C  K ++EA  L N   K+G   + ++Y TLI  Y +D +   A  L++ M +R 
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I P   TYN +I GL + G  + A  ++NE++   +  D  T+N +I   C +G+  KA+
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  ++M EK   P  VT N L+ G CREG L  AL        KGK  + VT+N LI   
Sbjct: 424 KLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           C + RLEDA GLL+EM E+ L P+R TY  I   ++E G
Sbjct: 484 CLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 207/373 (55%), Gaps = 8/373 (2%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE---AMRV 67
           +++N +++ L K GKLN   D++ DMK  G+ PN  TYN L+ GYCK+G + +   A  +
Sbjct: 156 ISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAI 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      P+  TYN+LI+G+C    +  A R+  EM+   L P+VVTYN LIN    
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCS 275

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  EA  L D++    ++PN VTHN++I  +CK   +++A  +  +ME+ G  P+ +T
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLIDA CK G ME+AF + ++M  +G+     T N ++  LC +  +  A  L+N   
Sbjct: 336 YTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV 395

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +    D V+Y  LI    +  ++ +A+KL DEM E+ + PS  TYN ++ G  + G   
Sbjct: 396 SKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLR 455

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ +   + + G   +  T N +I GFC +G++E A    N+M+E+   P+  T  I+ 
Sbjct: 456 AALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII- 514

Query: 368 SGLCREGILEKAL 380
               +E ++EK  
Sbjct: 515 ----KEEMMEKGF 523



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 205/363 (56%), Gaps = 19/363 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRD---LLSDMKKQGLVPNRTTYNILVSGYCK 57
           M+ +G  P+ +TYNT++D   K G++ ++     +L +M  +G+ PN  TYNIL+ G+CK
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              +  AMRV   M +    P+V TYN+LING C+ G ++EA  LR +M S  L P+VVT
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +N LIN F ++    EA  L +++++ G+ PNA+T+  +I  YCK+G+++ A  +   M 
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI 360

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  P+  TYN LI   C+ G+++ A  +M+ M  K L  + +T N ++ +LC + +  
Sbjct: 361 DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESR 420

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL+   ++G     V+Y TL+ GY R+     AL +   M+ +    +  T+N +I
Sbjct: 421 KAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLI 480

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G    G+ E A  +LNE+L+ G++P+ TT+  I                  +M+EK F 
Sbjct: 481 KGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII----------------KEEMMEKGFV 524

Query: 358 PDI 360
           PDI
Sbjct: 525 PDI 527



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 200/384 (52%), Gaps = 20/384 (5%)

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           E+ +  I+ N ++ NI++   CK GK+++A  ++ +M+  G SP+ +TYNTLID  CK G
Sbjct: 145 EMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMG 204

Query: 200 NMEEAFR---MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
            + + ++   ++  M  KG+  N +T N ++   C ++ +  A  +     ++G   + V
Sbjct: 205 RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVV 264

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  LI G   D K + A+ L D+M    + P+  T+N +I G  ++    +AI++ N++
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            + G+ P+  T+ T+I  +C +G++E A   +N M+++   P++ T N L++GLCR+G +
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A       + K  + D VTYN LI SLCK+     A  LL EM EK L P   TY  +
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                  G L  A    + M   GK      Q N            ++++  I   C +G
Sbjct: 445 MDGYCREGNLRAALIVRTRMERKGK------QANV-----------VTHNVLIKGFCLKG 487

Query: 497 RYKDALQIFEETRQKGIAINKSTY 520
           R +DA  +  E  ++G+  N++TY
Sbjct: 488 RLEDANGLLNEMLERGLVPNRTTY 511



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 200/401 (49%), Gaps = 23/401 (5%)

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R  EAFK      ++G K + ++ N ++    KE +      + R M +     + +++N
Sbjct: 103 RGFEAFK---RAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFN 159

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY---MLLNSA 246
            +++  CK G +  A  +++ M   G+  N IT NT++   C   ++ + Y    +L   
Sbjct: 160 IVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEM 219

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   +EV+Y  LI G+ +DE  + A++++ EM+ + + P+  TYN +I GL   GK 
Sbjct: 220 VAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKV 279

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A+ + ++++ S + P+  T N +I+GFC    V +A+   N M ++   P+ +T   L
Sbjct: 280 DEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTL 339

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +   C++G +E A   +   I +G   +  TYN LI+ LC++  ++ A  L++EM  KKL
Sbjct: 340 IDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKL 399

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D  TY  +  +L + G   +A K    M E G                 ++PS ++Y+
Sbjct: 400 SADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG-----------------LNPSHVTYN 442

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ +C +G  + AL +     +KG   N  T+  L+ G 
Sbjct: 443 TLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 218/439 (49%), Gaps = 31/439 (7%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRF--FESGRSMEAFKLIDELDEHGIKPNAVTH 153
           LE  FR+   +   K    + ++   +++F  +E   S+ A      +       N++  
Sbjct: 32  LELTFRILNSLAHTKKYSKIRSF---LDKFVKYEKDYSVSAIFHAISMSGDSFCVNSILA 88

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA---GNMEEAFRMMDV 210
           ++++  + +  KI +  +  +   + GF    ++ N L+    K    G+ME  +R M  
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMI- 147

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF---R 267
             ++ +++N I+ N +++ LC   KL+ A  ++      G   + ++Y TLI GY    R
Sbjct: 148 --KRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             K  +A  +  EM  + I P+  TYN +I G  +      A+ +  E+ + G+ P+  T
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +N +I+G CS+G+V++A+   ++MV    +P++VT N+L++G C+   + +A+  F    
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G   +++TY TLI + CK+ R+EDAF L + M ++ + P+  TY  +   L   G ++
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            A+   + MV                  +++    ++Y+  I+  C +G  + A+++ +E
Sbjct: 386 AARSLMNEMVS-----------------KKLSADVVTYNILIDSLCKKGESRKAVKLLDE 428

Query: 508 TRQKGIAINKSTYMNLMNG 526
             +KG+  +  TY  LM+G
Sbjct: 429 MFEKGLNPSHVTYNTLMDG 447



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 156/316 (49%), Gaps = 20/316 (6%)

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
           +N+I  + ++       K+   +     A   G+ L  +S   L++G  ++ +      +
Sbjct: 83  VNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFV 142

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           + EM +R+I  +  ++N ++ GL + GK  +A D++ ++   G+ P+  T+NT+I G+C 
Sbjct: 143 YREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCK 202

Query: 338 EGQVE---KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            G++    KA     +MV K   P+ VT NIL+ G C++  +  A++ F     +G   +
Sbjct: 203 MGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPN 262

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTYN LI+ LC + ++++A  L  +M    L P+  T+  +     ++  + EA    +
Sbjct: 263 VVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFN 322

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M + G                 +DP++++Y+  I+ +C  GR +DA  ++     +GI 
Sbjct: 323 DMEKQG-----------------VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365

Query: 515 INKSTYMNLMNGLIKR 530
              STY  L+ GL ++
Sbjct: 366 PEVSTYNCLIAGLCRK 381



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/298 (19%), Positives = 118/298 (39%), Gaps = 56/298 (18%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S S   + ++ +    L+  + R+ K  R  + +    +     S  + N ++ GL +  
Sbjct: 75  SMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKES 134

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +      +  E+++  +  +  +FN +++G C  G++ +A      M      P+++T N
Sbjct: 135 ENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYN 194

Query: 365 ILLSGLC---REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            L+ G C   R G + KA    +  + KG   + VTYN LI   CK+  +  A  +  EM
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM 254

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           + + L                                                     P+
Sbjct: 255 QRQGL----------------------------------------------------RPN 262

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++Y+  IN  CS G+  +A+ + ++     +  N  T+  L+NG  K  K++++A++
Sbjct: 263 VVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCK-NKTVNEAIN 319


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 258/517 (49%), Gaps = 69/517 (13%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YNT+L++L + G ++E++ +  +M +  + PN  TYN +V+GYCKLG ++EA + V  + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-------------------------- 106
           +    PD +TY  LI G+C    L+ AF++  EM                          
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 107 ESLKL---------LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           E++ L          P V TY  LI     S R  EA  L+ E++E GIKPN  T+ ++I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              C + K +KA +++  M E G  P+ +TYN LI+  CK G +E+A  ++++M  + L 
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 218 MNT----------------------------------ITLNTILHTLCCEKKLDEAYMLL 243
            NT                                  +T N+++   C     D AY LL
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  + RG   D+ +Y ++I    + ++   A  L+D ++++ + P+   Y A+I G  ++
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK ++A  ML ++L    +P+  TFN +IHG C++G++++A     KMV+   +P + T 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            IL+  L ++G  + A   F+  +  G   D+ TY T I + C+E RL DA  ++++M E
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             + PD +TY+++     + G+   A      M +TG
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 269/540 (49%), Gaps = 7/540 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  + V Y  ++  L    +++E  DL   MK     P   TY +L+   C      EA
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V  M +    P++ TY +LI+  C+    E+A  L  +M    L+P+V+TYN LIN 
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G   +A  +++ ++   + PN  T+N +IK YCK   + KA  ++  M E    PD
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPD 461

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+LID  C++GN + A+R++ +M  +GL  +  T  +++ +LC  K+++EA  L +
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G   + V Y  LI GY +  K + A  + ++M  +  +P++ T+NA+I GL   G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A  +  ++++ G+ P  +T   +IH    +G  + A     +M+    KPD  T  
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             +   CREG L  A          G + D  TY++LI       +   AF +L  M + 
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701

Query: 425 KLGPDRYTYAAIHTALVE--SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              P ++T+ ++   L+E   G+ + ++     M    + +  VV+         + P++
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD-TVVELLEKMVEHSVTPNA 760

Query: 483 ISYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGL--IKRRKSISKAVD 539
            SY + I   C  G  + A ++F+   R +GI+ ++  +  L++    +K+    +K VD
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 239/475 (50%), Gaps = 55/475 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY  ++D+L  + K  + R+LL  M ++GL+PN  TYN L++GYCK G 
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+ VV+LM   K  P+  TYN LI G+C + + +    L K +E  K+LPDVVTYN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER-KVLPDVVTYNS 467

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    SG    A++L+  +++ G+ P+  T+  MI   CK  ++++AC +  ++E+ G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ V Y  LID  CKAG ++EA  M++ M  K    N++T N ++H LC + KL EA 
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587

Query: 241 ML----------------------------LNSASKR-------GYYLDEVSYGTLITGY 265
           +L                             + A  R       G   D  +Y T I  Y
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R+ +   A  +  +M+E  + P  FTY+++I G    G+T  A D+L  +  +G  P +
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707

Query: 326 TTFNTIIHG---------------FCSEG---QVEKALQFHNKMVEKSFKPDIVTCNILL 367
            TF ++I                  C+     + +  ++   KMVE S  P+  +   L+
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767

Query: 368 SGLCREGILEKALKFFRSWIL-KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            G+C  G L  A K F      +G +   + +N L+S  CK ++  +A  ++ +M
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 227/473 (47%), Gaps = 31/473 (6%)

Query: 62  KEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           K A+     ++QN      V++Y  L+    N G +   F++R  M +S   + D +   
Sbjct: 104 KTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVL 163

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            L  +  +  R    +KLI              +N ++    + G +D+  ++   M E+
Sbjct: 164 DLCRKMNKDERFELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVYMEMLED 212

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+  TYN +++  CK GN+EEA + +  +   GL  +  T  +++   C  K LD A
Sbjct: 213 KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + + N    +G   +EV+Y  LI G     + + A+ L+ +MK+ +  P+  TY  +I  
Sbjct: 273 FKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L  S +  +A++++ E+ ++G+ P+  T+  +I   CS+ + EKA +   +M+EK   P+
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           ++T N L++G C+ G++E A+        +  + ++ TYN LI   CK   +  A G+L+
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLN 451

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M E+K+ PD  TY ++      SG  + A +  S+M + G +                 
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV----------------- 494

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P   +Y+  I+  C   R ++A  +F+   QKG+  N   Y  L++G  K  K
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 214/437 (48%), Gaps = 18/437 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PD  TY +++D+L K  ++ E  DL   ++++G+ PN   Y  L+ GYCK G 
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +++ M     LP+  T+N LI+G C  G L+EA  L ++M  + L P V T   
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+R  + G    A+    ++   G KP+A T+   I+ YC+EG++  A  ++  M ENG
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  TY++LI      G    AF ++  M   G + +  T  +++  L     L+  Y
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL-----LEMKY 722

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  ++G   +  +   ++       + +  ++L ++M E  + P+  +Y  +I G+
Sbjct: 723 -----GKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770

Query: 301 SQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + G    A  + + + ++ G+ P E  FN ++   C   +  +A +  + M+     P 
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + +C +L+ GL ++G  E+    F++ +  G   D + +  +I  + K+  +E  + L +
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890

Query: 420 EMEEKKLGPDRYTYAAI 436
            ME+        TY+ +
Sbjct: 891 VMEKNGCKFSSQTYSLL 907


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 158/561 (28%), Positives = 280/561 (49%), Gaps = 53/561 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G L + VT   ++    ++ KL E   +L +M++ +G+V +   Y +L+ GYC++  + +
Sbjct: 283 GILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDD 342

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R+ D M       +++  N LING+C  G + EA RL   M    L P+  +Y+TL++
Sbjct: 343 AVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMD 402

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   G   +A  + +E+   GI+ N VTHN ++K  C+ G  + A  +   M + G +P
Sbjct: 403 GFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTP 462

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V+Y TL+D   K G    A  + + +  +G   +T   NT+++  C  +K+ EA    
Sbjct: 463 DEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETF 522

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N   + G+  D V+Y TLI GY +      A K+ ++M++  I+PS   YN++I GL +S
Sbjct: 523 NRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKS 582

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            KT + +D+L+E+   G+ P+  T+ T+I G+C EG+++KA   +  M+EK F P+++ C
Sbjct: 583 KKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIIC 642

Query: 364 NILLSGLCREGILEKALKFFRSWI---------------------LKGKAV--------- 393
           + ++S L R G +++A    +  +                     L  + +         
Sbjct: 643 SKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSK 702

Query: 394 -----DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
                +SV YN  I+ LCK  +++DA  + S +  +   PD +TY  +      +G + +
Sbjct: 703 SFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVND 762

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      M++ G                 + P+ I+Y+  IN  C  G    A ++F++ 
Sbjct: 763 AFSLRDEMLKRG-----------------LAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
             KG+A N  +Y  L++G  K
Sbjct: 806 HLKGLAPNVISYNILIDGYCK 826



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/580 (28%), Positives = 278/580 (47%), Gaps = 54/580 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+P   + N +L +L +KG+ +    +   + + G+VP+  T +I+V+ YCK GW
Sbjct: 174 MGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGW 233

Query: 61  -----------------------------------LKEAMRVVDLMTQNKSLPDVWTYNM 85
                                              ++ A  V+ LM +   L +  T  +
Sbjct: 234 VNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTL 293

Query: 86  LINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           LI G+C    LEEA ++ +EME S  ++ D   Y  LI+ +    +  +A +L DE+   
Sbjct: 294 LIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNV 353

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G++ N    N +I  YCK G++ +A +++  M +    P+  +Y+TL+D  C+ G + +A
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             + + M R G++ N +T N++L  LC     ++A  + +   KRG   DEVSY TL+  
Sbjct: 414 ISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            F+  +  RAL LW+++  R    ST+ +N MI G  +  K  +A +  N + + G  PD
Sbjct: 474 LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+ T+I G+C  G VE+A +   KM +++  P I   N L+ GL +     + +    
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLS 593

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
              LKG + + VTY TLI+  C E RL+ AF    +M EK   P+    + I ++L   G
Sbjct: 594 EMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLG 653

Query: 445 RLEEAQKFTSIMV-----------------ETGKINHQVVQPNTSKTPEEID-PSSISYS 486
           R++EA      MV                 + G ++ Q +     ++ +    P+S+ Y+
Sbjct: 654 RIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYN 713

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
             I   C  G+  DA +IF     +G + +  TY  L++G
Sbjct: 714 IAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHG 753



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 266/527 (50%), Gaps = 34/527 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  ++  ++  L +    +E R  L+++    + P++  Y+ LV       W  E +RV
Sbjct: 92  PNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSLVV------W-NELVRV 140

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +     K  P V  ++M++  +C  GM++ A  +   M  L  +P + + N L++    
Sbjct: 141 FE---DFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G S  A  + D ++  GI P+  T +IM+  YCK+G ++ A   V+ M+  GF  + VT
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LID     G+ME A  ++ +MG +G+  N +TL  ++   C + KL+EA  +L    
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315

Query: 248 K-RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           +  G  LDE +YG LI GY R  K + A++L DEM    +  + F  NA+I G  ++G+ 
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L  ++   + P+  +++T++ GFC EG V KA+  +N+M+    + ++VT N L
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSL 435

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLCR G  E AL  +   + +G   D V+Y TL+  L K      A  L +++  +  
Sbjct: 436 LKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGY 495

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
           G   Y +  +     +  ++ EA++  + M E G                  +P  ++Y 
Sbjct: 496 GRSTYAFNTMINGFCKMEKMIEAEETFNRMKELG-----------------FEPDGVTYR 538

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             I+ +C  G  ++A ++ E+  ++ I  +   Y +L+ GL K +K+
Sbjct: 539 TLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKT 585



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 234/486 (48%), Gaps = 35/486 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++ +Y+T++D   ++G + +   + ++M + G+  N  T+N L+ G C++G  ++A+ V
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451

Query: 68  VDLMTQNKSLPD-----------------------------------VWTYNMLINGWCN 92
             LM +    PD                                    + +N +ING+C 
Sbjct: 452 WHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCK 511

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
              + EA      M+ L   PD VTY TLI+ + + G   EAFK+ +++++  I P+   
Sbjct: 512 MEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIEL 571

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +I    K  K  +   ++  M   G SP+ VTY TLI   C  G +++AF     M 
Sbjct: 572 YNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMI 631

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            KG   N I  + I+ +L    ++DEA MLL        +LD   +  L      +  + 
Sbjct: 632 EKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQ 691

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           +     DE  +   +P++  YN  I GL +SGK + A  + + LL  G  PD  T+ T+I
Sbjct: 692 KIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLI 751

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG+ + G V  A    ++M+++   P+I+T N L++GLC+ G L++A K F    LKG A
Sbjct: 752 HGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLA 811

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            + ++YN LI   CK     +A  L ++M ++ + P   TY+A+     + G + +A   
Sbjct: 812 PNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNL 871

Query: 453 TSIMVE 458
              M E
Sbjct: 872 LDEMRE 877



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/551 (26%), Positives = 253/551 (45%), Gaps = 52/551 (9%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +++   K G+++E   LL  M    L P   +Y+ L+ G+C+ G + +A+ V + M +
Sbjct: 363 NALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLR 422

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
                +V T+N L+ G C  G  E+A  +   M    + PD V+Y TL++  F+ G    
Sbjct: 423 VGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFR 482

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  L +++   G   +    N MI  +CK  K+ +A +    M+E GF PD VTY TLID
Sbjct: 483 ALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLID 542

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK GN+EEAF++ + M ++ +  +    N+++  L   KK  E   LL+    +G   
Sbjct: 543 GYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSP 602

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA---- 309
           + V+YGTLI G+  + + ++A   + +M E+   P+    + ++  L + G+ ++A    
Sbjct: 603 NVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLL 662

Query: 310 -------------------------------IDMLNELLQSGMIPDETTFNTIIHGFCSE 338
                                           D L+E  +S  +P+   +N  I G C  
Sbjct: 663 QKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKS 722

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+V+ A +  + ++ + F PD  T   L+ G    G +  A       + +G A + +TY
Sbjct: 723 GKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITY 782

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           N LI+ LCK   L+ A  L  ++  K L P+  +Y  +     ++G   EA    + M++
Sbjct: 783 NALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLK 842

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                 I PS I+YS  I   C QG    A  + +E R+     N +
Sbjct: 843 EG-----------------ISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIA 885

Query: 519 TYMNLMNGLIK 529
            ++ L+ G +K
Sbjct: 886 KFVKLVEGHVK 896



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 189/386 (48%), Gaps = 35/386 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTY T++D   K G + E   +   M+K+ ++P+   YN L+ G  K   
Sbjct: 525 MKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKK 584

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +E M ++  M      P+V TY  LI GWC+ G L++AF    +M      P+V+  + 
Sbjct: 585 TREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSK 644

Query: 121 LINRFFESGR--------------------------------SMEAFKLIDELDEHGIK- 147
           +++  +  GR                                ++++ K+ D LDE     
Sbjct: 645 IVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSF 704

Query: 148 --PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             PN+V +NI I   CK GK+D A KI  ++   GFSPD  TY TLI     AGN+ +AF
Sbjct: 705 SLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAF 764

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M ++GL  N IT N +++ LC    LD A  L +    +G   + +SY  LI GY
Sbjct: 765 SLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGY 824

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++     AL L ++M +  I PS  TY+A+I+G  + G   +A ++L+E+ +     + 
Sbjct: 825 CKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNI 884

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKM 351
             F  ++ G    G+V+K  + HN M
Sbjct: 885 AKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 205/448 (45%), Gaps = 70/448 (15%)

Query: 5   GCLPDNVTYNTILDALFKKG-----------------------------------KLNEV 29
           G  PD V+Y T+LD LFK G                                   K+ E 
Sbjct: 459 GVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEA 518

Query: 30  RDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING 89
            +  + MK+ G  P+  TY  L+ GYCKLG ++EA +V + M +   LP +  YN LI G
Sbjct: 519 EETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGG 578

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
              +    E   L  EM    L P+VVTY TLI  + + GR  +AF    ++ E G  PN
Sbjct: 579 LFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPN 638

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNM--------------------------------- 176
            +  + ++    + G+ID+A  +++ M                                 
Sbjct: 639 VIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLD 698

Query: 177 -EENGFS-PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
                FS P+ V YN  I   CK+G +++A ++   +  +G   +  T  T++H      
Sbjct: 699 ESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAG 758

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            +++A+ L +   KRG   + ++Y  LI G  +    +RA KL+D++  + + P+  +YN
Sbjct: 759 NVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYN 818

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I G  ++G T +A+D+ N++L+ G+ P   T++ +I+GFC +G + KA    ++M E 
Sbjct: 819 ILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMREL 878

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKF 382
               +I     L+ G  + G ++K  K 
Sbjct: 879 FADQNIAKFVKLVEGHVKCGEVKKIAKL 906



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++YN ++D   K G   E  DL + M K+G+ P+  TY+ L+ G+CK G + +A
Sbjct: 809 GLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKA 868

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D M +  +  ++  +  L+ G    G +++  +L   M        V+++  +   
Sbjct: 869 TNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQMELD 928

Query: 125 FFESGRSM 132
            F + + M
Sbjct: 929 VFSNAKEM 936


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 215/396 (54%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +++ L K+GKL + +D +  M+  G+ PN  TYN +V GYC  G ++ A  ++  M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  PD +TY  LI+G C  G LEEA ++ +EM    L P  V YNTLI+ F   G  
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A    DE+ + GI P   T+N +I     E + D+A  +++ ++E G SPD +TYN L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  C+  N ++AF + D M   G+K    T  ++LH L  + ++ EA  L    +  G 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D + +  LI G+  +     A +L  +M   ++ P   T+N ++ G  + GK E+A +
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +E+ + G+ PD  +FNT+I G+   G ++ A +  N+M++  F P ++T N L+ GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           +    + A +  +  + KG   D  TY TLI  + K
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 239/451 (52%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           ++ ++ ++ +     + +E  +    MK++G++P   T N L+S + KL   + A  +  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M + +    V+T+N++IN  C  G L++A      ME+  + P++VTYNT+++ +  SG
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R   A  ++  +    I+P++ T+  +I   CK+G++++A KI   M + G  P  V YN
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLID  C  GN++ A    D M +KG+     T N+++H L  E++ DEA  ++    ++
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D ++Y  LI GY R   A +A  L DEM    I P+  TY +++  LS+  + ++A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            D+  ++   G++PD   FN +I G CS   V+ A +    M      PD VT N ++ G
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            CREG +E+A + F     +G   D +++NTLIS   +   ++DAF + +EM +    P 
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             TY A+   L ++   + A++    MV  G
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 196/375 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYNTI+      G++     +L+ MK+Q + P+  TY  L+SG CK G 
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA ++ + M Q    P    YN LI+G+CN G L+ A   + EM    + P + TYN+
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  F   R+ EA  +I E+ E GI P+A+T+NI+I  YC+     KA  +   M  +G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY +L+    K   M+EA  +   +  +G+  + I  N ++   C    +  A+
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAF 486

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +     DEV++ T++ G+ R+ K   A +L+DEMK R I P   ++N +I G 
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G  + A  + NE+L +G  P   T+N ++ G C   + + A +   +MV K   PD 
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606

Query: 361 VTCNILLSGLCREGI 375
            T   L+ G+ +  I
Sbjct: 607 TTYFTLIEGIAKVNI 621



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 224/450 (49%), Gaps = 17/450 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           ++ LI   C+    +EAF     M+   +LP + T N+L++ F +  R+  A+ L  E+ 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
              IK +  T NIMI   CKEGK+ KA   V +ME +G  P+ VTYNT++   C +G +E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  ++  M R+ ++ ++ T  +++  +C + +L+EA  +     ++G     V Y TLI
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+      + A    DEM ++ I P+  TYN++I  L    +T++A  M+ E+ + G+ 
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+N +I+G+C     +KA   H++M+    KP   T   LL  L ++  +++A   
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F+    +G   D + +N LI   C    ++ AF LL +M+  K+ PD  T+  I      
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++EEA++    M   G                 I P  IS++  I+ +  +G  KDA 
Sbjct: 514 EGKVEEARELFDEMKRRG-----------------IKPDHISFNTLISGYSRRGDIKDAF 556

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++  E    G      TY  L+ GL K ++
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 204/407 (50%), Gaps = 19/407 (4%)

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           D  G K +++  + +IK  C   + D+A +    M+E G  P   T N+L+    K    
Sbjct: 144 DRLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E A+ +   M R  +K +  T N +++ LC E KL +A   +      G   + V+Y T+
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           + GY    +   A  +   MK ++I P +FTY ++I G+ + G+ E+A  +  E++Q G+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P    +NT+I GFC++G ++ A  + ++M++K   P + T N L+  L  E   ++A  
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             +    KG + D++TYN LI+  C+    + AF L  EM    + P + TY ++   L 
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442

Query: 442 ESGRLEEA----QKFTS------IMVETGKINHQVVQPNTSKTPE--------EIDPSSI 483
           +  R++EA    +K TS      +++    I+      N     E        ++ P  +
Sbjct: 443 KKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV 502

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +++  +  HC +G+ ++A ++F+E +++GI  +  ++  L++G  +R
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRR 549



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 158/320 (49%), Gaps = 18/320 (5%)

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           R G K ++I  + ++ + C   + DEA+    +  ++G      +  +L++ + +  +  
Sbjct: 145 RLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTE 203

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  L+ EM   +I  S +T+N MI  L + GK ++A D +  +  SG+ P+  T+NTI+
Sbjct: 204 AAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG+CS G+VE A      M  +  +PD  T   L+SG+C++G LE+A K F   + KG  
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLR 323

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             +V YNTLI   C +  L+ A     EM +K + P   TY ++  AL    R +EA+  
Sbjct: 324 PSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECM 383

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              + E G                 I P +I+Y+  IN +C     K A  + +E    G
Sbjct: 384 IKEIQEKG-----------------ISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 513 IAINKSTYMNLMNGLIKRRK 532
           I   K TY +L++ L K+ +
Sbjct: 427 IKPTKKTYTSLLHVLSKKNR 446



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 110/203 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   TY ++L  L KK ++ E  DL   +  +G++P+   +N L+ G+C    
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSN 481

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K A  ++  M + K  PD  T+N ++ G C  G +EEA  L  EM+   + PD +++NT
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +   G   +AF++ +E+ + G  P  +T+N +++  CK  + D A ++++ M   G
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601

Query: 181 FSPDCVTYNTLIDANCKAGNMEE 203
            +PD  TY TLI+   K    +E
Sbjct: 602 MTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 17/252 (6%)

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           ++R    S+  ++ +I       + ++A +    + + G++P   T N+++  F    + 
Sbjct: 143 RDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E A   + +M     K  + T NI+++ LC+EG L+KA  F       G   + VTYNT+
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           +   C   R+E A  +L+ M+ +K+ PD +TY ++ + + + GRLEEA K    MV+ G 
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG- 321

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                           + PS++ Y+  I+  C++G    A    +E  +KGI+   STY 
Sbjct: 322 ----------------LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYN 365

Query: 522 NLMNGLIKRRKS 533
           +L++ L   +++
Sbjct: 366 SLIHALFMEQRT 377


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 243/462 (52%), Gaps = 3/462 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G   DN T + +L+ L K+GK+ +  ++L  + + GLVP    YN +V+GYC++G + 
Sbjct: 235 GKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMD 294

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A+  ++ M      P+   +N +I+ +C   M+++A    K+M    + P V TYN LI
Sbjct: 295 RAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILI 354

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + +         F++++E++E+G KPN +++  +I   CK+GKI +A  ++R+M   G  
Sbjct: 355 DGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVL 414

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+   YN LID +C  G + EA R  D M + G+    +T N+++  LC   KL EA  +
Sbjct: 415 PNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEM 474

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               +  G+  D ++Y +LI+GY     + + L+L++ MK+  + P+  T++ +I G S+
Sbjct: 475 FFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK 534

Query: 303 SG-KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            G K ++   + NE+LQ  + PD   +N +IH +   G V+KA     +MV+   +PD  
Sbjct: 535 EGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNK 592

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+ G  +EG L +          KG   ++ TY+ LI   C  +    A+    EM
Sbjct: 593 TYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREM 652

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            E    P+      + T L + GRL+EAQ   S M+  G  N
Sbjct: 653 LENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMDN 694



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/555 (27%), Positives = 273/555 (49%), Gaps = 52/555 (9%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+   YN ++  L K+ ++ +   L  +M  + LVPNR T+N L+ GYCK G +  A+ 
Sbjct: 98  VPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIG 157

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M + K  P + T+N L++G C A  +EEA  +  E++    +PD  TY+ + +   
Sbjct: 158 LRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLL 217

Query: 127 ESGRSM-EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           +S      A  L  E    G+K +  T +I++   CKEGK++KA ++++++ E+G  P  
Sbjct: 218 KSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGE 277

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V YNT+++  C+ G+M+ A   ++ M  +GL+ N I  N+++   C  + +D+A   +  
Sbjct: 278 VIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKK 337

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +G      +Y  LI GY R    +R  ++ +EM+E    P+  +Y ++I  L + GK
Sbjct: 338 MVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGK 397

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  +L +++  G++P+   +N +I G C+ G++ +AL+F ++M +      IVT N 
Sbjct: 398 ILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNS 457

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS---------------------- 403
           L+ GLC+ G L++A + F      G   D +TYN+LIS                      
Sbjct: 458 LIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLG 517

Query: 404 ------------SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
                       S C +  ++    L +EM +  L PDR  Y A+     E+G +++A  
Sbjct: 518 LKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFS 577

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               MV+ G                 + P + +Y+  I  H  +G+  +   + ++ + K
Sbjct: 578 LQKEMVDMG-----------------VRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620

Query: 512 GIAINKSTYMNLMNG 526
           G+     TY  L+ G
Sbjct: 621 GLIPEADTYSLLIQG 635



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 270/529 (51%), Gaps = 24/529 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP       I+++L +  K + V DL  +M   G  P++  Y   +    KLG LK A
Sbjct: 26  GRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLA 85

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M + + M + K +P+V+ YN+LI G C    + +A +L  EM    L+P+ VT+NTLI+ 
Sbjct: 86  MELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDG 145

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++G    A  L + + +  ++P+ +T N ++   CK  +I++A  ++  ++ NGF PD
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPD 205

Query: 185 CVTYNTLIDANCK----AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             TY+ + D   K    AG   + +R  + +G KG+K++  T + +L+ LC E K+++A 
Sbjct: 206 GFTYSIIFDGLLKSDDGAGAALDLYR--EAIG-KGVKIDNYTCSILLNGLCKEGKVEKAE 262

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L S  + G    EV Y T++ GY +    +RA+   ++M+ R + P+   +N++I   
Sbjct: 263 EVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKF 322

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +    ++A + + +++  G+ P   T+N +I G+       +  Q   +M E   KP++
Sbjct: 323 CEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNV 382

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++   L++ LC++G + +A    R  + +G   ++  YN LI   C   +L +A     E
Sbjct: 383 ISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDE 442

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +  +G    TY ++   L + G+L+EA++   ++  TG                   P
Sbjct: 443 MSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC-----------------P 485

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I+Y+  I+ + + G  +  L+++E  ++ G+    +T+  L++G  K
Sbjct: 486 DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK 534



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 228/465 (49%), Gaps = 18/465 (3%)

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M Q   LP      M++     +   +    L KEM  L   PD + Y   +    + 
Sbjct: 20  DFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKL 79

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A +L + +    + PN   +N++I   CKE +I  A K+   M      P+ VT+
Sbjct: 80  GDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTLID  CKAG ++ A  + + M ++ ++ + IT N++L  LC  ++++EA  +LN    
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199

Query: 249 RGYYLDEVSYGTLITGYFR-DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            G+  D  +Y  +  G  + D+ A  AL L+ E   + +    +T + ++ GL + GK E
Sbjct: 200 NGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A ++L  L++ G++P E  +NTI++G+C  G +++A+    +M  +  +P+ +  N ++
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
              C   +++KA ++ +  + KG A    TYN LI    +       F +L EMEE    
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEK 379

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  +Y ++   L + G++ EA+     MV  G      V PN +            Y+ 
Sbjct: 380 PNVISYGSLINCLCKDGKILEAEMVLRDMVGRG------VLPNAN-----------IYNM 422

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            I+  C+ G+ ++AL+ F+E  + GI     TY +L+ GL K  K
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 207/407 (50%), Gaps = 3/407 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ + +N+++D   +   +++  + +  M  +G+ P+  TYNIL+ GY +L  
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
                ++++ M +N   P+V +Y  LIN  C  G + EA  + ++M    +LP+   YN 
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G+  EA +  DE+ ++GI    VT+N +IK  CK GK+ +A ++   +   G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TYN+LI     AGN ++   + + M + GLK    T + ++   C ++ +    
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKE 541

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N   +     D V Y  +I  Y       +A  L  EM +  + P   TYN++I G 
Sbjct: 542 TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK  +  D+++++   G+IP+  T++ +I G C       A  ++ +M+E  F P++
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             CN L +GL ++G L++A       I  G  +D++  N  +S + K
Sbjct: 662 CICNELSTGLRKDGRLQEAQSICSEMIANG--MDNLDTNEDLSDVAK 706



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 204/419 (48%), Gaps = 19/419 (4%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ES    +  +L D + + G  P+     ++++   +  K D    + + M   GF PD +
Sbjct: 8   ESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKL 67

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y   + A  K G+++ A  + + M R+ +  N    N ++  LC EK++ +A  L    
Sbjct: 68  VYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEM 127

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           S R    + V++ TLI GY +  + + A+ L + MK+ ++ PS  T+N+++ GL ++ + 
Sbjct: 128 SVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRI 187

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           E+A  MLNE+  +G +PD  T++ I  G   S+     AL  + + + K  K D  TC+I
Sbjct: 188 EEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSI 247

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL+GLC+EG +EKA +  +S +  G     V YNT+++  C+   ++ A   + +ME + 
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-------------KINHQVVQPNTS 472
           L P+   + ++     E   +++A+++   MV  G                   V     
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 473 KTPEEID-----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           +  EE++     P+ ISY   IN  C  G+  +A  +  +   +G+  N + Y  L++G
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 17/239 (7%)

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+S    Q  ++ + + Q G +P       I+       + +  L    +MV   F+PD 
Sbjct: 7   SESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDK 66

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +     +    + G L+ A++ F +   +    +   YN LI  LCKE+R+ DA  L  E
Sbjct: 67  LVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGE 126

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L P+R T+  +     ++G ++ A      M                   E+++P
Sbjct: 127 MSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM-----------------KKEKVEP 169

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           S I+++  ++  C   R ++A  +  E +  G   +  TY  + +GL+K       A+D
Sbjct: 170 SIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALD 228


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 258/520 (49%), Gaps = 29/520 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P   + N +L  L K G+ +  R    DM   G+  +  TYNI++   CK G 
Sbjct: 12  MRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGD 71

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +   M +    PD+ TYN LI+G    G+L+E   + ++M+     PDV+TYN 
Sbjct: 72  LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 131

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  R  +AF+ + E+  +G+KPN VT++  I  +CKEG + +A K   +M    
Sbjct: 132 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 191

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  TY +LIDANCKAGN+ EA ++++ + + G+K+N +T   +L  LC E ++ EA 
Sbjct: 192 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 251

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  +    G   ++ +Y  L+ G+ + ++   A  +  EMKE+ I P    Y  ++WGL
Sbjct: 252 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 311

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               + E+A  ++ E+ +SG+  +   + T++  +   GQ  +AL    +M++       
Sbjct: 312 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------- 364

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                L+ GLC+    E A K F   + KG   D + Y  LI    K   L++A  L   
Sbjct: 365 -----LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 419

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M E  +  D + Y A+   L  SG++++A+     M+  G +                 P
Sbjct: 420 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL-----------------P 462

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             + Y   I ++ + G+  +AL++  E  ++G+    S +
Sbjct: 463 DEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 502



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 218/439 (49%), Gaps = 6/439 (1%)

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
           MLEEA     +M   ++ P   + N L++R  + GR   + K   ++   GIK +  T+N
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           IMI + CKEG ++ A  +   M+E GF+PD VTYN+LID + K G ++E   + + M   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
               + IT N +++  C  +++ +A+  L+     G   + V+Y T I  + ++     A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           +K + +M+   + P+ FTY ++I    ++G   +A+ ++ E+LQ+G+  +  T+  ++ G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C EG++++A +    M+     P+  T   L+ G  +   +E A    +    K    D
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            + Y T++  LC E RLE+A  L+ E++E  +  +   Y  +  A  +SG+  EA     
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360

Query: 455 IMVE--TGKINHQVVQPNTSKTPEEID----PSSISYSEKINEHCSQGRYKDALQIFEET 508
            M++   G   +   +       E +D    P  I+Y+  I+ +   G  ++AL + +  
Sbjct: 361 EMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 420

Query: 509 RQKGIAINKSTYMNLMNGL 527
            + G+ ++   Y  L+ GL
Sbjct: 421 IEIGMELDLHAYTALIWGL 439



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 184/390 (47%), Gaps = 8/390 (2%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P   + N ++    K G+ D + K  ++M   G      TYN +ID  CK G++E A  +
Sbjct: 19  PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
              M   G   + +T N+++        LDE   +           D ++Y  LI  + +
Sbjct: 79  FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
            E+  +A +   EMK   + P+  TY+  I    + G  ++AI    ++ +  + P+E T
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           + ++I   C  G + +AL+   ++++   K ++VT   LL GLC EG +++A + FR+ +
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G A +  TY  L+    K + +E A  +L EM+EK + PD   Y  I   L    RLE
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 318

Query: 448 EAQKFTSIMVETGKINHQVVQPNT-----SKTPEEIDPSSI--SYSEKINEHCSQGRYKD 500
           EA+     + E+G IN   V   T      K+ +  +  ++     + ++  C    ++ 
Sbjct: 319 EAKLLIGEIKESG-INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEV 377

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           A ++F+E   KG+  +K  Y  L++G +K 
Sbjct: 378 AKKLFDEMLDKGMMPDKIAYTALIDGNMKH 407



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 17/263 (6%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           + + + K + +M    I  S FTYN MI  L + G  E A  +  ++ ++G  PD  T+N
Sbjct: 36  RGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYN 95

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++I G    G +++ +    +M +    PD++T N L++  C+   + KA +F       
Sbjct: 96  SLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 155

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + VTY+T I + CKE  L++A     +M    L P+ +TY ++  A  ++G L EA
Sbjct: 156 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 215

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            K    +++ G                 I  + ++Y+  ++  C +GR K+A ++F    
Sbjct: 216 LKLVEEILQAG-----------------IKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
             G+A N+ TY  L++G IK ++
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKE 281



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 23/168 (13%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDM----------------KK-------QGLVPNRTT 47
           V Y T++DA FK G+  E   LL +M                KK       +G++P++  
Sbjct: 337 VIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA 396

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y  L+ G  K G L+EA+ + D M +     D+  Y  LI G  ++G +++A  L  EM 
Sbjct: 397 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI 456

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
              +LPD V Y  LI +++  G+  EA +L +E+ + G+      H +
Sbjct: 457 GKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 504


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 253/525 (48%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +T+NT+++ L KKGK+ E   +LS + +  L P+  TY  L+ G+C+   L  A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M +    P+  TY+ LING CN G ++EA  + +EM    + P V TY   I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                   EA +L+  + + G +PN  T+  +I    + GK++ A  +   M + G  P+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  C  G    A ++   M   G   NT T N I+  LC    +++A +L  
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G     V+Y TLI GY      N A +L D MKE    P  +TYN ++ G S+ G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A     E+++ G+ P+  ++  +I G   +G+V+ AL    +M E    P++ + N
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++GL +E    +A K     + +G   + +TY TLI  LC+  R + AF +  +ME++
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           K  P+ YTY+++   L + G+ +EA+     M   G                 + P  ++
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG-----------------LAPDEVT 655

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  I+     GR   A  +       G   N  TY  L+ GL K
Sbjct: 656 FTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 219/390 (56%), Gaps = 2/390 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++  L + GKL     L   M K+GLVPN  TYN L++  C  G 
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+++   M  + SL +  TYN +I G C  G +E+A  L ++M  +  LP VVTYNT
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +   G    A +L+D + E+G +P+  T+N ++  + K GK++ A    + M E G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ V+Y  LID + K G ++ A  ++  M   G   N  + N +++ L  E +  EA 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   ++G   + ++Y TLI G  R+ +   A K++ +M++R+ +P+ +TY+++I+GL
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK ++A  +L E+ + G+ PDE TF ++I GF   G+++ A     +MV+   KP+ 
Sbjct: 629 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNY 688

Query: 361 VTCNILLSGLCREGIL--EKALKFFRSWIL 388
            T ++LL GL +E +L  EK      ++ L
Sbjct: 689 RTYSVLLKGLQKECLLLEEKIFPLVDNYFL 718



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/451 (32%), Positives = 239/451 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P++VTY+T+++ L  +G+++E  D+L +M ++G+ P   TY + ++  C +   +EA
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V  M +    P+V TY  LI+G    G LE A  L  +M    L+P+ VTYN LIN 
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR   A K+   ++ HG   N  T+N +IK  C  G I+KA  +   M + G  P 
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI+     GN+  A R++D+M   G + +  T N ++       KL+ A     
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + VSY  LI G+ +D K + AL L   M+E    P+  +YNA+I GLS+  
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A  + +++++ G++P+  T+ T+I G C  G+ + A +  + M ++   P++ T +
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GLC+EG  ++A    +    KG A D VT+ +LI       R++ AF LL  M + 
Sbjct: 623 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM 682

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
              P+  TY+ +   L +   L E + F  +
Sbjct: 683 GCKPNYRTYSVLLKGLQKECLLLEEKIFPLV 713



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 245/509 (48%), Gaps = 17/509 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           ++  V D L+++   G   +  + N L+    K   ++ A  +   M  +   P + T+N
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            LIN     G + EA  +  ++    L PDV TY +LI     +     AF + D + + 
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 262

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G  PN+VT++ +I   C EG++D+A  ++  M E G  P   TY   I A C   + EEA
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M ++G + N  T   ++  L    KL+ A  L +   K G   + V+Y  LI  
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                + + ALK++  M+    + +T TYN +I GL   G  E+A+ +  ++L+ G +P 
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+NT+I+G+ ++G V  A +  + M E   +PD  T N L+SG  + G LE A  +F+
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             +  G   + V+Y  LI    K+ +++ A  LL  MEE    P+  +Y A+   L +  
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           R  EA+K    MVE G +                 P+ I+Y+  I+  C  GR + A +I
Sbjct: 563 RFSEAEKICDKMVEQGLL-----------------PNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           F +  ++    N  TY +L+ GL +  K+
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 182/375 (48%), Gaps = 17/375 (4%)

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           +MIK    E +I +    +  +   GF     + NTL+    K   +E A  +   M   
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G++ + +T NT+++ L  + K+ EA ++L+   +     D  +Y +LI G+ R+   + A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             ++D M +    P++ TY+ +I GL   G+ ++A+DML E+++ G+ P   T+   I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C+    E+A++   +M ++  +P++ T   L+SGL R G LE A+  +   + +G   +
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +VTYN LI+ LC   R   A  +   ME      +  TY  I   L   G +E+A     
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M++ G +                 P+ ++Y+  IN + ++G   +A ++ +  ++ G  
Sbjct: 433 KMLKMGPL-----------------PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 515 INKSTYMNLMNGLIK 529
            ++ TY  L++G  K
Sbjct: 476 PDEWTYNELVSGFSK 490



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 119/300 (39%), Gaps = 53/300 (17%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           +++R   P+      MI       +  +  D LNE+   G      + NT++        
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 178

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLS-------------------------------- 368
           VE A   + +M+    +P ++T N L++                                
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 369 ---GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
              G CR   L+ A   F   + +G   +SVTY+TLI+ LC E R+++A  +L EM EK 
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 426 LGPDRYTYAAIHTALV----------------ESGRLEEAQKFTSIMVETGKINHQVVQP 469
           + P  YTY    TAL                 + G     Q +T+++    ++    V  
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 470 NTSK--TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   E + P++++Y+  INE C  GR+  AL+IF      G   N  TY  ++ GL
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 276/527 (52%), Gaps = 25/527 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TY+T++  L K+ +L+   DLL +M + G+ P+   YN L+ G  K G  ++ MRV
Sbjct: 191 PDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRV 250

Query: 68  VDLMTQNK-SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            D + ++  + P++ TYN++++G C  G  +E   + + M +  L PDV+TY  LI+   
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP--D 184
            SG    A ++  E+ + G+  +A  +N ++K +C+ G++ +A K     +  GF+   +
Sbjct: 311 RSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF---WDSAGFAGLRN 367

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             TYN +I     +G ++EA  + D++ +      +T+T  T++H LC     ++A+ + 
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             A   G  LD  SY ++I G     +   A+K++++M +    P++  YNA+I G  Q 
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQV 487

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            +T  A+ + +++  +G  P   T+NT+I G C   + ++A     +MVE  F PDI T 
Sbjct: 488 YRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GL  +  ++ AL  ++  + KG  VD + +N LI  LC   ++++A  + S+M+E
Sbjct: 548 GSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKE 607

Query: 424 KK-LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           KK   P+  TY  +   L E+G +++A    + + E G                 ++P  
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG-----------------LEPDI 650

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ISY+ +I   CS  R  + +Q+ +E   +GI     T+  L+  +IK
Sbjct: 651 ISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 222/445 (49%), Gaps = 3/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN +LD L K G+  EV ++   M    L P+  TY IL+ G C+ G +  A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV   + +   + D   YN L+ G+C AG ++EA++   +      L ++ TYN +I  
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKG 377

Query: 125 FFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F+SG   EA +L D L++     P+ VT   +I   C+ G  +KA  I      +G   
Sbjct: 378 LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL 437

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  +Y+++I+  C  G + +A ++ + M + G K N+   N ++   C   +  +A  + 
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  +  G     ++Y TLI G  + EK   A  +  EM E    P   TY ++I GL   
Sbjct: 498 SKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD 557

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPDIVT 362
            K + A+ +  ++L  G+  D    N +IHG CS G+V++AL   + M E K+  P++VT
Sbjct: 558 KKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVT 617

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ GL   G ++KA   + S    G   D ++YNT I  LC   R+ +   LL E+ 
Sbjct: 618 YNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL 677

Query: 423 EKKLGPDRYTYAAIHTALVESGRLE 447
            + + P   T+  +  A+++ G ++
Sbjct: 678 SRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 234/515 (45%), Gaps = 27/515 (5%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN---- 74
           A+     L+  R L S +   G  P   ++N L+  + +     +A      ++      
Sbjct: 96  AIMPDAALDAFRALPSIL---GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGR 152

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           +  P++ TYN+++   C  G L+ A  L   +   ++ PD +TY+TL+    +  R   A
Sbjct: 153 RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHA 212

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLID 193
             L+DE+   G++P+ V +N ++    K G+ +K  ++   + ++ G  P+  TYN ++D
Sbjct: 213 LDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK G  +E   + + M    L+ + IT   ++H LC    +D A  + +   K G  +
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D   Y +L+ G+ +  +   A K WD      +  +  TYN MI GL  SG  ++AI++ 
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 314 NELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + L +    IPD  TF T+IHG C  G   KA     +      + D+ + + +++GLC 
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G L  A+K +      G   +S  YN LIS  C+  R  DA  + S+M +    P   T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +   L ++ + +EA      MVE G                   P   +Y   I   
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENG-----------------FTPDITTYGSLIRGL 554

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            S  +  DAL I+++   KG+ ++   +  L++GL
Sbjct: 555 FSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 180/342 (52%), Gaps = 2/342 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWL 61
           GF  L +  TYN ++  LF  G ++E  +L   ++K    +P+  T+  L+ G C+ G+ 
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFA 420

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  + +    +    DV++Y+ +ING CN G L +A ++ ++M+     P+   YN L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ F +  R+ +A ++  ++ ++G  P  +T+N +I   CK  K  +A  + R M ENGF
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-Y 240
           +PD  TY +LI        +++A  +   +  KGLK++ +  N ++H LC   K+DEA +
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +  +   K+    + V+Y TL+ G +     ++A  LW  + E  + P   +YN  I GL
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
               +  + I +L+E+L  G+IP   T+N ++      G ++
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 224/490 (45%), Gaps = 60/490 (12%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           ++++ +  A M + A    + + S L   P + ++N L++ F  + R  +A      L  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASL-S 146

Query: 144 HG-----IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           HG     I PN  T+NI+++  C  G +D+A  +  ++     +PDC+TY+TL+    K 
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQ 206

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK-RGYYLDEVS 257
             ++ A  ++D M R G++ + +  N +L       + ++   + +   K  G   +  +
Sbjct: 207 DRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  ++ G  +  +     ++W+ M    + P   TY  +I GL +SG  + A  + +E++
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQF--------------HNKMVEKSFK------ 357
           ++G++ D   +N+++ GFC  G+V++A +F              +N M++  F       
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDE 386

Query: 358 ---------------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
                          PD VT   L+ GLC+ G   KA   F    + GK +D  +Y+++I
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           + LC   RL DA  +  +M++    P+ + Y A+ +   +  R  +A +  S M + G  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG-- 504

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                            P+ I+Y+  I+  C   +Y++A  +  E  + G   + +TY +
Sbjct: 505 ---------------CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 523 LMNGLIKRRK 532
           L+ GL   +K
Sbjct: 550 LIRGLFSDKK 559



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P++  YN ++    +  + ++   + S M   G  P   TYN L+ G CK   
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA  V   M +N   PD+ TY  LI G  +   +++A  + K++    L  DV+ +N 
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNI 584

Query: 121 LINRFFESGRSMEAFKLIDELDE-HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LI+    +G+  EA  +  ++ E     PN VT+N ++    + G IDKA  +  ++ E+
Sbjct: 585 LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITED 644

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           G  PD ++YNT I   C    + E  +++D +  +G+    IT N ++  +
Sbjct: 645 GLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/560 (27%), Positives = 276/560 (49%), Gaps = 28/560 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C P   ++N I++ L + G  N+   +   M+ +G+  +  TY I +  +CK   
Sbjct: 102 MDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTAR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R++  M +     +   Y  ++ G  ++G  + A  L  EM +  L PDVV +N 
Sbjct: 162 PYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNK 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK--------- 171
           L++   + G   E+ +L+ ++ + G+ PN  T NI ++  C+EG +D+A +         
Sbjct: 222 LVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEE 281

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
            +R M   GF PD +TYN++ID  CK G +++A R++     KG K +  T  ++++  C
Sbjct: 282 YLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFC 341

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
            +   D A  +      +G     V Y TLI G  +      AL+L +EM E   +P+ +
Sbjct: 342 KDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIW 401

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TYN +I GL + G    A  ++++ +  G  PD  T+NT+I G+C + +++ A +  N+M
Sbjct: 402 TYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
             +   PD++T N LL+GLC+ G  E+ ++ F++   KG   + +TYN ++ SLCK +++
Sbjct: 462 WSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKV 521

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN- 470
            +A  LL EM+ K L PD  ++  + T   + G ++ A +    M +   + H     N 
Sbjct: 522 NEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNI 581

Query: 471 -TSKTPEEI-----------------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             S   E++                 DP + +Y   I+  C  G      +   E  +K 
Sbjct: 582 IVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641

Query: 513 IAINKSTYMNLMNGLIKRRK 532
              + +T+  ++N L  + K
Sbjct: 642 FIPSLTTFGRVLNCLCVKDK 661



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 249/494 (50%), Gaps = 25/494 (5%)

Query: 6   CL-PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           CL PD V +N ++  L KKG + E   LL  + K+G+ PN  T+NI V G C+ G L  A
Sbjct: 211 CLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRA 270

Query: 65  MR---VVDL------MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           +R   VV+       M      PD  TYN +I+G+C  GM+++A R+ K+       PD 
Sbjct: 271 VRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDE 330

Query: 116 VTYNTLINRFFESG---RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
            TY +LIN F + G   R+M  FK  D L + G++P+ V +N +IK   ++G I  A ++
Sbjct: 331 FTYCSLINGFCKDGDPDRAMAVFK--DGLGK-GLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  M ENG  P+  TYN +I+  CK G + +A  ++D    KG   +  T NT++   C 
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           + KLD A  ++N    +G   D ++Y TL+ G  +  K+   ++++  M+E+   P+  T
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN ++  L ++ K  +A+D+L E+   G+ PD  +F T+  GFC  G ++ A Q   +M 
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM- 566

Query: 353 EKSFK--PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           EK +       T NI++S    +  +  A+K F      G   D+ TY  +I   CK   
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGN 626

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +   +  L E  EK+  P   T+  +   L    ++ EA     +M++ G      + P 
Sbjct: 627 ITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKG------IVPE 680

Query: 471 TSKTPEEIDPSSIS 484
           T  T  E D   ++
Sbjct: 681 TVNTIFEADKKVVA 694



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 224/434 (51%), Gaps = 6/434 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD++TYN+I+D   KKG + +   +L D   +G  P+  TY  L++G+CK G    AM V
Sbjct: 293 PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAV 352

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
                     P +  YN LI G    G++  A +L  EM     LP++ TYN +IN   +
Sbjct: 353 FKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCK 412

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A  L+D+    G  P+  T+N +I  YCK+ K+D A ++V  M   G +PD +T
Sbjct: 413 MGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVIT 472

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL++  CKAG  EE   +   M  KG   N IT N I+ +LC  KK++EA  LL    
Sbjct: 473 YNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMK 532

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKT 306
            +G   D VS+GTL TG+ +    + A +L+  M K+  +  +T TYN ++   S+    
Sbjct: 533 SKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNM 592

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A+ + + +  SG  PD  T+  +I GFC  G + +  +F  + +EK F P + T   +
Sbjct: 593 NMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRV 652

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L+ LC +  + +A+      + KG   ++V  NT+  +   ++++  A  +L E   KK 
Sbjct: 653 LNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEA---DKKVVAAPKILVEDLLKKG 707

Query: 427 GPDRYTYAAIHTAL 440
               YTY  ++  +
Sbjct: 708 HIAYYTYELLYDGI 721



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 244/533 (45%), Gaps = 37/533 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPN---RTTYNILVSGYCKLGWLKEAMRVV 68
           TY  I+  L   G+  E+  LLS+M++   V N      Y   +  Y + G ++EA+   
Sbjct: 42  TYKCIVQKLGHHGEFEEMEKLLSEMREN--VNNALLEGAYIEAMKNYGRKGKVQEAVDTF 99

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P V ++N ++N     G   +A ++   M    +  DV TY   I  F ++
Sbjct: 100 ERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKT 159

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R   A +L+  + E G   NAV +  ++      G+ D A ++   M      PD V +
Sbjct: 160 ARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAF 219

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD---------EA 239
           N L+   CK G + E+ R++  + ++G+  N  T N  +  LC E  LD         EA
Sbjct: 220 NKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEA 279

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRD---EKANRALKLWDEMKERQIMPSTFTYNAM 296
              L      G+  D+++Y ++I GY +    + ANR LK   +   +   P  FTY ++
Sbjct: 280 EEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK---DAVFKGFKPDEFTYCSL 336

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I G  + G  ++A+ +  + L  G+ P    +NT+I G   +G +  ALQ  N+M E   
Sbjct: 337 INGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGC 396

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P+I T N++++GLC+ G +  A       I KG   D  TYNTLI   CK+ +L+ A  
Sbjct: 397 LPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATE 456

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           +++ M  + + PD  TY  +   L ++G+ EE  +    M E G                
Sbjct: 457 MVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG---------------- 500

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              P+ I+Y+  ++  C   +  +A+ +  E + KG+  +  ++  L  G  K
Sbjct: 501 -CTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCK 552



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 201/447 (44%), Gaps = 32/447 (7%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI---KWYCKEGKIDKACKIV 173
           TY  ++ +    G   E  KL+ E+ E+    NA+     I   K Y ++GK+ +A    
Sbjct: 42  TYKCIVQKLGHHGEFEEMEKLLSEMREN--VNNALLEGAYIEAMKNYGRKGKVQEAVDTF 99

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M+     P   ++N +++   + G   +A ++   M  +G++ +  T    + + C  
Sbjct: 100 ERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKT 159

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            +   A  LL +  + G   + V+Y T++ G +   + + A +L+DEM  R + P    +
Sbjct: 160 ARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAF 219

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL-------- 345
           N ++  L + G   ++  +L ++L+ G+ P+  TFN  + G C EG +++A+        
Sbjct: 220 NKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEA 279

Query: 346 -QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            ++  KMV   F+PD +T N ++ G C++G+++ A +  +  + KG   D  TY +LI+ 
Sbjct: 280 EEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLING 339

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---- 460
            CK+   + A  +  +   K L P    Y  +   L + G +  A +  + M E G    
Sbjct: 340 FCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPN 399

Query: 461 ------KINHQVVQPNTSKTPEEID--------PSSISYSEKINEHCSQGRYKDALQIFE 506
                  IN        S     +D        P   +Y+  I+ +C Q +   A ++  
Sbjct: 400 IWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVN 459

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKS 533
               +G+  +  TY  L+NGL K  KS
Sbjct: 460 RMWSQGMTPDVITYNTLLNGLCKAGKS 486



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNE-VRDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           M+  GC PDN TY  ++D   K G + +  + LL +M+K+  +P+ TT+  +++  C   
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR-FIPSLTTFGRVLNCLCVKD 660

Query: 60  WLKEAMRVVDLMTQNKSLPD 79
            + EA+ ++ LM Q   +P+
Sbjct: 661 KVHEAVGIIHLMLQKGIVPE 680


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 247/459 (53%), Gaps = 2/459 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   + +T N ++++     ++N    + + + K G  P+  TY  L+ G C  G 
Sbjct: 75  MELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQ 134

Query: 61  LKEAMRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +KE++   D L++Q   L  V +Y  LING C  G    A RL +++E     PDVV YN
Sbjct: 135 VKESLNFHDRLVSQGIKLDHV-SYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYN 193

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+I+   +     +AF L  E+ E  + PN VT+  +I  +C  G++DKA  ++  M   
Sbjct: 194 TIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLK 253

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P+  T+NTL+D  CK G M EA  ++ VM ++G+  +  T N ++      K+  +A
Sbjct: 254 NVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKA 313

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + N  ++ G   D  SY  +I+G  + +  + A+ L++ M+   ++P    Y+++I G
Sbjct: 314 KNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG 373

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +SG+   A+  ++E+   G  P+  T+ ++I   C   QV+KA+    K+ ++  + +
Sbjct: 374 LCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQAN 433

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + T NIL+ GLC++G L  A K F+  ++KG  VD VTY+ +I+ LCKE   ++A  LLS
Sbjct: 434 MYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLS 493

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           +ME+K   PD   Y  I  A  E    ++A+K    M++
Sbjct: 494 KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 235/483 (48%), Gaps = 17/483 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  + +  IL +L K      V  L   M+  G+  N  T NIL++ YC L  +  A  V
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              + +    PD+ TY  LI G C  G ++E+      + S  +  D V+Y TLIN   +
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G++  A +L+ +++    +P+ V +N +I   CK+  +  A  +   M E    P+ VT
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +LI   C  G +++AF +++ M  K +  N  T NT++  LC E K+ EA  L+    
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   D  +Y  L+ GYF  ++A +A  +++ M +  +     +Y+ MI GLS+    +
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+D+   +    +IPD   ++++I G C  G++  AL++ ++M ++   P+++T   L+
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   ++KA+   +    +G   +  TYN L+  LCK+ RL DA  +  ++  K   
Sbjct: 407 DALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHN 466

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            D  TY+ +   L +    +EA    S M + G +                 P +I+Y  
Sbjct: 467 VDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCV-----------------PDAIAYET 509

Query: 488 KIN 490
            IN
Sbjct: 510 IIN 512



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 223/449 (49%), Gaps = 17/449 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T N+LIN +C+   +  AF +  ++  L   PD++TY TLI     +G+  E+    D L
Sbjct: 86  TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
              GIK + V++  +I   CK G+   A +++R +E     PD V YNT+ID  CK   +
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLV 205

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            +AF +   M  K +  N +T  ++++  C   +LD+A+ LLN    +    +  ++ TL
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           + G  ++ K   A  L   M +  + P  FTYNA++ G     +  +A ++ N + Q G+
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV 325

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
             D  +++ +I G      +++A+     M  ++  PD+V  + L+ GLC+ G +  ALK
Sbjct: 326 TCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
           +      +G+  + +TY +LI +LCK  +++ A  LL +++++ +  + YTY  +   L 
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLC 445

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           + GRL +AQK    ++  G   H V                ++YS  IN  C +  + +A
Sbjct: 446 KDGRLTDAQKVFQDLLMKG---HNV--------------DVVTYSIMINGLCKESLFDEA 488

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           L +  +   KG   +   Y  ++N   ++
Sbjct: 489 LTLLSKMEDKGCVPDAIAYETIINAFFEK 517



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 211/434 (48%), Gaps = 17/434 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L +A      M  ++  P ++ +  ++    ++        L   ++ HGI+ N +T NI
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  YC   +I+ A  +   + + G+ PD +TY TLI   C  G ++E+    D +  +G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +K++ ++  T+++ LC   +   A  LL          D V Y T+I G  +D+    A 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L+ EM E+++ P+  TY ++I+G    G+ ++A  +LNE++   + P+  TFNT++ G 
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C EG++ +A      M+++   PD+ T N L+ G        KA   F      G   D 
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDV 329

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            +Y+ +IS L K + L++A  L   M  + + PD   Y+++   L +SGR+  A K+   
Sbjct: 330 HSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M + G       QP          P+ I+Y+  I+  C   +   A+ + ++ + +GI  
Sbjct: 390 MHDRG-------QP----------PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQA 432

Query: 516 NKSTYMNLMNGLIK 529
           N  TY  L++GL K
Sbjct: 433 NMYTYNILVDGLCK 446


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 271/525 (51%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V YN IL  L KKGK ++   +  +MK+  + PN  TYNI++   CK G ++ A
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAA 289

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V D M +    P+V T N++I+  C A  L+EA  + + M+     PD  T+ +LI+ 
Sbjct: 290 FKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDG 349

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A+++ + + +    PN V +  +I+ + K  + +   K+ + M  +G SPD
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPD 409

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +  NT +D   KAG  E+   + + +  +G   +T + + ++H+L       E Y L  
Sbjct: 410 LMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYY 469

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +   +G  LD  +Y T+I G+ +  K N+A +L +EMK     P+  TY +++ GL++  
Sbjct: 470 AMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKID 529

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E   +G+  ++  ++++I GF   G+V++A     +M++K   P++ T N
Sbjct: 530 RLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWN 589

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL GL +   + +AL  F+S        + +TY  LI+ LCK R+   AF    EM+++
Sbjct: 590 CLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQ 649

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY A+ + L +SG + +A         +G I                 P S S
Sbjct: 650 GLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGI-----------------PDSAS 692

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I       R  DA Q+FEETR KG +I+  T + L++ L K
Sbjct: 693 YNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHK 737



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 252/553 (45%), Gaps = 53/553 (9%)

Query: 15  TILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN 74
           T++    ++G+++    LL +MK      +   YN+ +  + K+G +  A +    M  N
Sbjct: 101 TLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN 160

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
             +PD  TY  ++   C A  L+EA  + ++ME  + +P    YNT+I  +  +G+  EA
Sbjct: 161 GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEA 220

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
           + L++     G  P+ V +N ++    K+GK DKA +I   M+ +   P+  TYN +I  
Sbjct: 221 YSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGM 279

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            CKAGN+E AF++ D M   GL  N  T+N ++  LC  +KLDEA  +      +    D
Sbjct: 280 LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             ++ +LI G  +  + + A ++++ M +   +P+   Y ++I    +  + E    M  
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK 399

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           E+++SG  PD    NT +      G+ EK      ++  + F PD  + +IL+  L + G
Sbjct: 400 EMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG 459

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
              +  + + +   +G  +D+  YNT+I   CK  ++  A+ LL EM+     P   TY 
Sbjct: 460 FARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYG 519

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
           ++   L +  RL+EA     ++ E  K N              I+ + + YS  I+    
Sbjct: 520 SVVDGLAKIDRLDEAY----MLFEEAKSNG-------------IELNQVIYSSLIDGFGK 562

Query: 495 QGRYKDALQIFEETRQKGIAIN-----------------------------------KST 519
            GR  +A  + EE  QKG+  N                                   + T
Sbjct: 563 VGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQIT 622

Query: 520 YMNLMNGLIKRRK 532
           Y  L+NGL K RK
Sbjct: 623 YCILINGLCKVRK 635



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 259/564 (45%), Gaps = 53/564 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P    Y T++ AL + G+ + +  L + M++ G   N      L+  + + G 
Sbjct: 52  MRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGR 111

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT--- 117
           +  A+ ++D M  N    D+  YN+ I+ +   G ++ A++   EM++  L+PD VT   
Sbjct: 112 VDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTS 171

Query: 118 --------------------------------YNTLINRFFESGRSMEAFKLIDELDEHG 145
                                           YNT+I  +  +G+  EA+ L++     G
Sbjct: 172 MMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 231

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+ V +N ++    K+GK DKA +I   M+ +   P+  TYN +I   CKAGN+E AF
Sbjct: 232 CIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAF 290

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++ D M   GL  N  T+N ++  LC  +KLDEA  +      +    D  ++ +LI G 
Sbjct: 291 KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGL 350

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +  + + A ++++ M +   +P+   Y ++I    +  + E    M  E+++SG  PD 
Sbjct: 351 GKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDL 410

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
              NT +      G+ EK      ++  + F PD  + +IL+  L + G   +  + + +
Sbjct: 411 MLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYA 470

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +G  +D+  YNT+I   CK  ++  A+ LL EM+     P   TY ++   L +  R
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           L+EA     ++ E  K N              I+ + + YS  I+     GR  +A  + 
Sbjct: 531 LDEAY----MLFEEAKSNG-------------IELNQVIYSSLIDGFGKVGRVDEAYLVM 573

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
           EE  QKG+  N  T+  L++GL+K
Sbjct: 574 EEMMQKGLTPNVYTWNCLLDGLVK 597



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 229/522 (43%), Gaps = 19/522 (3%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
            + +  +L +M   G  P   T   LV+   K   L EA  ++ +M   K  P    Y  
Sbjct: 7   FDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTT 66

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI      G  +    L  +M+ L    +V    TLI  F   GR   A  L+DE+  + 
Sbjct: 67  LIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT 126

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
              + V +N+ I  + K GK+D A K    M+ NG  PD VTY +++   CKA  ++EA 
Sbjct: 127 FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAV 186

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + + M +          NT++       K DEAY LL     +G     V+Y  ++T  
Sbjct: 187 EIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCL 246

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +  K ++AL++++EMK R  MP+  TYN +I  L ++G  E A  + + + ++G+ P+ 
Sbjct: 247 GKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNV 305

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T N +I   C   ++++A      M  K   PD  T   L+ GL ++G ++ A + +  
Sbjct: 306 RTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYER 365

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD-----RYTYAAIHTAL 440
            +   +  + V Y +LI +  K  R ED   +  EM      PD      Y         
Sbjct: 366 MLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGE 425

Query: 441 VESGR--LEE--AQKFTSIMVETGKINHQVVQPNTSKTPEEI-----DPSSI----SYSE 487
            E GR   EE  A+ F         + H +V+   ++   E+     D   +    +Y+ 
Sbjct: 426 TEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNT 485

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+  C  G+   A Q+ EE +  G      TY ++++GL K
Sbjct: 486 VIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAK 527



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 19/277 (6%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L+    +  K   A  L   M+  +  P+   Y  +I  LS+ G++++ + + N++ + G
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
              +     T+I  F  EG+V+ AL   ++M   +F  DIV  N+ +    + G ++ A 
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           KFF      G   D VTY +++  LCK  RL++A  +  +ME+ +  P  Y Y  +    
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
             +G+ +EA          G I                 PS ++Y+  +     +G+   
Sbjct: 212 GSAGKFDEAYSLLERQRAKGCI-----------------PSVVAYNCILTCLGKKGKTDK 254

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           AL+IFEE ++  +  N  TY N++ G++ +  ++  A
Sbjct: 255 ALRIFEEMKRDAMP-NLPTY-NIIIGMLCKAGNVEAA 289


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 267/545 (48%), Gaps = 33/545 (6%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL--- 58
           +G+ C P+ ++YN +++ LFK+G++++   L  +M  QG  PN  TYN ++ G CK    
Sbjct: 131 DGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAM 190

Query: 59  -------------GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
                        G L+EA+R++  M+     PDV TY++LI+ +C  G   EA  +   
Sbjct: 191 DKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDS 250

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M      PD  TY TL++ +   G  ++   L+  + + GI       NI+I+ Y K   
Sbjct: 251 MVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNET 310

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +DKA      M + GFSP+ VTY T+ID  CKAG +E+A      M  +GL  + IT  +
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++H LC   +  +   L      RG + + +   T++    ++ +   A   +D++    
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           + P   +Y  +I G    GK +++I +L  ++  G+ PD  T++ +++G+C  G+V+ AL
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL 490

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
             + +M  K  KP+ +T NI+L GL   G +  A +F+   +  G  +   TYN ++  L
Sbjct: 491 ALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL 550

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C+   +++A  +   +  K+   +  T+  +   L++ GR+ +A+   S ++ +G +   
Sbjct: 551 CENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLV--- 607

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                         P +I Y   I  H  +G  +++ ++F    + G   N  T   ++ 
Sbjct: 608 --------------PDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVR 653

Query: 526 GLIKR 530
            L+++
Sbjct: 654 KLLEK 658



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 235/476 (49%), Gaps = 16/476 (3%)

Query: 1   MEGFGCLPDNVTYNTILDAL----------------FKKGKLNEVRDLLSDMKKQGLVPN 44
           M G G  P+ VTYN+++D L                F KG+L E   LL  M   GL P+
Sbjct: 165 MLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPD 224

Query: 45  RTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK 104
             TY++L+  YCK+G   EA  + D M +    PD +TY  L++G+   G L +   L  
Sbjct: 225 VVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLA 284

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
            M    +  +   +N LI  + ++    +A     E+ + G  PN VT+  +I   CK G
Sbjct: 285 LMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAG 344

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           +++ A      M   G SPD +T+ +LI   C  G  ++  ++   M  +G+  N I LN
Sbjct: 345 RVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLN 404

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
           TI+ +LC E ++ EA+   +     G   D VSY  LI GY  D K + ++KL   M   
Sbjct: 405 TIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            + P   TY+A++ G  ++G+ + A+ +  E+    + P+  T+N I+HG    G+V  A
Sbjct: 465 GLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAA 524

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +F+ K+V+   +  I T NI+L GLC    +++AL+ F+    K   ++  T+N +I  
Sbjct: 525 REFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVG 584

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L K  R+ DA  L S +    L PD   Y  +  + +E G LEE+ +    M + G
Sbjct: 585 LLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNG 640



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 251/530 (47%), Gaps = 81/530 (15%)

Query: 64  AMRVVDLMTQ---NKSLPDVWTYNMLINGWCNAGMLEEAF--RLRKEMESLKLL------ 112
           A+ + + M Q   NK   D  T+ +LI  +CN G+L+ A     R    ++ ++      
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 113 --PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK-------- 162
             P+V++YN +IN  F+ G   +A+ L  E+   G  PN VT+N +I   CK        
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 163 --------EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
                   +G++++A ++++ M   G  PD VTY+ LID  CK G   EA  + D M R+
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G   +  T  T+LH    +  L + + LL    + G  L++  +  LI  Y ++E  ++A
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKA 314

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           +  + EM+++   P+  TY  +I  L ++G+ E A+   ++++  G+ PD  TF ++IHG
Sbjct: 315 MTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHG 374

Query: 335 FCS-----------------------------------EGQVEKALQFHNKMVEKSFKPD 359
            C+                                   EG+V +A  F ++++    KPD
Sbjct: 375 LCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPD 434

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +V+  IL+ G C +G +++++K     +  G   D+VTY+ L++  CK  R++DA  L  
Sbjct: 435 VVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYR 494

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  K + P+  TY  I   L  +GR+  A++F   +V++G                 I 
Sbjct: 495 EMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSG-----------------IQ 537

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               +Y+  +   C      +AL++F+  R K   +   T+  ++ GL+K
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 216/445 (48%), Gaps = 1/445 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY T+L     KG L ++ DLL+ M + G+      +NIL+  Y K   L +AM  
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M Q    P+V TY  +I+  C AG +E+A     +M S  L PD++T+ +LI+    
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +  KL  E+   GI PNA+  N ++   CKEG++ +A      +   G  PD V+
Sbjct: 378 IGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVS 437

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  C  G M+E+ +++  M   GL+ + +T + +L+  C   ++D+A  L     
Sbjct: 438 YTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF 497

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +    + ++Y  ++ G F   +   A + + ++ +  I     TYN ++ GL ++   +
Sbjct: 498 SKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVD 557

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ M   L       +  TFN +I G    G++  A    + ++     PD +   +++
Sbjct: 558 EALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMI 617

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                EG+LE++ + F S    G   +S T N ++  L ++  +  A   L++++EK+  
Sbjct: 618 QSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYS 677

Query: 428 PDRYTYAAIHTALVESGRLEEAQKF 452
            +  T A +  ++V   + ++  KF
Sbjct: 678 VEAST-AVLLISIVSERKYQKEVKF 701



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 180/379 (47%), Gaps = 1/379 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY T++D L K G++ +     S M  +GL P+  T+  L+ G C +G  K+ 
Sbjct: 325 GFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKV 384

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   M      P+    N +++  C  G + EA     ++  + + PDVV+Y  LI+ 
Sbjct: 385 EKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDG 444

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G+  E+ KL+  +   G++P+ VT++ ++  YCK G++D A  + R M      P+
Sbjct: 445 YCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPN 504

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN ++     AG +  A      +   G+++   T N +L  LC    +DEA  +  
Sbjct: 505 AITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQ 564

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               + + L+  ++  +I G  +  +   A  L+  +    ++P    Y  MI    + G
Sbjct: 565 GLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEG 624

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E++ ++   + ++G   +  T N I+     +G V +A  +  K+ EK +  +  T  
Sbjct: 625 LLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAV 684

Query: 365 ILLSGLCREGILEKALKFF 383
           +L+S +  E   +K +KF 
Sbjct: 685 LLIS-IVSERKYQKEVKFL 702


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 167/567 (29%), Positives = 270/567 (47%), Gaps = 45/567 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +L +  ++ ++  V  L  DM    + P   T+N+L+   C  G L++A  +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M      P+ +T+ +L+ G+C AG+  +   L  +M ++ +LP+ V YNTLI+ F +
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---EENGFS-P 183
            G++ +A KL+D++ E G+ P+  T N  I   C  GKI +A +I R+M   EE G   P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TY  ++   CK G +EEA  ++D M R    +N  + N  L  L    KL EA+++L
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   D  SY  ++ G  ++   + A  L   M    I+P T TY+ ++ G    
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A ++L+E++ +   P+  T N ++H    EG++ +A     KM EK +  D VTC
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
           NI+++ LC  G L+KA++        G A                        D VTY+T
Sbjct: 470 NIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYST 529

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----------- 449
           +IS LCK  RL+DA     EM  K L PD   Y     +    G++  A           
Sbjct: 530 IISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRG 589

Query: 450 -----QKFTSIMVETGKINH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
                Q + S+++  G  N   ++         + + P   +Y+  +N  C  GR  DA 
Sbjct: 590 CNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAP 649

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
            + +E  QKGI+ N S++  L+    K
Sbjct: 650 SVLDEMLQKGISPNISSFRILIKAFCK 676



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 274/582 (47%), Gaps = 56/582 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+  T+  ++    + G  ++  +LL  M+  G++PN   YN L+S +CK G 
Sbjct: 173 MPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGK 232

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLL-PDVV 116
             +A ++VD M ++  +P V T+N  I+  C +G + EA R+ ++M   E L L  P+V+
Sbjct: 233 THDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVI 292

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY  ++  F + G   EA  L+D +  +    N  ++NI +    + GK+ +A  +++ M
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEM 352

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G  PD  +YN ++D  CK G + +A  +M +M R G+  +T+T +T+LH  C + K+
Sbjct: 353 LGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKV 412

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
            EA  LL+         +  +   L+   +++ + + A  L  +M E+     T T N +
Sbjct: 413 FEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNII 472

Query: 297 IWGLSQSGKTEQAIDMLNELLQSG-----------------------MIPDETTFNTIIH 333
           I  L  +G+ ++AI+++N +   G                         PD  T++TII 
Sbjct: 473 INALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIIS 532

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C  G+++ A +   +M+ K  +PD    +  +   CREG +  A +  +    +G   
Sbjct: 533 GLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNK 592

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
              TYN+LI  L  + ++ + +GL+ EM EK + PD  TY  +   L E GR+ +A    
Sbjct: 593 TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVL 652

Query: 454 SIMVETGKINHQVVQPNTS---------------KTPEEIDPSSIS--------YSEKIN 490
             M++ G      + PN S               K   E+   +++        Y+   N
Sbjct: 653 DEMLQKG------ISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFN 706

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           E    G+  +A ++FE    +   I    Y +L++ L K  K
Sbjct: 707 ELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEK 748



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 148/586 (25%), Positives = 272/586 (46%), Gaps = 70/586 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP----------------- 43
           M   G LP+NV YNT++ +  K+GK ++   L+  M++ GLVP                 
Sbjct: 208 MRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGK 267

Query: 44  ----------------------NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
                                 N  TY +++ G+CK G L+EA  +VD M +N +  ++ 
Sbjct: 268 ILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLE 327

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           +YN+ + G    G L EA+ + KEM  + + PD+ +YN +++   ++G   +A  L+  +
Sbjct: 328 SYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLM 387

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
             +GI P+ VT++ ++  YC +GK+ +A  ++  M  N  SP+  T N L+ +  K G +
Sbjct: 388 IRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRI 447

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            EA  ++  M  KG  ++T+T N I++ LC   +LD+A  ++N     G      + G L
Sbjct: 448 SEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG----SAALGNL 503

Query: 262 ITGYFRDEKANRALKLWDE-MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
                     N  + L D+ +  ++  P   TY+ +I GL ++G+ + A     E++  G
Sbjct: 504 ---------GNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKG 554

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + PD   ++T IH FC EG++  A Q    M ++     + T N L+ GL  +  + +  
Sbjct: 555 LQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELY 614

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
                   KG + D  TYN +++ LC+  R+ DA  +L EM +K + P+  ++  +  A 
Sbjct: 615 GLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674

Query: 441 VESGRLEEAQKFTSIMVE---------TGKINHQVVQPNTSKTPE--------EIDPSSI 483
            ++   + + +   I +          T   N  +V    ++  E          D  + 
Sbjct: 675 CKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNF 734

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            Y + I+  C   + + A  +      KG   + +++M +++G  K
Sbjct: 735 LYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGK 780



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 235/477 (49%), Gaps = 38/477 (7%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  L  L + GKL E   +L +M   G+ P+  +YNI++ G CK G L +A  ++ LM
Sbjct: 328 SYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLM 387

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N  LPD  TY+ L++G+C+ G + EA  L  EM S    P+  T N L++  ++ GR 
Sbjct: 388 IRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRI 447

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG----------- 180
            EA  L+ +++E G   + VT NI+I   C  G++DKA +IV  M  +G           
Sbjct: 448 SEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSF 507

Query: 181 ------------FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
                        +PD VTY+T+I   CKAG +++A +    M  KGL+ ++   +T +H
Sbjct: 508 IGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIH 567

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           + C E K+  A+ +L    KRG      +Y +LI G     +      L DEM+E+ + P
Sbjct: 568 SFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSP 627

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
              TYN M+  L + G+   A  +L+E+LQ G+ P+ ++F  +I  FC      KA  F 
Sbjct: 628 DVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFC------KACDF- 680

Query: 349 NKMVEKSFKPDIVTCN-------ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
            K   + F+  +  C        ++ + L   G + +A + F + + +   + +  Y  L
Sbjct: 681 -KASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDL 739

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           I  LCK+ +LE A  +L  + +K    D  ++  +     + G    A +    M+E
Sbjct: 740 IDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMME 796



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 186/395 (47%), Gaps = 57/395 (14%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           +P+   +N+++K   +E +++    + ++M     SP+  T+N LI   C +G++E+A  
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           + D M  +G                CE                    +E ++G L+ GY 
Sbjct: 169 LFDKMPARG----------------CEP-------------------NEFTFGILVRGYC 193

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R   A++ L+L  +M+   I+P+   YN +I    + GKT  A  +++++ + G++P   
Sbjct: 194 RAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVE 253

Query: 327 TFNTIIHGFCSEGQV-EKALQFHNKMVEKSF---KPDIVTCNILLSGLCREGILEKALKF 382
           TFN+ I   C  G++ E +  F +  +++      P+++T  ++L G C+EG+LE+A   
Sbjct: 254 TFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTL 313

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
             +       ++  +YN  +  L +  +L +A+ +L EM    + PD Y+Y  +   L +
Sbjct: 314 VDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCK 373

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
           +G L +A+    +M+  G                 I P +++YS  ++ +CS+G+  +A 
Sbjct: 374 NGMLSDARMLMGLMIRNG-----------------ILPDTVTYSTLLHGYCSKGKVFEAN 416

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            +  E      + N  T   L++ L K  + IS+A
Sbjct: 417 NLLHEMISNNCSPNTYTCNVLLHSLWKEGR-ISEA 450



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 9/298 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           + G  C PD VTY+TI+  L K G+L++ +    +M  +GL P+   Y+  +  +C+ G 
Sbjct: 515 ISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGK 574

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A +V+  M +      + TYN LI G  +   + E + L  EM    + PDV TYN 
Sbjct: 575 ISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNH 634

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   E GR  +A  ++DE+ + GI PN  +  I+IK +CK     KA   V  +  N 
Sbjct: 635 MLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDF-KASHEVFEIALNV 693

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                  Y  + +     G + EA  + +    +   +       ++  LC ++KL+ A 
Sbjct: 694 CGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAAS 753

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFR-------DEKANRALKLWDEM-KERQIMPST 290
            +L+    +GY  D  S+  +I G+ +       DE A R +++  E  KE +  P+ 
Sbjct: 754 DVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAYPNV 811


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 158/593 (26%), Positives = 283/593 (47%), Gaps = 55/593 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C P  ++YN I++ L + G   +   +   MK  G+VP+  T+ I +  +C+   
Sbjct: 102 MDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R+++ M       +   Y  ++ G+       EA+ L  +M  + + PDV T+N 
Sbjct: 162 PHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNK 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + G   E+ +L++++ + G+  N  T NI I+  C++G +  A  ++ ++   G
Sbjct: 222 LLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREG 281

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTYNTLI   CK  N+ EA + +  +   GL+ +  T NT++   C    L  A 
Sbjct: 282 LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAE 341

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L  A  +G+  DE +Y +LI G  ++++ +RAL L++    + + P+   YN +I GL
Sbjct: 342 KILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGL 401

Query: 301 SQSGKTEQAIDMLNEL-----------------------------------LQSGMIPDE 325
            Q G   QA+ M+NE+                                   +  G +PD 
Sbjct: 402 CQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDV 461

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            TFNT+I G+C + ++E  +Q  NKM      PD++T N +L+GL +    E  ++ F +
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + KG   + +TYN L  SLCK  ++ +A  L+ E+  K + PD  ++A I +    +G 
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581

Query: 446 LEEAQKFTSIMVETGKINHQVVQPN--TSKTPEEID-----------------PSSISYS 486
           L+ A +    M E  K++H     N   +   E++D                 P + +Y 
Sbjct: 582 LKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
             I+  C  G      +   E  +KG   + +T+  ++N L  + + + +AVD
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHR-VHEAVD 693



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 246/511 (48%), Gaps = 18/511 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+N +L  L KKG++ E   LL+ + K+G+  N  T+NI + G C+ G L  A
Sbjct: 211 GIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGA 270

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++D + +    PDV TYN LI G C    + EA +   ++ +  L PD  TYNTLI+ 
Sbjct: 271 MSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDG 330

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G    A K++      G  P+  T+  +I   C+  +ID+A  +       G  P 
Sbjct: 331 YCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPT 390

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YN LI   C+ G + +A +MM+ M   G   +  T N +++ LC    + +A  L+N
Sbjct: 391 VILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMN 450

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A  +GY  D  ++ TLI GY +  K    +++ ++M    + P   TYN+++ GLS++ 
Sbjct: 451 DAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAV 510

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E  ++    +++ G +P++ T+N +    C  G+V +AL   ++++ K   PD V+  
Sbjct: 511 KNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFA 570

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDS-VTYNTLISSLCKERRLEDAFGLLSEMEE 423
            ++SG    G L+ A + FR    + K   +  TYN +I++  ++  L     L  EM  
Sbjct: 571 TIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGA 630

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               PD YTY  +      +G  +   KF   M+E G I                 PS  
Sbjct: 631 GGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFI-----------------PSLT 673

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           ++   IN  C Q R  +A+ I       GI 
Sbjct: 674 TFGRVINCLCVQHRVHEAVDIIHFMVHNGIV 704



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 248/506 (49%), Gaps = 17/506 (3%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           +KGK+ E  D+   M      P+  +YN +++   + G+ K+A +V   M     +PDV+
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+ + I  +C       A RL   M S     + V Y T++  F+E    +EA++L +++
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
              GI P+  T N ++   CK+G++ ++ +++  + + G   +  T+N  I   C+ G +
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
             A  M+D + R+GL  + +T NT++  LC    + EA   L+     G   D  +Y TL
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY +      A K+      +  +P  FTY ++I GL Q+ + ++A+ + N  L  G+
Sbjct: 328 IDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGL 387

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P    +N +I G C EG + +ALQ  N+M E     DI T N++++GLC+ G +  A  
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                I KG   D  T+NTLI   CK+ ++E    +L++M    + PD  TY ++   L 
Sbjct: 448 LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLS 507

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           ++ + E+  +    MVE G +                 P+ I+Y+      C  G+  +A
Sbjct: 508 KAVKNEDLMETFETMVEKGCV-----------------PNKITYNILTESLCKAGKVNEA 550

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGL 527
           L + +E   KGI  +  ++  +++G 
Sbjct: 551 LDLVDEILNKGITPDTVSFATIISGF 576



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 261/532 (49%), Gaps = 23/532 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG---YCKLGWLKEAMRV 67
           +TY  I+  L   G    + ++L++ +    + N     + +     Y + G ++EA+ V
Sbjct: 41  LTYKCIIQKLGFHGNFVAMENVLAETRMD--IDNSLLEGVYIGAMKSYGRKGKVQEAVDV 98

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      P V +YN ++N    +G  ++A ++   M+++ ++PDV T+   I  F  
Sbjct: 99  FERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCR 158

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R   A +L++ +   G + NAV +  ++  + +E    +A ++  +M   G  PD  T
Sbjct: 159 TKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVST 218

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N L+   CK G ++E+ R+++ + +KG+  N  T N  +  LC +  L  A  +L+S  
Sbjct: 219 FNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVI 278

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D V+Y TLI G  ++     A K   ++    + P  FTYN +I G  + G  +
Sbjct: 279 REGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQ 338

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L   +  G +PDE T+ ++I+G C   ++++AL   N  + K  KP ++  N+L+
Sbjct: 339 NAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLI 398

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+EG++ +AL+        G + D  TYN +I+ LCK   + DA  L+++   K   
Sbjct: 399 KGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYV 458

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD +T+  +     +  ++E     T+I +     +H V             P  I+Y+ 
Sbjct: 459 PDVFTFNTLIDGYCKQLKME-----TTIQILNKMWSHGVT------------PDVITYNS 501

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            +N      + +D ++ FE   +KG   NK TY  L   L K  K +++A+D
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGK-VNEALD 552



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 214/454 (47%), Gaps = 36/454 (7%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N  +  L +KG L+    +L  + ++GL P+  TYN L+ G CK   + EA + +  +
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PD +TYN LI+G+C  GML+ A ++ +       +PD  TY +LIN   ++   
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L +     G+KP  + +N++IK  C+EG I +A +++  M ENG S D  TYN +
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  CK G + +A  +M+    KG   +  T NT++   C + K++    +LN     G 
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y +++ G  +  K    ++ ++ M E+  +P+  TYN +   L ++GK  +A+D
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552

Query: 312 MLNELLQSGMIPDETTFNTII------------------------------------HGF 335
           +++E+L  G+ PD  +F TII                                    + F
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
             +  +    +   +M      PD  T  +++ G C  G  +   KF    I KG     
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSL 672

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            T+  +I+ LC + R+ +A  ++  M    + P+
Sbjct: 673 TTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE 706



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 188/359 (52%), Gaps = 3/359 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  TY ++++ L +  +++    L +    +GL P    YN+L+ G C+ G + +A
Sbjct: 351 GFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M++N    D+WTYN++ING C  G + +A  L  +  +   +PDV T+NTLI+ 
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDG 470

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  +     ++++++  HG+ P+ +T+N ++    K  K +   +    M E G  P+
Sbjct: 471 YCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPN 530

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN L ++ CKAG + EA  ++D +  KG+  +T++  TI+        L  AY L  
Sbjct: 531 KITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFR 590

Query: 245 SASKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              ++ Y +     +Y  +I  +      +   KL+ EM      P T+TY  MI G   
Sbjct: 591 RMGEQ-YKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCI 649

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +G T+     L E+++ G IP  TTF  +I+  C + +V +A+   + MV     P++V
Sbjct: 650 TGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 265/533 (49%), Gaps = 7/533 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+P+ + YNT++D   KKG +     L  ++K +G +P   TY  +++G+CK G  K
Sbjct: 232 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 291

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
              R++  M       +V  YN +I+     G + +A    + M      PD+VTYNTLI
Sbjct: 292 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 351

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +     G+  EA +L+++    G+ PN  ++  +I  YCK+G  D+A   +  M E G  
Sbjct: 352 SGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK 411

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTY  L+     AG ++ A  + + M  +G+  +    N ++  LC + KL  A +L
Sbjct: 412 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L     +    D   Y TL+ G+ R+   + A KL++   E+ + P    YNAMI G  +
Sbjct: 472 LAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 531

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G  + A+  +N + +  + PDE T++T+I G+  +  ++ A +   +MV+   KP++VT
Sbjct: 532 FGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVT 591

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L++G CR+G L ++LK FR     G   + VTY+ LI S CKE +L DA     EM 
Sbjct: 592 YTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEML 651

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN--TSKTPEEIDP 480
             K  P+  T+  +     ++G    ++K         + N Q +  N       +   P
Sbjct: 652 MNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEF-----QENKQSMFLNFFGRMISDGWAP 706

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            S +Y+  +   C  G ++ ALQ+  +   KG   +  +++ L++G+    +S
Sbjct: 707 RSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRS 759



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 250/527 (47%), Gaps = 21/527 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYN----ILVSGYCKLGWLK 62
            PD +  N++L+ L K G++   R L  +M +     +R   N    I+V G CK G L+
Sbjct: 162 FPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLE 221

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           E  ++++       +P++  YN LI+G+C  G +E A  L  E++    LP V TY  +I
Sbjct: 222 EGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAII 281

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F + G      +L+ E++  G+  N   +N +I    K G I KA + +  M E G  
Sbjct: 282 NGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCK 341

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYNTLI  +C+ G + EA ++++    KGL  N  +   ++H  C +   D A   
Sbjct: 342 PDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNW 401

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L   ++RG+  D V+YG L+ G     + + AL + ++M ER + P    YN ++ GL +
Sbjct: 402 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 461

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             K   A  +L E+L   ++PD   + T++ GF   G +++A +     +EK   P IV 
Sbjct: 462 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVG 521

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N ++ G C+ G+++ A+        +  A D  TY+T+I    K+  L+ A  +  EM 
Sbjct: 522 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 581

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           + K  P+  TY ++       G L  + K    M   G +                 P+ 
Sbjct: 582 KMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLV-----------------PNV 624

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++YS  I   C + +  DA   FEE        N  T+  L+NG  K
Sbjct: 625 VTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSK 671



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 259/569 (45%), Gaps = 57/569 (10%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           +   Y+++L  L +    +E+  +L +M+ + + P R   +I++  Y   G +++A+ + 
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 69  DLMTQNKS-LPDVWTYNMLIN--------------------------------------- 88
             + +  +  PDV   N L+N                                       
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G C  G LEE  +L ++      +P+++ YNTLI+ + + G    A  L  EL   G  P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
              T+  +I  +CK+G      +++  M   G + +   YNT+IDA  K G++ +A   +
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M   G K + +T NT++   C + K+ EA  LL  A  +G   ++ SY  LI  Y + 
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQ 392

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              +RA     EM ER   P   TY A++ GL  +G+ + A+ +  ++L+ G+ PD   +
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N ++ G C + ++  A     +M+++S  PD      L+ G  R G L++A K F   I 
Sbjct: 453 NILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 512

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG     V YN +I   CK   ++DA   ++ M+++ L PD +TY+ +    V+   L+ 
Sbjct: 513 KGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDG 572

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           AQK    MV+                  +  P+ ++Y+  IN  C +G    +L+IF E 
Sbjct: 573 AQKMFREMVKM-----------------KCKPNVVTYTSLINGFCRKGDLHRSLKIFREM 615

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +  G+  N  TY  L+    K  K I  A
Sbjct: 616 QACGLVPNVVTYSILIGSFCKEAKLIDAA 644



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 225/457 (49%), Gaps = 14/457 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YNTI+DA +K G + +  + +  M + G  P+  TYN L+SG C+ G + EA ++++  
Sbjct: 311 VYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQA 370

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                +P+ ++Y  LI+ +C  G  + A     EM      PD+VTY  L++    +G  
Sbjct: 371 LGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEV 430

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  + +++ E G+ P+A  +NI++   CK+ K+  A  ++  M +    PD   Y TL
Sbjct: 431 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D   + GN++EA ++ ++   KG+    +  N ++   C    + +A   +N   KR  
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             DE +Y T+I GY +    + A K++ EM + +  P+  TY ++I G  + G   +++ 
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E+   G++P+  T++ +I  FC E ++  A  F  +M+     P+ VT N L++G  
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670

Query: 372 REG---ILEKA-----------LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           + G   I EK            L FF   I  G A  S  YN+++  LC+      A  L
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            ++M  K   PD  ++ A+   +   GR +E +   S
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVS 767



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 17/193 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P+ VTY+ ++ +  K+ KL +      +M     VPN  T+N LV+G+ K G 
Sbjct: 615 MQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGT 674

Query: 61  ---------LKEAMRVVDLMTQNKSLPDVW-----TYNMLINGWCNAGMLEEAFRLRKEM 106
                     +E  + + L    + + D W      YN ++   C  GM   A +L  +M
Sbjct: 675 RAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKM 734

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLID-ELDEHGIKPNAVTHNIMIKWYCKEGK 165
            S   +PD V++  L++     GRS E   ++   L+E  ++  AV ++ ++  Y  +G 
Sbjct: 735 TSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQI-AVNYSSILDQYLPQGT 793

Query: 166 IDKACKIVRNMEE 178
             +A  I++ M E
Sbjct: 794 -SEASVILQTMFE 805


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 233/461 (50%), Gaps = 2/461 (0%)

Query: 1   MEGFGCLPDNV-TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           M+ FG +P NV T N ++++     ++N    +L+ + K G  P+  ++  L+ G C  G
Sbjct: 100 MDSFG-IPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            + EA+ + D M      PDV  Y  LING C  G    A RL + ME     PDVV Y 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   +  +  +AF L  E+   GI PN VT N ++   C  G+      ++  M ++
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+ ++  T++DA CK G + +A  ++D+M + G++ + +T   ++   C   ++DEA
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +    +G   +  SY TLI GY + E+ ++A+ L++EM  ++++P+T TYN +I G
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L   G+ + AI +  E++  G IPD  T+  ++   C    ++KA+     +   +  PD
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I    I++ G+CR G LE A   F +   KG   +  TYN +   LCK   L++A  L  
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFM 518

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           EM+E     D  TY  I    + +     A +    M+  G
Sbjct: 519 EMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 215/441 (48%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            GC PD  ++ T++  L  +G++ E   L   M  +G  P+   Y  L++G CK G    
Sbjct: 138 LGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSA 197

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M +    PDV  Y  LI+  C      +AF L  EM +  + P++VT N+L+ 
Sbjct: 198 AIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVY 257

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G       L++E+ +  I PNA++   ++   CKEG + +A  +V  M ++G  P
Sbjct: 258 ALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEP 317

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY  LID +C    M+EA ++ D+M  KG   N  + NT+++  C  +++D+A  L 
Sbjct: 318 DVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLF 377

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++    + V+Y TLI G     +   A+ L+ EM     +P   TY  ++  L ++
Sbjct: 378 EEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKN 437

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A+ +L  +  S + PD   +  +I G C  G++E A    + +  K  KP++ T 
Sbjct: 438 CHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTY 497

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI+  GLC+ G+L++A K F        + D  TYNT+     +      A  LL EM  
Sbjct: 498 NIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLA 557

Query: 424 KKLGPDRYTYAAIHTALVESG 444
           +    D  T   +   L + G
Sbjct: 558 RGFSCDVSTTTLLVGMLSDDG 578



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 226/445 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +  IL ++ K  + + V  L   M   G+  N  T N+L++ +C L  +  A  V
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  ++  LI G C  G + EA  L  +M      PDVV Y TLIN   +
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G +  A +L+  +++   +P+ V +  +I   CK+ +  +A  +   M   G SP+ VT
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            N+L+ A C  G  +    +++ M    +  N I+L T++  LC E  + +A+ +++   
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D V+Y  LI G+    + + A+K++D M  +   P+ F+YN +I G  +  + +
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+ +  +IP+  T+NT+IHG C  G+++ A+    +MV     PD+VT  ILL
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L+KA+   ++        D   Y  +I  +C+   LEDA  L S +  K L 
Sbjct: 432 DYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK 491

Query: 428 PDRYTYAAIHTALVESGRLEEAQKF 452
           P+ +TY  +   L + G L+EA K 
Sbjct: 492 PNVWTYNIMTHGLCKRGLLDEATKL 516



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 224/483 (46%), Gaps = 17/483 (3%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           +N   S Y     L +A+   + M      P +  +  ++              L ++M+
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           S  +  +V T N LIN F    R   AF ++ ++ + G +P+  +   +IK  C EG+I 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A  +   M   GF PD V Y TLI+  CK G+   A R++  M +   + + +   T++
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           H+LC +++  +A+ L +    +G   + V+  +L+       +      L +EM + +IM
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+  +   ++  L + G   QA D+++ + QSG+ PD  T+  +I G C   ++++A++ 
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            + MV K   P++ + N L++G C+   ++KA+  F     +    ++VTYNTLI  LC 
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCH 401

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             RL+DA  L  EM      PD  TY  +   L ++  L++A      +           
Sbjct: 402 VGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI----------- 450

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     +DP    Y+  I+  C  G  +DA  +F     KG+  N  TY  + +GL
Sbjct: 451 ------EGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGL 504

Query: 528 IKR 530
            KR
Sbjct: 505 CKR 507



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 180/375 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C PD V Y T++ +L K  +  +  +L S+M  +G+ PN  T N LV   C LG 
Sbjct: 205 MEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGE 264

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K    +++ M  +K +P+  +   +++  C  GM+ +A  +   M    + PDVVTY  
Sbjct: 265 WKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTA 324

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+         EA K+ D +   G  PN  ++N +I  YCK  ++DKA  +   M    
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYNTLI   C  G +++A  +   M   G   + +T   +L  LC    LD+A 
Sbjct: 385 LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAM 444

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +        D   Y  +I G  R  +   A  L+  +  + + P+ +TYN M  GL
Sbjct: 445 ALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGL 504

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A  +  E+ ++    D  T+NTI  GF    +  +A+Q   +M+ + F  D+
Sbjct: 505 CKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDV 564

Query: 361 VTCNILLSGLCREGI 375
            T  +L+  L  +G+
Sbjct: 565 STTTLLVGMLSDDGL 579



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 162/378 (42%), Gaps = 17/378 (4%)

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           ++ HN     Y     +D A      M      P  V +  ++ +  K         +  
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G+  N  TLN ++++ C   +++ A+ +L    K G   D  S+ TLI G   + 
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   AL L+D+M      P    Y  +I GL ++G T  AI +L  + +    PD   + 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+IH  C + Q  +A    ++M+ K   P+IVTCN L+  LC  G  +         +  
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
               ++++  T++ +LCKE  +  A  ++  M +  + PD  TY A+         ++EA
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            K   +MV  G                   P+  SY+  IN +C   R   A+ +FEE  
Sbjct: 339 VKVFDMMVHKG-----------------CAPNVFSYNTLINGYCKIERMDKAMYLFEEMC 381

Query: 510 QKGIAINKSTYMNLMNGL 527
           ++ +  N  TY  L++GL
Sbjct: 382 RQKLIPNTVTYNTLIHGL 399



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG    PD   Y  ++D + + G+L + RDL S++  +GL PN  TYNI+  G CK G 
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++   M +N    D  TYN +  G+        A +L +EM +     DV T   
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTL 569

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK--WYCKEGKIDKACKIVRNMEE 178
           L+    + G        +D+ + H ++       I +K   +CKE  I+   K++ ++ +
Sbjct: 570 LVGMLSDDG--------LDQSEAHKLEDMFPHLRIQVKDTVFCKEDDINALGKVISDLND 621


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 235/463 (50%), Gaps = 1/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T+ T++    ++G +     + + M + G    + T N+L++GYCKLG 
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+  +     +   PD  TYN  +NG C    +  A ++   M      PDV TYN 
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++G+  EA  +++++ + G  P+  T N +I   C   ++++A  + R +   G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  T+N LI+A CK G+   A R+ + M   G   + +T NT++  LC   KL +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G     ++Y T+I G  +  +   A +++D+M  + I  +  T+N +I GL
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K + A +++N+++  G+ P+  T+N+I+  +C +G ++KA      M    F+ D+
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++GLC+ G  + ALK  R   +KG       YN ++ SL +   + DA  L  E
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           M E    PD  TY  +   L    G ++EA  F   MV+ G I
Sbjct: 627 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 260/536 (48%), Gaps = 17/536 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D V YN +L+ L +  K+  +  + S+M  +G+ P+  T+N L+   C+   ++ 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +++ M+     PD  T+  L+ G+   G +E A R++  M  +      VT N LIN
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + GR  +A   I +    G +P+ +T+N  +   C+   +  A K++  M + G  P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN +++  CK G +EEA  +++ M  +G   +  T NT++  LC   +L+EA  L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +G   D  ++  LI    +    + AL+L++EMK     P   TYN +I  L   
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A+D+L ++  +G      T+NTII G C + ++E+A +  ++M  +    + +T 
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC++  ++ A +     I +G   +++TYN++++  CK+  ++ A  +L  M  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
                D  TY  +   L ++GR + A K    M   G                 + P+  
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG-----------------MRPTPK 602

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +Y+  +     +   +DAL +F E  + G   +  TY  +  GL +    I +A D
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 207/369 (56%), Gaps = 1/369 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN +++ L K G+L E + +L+ M  +G +P+ TT+N L++  C    L+EA+ +
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +T     PDV+T+N+LIN  C  G    A RL +EM++    PD VTYNTLI+    
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L+ +++  G   + +T+N +I   CK+ +I++A ++   M+  G S + +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NTLID  CK   +++AF +++ M  +GL+ N IT N+IL   C +  + +A  +L + +
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+ +D V+YGTLI G  +  +   ALK+   M+ + + P+   YN ++  L +     
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            A+ +  E+ + G  PD  T+  +  G C   G +++A  F  +MV+K F P+  +  +L
Sbjct: 619 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678

Query: 367 LSGLCREGI 375
             GL   G+
Sbjct: 679 AEGLLNLGM 687



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 180/336 (53%), Gaps = 1/336 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD  T+NT++ AL    +L E  DL   +  +G+ P+  T+NIL++  CK+G    A
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ + M  +   PD  TYN LI+  C+ G L +A  L K+MES       +TYNT+I+ 
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++ D++D  GI  NA+T N +I   CK+ KID A +++  M   G  P+
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+++   CK G++++A  +++ M   G +++ +T  T+++ LC   +   A  +L 
Sbjct: 531 NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 590

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G      +Y  ++   FR      AL L+ EM E    P   TY  +  GL + G
Sbjct: 591 GMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650

Query: 305 -KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
              ++A D + E++  G IP+ ++F  +  G  + G
Sbjct: 651 GPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 55/270 (20%)

Query: 296 MIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           ++  L +    + A+ MLN  L +    P    +  II    + G ++       +M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWI--LKGKAVDSVTY-------------- 398
             +  +   +  L     + + + A+    + +  L G   D+V Y              
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 399 ---------------------NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
                                NTL+ +LC+  ++  A  +L EM  + + PD  T+  + 
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
              VE G +E A +  + M+E G                    + ++ +  IN +C  GR
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMG-----------------CSATKVTVNVLINGYCKLGR 266

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +DAL   ++    G   ++ TY   +NGL
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGL 296


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 250/525 (47%), Gaps = 70/525 (13%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ V+YNT+++  F +G++++  +L  DM  QG+ PN  TY I++ G CK   +  A 
Sbjct: 200 CPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAE 259

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M      P++ TY  LI+G+ + G  +E  R+ KEM +  L PD  TY  L++  
Sbjct: 260 GVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYL 319

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-------------------- 165
            + G+  EA KL D +   GIKP+   + I++  Y  +G                     
Sbjct: 320 CKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNH 379

Query: 166 ---------------IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
                          I +A  I   M + G SP+ V Y TLIDA CK G +++A    + 
Sbjct: 380 YIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQ 439

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M  +G+  N +   ++++ LC   K ++A  L      +G + + V + T++     + +
Sbjct: 440 MINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGR 499

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
             +A +L D M+     P   +YNA+I G    GKT++A  +L+ +L  G+ P+E T+NT
Sbjct: 500 VMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNT 559

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIV----------------------------- 361
           ++HG+C +G+++ A     +M+     P +V                             
Sbjct: 560 LLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619

Query: 362 ------TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
                 T NI+L+GL +   +++ALK F+S   K   VD +T+N +I +L K+ R EDA 
Sbjct: 620 KQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAM 679

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L + +    L PD  TY  I   L+E G LEE     S M ++G
Sbjct: 680 NLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 268/550 (48%), Gaps = 21/550 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC P+ V+YNT+L     + +  E  +LL   +D + +   PN  +YN +++G+  
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFT 216

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G + +A  +   MT     P+V TY ++I+G C A +++ A  + ++M    + P++VT
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT 276

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  LI+ +   G+  E  +++ E+  HG++P+  T+ +++ + CK+GK  +A K+  +M 
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMI 336

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  PD   Y  ++      G + E    +D+M   G+  N    N +      +  + 
Sbjct: 337 RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIG 396

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  + N   ++G   + V+Y TLI    +  + + A   +++M    + P+   + +++
Sbjct: 397 EAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLV 456

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           +GL    K E+A ++  E++  G+ P+   FNTI+   C+EG+V KA +  + M     +
Sbjct: 457 YGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTR 516

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PDI++ N L+ G C  G  ++A K     +  G   +  TYNTL+   C++ R++DA+ +
Sbjct: 517 PDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSV 576

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSK 473
             EM    + P   TY  I   L ++ R  EA++    M+ +GK      + ++    SK
Sbjct: 577 FQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSK 636

Query: 474 T--------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                           +++    I+++  I      GR +DA+ +F      G+  + +T
Sbjct: 637 NNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTT 696

Query: 520 YMNLMNGLIK 529
           Y  +   LI+
Sbjct: 697 YRLIAENLIE 706



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 225/454 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY  +LD L KKGK  E R L   M ++G+ P+ + Y I++ GY   G 
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGA 359

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E    +DLM  N   P+ + +N++   +    M+ EA  +  +M    L P+VV Y T
Sbjct: 360 LSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYAT 419

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ PN V    ++   C   K +KA ++   M   G
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V +NT++   C  G + +A R++D+M R G + + I+ N ++   C   K DEA 
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEAS 539

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   +E +Y TL+ GY RD + + A  ++ EM    I P   TYN ++ GL
Sbjct: 540 KLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL 599

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ +  +A ++   ++ SG      T+N I++G      V++AL+    +  K  + DI
Sbjct: 600 FKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDI 659

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T NI++  L ++G  E A+  F +    G   D  TY  +  +L +E  LE+  G+ SE
Sbjct: 660 ITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSE 719

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           ME+    P+      +   L+  G +  A  + S
Sbjct: 720 MEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLS 753



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 240/532 (45%), Gaps = 57/532 (10%)

Query: 41  LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK-SLPDVWTYNMLINGWCNAGMLEEA 99
           + P+  TY+ILV  +C++G L+       L+ +    + DV   N L+ G C+A  + EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 100 FR-LRKEMESLKLLPDVVTYNTL------------------------------------- 121
              L + M  L   P+VV+YNTL                                     
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 122 -INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            IN FF  G+  +A+ L  ++ + GI PN VT+ I+I   CK   +D+A  + + M + G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  LI      G  +E  RM+  M   GL+ +  T   +L  LC + K  EA 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +S  ++G   D   YG ++ GY      +      D M    I P+ + +N +    
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++     +A+D+ N++ Q G+ P+   + T+I   C  G+V+ A    N+M+ +   P+I
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+ GLC     EKA + F   + +G   + V +NT++ +LC E R+  A  L+  
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           ME     PD  +Y A+       G+ +EA K   IM+  G                 + P
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG-----------------LKP 552

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  +Y+  ++ +C  GR  DA  +F+E    GI     TY  +++GL K R+
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 212/424 (50%), Gaps = 4/424 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P++  +N +  A  KK  + E  D+ + M++QGL PN   Y  L+   CKLG 
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A    + M      P++  +  L+ G C     E+A  L  EM +  + P+VV +NT
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++      GR M+A +LID ++  G +P+ +++N +I+ +C  GK D+A K++  M   G
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYNTL+   C+ G +++A+ +   M   G+    +T NTILH L   ++  EA 
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +    G      +Y  ++ G  ++   + ALK++  +  + +     T+N MI  L
Sbjct: 610 ELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGAL 669

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E A+++   +  +G++PD TT+  I      EG +E+     ++M +    P+ 
Sbjct: 670 LKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNS 729

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE----RRLEDAFG 416
           +  N L+  L   G + +A  +      K  ++++ T + LIS   +E    + L + + 
Sbjct: 730 LMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYH 789

Query: 417 LLSE 420
            L+E
Sbjct: 790 FLNE 793



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 216/477 (45%), Gaps = 62/477 (12%)

Query: 110 KLLPDVVTYNTLINRFFESGR---SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
           K+ PDV TY+ L+  F   GR      AF LI  L       + V  N ++K  C   ++
Sbjct: 89  KVAPDVFTYSILVGCFCRMGRLEHGFAAFGLI--LKTGWRVNDVVVVNRLLKGLCDAKRV 146

Query: 167 DKACKIV-RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM---NTIT 222
            +A  ++ R M E G +P+ V+YNTL+   C     EEA  ++ +M    ++    N ++
Sbjct: 147 GEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVS 206

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            NT+++    E ++D+AY L    + +G   + V+Y  +I G  + +  +RA  ++ +M 
Sbjct: 207 YNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMI 266

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           ++ + P+  TY  +I G    G+ ++ + ML E+   G+ PD  T+  ++   C +G+  
Sbjct: 267 DKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCT 326

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +A +  + M+ K  KPD+    I+L G   +G L +   F    +  G + +   +N + 
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVF 386

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ------------ 450
            +  K+  + +A  + ++M ++ L P+   YA +  AL + GR+++A+            
Sbjct: 387 CAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVA 446

Query: 451 ----KFTSIMVETGKIN-------------HQVVQPNTS----------------KTPEE 477
                FTS++     I+             +Q + PN                  K    
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL 506

Query: 478 ID--------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ID        P  ISY+  I  HC  G+  +A ++ +     G+  N+ TY  L++G
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 263/522 (50%), Gaps = 18/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++DAL K+GK+ E + +L+ M K  +  N  TY+ L+ GY  +  +K+A  V
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M+     PDV +YN++ING+C    +++A  L KEM  L   P ++ +N +++ F +
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM-ILSRFPPIIQFNKILDSFAK 319

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                 A  L   L+  GI+P+  T NI+I  +C  G+I     ++  + + G+ P  VT
Sbjct: 320 MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVT 379

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            NTLI   C  G +++A    D +  +G ++N ++  T+++ +C       A  LL    
Sbjct: 380 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 439

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            R    +   Y T+I    + +  + A  L+ EM  + I     TY+ +I+G    GK +
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +AI +LNE++   + PD  T+  ++     EG+V++A      M++   KPD+ T N L+
Sbjct: 500 EAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +G      ++KA   F +  L G   D  TY  LI+  CK + +++A  L  EM +K + 
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV 619

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY+++   L +SGR+         M + G+             P ++    I+Y+ 
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ-------------PADV----ITYNS 662

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+  C  G    A+ +F + + +GI  N  T+  L++GL K
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCK 704



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 244/457 (53%), Gaps = 2/457 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T N +++     G++     +L+ + K+G  P+  T N L+ G C  G +K+A
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396

Query: 65  MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +   D L+ Q   L  V +Y  LING C  G    A +L ++++     P+V  Y+T+I+
Sbjct: 397 LHFHDKLLAQGFQLNQV-SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +     EA+ L  E+   GI  + VT++ +I  +C  GK+ +A  ++  M     +P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TY  L+DA  K G ++EA  ++ VM +  +K +  T NT+++      ++ +A  + 
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N+ S  G   D  +Y  LI G+ + +  + AL L+ EM ++ ++P T TY++++ GL +S
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+     D+++E+   G   D  T+N++I G C  G ++KA+   NKM ++  +P+  T 
Sbjct: 636 GRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            ILL GLC+ G L+ A + F+  + KG  +D   YN +I   CK+  LE+A  +LS+MEE
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEE 755

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
               P+  T+  I  AL +    ++A+K    M+  G
Sbjct: 756 NGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 278/579 (48%), Gaps = 56/579 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT NT++  L  KG++ E       +  QG   N+ +Y  L++G C++G  + A
Sbjct: 58  GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++ +  +    + P+V  YN +I+  C   ++ EA+ L  EM    +  +VVTY+TLI  
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G+  EA  L++ +    I PN  T+NI++   CKEGK+ +A  ++  M +     +
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY+TL+D       +++A  + + M   G+  +  + N +++  C  K++D+A  L  
Sbjct: 238 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFK 297

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                  +   + +  ++  + + +  + A+ L   ++ + I P  FT N +I      G
Sbjct: 298 EMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMG 356

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +      +L ++L+ G  P   T NT+I G C +GQV+KAL FH+K++ + F+ + V+  
Sbjct: 357 QITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 416

Query: 365 ILLSGLCREG-----------------------------------ILEKALKFFRSWILK 389
            L++G+C+ G                                   ++ +A   F    +K
Sbjct: 417 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 476

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G + D VTY+TLI   C   +L++A GLL+EM  K + PD  TY  +  AL + G+++EA
Sbjct: 477 GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEA 536

Query: 450 QKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKIN 490
           +   ++M++   +   V   NT                   + +   + P   +Y+  IN
Sbjct: 537 KSVLAVMLKAC-VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 595

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             C      +AL +F+E  QK +  +  TY +L++GL K
Sbjct: 596 GFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 161/280 (57%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++DAL K+GK+ E + +L+ M K  + P+  TYN L++GY  +  +K+A  V
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M+     PDV TY +LING+C + M++EA  L KEM    ++PD VTY++L++   +
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR    + LIDE+ + G   + +T+N +I   CK G +DKA  +   M++ G  P+  T
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +  L+D  CK G +++A  +   +  KG  ++    N +++  C +  L+EA  +L+   
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           + G   + V++  +I   F+ ++ ++A KL  +M  R ++
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 171/318 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D VTY+T++      GKL E   LL++M  + + P+  TY ILV    K G +KEA
Sbjct: 477 GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEA 536

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+ +M +    PDV+TYN L+NG+     +++A  +   M  + + PDV TY  LIN 
Sbjct: 537 KSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 596

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +S    EA  L  E+ +  + P+ VT++ ++   CK G+I     ++  M + G   D
Sbjct: 597 FCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPAD 656

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+LID  CK G++++A  + + M  +G++ NT T   +L  LC   +L +A  +  
Sbjct: 657 VITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 716

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +GY+LD   Y  +I G+ +      AL +  +M+E   +P+  T++ +I  L +  
Sbjct: 717 DLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKD 776

Query: 305 KTEQAIDMLNELLQSGMI 322
           + ++A  +L +++  G++
Sbjct: 777 ENDKAEKLLRQMIARGLL 794



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 192/396 (48%), Gaps = 18/396 (4%)

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           +  ++ ++ + G  P+ VT N +IK  C +G++ +A      +   GF  + V+Y TLI+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C+ G+   A + +  +  +  K N    NTI+  LC  + + EAY L +  + +G   
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + V+Y TLI G+    K   AL L + M  + I P+  TYN ++  L + GK ++A  +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             +L++ +  +  T++T++ G+    +V+KA    N M      PD+ + NI+++G C+ 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             ++KAL  F+  IL  +    + +N ++ S  K +    A  L   +E K + PD +T 
Sbjct: 287 KRVDKALNLFKEMIL-SRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +       G++       + +++ G                   PS+++ +  I   C
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRG-----------------YPPSTVTLNTLIKGLC 388

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +G+ K AL   ++   +G  +N+ +Y  L+NG+ K
Sbjct: 389 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 117/216 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY  +++   K   ++E  +L  +M ++ +VP+  TY+ LV G CK G 
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     ++D M       DV TYN LI+G C  G L++A  L  +M+   + P+  T+  
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + GR  +A ++  +L   G   +   +N+MI  +CK+G +++A  ++  MEENG
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             P+ VT++ +I+A  K    ++A +++  M  +GL
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 65/112 (58%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+  T+  +LD L K G+L + +++  D+  +G   +   YN+++ G+CK G 
Sbjct: 683 MKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGL 742

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
           L+EA+ ++  M +N  +P+  T++++IN        ++A +L ++M +  LL
Sbjct: 743 LEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 235/463 (50%), Gaps = 1/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T+ T++    ++G +     + + M + G    + T N+L++GYCKLG 
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+  +     +   PD  TYN  +NG C    +  A ++   M      PDV TYN 
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++G+  EA  +++++ + G  P+  T N +I   C   ++++A  + R +   G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  T+N LI+A CK G+   A R+ + M   G   + +T NT++  LC   KL +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G     ++Y T+I G  +  +   A +++D+M  + I  +  T+N +I GL
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K + A +++N+++  G+ P+  T+N+I+  +C +G ++KA      M    F+ D+
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++GLC+ G  + ALK  R   +KG       YN ++ SL +   + DA  L  E
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           M E    PD  TY  +   L    G ++EA  F   MV+ G I
Sbjct: 627 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 260/536 (48%), Gaps = 17/536 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D V YN +L+ L +  K+  +  + S+M  +G+ P+  T+N L+   C+   ++ 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +++ M+     PD  T+  L+ G+   G +E A R++  M  +      VT N LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + GR  +A   I +    G +P+ +T+N  +   C+   +  A K++  M + G  P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN +++  CK G +EEA  +++ M  +G   +  T NT++  LC   +L+EA  L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +G   D  ++  LI    +    + AL+L++EMK     P   TYN +I  L   
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A+D+L ++  +G      T+NTII G C + ++E+A +  ++M  +    + +T 
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC++  ++ A +     I +G   +++TYN++++  CK+  ++ A  +L  M  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
                D  TY  +   L ++GR + A K    M   G                 + P+  
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG-----------------MRPTPK 602

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +Y+  +     +   +DAL +F E  + G   +  TY  +  GL +    I +A D
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 207/369 (56%), Gaps = 1/369 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN +++ L K G+L E + +L+ M  +G +P+ TT+N L++  C    L+EA+ +
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +T     PDV+T+N+LIN  C  G    A RL +EM++    PD VTYNTLI+    
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L+ +++  G   + +T+N +I   CK+ +I++A ++   M+  G S + +T
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NTLID  CK   +++AF +++ M  +GL+ N IT N+IL   C +  + +A  +L + +
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+ +D V+YGTLI G  +  +   ALK+   M+ + + P+   YN ++  L +     
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            A+ +  E+ + G  PD  T+  +  G C   G +++A  F  +MV+K F P+  +  +L
Sbjct: 619 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 678

Query: 367 LSGLCREGI 375
             GL   G+
Sbjct: 679 AEGLLNLGM 687



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 180/336 (53%), Gaps = 1/336 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD  T+NT++ AL    +L E  DL   +  +G+ P+  T+NIL++  CK+G    A
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ + M  +   PD  TYN LI+  C+ G L +A  L K+MES       +TYNT+I+ 
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++ D++D  GI  NA+T N +I   CK+ KID A +++  M   G  P+
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+++   CK G++++A  +++ M   G +++ +T  T+++ LC   +   A  +L 
Sbjct: 531 NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 590

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G      +Y  ++   FR      AL L+ EM E    P   TY  +  GL + G
Sbjct: 591 GMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650

Query: 305 -KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
              ++A D + E++  G IP+ ++F  +  G  + G
Sbjct: 651 GPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 55/270 (20%)

Query: 296 MIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           ++  L +    + A+ MLN  L +    P    +  II    + G ++       +M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWI--LKGKAVDSVTY-------------- 398
             +  +   +  L     + + + A+    + +  L G   D+V Y              
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 399 ---------------------NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
                                NTL+ +LC+  ++  A  +L EM  + + PD  T+  + 
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
              VE G +E A +  + M+E G                    + ++ +  IN +C  GR
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMG-----------------CSATKVTVNVLINGYCKLGR 266

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +DAL   ++    G   ++ TY   +NGL
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGL 296


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 274/559 (49%), Gaps = 54/559 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN +L +L  +G L+    L   ++++ + P+R TY+ L+ G  K   L  A+ +
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDL 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYNTLINRFF 126
           +D M +++  PDV  YN L+ G   AG  E+  R+  K ++     P++ TYN +++   
Sbjct: 216 LDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + GR  E  ++ + +  + ++P+ +T+ I+I   C+ G +D A ++   + + G   D  
Sbjct: 276 KFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAA 335

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLK----------------------------- 217
            YN+L+   C+AG ++EA++  D  G  GL+                             
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 218 ------MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                  +T+T  T++H LC     ++A+ +   A   G  LD  SY ++I G     + 
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A+K++++M +    P++  YNA+I G  Q  +T  A+ + +++  +G  P   T+NT+
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G C   + ++A     +MVE  F PDI T   L+ GL  +  ++ AL  ++  + KG 
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTALVESGRLEEAQ 450
            VD + +N LI  LC   ++++A  + S+M+EKK   P+  TY  +   L E+G +++A 
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
              + + E G                 ++P  ISY+ +I   CS  R  + +Q+ +E   
Sbjct: 636 TLWTSITEDG-----------------LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 511 KGIAINKSTYMNLMNGLIK 529
           +GI     T+  L+  +IK
Sbjct: 679 RGIIPTVITWNILVRAVIK 697



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 261/535 (48%), Gaps = 33/535 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG----LVPNRTTYNILVSGYCKLG 59
            GC P   ++N +LDA  +  + ++     + +        + PN  TYNI++   C  G
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            L  A+ + D + + +  PD  TY+ L+ G      L+ A  L  EM   ++ PDVV YN
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232

Query: 120 TLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            L+   F++G   +  ++ D+L  + G +PN  T+N+M+   CK G+  +  ++   M  
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           N   PD +TY  LI   C++G+++ A R+   + + GL ++    N+++   C   ++ E
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMI 297
           A+   +SA   G   +  +Y  +I G F     + A++LWD + K+   +P T T+  +I
Sbjct: 353 AWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL Q+G   +A  +  E   SG   D  +++++I+G C+ G++  A++ + KM +   K
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+    N L+SG C+      A++ +      G +   +TYNTLI  LCK  + ++A  +
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKIN---HQVVQPNTSK 473
             EM E    PD  TY ++   L    ++++A   +  I+ +  K++   H ++      
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL------ 585

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ-KGIAINKSTYMNLMNGL 527
                          I+  CS G+  +AL +F + ++ K    N  TY  LM+GL
Sbjct: 586 ---------------IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGL 625



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 222/445 (49%), Gaps = 3/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN +LD L K G+  EV ++   M    L P+  TY IL+ G C+ G +  A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV   + +   + D   YN L+ G+C AG ++EA++   +      L ++ TYN +I  
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKG 377

Query: 125 FFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F+SG   EA +L D L++     P+ VT   +I   C+ G  +KA  I      +G   
Sbjct: 378 LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL 437

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  +Y+++I+  C  G + +A ++ + M + G K N+   N ++   C   +  +A  + 
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  +  G     ++Y TLI G  + EK   A  +  EM E    P   TY ++I GL   
Sbjct: 498 SKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD 557

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPDIVT 362
            K + A+ +  ++L  G+  D    N +IHG CS G+V++AL   + M E K+  P++VT
Sbjct: 558 KKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVT 617

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ GL   G ++KA   + S    G   D ++YNT I  LC   R+ +   LL E+ 
Sbjct: 618 YNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL 677

Query: 423 EKKLGPDRYTYAAIHTALVESGRLE 447
            + + P   T+  +  A+++ G ++
Sbjct: 678 SRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 233/515 (45%), Gaps = 27/515 (5%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN---- 74
           A+     L+  R L S +   G  P   ++N L+  + +     +A      ++      
Sbjct: 96  AIMPDAALDAFRALPSIL---GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGR 152

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           +  P++ TYN+++   C  G L+ A  L   +   ++ PD +TY+TL+    +  R   A
Sbjct: 153 RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHA 212

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLID 193
             L+DE+    ++P+ V +N ++    K G+ +K  ++   + ++ G  P+  TYN ++D
Sbjct: 213 LDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK G  +E   + + M    L+ + IT   ++H LC    +D A  + +   K G  +
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D   Y +L+ G+ +  +   A K WD      +  +  TYN MI GL  SG  ++AI++ 
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 314 NELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + L +    IPD  TF T+IHG C  G   KA     +      + D+ + + +++GLC 
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G L  A+K +      G   +S  YN LIS  C+  R  DA  + S+M +    P   T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +   L ++ + +EA      MVE G                   P   +Y   I   
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENG-----------------FTPDITTYGSLIRGL 554

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            S  +  DAL I+++   KG+ ++   +  L++GL
Sbjct: 555 FSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 180/342 (52%), Gaps = 2/342 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWL 61
           GF  L +  TYN ++  LF  G ++E  +L   ++K    +P+  T+  L+ G C+ G+ 
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFA 420

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  + +    +    DV++Y+ +ING CN G L +A ++ ++M+     P+   YN L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ F +  R+ +A ++  ++ ++G  P  +T+N +I   CK  K  +A  + R M ENGF
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-Y 240
           +PD  TY +LI        +++A  +   +  KGLK++ +  N ++H LC   K+DEA +
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +  +   K+    + V+Y TL+ G +     ++A  LW  + E  + P   +YN  I GL
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
               +  + I +L+E+L  G+IP   T+N ++      G ++
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 222/490 (45%), Gaps = 60/490 (12%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           ++++ +  A M + A    + + S L   P + ++N L++ F  + R  +A      L  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASL-S 146

Query: 144 HG-----IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           HG     I PN  T+NI+++  C  G +D+A  +  ++     +PD +TY+TL+    K 
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK-RGYYLDEVS 257
             ++ A  ++D M R  ++ + +  N +L       + ++   + +   K  G   +  +
Sbjct: 207 DRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  ++ G  +  +     ++W+ M    + P   TY  +I GL +SG  + A  + +E++
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQF--------------HNKMVEKSFK------ 357
           ++G++ D   +N+++ GFC  G+V++A +F              +N M++  F       
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDE 386

Query: 358 ---------------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
                          PD VT   L+ GLC+ G   KA   F    + GK +D  +Y+++I
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           + LC   RL DA  +  +M++    P+ + Y A+ +   +  R  +A +  S M + G  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG-- 504

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                            P+ I+Y+  I+  C   +Y++A  +  E  + G   + +TY +
Sbjct: 505 ---------------CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 523 LMNGLIKRRK 532
           L+ GL   +K
Sbjct: 550 LIRGLFSDKK 559



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P++  YN ++    +  + ++   + S M   G  P   TYN L+ G CK   
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA  V   M +N   PD+ TY  LI G  +   +++A  + K++    L  DV+ +N 
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNI 584

Query: 121 LINRFFESGRSMEAFKLIDELDE-HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LI+    +G+  EA  +  ++ E     PN VT+N ++    + G IDKA  +  ++ E+
Sbjct: 585 LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITED 644

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           G  PD ++YNT I   C    + E  +++D +  +G+    IT N ++  +
Sbjct: 645 GLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 235/442 (53%), Gaps = 2/442 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G+G  P  VT N++L+      +++E   L+  M + G  P+  T+  LV G  +     
Sbjct: 130 GYG--PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA+ +V+ M      PD+ TY  +ING C  G  + A  L  +ME  K+  DVV Y+T+I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   +     +A  L  E+D  GI+P+  T++ +I   C  G+   A +++ +M E   +
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ VT+N+LIDA  K G + EA ++ D M ++ +  N +T N++++  C   +LDEA  +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                 +    D V+Y TLI G+ + +K    ++L+ +M  R ++ +T TY  +I G  Q
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +   + A  +  +++  G+ P+  T+NT++ G C  G++EKA+     + +   +PDI T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            NI+  G+C+ G +E     F S  LKG   D + YNT+IS  CK+   E+A+ L  +M+
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547

Query: 423 EKKLGPDRYTYAAIHTALVESG 444
           E    PD  TY  +  A +  G
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDG 569



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 142/445 (31%), Positives = 238/445 (53%), Gaps = 1/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT+ T++  LF+  K +E   L+  M  +G  P+  TY  +++G CK G    A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +++ M + K   DV  Y+ +I+  C    +++A  L  EM++  + PDV TY++LI+ 
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  +A +L+ ++ E  I PN VT N +I  + KEGK+ +A K+   M +    P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+LI+  C    ++EA ++  +M  K    + +T NT+++  C  KK+ +   L  
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+RG   + V+Y TLI G+F+    + A  ++ +M    + P+  TYN ++ GL ++G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+A+ +   L +S M PD  T+N +  G C  G+VE        +  K  KPD++  N
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++SG C++G+ E+A   F      G   DS TYNTLI +  ++     +  L+ EM   
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
           +   D  TY  + T ++  GRL++ 
Sbjct: 585 RFAGDASTYGLV-TDMLHDGRLDKG 608



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 264/524 (50%), Gaps = 19/524 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V ++ +L A+ K  K + V      M+  G+  N  TYNI+++  C+   L  A+ 
Sbjct: 62  FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T N L+NG+C+   + EA  L  +M  +   PD VT+ TL++  F
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +  ++ EA  L++ +   G +P+ VT+  +I   CK G+ D A  ++  ME+     D V
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+T+ID+ CK  ++++A  +   M  KG++ +  T ++++  LC   +  +A  LL+  
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++ +LI  + ++ K   A KL+DEM +R I P+  TYN++I G     + 
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  +   ++    +PD  T+NT+I+GFC   +V   ++    M  +    + VT   L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  +    + A   F+  +  G   + +TYNTL+  LCK  +LE A  +   +++ K+
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
            PD YTY  +   + ++G++E+    F S+ ++                   + P  I+Y
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG------------------VKPDVIAY 523

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I+  C +G  ++A  +F + ++ G   +  TY  L+   ++
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 230/472 (48%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +   M +++  P +  ++ L++        +      ++ME L +  ++ TYN 
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN      +   A  ++ ++ + G  P+ VT N ++  +C   +I +A  +V  M E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD VT+ TL+    +     EA  +++ M  KG + + +T   +++ LC   + D A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   K     D V Y T+I    +    + AL L+ EM  + I P  FTY+++I  L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++L+  + P+  TFN++I  F  EG++ +A +  ++M+++S  P+I
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L++G C    L++A + F   + K    D VTYNTLI+  CK +++ D   L  +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L  +  TY  +     ++   + AQ     MV  G                 + P
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG-----------------VHP 448

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++Y+  ++  C  G+ + A+ +FE  ++  +  +  TY  +  G+ K  K
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 176/370 (47%), Gaps = 17/370 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D+A  +   M ++   P  V ++ L+ A  K    +      + M   G+  N  T N
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++ LC   +L  A  +L    K GY    V+  +L+ G+    + + A+ L D+M E 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P T T+  ++ GL Q  K  +A+ ++  ++  G  PD  T+  +I+G C  G+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L   NKM +   + D+V  + ++  LC+   ++ AL  F     KG   D  TY++LIS 
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M E+K+ P+  T+ ++  A  + G+L EA+K    M++      
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ------ 338

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP+ ++Y+  IN  C   R  +A QIF     K    +  TY  L+
Sbjct: 339 -----------RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387

Query: 525 NGLIKRRKSI 534
           NG  K +K +
Sbjct: 388 NGFCKAKKVV 397


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 267/523 (51%), Gaps = 20/523 (3%)

Query: 7   LP-DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP D V YNT++    + G+++  R +L  MK+ G+ PN  TY   +  YC+   ++EA 
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M +N  L DV T + L+ G C  G   EA+ L +EM+ +  +P+ VTY TLI+  
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSL 319

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++GR  E   L+ E+   G+  + VT+  ++ W  K+GK D+    +R    +  S + 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNG 379

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY  LIDA CKA N++EA +++  M  K +  N +T +++++       LD+A      
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG   + V+YGTLI G+F+ +  + AL+++ +M    +  + F  ++++ GL Q+GK
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGK 499

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A+ +  +   SG+  D   + T+I G    G +  A +F  ++++++  PD V  N+
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            ++ LC  G  ++A          G   D  TYNT+I S C++     A  LL EM+   
Sbjct: 560 FINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P+  TY  +   L  +G +E+A+   + MV  G                   PSS+++
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG-----------------FSPSSLTH 662

Query: 486 SEKINEHCSQGRYKDA-LQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ + CSQ R  D  L I E     G+  + + Y  L+  L
Sbjct: 663 -RRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 258/525 (49%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + D VTY  ++D L K+GK +EV+D L       L  N  TY +L+   CK   + EA
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEA 398

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+  M +    P+V T++ +ING+   G+L++A   ++ M+   + P+VVTY TLI+ 
Sbjct: 399 EQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+      A ++  ++   G++ N    + ++    + GKI++A  + ++   +G S D
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLD 518

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TLID   KAG+M  AF+    +  + +  + +  N  ++ LC   K  EA  +L 
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILT 578

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y T+I  + R  +  +ALKL  EMK   I P+  TYN ++ GL  +G
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A  +LNE++ +G  P   T   ++       +++  L  H  M+      DI   N
Sbjct: 639 AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  LC  G+  KA       +  G A D++T+N LI   CK   L++AF   ++M  +
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  T+  +   L   GR+ EA    ++++E  K                ++P++++
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAG---TVLIEMEK--------------SGLEPNNLT 801

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y   +  H  Q    +A++++ E   KG     STY  L++   K
Sbjct: 802 YDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 250/556 (44%), Gaps = 56/556 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V YN +L AL        V   L++M K+G+  +  T N L++G C+ G +  A  +
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D      +L DV  +N LI G+C  G    A  +   M +  L  DVV YNTL+  F  
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY--------------------------- 160
           +G+   A  ++D + E G+ PN  T+   I +Y                           
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 161 --------CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                   C++G+  +A  + R M++ G  P+ VTY TLID+  KAG  +E   ++  M 
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G+ M+ +T   ++  L  + K DE    L  A      L+ V+Y  LI    +    +
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A ++  EM+E+ I P+  T++++I G  + G  ++A +    + + G+ P+  T+ T+I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            GF      + AL+ ++ M+ +  + +    + L++GL + G +E+A+  F+     G +
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +D V Y TLI  L K   +  AF    E+ ++ + PD   Y      L   G+ +EA+  
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI 576

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
            + M   G                 + P   +Y+  I  HC +G    AL++  E +   
Sbjct: 577 LTEMRNMG-----------------LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 513 IAINKSTYMNLMNGLI 528
           I  N  TY  L+ GL 
Sbjct: 620 IKPNLITYNTLVAGLF 635



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 214/439 (48%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           +++++ L + GK+ E   L  D    GL  +   Y  L+ G  K G +  A +    +  
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
              LPD   YN+ IN  C  G  +EA  +  EM ++ L PD  TYNT+I      G + +
Sbjct: 548 RNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A KL+ E+    IKPN +T+N ++      G ++KA  ++  M   GFSP  +T+  ++ 
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A  ++  ++    + + M   GL  +    NT+L  LC      +A ++L      G   
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D +++  LI G+ +    + A   + +M  + I P+  T+N ++ GL   G+  +A  +L
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E+ +SG+ P+  T++ ++ G   +    +A++ + +MV K F P + T N L+S   + 
Sbjct: 788 IEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++ +A + F+    +G    S TY+ L+S   + R   +    L +M+EK   P + T 
Sbjct: 848 GMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTL 907

Query: 434 AAIHTALVESGRLEEAQKF 452
           + I  A  + G   +AQ+ 
Sbjct: 908 SFICRAFSKPGMTWQAQRL 926



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 221/453 (48%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT++++++   K+G L++  +    MK++G+ PN  TY  L+ G+ K      A+ V
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M       + +  + L+NG    G +EEA  L K+     L  D V Y TLI+  F+
Sbjct: 472 YHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G    AFK   EL +  + P+AV +N+ I   C  GK  +A  I+  M   G  PD  T
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQST 591

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT+I ++C+ G   +A +++  M    +K N IT NT++  L     +++A  LLN   
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV 651

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+    +++  ++    +  + +  L + + M    +      YN ++  L   G T 
Sbjct: 652 SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L E+L SG+ PD  TFN +I G C    ++ A   + +M+ ++  P+I T N LL
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLL 771

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL   G + +A          G   +++TY+ L++   K+    +A  L  EM  K   
Sbjct: 772 GGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFV 831

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           P   TY A+ +   ++G + +A++    M + G
Sbjct: 832 PKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 211/451 (46%), Gaps = 30/451 (6%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D  + N L+   C   +L  A  L +        P  V YN L+    +      A  ++
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHA---HAPAVL 123

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG--FSPDCVTYNTLIDANC 196
            E+ + G+  + VT N ++   C+ G++D A  +    +  G   + D + +NTLI   C
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALA---DRGGGIHALDVIGWNTLIAGYC 180

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           + G+   A  + D M  +GL M+ +  NT++   C   ++D A  +L+   + G   +  
Sbjct: 181 RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y   I  Y R +    A  L++ M    ++    T +A++ GL + G+  +A  +  E+
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            + G +P+  T+ T+I      G+ ++ L    +MV +    D+VT   L+  L ++G  
Sbjct: 301 DKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           ++     R  +    +++ VTY  LI +LCK   +++A  +L EMEEK + P+  T++++
Sbjct: 361 DEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
               V+ G L++A ++  +M E G                 I+P+ ++Y   I+      
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERG-----------------INPNVVTYGTLIDGFFKFQ 463

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
               AL+++ +   +G+ +NK    +L+NGL
Sbjct: 464 GQDAALEVYHDMLCEGVEVNKFIVDSLVNGL 494



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 187/406 (46%), Gaps = 40/406 (9%)

Query: 136 KLIDELDEHGIKPNAV--------THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +LI  L   G+   A+        + N ++  +C+   +  A  ++R+       P  V 
Sbjct: 51  RLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVA 105

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+ A     +   A  ++  M ++G+  + +T+NT+L  LC   ++D A  L    +
Sbjct: 106 YNILLAA---LSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL----A 158

Query: 248 KRG---YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            RG   + LD + + TLI GY R      AL + D M  + +      YN ++ G  ++G
Sbjct: 159 DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A  +L+ + ++G+ P+  T+   I  +C    VE+A   +  MV      D+VT +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++GLCR+G   +A   FR     G   + VTY TLI SL K  R ++   LL EM  +
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  D  TY A+   L + G+ +E +      +                  + +  + ++
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS-----------------DNLSLNGVT 381

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           Y+  I+  C      +A Q+  E  +K I+ N  T+ +++NG +KR
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 151/351 (43%), Gaps = 35/351 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT++ +  +KG+  +   LL +MK   + PN  TYN LV+G    G 
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 61  LKEA-------------------MRVVDLMTQNKSL----------------PDVWTYNM 85
           +++A                    RV+   +Q++ L                 D+  YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+   C  GM  +A  + +EM    + PD +T+N LI    +S     AF    ++    
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I PN  T N ++      G+I +A  ++  ME++G  P+ +TY+ L+  + K  N  EA 
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAM 819

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R+   M  KG      T N ++        + +A  L     KRG +    +Y  L++G+
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            R        K   +MKE+   PS  T + +    S+ G T QA  +L  L
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 140/338 (41%), Gaps = 38/338 (11%)

Query: 206 RMMDVMGRKGLKMNTI--------TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           R++  +   GL    I        +LN +L++ C  + L  A  LL S+         V+
Sbjct: 51  RLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRSSRP-----TTVA 105

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  L+        A   L    EM +R +     T N ++ GL ++G+ + A  + +   
Sbjct: 106 YNILLAALSDHAHAPAVLA---EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--- 159

Query: 318 QSGMIP--DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + G I   D   +NT+I G+C  G    AL   ++M  +    D+V  N L++G CR G 
Sbjct: 160 RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           ++ A          G   +  TY   I   C+ + +E+AF L   M    +  D  T +A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L   GR  EA      M + G +                 P+ ++Y   I+     
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAV-----------------PNHVTYCTLIDSLAKA 322

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           GR K+ L +  E   +G+ ++  TY  LM+ L K+ K+
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 167/567 (29%), Positives = 276/567 (48%), Gaps = 45/567 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +L++  ++ K++    L  DM   G+ P   T N+L++G C  G  ++A  V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M      P+ +++ +L+ G+C AG+   A  L   M S  + P+ V YNTLI+ F  
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---EENGFS-P 183
            GR+ EA +L++ + E G+ P+ VT N  I   C  GKI +A +I R+M   EE G   P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  T+N +++  CK G +EEA  +++ M R G  M   + N  L  L    KL EA + L
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G   +  S+ T++ G  ++   + A  +   M    I P T TY+ ++ G   +
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A ++L+E+++ G  P+  T N ++H    EG++ +A +   KM E+S+  D VTC
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
           NI++ GLC+ G L++A++      + G A                        D +TY+ 
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSI 533

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----------- 449
           +I+ LCK  RL++A     EM  K L PD   Y     +  + G++  A           
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593

Query: 450 -----QKFTSIMVETGKINH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
                Q + S+++  G  N   ++         + I P+  +Y+  I+  C  GR KDA 
Sbjct: 594 CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDAT 653

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
            + +E  QKGI+ N S++  L+    K
Sbjct: 654 SLLDEMLQKGISPNISSFRLLIKAFCK 680



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 277/576 (48%), Gaps = 44/576 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  P+ V YNT++ +  ++G+  E   L+  M++ GL P+  T+N  +S  C  G 
Sbjct: 212 MGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGK 271

Query: 61  LKEAMRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + EA R+   M  ++ L    P++ T+N+++ G+C  GMLEEA  L + M+    L ++ 
Sbjct: 272 ILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELE 331

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           +YN  +     +G+ +EA   + E+ + GI+PN  + N ++   CK G I  A  I+  M
Sbjct: 332 SYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLM 391

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             +G  PD VTY+TL+   C  G + +A  ++  M R+G   NT T N +LH+L  E ++
Sbjct: 392 ISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRI 451

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--------------- 281
            EA  LL   ++R Y LD V+   +I G  +  K + A+++ + M               
Sbjct: 452 FEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSF 511

Query: 282 --------KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
                     ++ +P   TY+ +I GL ++G+ ++A     E++   + PD   ++T IH
Sbjct: 512 IGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIH 571

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            FC  G++  A +    M ++     + T N L+ GL  +  + +          KG   
Sbjct: 572 SFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITP 631

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +  TYN +IS LC+  R++DA  LL EM +K + P+  ++  +  A  ++      ++  
Sbjct: 632 NICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVF 691

Query: 454 SIMVE---------TGKINHQVVQPNTSKTPEEIDPS--------SISYSEKINEHCSQG 496
            I +          +   N  ++    S+  E  D +        +  Y++ I + C   
Sbjct: 692 EIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDE 751

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             ++A  I  +   KG   + +++M +++GL KR K
Sbjct: 752 MLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGK 787



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 240/477 (50%), Gaps = 38/477 (7%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  L  L + GKL E +  L +M  +G+ PN  ++N ++ G CK G + +A  ++ LM
Sbjct: 332 SYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLM 391

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             +   PD  TY+ L++G C+ G + +A  +  EM      P+  T N L++  ++ GR 
Sbjct: 392 ISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRI 451

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--------- 182
            EA KL+ +++E     + VT NI+I   CK GK+D+A +IV  M  +G +         
Sbjct: 452 FEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSF 511

Query: 183 --------------PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
                         PD +TY+ +I+  CKAG ++EA +    M  K L  ++I  +T +H
Sbjct: 512 IGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIH 571

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           + C   K+  A+ +L    KRG      +Y +LI G     +      L D+MKE+ I P
Sbjct: 572 SFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITP 631

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN MI  L + G+ + A  +L+E+LQ G+ P+ ++F  +I  FC      KA  F 
Sbjct: 632 NICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFC------KASDF- 684

Query: 349 NKMVEKSFKPDIVTC-------NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             +V++ F+  +  C       +++ + L   G + +A + F + + +   + +  YN L
Sbjct: 685 -GVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDL 743

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           I  LCK+  LE+A  +L +M +K    D  ++  +   L + G+  +A +    M++
Sbjct: 744 IEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMD 800


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 235/463 (50%), Gaps = 1/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T+ T++    ++G +     + + M + G    + T N+L++GYCKLG 
Sbjct: 115 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 174

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+  +     +   PD  TYN  +NG C    +  A ++   M      PDV TYN 
Sbjct: 175 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 234

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++G+  EA  +++++ + G  P+  T N +I   C   ++++A  + R +   G
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  T+N LI+A CK G+   A R+ + M   G   + +T NT++  LC   KL +A 
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 354

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G     ++Y T+I G  +  +   A +++D+M  + I  +  T+N +I GL
Sbjct: 355 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 414

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K + A +++N+++  G+ P+  T+N+I+  +C +G ++KA      M    F+ D+
Sbjct: 415 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 474

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++GLC+ G  + ALK  R   +KG       YN ++ SL +   + DA  L  E
Sbjct: 475 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 534

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           M E    PD  TY  +   L    G ++EA  F   MV+ G I
Sbjct: 535 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 577



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 263/536 (49%), Gaps = 17/536 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D V YN +L+ L +  K+  +  + S+M  +G+ P+  T+N L+   C+   ++ 
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +++ M+     PD  T+  L+ G+   G +E A R++  M  +      VT N LIN
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + GR  +A   I +    G +P+ +T+N  +   C+   +  A K++  M + G  P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN +++  CK G +EEA  +++ M  +G   +  T NT++  LC   +L+EA  L 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +G   D  ++  LI    +    + AL+L++EMK     P   TYN +I  L   
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A+D+L ++  +G      T+NTII G C + ++E+A +  ++M  +    + +T 
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC++  ++ A +     I +G   +++TYN++++  CK+  ++ A  +L  M  
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 467

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
                D  TY  +   L ++GR + A K    M   G      ++P    TP+  +P   
Sbjct: 468 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG------MRP----TPKAYNPVLQ 517

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           S   + N        +DAL +F E  + G   +  TY  +  GL +    I +A D
Sbjct: 518 SLFRRNN-------IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 566



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 207/369 (56%), Gaps = 1/369 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN +++ L K G+L E + +L+ M  +G +P+ TT+N L++  C    L+EA+ +
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +T     PDV+T+N+LIN  C  G    A RL +EM++    PD VTYNTLI+    
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L+ +++  G   + +T+N +I   CK+ +I++A ++   M+  G S + +T
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NTLID  CK   +++AF +++ M  +GL+ N IT N+IL   C +  + +A  +L + +
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 466

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+ +D V+YGTLI G  +  +   ALK+   M+ + + P+   YN ++  L +     
Sbjct: 467 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 526

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            A+ +  E+ + G  PD  T+  +  G C   G +++A  F  +MV+K F P+  +  +L
Sbjct: 527 DALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRML 586

Query: 367 LSGLCREGI 375
             GL   G+
Sbjct: 587 AEGLLNLGM 595



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 180/336 (53%), Gaps = 1/336 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD  T+NT++ AL    +L E  DL   +  +G+ P+  T+NIL++  CK+G    A
Sbjct: 259 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 318

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ + M  +   PD  TYN LI+  C+ G L +A  L K+MES       +TYNT+I+ 
Sbjct: 319 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 378

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++ D++D  GI  NA+T N +I   CK+ KID A +++  M   G  P+
Sbjct: 379 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 438

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+++   CK G++++A  +++ M   G +++ +T  T+++ LC   +   A  +L 
Sbjct: 439 NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 498

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G      +Y  ++   FR      AL L+ EM E    P   TY  +  GL + G
Sbjct: 499 GMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 558

Query: 305 -KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
              ++A D + E++  G IP+ ++F  +  G  + G
Sbjct: 559 GPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 65/175 (37%), Gaps = 52/175 (29%)

Query: 388 LKGKAVDSVTY-----------------------------------NTLISSLCKERRLE 412
           L G   D+V Y                                   NTL+ +LC+  ++ 
Sbjct: 47  LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 106

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  +L EM  + + PD  T+  +    VE G +E A +  + M+E G            
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG------------ 154

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   + ++ +  IN +C  GR +DAL   ++    G   ++ TY   +NGL
Sbjct: 155 -----CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 204


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 256/535 (47%), Gaps = 18/535 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +   + Y TI++AL K G        +  + K G + +      L+ G+C+   
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLN 245

Query: 61  LKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L++A++V DLM++  +  P+  +Y++LI+G C  G LEEAF L+ +M      P   TY 
Sbjct: 246 LRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI    + G   +AF L DE+   G KPN  T+ ++I   C++GKI++A  + R M ++
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  +TYN LI+  CK G +  AF ++ VM ++  K N  T N ++  LC   K  +A
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL      G   D VSY  LI G  R+   N A KL   M    + P   T+ A+I  
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + GK + A   L  +L+ G+  DE T  T+I G C+ G+   AL     +V+      
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             + N++L  L +   L++ L         G     VTY TL+  L +   +  +F +L 
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE 605

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M+     P+ Y Y  I   L + GR+EEA+K  S M ++G                 + 
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG-----------------VS 648

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           P+ ++Y+  +  + + G+   AL+      ++G  +N   Y +L+ G +  +K I
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGI 703



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 234/462 (50%), Gaps = 7/462 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P   TY  ++ AL  +G +++  +L  +M  +G  PN  TY +L+ G C+ G ++EA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V   M ++   P V TYN LING+C  G +  AF L   ME     P+V T+N L+  
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A  L+  + ++G+ P+ V++N++I   C+EG ++ A K++ +M      PD
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C+T+  +I+A CK G  + A   + +M RKG+ ++ +T  T++  +C   K  +A  +L 
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILE 535

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  K        S   ++    +  K    L +  ++ +  ++PS  TY  ++ GL +SG
Sbjct: 536 TLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               +  ML  +  SG +P+   +  II+G C  G+VE+A +  + M +    P+ VT  
Sbjct: 596 DISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC------KERRLEDAFGLL 418
           +++ G    G L++AL+  R+ + +G  ++   Y++L+          +E   E    L+
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELI 715

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           S +E+   G        + T L + GR +E+      ++++G
Sbjct: 716 SVVEQLG-GSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSG 756



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 218/494 (44%), Gaps = 66/494 (13%)

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRS--------------------------- 131
           A+   + ME+   +  ++ Y T++N   ++G +                           
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL 238

Query: 132 --------MEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                    +A K+ D +   G   PN+V+++I+I   C+ G++++A  +   M E G  
Sbjct: 239 GFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P   TY  LI A C  G +++AF + D M  +G K N  T   ++  LC + K++EA  +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                K G +   ++Y  LI GY +D +   A +L   M++R   P+  T+N ++ GL +
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK  +A+ +L  +L +G+ PD  ++N +I G C EG +  A +    M     +PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLT 478

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              +++  C++G  + A  F    + KG ++D VT  TLI  +C   +  DA  +L  + 
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID--- 479
           + ++    ++   I   L +  +L+E       +   GKIN   + P+       +D   
Sbjct: 539 KMRMLTTPHSLNVILDMLSKGCKLKEE------LAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 480 ---------------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                                P+   Y+  IN  C  GR ++A ++    +  G++ N  
Sbjct: 593 RSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 519 TYMNLMNGLIKRRK 532
           TY  ++ G +   K
Sbjct: 653 TYTVMVKGYVNNGK 666



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 197/432 (45%), Gaps = 58/432 (13%)

Query: 116 VTYNTLINRFFESGRS-MEAFKLIDELDE----HGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           V ++ ++    E  R   E  KLI   DE     G + N   ++ ++    K      A 
Sbjct: 121 VAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAY 180

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAG------------------------------- 199
              R ME +GF    + Y T+++A CK G                               
Sbjct: 181 VTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGF 240

Query: 200 ----NMEEAFRMMDVMGRKG-LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
               N+ +A ++ D+M R+G    N+++ + ++H LC   +L+EA+ L +   ++G    
Sbjct: 241 CRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS 300

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y  LI         ++A  L+DEM  R   P+  TY  +I GL + GK E+A  +  
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           ++++ G+ P   T+N +I+G+C +G+V  A +    M +++ KP++ T N L+ GLCR G
Sbjct: 361 KMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
              KA+   +  +  G + D V+YN LI  LC+E  +  A+ LL+ M    L PD  T+ 
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFT 480

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
           AI  A  + G+ + A  F  +M+  G                 I    ++ +  I+  C+
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKG-----------------ISLDEVTGTTLIDGVCN 523

Query: 495 QGRYKDALQIFE 506
            G+ +DAL I E
Sbjct: 524 VGKTRDALFILE 535



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 204/450 (45%), Gaps = 76/450 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +TYN +++   K G++    +LL+ M+K+   PN  T+N L+ G C++G   +A
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M  N   PD+ +YN+LI+G C  G +  A++L   M S  L PD +T+  +IN 
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK------------------- 165
           F + G++  A   +  +   GI  + VT   +I   C  GK                   
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545

Query: 166 ----------IDKACKI------VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
                     + K CK+      +  + + G  P  VTY TL+D   ++G++  +FRM++
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE 605

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           +M   G   N      I++ LC   +++EA  LL++    G   + V+Y  ++ GY  + 
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWG------------------------------ 299
           K +RAL+    M ER    +   Y++++ G                              
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGST 725

Query: 300 ----------LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
                     L + G+T+++  ++  +L+SG+   E   + I+  +CS+ +  K ++   
Sbjct: 726 SGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFL-EKAIDIIMESYCSKKKHTKCVELIT 784

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKA 379
            +++  F P   +  +++ GL +EG  E+A
Sbjct: 785 LVLKSGFVPSFKSFCLVIQGLKKEGDTERA 814


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 240/442 (54%), Gaps = 1/442 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+NT++  LF +GK++E   L+  M + G  P+  TYN +V+G C+ G    A+ +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +     DV+TY+ +I+  C  G ++ A  L KEME+  +   VVTYN+L+    +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  +   L+ ++    I PN +T N+++  + KEGK+ +A ++ + M   G SP+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL+D  C    + EA  M+D+M R     + +T  +++   C  K++D+   +  + S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KRG   + V+Y  L+ G+ +  K   A +L+ EM    ++P   TY  ++ GL  +GK E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  +L +S M      + TII G C  G+VE A      +  K  KP+++T  +++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SGLC++G L +A    R     G A +  TYNTLI +  ++  L  +  L+ EM+     
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 428 PDRYTYAAIHTALVESGRLEEA 449
            D  +   +   L+ SG L+++
Sbjct: 576 ADASSIKMVIDMLL-SGELDKS 596



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 234/449 (52%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++   +  K      +L  + K G  P+ TT+N L+ G    G + EA+ +VD M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N   PDV TYN ++NG C +G    A  L ++ME   +  DV TY+T+I+     G  
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L  E++  GIK + VT+N +++  CK GK +    ++++M      P+ +T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D   K G ++EA  +   M  +G+  N IT NT++   C + +L EA  +L+   +   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V++ +LI GY   ++ +  +K++  + +R ++ +  TY+ ++ G  QSGK + A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E++  G++PD  T+  ++ G C  G++EKAL+    + +      IV    ++ G+C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G +E A   F S   KG   + +TY  +IS LCK+  L +A  LL +MEE    P+  
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +  A +  G L  + K    M   G
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCG 573



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 240/532 (45%), Gaps = 52/532 (9%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L  +M +   +P+   ++   S   +       +     +  N    +++T N++IN +C
Sbjct: 75  LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                  A+ +  ++  L   PD  T+NTLI   F  G+  EA  L+D + E+G +P+ V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N ++   C+ G    A  ++R MEE     D  TY+T+ID+ C+ G ++ A  +   M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG+K + +T N+++  LC   K ++  +LL     R    + +++  L+  + ++ K 
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A +L+ EM  R I P+  TYN ++ G     +  +A +ML+ ++++   PD  TF ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 332 I-----------------------------------HGFCSEGQVEKALQFHNKMVEKSF 356
           I                                    GFC  G+++ A +   +MV    
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            PD++T  ILL GLC  G LEKAL+ F         +  V Y T+I  +CK  ++EDA+ 
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           L   +  K + P+  TY  + + L + G L EA      M E G                
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-------------- 540

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
              P+  +Y+  I  H   G    + ++ EE +  G + + S+   +++ L+
Sbjct: 541 ---PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 238/475 (50%), Gaps = 18/475 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ +   M +++ LP +  ++   +               K++E   +  ++ T N +I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F    ++  A+ ++ ++ + G +P+  T N +IK    EGK+ +A  +V  M ENG  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN++++  C++G+   A  ++  M  + +K +  T +TI+ +LC +  +D A  L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                 +G     V+Y +L+ G  +  K N    L  +M  R+I+P+  T+N ++    +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK ++A ++  E++  G+ P+  T+NT++ G+C + ++ +A    + MV     PDIVT
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ G C    ++  +K FR+   +G   ++VTY+ L+   C+  +++ A  L  EM 
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              + PD  TY  +   L ++G+LE+A +    + ++                 ++D   
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-----------------KMDLGI 473

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           + Y+  I   C  G+ +DA  +F     KG+  N  TY  +++GL K + S+S+A
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEA 527



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 20/278 (7%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D K + A+ L+ EM   + +PS   ++     ++++ +    +D   +L  +G+  +  T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            N +I+ FC   +   A     K+++  ++PD  T N L+ GL  EG + +A+      +
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   D VTYN++++ +C+      A  LL +MEE+ +  D +TY+ I  +L   G ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 448 EAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEK 488
            A      M ET  I   VV  N+                        EI P+ I+++  
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++    +G+ ++A ++++E   +GI+ N  TY  LM+G
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 31/235 (13%)

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + AI +  E+++S  +P    F+          Q    L F  ++       +I T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 365 ILLSGLCR-------EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           I+++  CR         +L K +K        G   D+ T+NTLI  L  E ++ +A  L
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKL-------GYEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           +  M E    PD  TY +I   +  SG    A      M E                   
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-----------------RN 223

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +     +YS  I+  C  G    A+ +F+E   KGI  +  TY +L+ GL K  K
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 235/476 (49%), Gaps = 19/476 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  +  +GK+ E   L   M  +G  P+  TY  L++G CK+G    
Sbjct: 125 LGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSA 184

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    P+V+ YN +I+  C    + EAF L  EM +  + PD+ TYN+LI+
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++E+ +  I P+ V+ N ++   CKEGK+ +A  +V  M + G  P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH--------------- 228
           + VTY  L+D +C    M+EA ++ D M  KG   N I+ NT+++               
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYT 364

Query: 229 ----TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
                 CC   +DEA  + ++   +G   + +SY TLI GY + ++ ++A+ L+ EM  +
Sbjct: 365 XLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 424

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +++P T TY+ +I GL    + + AI + +E++    IP+  T+  ++   C    + +A
Sbjct: 425 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 484

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           +     +   +  PDI   NI + G+CR G LE A   F +   KG   D  TY+ +I+ 
Sbjct: 485 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 544

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           LC+   L++A  L  EM+E     +   Y  I    + +     A +    MV  G
Sbjct: 545 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 600



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 238/479 (49%), Gaps = 19/479 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  P+  T + ++++     ++     +L+ + K G  P+  T+  L+ G C  G 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      PDV TY  LING C  G    A RL   M      P+V  YNT
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  E+   GI P+  T+N +I   C   +      ++  M ++ 
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V++NT++DA CK G + EA  ++D M ++G++ N +T   ++   C   ++DEA 
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL-------------------KLWDEM 281
            + ++   +G   + +SY TLI GY + ++ ++A+                   K++D M
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
             +  MP+  +YN +I G  +  + ++A+ +  E+ +  +IPD  T++T+IHG C   ++
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           + A+   ++MV  S  P++VT  ILL  LC+   L +A+   ++        D    N  
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 506

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           I  +C+   LE A  L S +  K L PD +TY+ +   L   G L+EA K    M E G
Sbjct: 507 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 257/550 (46%), Gaps = 37/550 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +N +L ++ K    + +  L   M   G+ PN  T +IL++ +C L  +  A  V
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+  LI G C  G + EA  L  +M      PDVVTY TLIN   +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A +L+  + +   +PN   +N +I   CK+ ++ +A  +   M   G SPD  T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI A C     +    +++ M    +  + ++ NT++  LC E K+ EA+ +++   
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RG   + V+Y  L+ G+    + + A+K++D M  +  MP+  +YN +I G  +  + +
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 308 QAID-------------------MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +AI                    + + ++  G +P+  ++NT+I+G+C   +++KA+   
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            +M  +   PD VT + L+ GLC    L+ A+  F   +   +  + VTY  L+  LCK 
Sbjct: 419 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 478

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           R L +A  LL  +E   L PD          +  +G LE A+   S +   G        
Sbjct: 479 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG-------- 530

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + P   +YS  IN  C +G   +A ++F E  + G  +N   Y  +  G +
Sbjct: 531 ---------LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 581

Query: 529 KRRKSISKAV 538
            R    S+A+
Sbjct: 582 -RNNETSRAI 590



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 192/410 (46%), Gaps = 19/410 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V++NT++DAL K+GK+ E  D++  M ++G+ PN  TY  L+ G+C L  + EA++
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M     +P+V +YN LING+C    +++A                + Y  L++   
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA----------------IHYTXLMDXXC 371

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
                 EA K+ D +   G  PN +++N +I  YCK  +IDKA  +   M      PD V
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY+TLI   C    +++A  +   M       N +T   +L  LC  + L EA  LL + 
Sbjct: 432 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 491

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                  D       I G  R  +   A  L+  +  + + P  +TY+ MI GL + G  
Sbjct: 492 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLL 551

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  +  E+ ++G   +   +NTI  GF    +  +A+Q   +MV + F  D  T  + 
Sbjct: 552 DEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLF 611

Query: 367 LSGLCREGILEKALKFFRS---WILKGKAVDSVTYNTLISSLCKERRLED 413
           +  L  +G+ +   +  R+   WI    +  S   + L   +  ER   D
Sbjct: 612 VKMLSDDGLDQSLKQILRNGCKWISTFDSSSSTGLHILQKGISHERNESD 661



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 174/377 (46%), Gaps = 7/377 (1%)

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           ID A      M      P  V +N L+ +  K  +      +   M   G+  N  TL+ 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++++ C   ++  A+ +L    K G+  D  ++ TLI G   + K   AL L+D+M    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P   TY  +I GL + G T  AI +L  ++Q    P+   +NTII   C + QV +A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
              ++MV K   PDI T N L+  LC     +         +      D V++NT++ +L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CKE ++ +A  ++ +M ++ + P+  TY A+         ++EA K    MV  G + + 
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN- 340

Query: 466 VVQPNTSKTP----EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           V+  NT        + ID  +I Y+  ++  C      +A+++F+    KG   N  +Y 
Sbjct: 341 VISYNTLINGYCKIQRID-KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN 399

Query: 522 NLMNGLIKRRKSISKAV 538
            L+NG  K ++ I KA+
Sbjct: 400 TLINGYCKIQR-IDKAM 415


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 271/526 (51%), Gaps = 20/526 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  + YN IL  L KKG+L E      +MKK    PN +TYN+L+   CK G ++ A
Sbjct: 368 GCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAA 426

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V D M +    P+V T N++I+  C A  L+EA  + + M      PD VT+ +LI+ 
Sbjct: 427 FKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDG 486

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A++L +++ +    PNAV +  +IK + K G+ +   KI + M   G SPD
Sbjct: 487 LGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPD 546

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               N  +D   KAG   +   + + +  +G   + ++ + ++H L       E Y L  
Sbjct: 547 LRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFY 606

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G  LD  +Y T I G+ +  K N+A +L +EMK +   P+  TY ++I GL++  
Sbjct: 607 AMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKID 666

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E   +G+  +   ++++I GF   G++++A     ++++K   P++ T N
Sbjct: 667 RLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 726

Query: 365 ILLSGLCREGILEKALKFFRSWI-LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            LL  L +   + +AL  F++   LKG   + +TY+ LI+ LC+ R+   AF    EM++
Sbjct: 727 CLLDALVKAEEINEALVCFQNMKNLKGTP-NHITYSILINGLCRVRKFNKAFVFWQEMQK 785

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + L P+  TY  +   L ++G + EA    S + E  K N  V             P S 
Sbjct: 786 QGLKPNTITYTTMIAGLAKAGNIAEA----SSLFERFKANGGV-------------PDSA 828

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           SY+  I       R  +A +IFEETR KG  I+  T + L++ L K
Sbjct: 829 SYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQK 874



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 280/583 (48%), Gaps = 55/583 (9%)

Query: 6   CL-PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           CL  D V YN  +D   K GK++       ++K  GL+P+  TY  ++   CK   L EA
Sbjct: 263 CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEA 322

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M QN+++P  + YN +I G+ +AG  +EA+ L +  ++   +P V+ YN ++  
Sbjct: 323 VEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTC 382

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  EA +  +E+ +    PN  T+N++I   CK G+++ A K+   M+E G  P+
Sbjct: 383 LGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPN 441

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T N +ID  CKA  ++EA  + + M  K    + +T  +++  L  + ++D+AY L  
Sbjct: 442 VMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYE 501

Query: 245 SASKRGYYLDEVSYGTLITGYF---RDEKANRALK------------------------- 276
                    + V Y +LI  +F   R E  ++  K                         
Sbjct: 502 QMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAG 561

Query: 277 -------LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
                  L++E+K R  +P   +Y+ +I GL ++G   +  ++   + + G + D   +N
Sbjct: 562 ETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T I GFC  G+V KA Q   +M  K  +P +VT   ++ GL +   L++A   F      
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G  ++ V Y++LI    K  R+++A+ ++ E+ +K L P+ YT+  +  ALV++  + EA
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741

Query: 450 QK-FTSIMVETGKINH-----------QVVQPNTS------KTPEEIDPSSISYSEKINE 491
              F ++    G  NH           +V + N +         + + P++I+Y+  I  
Sbjct: 742 LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
               G   +A  +FE  +  G   + ++Y  ++ GL   R+++
Sbjct: 802 LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAM 844



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 250/553 (45%), Gaps = 33/553 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           + GFG  P   T   ++ +  K  KL E  DL+  M+K    P  + Y  L+     L  
Sbjct: 156 IAGFG--PSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGA---LSS 210

Query: 61  LKEAMRVVDLMTQNKSLP---DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           ++E+  ++ L  Q + L     V  +  +I  +   G L+ A  L  EM+S  L  D+V 
Sbjct: 211 VQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVL 270

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN  I+ F ++G+   A+K   E+  HG+ P+ VT+  MI   CK  ++D+A +I   ME
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           +N   P    YNT+I     AG  +EA+ +++    +G   + I  N IL  L  + +L 
Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG 390

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA        K+    +  +Y  LI    +  +   A K+ D MKE  + P+  T N MI
Sbjct: 391 EALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMI 449

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
             L ++ K ++A  +   +      PDE TF ++I G   +G+V+ A + + +M++    
Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+ V    L+    + G  E   K F+  I +G + D    N  +  + K         L
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE------------------- 458
             E++ +   PD  +Y+ +   LV++G   E  +    M E                   
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629

Query: 459 TGKIN--HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           +GK+N  +Q+++   +K  +   P+ ++Y   I+      R  +A  +FEE +  G+ +N
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQ---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELN 686

Query: 517 KSTYMNLMNGLIK 529
              Y +L++G  K
Sbjct: 687 VVIYSSLIDGFGK 699



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 240/536 (44%), Gaps = 19/536 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            Y+++L  + K  K +    +L +M   G  P+  T   L+    K   L+E   ++  M
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y  LI    +    +    L  +M+ L     V  + T+I  F   GR 
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+  + +  + V +N+ I  + K GK+D A K    ++ +G  PD VTY ++
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CK   ++EA  + + M +          NT++       K DEAY LL     RG 
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               ++Y  ++T   +  +   AL+ ++EMK +   P+  TYN +I  L ++G+ E A  
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + + ++G+ P+  T N +I   C   ++++A      M  K   PD VT   L+ GL 
Sbjct: 429 VRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLG 488

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++G ++ A + +   +   K  ++V Y +LI S  K  R ED   +  EM  +   PD  
Sbjct: 489 KQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR 548

Query: 432 TYAAIHTALVESGR-------LEE--AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS- 481
              A    + ++G         EE  ++ F   ++    + H +V+   ++   E+  + 
Sbjct: 549 LLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM 608

Query: 482 --------SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + +Y+  I+  C  G+   A Q+ EE + KG      TY ++++GL K
Sbjct: 609 KEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 266/524 (50%), Gaps = 19/524 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +N +L A+ K  K + V  L   M++  +V    TYNIL++ +C+   +  A+ 
Sbjct: 44  LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 103

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T + L+NG+C+   + +A  L  +M  +   PD +T+ TLI+  F
Sbjct: 104 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 163

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  L+D + + G +PN VT+ +++   CK G  D A  ++  ME      D V
Sbjct: 164 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 223

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            +NT+ID+ CK  ++++A  +   M  KG++ N +T ++++  LC   +  +A  LL+  
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 283

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++    + V++  LI  + ++ K   A KL+D+M +R I P  FTYN+++ G     + 
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     PD  T+NT+I GFC   +VE   +   +M  +    D VT   L
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL  +G  + A K F+  +  G   D +TY+ L+  LC   +LE A  +   M++ ++
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463

Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             D Y Y  +   + ++G++++    F S+ ++        V+PN            ++Y
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-------VKPNV-----------VTY 505

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I+  CS+   ++A  + ++ ++ G   N  TY  L+   ++
Sbjct: 506 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 549



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 236/444 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT +++L+      ++++   L+  M + G  P+  T+  L+ G      
Sbjct: 108 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 167

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M Q    P++ TY +++NG C  G  + A  L  +ME+ K+  DVV +NT
Sbjct: 168 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E  
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT+N LIDA  K G   EA ++ D M ++ +  +  T N++++  C   +LD+A 
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + D V+Y TLI G+ + ++     +L+ EM  R ++  T TY  +I GL
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  + A  +  +++  G+ PD  T++ ++ G C+ G++EKAL+  + M +   K DI
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                ++ G+C+ G ++     F S  LKG   + VTYNT+IS LC +R L++A+ LL +
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    P+  TY  +  A +  G
Sbjct: 528 MKEDGPLPNSGTYNTLIRAHLRDG 551



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 237/449 (52%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T+ T++  LF   K +E   L+  M ++G  PN  TY ++V+G CK G 
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ +++ M   K   DV  +N +I+  C    +++A  L KEME+  + P+VVTY++
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A +L+ ++ E  I PN VT N +I  + KEGK  +A K+  +M +  
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+L++  C    +++A +M + M  K    + +T NT++   C  K++++  
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S RG   D V+Y TLI G F D   + A K++ +M    + P   TY+ ++ GL
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E+A+++ + + +S +  D   + T+I G C  G+V+        +  K  KP++
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 502

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N ++SGLC + +L++A    +     G   +S TYNTLI +  ++     +  L+ E
Sbjct: 503 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 562

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M   +   D  T   +   L   GRL+++
Sbjct: 563 MRSCRFVGDASTIGLVANML-HDGRLDKS 590



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 253/519 (48%), Gaps = 17/519 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  IL       KL++   L   M K   +P+   +N L+S   K+      + + + M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           + + +  ++TYN+LIN +C    +  A  L  +M  L   P +VT ++L+N +    R  
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L+D++ E G +P+ +T   +I       K  +A  +V  M + G  P+ VTY  ++
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           +  CK G+ + A  +++ M    ++ + +  NTI+ +LC  + +D+A  L      +G  
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V+Y +LI+      + + A +L  +M E++I P+  T+NA+I    + GK  +A  +
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            +++++  + PD  T+N++++GFC   +++KA Q    MV K   PD+VT N L+ G C+
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              +E   + FR    +G   D+VTY TLI  L  +   ++A  +  +M    + PD  T
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y+ +   L  +G+LE+A +    M ++                 EI      Y+  I   
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKS-----------------EIKLDIYIYTTMIEGM 477

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           C  G+  D   +F     KG+  N  TY  +++GL  +R
Sbjct: 478 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 516



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 233/472 (49%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++ LP +  +N L++        +    L ++M+ L+++  + TYN 
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  L+ ++ + G +P+ VT + ++  YC   +I  A  +V  M E G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD +T+ TLI          EA  ++D M ++G + N +T   +++ LC     D A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN         D V + T+I    +    + AL L+ EM+ + I P+  TY+++I  L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + P+  TFN +I  F  EG+  +A + ++ M+++S  PDI
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N L++G C    L+KA + F   + K    D VTYNTLI   CK +R+ED   L  E
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L  D  TY  +   L   G  + AQK    MV  G                 + P
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-----------------VPP 430

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             ++YS  ++  C+ G+ + AL++F+  ++  I ++   Y  ++ G+ K  K
Sbjct: 431 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 168/308 (54%), Gaps = 2/308 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N ++DA  K+GK  E   L  DM K+ + P+  TYN LV+G+C    L +A ++
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      PDV TYN LI G+C +  +E+   L +EM    L+ D VTY TLI   F 
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A K+  ++   G+ P+ +T++I++   C  GK++KA ++   M+++    D   
Sbjct: 410 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+I+  CKAG +++ + +   +  KG+K N +T NT++  LC ++ L EAY LL    
Sbjct: 470 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   +  +Y TLI  + RD     + +L  EM+  + +    T   ++  +   G+ +
Sbjct: 530 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 588

Query: 308 QA-IDMLN 314
           ++ +DML+
Sbjct: 589 KSFLDMLS 596



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 172/368 (46%), Gaps = 17/368 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D A  +   M ++   P  V +N L+ A  K    +    + + M R  +     T N
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C   ++  A  LL    K GY    V+  +L+ GY   ++ + A+ L D+M E 
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P T T+  +I GL    K  +A+ +++ ++Q G  P+  T+  +++G C  G  + A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L   NKM     + D+V  N ++  LC+   ++ AL  F+    KG   + VTY++LIS 
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M EKK+ P+  T+ A+  A V+ G+  EA+K    M++      
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK------ 320

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP   +Y+  +N  C   R   A Q+FE    K    +  TY  L+
Sbjct: 321 -----------RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369

Query: 525 NGLIKRRK 532
            G  K ++
Sbjct: 370 KGFCKSKR 377



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           + KLD+A  L     K       V +  L++   + +K +  + L ++M+  +I+   +T
Sbjct: 25  DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT 84

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I    +  +   A+ +L ++++ G  P   T +++++G+C   ++  A+   ++MV
Sbjct: 85  YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           E  ++PD +T   L+ GL       +A+      + +G   + VTY  +++ LCK    +
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  LL++ME  K+  D   +  I  +L +   +++A      M   G            
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG------------ 252

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P+ ++YS  I+  CS GR+ DA Q+  +  +K I  N  T+  L++  +K  K
Sbjct: 253 -----IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307

Query: 533 SI 534
            +
Sbjct: 308 FV 309


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 237/444 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT +++L+      ++++   L+  M + G  P+  T+  L+ G      
Sbjct: 71  MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M Q    P++ TY +++NG C  G ++ AF L  +ME+ K+  DVV +NT
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E  
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT+N LIDA  K G   EA ++ D M ++ +  +  T N++++  C   +LD+A 
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + D  +Y TLI G+ + ++     +L+ EM  R ++  T TY  +I GL
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  + A  +  +++  G+ PD  T++ ++ G C+ G++EKAL+  + M +   K DI
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                ++ G+C+ G ++     F S  LKG   + VTYNT+IS LC +R L++A+ LL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    PD  TY  +  A +  G
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDG 514



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 263/523 (50%), Gaps = 17/523 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP    +N +L A+ K  K + V  L   M++ G+  N  TYNIL++ +C+   +  A+ 
Sbjct: 7   LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T + L+NG+C+   + +A  L  +M  +   PD +T+ TLI+  F
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  L+D + + G +PN VT+ +++   CK G ID A  ++  ME      D V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            +NT+ID+ CK  ++++A  +   M  KG++ N +T ++++  LC   +  +A  LL+  
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++    + V++  LI  + ++ K   A KL D+M +R I P  FTYN++I G     + 
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     PD  T+NT+I GFC   +VE   +   +M  +    D VT   L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL  +G  + A K F+  +  G   D +TY+ L+  LC   +LE A  +   M++ ++
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D Y Y  +   + ++G++++       +   G      V+PN            ++Y+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG------VKPNV-----------VTYN 469

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I+  CS+   ++A  + ++ ++ G   +  TY  L+   ++
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 236/449 (52%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T+ T++  LF   K +E   L+  M ++G  PN  TY ++V+G CK G 
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  +++ M   K   DV  +N +I+  C    +++A  L KEME+  + P+VVTY++
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A +L+ ++ E  I PN VT N +I  + KEGK  +A K+  +M +  
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+LI+  C    +++A +M + M  K    +  T NT++   C  K++++  
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S RG   D V+Y TLI G F D   + A K++ +M    + P   TY+ ++ GL
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E+A+++ + + +S +  D   + T+I G C  G+V+        +  K  KP++
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N ++SGLC + +L++A    +     G   DS TYNTLI +  ++     +  L+ E
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M   +   D  T   +   L   GRL+++
Sbjct: 526 MRSCRFVGDASTIGLVANML-HDGRLDKS 553



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 229/462 (49%), Gaps = 17/462 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +++ LP ++ +N L++        +    L ++M+ L +  ++ TYN LIN F    +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  L+ ++ + G +P+ VT + ++  YC   +I  A  +V  M E G+ PD +T+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI          EA  ++D M ++G + N +T   +++ LC    +D A+ LLN      
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V + T+I    +    + AL L+ EM+ + I P+  TY+++I  L   G+   A 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+++++  + P+  TFN +I  F  EG+  +A + H+ M+++S  PDI T N L++G 
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C    L+KA + F   + K    D  TYNTLI   CK +R+ED   L  EM  + L  D 
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  +   L   G  + AQK    MV  G                 + P  ++YS  ++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-----------------VPPDIMTYSILLD 403

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             C+ G+ + AL++F+  ++  I ++   Y  ++ G+ K  K
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 168/308 (54%), Gaps = 2/308 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N ++DA  K+GK  E   L  DM K+ + P+  TYN L++G+C    L +A ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      PD+ TYN LI G+C +  +E+   L +EM    L+ D VTY TLI   F 
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A K+  ++   G+ P+ +T++I++   C  GK++KA ++   M+++    D   
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+I+  CKAG +++ + +   +  KG+K N +T NT++  LC ++ L EAY LL    
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D  +Y TLI  + RD     + +L  EM+  + +    T   ++  +   G+ +
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 551

Query: 308 QA-IDMLN 314
           ++ +DML+
Sbjct: 552 KSFLDMLS 559



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 134/277 (48%), Gaps = 17/277 (6%)

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  L++   + +K +  + L ++M+   I  + +TYN +I    +  +   A+ +L +++
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G  P   T +++++G+C   ++  A+   ++MVE  ++PD +T   L+ GL       
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A+      + +G   + VTY  +++ LCK   ++ AF LL++ME  K+  D   +  I 
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
            +L +   +++A      M   G                 I P+ ++YS  I+  CS GR
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKG-----------------IRPNVVTYSSLISCLCSYGR 235

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           + DA Q+  +  +K I  N  T+  L++  +K  K +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 273/583 (46%), Gaps = 64/583 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N +++ L  +G   +   L+  M+K G  P   TYN ++  YCK G  K A+ +
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M       DV TYNMLI+  C +  + + + L ++M    + P+ VTYNTLIN F  
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+ + A +L++E+   G+ PN VT N +I  +  EG   +A K+   ME  G +P  V+
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CK    + A      M R G+ +  IT   ++  LC    LDEA +LLN  S
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470

Query: 248 KRGYYLDEVSYGTLITGY-----FRDEK------------------------------AN 272
           K G   D V+Y  LI G+     F+  K                                
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A+++++ M         FT+N ++  L ++GK  +A + +  +   G++P+  +F+ +I
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G+ + G+  KA    ++M +    P   T   LL GLC+ G L +A KF +S      A
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR------- 445
           VD+V YNTL++++CK   L  A  L  EM ++ + PD YTY ++ + L   G+       
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 710

Query: 446 LEEAQK-------------FTSIMVETGK----INHQVVQPNTSKTPEEIDPSSISYSEK 488
            +EA+              F   M + G+    I  +    N   TP+ +  +++     
Sbjct: 711 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----- 765

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           I+ +   G+ +    +  E   +    N +TY  L++G  KR+
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 250/504 (49%), Gaps = 18/504 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+ +++   K G+    ++++  + + GL PN   Y+ L+   C++G LKEA
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ + M       D +T+N+L+   C AG + EA    + M S  +LP+ V+++ LIN 
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  SG  ++AF + DE+ + G  P   T+  ++K  CK G + +A K ++++     + D
Sbjct: 593 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 652

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V YNTL+ A CK+GN+ +A  +   M ++ +  ++ T  +++  LC + K   A +   
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712

Query: 245 SASKRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            A  RG  L ++V Y   + G F+  +    +   ++M      P   T NAMI G S+ 
Sbjct: 713 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK E+  D+L E+      P+ TT+N ++HG+     V  +   +  ++     PD +TC
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + L+ G+C   +LE  LK  +++I +G  VD  T+N LIS  C    +  AF L+  M  
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             +  D+ T  A+ + L  + R +E++     M + G                 I P S 
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-----------------ISPESR 935

Query: 484 SYSEKINEHCSQGRYKDALQIFEE 507
            Y   IN  C  G  K A  + EE
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEE 959



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 269/531 (50%), Gaps = 17/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  P   T N IL ++ K G+   V   L +M K+ + P+  T+NIL++  C  G  ++
Sbjct: 192 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 251

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  ++  M ++   P + TYN +++ +C  G  + A  L   M+S  +  DV TYN LI+
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               S R  + + L+ ++ +  I PN VT+N +I  +  EGK+  A +++  M   G SP
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 371

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VT+N LID +   GN +EA +M  +M  KGL  + ++   +L  LC   + D A    
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 431

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G  +  ++Y  +I G  ++   + A+ L +EM +  I P   TY+A+I G  + 
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + A +++  + + G+ P+   ++T+I+  C  G +++A++ +  M+ +    D  T 
Sbjct: 492 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 551

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+L++ LC+ G + +A +F R     G   ++V+++ LI+          AF +  EM +
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P  +TY ++   L + G L EA+KF   +       H V        P  +D  ++
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL-------HAV--------PAAVD--TV 654

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Y+  +   C  G    A+ +F E  Q+ I  +  TY +L++GL ++ K++
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/584 (23%), Positives = 242/584 (41%), Gaps = 91/584 (15%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D+ T+N ++ +L K GK+ E  + +  M   G++PN  +++ L++GY   G   +A  V 
Sbjct: 547  DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            D MT+    P  +TY  L+ G C  G L EA +  K + ++    D V YNTL+    +S
Sbjct: 607  DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666

Query: 129  GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-------------- 174
            G   +A  L  E+ +  I P++ T+  +I   C++GK   A    +              
Sbjct: 667  GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726

Query: 175  ----------------------NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                   M+  G +PD VT N +ID   + G +E+   ++  MG
Sbjct: 727  YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786

Query: 213  RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             +    N  T N +LH                                   GY + +  +
Sbjct: 787  NQNGGPNLTTYNILLH-----------------------------------GYSKRKDVS 811

Query: 273  RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             +  L+  +    I+P   T ++++ G+ +S   E  + +L   +  G+  D  TFN +I
Sbjct: 812  TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871

Query: 333  HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
               C+ G++  A      M       D  TC+ ++S L R    +++         +G +
Sbjct: 872  SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 931

Query: 393  VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA--- 449
             +S  Y  LI+ LC+   ++ AF +  EM   K+ P     +A+  AL + G+ +EA   
Sbjct: 932  PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 991

Query: 450  -------------QKFTSIMVETGKINHQVVQPNTSKTPEE---IDPSSISYSEKINEHC 493
                           FT++M    K N  V++    +       +    +SY+  I   C
Sbjct: 992  LRFMLKMKLVPTIASFTTLMHLCCK-NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050

Query: 494  SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            ++G    A +++EE +  G   N +TY  L+ GL+ R  + S A
Sbjct: 1051 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1094



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 157/358 (43%), Gaps = 36/358 (10%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G  PD VT N ++D   + GK+ +  DLL +M  Q   PN TTYNIL+ GY K   
Sbjct: 750  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  +  +   +  N  LPD  T + L+ G C + MLE   ++ K      +  D  T+N 
Sbjct: 810  VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI++   +G    AF L+  +   GI  +  T + M+    +  +  ++  ++  M + G
Sbjct: 870  LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAF-------------------RMMDVMGRKG------ 215
             SP+   Y  LI+  C+ G+++ AF                    M+  + + G      
Sbjct: 930  ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989

Query: 216  ------LKMNTI----TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
                  LKM  +    +  T++H  C    + EA  L    S  G  LD VSY  LITG 
Sbjct: 990  LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID-MLNELLQSGMI 322
                    A +L++EMK    + +  TY A+I GL          D +L +LL  G I
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107


>gi|15223266|ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08610
 gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9 [Arabidopsis thaliana]
 gi|332190196|gb|AEE28317.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 236/441 (53%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N IL  L   GKL +   L+  M +   VP+  + + LV G  ++  L +AM ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M  +  +PD  TYNM+I   C  G +  A  L ++M      PDV+TYNT+I   F+ 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G + +A +   +  ++G  P  +T+ ++++  C+     +A +++ +M   G  PD VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N+L++ NC+ GN+EE   ++  +   GL++NT+T NT+LH+LC  +  DE   +LN   +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
             Y    ++Y  LI G  +    +RA+  + +M E++ +P   TYN ++  +S+ G  + 
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AI++L  L  +   P   T+N++I G   +G ++KAL+ +++M++    PD +T   L+ 
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G CR  ++E+A +  +    +G  +   TY  +I  LCK++ +E A  ++  M      P
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522

Query: 429 DRYTYAAIHTALVESGRLEEA 449
           D   Y AI   + E G   EA
Sbjct: 523 DETIYTAIVKGVEEMGMGSEA 543



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 207/423 (48%), Gaps = 18/423 (4%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T N +++    +G+  +A KL++ +  H   P+  + + +++   +  ++DKA  I+R M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             +G  PD +TYN +I   CK G++  A  +++ M   G   + IT NT++  +      
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           ++A        + G     ++Y  L+    R   + RA+++ ++M      P   TYN++
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +    + G  E+   ++  +L  G+  +  T+NT++H  CS    ++  +  N M + S+
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P ++T NIL++GLC+  +L +A+ FF   + +    D VTYNT++ ++ KE  ++DA  
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL  ++     P   TY ++   L + G +++A +    M++ G                
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG---------------- 449

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
            I P  I+    I   C     ++A Q+ +ET  +G  I  STY  ++ GL K +K I  
Sbjct: 450 -IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCK-KKEIEM 507

Query: 537 AVD 539
           A++
Sbjct: 508 AIE 510



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 167/355 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +TYN I+  L KKG +     LL DM   G  P+  TYN ++      G  ++A
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R      QN   P + TY +L+   C       A  + ++M      PD+VTYN+L+N 
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY 288

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   E   +I  +  HG++ N VT+N ++   C     D+  +I+  M +  + P 
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI+  CKA  +  A      M  +    + +T NT+L  +  E  +D+A  LL 
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                      ++Y ++I G  +     +AL+L+ +M +  I P   T  ++I+G  ++ 
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             E+A  +L E    G     +T+  +I G C + ++E A++    M+    KPD
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 156/330 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +TYNT++  +F  G   +      D  + G  P   TY +LV   C+      A
Sbjct: 204 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARA 263

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V++ M      PD+ TYN L+N  C  G LEE   + + + S  L  + VTYNTL++ 
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                   E  ++++ + +    P  +T+NI+I   CK   + +A      M E    PD
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNT++ A  K G +++A  ++ ++         IT N+++  L  +  + +A  L +
Sbjct: 384 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYH 443

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G + D+++  +LI G+ R      A ++  E   R       TY  +I GL +  
Sbjct: 444 QMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKK 503

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + E AI+++  +L  G  PDET +  I+ G
Sbjct: 504 EIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 146/306 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TY  +++ + +        ++L DM  +G  P+  TYN LV+  C+ G L+E 
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+  +  +    +  TYN L++  C+    +E   +   M      P V+TYN LIN 
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++     A     ++ E    P+ VT+N ++    KEG +D A +++  ++     P 
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPG 418

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN++ID   K G M++A  +   M   G+  + IT  ++++  C    ++EA  +L 
Sbjct: 419 LITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLK 478

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S RG  +   +Y  +I G  + ++   A+++ + M      P    Y A++ G+ + G
Sbjct: 479 ETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538

Query: 305 KTEQAI 310
              +A+
Sbjct: 539 MGSEAV 544


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 266/524 (50%), Gaps = 19/524 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +N +L A+ K  K + V  L   M++  +V    TYNIL++ +C+   +  A+ 
Sbjct: 82  LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T + L+NG+C+   + +A  L  +M  +   PD +T+ TLI+  F
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  L+D + + G +PN VT+ +++   CK G  D A  ++  ME      D V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            +NT+ID+ CK  ++++A  +   M  KG++ N +T ++++  LC   +  +A  LL+  
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++    + V++  LI  + ++ K   A KL+D+M +R I P  FTYN+++ G     + 
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     PD  T+NT+I GFC   +VE   +   +M  +    D VT   L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL  +G  + A K F+  +  G   D +TY+ L+  LC   +LE A  +   M++ ++
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501

Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             D Y Y  +   + ++G++++    F S+ ++        V+PN            ++Y
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-------VKPNV-----------VTY 543

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I+  CS+   ++A  + ++ ++ G   N  TY  L+   ++
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 236/444 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT +++L+      ++++   L+  M + G  P+  T+  L+ G      
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M Q    P++ TY +++NG C  G  + A  L  +ME+ K+  DVV +NT
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E  
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT+N LIDA  K G   EA ++ D M ++ +  +  T N++++  C   +LD+A 
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + D V+Y TLI G+ + ++     +L+ EM  R ++  T TY  +I GL
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  + A  +  +++  G+ PD  T++ ++ G C+ G++EKAL+  + M +   K DI
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                ++ G+C+ G ++     F S  LKG   + VTYNT+IS LC +R L++A+ LL +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    P+  TY  +  A +  G
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDG 589



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 237/449 (52%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T+ T++  LF   K +E   L+  M ++G  PN  TY ++V+G CK G 
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ +++ M   K   DV  +N +I+  C    +++A  L KEME+  + P+VVTY++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A +L+ ++ E  I PN VT N +I  + KEGK  +A K+  +M +  
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+L++  C    +++A +M + M  K    + +T NT++   C  K++++  
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S RG   D V+Y TLI G F D   + A K++ +M    + P   TY+ ++ GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E+A+++ + + +S +  D   + T+I G C  G+V+        +  K  KP++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N ++SGLC + +L++A    +     G   +S TYNTLI +  ++     +  L+ E
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M   +   D  T   +   L   GRL+++
Sbjct: 601 MRSCRFVGDASTIGLVANML-HDGRLDKS 628



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 253/519 (48%), Gaps = 17/519 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  IL       KL++   L   M K   +P+   +N L+S   K+      + + + M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           + + +  ++TYN+LIN +C    +  A  L  +M  L   P +VT ++L+N +    R  
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L+D++ E G +P+ +T   +I       K  +A  +V  M + G  P+ VTY  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           +  CK G+ + A  +++ M    ++ + +  NTI+ +LC  + +D+A  L      +G  
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V+Y +LI+      + + A +L  +M E++I P+  T+NA+I    + GK  +A  +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            +++++  + PD  T+N++++GFC   +++KA Q    MV K   PD+VT N L+ G C+
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              +E   + FR    +G   D+VTY TLI  L  +   ++A  +  +M    + PD  T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y+ +   L  +G+LE+A +    M ++                 EI      Y+  I   
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKS-----------------EIKLDIYIYTTMIEGM 515

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           C  G+  D   +F     KG+  N  TY  +++GL  +R
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 233/472 (49%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++ LP +  +N L++        +    L ++M+ L+++  + TYN 
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  L+ ++ + G +P+ VT + ++  YC   +I  A  +V  M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD +T+ TLI          EA  ++D M ++G + N +T   +++ LC     D A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN         D V + T+I    +    + AL L+ EM+ + I P+  TY+++I  L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A  +L+++++  + P+  TFN +I  F  EG+  +A + ++ M+++S  PDI
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N L++G C    L+KA + F   + K    D VTYNTLI   CK +R+ED   L  E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L  D  TY  +   L   G  + AQK    MV  G                 + P
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-----------------VPP 468

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             ++YS  ++  C+ G+ + AL++F+  ++  I ++   Y  ++ G+ K  K
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 168/308 (54%), Gaps = 2/308 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N ++DA  K+GK  E   L  DM K+ + P+  TYN LV+G+C    L +A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      PDV TYN LI G+C +  +E+   L +EM    L+ D VTY TLI   F 
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A K+  ++   G+ P+ +T++I++   C  GK++KA ++   M+++    D   
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+I+  CKAG +++ + +   +  KG+K N +T NT++  LC ++ L EAY LL    
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   +  +Y TLI  + RD     + +L  EM+  + +    T   ++  +   G+ +
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 626

Query: 308 QA-IDMLN 314
           ++ +DML+
Sbjct: 627 KSFLDMLS 634



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 172/368 (46%), Gaps = 17/368 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D A  +   M ++   P  V +N L+ A  K    +    + + M R  +     T N
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C   ++  A  LL    K GY    V+  +L+ GY   ++ + A+ L D+M E 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P T T+  +I GL    K  +A+ +++ ++Q G  P+  T+  +++G C  G  + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L   NKM     + D+V  N ++  LC+   ++ AL  F+    KG   + VTY++LIS 
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M EKK+ P+  T+ A+  A V+ G+  EA+K    M++      
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK------ 358

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP   +Y+  +N  C   R   A Q+FE    K    +  TY  L+
Sbjct: 359 -----------RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407

Query: 525 NGLIKRRK 532
            G  K ++
Sbjct: 408 KGFCKSKR 415



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           + KLD+A  L     K       V +  L++   + +K +  + L ++M+  +I+   +T
Sbjct: 63  DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT 122

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I    +  +   A+ +L ++++ G  P   T +++++G+C   ++  A+   ++MV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           E  ++PD +T   L+ GL       +A+      + +G   + VTY  +++ LCK    +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  LL++ME  K+  D   +  I  +L +   +++A      M   G            
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG------------ 290

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P+ ++YS  I+  CS GR+ DA Q+  +  +K I  N  T+  L++  +K  K
Sbjct: 291 -----IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345

Query: 533 SI 534
            +
Sbjct: 346 FV 347


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 267/520 (51%), Gaps = 17/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+  ++  L  +G++ +  ++L +M  +G  P    Y++++   C+ G  + ++RV
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M       D    N+++N  C  G ++EA  L +++       D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +L+DE+      PN VT N +I + C+ G  ++  +++  M E+G +PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G++E A  +++ M   GLK N +  NT+L  LC  ++  EA  LL+   
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++   LD+V++  L+  + ++   +R ++L ++M     MP   TY  +I G  + G  +
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G CS G+   A +  ++M+++   P+ VT N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++E+A++  +  ++ G + D ++Y+T+I  L K  + E+A  LL+ M  K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+   Y++I  AL   GR+                 ++V+Q   +     I   ++ Y+ 
Sbjct: 529 PNTIIYSSIACALSREGRV-----------------NKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            I+  C +     A+  F      G   N+STY  L+ GL
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 222/418 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC  D V+YN +L  L    +  +V +L+ +M +    PN  T+N L+   C+ G  + 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              V+  M+++   PD+  Y  +I+G C  G LE A  +   M S  L P+VV YNT++ 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + R  EA +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M  +G  P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY T+I+  CK G ++EA  ++  M   G K NT++   +L  LC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   ++G   + V++ TLI    +     +A++L  +M      P   +Y+ +I GL ++
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GKTE+A+++LN ++  G+ P+   +++I      EG+V K +Q  + + + + + D V  
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           N ++S LC+    ++A+ FF   +  G   +  TY  LI  L  E   ++A  LLSE+
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 230/468 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  D    N +L+A+ ++G ++E   LL  +   G   +  +YN ++ G C    
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   ++D M +    P++ T+N LI   C  G+ E    +  +M      PD+  Y T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G    A ++++ +  +G+KPN V +N ++K  C   +  +A +++  M +  
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL S S  G   + VSY  ++ G     +   A +L  +M ++   P+  T+N +I  L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  EQAI++L ++L +G  PD  +++T+I G    G+ E+AL+  N MV K   P+ 
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  + +   L REG + K ++ F +        D+V YN +ISSLCK    + A    + 
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G  +EAQ+  S +   G +   +++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMR 639



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 246/508 (48%), Gaps = 17/508 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+ IL+A  + G       +L  M  +G   +    N++++  C+ G + EA
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +       D+ +YN ++ G C A    +   L  EM  +   P++VT+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G      +++ ++ EHG  P+   +  +I   CKEG ++ A +I+  M   G  P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V YNT++   C A   +EA  ++  M +K   ++ +T N ++   C    +D    LL 
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 380

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL  +G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A +++++++Q G  P+  TFNT+I+  C +G VE+A++   +M+     PD+++ +
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL + G  E+AL+     + KG + +++ Y+++  +L +E R+     +   +++ 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  D   Y A+ ++L +    + A  F + MV  G        PN S           +
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG------CMPNES-----------T 603

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKG 512
           Y+  I    S+G  K+A ++  E   +G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 250/529 (47%), Gaps = 21/529 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V YN ++    + G+L   R L + +    + PN  T+  +V G C  G + +A+ V+D 
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M+     P    Y++++   C +G    + R+ + M +     D    N ++N   E G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA  L+ +L   G + + V++N ++K  C   +     +++  M     +P+ VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C+ G  E    ++  M   G   +     TI+  +C E  L+ A  +LN     G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V Y T++ G    E+   A +L  EM ++       T+N ++    Q+G  ++ I
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++L ++L  G +PD  T+ T+I+GFC EG +++A+     M     KP+ V+  I+L GL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C  G    A +     I +G   + VT+NTLI+ LCK+  +E A  LL +M      PD 
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            +Y+ +   L ++G+ EEA +  ++MV  G                 I P++I YS    
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKG-----------------ISPNTIIYSSIAC 539

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
               +GR    +Q+F+  +   I  +   Y  +++ L KR ++  +A+D
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET-DRAID 587



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 197/416 (47%), Gaps = 20/416 (4%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VV YN ++  +  +G+   A +L   +    + PNA T   +++  C  G+I  A +++ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M   G +P    Y+ +++A C++G    + R+++ M  KG  ++T   N +L+ +C + 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            +DEA  LL   +  G   D VSY  ++ G    ++     +L DEM      P+  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I  L ++G  E+  ++L ++ + G  PD   + TII G C EG +E A +  N+M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KP++V  N +L GLC     ++A +       K   +D VT+N L+   C+   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL +M      PD  TY  +     + G ++EA      M   G       +PNT   
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNT--- 426

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                   +SY+  +   CS GR+ DA ++  +  Q+G   N  T+  L+N L K+
Sbjct: 427 --------VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 267/520 (51%), Gaps = 17/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+  ++  L  +G++ +  ++L +M  +G  P    Y++++   C+ G  + ++RV
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M       D    N+++N  C  G ++EA  L +++       D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +L+DE+      PN VT N +I + C+ G  ++  +++  M E+G +PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G++E A  +++ M   GLK N +  NT+L  LC  ++  EA  LL+   
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++   LD+V++  L+  + ++   +R ++L ++M     MP   TY  +I G  + G  +
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G CS G+   A +  ++M+++   P+ VT N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++E+A++  +  ++ G + D ++Y+T+I  L K  + E+A  LL+ M  K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+   Y++I  AL   GR+                 ++V+Q   +     I   ++ Y+ 
Sbjct: 529 PNTIIYSSIACALSREGRV-----------------NKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            I+  C +     A+  F      G   N+STY  L+ GL
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 222/418 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC  D V+YN +L  L    +  +V +L+ +M +    PN  T+N L+   C+ G  + 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              V+  M+++   PD+  Y  +I+G C  G LE A  +   M S  L P+VV YNT++ 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + R  EA +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M  +G  P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY T+I+  CK G ++EA  ++  M   G K NT++   +L  LC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   ++G   + V++ TLI    +     +A++L  +M      P   +Y+ +I GL ++
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GKTE+A+++LN ++  G+ P+   +++I      EG+V K +Q  + + + + + D V  
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           N ++S LC+    ++A+ FF   +  G   +  TY  LI  L  E   ++A  LLSE+
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 230/468 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  D    N +L+A+ ++G ++E   LL  +   G   +  +YN ++ G C    
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   ++D M +    P++ T+N LI   C  G+ E    +  +M      PD+  Y T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G    A ++++ +  +G+KPN V +N ++K  C   +  +A +++  M +  
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL S S  G   + VSY  ++ G     +   A +L  +M ++   P+  T+N +I  L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  EQAI++L ++L +G  PD  +++T+I G    G+ E+AL+  N MV K   P+ 
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  + +   L REG + K ++ F +        D+V YN +ISSLCK    + A    + 
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G  +EAQ+  S +   G +   +++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMR 639



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 246/508 (48%), Gaps = 17/508 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+ IL+A  + G       +L  M  +G   +    N++++  C+ G + EA
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +       D+ +YN ++ G C A    +   L  EM  +   P++VT+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G      +++ ++ EHG  P+   +  +I   CKEG ++ A +I+  M   G  P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V YNT++   C A   +EA  ++  M +K   ++ +T N ++   C    +D    LL 
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 380

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL  +G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A +++++++Q G  P+  TFNT+I+  C +G VE+A++   +M+     PD+++ +
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL + G  E+AL+     + KG + +++ Y+++  +L +E R+     +   +++ 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  D   Y A+ ++L +    + A  F + MV  G        PN S           +
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG------CMPNES-----------T 603

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKG 512
           Y+  I    S+G  K+A ++  E   +G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 250/529 (47%), Gaps = 21/529 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V YN ++    + G+L   R L + +    + PN  T+  +V G C  G + +A+ V+D 
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M+     P    Y++++   C +G    + R+ + M +     D    N ++N   E G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA  L+ +L   G + + V++N ++K  C   +     +++  M     +P+ VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C+ G  E    ++  M   G   +     TI+  +C E  L+ A  +LN     G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V Y T++ G    E+   A +L  EM ++       T+N ++    Q+G  ++ I
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++L ++L  G +PD  T+ T+I+GFC EG +++A+     M     KP+ V+  I+L GL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C  G    A +     I +G   + VT+NTLI+ LCK+  +E A  LL +M      PD 
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 496

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            +Y+ +   L ++G+ EEA +  ++MV  G                 I P++I YS    
Sbjct: 497 ISYSTVIDGLGKAGKTEEALELLNVMVNKG-----------------ISPNTIIYSSIAC 539

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
               +GR    +Q+F+  +   I  +   Y  +++ L KR ++  +A+D
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET-DRAID 587



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 197/416 (47%), Gaps = 20/416 (4%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VV YN ++  +  +G+   A +L   +    + PNA T   +++  C  G+I  A +++ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M   G +P    Y+ +++A C++G    + R+++ M  KG  ++T   N +L+ +C + 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            +DEA  LL   +  G   D VSY  ++ G    ++     +L DEM      P+  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I  L ++G  E+  ++L ++ + G  PD   + TII G C EG +E A +  N+M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KP++V  N +L GLC     ++A +       K   +D VT+N L+   C+   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL +M      PD  TY  +     + G ++EA      M   G       +PNT   
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNT--- 426

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                   +SY+  +   CS GR+ DA ++  +  Q+G   N  T+  L+N L K+
Sbjct: 427 --------VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 161/603 (26%), Positives = 275/603 (45%), Gaps = 90/603 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  V+YNT++  L    K++E     + M   G  P+   +  L+ G+CK G  +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE--------------------------- 97
            ++++     +  PDV+ Y  +I+G+C AG L+                           
Sbjct: 62  HKLLN-QALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 98  -----EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                EA  L +E+++    P+VV Y  +I+   ++GR  +  K  +E+      P   T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           + ++I   CK   +  ACK+   M + G  PD +TY TLID   KA  M+EA +++DVM 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 213 RKGLKMNTITLNTILHTLC-------------------CEKKL----------------D 237
            KG +   +T  +I+H  C                   CE  L                +
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EAY +L   + RG   D + Y +LI   F   +   A  ++D M E+   P   TY  +I
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
              S+ G  E A ++L  + +SG+ PD   +N+++ G+    +V++A   +++MV    K
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIK 420

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS-VTYNTLISSLCKERRLEDAFG 416
           P+ VT N+L+ GL ++G  ++A   F+  + K +   + V+Y  LI  L K  R+ +AF 
Sbjct: 421 PNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFL 480

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
              EM ++ + P+ +TY ++  +L ++GR+ EA+K    MV+ G                
Sbjct: 481 QFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG---------------- 524

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
            ++P   +YS  I           A  +F+E  ++G A N+ TY  L  G     ++  +
Sbjct: 525 -VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF----RAAGR 579

Query: 537 AVD 539
           A+D
Sbjct: 580 ALD 582



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 259/493 (52%), Gaps = 11/493 (2%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D ++Y T++  L    +++E  +L  ++K  G  PN   Y  ++ G  K G +++ ++  
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 166

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M+ +  +P   TY ++I+G C A ML +A ++ ++M     +PD +TY TLI+ F ++
Sbjct: 167 EEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 226

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +  EA KL+D +   G +P AVT+  ++  +CK   I++A +++  M E G  P    +
Sbjct: 227 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 286

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            +L+      G  EEA++++  M  +G   + I   +++  L    ++ EA  + +S  +
Sbjct: 287 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 346

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D ++YGT+I  + +      A ++ + M +  + P  F YN+++ G  +  + +Q
Sbjct: 347 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 406

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILL 367
           A  + + ++ SG+ P+  TFN ++HG   +G+ ++A     +M+EK    P +V+  IL+
Sbjct: 407 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL + G + +A   F+  I +G   +  TY +LI SL K  R+ +A  L+ +M +  + 
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPEEIDPSSI 483
           PD   Y+A+ T L++S  ++ A      M++ G    ++ ++V++         +D    
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD---- 582

Query: 484 SYSEKINEHCSQG 496
              E + +H SQG
Sbjct: 583 --LEAVKQHFSQG 593



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 211/402 (52%), Gaps = 1/402 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G  C+P   TY  ++D L K   L +   +   M ++G VP+  TY  L+ G+ K   
Sbjct: 169 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 228

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +++D+M      P   TY  +++G+C   M+ EA  +  +M      P +  + +
Sbjct: 229 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 288

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +   GR+ EA++++ E+   G  P+ + +  +I      G++ +A  +  +M E G
Sbjct: 289 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 348

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD +TY T+I    K GN+E A  ++++M + G+  +    N+++      +++D+A+
Sbjct: 349 CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 408

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF-TYNAMIWG 299
            + +     G   + V++  L+ G F+D K +RA  L+ EM E++ +P T  +Y  +I G
Sbjct: 409 GVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDG 468

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+  +A     E++  G+IP+  T+ ++I+     G++ +A +    MV+    PD
Sbjct: 469 LGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 528

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           +   + L++GL    +++ A   F+  + +G A + VTY  L
Sbjct: 529 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 261/523 (49%), Gaps = 17/523 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V++NTI+    K G ++  +     M K GL+P+  +YNIL+ G C  G + EA+ +
Sbjct: 279 PSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M  +   PD+ TYN+L  G+   G++  A+ + ++M      P++VTY  LI    +
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL  E+  HG + + ++  +++   CK  ++D A K+   ME NG  PD +T
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+TLI   CK G +++A  + + M    +  N++    IL  LC + K+ +A M  +   
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                LD + Y  +I GY +      A+KL+ ++ E+ I P+  T+N++++G   + K  
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA  +L+ +   G+ P+  T+ T+++ +C EG ++  L+  ++M  K+  P  +T  +++
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC++  L+++ +        G   D V+YNT+I + CK R +  AF L  +M    L 
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P   TY  +       G L++A                      S    +++ +  +Y+ 
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLL-----------------VSLQNRKVNLNKYAYTT 741

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I  HC++G    A+  F +  +KG  ++   Y  ++  L KR
Sbjct: 742 IIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKR 784



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 241/491 (49%), Gaps = 35/491 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD  +YN ++  L   G + E  DL +DM+  GL P+  TYNIL  G+  LG +  A
Sbjct: 311 GLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGA 370

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
             ++  M      P++ TY +LI G C  G +EEA +L KEM                  
Sbjct: 371 WNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGS 430

Query: 107 -----------------ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                            E+  L PD++TY+TLI+   + G   +A  L +++  + I PN
Sbjct: 431 LCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPN 490

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           ++ H  ++   C++GKI +A      +  +  S D + YN +ID   K GN  EA ++  
Sbjct: 491 SLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYK 550

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            +G KG+    +T N++++  C  +KL +A  LL++    G   + V+Y TL+  Y  + 
Sbjct: 551 QLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEG 610

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
                L+L  EMK + I P+  TY  +I GL +  K +++  +L ++   G+ PD+ ++N
Sbjct: 611 NMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYN 670

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           TII  FC    + KA Q ++KM+  + +P  VT NIL++G C  G L+ A     S   +
Sbjct: 671 TIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNR 730

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
              ++   Y T+I + C +  ++ A     +M EK        Y+A+   L +   + EA
Sbjct: 731 KVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEA 790

Query: 450 QKFTSIMVETG 460
           + F  +M+  G
Sbjct: 791 KYFFCMMLSDG 801



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 265/533 (49%), Gaps = 21/533 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN++L  L      N + D+ +++K  G   +  T +I+V G C+    ++A+      
Sbjct: 216 TYNSLLYNLRHS---NIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDT 272

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
              +  P V ++N +++ +C  G ++ A      M    LLPD  +YN LI+    +G  
Sbjct: 273 EGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSM 332

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L ++++ HG++P+ VT+NI+ K +   G I+ A  I++ M   G +P+ VTY  L
Sbjct: 333 GEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVL 392

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I  +C+ GN+EEA ++   M   G +++ I+   +L +LC  +++D A+ L       G 
Sbjct: 393 ICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGL 452

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y TLI G  +  +  +A+ L+++M   +I+P++  + A++ GL + GK  QA  
Sbjct: 453 RPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARM 512

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
             + L+ S +  D   +N +I G+   G   +A++ + ++ EK   P IVT N L+ G C
Sbjct: 513 YFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFC 572

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
               L +A +   +  L G   ++VTY TL++  C+E  ++    LLSEM+ K +GP   
Sbjct: 573 INRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHI 632

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV------------------VQPNTSK 473
           TY  +   L +  +L+E+ +    M   G    QV                   Q     
Sbjct: 633 TYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKM 692

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
               ++P+S++Y+  IN  C  G  KDA  +    + + + +NK  Y  ++  
Sbjct: 693 LLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKA 745



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 214/411 (52%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           ++   +L +L K  +++    L  +M+  GL P+  TY+ L+ G CK G +++A+ + + 
Sbjct: 422 ISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEK 481

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M  N+ +P+   +  ++ G C  G + +A      + +  L  D++ YN +I+ + + G 
Sbjct: 482 MCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGN 541

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           + EA KL  +L E GI P  VT N ++  +C   K+ +A +++  ++ +G  P+ VTY T
Sbjct: 542 TREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTT 601

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L++  C+ GNM+    ++  M  K +    IT   ++  LC + KL E+  LL      G
Sbjct: 602 LMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVG 661

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D+VSY T+I  + +     +A +L+D+M    + P++ TYN +I G    G  + A 
Sbjct: 662 LTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDAD 721

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++L  L    +  ++  + TII   C++G V+KA+ +  +MVEK F+  I   + ++  L
Sbjct: 722 NLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRL 781

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           C+  ++ +A  FF   +  G   D   +  L+++  +   L   F LL+EM
Sbjct: 782 CKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 184/350 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+++ +  IL  L +KGK+++ R     +    L  +   YNI++ GY K G  +EA++
Sbjct: 488 IPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVK 547

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   + +    P + T+N L+ G+C    L +A RL   ++   L P+ VTY TL+N + 
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           E G      +L+ E+    I P  +T+ ++IK  CK+ K+ ++C+++ +M+  G +PD V
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +YNT+I A CKA +M +AF++ D M    L+  ++T N +++  C    L +A  LL S 
Sbjct: 668 SYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSL 727

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             R   L++ +Y T+I  +      ++A+  + +M E+    S   Y+A+I  L +    
Sbjct: 728 QNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLV 787

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            +A      +L  G+ PD+  F  +++ F   G +    +   +M++  +
Sbjct: 788 TEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/472 (22%), Positives = 209/472 (44%), Gaps = 25/472 (5%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           VW  +ML   +  + M+ +A  +  +M+ L  +  + TYN+L+     S    + +   +
Sbjct: 181 VW--DMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVY---N 235

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           E+   G   +  T +I++   C++ +   A    ++ E   F P  V++NT++   CK G
Sbjct: 236 EIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLG 295

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A     +M + GL  +  + N ++H LC    + EA  L N     G   D V+Y 
Sbjct: 296 FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            L  G+      N A  +  +M  +   P+  TY  +I G  Q G  E+A+ +  E++  
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G      +   ++   C   QV+ A +   +M     +PD++T + L+ GLC++G +++A
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
           +  +          +S+ +  ++  LC++ ++  A      +    L  D   Y  +   
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----------SKTPEEID--------P 480
            ++ G   EA K    + E G I+  +V  N+           S+    +D        P
Sbjct: 536 YIKRGNTREAVKLYKQLGEKG-ISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEP 594

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++++Y+  +N +C +G  +  L++  E + K I     TY  ++ GL K+ K
Sbjct: 595 NAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWK 646



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 38/336 (11%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNS------------------ASKRGYYLDEV 256
           G + +  +   + H L  +K+L+E  ++L+                    S R +    V
Sbjct: 121 GFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNV 180

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            +  L   Y R    + AL +  +MK+   + S  TYN++++ L  S       D+ NE+
Sbjct: 181 VWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMW---DVYNEI 237

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
             SG    E T + ++ G C + + + A+ F      K F+P +V+ N ++S  C+ G +
Sbjct: 238 KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFV 297

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A  FF   +  G   D+ +YN LI  LC    + +A  L ++ME   L PD  TY  +
Sbjct: 298 DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL 357

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                       A+ F  + +  G  N  ++Q    K P   +P+ ++Y+  I  HC  G
Sbjct: 358 ------------AKGFRLLGLINGAWN--IIQKMLIKGP---NPNLVTYTVLICGHCQIG 400

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             ++AL++++E    G  ++  +   L+  L K R+
Sbjct: 401 NVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ 436



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 83/181 (45%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD V+YNTI+ A  K   + +   L   M    L P   TYNIL++G+C  G 
Sbjct: 657 MDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGD 716

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+A  ++  +   K   + + Y  +I   C  G +++A    ++M        +  Y+ 
Sbjct: 717 LKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSA 776

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I R  +     EA      +   G+ P+     +++  + + G ++   +++  M ++G
Sbjct: 777 VIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836

Query: 181 F 181
           +
Sbjct: 837 W 837


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 237/444 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT +++L+      ++++   L+  M + G  P+  T+  L+ G      
Sbjct: 70  MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M Q    P++ TY +++NG C  G ++ AF L  +ME+ K+  DVV +NT
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E  
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT+N LIDA  K G   EA ++ D M ++ +  +  T N++++  C   +LD+A 
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + D  +Y TLI G+ + ++     +L+ EM  R ++  T TY  +I GL
Sbjct: 310 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  + A  +  +++  G+ PD  T++ ++ G C+ G++EKAL+  + M +   K DI
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                ++ G+C+ G ++     F S  LKG   + VTYNT+IS LC +R L++A+ LL +
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M+E    PD  TY  +  A +  G
Sbjct: 490 MKEDGPLPDSGTYNTLIRAHLRDG 513



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 236/449 (52%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T+ T++  LF   K +E   L+  M ++G  PN  TY ++V+G CK G 
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 164

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  +++ M   K   DV  +N +I+  C    +++A  L KEME+  + P+VVTY++
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 224

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A +L+ ++ E  I PN VT N +I  + KEGK  +A K+  +M +  
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+LI+  C    +++A +M + M  K    +  T NT++   C  K++++  
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S RG   D V+Y TLI G F D   + A K++ +M    + P   TY+ ++ GL
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E+A+++ + + +S +  D   + T+I G C  G+V+        +  K  KP++
Sbjct: 405 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 464

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N ++SGLC + +L++A    +     G   DS TYNTLI +  ++     +  L+ E
Sbjct: 465 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 524

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M   +   D  T   +   L   GRL+++
Sbjct: 525 MRSCRFVGDASTIGLVANML-HDGRLDKS 552



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 251/510 (49%), Gaps = 25/510 (4%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL-----PD 79
           KL++   L   M K   +P+   +N L+S   K+   K+   V+ L    K +     P 
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM---KKFDLVISLALLGKMMKLGYEPS 78

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           + T + L+NG+C+   + +A  L  +M  +   PD +T+ TLI+  F   ++ EA  L+D
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
            + + G +PN VT+ +++   CK G ID A  ++  ME      D V +NT+ID+ CK  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           ++++A  +   M  KG++ N +T ++++  LC   +  +A  LL+   ++    + V++ 
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI  + ++ K   A KL D+M +R I P  FTYN++I G     + ++A  M   ++  
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
              PD  T+NT+I GFC   +VE   +   +M  +    D VT   L+ GL  +G  + A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K F+  +  G   D +TY+ L+  LC   +LE A  +   M++ ++  D Y Y  +   
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           + ++G++++       +   G      V+PN            ++Y+  I+  CS+   +
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKG------VKPNV-----------VTYNTMISGLCSKRLLQ 481

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +A  + ++ ++ G   +  TY  L+   ++
Sbjct: 482 EAYALLKKMKEDGPLPDSGTYNTLIRAHLR 511



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 217/445 (48%), Gaps = 19/445 (4%)

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS--MEAFKLIDELDEHGIK 147
           W     L++A  L   M   + LP +  +N L++   +  +   + +  L+ ++ + G +
Sbjct: 17  WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE 76

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+ VT + ++  YC   +I  A  +V  M E G+ PD +T+ TLI          EA  +
Sbjct: 77  PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +D M ++G + N +T   +++ LC    +D A+ LLN         D V + T+I    +
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
               + AL L+ EM+ + I P+  TY+++I  L   G+   A  +L+++++  + P+  T
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           FN +I  F  EG+  +A + H+ M+++S  PDI T N L++G C    L+KA + F   +
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            K    D  TYNTLI   CK +R+ED   L  EM  + L  D  TY  +   L   G  +
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            AQK    MV  G                 + P  ++YS  ++  C+ G+ + AL++F+ 
Sbjct: 377 NAQKVFKQMVSDG-----------------VPPDIMTYSILLDGLCNNGKLEKALEVFDY 419

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
            ++  I ++   Y  ++ G+ K  K
Sbjct: 420 MQKSEIKLDIYIYTTMIEGMCKAGK 444



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 168/308 (54%), Gaps = 2/308 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N ++DA  K+GK  E   L  DM K+ + P+  TYN L++G+C    L +A ++
Sbjct: 252 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 311

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      PD+ TYN LI G+C +  +E+   L +EM    L+ D VTY TLI   F 
Sbjct: 312 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 371

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A K+  ++   G+ P+ +T++I++   C  GK++KA ++   M+++    D   
Sbjct: 372 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 431

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+I+  CKAG +++ + +   +  KG+K N +T NT++  LC ++ L EAY LL    
Sbjct: 432 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D  +Y TLI  + RD     + +L  EM+  + +    T   ++  +   G+ +
Sbjct: 492 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 550

Query: 308 QA-IDMLN 314
           ++ +DML+
Sbjct: 551 KSFLDMLS 558



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 133/270 (49%), Gaps = 19/270 (7%)

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM--LNELLQSGMIPD 324
           +D K + A+ L+  M + + +PS F +N ++  +++  K +  I +  L ++++ G  P 
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T +++++G+C   ++  A+   ++MVE  ++PD +T   L+ GL       +A+    
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + +G   + VTY  +++ LCK   ++ AF LL++ME  K+  D   +  I  +L +  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
            +++A      M   G                 I P+ ++YS  I+  CS GR+ DA Q+
Sbjct: 199 HVDDALNLFKEMETKG-----------------IRPNVVTYSSLISCLCSYGRWSDASQL 241

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             +  +K I  N  T+  L++  +K  K +
Sbjct: 242 LSDMIEKKINPNLVTFNALIDAFVKEGKFV 271


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 271/582 (46%), Gaps = 61/582 (10%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           F  LP   T N ++DAL +         +   M    ++P+  + + L+  +      + 
Sbjct: 68  FNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQL 127

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              VV L+ +     +V+  N+++ G C  G + EA  L +EM    + PD+V+YNTLIN
Sbjct: 128 GFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLIN 187

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++ +  EA  L+ E++  G  PN+VT   ++   CK+G++D+A +++  M++ GF  
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA 247

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V Y TLI   C  GN++    + D M  KG+  N +T + ++H LC   +  EA  +L
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N+ ++ G + D V+Y  LI G  +D +A  A+ L + M E+   PS  TYN ++ GL + 
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 367

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV--EKSFKPDIV 361
           G    A  +L  +++ G   D  T+NT++ G C +G+V++AL+  N M   E   +P++ 
Sbjct: 368 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 427

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN---------------------- 399
           T N+L+ GLC+EG L KA+K  R  + KG   + VTYN                      
Sbjct: 428 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 487

Query: 400 -------------TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
                         LI   CK R L  A GL  EM    L P  + Y  +  +L + G L
Sbjct: 488 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 547

Query: 447 EEAQKFTSIMVETGKIN--------------------HQVVQPNTSKTPE-EIDPSSISY 485
           E+A+   S+  E G  N                     Q V+    K  E  + P ++++
Sbjct: 548 EQAK---SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 604

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           S  IN     G   +A    E     G   +   Y +L+ GL
Sbjct: 605 STLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 646



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 241/457 (52%), Gaps = 19/457 (4%)

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
           LP   T N L++    +     AF + + M  + +LP   + + LI  F ++ +    F 
Sbjct: 71  LPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFG 130

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           ++  + + G   N    NI++K  C+ G + +A  ++R M     SPD V+YNTLI+  C
Sbjct: 131 VVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLC 190

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           KA  ++EA  ++  M   G   N++T  T++  LC + ++DEA  LL +  K+G+  D V
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVV 250

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            YGTLI+G+  +   +R  +L+DEM  + I  +  TY+ ++ GL + G+ ++A  +LN +
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            + G+ PD  T+  +I G C +G+   A+   N MVEK  +P  VT N+LLSGLC+EG++
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYA 434
             A K  R  I KGK  D VTYNTL+  LC + ++++A  L + M   E  L P+ +T+ 
Sbjct: 371 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 430

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   L + GRL +A K    MV+ G   + V                 +Y+  +     
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV-----------------TYNMLLGGCLK 473

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            G+ K+A++++++    G   N  TY  L++G  K R
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMR 510



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 233/464 (50%), Gaps = 2/464 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P++VT  T++D L K G+++E  +LL  MKK+G   +   Y  L+SG+C  G 
Sbjct: 205 MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 264

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L     + D M       +V TY+ L++G C  G  +EA  +   M    + PDVVTY  
Sbjct: 265 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 324

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR+  A  L++ + E G +P+ VT+N+++   CKEG +  A KI+R M E G
Sbjct: 325 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDE 238
              D VTYNTL+   C  G ++EA ++ + M      L+ N  T N ++  LC E +L +
Sbjct: 385 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 444

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +     K+G   + V+Y  L+ G  +  K   A++LW ++ +   +P++FTY+ +I 
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  +      A  +  E+   G+ P    +NT++   C EG +E+A     +M   + +P
Sbjct: 505 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 564

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI++ N ++ G  + G  +   +     +  G   D++T++TLI+ L K   L++A   L
Sbjct: 565 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             M      PD   Y ++   L   G   E       M   G +
Sbjct: 625 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 215/445 (48%), Gaps = 37/445 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   + VTY+ ++  L + G+  E   +L+ M + G+ P+  TY  L+ G CK G 
Sbjct: 275 MLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGR 334

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              AM +++LM +    P   TYN+L++G C  G++ +AF++ + M       DVVTYNT
Sbjct: 335 ATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 394

Query: 121 LINRFFESGRSMEAFKLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           L+    + G+  EA KL + +  +E+ ++PN  T N++I   CKEG++ KA KI R M +
Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 454

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G   + VTYN L+    KAG ++EA  +                         ++ LD 
Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMELW------------------------KQVLD- 489

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                      G+  +  +Y  LI G+ +    N A  L+ EM+   + P+ F YN ++ 
Sbjct: 490 ----------LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMA 539

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G  EQA  +  E+  +   PD  +FNT+I G    G  +   +   KMVE   +P
Sbjct: 540 SLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRP 599

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D +T + L++ L + G L++A       +  G   D++ Y++L+  L  +    +   LL
Sbjct: 600 DALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLL 659

Query: 419 SEMEEKKLGPDRYTYAAIHTALVES 443
            +M  K    DR   + I T L  S
Sbjct: 660 HQMAAKGTVLDRKIVSTILTCLCHS 684



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 208/435 (47%), Gaps = 15/435 (3%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           EA  L        LLP   T N L++    S     AF +   +    + P+  + + +I
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           + +    K      +V  + + GF+ +    N ++   C+ G + EA  ++  MGRK + 
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            + ++ NT+++ LC  KKL EA  LL      G + + V+  TL+ G  +D + + A++L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            + MK++        Y  +I G   +G  ++  ++ +E+L  G+  +  T++ ++HG C 
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            GQ ++A    N M E    PD+VT   L+ GLC++G    A+      + KG+   +VT
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN L+S LCKE  + DAF +L  M EK    D  TY  +   L + G+++EA K  + M 
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           +    N   ++PN             +++  I   C +GR   A++I  +  +KG   N 
Sbjct: 417 D----NENCLEPNV-----------FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 461

Query: 518 STYMNLMNGLIKRRK 532
            TY  L+ G +K  K
Sbjct: 462 VTYNMLLGGCLKAGK 476



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 191/404 (47%), Gaps = 37/404 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY  ++D L K G+     DLL+ M ++G  P+  TYN+L+SG CK G 
Sbjct: 310 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 369

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK--LLPDVVTY 118
           + +A +++ +M +     DV TYN L+ G C+ G ++EA +L   M   +  L P+V T+
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI    + GR  +A K+  ++ + G   N VT+N+++    K GKI +A ++ + + +
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            GF P+  TY+ LID  CK   +  A  +   M   GL       NT++ +LC E  L++
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 549

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFR--------------------------DEKAN 272
           A  L           D +S+ T+I G  +                              N
Sbjct: 550 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 609

Query: 273 RALKL--WDEMK---ERQIM----PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           R  KL   DE K   ER +     P    Y++++ GLS  G T + I++L+++   G + 
Sbjct: 610 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 669

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           D    +TI+   C   Q    ++      + + +   ++CN LL
Sbjct: 670 DRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 713


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 267/515 (51%), Gaps = 25/515 (4%)

Query: 9   DNVTYNTILDALFKKG--KLNEVRDLLSDMKKQG---LVPNRTTYNILVSGYCKLGWLKE 63
           D V+YNT+L AL ++G   L + R LL DM ++      PN  +Y  ++ G C      E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ ++  M  +    DV TY  LI G C+A  L+ A  L  EM    + P+VV Y+ L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +  SGR  +  K+ +++   GIKP+ +    +I   CKEGK  KA K+   M + G  P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN LI++ CK G++ EA  +   M  KG+  + +T NT++  L    ++DEA   L
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 244 NSASKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
               +    +  D V++ ++I G  +  +  +A+K+ + M ER  M +  TYN +I G  
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +  K + A+++++EL  SG+ PD  T++ +I+GF    +V++A +F   M ++  K ++ 
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
               LL+ +C++G++E+A+  F + + K   +D++ Y+T+I   CK   ++    L+ +M
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLF-NEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++ L PD  TY+ +     + G LEEA++    M  +G +                 P 
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFV-----------------PD 543

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
              +   I  + ++G+    L++  E R K +A +
Sbjct: 544 VAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFD 578



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 235/447 (52%), Gaps = 3/447 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V+Y T++  L    +  E   LL  M+  G+  +  TY  L+ G C    L  A+ +
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M  +   P+V  Y+ L+ G+C +G  ++  ++ ++M    + PDV+ +  LI+   +
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G++ +A K+ D + + G++PN VT+N++I   CKEG + +A  + + M++ G +PD VT
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300

Query: 188 YNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           YNTLI        M+EA   ++ M  G   ++ + +T N+++H LC   ++ +A  +   
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREM 360

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++RG   + V+Y  LI G+ R  K   A+ L DE+    + P +FTY+ +I G S+  +
Sbjct: 361 MAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWE 420

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A   L  + Q G+  +   +  ++   C +G +E+A+   N+M +K+   D +  + 
Sbjct: 421 VDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYST 479

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ G C+ G ++   +  +  + +G A D+VTY+ LI+   K   LE+A  +L +M    
Sbjct: 480 MIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASG 539

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKF 452
             PD   + ++       G+ ++  K 
Sbjct: 540 FVPDVAVFDSLIKGYSAEGQTDKVLKL 566



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 216/431 (50%), Gaps = 3/431 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VTY T++  L    +L+   +LL +M   G+ PN   Y+ L+ GYC+ G 
Sbjct: 149 MQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGR 208

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++  +V + M++    PDV  +  LI+  C  G   +A +++  M    L P+VVTYN 
Sbjct: 209 WQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNV 268

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G   EA  L  E+D+ G+ P+ VT+N +I       ++D+A   +  M +  
Sbjct: 269 LINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGD 328

Query: 181 --FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD VT+N++I   CK G M +A ++ ++M  +G   N +T N ++       K+  
Sbjct: 329 TVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKM 388

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L++  +  G   D  +Y  LI G+ +  + +RA K    M++R I    F Y  ++ 
Sbjct: 389 AMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLA 448

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            + Q G  E+A+ + NE+ ++  + D   ++T+IHG C  G ++   Q    M+++   P
Sbjct: 449 AMCQQGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAP 507

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT ++L++   + G LE+A +  +     G   D   +++LI     E + +    L+
Sbjct: 508 DAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLI 567

Query: 419 SEMEEKKLGPD 429
            EM  K +  D
Sbjct: 568 HEMRAKNVAFD 578



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 214/444 (48%), Gaps = 27/444 (6%)

Query: 109 LKLLPDV---VTYNTLINRFFESGRS--MEAFKLIDELDEHG---IKPNAVTHNIMIKWY 160
           L  LPDV   V+YNT++      G     +A  L+ ++        +PNAV++  +++  
Sbjct: 74  LSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGL 133

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           C   +  +A  ++R+M+ +G   D VTY TLI   C A  ++ A  ++D M   G++ N 
Sbjct: 134 CASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNV 193

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +  + +L   C   +  +   +    S+RG   D + +  LI    ++ K  +A K+ D 
Sbjct: 194 VVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDM 253

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M +R + P+  TYN +I  L + G   +A+ +  E+   G+ PD  T+NT+I G     +
Sbjct: 254 MVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLE 313

Query: 341 VEKALQFHNKMVEKS--FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           +++A+ F  +M++     +PD+VT N ++ GLC+ G + +A+K       +G   + VTY
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           N LI    +  +++ A  L+ E+    L PD +TY+ +     +   ++ A+KF   M +
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 459 TG-------------KINHQVVQPNTSKTPEEIDPS----SISYSEKINEHCSQGRYKDA 501
            G              +  Q +         E+D +    +I+YS  I+  C  G  K  
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTV 493

Query: 502 LQIFEETRQKGIAINKSTYMNLMN 525
            Q+ ++   +G+A +  TY  L+N
Sbjct: 494 KQLIQDMLDEGLAPDAVTYSMLIN 517



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 186/375 (49%), Gaps = 27/375 (7%)

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG--NMEEAFRMMDVMGRKG---L 216
           +   + +AC ++  + +     D V+YNT++ A C+ G  ++ +A  ++  M R+     
Sbjct: 63  RGAPVTEACSLLSALPD---VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAA 119

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + N ++  T++  LC  ++  EA  LL S    G   D V+YGTLI G     + + AL+
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L DEM    + P+   Y+ ++ G  +SG+ +    +  ++ + G+ PD   F  +I   C
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
            EG+  KA +  + MV++  +P++VT N+L++ LC+EG + +AL   +    KG A D V
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299

Query: 397 TYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           TYNTLI+ L     +++A   L EM   +  + PD  T+ ++   L + GR+ +A K   
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           +M E G + + V                 +Y+  I       + K A+ + +E    G+ 
Sbjct: 360 MMAERGCMCNLV-----------------TYNYLIGGFLRVHKVKMAMNLMDELAISGLE 402

Query: 515 INKSTYMNLMNGLIK 529
            +  TY  L+NG  K
Sbjct: 403 PDSFTYSILINGFSK 417



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 129/256 (50%), Gaps = 36/256 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT+N+++  L K G++ +   +   M ++G + N  TYN L+ G+ ++  +K AM +
Sbjct: 333 PDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNL 392

Query: 68  VDLMTQNKSLPDVWTYNMLINGW-----------------------------------CN 92
           +D +  +   PD +TY++LING+                                   C 
Sbjct: 393 MDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQ 452

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            GM+E A  L  EM+    L D + Y+T+I+   +SG      +LI ++ + G+ P+AVT
Sbjct: 453 QGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVT 511

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           ++++I  Y K G +++A ++++ M  +GF PD   +++LI      G  ++  +++  M 
Sbjct: 512 YSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMR 571

Query: 213 RKGLKMNTITLNTILH 228
            K +  +   ++TI+ 
Sbjct: 572 AKNVAFDPKIISTIIR 587



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 67/117 (57%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D + Y+T++    K G +  V+ L+ DM  +GL P+  TY++L++ Y KLG L+EA 
Sbjct: 470 CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAE 529

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           RV+  MT +  +PDV  ++ LI G+   G  ++  +L  EM +  +  D    +T+I
Sbjct: 530 RVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 26/182 (14%)

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWIL-------KGKAVDSVTYNTLISSLCKERRL 411
           D V+ N +L+ LCR G     L+  RS ++            ++V+Y T++  LC  RR 
Sbjct: 82  DAVSYNTVLAALCRRG--GDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRT 139

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
            +A  LL  M+   +  D  TY  +   L ++  L+ A +    M  +G      VQPN 
Sbjct: 140 GEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSG------VQPNV 193

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                      + YS  +  +C  GR++D  ++FE+  ++GI  +   +  L++ L K  
Sbjct: 194 -----------VVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEG 242

Query: 532 KS 533
           K+
Sbjct: 243 KT 244


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 268/522 (51%), Gaps = 20/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++  L  +G++ +   LL DM ++G  PN  TY +L+   CK    ++AM V
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      P++ TYN++ING C  G +++A  L   + S    PD V+Y TL+     
Sbjct: 200 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCA 259

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S R  +  +L  E+ E    PN VT +++I+++C+ G +++A ++++ M E+  + +   
Sbjct: 260 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTL 319

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            N +I++ CK G +++AF+ ++ MG  G   +TI+  T+L  LC  ++ ++A  LL    
Sbjct: 320 CNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMV 379

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     +EV++ T I    +     +A+ L ++M+E        TYNA++ G    G  +
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++   +      P+  T+ T++ G C+  +++ A +   +M+ +   P++VT N+L+
Sbjct: 440 SALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLV 496

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +  C++G L++A++     +  G   + +TYNTL   + K+   EDA  LL  +  K + 
Sbjct: 497 NFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVS 556

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  T+++I   L +  R+EEA +   +  + G                 + P ++ Y++
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG-----------------MRPKALVYNK 599

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +   C +    +A+         G   N+STY+ L+ GL +
Sbjct: 600 ILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAR 641



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 260/538 (48%), Gaps = 24/538 (4%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG G   D   YNT++    + G L+  R L+  M    + P+  TY  L+   C  G +
Sbjct: 102 EGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRV 158

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A+ ++D M +    P+V TY +L+   C     E+A  +  EM +    P++VTYN +
Sbjct: 159 ADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVI 218

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN     GR  +A  L++ L  +G +P+ V++  ++K  C   + D   ++   M E   
Sbjct: 219 INGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 278

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VT++ LI   C+ G +E A +++  M       NT   N +++++C + ++D+A+ 
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFK 338

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            LN+    G   D +SY T++ G  R E+ N A +L  EM      P+  T+N  I  L 
Sbjct: 339 FLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILC 398

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           Q G  EQAI ++ ++ + G      T+N +++GFC +G ++ AL+    M     KP+ +
Sbjct: 399 QKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTI 455

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T   LL+GLC    L+ A +     + +    + VT+N L++  C++  L++A  L+ +M
Sbjct: 456 TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQM 515

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E    P+  TY  +   + +    E+A +    +V  G                 + P 
Sbjct: 516 MEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG-----------------VSPD 558

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            I++S  I     + R ++A+Q+F   +  G+      Y  ++ GL KR + I  A+D
Sbjct: 559 VITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHE-IDNAID 615



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 244/468 (52%), Gaps = 3/468 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN I++ + ++G++++ RDLL+ +   G  P+  +Y  L+ G C    
Sbjct: 203 MRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKR 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   +   M +   +P+  T++MLI  +C  GM+E A ++ ++M   +   +    N 
Sbjct: 263 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNI 322

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR  +AFK ++ +  +G  P+ +++  ++K  C+  + + A ++++ M  N 
Sbjct: 323 VINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN 382

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT I   C+ G +E+A  +++ M   G  +  +T N +++  C +  +D A 
Sbjct: 383 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL 442

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S   +    + ++Y TL+TG    E+ + A +L  EM  R   P+  T+N ++   
Sbjct: 443 ELFRSMPCKP---NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  ++AI+++ ++++ G  P+  T+NT+  G   +   E AL+  + +V K   PD+
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDV 559

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T + ++  L +E  +E+A++ F      G    ++ YN ++  LCK   +++A   L+ 
Sbjct: 560 ITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAY 619

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G L+EAQ   S++   G ++  +++
Sbjct: 620 MVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLIE 667



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 240/493 (48%), Gaps = 23/493 (4%)

Query: 37  KKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGML 96
            + G  P+      L+   C+ G   +A RV+     + S  DV+ YN L+ G+C  G L
Sbjct: 67  SRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL 126

Query: 97  EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
           + A RL   + S+ + PD  TY  LI    + GR  +A  L+D++   G +PN VT+ ++
Sbjct: 127 DAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVL 183

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           ++  CK    ++A  ++  M   G +P+ VTYN +I+  C+ G +++A  +++ +   G 
Sbjct: 184 LEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGC 243

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + +T++  T+L  LC  K+ D+   L     ++    +EV++  LI  + R     RA++
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           +  +M E +   +T   N +I  + + G+ + A   LN +   G  PD  ++ T++ G C
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
              +   A +   +MV  +  P+ VT N  +  LC++G++E+A+         G  V  V
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV 423

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN L++  C +  ++ A  L   M  K   P+  TY  + T L  + RL+ A +  + M
Sbjct: 424 TYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEM 480

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           +      H+   PN            ++++  +N  C +G   +A+++ E+  + G   N
Sbjct: 481 L------HRDCPPNV-----------VTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523

Query: 517 KSTYMNLMNGLIK 529
             TY  L +G+ K
Sbjct: 524 LITYNTLFDGITK 536


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 241/488 (49%), Gaps = 21/488 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP     N +LD L KKG+ + +  +  DM  +G  PN  TY  L+ G C+ G   +A R
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M + K  P V  Y +LI G C    + EA  + + M +  +LP++ TYNT+++ + 
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     +A +L  E+   G+ PN VT  I+I   CK  ++  A K + +M   G  P+  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LID  CKAGN+ EA  +   + +  +  +  T + ++  LC   +++EA  LL   
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K+G+  + V+Y TLI GY ++    +A+++  +M E+ I P+  T++ +I G  ++GK 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A+ +  E++  G++PD   +  +I G   +G  ++A + H +M E    P++ T + L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDS-----------------VTYNTLISSLCKER 409
           + GLC++G +  A+K F    L     D+                 V Y  LI  LC + 
Sbjct: 515 IDGLCKDGRISDAIKLF----LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+  A    S+M    L PD +T   I      +  L +     + +++ G I +  V  
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYR 630

Query: 470 NTSKTPEE 477
             +K  EE
Sbjct: 631 VLAKGYEE 638



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 200/414 (48%), Gaps = 48/414 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LP+  TYNT++D   K   + +  +L  +M   GL+PN  T+ IL+ G CK   
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A + +  M     +P+++ YN LI+G+C AG L EA  L  E+E  ++LPDV TY+ 
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       R  EA  L+ E+ + G  PNAVT+N +I  YCKEG ++KA ++   M E G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +T++TLID  CKAG ME A  +   M  KGL                        
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL------------------------ 469

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                        D V+Y  LI G+F+D     A +L  EM+E  + P+ FT + +I GL
Sbjct: 470 -----------LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 301 SQSGKTEQAIDML-------------NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            + G+   AI +              NEL +S   P+   +  +I G C++G++ KA +F
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
            + M     +PD+ TC +++ G  R   L   +      +  G   +S  Y  L
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 224/502 (44%), Gaps = 30/502 (5%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           K  ++P     N+++ G  K G      +V   M    + P+V TY  LI+G C  G   
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           +AFRL  EM   K+ P VV Y  LI       R  EA  +   +   G+ PN  T+N M+
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
             YCK   + KA ++ + M  +G  P+ VT+  LID  CK   M  A + +  M   G+ 
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N    N ++   C    L EA  L +   K     D  +Y  LI G    ++   A  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             EMK++  +P+  TYN +I G  + G  E+AI++ +++ + G+ P+  TF+T+I G+C 
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G++E A+  + +MV K   PD+V    L+ G  ++G  ++A +  +     G   +  T
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510

Query: 398 YNTLISSLCKERRLEDAFGLL-------------SEMEEKKLGPDRYTYAAIHTALVESG 444
            + LI  LCK+ R+ DA  L              +E++     P+   Y A+   L   G
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           R+ +A KF S M  +G                 + P   +    I  H      +D + +
Sbjct: 571 RIFKASKFFSDMRCSG-----------------LRPDVFTCIVIIQGHFRAMHLRDVMML 613

Query: 505 FEETRQKGIAINKSTYMNLMNG 526
             +  + GI  N S Y  L  G
Sbjct: 614 QADILKMGIIPNSSVYRVLAKG 635



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 191/359 (53%), Gaps = 13/359 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G LP+ VT+  ++D L K  ++   R  L DM   G+VPN   YN L+ GYCK G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +   + +++ LPDV+TY++LI G C    +EEA  L +EM+    LP+ VTYNT
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G   +A ++  ++ E GI+PN +T + +I  YCK GK++ A  +   M   G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y  LID + K GN +EAFR+   M   GL  N  TL+ ++  LC + ++ +A 
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 241 MLL------NSASKRGYYLD-------EVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            L       ++   +   LD        V Y  LI G   D +  +A K + +M+   + 
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           P  FT   +I G  ++      + +  ++L+ G+IP+ + +  +  G+   G ++ AL+
Sbjct: 589 PDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 220/441 (49%), Gaps = 23/441 (5%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
             F +   +ES K  P+V  +  LI  F E G   EA  +  ++D   + P     N+++
Sbjct: 111 SVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVL 165

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
               K+G+ D   K+  +M   G SP+ VTY TLID  C+ G+  +AFR+ D M  K + 
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
              +    ++  LC E ++ EA  +  +    G   +  +Y T++ GY +     +AL+L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           + EM    ++P+  T+  +I GL ++ +   A   L ++   G++P+   +N +I G+C 
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G + +AL  H+++ +    PD+ T +IL+ GLC    +E+A    +    KG   ++VT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNTLI   CKE  +E A  + S+M EK + P+  T++ +     ++G++E A    + MV
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
             G +                 P  ++Y+  I+ H   G  K+A ++ +E ++ G+  N 
Sbjct: 466 IKGLL-----------------PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 518 STYMNLMNGLIKRRKSISKAV 538
            T   L++GL K  + IS A+
Sbjct: 509 FTLSCLIDGLCKDGR-ISDAI 528



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 142/288 (49%), Gaps = 13/288 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD  TY+ ++  L    ++ E   LL +MKK+G +PN  TYN L+ GYCK G +++A+ 
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V   MT+    P++ T++ LI+G+C AG +E A  L  EM    LLPDVV Y  LI+  F
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHF 484

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI-------------V 173
           + G + EAF+L  E+ E G+ PN  T + +I   CK+G+I  A K+              
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT 544

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             ++ +  SP+ V Y  LI   C  G + +A +    M   GL+ +  T   I+      
Sbjct: 545 NELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
             L +  ML     K G   +   Y  L  GY        AL+  +++
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDL 652



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD V Y  ++D  FK G   E   L  +M++ GL PN  T + L+ G CK G + +A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 65  MRVVDLMTQ-----------NKSL--PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
           +++    T            ++SL  P+   Y  LI G C  G + +A +   +M    L
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
            PDV T   +I   F +    +   L  ++ + GI PN+  + ++ K Y + G +  A +
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647

Query: 172 IVRNMEENGFSPDCVTYNTL 191
              ++  +G    C   N L
Sbjct: 648 CSEDL--SGIGIGCSNLNDL 665



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 13/159 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL-------------SDMKKQGLVPNRTT 47
           M+  G  P+  T + ++D L K G++++   L              +++ +    PN   
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y  L+ G C  G + +A +    M  +   PDV+T  ++I G   A  L +   L+ ++ 
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
            + ++P+   Y  L   + ESG    A +  ++L   GI
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 267/520 (51%), Gaps = 17/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+  ++  L  +G++ +  ++L +M  +G  P    Y++++   C+ G  + ++RV
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M       D    N+++N  C  G ++EA  L +++       D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +L+DE+      PN VT N +I + C+ G  ++  +++  M E+G +PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G++E A  +++ M   GLK N +  NT+L  LC  ++  EA  LL+   
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++   LD+V++  L+  + ++   +R ++L ++M     MP   TY  +I G  + G  +
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G CS G+   A +  ++M+++   P+ VT N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++E+A++  +  ++ G + D ++Y+T+I  L K  + E+A  LL+ M  K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+   Y++I  AL   GR+                 ++V+Q   +     I   ++ Y+ 
Sbjct: 529 PNTIIYSSIACALSREGRV-----------------NKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            I+  C +     A+  F      G   N+STY  L+ GL
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 222/418 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC  D V+YN +L  L    +  +V +L+ +M +    PN  T+N L+   C+ G  + 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              V+  M+++   PD+  Y  +I+G C  G LE A  +   M S  L P+VV YNT++ 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + R  EA +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M  +G  P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY T+I+  CK G ++EA  ++  M   G K NT++   +L  LC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   ++G   + V++ TLI    +     +A++L  +M      P   +Y+ +I GL ++
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GKTE+A+++LN ++  G+ P+   +++I      EG+V K +Q  + + + + + D V  
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           N ++S LC+    ++A+ FF   +  G   +  TY  LI  L  E   ++A  LLSE+
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 230/468 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  D    N +L+A+ ++G ++E   LL  +   G   +  +YN ++ G C    
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   ++D M +    P++ T+N LI   C  G+ E    +  +M      PD+  Y T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G    A ++++ +  +G+KPN V +N ++K  C   +  +A +++  M +  
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL S S  G   + VSY  ++ G     +   A +L  +M ++   P+  T+N +I  L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  EQAI++L ++L +G  PD  +++T+I G    G+ E+AL+  N MV K   P+ 
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  + +   L REG + K ++ F +        D+V YN +ISSLCK    + A    + 
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G  +EAQ+  S +   G +   +++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMR 639



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 246/508 (48%), Gaps = 17/508 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+ IL+A  + G       +L  M  +G   +    N++++  C+ G + EA
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +       D+ +YN ++ G C A    +   L  EM  +   P++VT+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G      +++ ++ EHG  P+   +  +I   CKEG ++ A +I+  M   G  P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V YNT++   C A   +EA  ++  M +K   ++ +T N ++   C    +D    LL 
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 380

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL  +G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A +++++++Q G  P+  TFNT+I+  C +G VE+A++   +M+     PD+++ +
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL + G  E+AL+     + KG + +++ Y+++  +L +E R+     +   +++ 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  D   Y A+ ++L +    + A  F + MV  G        PN S           +
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG------CMPNES-----------T 603

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKG 512
           Y+  I    S+G  K+A ++  E   +G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 197/416 (47%), Gaps = 20/416 (4%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VV YN ++  +  +G+   A +L   +    + PNA T   +++  C  G+I  A +++ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M   G +P    Y+ +++A C++G    + R+++ M  KG  ++T   N +L+ +C + 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            +DEA  LL   +  G   D VSY  ++ G    ++     +L DEM      P+  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I  L ++G  E+  ++L ++ + G  PD   + TII G C EG +E A +  N+M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KP++V  N +L GLC     ++A +       K   +D VT+N L+   C+   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL +M      PD  TY  +     + G ++EA      M   G       +PNT   
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNT--- 426

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                   +SY+  +   CS GR+ DA ++  +  Q+G   N  T+  L+N L K+
Sbjct: 427 --------VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 262/529 (49%), Gaps = 19/529 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D +    ++D LFK G++ E   L  ++ +  LVPN  TY+ L+ G CKLG +  A   +
Sbjct: 93  DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESAL 152

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M +   +P+V TY+ LING+   G+L +AF++ ++M     +P++ TY  L++  F++
Sbjct: 153 HEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKA 212

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A  L  ++ + G+K N    +  +    + G++++A ++V  M   G  PD V Y
Sbjct: 213 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 272

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             L+D   K+G +  A  +   M  K +  + +T N +++ L    K D    + ++  +
Sbjct: 273 TNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTES-IYSAMRE 331

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D  +Y T++ G F+      AL+LW+EMK R+++P+  T N MI GL ++G+ E 
Sbjct: 332 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMEN 391

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AID+L E++  G+ P  TT+  +++      + +  LQ H  +V    K D    NIL+S
Sbjct: 392 AIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILIS 451

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LC+ G+  KA    +    +G   D+ TYN LI   C    L+ AF   S M  +++ P
Sbjct: 452 NLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSP 511

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  TY  +   L ++G + EA    S + + G +                 P++ +Y   
Sbjct: 512 DIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV-----------------PNACTYETL 554

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +  HC     K+ L+I+ E   KG  I K    N++ G   +   + +A
Sbjct: 555 MCGHCKVRNTKECLRIYCEMVIKGF-IPKPRAYNMLIGYFSKMGKMKQA 602



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 264/568 (46%), Gaps = 53/568 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD VT+ +IL  L K GKL+E + LL +M K G+  N  +Y IL+    K G 
Sbjct: 15  MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 74

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+  +  M    +  DV    +LI+G   +G ++EA  L   +  L L+P+ +TY+ 
Sbjct: 75  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 134

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A   + E++E    PN +T++ +I  Y K+G +  A K++R M    
Sbjct: 135 LIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 194

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY  L+D + KAG  + A  +   M + GLK N   L+  ++ +    +++EA 
Sbjct: 195 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 254

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   +  G   D V+Y  L+ G+ +  K + AL L  EM  + ++    T+N +I  L
Sbjct: 255 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 314

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK++    + + + + G+ PD  T+NT+++G   +G    AL+  N+M  +   P+ 
Sbjct: 315 FKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNA 373

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKG------------------------------ 390
           +TCNI+++GLC  G +E A+   +  +L G                              
Sbjct: 374 ITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHEL 433

Query: 391 -----KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                  VD   YN LIS+LCK      A  +L +MEE+ +  D  TY A+      S  
Sbjct: 434 LVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSH 493

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           L+ A    S M+                  E + P   +Y+  +      G   +A  + 
Sbjct: 494 LKRAFMTYSTMLS-----------------ERVSPDIETYNLLLGGLSKAGLIHEADDLL 536

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKS 533
            E +++G+  N  TY  LM G  K R +
Sbjct: 537 SEIKKRGLVPNACTYETLMCGHCKVRNT 564



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 229/460 (49%), Gaps = 1/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C+P+ +TY+++++   K+G L++   +L  M  +  +PN  TY IL+ G  K GW
Sbjct: 155 MEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGW 214

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ +   M Q     +V+  +  +N    +G +EEA  L  +M S  L PD+V Y  
Sbjct: 215 QDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTN 274

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +SG+   A  L  E+    +  + VT N++I    K GK D    I   M E G
Sbjct: 275 LMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMG 333

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  TYNT+++ N K GN   A  + + M  + L  N IT N +++ LC   +++ A 
Sbjct: 334 LSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAI 393

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L      G Y    +Y  L+    +  +A+  L+  + +   Q+      YN +I  L
Sbjct: 394 DILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNL 453

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G T +A  +L ++ + G+I D TT+N +IHG+C    +++A   ++ M+ +   PDI
Sbjct: 454 CKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDI 513

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+LL GL + G++ +A         +G   ++ TY TL+   CK R  ++   +  E
Sbjct: 514 ETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCE 573

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  K   P    Y  +     + G++++A++  + M   G
Sbjct: 574 MVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKG 613



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 219/462 (47%), Gaps = 20/462 (4%)

Query: 5   GCLPDNVTYNTILDALF----KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           G L DNV    ILDA      + G++ E  +L++ M   GL P+   Y  L+ G+ K G 
Sbjct: 228 GGLKDNVF---ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGK 284

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +   MT    + D+ T+N+LIN     G   +   +   M  + L PD+ TYNT
Sbjct: 285 VSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNT 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N  F+ G    A +L +E+    + PNA+T NIMI   C+ G+++ A  I++ M   G
Sbjct: 344 MLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY  L++ + K+   +   +  +++    LK++    N ++  LC      +A 
Sbjct: 404 LYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKAT 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    +RG   D  +Y  LI GY       RA   +  M   ++ P   TYN ++ GL
Sbjct: 464 AVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++G   +A D+L+E+ + G++P+  T+ T++ G C     ++ L+ + +MV K F P  
Sbjct: 524 SKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKP 583

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED------- 413
              N+L+    + G +++A +       KG +    TY+ LI   C   ++ D       
Sbjct: 584 RAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKI 643

Query: 414 -----AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
                A  L  EM ++   P   T A I +     G+  +A+
Sbjct: 644 SYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADAR 685



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 231/484 (47%), Gaps = 19/484 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA+ + + M  +   PDV T+  ++ G C  G L E   L +EM  + +  + V+Y  
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  F++G+  EA   +  +   G   + +   ++I    K G+I +A  +  N+ +  
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TY+ LID  CK G++  A   +  M  K    N IT +++++    +  L +A+
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L     +    +  +Y  L+ G F+    + AL L+ +MK+  +  + F  +A +  +
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+ E+A +++ ++   G+ PD   +  ++ GF   G+V  AL    +M  K+   DI
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L++ L + G  +     + +    G + D  TYNT+++   K+     A  L +E
Sbjct: 305 VTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNE 363

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPE 476
           M+ +KL P+  T   +   L E+GR+E A      MV  G       ++++   +SK+  
Sbjct: 364 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRR 423

Query: 477 --------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                         ++      Y+  I+  C  G  + A  + ++  ++GI  + +TY  
Sbjct: 424 ADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNA 483

Query: 523 LMNG 526
           L++G
Sbjct: 484 LIHG 487



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 35/337 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT+L+  FKKG      +L ++MK + L+PN  T NI+++G C+ G 
Sbjct: 329 MREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGR 388

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+ ++  M      P   TY +L+N    +   +   +  + + +++L  D   YN 
Sbjct: 389 MENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNI 448

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G + +A  ++ +++E GI  +  T+N +I  YC    + +A      M    
Sbjct: 449 LISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSER 508

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  TYN L+    KAG + EA  ++  + ++GL  N  T                  
Sbjct: 509 VSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACT------------------ 550

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                            Y TL+ G+ +       L+++ EM  +  +P    YN +I   
Sbjct: 551 -----------------YETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYF 593

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           S+ GK +QA +++NE+   G+ P  TT++ +I G+C+
Sbjct: 594 SKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCN 630


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 273/583 (46%), Gaps = 64/583 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N +++ L  +G   +   L+  M+K G  P   TYN ++  YCK G  K A+ +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M       DV TYNMLI+  C +  + + + L ++M    + P+ VTYNTLIN F  
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+ + A +L++E+   G+ PN VT N +I  +  EG   +A K+   ME  G +P  V+
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CK    + A      M R G+ +  IT   ++  LC    LDEA +LLN  S
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 248 KRGYYLDEVSYGTLITGY-----FRDEK------------------------------AN 272
           K G   D V+Y  LI G+     F+  K                                
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A+++++ M         FT+N ++  L ++GK  +A + +  +   G++P+  +F+ +I
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G+ + G+  KA    ++M +    P   T   LL GLC+ G L +A KF +S      A
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR------- 445
           VD+V YNTL++++CK   L  A  L  EM ++ + PD YTY ++ + L   G+       
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670

Query: 446 LEEAQK-------------FTSIMVETGK----INHQVVQPNTSKTPEEIDPSSISYSEK 488
            +EA+              F   M + G+    I  +    N   TP+ +  +++     
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----- 725

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           I+ +   G+ +    +  E   +    N +TY  L++G  KR+
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 249/501 (49%), Gaps = 18/501 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY+ +++   K G+    ++++  + + GL PN   Y+ L+   C++G LKEA+R+
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M       D +T+N+L+   C AG + EA    + M S  +LP+ V+++ LIN +  
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG  ++AF + DE+ + G  P   T+  ++K  CK G + +A K ++++     + D V 
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL+ A CK+GN+ +A  +   M ++ +  ++ T  +++  LC + K   A +    A 
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 248 KRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            RG  L ++V Y   + G F+  +    +   ++M      P   T NAMI G S+ GK 
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+  D+L E+      P+ TT+N ++HG+     V  +   +  ++     PD +TC+ L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C   +LE  LK  +++I +G  VD  T+N LIS  C    +  AF L+  M    +
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D+ T  A+ + L  + R +E++     M + G                 I P S  Y 
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-----------------ISPESRKYI 898

Query: 487 EKINEHCSQGRYKDALQIFEE 507
             IN  C  G  K A  + EE
Sbjct: 899 GLINGLCRVGDIKTAFVVKEE 919



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 269/531 (50%), Gaps = 17/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  P   T N IL ++ K G+   V   L +M K+ + P+  T+NIL++  C  G  ++
Sbjct: 152 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 211

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  ++  M ++   P + TYN +++ +C  G  + A  L   M+S  +  DV TYN LI+
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 271

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               S R  + + L+ ++ +  I PN VT+N +I  +  EGK+  A +++  M   G SP
Sbjct: 272 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 331

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VT+N LID +   GN +EA +M  +M  KGL  + ++   +L  LC   + D A    
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G  +  ++Y  +I G  ++   + A+ L +EM +  I P   TY+A+I G  + 
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + A +++  + + G+ P+   ++T+I+  C  G +++A++ +  M+ +    D  T 
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+L++ LC+ G + +A +F R     G   ++V+++ LI+          AF +  EM +
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P  +TY ++   L + G L EA+KF   +       H V        P  +D  ++
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL-------HAV--------PAAVD--TV 614

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Y+  +   C  G    A+ +F E  Q+ I  +  TY +L++GL ++ K++
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/584 (23%), Positives = 242/584 (41%), Gaps = 91/584 (15%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D+ T+N ++ +L K GK+ E  + +  M   G++PN  +++ L++GY   G   +A  V 
Sbjct: 507  DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            D MT+    P  +TY  L+ G C  G L EA +  K + ++    D V YNTL+    +S
Sbjct: 567  DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626

Query: 129  GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-------------- 174
            G   +A  L  E+ +  I P++ T+  +I   C++GK   A    +              
Sbjct: 627  GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686

Query: 175  ----------------------NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                   M+  G +PD VT N +ID   + G +E+   ++  MG
Sbjct: 687  YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746

Query: 213  RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             +    N  T N +LH                                   GY + +  +
Sbjct: 747  NQNGGPNLTTYNILLH-----------------------------------GYSKRKDVS 771

Query: 273  RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             +  L+  +    I+P   T ++++ G+ +S   E  + +L   +  G+  D  TFN +I
Sbjct: 772  TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 333  HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
               C+ G++  A      M       D  TC+ ++S L R    +++         +G +
Sbjct: 832  SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 393  VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA--- 449
             +S  Y  LI+ LC+   ++ AF +  EM   K+ P     +A+  AL + G+ +EA   
Sbjct: 892  PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951

Query: 450  -------------QKFTSIMVETGKINHQVVQPNTSKTPEE---IDPSSISYSEKINEHC 493
                           FT++M    K N  V++    +       +    +SY+  I   C
Sbjct: 952  LRFMLKMKLVPTIASFTTLMHLCCK-NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1010

Query: 494  SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            ++G    A +++EE +  G   N +TY  L+ GL+ R  + S A
Sbjct: 1011 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1054



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 157/358 (43%), Gaps = 36/358 (10%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G  PD VT N ++D   + GK+ +  DLL +M  Q   PN TTYNIL+ GY K   
Sbjct: 710  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  +  +   +  N  LPD  T + L+ G C + MLE   ++ K      +  D  T+N 
Sbjct: 770  VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI++   +G    AF L+  +   GI  +  T + M+    +  +  ++  ++  M + G
Sbjct: 830  LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAF-------------------RMMDVMGRKG------ 215
             SP+   Y  LI+  C+ G+++ AF                    M+  + + G      
Sbjct: 890  ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949

Query: 216  ------LKMNTI----TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
                  LKM  +    +  T++H  C    + EA  L    S  G  LD VSY  LITG 
Sbjct: 950  LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID-MLNELLQSGMI 322
                    A +L++EMK    + +  TY A+I GL          D +L +LL  G I
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1067


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 273/583 (46%), Gaps = 64/583 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N +++ L  +G   +   L+  M+K G  P   TYN ++  YCK G  K A+ +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M       DV TYNMLI+  C +  + + + L ++M    + P+ VTYNTLIN F  
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+ + A +L++E+   G+ PN VT N +I  +  EG   +A K+   ME  G +P  V+
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CK    + A      M R G+ +  IT   ++  LC    LDEA +LLN  S
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 248 KRGYYLDEVSYGTLITGY-----FRDEK------------------------------AN 272
           K G   D V+Y  LI G+     F+  K                                
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A+++++ M         FT+N ++  L ++GK  +A + +  +   G++P+  +F+ +I
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G+ + G+  KA    ++M +    P   T   LL GLC+ G L +A KF +S      A
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR------- 445
           VD+V YNTL++++CK   L  A  L  EM ++ + PD YTY ++ + L   G+       
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670

Query: 446 LEEAQK-------------FTSIMVETGK----INHQVVQPNTSKTPEEIDPSSISYSEK 488
            +EA+              F   M + G+    I  +    N   TP+ +  +++     
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----- 725

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           I+ +   G+ +    +  E   +    N +TY  L++G  KR+
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 249/501 (49%), Gaps = 18/501 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY+ +++   K G+    ++++  + + GL PN   Y+ L+   C++G LKEA+R+
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M       D +T+N+L+   C AG + EA    + M S  +LP+ V+++ LIN +  
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG  ++AF + DE+ + G  P   T+  ++K  CK G + +A K ++++     + D V 
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL+ A CK+GN+ +A  +   M ++ +  ++ T  +++  LC + K   A +    A 
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 248 KRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            RG  L ++V Y   + G F+  +    +   ++M      P   T NAMI G S+ GK 
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+  D+L E+      P+ TT+N ++HG+     V  +   +  ++     PD +TC+ L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C   +LE  LK  +++I +G  VD  T+N LIS  C    +  AF L+  M    +
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D+ T  A+ + L  + R +E++     M + G                 I P S  Y 
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-----------------ISPESRKYI 898

Query: 487 EKINEHCSQGRYKDALQIFEE 507
             IN  C  G  K A  + EE
Sbjct: 899 GLINGLCRVGDIKTAFVVKEE 919



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 269/531 (50%), Gaps = 17/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  P   T N IL ++ K G+   V   L +M K+ + P+  T+NIL++  C  G  ++
Sbjct: 152 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 211

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  ++  M ++   P + TYN +++ +C  G  + A  L   M+S  +  DV TYN LI+
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 271

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               S R  + + L+ ++ +  I PN VT+N +I  +  EGK+  A +++  M   G SP
Sbjct: 272 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 331

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VT+N LID +   GN +EA +M  +M  KGL  + ++   +L  LC   + D A    
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G  +  ++Y  +I G  ++   + A+ L +EM +  I P   TY+A+I G  + 
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + A +++  + + G+ P+   ++T+I+  C  G +++A++ +  M+ +    D  T 
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+L++ LC+ G + +A +F R     G   ++V+++ LI+          AF +  EM +
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P  +TY ++   L + G L EA+KF   +       H V        P  +D  ++
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL-------HAV--------PAAVD--TV 614

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Y+  +   C  G    A+ +F E  Q+ I  +  TY +L++GL ++ K++
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/588 (23%), Positives = 242/588 (41%), Gaps = 99/588 (16%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D+ T+N ++ +L K GK+ E  + +  M   G++PN  +++ L++GY   G   +A  V 
Sbjct: 507  DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            D MT+    P  +TY  L+ G C  G L EA +  K + ++    D V YNTL+    +S
Sbjct: 567  DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626

Query: 129  GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-------------- 174
            G   +A  L  E+ +  I P++ T+  +I   C++GK   A    +              
Sbjct: 627  GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686

Query: 175  ----------------------NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                   M+  G +PD VT N +ID   + G +E+   ++  MG
Sbjct: 687  YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746

Query: 213  RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             +    N  T N +LH                                   GY + +  +
Sbjct: 747  NQNGGPNLTTYNILLH-----------------------------------GYSKRKDVS 771

Query: 273  RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             +  L+  +    I+P   T ++++ G+ +S   E  + +L   +  G+  D  TFN +I
Sbjct: 772  TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 333  HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
               C+ G++  A      M       D  TC+ ++S L R    +++         +G +
Sbjct: 832  SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 393  VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA--- 449
             +S  Y  LI+ LC+   ++ AF +  EM   K+ P     +A+  AL + G+ +EA   
Sbjct: 892  PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951

Query: 450  -------------QKFTSIMVETGK-------INHQVVQPNTSKTPEEIDPSSISYSEKI 489
                           FT++M    K       +  +VV  N       +    +SY+  I
Sbjct: 952  LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG-----LKLDLVSYNVLI 1006

Query: 490  NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
               C++G    A +++EE +  G   N +TY  L+ GL+ R  + S A
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1054



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 157/358 (43%), Gaps = 36/358 (10%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G  PD VT N ++D   + GK+ +  DLL +M  Q   PN TTYNIL+ GY K   
Sbjct: 710  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  +  +   +  N  LPD  T + L+ G C + MLE   ++ K      +  D  T+N 
Sbjct: 770  VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI++   +G    AF L+  +   GI  +  T + M+    +  +  ++  ++  M + G
Sbjct: 830  LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAF-------------------RMMDVMGRKG------ 215
             SP+   Y  LI+  C+ G+++ AF                    M+  + + G      
Sbjct: 890  ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949

Query: 216  ------LKMNTI----TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
                  LKM  +    +  T++H  C    + EA  L    S  G  LD VSY  LITG 
Sbjct: 950  LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID-MLNELLQSGMI 322
                    A +L++EMK    + +  TY A+I GL          D +L +LL  G I
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1067


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 269/529 (50%), Gaps = 20/529 (3%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           GFG   D +T N IL  ++ +  +    D  + + + G  PN  T++ L+  YCK G L 
Sbjct: 267 GFGL--DIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLD 324

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A  + D+M  N   PD+  Y++LI+G   AG LE+  RL        +  DVV +++ +
Sbjct: 325 KAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAM 384

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + + + G      ++   +   GI PN V+ +I+IK +C+ G+I +AC +   + + GF 
Sbjct: 385 DAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFE 444

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P  +TY+ LI   CK+GN+ + F + + M +K  + +TI  + +++ LC +  + +A   
Sbjct: 445 PSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRF 504

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              A  RG   +  +  TL+  + R +    A+K++  M    I   T TY  +I G +Q
Sbjct: 505 FFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQ 564

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ ++A+ +  ++L+    PD  T+ T+I G C   +    L   + M + +  PDI  
Sbjct: 565 FGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAI 624

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N+L++   REG LE AL  F   + +G   D  T+NT+I   C  +RL+DA  L ++M 
Sbjct: 625 YNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMT 684

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            ++L P+  T+  +  A    GR+++A    S M+E G              PE   P+ 
Sbjct: 685 SEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG--------------PE---PNL 727

Query: 483 ISYSEKINEHC-SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           ++YS  I+ +  SQ   +  L+++ E  +  IA N  +Y  L++GL KR
Sbjct: 728 VTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKR 776



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 255/507 (50%), Gaps = 18/507 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD + Y+ ++D LFK G+L + + LL     +G+  +   ++  +  Y K+G 
Sbjct: 333 MAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGD 392

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L   +++   M      P+V + ++LI G+C  G + EA  L  ++  L   P ++TY+ 
Sbjct: 393 LGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSA 452

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +SG   + F L +++ +   +P+ + ++++I   CK+G +  A +        G
Sbjct: 453 LIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRG 512

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+  T NTL+D+ C+   +  A ++  +MG   +K +T+T   ++       ++DEA 
Sbjct: 513 LSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEAL 572

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ML     K+ +  D ++Y TLI G  + +K++  L ++D M +  + P    YN +I   
Sbjct: 573 MLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMH 632

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G  E A+ +   +++ G  PD  TFNT+I  +C+  +++ A+Q   KM  +  +P+ 
Sbjct: 633 SREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNA 692

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR-LEDAFGLLS 419
           +T  IL+   CREG ++ A+  F   + +G   + VTY+ LI    K +  +E    L +
Sbjct: 693 ITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYN 752

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM E  + P+  +Y+ +   L + G ++EA       ++                 + + 
Sbjct: 753 EMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALD-----------------KHLL 795

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFE 506
           P  I+Y+  I  +C  GR  +A+ +++
Sbjct: 796 PDVIAYTILIRGYCKVGRLTEAMMLYD 822



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 225/428 (52%), Gaps = 1/428 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V+ + ++    + G++ E   L   + K G  P+  TY+ L++G+CK G L++ 
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M + +  PD   Y++LING C  G++ +A R   +  +  L P+V T NTL++ 
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDS 526

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F      + A K+   +    IK + VT+ I+IK   + G++D+A  +   M +  F PD
Sbjct: 527 FCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPD 586

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY TLID  CK         + D M +  +  +    N +++    E  L+ A  L  
Sbjct: 587 VITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFV 646

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG   D  ++ T+I  Y   ++ + A++L+ +M   Q+ P+  T+  +I    + G
Sbjct: 647 HVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREG 706

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHG-FCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           + + A+ M +++L+ G  P+  T++ +IHG F S+  +E  L+ +N+M+E +  P+IV+ 
Sbjct: 707 RMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSY 766

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +IL+ GLC+ G++++A   FR  + K    D + Y  LI   CK  RL +A  L   M  
Sbjct: 767 SILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLL 826

Query: 424 KKLGPDRY 431
            +L PDR+
Sbjct: 827 NRLTPDRF 834



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 255/588 (43%), Gaps = 79/588 (13%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNI--LVSGYC------KLG 59
           +V Y  ++++  +KG  ++  D+   +  +G+   PN     +  L+  +C      K G
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYG 226

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            L  AMR      Q  S+     Y  ++N + N G +E   R  K +       D++T N
Sbjct: 227 ELCSAMR-----EQPFSV-----YEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCN 276

Query: 120 TLINRFF---ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            ++   +   + G + + F ++  +   G KPN VT + +I  YCKEG +DKA  +   M
Sbjct: 277 KILKGIWMQNDIGVADDYFNMVVRI---GPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVM 333

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM------------------ 218
             NG +PD + Y+ LID   KAG +E+  R++ V   KG+K+                  
Sbjct: 334 AGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDL 393

Query: 219 -----------------NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
                            N ++ + ++   C   ++ EA  L     K G+    ++Y  L
Sbjct: 394 GRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSAL 453

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G+ +         L+++M +++  P T  Y+ +I GL + G    A+    + +  G+
Sbjct: 454 IAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGL 513

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+  T NT++  FC    +  A++ +  M   + K D VT  IL+ G  + G +++AL 
Sbjct: 514 SPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALM 573

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F   + K    D +TY TLI  LCK ++      +   M +  + PD   Y  +     
Sbjct: 574 LFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHS 633

Query: 442 ESGRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEEIDPSSI 483
             G LE A      +VE G                  K     VQ     T E++ P++I
Sbjct: 634 REGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAI 693

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +++  I+  C +GR  DA+ +F +  ++G   N  TY  L++G  K +
Sbjct: 694 TFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQ 741



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 221/500 (44%), Gaps = 20/500 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
           L+  RD   D+       +   Y  L+  YC+ G   +++ +   +             +
Sbjct: 151 LDAFRDGFCDLDSTN---HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYL 207

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+    ++  +E       E+ S         Y  ++NRF   G      +    L + G
Sbjct: 208 LLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGG 267

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
              + +T N ++K    +  I  A      +   G  P+ VT++TLIDA CK GN+++AF
Sbjct: 268 FGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAF 327

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + DVM   G+  + I  + ++  L    +L++   LL  A  +G  LD V + + +  Y
Sbjct: 328 VLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAY 387

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +     R ++++  M    I P+  + + +I G  Q+G+  +A  +  ++L+ G  P  
Sbjct: 388 VKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSI 447

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T++ +I GFC  G +      +  M++K  +PD +  ++L++GLC++G++  AL+FF  
Sbjct: 448 LTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQ 507

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + +G + +  T NTL+ S C+ + +  A  +   M    +  D  TY  +     + GR
Sbjct: 508 AVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGR 567

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           ++EA      M++                 ++  P  I+Y   I+  C   +    L IF
Sbjct: 568 VDEALMLFFQMLK-----------------KDFKPDVITYCTLIDGLCKLKKSSAGLCIF 610

Query: 506 EETRQKGIAINKSTYMNLMN 525
           +   +  +A + + Y  L+N
Sbjct: 611 DFMCKNAVAPDIAIYNVLIN 630



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 89/164 (54%), Gaps = 1/164 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA-MR 66
           P+ +T+  ++DA  ++G++++   + S M ++G  PN  TY+ L+ GY K   + E+ ++
Sbjct: 690 PNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLK 749

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M +N   P++ +Y++LI+G C  G+++EA    +      LLPDV+ Y  LI  + 
Sbjct: 750 LYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYC 809

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + GR  EA  L D +  + + P+      + ++  K+      C
Sbjct: 810 KVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEYQLKKAGAKHLC 853


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 231/433 (53%), Gaps = 4/433 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V Y T++ AL  +G + E   LL +M   G   +  T+N +V G C LG 
Sbjct: 206 MARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGH 265

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R+VD M  +   P V TY  L+ G C     +EA+ +   +  +    +VV  NT
Sbjct: 266 VREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNT 321

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I      G+   A +L + +   G  P+  T+NI++   CK G+   A +++  MEE G
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG 381

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY+TL+ + C+ G  ++A  M+D M  KG  MN+   N I++ L  + KLDEA 
Sbjct: 382 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAM 441

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     +G   D  +Y T+I     +++ + A  ++  + E  ++ +  TYN +I  L
Sbjct: 442 RLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG+ ++ + + NE++  G   D  ++N +I   C EG V++++    +M+ K  KP+ 
Sbjct: 502 LHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNN 561

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N+L++ LC+ G +  AL+  +  + +G   D VTYNTLI+ LCK      A  LL +
Sbjct: 562 FSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEK 621

Query: 421 MEEKKLGPDRYTY 433
           +  + + PD  TY
Sbjct: 622 LPNENVHPDIVTY 634



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 249/523 (47%), Gaps = 21/523 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T+     AL + G+  +   LL  M + G VP+   Y  ++      G + EA  +
Sbjct: 178 PTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATL 237

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M       DV T+N ++ G C  G + EA RL   M      P VVTY  L+     
Sbjct: 238 LDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCR 297

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + ++ EA+ ++  + E     N V  N +I+    EGK+ +A ++   M   G  PD  T
Sbjct: 298 TRQADEAYAMLGRVPE----VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHT 353

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+   CK G    A RM+D M  KG   N +T +T+LH+ C     D+A  +L+  S
Sbjct: 354 YNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMS 413

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G+ ++   Y  +I    +D K + A++L  EMK +   P   TYN +I+ L  + + +
Sbjct: 414 AKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMD 473

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +   LL+ G++ +  T+NT+IH     G+ ++ L+  N+MV      D+V+ N L+
Sbjct: 474 EAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLI 533

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+EG +++++      + KG   ++ +YN LI+ LCK  ++ DA  L  EM  + L 
Sbjct: 534 KALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLT 593

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +   L + G    A      +            PN     E + P  ++Y+ 
Sbjct: 594 PDIVTYNTLINGLCKVGWTHAALNLLEKL------------PN-----ENVHPDIVTYNI 636

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I+ HC      DA  + ++    GI  N+ T+  ++   +++
Sbjct: 637 LISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 209/406 (51%), Gaps = 8/406 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP--NRTTYNILVSGYCKLGWLK 62
           GC P  VTY  +L  L +  + +E   +L      G VP  N    N ++ G    G L 
Sbjct: 280 GCTPSVVTYGFLLRGLCRTRQADEAYAML------GRVPEVNVVMLNTVIRGCLAEGKLA 333

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A  + ++M      PDV TYN+L++G C  G    A R+  EME     P++VTY+TL+
Sbjct: 334 RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLL 393

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F  +G   +A  ++D++   G   N+  +N +I    K+GK+D+A ++V+ M+  G  
Sbjct: 394 HSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCK 453

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  TYNT+I   C    M+EA  +   +  +G+  N IT NT++H L    +  E   L
Sbjct: 454 PDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRL 513

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N     G  LD VSY  LI    ++   +R++ L +EM  + I P+ F+YN +I  L +
Sbjct: 514 ANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCK 573

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +GK   A+++  E+L  G+ PD  T+NT+I+G C  G    AL    K+  ++  PDIVT
Sbjct: 574 AGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVT 633

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            NIL+S  C+  +L+ A       +  G   +  T+  ++ +  ++
Sbjct: 634 YNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 225/471 (47%), Gaps = 22/471 (4%)

Query: 63  EAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            A+ ++D M +  ++ P   +YN +++    A    +A  L + M   ++ P   T+   
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
                  GR+ +A  L+  +  HG  P+AV +  +I     +G + +A  ++  M   G 
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           + D  T+N ++   C  G++ EA R++D M   G   + +T   +L  LC  ++ DEAY 
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L    +    ++ V   T+I G   + K  RA +L++ M  +   P   TYN ++ GL 
Sbjct: 307 MLGRVPE----VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+   A+ ML+E+ + G  P+  T++T++H FC  G  + A    ++M  K F  +  
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++  L ++G L++A++  +    +G   D  TYNT+I  LC   ++++A  +   +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E+ +  +  TY  +  AL+ SGR +E  +  + MV  G              P ++   
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG-------------CPLDV--- 526

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +SY+  I   C +G    ++ + EE   KGI  N  +Y  L+N L K  K
Sbjct: 527 -VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGK 576



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 183/365 (50%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  NT++     +GKL    +L   M  +G  P+  TYNIL+ G CKLG    A+R++D 
Sbjct: 317 VMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE 376

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    P++ TY+ L++ +C  GM ++A  +  +M +     +   YN +I    + G+
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA +L+ E+   G KP+  T+N +I   C   ++D+A  I  N+ E G   + +TYNT
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI A   +G  +E  R+ + M   G  ++ ++ N ++  LC E  +D + MLL     +G
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  SY  LI    +  K   AL+L  EM  + + P   TYN +I GL + G T  A+
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 616

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++L +L    + PD  T+N +I   C    ++ A    +K V     P+  T  +++   
Sbjct: 617 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676

Query: 371 CREGI 375
            R+ +
Sbjct: 677 VRQPV 681



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 153/297 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTY+T+L +  + G  ++ R +L  M  +G   N   YN ++    K G 
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EAMR+V  M      PD+ TYN +I   CN   ++EA  +   +    ++ + +TYNT
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    SGR  E  +L +E+  HG   + V++N +IK  CKEG +D++  ++  M   G
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  +YN LI+  CKAG + +A  +   M  +GL  + +T NT+++ LC       A 
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 616

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            LL        + D V+Y  LI+ + +    + A  L D+     I+P+  T+  M+
Sbjct: 617 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 231/426 (54%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+NT++  LF +GK++E   L+  M + G  P+  TYN +V+G C+ G    
Sbjct: 142 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 201

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ ++  M +     DV+TY+ +I+  C  G ++ A  L KEME+  +   VVTYN+L+ 
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G+  +   L+ ++    I PN +T N+++  + KEGK+ +A ++ + M   G SP
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TYNTL+D  C    + EA  M+D+M R     + +T  +++   C  K++D+   + 
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 381

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            + SKRG   + V+Y  L+ G+ +  K   A +L+ EM    ++P   TY  ++ GL  +
Sbjct: 382 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK E+A+++  +L +S M      + TII G C  G+VE A      +  K  KP+++T 
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +++SGLC++G L +A    R     G A +  TYNTLI +  ++  L  +  L+ EM+ 
Sbjct: 502 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561

Query: 424 KKLGPD 429
                D
Sbjct: 562 CGFSAD 567



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 234/449 (52%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++   +  K      +L  + K G  P+ TT+N L+ G    G + EA+ +VD M
Sbjct: 115 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 174

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N   PDV TYN ++NG C +G    A  L ++ME   +  DV TY+T+I+     G  
Sbjct: 175 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 234

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L  E++  GIK + VT+N +++  CK GK +    ++++M      P+ +T+N L
Sbjct: 235 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D   K G ++EA  +   M  +G+  N IT NT++   C + +L EA  +L+   +   
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V++ +LI GY   ++ +  +K++  + +R ++ +  TY+ ++ G  QSGK + A +
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E++  G++PD  T+  ++ G C  G++EKAL+    + +      IV    ++ G+C
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G +E A   F S   KG   + +TY  +IS LCK+  L +A  LL +MEE    P+  
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 534

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +  A +  G L  + K    M   G
Sbjct: 535 TYNTLIRAHLRDGDLTASAKLIEEMKSCG 563



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 265/572 (46%), Gaps = 44/572 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTYN+I++ + + G  +   DLL  M+++ +  +  TY+ ++   C+ G +  A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M        V TYN L+ G C AG   +   L K+M S +++P+V+T+N L++ 
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+  EA +L  E+   GI PN +T+N ++  YC + ++ +A  ++  M  N  SPD
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+ +LI   C    +++  ++   + ++GL  N +T + ++   C   K+  A  L  
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++YG L+ G   + K  +AL++++++++ ++      Y  +I G+ + G
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A ++   L   G+ P+  T+  +I G C +G + +A     KM E    P+  T N
Sbjct: 478 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 537

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE-RRLEDAFGL------ 417
            L+    R+G L  + K        G + D+ +   +I  L    +RL   + L      
Sbjct: 538 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKS 597

Query: 418 --------------LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ--------KFTSI 455
                         LS +   K+ P      +++   +E+  +  A+        + +S+
Sbjct: 598 RQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSV 657

Query: 456 MVETGKINHQVVQPNTSKT------------PEEIDPSSISYSEKINEHCSQGR---YKD 500
           + +    + +V+  N   T              E+   ++ Y+ +       GR      
Sbjct: 658 LKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVT 717

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A ++ +E  Q+GIA N  TY +L++G  K  +
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENR 749



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 270/583 (46%), Gaps = 78/583 (13%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TY+TI+D+L + G ++    L  +M+ +G+  +  TYN LV G CK G   +   ++
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 276

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M   + +P+V T+N+L++ +   G L+EA  L KEM +  + P+++TYNTL++ +   
Sbjct: 277 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 336

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  EA  ++D +  +   P+ VT   +IK YC   ++D   K+ RN+ + G   + VTY
Sbjct: 337 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 396

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           + L+   C++G ++ A  +   M   G+  + +T   +L  LC   KL++A  +     K
Sbjct: 397 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
               L  V Y T+I G  +  K   A  L+  +  + + P+  TY  MI GL + G   +
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI----VTCN 364
           A  +L ++ + G  P++ T+NT+I     +G +  + +   +M    F  D     +  +
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576

Query: 365 ILLSGL--------------CREGILE---------KALKFFRSW------------ILK 389
           +LLS +               R+ +LE          +L F + +             ++
Sbjct: 577 MLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIE 636

Query: 390 GKAVDSVTYNTLI-----SSLCKERRLEDAFGLLSE--------------MEEKKLGPDR 430
            + ++S   N  +     SS+ K+ +  D   L++               M + +L  D 
Sbjct: 637 ARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDA 696

Query: 431 YTYAAIHTALVESGRLEE-AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             YA  H A    GR+    +K T +  E  +++ +++Q         I P++I+YS  I
Sbjct: 697 VHYA--HRA----GRMRRPGRKMTVVTAE--ELHKEMIQRG-------IAPNTITYSSLI 741

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  C + R  +A Q+ +    KG     S    L+ GL+++++
Sbjct: 742 DGFCKENRLDEANQMLDLMVTKG----DSDIRYLLAGLMRKKR 780



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 20/278 (7%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D K + A+ L+ EM   + +PS   ++     ++++ +    +D   +L  +G+  +  T
Sbjct: 56  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 115

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            N +I+ FC   +   A     K+++  ++PD  T N L+ GL  EG + +A+      +
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   D VTYN++++ +C+      A  LL +MEE+ +  D +TY+ I  +L   G ++
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 448 EAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEK 488
            A      M ET  I   VV  N+                        EI P+ I+++  
Sbjct: 236 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++    +G+ ++A ++++E   +GI+ N  TY  LM+G
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 332


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 244/460 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   +  T N +++   +  K      +L  + K G  P+ TT+N L++G C    
Sbjct: 91  MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +V  M +N   P+V TYN ++NG C +G    A  L ++M+   +  DV TY+T
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+     G    A  L  E++  GIK + VT+N ++   CK GK +   +++++M    
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +T+N LID   K G ++EA  +   M  KG+  NTIT N+++   C + +L EA 
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+   +     D V++ +LI GY + ++ +  +KL+ ++ +R ++ +T TY+ ++ G 
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF 390

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            QSGK E A ++  E++  G++PD  T+  ++ G C  G++EKAL+    + +     DI
Sbjct: 391 CQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDI 450

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V   I++ G+C+ G +E A   F S   KG   + +TY  +IS LCK+  L +A  LL +
Sbjct: 451 VMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 510

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           MEE    P+  TY  +  A +  G L  + K    M   G
Sbjct: 511 MEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 550



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 243/513 (47%), Gaps = 17/513 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V ++     +    + N V D    M+  G+  N  T NI+++ +C+      A  
Sbjct: 62  LPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYS 121

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  + +    PD  T+N LING C    + EA  L   M      P+VVTYN+++N   
Sbjct: 122 VLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGIC 181

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +SG +  A  L+ ++DE  +K +  T++ +I   C++G ID A  + + ME  G     V
Sbjct: 182 KSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLV 241

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+L+   CKAG   +  +++  M  + +  N IT N ++     E KL EA  L    
Sbjct: 242 TYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEM 301

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   + ++Y +L+ GY    + + A  + D M      P   T+ ++I G  +  + 
Sbjct: 302 ITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRV 361

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++ + +  ++ + G++ +  T++ ++ GFC  G++E A +   +MV     PD++T  IL
Sbjct: 362 DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGIL 421

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLC  G LEKAL+ F         +D V Y  +I  +CK  ++EDA+ L   +  K +
Sbjct: 422 LDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGV 481

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+  TY  + + L + G L EA      M E G                  +P+  +Y+
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN-----------------EPNDCTYN 524

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             I  H   G    + ++ EE +  G + + S+
Sbjct: 525 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 557



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 243/475 (51%), Gaps = 18/475 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ +   M +++ LP +  ++   +G  +           K+ME   +  ++ T N +I
Sbjct: 48  DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F    ++  A+ ++ ++ + G +P+  T N +I   C E K+ +A  +V  M ENG  
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQ 167

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ VTYN++++  CK+G+   A  ++  M  + +K +  T +TI+ +LC +  +D A  L
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISL 227

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                 +G     V+Y +L+ G  +  K N  ++L  +M  R+I+P+  T+N +I    +
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVK 287

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK ++A ++  E++  G+ P+  T+N+++ G+C + ++ +A    + MV  +  PDIVT
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVT 347

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ G C+   +++ +K FR    +G   ++VTY+ L+   C+  +LE A  L  EM 
Sbjct: 348 FTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              + PD  TY  +   L ++G+LE+A +    + +  K+N  +V               
Sbjct: 408 SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMNLDIVM-------------- 452

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
             Y+  I   C  G+ +DA  +F     KG+  N  TY  +++GL K + S+S+A
Sbjct: 453 --YTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEA 504



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 208/401 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYN+I++ + K G  +   DLL  M ++ +  +  TY+ ++   C+ G +  A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M        + TYN L+ G C AG   +  +L K+M S K++P+V+T+N LI+ 
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+  EA +L  E+   GI PN +T+N ++  YC + ++ +A  ++  M  N  SPD
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+ +LI   CK   ++E  ++   + ++GL  NT+T + ++   C   KL+ A  L  
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++YG L+ G   + K  +AL++++++++ ++      Y  +I G+ + G
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A ++   L   G+ P+  T+  +I G C +G + +A     KM E   +P+  T N
Sbjct: 465 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYN 524

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            L+    R+G L  + K        G + D+ +   +I  L
Sbjct: 525 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 170/332 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G     VTYN+++  L K GK N+   LL DM  + ++PN  T+N+L+  + K G 
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  +   M      P+  TYN L++G+C    L EA  +   M      PD+VT+ +
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + +  R  E  KL  ++ + G+  N VT++I+++ +C+ GK++ A ++ + M   G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY  L+D  C  G +E+A  + + + +  + ++ +    I+  +C   K+++A+
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S   +G   + ++Y  +I+G  +    + A  L  +M+E    P+  TYN +I   
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH 530

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            + G    +  ++ E+   G   D ++   +I
Sbjct: 531 LRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 267/520 (51%), Gaps = 17/520 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T+  ++  L  +G++ +  ++L +M  +G  P    Y++++   C+ G  + ++RV
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M       D    N+++N  C  G ++EA  L +++       D+V+YN ++     
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +L+DE+      PN VT N +I + C+ G  ++  +++  M E+G +PD   
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G++E A  +++ M   GLK N +  NT+L  LC  ++  EA  LL+   
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++   LD+V++  L+  + ++   +R ++L ++M     MP   TY  +I G  + G  +
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G CS G+   A +  ++M+++   P+ VT N L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++E+A++  +  ++ G + D ++Y+T+I  L K  + E+A  LL+ M  K + 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+   Y++I  AL   GR+                 ++V+Q   +     I   ++ Y+ 
Sbjct: 529 PNTIIYSSIACALSREGRV-----------------NKVIQMFDNIKDTTIRSDAVLYNA 571

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            I+  C +     A+  F      G   N+STY  L+ GL
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 222/418 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC  D V+YN +L  L    +  +V +L+ +M +    PN  T+N L+   C+ G  + 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              V+  M+++   PD+  Y  +I+G C  G LE A  +   M S  L P+VV YNT++ 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + R  EA +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M  +G  P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY T+I+  CK G ++EA  ++  M   G K NT++   +L  LC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   ++G   + V++ TLI    +     +A++L  +M      P   +Y+ +I GL ++
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GKTE+A+++LN ++  G+ P+   +++I      EG+V K +Q  + + + + + D V  
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           N ++S LC+    ++A+ FF   +  G   +  TY  LI  L  E   ++A  LLSE+
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 230/468 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  D    N +L+A+ ++G ++E   LL  +   G   +  +YN ++ G C    
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   ++D M +    P++ T+N LI   C  G+ E    +  +M      PD+  Y T
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G    A ++++ +  +G+KPN V +N ++K  C   +  +A +++  M +  
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL S S  G   + VSY  ++ G     +   A +L  +M ++   P+  T+N +I  L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  EQAI++L ++L +G  PD  +++T+I G    G+ E+AL+  N MV K   P+ 
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  + +   L REG + K ++ F +        D+V YN +ISSLCK    + A    + 
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L   G  +EAQ+  S +   G +   +++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMR 639



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 246/508 (48%), Gaps = 17/508 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+ IL+A  + G       +L  M  +G   +    N++++  C+ G + EA
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +       D+ +YN ++ G C A    +   L  EM  +   P++VT+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G      +++ ++ EHG  P+   +  +I   CKEG ++ A +I+  M   G  P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V YNT++   C A   +EA  ++  M +K   ++ +T N ++   C    +D    LL 
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 380

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL  +G
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A +++++++Q G  P+  TFNT+I+  C +G VE+A++   +M+     PD+++ +
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL + G  E+AL+     + KG + +++ Y+++  +L +E R+     +   +++ 
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  D   Y A+ ++L +    + A  F + MV  G        PN S           +
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG------CMPNES-----------T 603

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKG 512
           Y+  I    S+G  K+A ++  E   +G
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 197/416 (47%), Gaps = 20/416 (4%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VV YN ++  +  +G+   A +L   +    + PNA T   +++  C  G+I  A +++ 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M   G +P    Y+ +++A C++G    + R+++ M  KG  ++T   N +L+ +C + 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            +DEA  LL   +  G   D VSY  ++ G    ++     +L DEM      P+  T+N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I  L ++G  E+  ++L ++ + G  PD   + TII G C EG +E A +  N+M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KP++V  N +L GLC     ++A +       K   +D VT+N L+   C+   ++  
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL +M      PD  TY  +     + G ++EA      M   G       +PNT   
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNT--- 426

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                   +SY+  +   CS GR+ DA ++  +  Q+G   N  T+  L+N L K+
Sbjct: 427 --------VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/429 (32%), Positives = 223/429 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VT+NT++D+  K+G++    ++L  M+  G  PN  +YN+LV+G    G    A  +
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKEL 264

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M+         TYN LI G+C   M EEA  LR+EM     LP VVTYNT++     
Sbjct: 265 IEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR 324

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A + +D +    + P+ V++N +I  Y + G   +A  +   +      P  VT
Sbjct: 325 LGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVT 384

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLID  C+ GN++ A  M D M + GL  + +T   ++   C    L  A  L +   
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   D ++Y T I G  +    ++A  + +EMK     P   TYN +I GL + G  +
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A +++ ++   G++PD  T+ +IIH     G + KA +  + M++K   P +VT  +L+
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                 G L+ A K+F     KG + + +TYN LI  LCKE  ++ A+ L +EME K + 
Sbjct: 565 HSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVS 624

Query: 428 PDRYTYAAI 436
           P++YTY  +
Sbjct: 625 PNKYTYTIL 633



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 239/481 (49%), Gaps = 17/481 (3%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           ++L+  + K   L++ + V   M  N  LPDV   N ++    +  M+ E   +   M  
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
            ++ P +VT+NT+++   + G    A +++D +   G  PN V++N+++     +G+ D+
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +++  M   G      TYN LI   CK    EEA  +   M  +G     +T NTI++
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           +LC   ++ +A   L+         D VSY TLI GY R      AL L+ E++ + ++P
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVP 380

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S  TYN +I G  ++G  + A  M +++++ G+ PD  TF  ++ GFC  G +  A +  
Sbjct: 381 SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELF 440

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M+ +  KPD +     + G  + G   KA         +G   D +TYN LI+ LCK 
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
              +DA  L+ +M  + + PD  TY +I  A + SG L +A++  S M++ G        
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKG-------- 552

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    I PS ++Y+  I+ +  +GR   A + F+E + KG++ N  TY  L+ GL 
Sbjct: 553 ---------IHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLC 603

Query: 529 K 529
           K
Sbjct: 604 K 604



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 216/446 (48%), Gaps = 35/446 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK--- 57
           M  FGC P++V+YN +++ L  KG+ +  ++L+  M   GL  +  TYN L+ G+CK   
Sbjct: 233 MRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEM 292

Query: 58  --------------------------------LGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                           LG + +A R +D+M     +PD+ +YN 
Sbjct: 293 FEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNT 352

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI G+   G   EA  L  E+ S  L+P VVTYNTLI+    +G    A  + D++ +HG
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+ VT  I+++ +C+ G +  A ++   M   G  PDC+ Y T I    K GN  +AF
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            M + M  +G   + IT N +++ LC     D+A  L+      G   D V+Y ++I  +
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                  +A +++ +M ++ I PS  TY  +I   +  G+ + A    +E+   G+ P+ 
Sbjct: 533 LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNV 592

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N +I+G C E  ++ A     +M  K   P+  T  IL++        + ALK ++ 
Sbjct: 593 ITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKD 652

Query: 386 WILKGKAVDSVTYNTLISSLCKERRL 411
            + +    DS T++ L+  L K+ +L
Sbjct: 653 MLDREIKPDSCTHSALMKHLSKDYKL 678



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 175/343 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V+YNT++    + G   E   L S+++ + LVP+  TYN L+ G C+ G L  A  
Sbjct: 344 MPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKG 403

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M ++   PDV T+ +L+ G+C  G L  A  L  EM S  L PD + Y T I    
Sbjct: 404 MKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL 463

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   +AF + +E+   G  P+ +T+N++I   CK G  D A ++V+ M   G  PD V
Sbjct: 464 KLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHV 523

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY ++I A+  +G + +A  +   M +KG+  + +T   ++H+     +LD A    +  
Sbjct: 524 TYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEM 583

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   + ++Y  LI G  ++   + A  L+ EM+ + + P+ +TY  +I   S     
Sbjct: 584 QDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYW 643

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           + A+ +  ++L   + PD  T + ++     + ++   L+  N
Sbjct: 644 QDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 239/450 (53%), Gaps = 5/450 (1%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PDN T   ++ +L    ++++ R+L+ +M  +G+  N  TY+ LV G CK   L EA+ 
Sbjct: 71  VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 130

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +V+ M +    P V TYN +I G+C A  ++EA    ++M +    PD++TY  LI  F 
Sbjct: 131 LVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFC 190

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +S       +L+ E+   G  P+ VT++ +I   CK G++  A  I    EE   +P  +
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI---FEEMSCAPTAI 247

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+LI   C+AG+M+EA R++  M       + +T  T++   C   +LD+AY L    
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                  D V++ +L+ G   + +   AL+L +E+  R   P+ +TYN ++ G  ++ + 
Sbjct: 308 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQV 367

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM-VEKSFKP-DIVTCN 364
            +A +++ +    G +P+  T+N ++ G C  G+ ++ALQ+ +++  E    P  +    
Sbjct: 368 RKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYA 427

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+L  LCR+G  + A++F+   I +G    + T+ T++ +LCK  + + A  LL EM + 
Sbjct: 428 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKY 487

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
              P   T  A+ +A   +G +++A +  S
Sbjct: 488 GHTPGPGTCDAVVSAYCRAGMIQKADELAS 517



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 246/491 (50%), Gaps = 21/491 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P    +N+++ G C+ G L+ A+ V   M  +   PD  TY  L++G   A  L +A ++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
            +EM S + +PD  T   ++       R  +A +L++E+   G+  NA+T++ ++   CK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
             ++D+A  +V  M E G +P  VTYN++I   C+A  ++EA   M+ M  +G   + IT
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
              ++   C  + +     LL   ++RG+  D V+Y T+I G  +  +   A+ +++EM 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
                P+  TYN++I G  ++G  ++AI +L +++     PD  T+ T++  FC  G+++
Sbjct: 242 ---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A +   +MV     PD+VT   L+ GLC EG +E AL+       +G      TYN ++
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              CK  ++  A  L+++   +   P+  TY  +      +GR ++A ++          
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD-------- 410

Query: 463 NHQVVQPNTSKTPEEIDPSSIS-YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                Q N+   P    P+S++ Y+  ++  C  GR  DA+Q +EE  Q+G     +T+ 
Sbjct: 411 -----QLNSEGGPC---PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462

Query: 522 NLMNGLIKRRK 532
            ++  L K  +
Sbjct: 463 TVVFALCKAHQ 473



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 231/455 (50%), Gaps = 5/455 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TY  ++  L K  +L +   +L +M     VP+ TT  ++V   C    + +A  +
Sbjct: 37  PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M       +  TY+ L++G C    L+EA  L + M      P VVTYN++I  F  
Sbjct: 97  VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  EA   ++++   G  P+ +T+  +I  +CK   + +  +++  +   GF+PD VT
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+T+ID  CKAG + +A   +D+          IT N+++   C    +DEA  LL    
Sbjct: 217 YSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 273

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 D V+Y TL++ + +  + + A +L+ +M   ++ P   T+ +++ GL   G+ E
Sbjct: 274 DDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 333

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++L E+ + G  P   T+N ++ G+C   QV KA +       + F P+ VT NIL+
Sbjct: 334 DALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILV 393

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDS--VTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +G CR G  ++AL++      +G    +    Y  ++ +LC++ R +DA     EM ++ 
Sbjct: 394 AGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 453

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             P   T+A +  AL ++ + ++A +    M++ G
Sbjct: 454 YVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 488



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 225/419 (53%), Gaps = 5/419 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   + +TY+ ++D L K  +L+E   L+  M ++G  P   TYN +++G+C+   + EA
Sbjct: 104 GMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEA 163

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              ++ M      PD+ TY  LI G+C +  +     L  E+      PD+VTY+T+I+ 
Sbjct: 164 HGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDG 223

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR  +A   +D  +E    P A+T+N +I  YC+ G +D+A +++  M ++  +PD
Sbjct: 224 LCKAGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TL+ A CK G +++A+ +   M    L  + +T  +++  LC E ++++A  LL 
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++RG      +Y  ++ GY +  +  +A +L  + + R  +P+T TYN ++ G  ++G
Sbjct: 341 EITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 400

Query: 305 KTEQAIDMLNEL-LQSGMIPDETT-FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +T+QA+  L++L  + G  P     +  I+   C +G+ + A+QF+ +M+++ + P   T
Sbjct: 401 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 460

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
              ++  LC+    ++A +     I  G      T + ++S+ C+   ++ A  L SE+
Sbjct: 461 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 40/315 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+T++D L K G+L +  D+  +M      P   TYN L+ GYC+ G + EA
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEA 265

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R++  M  +K  PDV TY  L++ +C  G L++A+ L ++M + KL PDVVT+ +L++ 
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325

Query: 125 FFESGRSMEAFKLIDELDEHGIKP-----------------------------------N 149
               GR  +A +L++E+   G  P                                   N
Sbjct: 326 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN 385

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVT-YNTLIDANCKAGNMEEAFRM 207
            VT+NI++   C+ G+ D+A + +  +  E G  P  V  Y  ++DA C+ G  ++A + 
Sbjct: 386 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 445

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            + M ++G      T  T++  LC   +  +A+ LL    K G+     +   +++ Y R
Sbjct: 446 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 505

Query: 268 DEKANRALKLWDEMK 282
                +A +L  E++
Sbjct: 506 AGMIQKADELASELR 520



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 18/211 (8%)

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           M P     N +I G C  G++  AL  + +M   +  PD +T   L+ GL +   L  A+
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +  +  +      D+ T   ++ SLC   R++DA  L+ EM  + +  +  TY+A+   L
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            +  RL+EA      M E G                   P+ ++Y+  I   C   R  +
Sbjct: 120 CKCERLDEAVALVETMAERG-----------------CAPTVVTYNSIITGFCRARRVDE 162

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           A    E+   +G   +  TY  L+ G  K R
Sbjct: 163 AHGFMEQMVAEGCHPDIITYTALIGGFCKSR 193


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 269/572 (47%), Gaps = 35/572 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F   P    YNTIL AL   G +     L + M   G  PNR TYN+L+ G CK G 
Sbjct: 163 MDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGM 222

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+++ D M     +P+V  Y +L++  CNAG ++EA +L   M+    LPD VTYN 
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            ++   + GR  EAF+ +  L + G       ++ +I    +  + D+     + M E  
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD V Y  +I    +AG +E+A   +DVM +KG   +T   NT+L  LC    L+ A+
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   +    LD  +   +I G  +    + A++++DEM E    P+  TYNA+I G 
Sbjct: 403 TLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462

Query: 301 SQSGKTEQAIDMLNEL-------------LQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            + G+ E+A  + +++             L +  + D  +   ++H  C  GQV KA + 
Sbjct: 463 YREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              +++    PD+VT N L++GLC+   L+ A++ F+   LKG + D +TY TLI  L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV- 466
             R  DA  L   + +    P    Y ++  +L    +L +A       +   K N  V 
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK-KYNFPVE 641

Query: 467 --VQPNTSKTPEE------------IDP-----SSISYSEKINEHCSQGRYKDALQIFEE 507
             V  N  K  E+            ID      SS  Y+  +   C   R  DAL+IF  
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHT 701

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++ GI I  +    L+N L   R +++ AVD
Sbjct: 702 LQEFGIDITPACCALLINYLCWDR-NLNAAVD 732



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 224/478 (46%), Gaps = 48/478 (10%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D L+D +  GL  + + +  LV+ +   G   +A++    M + +S P  + YN ++   
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
            ++G++  A  L   M +    P+  TYN L++   + G + +A K+ DE+ + GI PN 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             + +++   C  GKID+A +++ +M++ G  PD VTYN  +   CK G + EAF+ + +
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVM 302

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +   G  +     + ++  L   ++ DE +    +  +R    D V Y  +I G     +
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              AL   D MK++  +P TF YN ++  L   G  E+A  + +E+LQ+ ++ D TT   
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE------------- 377
           +I G C  G V++A+Q  ++M E    P ++T N L+ G  REG LE             
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482

Query: 378 -----------------------------------KALKFFRSWILKGKAVDSVTYNTLI 402
                                              KA K  RS I  G   D VTYNTLI
Sbjct: 483 NPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           + LCK R L+ A  L  E++ K + PD  TY  +   L+ + R  +A      ++++G
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 208/468 (44%), Gaps = 51/468 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLPD VTYN  L  L K G++NE    L  ++  G       Y+ L+ G  +   
Sbjct: 268 MKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARR 327

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E       M +    PDV  Y ++I G   AG +E+A      M+    +PD   YNT
Sbjct: 328 FDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNT 387

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++    + G    A  L  E+ ++ +  ++ T  IMI   CK G +D+A +I   M E+G
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG 447

Query: 181 FSPDCVTYNTLIDANCKAGNMEEA---FRMMDVMG-------RKGLKMNTI----TLNTI 226
             P  +TYN LID   + G +EEA   F  M+ MG       R  L  N +    +L  +
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFLRLTLGANQVRDSESLRKL 506

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +H +C   ++ +AY LL S    G   D V+Y TLI G  +    + A++L+ E++ + I
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P   TY  +I GL ++ +   A+ +   +LQSG  P  + +N+++   C   ++ +A+ 
Sbjct: 567 SPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626

Query: 347 F---------------------HNKMVEKSFKPDI------------VTCN---ILLSGL 370
                                 H ++ + S    +            ++ N   I L GL
Sbjct: 627 LWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGL 686

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           C+    + AL+ F +    G  +       LI+ LC +R L  A  ++
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           S   E   D L +   +G+    + F  ++    S G+   A+Q  ++M E   +P    
Sbjct: 115 SHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFV 174

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N +L  L   G++  AL  +   +  G A +  TYN L+  LCK+    DA  +  EM 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++ + P+   Y  + ++L  +G+++EA +    M + G +                 P  
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL-----------------PDE 277

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++Y+  ++  C  GR  +A Q     +  G A+    Y  L++GL + R+
Sbjct: 278 VTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARR 327


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 269/572 (47%), Gaps = 35/572 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F   P    YNTIL AL   G +     L + M   G  PNR TYN+L+ G CK G 
Sbjct: 163 MDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGM 222

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+++ D M     +P+V  Y +L++  CNAG ++EA +L   M+    LPD VTYN 
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            ++   + GR  EAF+ +  L + G       ++ +I    +  + D+     + M E  
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD V Y  +I    +AG +E+A   +DVM +KG   +T   NT+L  LC    L+ A+
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   +    LD  +   +I G  +    + A++++DEM E    P+  TYNA+I G 
Sbjct: 403 TLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462

Query: 301 SQSGKTEQAIDMLNEL-------------LQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            + G+ E+A  + +++             L +  + D  +   ++H  C  GQV KA + 
Sbjct: 463 YREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              +++    PD+VT N L++GLC+   L+ A++ F+   LKG + D +TY TLI  L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV- 466
             R  DA  L   + +    P    Y ++  +L    +L +A       +   K N  V 
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK-KYNFPVE 641

Query: 467 --VQPNTSKTPEE------------IDP-----SSISYSEKINEHCSQGRYKDALQIFEE 507
             V  N  K  E+            ID      SS  Y+  +   C   R  DAL+IF  
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHT 701

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++ GI I  +    L+N L   R +++ AVD
Sbjct: 702 LQEFGIDITPACCALLINYLCWDR-NLNAAVD 732



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 224/479 (46%), Gaps = 48/479 (10%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D L+D +  GL  + + +  LV+ +   G   +A++    M + +S P  + YN ++   
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
            ++G++  A  L   M +    P+  TYN L++   + G + +A K+ DE+ + GI PN 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             + +++   C  GKID+A +++ +M++ G  PD VTYN  +   CK G + EAF+ + +
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVM 302

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +   G  +     + ++  L   ++ DE +    +  +R    D V Y  +I G     +
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              AL   D MK++  +P TF YN ++  L   G  E+A  + +E+LQ+ ++ D TT   
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE------------- 377
           +I G C  G V++A+Q  ++M E    P ++T N L+ G  REG LE             
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482

Query: 378 -----------------------------------KALKFFRSWILKGKAVDSVTYNTLI 402
                                              KA K  RS I  G   D VTYNTLI
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           + LCK R L+ A  L  E++ K + PD  TY  +   L+ + R  +A      ++++G 
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 208/468 (44%), Gaps = 51/468 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLPD VTYN  L  L K G++NE    L  ++  G       Y+ L+ G  +   
Sbjct: 268 MKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARR 327

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E       M +    PDV  Y ++I G   AG +E+A      M+    +PD   YNT
Sbjct: 328 FDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNT 387

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++    + G    A  L  E+ ++ +  ++ T  IMI   CK G +D+A +I   M E+G
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG 447

Query: 181 FSPDCVTYNTLIDANCKAGNMEEA---FRMMDVMG-------RKGLKMNTI----TLNTI 226
             P  +TYN LID   + G +EEA   F  M+ MG       R  L  N +    +L  +
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFLRLTLGANQVCDSESLRKL 506

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +H +C   ++ +AY LL S    G   D V+Y TLI G  +    + A++L+ E++ + I
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P   TY  +I GL ++ +   A+ +   +LQSG  P  + +N+++   C   ++ +A+ 
Sbjct: 567 SPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626

Query: 347 F---------------------HNKMVEKSFKPDI------------VTCN---ILLSGL 370
                                 H ++ + S    +            ++ N   I L GL
Sbjct: 627 LWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGL 686

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           C+    + AL+ F +    G  +       LI+ LC +R L  A  ++
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           S   E   D L +   +G+    + F  ++    S G+   A+Q  ++M E   +P    
Sbjct: 115 SHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFV 174

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N +L  L   G++  AL  +   +  G A +  TYN L+  LCK+    DA  +  EM 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++ + P+   Y  + ++L  +G+++EA +    M + G +                 P  
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL-----------------PDE 277

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++Y+  ++  C  GR  +A Q     +  G A+    Y  L++GL + R+
Sbjct: 278 VTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARR 327


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 250/474 (52%), Gaps = 20/474 (4%)

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYN 119
           ++A  V D + + + +PDV++YN+L+NG C+    +EA  L   M  +     PDVV+Y+
Sbjct: 34  EDARHVFDELLR-RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN FF+ G   + +   +E+ +  I PN VT+N +I   CK   +DKA +++  M ++
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PDC+TYN+++   C +G  +EA   +  M   G++ + +T N+++  LC   +  EA
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +S +KRG   +  +YGTL+ GY           L D M    I P+ + ++ ++  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            ++  K E+A+ + +++ Q G+ P+  T+  +I   C  G+VE A+ +  +M+++   P 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +  N L+ GLC     E+A +     + +G  ++++ +N++I S CKE R+ ++  L  
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M    + PD  TY+ +      +G+++EA K  + MV  G                 + 
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG-----------------MK 435

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           P  ++YS  IN +C   R KDAL +F E    G++ +  TY  ++ GL + R++
Sbjct: 436 PDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 489



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 152/571 (26%), Positives = 278/571 (48%), Gaps = 53/571 (9%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y+T+++  FK+G L++     ++M  Q + PN  TYN +++  CK   +
Sbjct: 80  DGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTV 139

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +AM V+  M ++  +PD  TYN +++G+C++G  +EA    K+M S  + PDVVTYN+L
Sbjct: 140 DKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSL 199

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           ++   ++GR  EA K+ D + + G+KP   T+                            
Sbjct: 200 MDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 259

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  +I++  Y K+ K+++A  +   M + G +P+ VTY  +I   CK+G +E+A  
Sbjct: 260 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 319

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             + M  +GL    I  N+++H LC   K + A  L+     RG  L+ + + ++I  + 
Sbjct: 320 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 379

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ +   + KL+D M    + P   TY+ +I G   +GK ++A  +L  ++  GM PD  
Sbjct: 380 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T++T+I+G+C   +++ AL    +M      PDI+T NI+L GL +      A + +   
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
              G+ ++  TYN ++  LCK +  +DA  +   +    L  +  T+  +  AL++ GR 
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +EA+         G +                 P+  +Y         QG  ++  Q+F 
Sbjct: 560 DEAKDLFVAFSSNGLV-----------------PNYWTYRLMAENIIGQGLLEELDQLFL 602

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
                G  ++ S  +N +   + +R  I++A
Sbjct: 603 SMEDNGCTVD-SGMLNFIVRELLQRGEITRA 632



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 270/525 (51%), Gaps = 19/525 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWLKEA 64
           +PD  +YN +L+ L  + +  E  +LL  M   G    P+  +Y+ +++G+ K G L + 
Sbjct: 48  IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT 107

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + M   +  P+V TYN +I   C A  +++A  +   M    ++PD +TYN++++ 
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SG+  EA   + ++   G++P+ VT+N ++ + CK G+  +A KI  +M + G  P+
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TL+      G + E   ++D+M R G+  N    + ++     ++K++EA ++ +
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + V+YG +I    +  +   A+  +++M +  + P    YN++I GL    
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+A +++ E+L  G+  +   FN+II   C EG+V ++ +  + MV    KPDI+T +
Sbjct: 348 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 407

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G +++A K   S +  G   D VTY+TLI+  CK  R++DA  L  EME  
Sbjct: 408 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESS 467

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  TY  I   L ++ R   A++    + ++G+               +++ S  +
Sbjct: 468 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR---------------QLELS--T 510

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  ++  C      DAL++F+      + +   T+  +++ L+K
Sbjct: 511 YNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 555



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 234/458 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P  TTY  L+ GY   G 
Sbjct: 184 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 243

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   P+ + +++L+  +     +EEA  +  +M    L P+ VTY  
Sbjct: 244 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SGR  +A    +++ + G+ P  + +N +I   C   K ++A +++  M + G
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 363

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + +N++ID++CK G + E+ ++ D+M R G+K + IT +T++   C   K+DEA 
Sbjct: 364 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 423

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL
Sbjct: 424 KLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +T  A ++   + +SG   + +T+N I+HG C     + AL+    +     K + 
Sbjct: 484 FQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 543

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F ++   G   +  TY  +  ++  +  LE+   L   
Sbjct: 544 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 603

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           ME+     D      I   L++ G +  A  + S++ E
Sbjct: 604 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 641



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 176/369 (47%), Gaps = 5/369 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG-WLKE 63
           G  P+ VTY  ++  L K G++ +       M  +GL P    YN L+ G C    W + 
Sbjct: 293 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 352

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              +++++ +   L  ++ +N +I+  C  G + E+ +L   M  + + PD++TY+TLI+
Sbjct: 353 EELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 411

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +  +G+  EA KL+  +   G+KP+ VT++ +I  YCK  ++  A  + R ME +G SP
Sbjct: 412 GYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSP 471

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TYN ++    +      A  +   + + G ++   T N ILH LC  K  D+A  + 
Sbjct: 472 DIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMF 531

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            +       L+  ++  +I    +  + + A  L+       ++P+ +TY  M   +   
Sbjct: 532 QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 591

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+   +   +  +G   D    N I+      G++ +A  + + + EK F  +  T 
Sbjct: 592 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTA 651

Query: 364 NI---LLSG 369
           ++   LLSG
Sbjct: 652 SLFIDLLSG 660



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 114/230 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY+T+++   K  ++ +   L  +M+  G+ P+  TYNI++ G  +   
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   +T++    ++ TYN++++G C   + ++A R+ + +  + L  +  T+N 
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + GR+ EA  L      +G+ PN  T+ +M +    +G +++  ++  +ME+NG
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + D    N ++    + G +  A   + ++  K   +   T +  +  L
Sbjct: 609 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 658


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 167/548 (30%), Positives = 262/548 (47%), Gaps = 44/548 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            PD  T+N +L AL +KG + E   LL+ + K+G+  N+ T NI + G C+ G L+EA+ 
Sbjct: 112 FPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVA 171

Query: 67  VV---------DLMTQNK-------------------------SLPDVWTYNMLINGWCN 92
           +V         D++T N                           +PD +TYN +I+G+C 
Sbjct: 172 LVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK 231

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
             ML+EA  L K+      +PD VTY +LIN     G    A +L +E     +KP+ V 
Sbjct: 232 RDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVV 291

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N ++K  C++G I  A +++  M E+G  PD  TYN +I+  CK GN+ +A  +M+   
Sbjct: 292 YNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            KG   +  T NT++   C   KLD A  L+      G   D ++Y +++ G  +  KA 
Sbjct: 352 VKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
              + ++EM  +   P+  TYN +I    +  + E+A  ++  + Q G++PD  +FNT+I
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HGFC  G ++ A     K+ EK +     T NIL+     +  ++ A K F   I KG  
Sbjct: 472 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 531

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D  TY  L+   CK   ++ A+  L+EM  K   P   T+  +  +L  + R+ EA   
Sbjct: 532 PDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAI 591

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE-HCSQGRYKDALQIFEETRQK 511
             IMV  G +  +VV    S   +EI    I   E + + H S   Y        E   +
Sbjct: 592 IHIMVRMGVVP-EVVDTILSTDKKEIAAPKILVEELMKKGHISYPTY--------EVLHE 642

Query: 512 GIAINKST 519
           G+  NK T
Sbjct: 643 GVRDNKLT 650



 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 257/526 (48%), Gaps = 19/526 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FGC P    YN I+DAL      ++   +   M   G+ P+  T+ + +  +C  G 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R++  + +         Y  ++ G    G   +A  L  EM    + PDV T+N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G  ME+  L+ ++ + G+  N  T NI I+  C+ G++++A  +V +M+   
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTYNTL+   CK   ++EA + +  M  +G   +  T NTI+   C    L EA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL  A  +G+  D V+Y +LI G   +    RAL+L++E + + + P    YN+++ GL
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G    A+ ++NE+++ G  PD  T+N +I+G C  G +  A    N  + K + PD+
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N ++ G C+   L+ AL+      + G A D++TYN++++ LCK  + ++      E
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K   P+  TY  +     +  +LEEA      M + G +                 P
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV-----------------P 462

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            +IS++  I+  C  G    A  +F++  +KG +    T+ N++ G
Sbjct: 463 DTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTF-NILIG 507



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 142/275 (51%), Gaps = 6/275 (2%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  PD +TYN++L+ L K GK  EV +   +M  +G  PN  TYNIL+  +CK+  L+E
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 447

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  V+  M+Q+  +PD  ++N LI+G+C  G L+ A+ L ++++         T+N LI 
Sbjct: 448 ASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 507

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +        A K+  E+   G KP+  T+ +++   CK   +D+A   +  M   GF P
Sbjct: 508 AYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVP 567

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              T+  ++++      + EA  ++ +M R G+    +  +TIL T   +K++    +L+
Sbjct: 568 SMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTD--KKEIAAPKILV 623

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
               K+G ++   +Y  L  G  RD K  R  + W
Sbjct: 624 EELMKKG-HISYPTYEVLHEG-VRDNKLTRKARKW 656


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 165/572 (28%), Positives = 267/572 (46%), Gaps = 35/572 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F   P    YNTIL AL   G +     L + M   G  PNR TYN+L+ G CK G 
Sbjct: 163 MDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGM 222

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+++ D M     +P+V  Y +L++  CNAG ++EA +L   M+    LPD VTYN 
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            ++   + GR  EAF+ +  L + G       ++ +I    +  + D+     + M E  
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD V Y  +I    +AG +E+A   +DVM +KG   +T   NT+L  LC    L+ A+
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   +    LD  +   +I G  +    + A++++DEM E    P+  TYNA+I G 
Sbjct: 403 TLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462

Query: 301 SQSGKTEQAIDMLNEL-------------LQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            + G+ E+A  + +++             L +  + D  +   ++H  C  GQV KA + 
Sbjct: 463 YREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              +++    PD+VT N L++GLC+   L+ A++ F+   LKG + D +TY TLI  L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             R  DA  L   + +    P    Y ++  +L    +L +A       +   K N  V 
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK-KYNFPVE 641

Query: 468 QPNTSKTPEEIDPSSI--------------------SYSEKINEHCSQGRYKDALQIFEE 507
               +   +EI+  S+                     Y+  +   C   R  DAL+IF  
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHT 701

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++ GI I  +    L+N L   R +++ AVD
Sbjct: 702 LQEFGIDITPACCALLINYLCWDR-NLNAAVD 732



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 224/478 (46%), Gaps = 48/478 (10%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D L+D +  GL  + + +  LV+ +   G   +A++    M + +S P  + YN ++   
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
            ++G++  A  L   M +    P+  TYN L++   + G + +A K+ DE+ + GI PN 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             + +++   C  GKID+A +++ +M++ G  PD VTYN  +   CK G + EAF+ + +
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVM 302

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +   G  +     + ++  L   ++ DE +    +  +R    D V Y  +I G     +
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              AL   D MK++  +P TF YN ++  L   G  E+A  + +E+LQ+ ++ D TT   
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE------------- 377
           +I G C  G V++A+Q  ++M E    P ++T N L+ G  REG LE             
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482

Query: 378 -----------------------------------KALKFFRSWILKGKAVDSVTYNTLI 402
                                              KA K  RS I  G   D VTYNTLI
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           + LCK R L+ A  L  E++ K + PD  TY  +   L+ + R  +A      ++++G
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 208/468 (44%), Gaps = 51/468 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLPD VTYN  L  L K G++NE    L  ++  G       Y+ L+ G  +   
Sbjct: 268 MKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARR 327

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E       M +    PDV  Y ++I G   AG +E+A      M+    +PD   YNT
Sbjct: 328 FDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNT 387

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++    + G    A  L  E+ ++ +  ++ T  IMI   CK G +D+A +I   M E+G
Sbjct: 388 VLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG 447

Query: 181 FSPDCVTYNTLIDANCKAGNMEEA---FRMMDVMG-------RKGLKMNTI----TLNTI 226
             P  +TYN LID   + G +EEA   F  M+ MG       R  L  N +    +L  +
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFLRLTLGANQVCDSESLRKL 506

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +H +C   ++ +AY LL S    G   D V+Y TLI G  +    + A++L+ E++ + I
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P   TY  +I GL ++ +   A+ +   +LQSG  P  + +N+++   C   ++ +A+ 
Sbjct: 567 SPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626

Query: 347 F---------------------HNKMVEKSFKPDI------------VTCN---ILLSGL 370
                                 H ++ + S    +            ++ N   I L GL
Sbjct: 627 LWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGL 686

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           C+    + AL+ F +    G  +       LI+ LC +R L  A  ++
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           S   E   D L +   +G+    + F  ++    S G+   A+Q  ++M E   +P    
Sbjct: 115 SHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFV 174

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N +L  L   G++  AL  +   +  G A +  TYN L+  LCK+    DA  +  EM 
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++ + P+   Y  + ++L  +G+++EA +    M + G +                 P  
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL-----------------PDE 277

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++Y+  ++  C  GR  +A Q     +  G A+    Y  L++GL + R+
Sbjct: 278 VTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARR 327


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 233/430 (54%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P++VT++T+L+ L  K K+ +   L  +M K G  P+  TY+ +++G CK+G    
Sbjct: 41  LGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTM 100

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++  M +    P+V  Y+ +I+  C   ++ EA     EM +  + P+VVTY+++++
Sbjct: 101 AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILH 160

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   GRS EA  L  ++ E  + P+ VT NI++    KEG I +A  +   M E G  P
Sbjct: 161 GFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEP 220

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN L+D  C    M+EA ++ ++M RKG   +  + N ++   C   ++DEA  LL
Sbjct: 221 NVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLL 280

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S +    D V+Y TL+ G+ +D +   A KL +EM+   ++P   TY+ ++ GL + 
Sbjct: 281 AEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A ++L  + +S + P+   +  +I G C+ G++E A +  + +  K  +PD+VT 
Sbjct: 341 GHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTY 400

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +++SGL + G+  +A + FR   + G   +S TYN +I    +     +A  L+ EM  
Sbjct: 401 TVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVG 460

Query: 424 KKLGPDRYTY 433
           +    D  T+
Sbjct: 461 RGFSADSSTF 470



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 220/429 (51%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           +L +M K GL PN  T++ L++G      + +A+++ D M +    PDV TY+ +ING C
Sbjct: 34  VLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLC 93

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G    A +L K+ME     P+VV Y+T+I+   +     EA + + E+   GI PN V
Sbjct: 94  KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T++ ++  +C  G+ ++A  + + M E    PD VT+N L+D   K G + EA  + + M
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG++ N  T N ++   C + ++DEA  L N   ++G      SY  LI G+ +  + 
Sbjct: 214 IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A  L  EM  + + P T TY+ ++ G  Q G+ + A  +L E+   G++PD  T++ +
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           + G C +G +++A +    M E   +P+I    IL+ G+C  G LE A + F +  +KG 
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VTY  +IS L K     +A  L  +M      P+  TY  I    + +G    A +
Sbjct: 394 QPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453

Query: 452 FTSIMVETG 460
               MV  G
Sbjct: 454 LIEEMVGRG 462



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 229/454 (50%), Gaps = 19/454 (4%)

Query: 78  PDVWTYNMLINGWC--NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           PDV+T  +LIN +C  N      AF +   M  L L P+ VT++TL+N      + ++A 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           KL DE+ + G +P+ +T++ +I   CK G    A ++++ MEE G  P+ V Y+T+ID+ 
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK   + EA   +  M  +G+  N +T ++ILH  C   + +EA  L     +R    D 
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V++  L+ G  ++     A  +++ M E+ + P+  TYNA++ G     + ++A  + N 
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +++ G  P   ++N +I G C  G++++A     +M  K+  PD VT + L+ G C++G 
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
            + A K        G   D +TY+ ++  LCK+  L++AF LL  M+E K+ P+ + Y  
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   +   G+LE A++  S +   G                 I P  ++Y+  I+     
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKG-----------------IQPDVVTYTVMISGLLKG 410

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           G   +A ++F +    G   N  TY  ++ G ++
Sbjct: 411 GLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLR 444



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 201/394 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TY+TI++ L K G       LL  M+++G  PN   Y+ ++   CK   + EAM  
Sbjct: 80  PDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEF 139

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      P+V TY+ +++G+CN G   EA  L K+M    ++PD VT+N L++   +
Sbjct: 140 LSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK 199

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G  +EA  + + + E G++PN  T+N ++  YC + ++D+A K+   M   G +P   +
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI  +CK+G ++EA  ++  M  K L  +T+T +T++   C + +  +A  LL    
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D ++Y  ++ G  +    + A +L   M+E +I P+ F Y  +I G+   GK E
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLE 379

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++ + L   G+ PD  T+  +I G    G   +A +    M      P+  T N+++
Sbjct: 380 AARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVII 439

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
            G  R G    A +     + +G + DS T+  L
Sbjct: 440 QGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 195/366 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ V Y+TI+D+L K   + E  + LS+M  +G+ PN  TY+ ++ G+C LG 
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  +   M +   +PD  T+N+L++G    GM+ EA  + + M    + P+V TYN 
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +    +  EA KL + +   G  P+  ++NI+IK +CK G+ID+A  ++  M    
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY+TL+   C+ G  ++A ++++ M   GL  + +T + +L  LC +  LDEA+
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +  +     +   Y  LI G     K   A +L+  +  + I P   TY  MI GL
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G + +A ++  ++   G +P+  T+N II GF   G    A +   +MV + F  D 
Sbjct: 408 LKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADS 467

Query: 361 VTCNIL 366
            T  +L
Sbjct: 468 STFQML 473



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 190/357 (53%), Gaps = 19/357 (5%)

Query: 176 MEENGFSPDCVTYNTLIDANCKAGN--MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           M+ +   PD  T   LI+  C + +     AF ++  M + GL+ N +T +T+L+ L  +
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K+ +A  L +   K GY  D ++Y T+I G  +      A++L  +M+E+   P+   Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           + +I  L +     +A++ L+E++  G+ P+  T+++I+HGFC+ G+  +A     +MVE
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           ++  PD VT NIL+ GL +EG++ +A   F + I KG   +  TYN L+   C + ++++
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  L + M  K   P   +Y  +     +SGR++EA+   +      +++H+ + P+T  
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLA------EMSHKALTPDT-- 292

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                    ++YS  +   C  GR +DA ++ EE R  G+  +  TY  +++GL K+
Sbjct: 293 ---------VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 19/181 (10%)

Query: 355 SFKPDIVTCNILLSGLCREGI--LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           + +PD+ T  IL++  C         A     +    G   + VT++TL++ L  + ++ 
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           DA  L  EM +    PD  TY+ I   L + G    A +    M E G            
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG------------ 112

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                  P+ + YS  I+  C      +A++   E   +GI+ N  TY ++++G     +
Sbjct: 113 -----CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167

Query: 533 S 533
           S
Sbjct: 168 S 168


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 242/467 (51%), Gaps = 3/467 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN+++D L K  + +  ++L   MK     P+  TYN L+ G  + G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ AM +   M   +S  DV ++N+L+ G C AG +E A    ++M+  +  P+V+TY+ 
Sbjct: 61  LERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++ R  +A +L++ +   G  P+ +T+ I++   CKE K+  A +++R M + G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYN+L+   C+A  + +A  +M  M  +G   N +T  T++  LC   ++ +A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L     +G   D + Y  LI G  + ++ + ++ L        I P   TY+++I+GL
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S + ++A  +L  +   G  PD   ++T+I G C  G+V++A   +  M       D+
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + L+ GLC+ G +++A       +  G    ++TYN+LI  LC    L++A  L+ E
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQ-KFTSIMVETGKINHQV 466
           ME     P   TY  +   +    R++ A   +   M++ G I   +
Sbjct: 419 MERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHI 465



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 243/462 (52%), Gaps = 4/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C P  VTYNT+LD LF+ GKL     L  +M  +    +  ++NILV+G C+ G 
Sbjct: 36  MKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGK 94

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+     M  ++  P+V TY++LI+G C A  + +A  L + M++    PDV+TY  
Sbjct: 95  IETALEFFRKM-DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTI 153

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   +  +   A++++ E+ + G  PN VT+N ++   C+  ++  A  ++R+M   G
Sbjct: 154 LVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG 213

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY TLID  CK G +++A  M+  M  KG   + +  N +++ LC   ++DE+ 
Sbjct: 214 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 273

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL  A   G   D V+Y ++I G  R  + + A +L   +K R   P    Y+ +I GL
Sbjct: 274 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK ++A D+   +   G   D  T++T+I G C  G+V++A     +MV     P  
Sbjct: 334 CKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 393

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED-AFGLLS 419
           +T N L+ GLC    L++A++          A  +VTYN LI  +C+  R++  A     
Sbjct: 394 MTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQ 453

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT-SIMVETG 460
           EM +  + PD  TY+ +   L +S  L E +      MV+ G
Sbjct: 454 EMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 250/497 (50%), Gaps = 20/497 (4%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M+  G  PN  TYN L+ G CK      A  + + M   +  P + TYN L++G    G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           LE A  L +EM   +   DV+++N L+     +G+   A +   ++D+    PN +T+++
Sbjct: 61  LERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   CK  ++ +A +++ +M+  G SPD +TY  L+D  CK   +  A+ ++  M   G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              N +T N++LH LC  +++ +A  L+   + RG   + V+YGTLI G  +  +   A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            +  +M ++   P    YN +I GL ++ + +++I +L   +  G+ PD  T++++I+G 
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   ++++A +    +  +   PD++  + L+ GLC+ G +++A   +      G   D 
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTY+TLI  LCK  R+++A  LL+ M      P   TY ++   L +   L+EA +    
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELV-- 416

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA-LQIFEETRQKGIA 514
                    ++ + N +       PS+++Y+  I+  C   R   A L  F+E    G+ 
Sbjct: 417 --------EEMERSNCA-------PSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVI 461

Query: 515 INKSTYMNLMNGLIKRR 531
            +  TY  L+ GL K +
Sbjct: 462 PDHITYSILLEGLKKSK 478



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 19/213 (8%)

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G  P+  T+N++I G C   + ++A +    M      P +VT N LL GL R G LE+A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
           +  F+  +L  ++ D +++N L++ LC+  ++E A     +M+++   P+  TY+ +   
Sbjct: 65  MALFQE-MLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDG 122

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L ++ R+ +A +    M   G                   P  I+Y+  ++  C + +  
Sbjct: 123 LCKANRVSQAVELLESMKARG-----------------CSPDVITYTILVDGLCKESKVA 165

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            A ++  E    G   N  TY +L++GL + R+
Sbjct: 166 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 198



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 19/182 (10%)

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M +   +P++VT N L+ GLC+    ++A + F        +   VTYNTL+  L +  +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           LE A  L  EM +++   D  ++  + T L  +G++E A +F                  
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFR---------------- 103

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             K  +   P+ I+YS  I+  C   R   A+++ E  + +G + +  TY  L++GL K 
Sbjct: 104 --KMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 161

Query: 531 RK 532
            K
Sbjct: 162 SK 163


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 238/462 (51%), Gaps = 3/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM--KKQGLVPNRTTYNILVSGYCKL 58
           M   G  P   TYNT+LD+  K G++++   LL DM  +  G +PN  TYN++++G  + 
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L++A ++VD+M  +K     +TYN LI G      +E+A  L  EME+  ++P VVTY
Sbjct: 280 GELEKAAQLVDIMRLSKK-ASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           NTLI+  F++G +  A    DE+   G+ P+ +T+N +I  YCK G + +A  +  +++ 
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P  +TYN LID  C+ G++E A R+ + M  +    +  T   +++  C  + L  
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAM 458

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
             +  +    +G   D  +Y T I+          A +L +EM  R I   T TYN +I 
Sbjct: 459 VRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLID 518

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++G  + A  +  +++  G+  D  T+  +IH  C  G++ +A    + MV     P
Sbjct: 519 GLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            +VT  I +   CR G L  A  +FR  + +G   + VTYN L+ +LC+  R E A+   
Sbjct: 579 SVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHF 638

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EM E+ L P++YTY  +     + G    A +    M + G
Sbjct: 639 HEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 232/516 (44%), Gaps = 20/516 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L  L    + +++R + SDM + G+ P+  TYN L+  +CK G + +A+ ++  M  
Sbjct: 198 NCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEA 257

Query: 74  NKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             +  LP+  TYN++ING    G LE+A +L   M  L       TYN LI         
Sbjct: 258 RAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLITGLLARDFV 316

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A  L+ E++  GI P  VT+N +I    K G  + A      M   G  PD +TYN+L
Sbjct: 317 EKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSL 376

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  CKAGN+++A  +   + R GL    +T N ++   C    L+ A  L    ++   
Sbjct: 377 INGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDC 436

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  +Y  L+ G             +DEM  + + P  F YN  I      G    A  
Sbjct: 437 LPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQ 496

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E++  G+  D  T+N +I G C  G ++ A     KMV    + D VT   L+   C
Sbjct: 497 LREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHC 556

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G L +A   F   +  G +   VTY   I + C+   L  A+G   +M E+ + P+  
Sbjct: 557 ERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEV 616

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +  AL   GR E A +    M+E G +                 P+  +Y+  I+ 
Sbjct: 617 TYNVLMHALCRMGRTESAYQHFHEMLERGLV-----------------PNKYTYTLLIDG 659

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            C +G +  A++++ E  QKGI  +  T+  L  G 
Sbjct: 660 SCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 192/388 (49%), Gaps = 36/388 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD +TYN++++   K G L +   L  D+K+ GL P   TYNIL+ GYC+LG 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A R+ + MT+   LPDV TY +L+NG C    L        EM S  L PD   YNT
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I+     G    AF+L +E+   GI  + VT+N++I   CK G +  A  +   M  +G
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDG 540

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              DCVTY  LI A+C+ G + EA  + D M   GL  + +T    +HT C    L  AY
Sbjct: 541 LRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAY 600

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                                  G+FR            +M E  + P+  TYN ++  L
Sbjct: 601 -----------------------GWFR------------KMLEEGVEPNEVTYNVLMHAL 625

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+TE A    +E+L+ G++P++ T+  +I G C EG    A++ + +M +K   PD 
Sbjct: 626 CRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDH 685

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL 388
            T N L  G   EG +  A+++  + +L
Sbjct: 686 CTHNALFKGF-GEGHMYDAVQYLENVVL 712



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 208/444 (46%), Gaps = 35/444 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEV---------------------------RD------ 31
           GCLP++VTYN +++ L +KG+L +                            RD      
Sbjct: 261 GCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAG 320

Query: 32  -LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
            LL +M+ +G+VP   TYN L+ G  K G  + A    D M     LPD+ TYN LING+
Sbjct: 321 ALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGY 380

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C AG L++A  L  +++   L P V+TYN LI+ +   G    A +L +E+ E    P+ 
Sbjct: 381 CKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDV 440

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
            T+ I++   C    +         M   G  PDC  YNT I A    G +  AF++ + 
Sbjct: 441 CTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREE 500

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M  +G+  +T+T N ++  LC    L +AY+L       G  LD V+Y  LI  +    +
Sbjct: 501 MMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGR 560

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A  ++D M    + PS  TY   I    + G    A     ++L+ G+ P+E T+N 
Sbjct: 561 LIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNV 620

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++H  C  G+ E A Q  ++M+E+   P+  T  +L+ G C+EG    A++ +     KG
Sbjct: 621 LMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680

Query: 391 KAVDSVTYNTLISSLCKERRLEDA 414
              D  T+N L      E  + DA
Sbjct: 681 IHPDHCTHNALFKGF-GEGHMYDA 703



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 227/481 (47%), Gaps = 56/481 (11%)

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           +EM    + P V   N ++    ++ R  +   +  ++ + G++P+  T+N ++  +CK 
Sbjct: 183 QEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKA 242

Query: 164 GKIDKACKIVRNMEEN--GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           G++D+A  ++++ME    G  P+ VTYN +I+   + G +E+A +++D+M R   K +  
Sbjct: 243 GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAF 301

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N ++  L     +++A  LL      G     V+Y TLI G F+   A  A   +DEM
Sbjct: 302 TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           + + ++P   TYN++I G  ++G  +QA+ +  +L ++G+ P   T+N +I G+C  G +
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDL 421

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCRE---------------------------- 373
           E A +   +M E+   PD+ T  IL++G C                              
Sbjct: 422 EGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTR 481

Query: 374 -------GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
                  G +  A +     +L+G + D+VTYN LI  LCK   L+DA+ L  +M    L
Sbjct: 482 ISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGL 541

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT------------ 474
             D  TY  +  A  E GRL EA+     MV +G     V       T            
Sbjct: 542 RLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYG 601

Query: 475 ------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  E ++P+ ++Y+  ++  C  GR + A Q F E  ++G+  NK TY  L++G  
Sbjct: 602 WFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSC 661

Query: 529 K 529
           K
Sbjct: 662 K 662


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 226/439 (51%), Gaps = 2/439 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T++ +++ L K G L +   L  +    G   +  TY  +V    K   ++EA+ +++ +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T N   P + TYN L+NG C  G LEEA  L +++      PDVVTY +LI+   +  RS
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA+KL  E+   G+  + V +  +I+   + GKI +A  + + M   G  PD VT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CKAG +  A R+   M  +GL  N +  + ++H LC  +K+D A  +L    K   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D ++Y  LI G  +      A   +DEM E    P  +TYN +I G  ++G T+ A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++  S   P+  T+ T+I G C   Q+ KA  ++  M E+   PD    + L+ GLC
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G LE     F      G A +S T   LI  LCK  R+++A  L + + ++ + P  Y
Sbjct: 361 KSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPY 418

Query: 432 TYAAIHTALVESGRLEEAQ 450
            Y +I +AL++SG++ E Q
Sbjct: 419 AYNSIISALIKSGKVNEGQ 437



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 234/451 (51%), Gaps = 19/451 (4%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+++LING   AGML +A  L +E  +     D+ TY T+++   ++ +  EA  L++++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
             +G  P   T+N ++   CK G++++A  ++R + +NG +PD VTY +LID   K    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            EA+++   M  +GL ++T+    ++  L    K+ +A  +  + + +G   D V+  T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G  +  +   A++++  M+ R + P+   Y+A+I GL ++ K + A++ML ++ ++  
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD  T+N +I G C  G V  A  F ++M+E   KPD+ T NIL+SG C+ G  + A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F        + + VTY TLIS LCK R+L  A      M+E+   PD + Y+++   L 
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           +SG+LE        M  +G  N Q                  + +  I   C   R  +A
Sbjct: 361 KSGKLEGGCMLFDEMERSGVANSQ------------------TRTRLIFHLCKANRVDEA 402

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + +F   R++G+  +   Y ++++ LIK  K
Sbjct: 403 VSLFNAIRKEGMP-HPYAYNSIISALIKSGK 432



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 2/281 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD VT +T++D L K G++     +   M+ +GL PN   Y+ L+ G CK   
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 224

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M +    PD  TYN+LI+G C +G +  A     EM      PDV TYN 
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++G +  A  + D++      PN VT+  +I   CK  ++ KA    ++M+E G
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG 344

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   Y++L+D  CK+G +E    + D M R G+  N+ T   ++  LC   ++DEA 
Sbjct: 345 CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAV 403

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
            L N+  K G      +Y ++I+   +  K N    ++ EM
Sbjct: 404 SLFNAIRKEGMP-HPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 164/347 (47%), Gaps = 37/347 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY +++D L KK +  E   L  +M  +GL  +   Y  L+ G  + G + +A
Sbjct: 99  GCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQA 158

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES---------------- 108
             V   MT    +PDV T + +I+G C AG +  A R+ K ME+                
Sbjct: 159 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 218

Query: 109 ----------LKLL---------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                     L++L         PD +TYN LI+   +SG    A    DE+ E G KP+
Sbjct: 219 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPD 278

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+NI+I  +CK G  D AC +  +M  +  SP+ VTY TLI   CK   + +A     
Sbjct: 279 VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQ 338

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M  +G   ++   ++++  LC   KL+   ML +   + G   +  +   LI    +  
Sbjct: 339 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKAN 397

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           + + A+ L++ ++ ++ MP  + YN++I  L +SGK  +   +  E+
Sbjct: 398 RVDEAVSLFNAIR-KEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 17/137 (12%)

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           T++ LI+ L K   L  A  L  E        D +TY  I   L ++ +++EA      +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
              G                   P+  +Y+  +N  C  GR ++A+ +  +    G   +
Sbjct: 61  TANG-----------------CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 103

Query: 517 KSTYMNLMNGLIKRRKS 533
             TY +L++GL K+++S
Sbjct: 104 VVTYTSLIDGLGKKKRS 120


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/514 (30%), Positives = 250/514 (48%), Gaps = 18/514 (3%)

Query: 7   LPDNVTYNTILDALFKKGKL-NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP  + +  +L A+ K G+  + V  L   M+  GL PN  T +IL++ +  L  +  A 
Sbjct: 94  LPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAF 153

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+  + +    P + T+  LIN  C  G   +A  L  +M +    PDV TY T+IN  
Sbjct: 154 SVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGL 213

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G +  A  L+ +++E G +PN VT++ +I  + K+ ++++A  I   M+  G SPD 
Sbjct: 214 CKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDI 273

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TYN+LI   C     +EA  +++ M    +  + +T N ++ T+C E K+ EA  +L +
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++ G   D V+Y +L+ GY    +   A KL+D M  +   P  F+YN +I G  +  +
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A  + NE++  G+ P+  ++NT+IHG C  G + +A      M      P++ T +I
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G C++G   KA + FR+        + V YN LI ++CK   L DA  L SE+  K 
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P+   Y  I   L + G L+EA +    M E G                   P  ISY
Sbjct: 514 LQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG-----------------CPPDEISY 556

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           +  I           A+Q+  E R KG   +  T
Sbjct: 557 NVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 231/462 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T + +++      +++    +L+ + K GL P   T+  L++  CK+G 
Sbjct: 124 MELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK 183

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +AM + D M      PDV+TY  +ING C  G    A  L K+ME     P+VVTY+T
Sbjct: 184 FAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYST 243

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  R  EA  +   +   GI P+  T+N +I+  C   +  +A  ++  M    
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN 303

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT+N L+D  CK G + EA  ++  M   G++ + +T +++++      ++ EA 
Sbjct: 304 IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEAR 363

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L ++   +G   D  SY  LI GY + ++ + A +L++EM  + + P+  +YN +I GL
Sbjct: 364 KLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGL 423

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G   +A ++   +  +G +P+  T++ ++ GFC +G   KA +    M     KP++
Sbjct: 424 CQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNL 483

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  NIL+  +C+ G L  A K F    +KG   ++  Y T+I+ LCKE  L++A      
Sbjct: 484 VMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRN 543

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           MEE    PD  +Y  I    +       A +    M + G I
Sbjct: 544 MEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 202/397 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TY TI++ L K G+      LL  M++ G  PN  TY+ ++  + K   
Sbjct: 194 MVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRR 253

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +   M      PD++TYN LI G CN    +EA  L  EM SL ++PD+VT+N 
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNV 313

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + G+  EA  ++  + E G++P+ VT++ ++  Y    ++ +A K+   M   G
Sbjct: 314 LVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG 373

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  +YN LI+  CK   ++EA ++ + M  +GL  N ++ NT++H LC    L EA 
Sbjct: 374 CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREAR 433

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +    G   +  +Y  L+ G+ +     +A +L+  M+     P+   YN +I  +
Sbjct: 434 NLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAM 493

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG    A  + +EL   G+ P+   + TII+G C EG +++AL+    M E    PD 
Sbjct: 494 CKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           ++ N+++ G        +A++       KG   D  T
Sbjct: 554 ISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 232/475 (48%), Gaps = 18/475 (3%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGML-EEAFRLRKEMESLKLLPD 114
           C    + +A+   + M   K LP +  +  L++     G   +    L K+ME   L P+
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           + T + LIN F    R   AF ++ ++ + G++P  VT   +I W CK GK  +A ++  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           +M   G  PD  TY T+I+  CK G    A  ++  M   G + N +T +TI+ +   ++
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +++EA  + +    +G   D  +Y +LI G     +   A  L +EM+   IMP   T+N
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++  + + GK  +A  +L  + + G+ PD  T++++++G+    +V +A +  + M+ K
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KPD+ + NIL++G C+   +++A + F   I +G   ++V+YNTLI  LC+   L +A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L   M      P+ +TY+ +     + G   +A +    M           Q   SK 
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM-----------QSTYSK- 480

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P+ + Y+  I+  C  G  +DA ++F E   KG+  N   Y  ++NGL K
Sbjct: 481 -----PNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK 530



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 172/364 (47%), Gaps = 17/364 (4%)

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           D    + + ME  G SP+  T + LI+       ++ AF ++  + + GL+   +T  T+
Sbjct: 115 DTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTL 174

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           ++ LC   K  +A  L +    RG   D  +Y T+I G  +  +   A  L  +M+E   
Sbjct: 175 INWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGC 234

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P+  TY+ +I    +  +  +A+D+ + +   G+ PD  T+N++I G C+  Q ++A  
Sbjct: 235 QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASA 294

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             N+M   +  PDIVT N+L+  +C+EG + +A    ++    G   D VTY++L+    
Sbjct: 295 LLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYS 354

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
               + +A  L   M  K   PD ++Y  +     +  R++EA++  + M+  G      
Sbjct: 355 LRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG------ 408

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                      + P+++SY+  I+  C  G  ++A  +F+     G   N  TY  L++G
Sbjct: 409 -----------LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDG 457

Query: 527 LIKR 530
             K+
Sbjct: 458 FCKQ 461



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 141/308 (45%), Gaps = 34/308 (11%)

Query: 242 LLNSASKRGYYLDEV-----------------SYGTLITGYFRDEKANRALKLWDEMKER 284
           LL++  K G Y D V                 +   LI  +   ++ + A  +  ++ + 
Sbjct: 103 LLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKL 162

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            + P+  T+  +I  L + GK  QA+++ ++++  G  PD  T+ TII+G C  G+   A
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
                KM E   +P++VT + ++    ++  + +AL  F    +KG + D  TYN+LI  
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQG 282

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   + ++A  LL+EM    + PD  T+  +   + + G++ EAQ     M E G    
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG---- 338

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        ++P  ++YS  +  +  +    +A ++F+    KG   +  +Y  L+
Sbjct: 339 -------------VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILI 385

Query: 525 NGLIKRRK 532
           NG  K ++
Sbjct: 386 NGYCKVKR 393



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 145/305 (47%), Gaps = 18/305 (5%)

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR-DEKANRALKLWDEMKERQIMPS 289
           C  + +D+A    N    R      + +  L++   +  +  +  + L  +M+   + P+
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
            +T + +I   S   + + A  +L ++++ G+ P   TF T+I+  C  G+  +A++  +
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            MV +  +PD+ T   +++GLC+ G    A    +     G   + VTY+T+I S  K+R
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+ +A  + S M+ K + PD +TY ++   L    + +EA   ++++ E   +N      
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEA---SALLNEMRSLN------ 303

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   I P  ++++  ++  C +G+  +A  + +   + G+  +  TY +LM G   
Sbjct: 304 --------IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSL 355

Query: 530 RRKSI 534
           R + +
Sbjct: 356 RSEVV 360


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 165/544 (30%), Positives = 276/544 (50%), Gaps = 22/544 (4%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG GC    VTYN  ++ L K  ++ E  ++   + ++GL  +  TY  LV G C++   
Sbjct: 252 EGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEF 311

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +  M ++D M +   +P     + LI G    G +E AF L  ++  L ++P++  YN++
Sbjct: 312 EVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSM 371

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN   ++G+  EA  L   + E G+ PN VT+ I+I  + +  K+D A      M E G 
Sbjct: 372 INSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           S    +YN++I+  CK G M+ A  +   M  KGLK    T  +++   C +  + +A+ 
Sbjct: 432 SATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFK 491

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +  + +G   + V++  LI G  +  K   A KL+DEM E +I+P+  TYN +I G  
Sbjct: 492 LYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHC 551

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G T +A ++L+E+++ G+ PD  T+  +I G CS G+V +A +F N +  K  + D +
Sbjct: 552 REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDEL 611

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS-SLCKERRLEDAFGLLSE 420
               LL G C+EG +++AL   +  + +G  +D V+Y  LIS +L +  R+   F LL E
Sbjct: 612 CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI--LFELLRE 669

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP----------- 469
           M  K + PD   Y  +    ++SG L++A +F  IM+  G + + V              
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 470 -NTSK------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
            N +K         E  P+ I+Y   ++    +G  ++ALQ+     Q   A N  TY  
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-NTVTYNI 788

Query: 523 LMNG 526
           L+ G
Sbjct: 789 LIRG 792



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/564 (27%), Positives = 261/564 (46%), Gaps = 54/564 (9%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY-------- 55
            G +P+   YN+++++L K GKL E   L S M ++GL PN  TY IL+ G+        
Sbjct: 359 LGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDV 418

Query: 56  ---------------------------CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
                                      CK G +K A  +   M      P V TY  LI+
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLIS 478

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G+C  G++ +AF+L  EM    + P+ VT+  LI    +  +  EA KL DE+ E  I P
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N VT+N++I+ +C+EG   +A +++  M + G SPD  TY  LI   C  G + EA   +
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + +  K  +++ +    +L   C E ++ EA +       RG  +D VSY  LI+G   +
Sbjct: 599 NDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGAL-N 657

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +      +L  EM  + + P    Y  +I G  +SG  ++A +    ++  G +P+  T+
Sbjct: 658 QNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTY 717

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             +++G    G V +A     +M+     P+ +T    L  L +EG +E AL+   + +L
Sbjct: 718 TALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA-ML 776

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   ++VTYN LI   C+  + ++A  LL  M    + PD  TY+       + G ++ 
Sbjct: 777 QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDA 836

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      M++ G                 + P  + ++  I+  C  G    ALQ+  + 
Sbjct: 837 AMDMWECMLQRG-----------------LKPDRVVFNFLIHACCLNGELDRALQLRNDM 879

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             +G+   +STY +LM  L +R +
Sbjct: 880 MLRGLKPTQSTYHSLMVQLAQRAR 903



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 254/499 (50%), Gaps = 17/499 (3%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M+  GL+P   T + L++   ++   ++ + + D +      PD + Y +++   C    
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
             +A  +  + E       +VTYN  IN   +S R  EA ++   L E G+K + VT+  
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++   C+  + +   +++  M E G+ P     + LI+   K G++E AF +++ +G+ G
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  N    N+++++LC   KL+EA +L +  ++RG   ++V+Y  LI G+ R  K + A 
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
             +++M E  I  + ++YN+MI    + GK + A  +  E++  G+ P   T+ ++I G+
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C +G V KA + +++M  K   P+ VT   L+ GLC+   + +A K F   +      + 
Sbjct: 481 CKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNE 540

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYN LI   C+E     AF LL EM +K L PD YTY  +   L  +GR+ EA++F + 
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIN- 599

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                 ++H+          + +D   + Y+  +   C +GR K+AL   +E   +G+ +
Sbjct: 600 -----DLHHK---------HQRLD--ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQM 643

Query: 516 NKSTYMNLMNGLIKRRKSI 534
           +  +Y  L++G + +   I
Sbjct: 644 DLVSYAVLISGALNQNDRI 662



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 223/473 (47%), Gaps = 35/473 (7%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++++   K GK+     L  +M  +GL P   TY  L+SGYCK G + +A ++   M
Sbjct: 437 SYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T     P+  T+  LI G C    + EA +L  EM  LK+LP+ VTYN LI      G +
Sbjct: 497 TGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNT 556

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             AF+L+DE+ + G+ P+  T+  +I   C  G++ +A + + ++       D + Y  L
Sbjct: 557 TRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTAL 616

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITL---------------------------- 223
           +   CK G ++EA      M  +GL+M+ ++                             
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQ 676

Query: 224 -NTILHTLCCEK-----KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            + +++T+  +       L +A+         GY  + V+Y  L+ G F+    N A  L
Sbjct: 677 PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL 736

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           +  M   + +P+  TY   +  L++ G  E A+ + N +LQ G   +  T+N +I G+C 
Sbjct: 737 FKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQ 795

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G+ ++A +  + M+     PD +T +  +   C+ G ++ A+  +   + +G   D V 
Sbjct: 796 IGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVV 855

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
           +N LI + C    L+ A  L ++M  + L P + TY ++   L +  RL + Q
Sbjct: 856 FNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 220/445 (49%), Gaps = 17/445 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           ++MLI  +     + +   +   M    LLP+V T + L+N      +  +  +L D L 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
             G+KP+   + +++K  C+    +KA +I+   E NG S   VTYN  I+  CK+  + 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           EA  +   +G KGLK + +T  T++  LC  ++ +    +++   + GY   E +   LI
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G  +      A +L +++ +  ++P+ F YN+MI  L ++GK E+A  + + + + G+ 
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P++ T+  +I GF    +++ A  + NKM+E      + + N +++  C+ G ++ A   
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F+  + KG      TY +LIS  CK+  +  AF L  EM  K + P+  T+ A+   L +
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             ++ EA K    MVE                  +I P+ ++Y+  I  HC +G    A 
Sbjct: 518 INKMAEASKLFDEMVEL-----------------KILPNEVTYNVLIEGHCREGNTTRAF 560

Query: 503 QIFEETRQKGIAINKSTYMNLMNGL 527
           ++ +E  +KG++ +  TY  L+ GL
Sbjct: 561 ELLDEMIKKGLSPDTYTYRPLIAGL 585



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 208/415 (50%), Gaps = 10/415 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VT+  ++  L +  K+ E   L  +M +  ++PN  TYN+L+ G+C+ G 
Sbjct: 496 MTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGN 555

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  ++D M +    PD +TY  LI G C+ G + EA     ++       D + Y  
Sbjct: 556 TTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTA 615

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI----VRNM 176
           L+  F + GR  EA     E+   G++ + V++ ++I      G +++  +I    +R M
Sbjct: 616 LLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI-----SGALNQNDRILFELLREM 670

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G  PD V Y  LID   K+GN+++AF    +M  +G   N++T   +++ L     +
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           +EA +L           + ++YG  +    ++     AL+L + M +     +T TYN +
Sbjct: 731 NEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS-FANTVTYNIL 789

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I G  Q GK ++A  +L+ ++  GM+PD  T++T I+ +C  G V+ A+     M+++  
Sbjct: 790 IRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGL 849

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           KPD V  N L+   C  G L++AL+     +L+G      TY++L+  L +  RL
Sbjct: 850 KPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 120/239 (50%), Gaps = 1/239 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PDNV Y  ++D   K G L +  +    M  +G VPN  TY  LV+G  K G+
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +   M   +++P+  TY   ++     G +E A +L   M       + VTYN 
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANTVTYNI 788

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + + G+  EA KL+D +   G+ P+ +T++  I  YCK G +D A  +   M + G
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG 848

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             PD V +N LI A C  G ++ A ++ + M  +GLK    T ++++  L    +L + 
Sbjct: 849 LKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 17/276 (6%)

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            +  LI  Y ++++    + + + M++  ++P   T +A++  L++  K  Q +++ + L
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           + +G+ PD   +  ++   C      KA +  N+         IVT N+ ++GLC+   +
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +A++  RS   KG   D VTY TL+  LC+ +  E    ++ EM E    P     + +
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L++ G +E A     ++ + GK+               + P+   Y+  IN  C  G
Sbjct: 337 IEGLIKMGSIEGA---FELLNKVGKLG--------------VVPNLFVYNSMINSLCKTG 379

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++A  +F    ++G+  N  TY  L++G  +R K
Sbjct: 380 KLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAK 415


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 264/521 (50%), Gaps = 18/521 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT+++  F++GK+N  R + + M +Q LVP+  TY  ++ GYC+   + +A+ +
Sbjct: 328 PDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSI 387

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M     +P   TY+ L+NG+C   ML  A  L ++++S  +  +      LI+ F +
Sbjct: 388 LSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQ 447

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A +++  + E GI P+ +T++ +I   C+  K+ +  +I+  M+++G  P+ V 
Sbjct: 448 VGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVL 507

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLI   CKAG ++EA +    + R+GL  N +  N +LH    E  + EA       S
Sbjct: 508 YTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMS 567

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     D VS+  +I  Y        A  ++D+M      P+  TY  ++ GL Q G   
Sbjct: 568 RMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLV 627

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA   ++ LL      DE TFN ++ G C  G +++AL    KM++ +  PDI T  ILL
Sbjct: 628 QARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILL 687

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-L 426
           SG CR+G +  AL   +  + KG   D+V Y  L++ L  E +++ A  +  E+  K+ L
Sbjct: 688 SGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGL 747

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D   Y ++    ++S  +   ++  S M +                  E+ P+S SY+
Sbjct: 748 YADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQ-----------------NEVYPNSASYN 790

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ +  +G++  +L +++   +KGI  +  TY  L+ GL
Sbjct: 791 ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 831



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 256/526 (48%), Gaps = 18/526 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           + ++VTYNTIL    KKG+      +L DM++  +  +  TYNI++   C++     A  
Sbjct: 257 ISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFL 316

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M ++   PD  TYN LING+   G +  A  +   M    L+P V TY T+I+ + 
Sbjct: 317 LLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYC 376

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            + R  +A  ++ E+   G+ P+ +T++ ++  YCK   +  A  ++ +++  G + +  
Sbjct: 377 RNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKT 436

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
               LID  C+ G + +A +++  M   G+  + IT + +++ +C   K+ E   +L+  
Sbjct: 437 MRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRM 496

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G   ++V Y TLI  Y +      ALK + ++  R ++ +   +NA++    + G  
Sbjct: 497 QKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMI 556

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A      + +  +  D  +FN II  +C  G +  A   ++ MV   + P++ T   L
Sbjct: 557 TEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNL 616

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLC+ G L +A +F    +    A+D  T+N L+  +C+   L++A  L  +M +   
Sbjct: 617 LRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNC 676

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD +TY  + +     G++  A     +M+E G +                 P +++Y+
Sbjct: 677 LPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVV-----------------PDTVAYT 719

Query: 487 EKINEHCSQGRYKDALQIFEETRQK-GIAINKSTYMNLMNGLIKRR 531
             +N   ++G+ K A  +F E   K G+  +   Y +LMNG +K R
Sbjct: 720 CLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSR 765



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 240/498 (48%), Gaps = 36/498 (7%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +G  P+  TY  +L  L + G L + R  +S +       +  T+N L+ G C+ G 
Sbjct: 601  MVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGT 660

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA+ + + M +N  LPD+ TY +L++G+C  G +  A  + + M    ++PD V Y  
Sbjct: 661  LDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTC 720

Query: 121  LINRFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            L+N     G+   A  +  E+  + G+  + + +N ++  Y K   ++   +++ +M +N
Sbjct: 721  LLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQN 780

Query: 180  GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
               P+  +YN L+    K G   ++  +   M RKG++ + +T   ++  L     +D A
Sbjct: 781  EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIA 840

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               L      G + D + +  LIT +    K + AL++++ MK   + PS+ T++AMI G
Sbjct: 841  VKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMING 900

Query: 300  LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            L + G  + +  +L+E+LQ G+ P+ T +  +++  C  G++++A +   +M      P 
Sbjct: 901  LIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPA 960

Query: 360  IVTCNILLSGLCREGILEKALKFFRSWILKGKA--------------------------- 392
             V  + ++ GLCR G LE+A+  F S +  G                             
Sbjct: 961  EVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKR 1020

Query: 393  --------VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                    VD V+YN LI+ LCK++ + DA  L  EM+ K L P+  TY  +  A+  +G
Sbjct: 1021 LMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTG 1080

Query: 445  RLEEAQKFTSIMVETGKI 462
            R++  ++    + E G I
Sbjct: 1081 RVQNGEELLEDIEERGLI 1098



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/595 (22%), Positives = 282/595 (47%), Gaps = 67/595 (11%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD +TY+ +++ + +  K++E +++LS M+K G++PN   Y  L+  YCK G++KEA
Sbjct: 465  GIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEA 524

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++    + +   + +   +N L++ +   GM+ EA   R+ M  + +  D V++N +I+ 
Sbjct: 525  LKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDS 584

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +   G  + AF + D++  +G  PN  T+  +++  C+ G + +A + +  + +  F+ D
Sbjct: 585  YCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAID 644

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+N L+   C+ G ++EA  + + M +     +  T   +L   C + K+  A ++L 
Sbjct: 645  EKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQ 704

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWGLSQS 303
               ++G   D V+Y  L+ G   + +   A  ++ E+  ++ +      YN+++ G  +S
Sbjct: 705  MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKS 764

Query: 304  GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
                    M++++ Q+ + P+  ++N ++HG+   GQ  K+L  +  MV K  +PD VT 
Sbjct: 765  RNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 824

Query: 364  NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             +L+ GL   G+++ A+KF    +L+G   D + ++ LI++  ++ ++ +A  + + M+ 
Sbjct: 825  RLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKW 884

Query: 424  KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK---------- 473
              + P   T++A+   L+  G L+ + K    M++ G      +QPN +           
Sbjct: 885  LHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVG------LQPNHTHYIALVNAKCR 938

Query: 474  -------------------TPEEIDPSSI------------------------------S 484
                                P E+  SSI                              +
Sbjct: 939  VGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVAT 998

Query: 485  YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++  ++  C + +  DAL +        + ++  +Y  L+ GL K  K IS A+D
Sbjct: 999  FTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCK-DKHISDALD 1052



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 226/456 (49%), Gaps = 36/456 (7%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            D  T+N +L  + + G L+E  DL   M K   +P+  TY IL+SG+C+ G +  A+ ++
Sbjct: 644  DEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVIL 703

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINRFFE 127
             +M +   +PD   Y  L+NG  N G ++ A  +  E+   + L  D + YN+L+N + +
Sbjct: 704  QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLK 763

Query: 128  SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            S       +++ ++ ++ + PN+ ++NI++  Y K G+  K+  + + M   G  PD VT
Sbjct: 764  SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVT 823

Query: 188  YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN--- 244
            Y  LI    + G ++ A + ++ M  +G+  + +  + ++     + K+  A  + N   
Sbjct: 824  YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMK 883

Query: 245  ----SASKRGY-----------YLDE-----------------VSYGTLITGYFRDEKAN 272
                S S + +           YLD                    Y  L+    R  + +
Sbjct: 884  WLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEID 943

Query: 273  RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            RA +L +EMK   I+P+    +++I GL + GK E+A+ + + +++SGM+P   TF T++
Sbjct: 944  RAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLM 1003

Query: 333  HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            H  C E ++  AL     M     + D+V+ N+L++GLC++  +  AL  +     KG  
Sbjct: 1004 HSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLW 1063

Query: 393  VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
             +  TY TL  ++    R+++   LL ++EE+ L P
Sbjct: 1064 PNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 178/354 (50%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G   D + YN++++   K   +N ++ ++SDM +  + PN  +YNIL+ GY K G   ++
Sbjct: 746  GLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 805

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +   M +    PD  TY +LI G    G+++ A +  ++M    + PD + ++ LI  
Sbjct: 806  LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITA 865

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F E  +   A ++ + +    + P++ T + MI    ++G +D + K++  M + G  P+
Sbjct: 866  FSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPN 925

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               Y  L++A C+ G ++ AFR+ + M   G+    +  ++I+  LC   KL+EA ++ +
Sbjct: 926  HTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFS 985

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            S  + G      ++ TL+    ++ K   AL L   M+  ++     +YN +I GL +  
Sbjct: 986  SMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDK 1045

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
                A+D+  E+   G+ P+ TT+ T+     S G+V+   +    + E+   P
Sbjct: 1046 HISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/467 (22%), Positives = 207/467 (44%), Gaps = 54/467 (11%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           V +  L+  + +  + ++A   +  +D+ G K + V+ N ++    +EG+       +R 
Sbjct: 157 VVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRE 216

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH------- 228
                F     T N L+++ C  G   +A  M+  M    +  N++T NTILH       
Sbjct: 217 SLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGR 275

Query: 229 ----------------------------TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
                                        LC  K+   A++LL    K     DE +Y T
Sbjct: 276 FKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNT 335

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI G+FR+ K N A  +++ M  + ++PS  TY  MI G  ++ + ++A+ +L+E+  +G
Sbjct: 336 LINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITG 395

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           ++P E T++ +++G+C    +  A+     +  +    +     IL+ G C+ G + KA 
Sbjct: 396 VMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAK 455

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +  +S    G   D +TY+ LI+ +C+  ++ +   +LS M++  + P+   Y  +    
Sbjct: 456 QILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYY 515

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQP------------------NTSKTPEEIDPSS 482
            ++G ++EA K    +   G + + V+                        +   I   S
Sbjct: 516 CKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDS 575

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +S++  I+ +C +G    A  ++++  + G + N  TY NL+ GL +
Sbjct: 576 VSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQ 622



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 173/376 (46%), Gaps = 18/376 (4%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N V   +++K Y KE K+  A   V  M++ GF    V+ NT+++A  + G  +  +  +
Sbjct: 155 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFL 214

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
                +   +   T N +L++LC   +  +A  +L    K  +  + V+Y T++  Y + 
Sbjct: 215 RESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCHISNSVTYNTILHWYVKK 273

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +   AL + ++M+   +    +TYN MI  L +  ++ +A  +L  + +  + PDE T+
Sbjct: 274 GRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTY 333

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           NT+I+GF  EG++  A    N M+ ++  P + T   ++ G CR   ++KAL       +
Sbjct: 334 NTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQI 393

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G     +TY+ L++  CK   L  A  L+ +++ + +  ++     +     + G + +
Sbjct: 394 TGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISK 453

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A++    M E G                 IDP  I+YS  IN  C   +  +  +I    
Sbjct: 454 AKQILKSMFEDG-----------------IDPDVITYSALINGMCRMAKMHETKEILSRM 496

Query: 509 RQKGIAINKSTYMNLM 524
           ++ GI  N   Y  L+
Sbjct: 497 QKSGILPNDVLYTTLI 512



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 144/285 (50%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PDNVTY  ++  L + G ++     L  M  +G+ P+R  ++IL++ + +   +  A
Sbjct: 816  GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNA 875

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++V + M      P   T++ +ING    G L+ + ++  EM  + L P+   Y  L+N 
Sbjct: 876  LQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNA 935

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                G    AF+L +E+   GI P  V  + +I+  C+ GK+++A  +  +M  +G  P 
Sbjct: 936  KCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPT 995

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+ TL+ + CK   + +A  +  +M    L+++ ++ N ++  LC +K + +A  L  
Sbjct: 996  VATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYG 1055

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
                +G + +  +Y TL    +   +     +L ++++ER ++P+
Sbjct: 1056 EMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPA 1100



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G +P  V  ++I+  L + GKL E   + S M + G+VP   T+  L+   CK   
Sbjct: 952  MKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESK 1011

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A+ +  LM   +   DV +YN+LI G C    + +A  L  EM+S  L P++ TY T
Sbjct: 1012 IADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYIT 1071

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKP 148
            L    + +GR     +L+++++E G+ P
Sbjct: 1072 LTGAMYSTGRVQNGEELLEDIEERGLIP 1099


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 230/422 (54%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+NT++  LF +GK++E   L+  M + G  P+  TYN +V+G C+ G    A+ +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +     DV+TY+ +I+  C  G ++ A  L KEME+  +   VVTYN+L+    +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  +   L+ ++    I PN +T N+++  + KEGK+ +A ++ + M   G SP+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL+D  C    + EA  M+D+M R     + +T  +++   C  K++D+   +  + S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KRG   + V+Y  L+ G+ +  K   A +L+ EM    ++P   TY  ++ GL  +GK E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  +L +S M      + TII G C  G+VE A      +  K  KP+++T  +++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SGLC++G L +A    R     G A +  TYNTLI +  ++  L  +  L+ EM+     
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 428 PD 429
            D
Sbjct: 576 AD 577



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 234/449 (52%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++   +  K      +L  + K G  P+ TT+N L+ G    G + EA+ +VD M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N   PDV TYN ++NG C +G    A  L ++ME   +  DV TY+T+I+     G  
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L  E++  GIK + VT+N +++  CK GK +    ++++M      P+ +T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D   K G ++EA  +   M  +G+  N IT NT++   C + +L EA  +L+   +   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V++ +LI GY   ++ +  +K++  + +R ++ +  TY+ ++ G  QSGK + A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E++  G++PD  T+  ++ G C  G++EKAL+    + +      IV    ++ G+C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G +E A   F S   KG   + +TY  +IS LCK+  L +A  LL +MEE    P+  
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +  A +  G L  + K    M   G
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCG 573



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 204/401 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTYN+I++ + + G  +   DLL  M+++ +  +  TY+ ++   C+ G +  A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M        V TYN L+ G C AG   +   L K+M S +++P+V+T+N L++ 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+  EA +L  E+   GI PN +T+N ++  YC + ++ +A  ++  M  N  SPD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+ +LI   C    +++  ++   + ++GL  N +T + ++   C   K+  A  L  
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++YG L+ G   + K  +AL++++++++ ++      Y  +I G+ + G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A ++   L   G+ P+  T+  +I G C +G + +A     KM E    P+  T N
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            L+    R+G L  + K        G + D+ +   +I  L
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 139/245 (56%), Gaps = 1/245 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD VT+ +++       ++++   +  ++ K+GLV N  TY+ILV G+C+ G +K A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M  +  LPDV TY +L++G C+ G LE+A  + ++++  K+   +V Y T+I   
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G+  +A+ L   L   G+KPN +T+ +MI   CK+G + +A  ++R MEE+G +P+ 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE-KKLDEAYMLLN 244
            TYNTLI A+ + G++  + ++++ M   G   +  ++  ++  L    K+L   Y L  
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSK 603

Query: 245 SASKR 249
            +  R
Sbjct: 604 GSKSR 608



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 20/278 (7%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D K + A+ L+ EM   + +PS   ++     ++++ +    +D   +L  +G+  +  T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            N +I+ FC   +   A     K+++  ++PD  T N L+ GL  EG + +A+      +
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   D VTYN++++ +C+      A  LL +MEE+ +  D +TY+ I  +L   G ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 448 EAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEK 488
            A      M ET  I   VV  N+                        EI P+ I+++  
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++    +G+ ++A ++++E   +GI+ N  TY  LM+G
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 246/465 (52%), Gaps = 6/465 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  +YN ++  L++ GK ++   +  +M  +G+ PN+ TYN ++ G+ K G L+   R+
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M Q+   P+V TYN+L++G C AG ++E   L  EM S  +LPD  TY+ L +    
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  E  + G+   A T +I++   CK+GK+ KA +++  +   G  P    
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+  +++ AF + + M  + ++ + IT N +++ LC  + + EA  L+    
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G      ++ TLI  Y R  +  +   +  +M+++ I  +  ++ +++    ++GK  
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L++++   ++P+   +N+II  +   G  E+A     KM        I T N+LL
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+   +++A +   +   +G   D V+YNT+IS+ C +   + A  LL EM +  + 
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           P   TY  + +AL  +GR+ + +     MV      H+ V+P++S
Sbjct: 613 PTLRTYHPLLSALGSAGRVHDMECLYQHMV------HKNVEPSSS 651



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 251/523 (47%), Gaps = 19/523 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP   + N +L++L   G+  +VR     +   G  P+   +N  V      G L EA+ 
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 67  VVDLM--TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++  M  ++    PD ++YN++I G   +G   +A ++  EM    + P+ +TYNT+I+ 
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G     F+L D++ + G KPN VT+N+++   C+ G++D+   ++  M      PD
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+ L D   + G+      +     +KG+ +   T + +L+ LC + K+ +A  +L 
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G       Y TLI GY +      A  ++++MK R I P   TYNA+I GL +  
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A D++ E+ +SG+ P   TFNT+I  +   GQ+EK     + M +K  K ++++  
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFG 479

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++   C+ G + +A+      I K    ++  YN++I +  +    E AF L+ +M+  
Sbjct: 480 SVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSS 539

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +    +TY  +   L ++ +++EA++    +   G                 + P  +S
Sbjct: 540 GVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG-----------------LRPDVVS 582

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I+  C++G    AL++ +E  +  I     TY  L++ L
Sbjct: 583 YNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSAL 625



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 219/460 (47%), Gaps = 41/460 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +TYNT++D   K G L     L   M + G  PN  TYN+L+SG C+ G + E 
Sbjct: 225 GVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDET 284

Query: 65  MRVVDLMTQNKSLPDVWTY-----------------------------------NMLING 89
             ++D MT    LPD +TY                                   ++L+NG
Sbjct: 285 RALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNG 344

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C  G + +A ++ + +    L+P    YNTLIN + +      AF + +++    I+P+
Sbjct: 345 LCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPD 404

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            +T+N +I   CK   I +A  +V  ME++G  P   T+NTLIDA  +AG +E+ F ++ 
Sbjct: 405 HITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLS 464

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M  KG+K N I+  +++   C   K+ EA  +L+    +    +   Y ++I  Y    
Sbjct: 465 DMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESG 524

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
              +A  L ++MK   +  S FTYN ++ GL ++ + ++A +++  L   G+ PD  ++N
Sbjct: 525 GTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYN 584

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           TII   C++G  ++AL+   +M +   +P + T + LLS L   G +      ++  + K
Sbjct: 585 TIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK 644

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
                S  Y T   +  K   L+       EM EK +  D
Sbjct: 645 NVEPSSSIYGTRCENESKVASLK------KEMSEKGIAFD 678



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 185/358 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +  LPD  TY+ + D L + G    +  L  +  K+G++    T +IL++G CK G 
Sbjct: 291 MTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGK 350

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A +V++++     +P    YN LING+C    L+ AF + ++M+S  + PD +TYN 
Sbjct: 351 VAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNA 410

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   +     EA  L+ E+++ G+ P+  T N +I  Y + G+++K   ++ +M++ G
Sbjct: 411 LINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKG 470

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + +++ +++ A CK G + EA  ++D M  K +  N    N+I+         ++A+
Sbjct: 471 IKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAF 530

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +L+      G      +Y  L+ G  ++ + + A +L   +  + + P   +YN +I   
Sbjct: 531 LLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISAC 590

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
              G T++A+++L E+ +  + P   T++ ++    S G+V      +  MV K+ +P
Sbjct: 591 CNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEP 648



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 170/361 (47%), Gaps = 20/361 (5%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMNTITLNTILHTLCCEKKLD 237
           G  PD   +N  + A   AG+++EA  M+  MGR       +  + N ++  L    K  
Sbjct: 153 GARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 212

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  + +    RG   ++++Y T+I G+ +        +L D+M +    P+  TYN ++
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL ++G+ ++   +++E+    M+PD  T++ +  G    G     L    + ++K   
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
               TC+ILL+GLC++G + KA +     +  G    +  YNTLI+  C+ R L+ AF +
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             +M+ + + PD  TY A+   L +   + EA+     M ++G                 
Sbjct: 393 FEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG----------------- 435

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +DPS  +++  I+ +   G+ +    +  + + KGI  N  ++ +++    K  K I +A
Sbjct: 436 VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK-IPEA 494

Query: 538 V 538
           V
Sbjct: 495 V 495



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 22/293 (7%)

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAM 296
           A+ LL +A  R    D  ++   +         + AL +   M   E    P  F+YN +
Sbjct: 145 AFGLLVAAGARP---DTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVV 201

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I GL +SGK   A+ + +E++  G+ P++ T+NT+I G    G +E   +  ++M++   
Sbjct: 202 IAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGR 261

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           KP++VT N+LLSGLCR G +++               D  TY+ L   L +         
Sbjct: 262 KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLS 321

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           L  E  +K +    YT + +   L + G++ +A++   ++V TG +              
Sbjct: 322 LFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV-------------- 367

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              P++  Y+  IN +C     + A  IFE+ + + I  +  TY  L+NGL K
Sbjct: 368 ---PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 20/256 (7%)

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R  +PS  + N ++  L   G+          L+ +G  PD   +N  +    + G +++
Sbjct: 117 RSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDE 176

Query: 344 ALQFHNKM--VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           AL    +M   E +  PD  + N++++GL R G    ALK F   + +G A + +TYNT+
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I    K   LE  F L  +M +    P+  TY  + + L  +GR++E +     M     
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM----- 291

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                       T   + P   +YS   +     G  +  L +F E+ +KG+ I   T  
Sbjct: 292 ------------TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCS 339

Query: 522 NLMNGLIKRRKSISKA 537
            L+NGL K  K ++KA
Sbjct: 340 ILLNGLCKDGK-VAKA 354


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 237/450 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +NTI+ ++ K         LL  M  +G+ P+  T +I ++ YC LG +  A  
Sbjct: 81  LPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFS 140

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+ ++ +    P+  T   ++ G C  G +++A      + +  +L D V Y TLIN   
Sbjct: 141 VLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLC 200

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + GRS++AF+L+ E++   +KPN V +N++I  +CK+    KA  +   + + G  PD +
Sbjct: 201 KIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDIL 260

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +LI   C+ G   E  ++M  M  K +  N  T N ++   C + K+ EA  + N  
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 320

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            KRG   D V++ TLI+G+        A KL+D + ER I+P  ++Y  +I G  +  + 
Sbjct: 321 VKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRI 380

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A+ + NE+    M+ D   ++++I G C  G++  A +  + +      P+++T NIL
Sbjct: 381 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 440

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +   C+   ++  ++ F+    KG     +TYN LI+  CK +R+ +A  LLS M+ K L
Sbjct: 441 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 500

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            PD  TY ++   L +SGR+ +A +   +M
Sbjct: 501 APDSITYNSLFDGLCKSGRISDAWELFKVM 530



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 225/439 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T +  ++     G++     +L  + K+G  PN  T   ++ G C  G +++A
Sbjct: 114 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 173

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M   D +     L D   Y  LING C  G   +AF+L +EME   + P++V YN +I+ 
Sbjct: 174 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDS 233

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +   + +A  L  ++ + GI P+ +T+  +I+ +C+ G+  +  +++  M     +P+
Sbjct: 234 FCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPN 293

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LIDA C+ G M EA  M ++M ++G + + +T NT++   C    + EA  L +
Sbjct: 294 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFD 353

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  +RG   D  SY  LI GY + ++ + A+ L++EM+ + ++     Y+++I GL +SG
Sbjct: 354 TVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSG 413

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A ++ + +   G  P+  T+N +I  FC    ++  ++    M  K   P ++T N
Sbjct: 414 RISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYN 473

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL++G C+   + +A+        K  A DS+TYN+L   LCK  R+ DA+ L   M   
Sbjct: 474 ILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVG 533

Query: 425 KLGPDRYTYAAIHTALVES 443
               D  TY  +  A  ++
Sbjct: 534 GPPVDVATYNVLLDAFCKA 552



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 211/402 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+N+T  T++  L   G++ +  D   ++  QG++ +   Y  L++G CK+G   +A ++
Sbjct: 152 PNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQL 211

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      P++  YNM+I+ +C   +  +A  L  ++  + + PD++TY +LI  F  
Sbjct: 212 LQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCR 271

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  E  +L+ E+    I PN  T N++I  +C++GK+ +A  +   M + G  PD VT
Sbjct: 272 TGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVT 331

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NTLI  +C  GN+ EA ++ D +  +G+  +  +   ++   C  K++DEA  L N   
Sbjct: 332 FNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMR 391

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +   LD V Y +LI G  +  + + A +L+  +      P+  TYN +I    +    +
Sbjct: 392 CKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDID 451

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
             I++   +   G+ P   T+N +I+G+C   ++ +A+   + M  K+  PD +T N L 
Sbjct: 452 MGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLF 511

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            GLC+ G +  A + F+   + G  VD  TYN L+ + CK +
Sbjct: 512 DGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 223/477 (46%), Gaps = 18/477 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ + + +   + LP V  +N +I           A  L K+M    + P + T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            IN +   G    AF ++  + + G +PN +T   ++K  C  G++ KA     N+   G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V Y TLI+  CK G   +AF+++  M  + +K N +  N I+ + C ++   +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D ++Y +LI G+ R  +     +L  EM  + I P+ +T+N +I   
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK  +A  M N +++ G  PD  TFNT+I G C  G V +A +  + + E+   PD+
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            +  IL+ G C+   +++A+  F     K   +D V Y++LI  LCK  R+  A+ L S 
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +      P+  TY  +  A  +   ++   +   +M   G                 + P
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG-----------------LTP 467

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           + ++Y+  IN +C   R ++A+ +    + K +A +  TY +L +GL K  + IS A
Sbjct: 468 TVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR-ISDA 523



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 169/341 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG    P+ V YN I+D+  K     + RDL   +   G+ P+  TY  L+ G+C+ G 
Sbjct: 215 MEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQ 274

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E  +++  M      P+V+T+N+LI+ +C  G + EA  +   M      PD+VT+NT
Sbjct: 275 WGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNT 334

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G  +EA KL D + E GI P+  ++ I+I  YCK  +ID+A  +   M    
Sbjct: 335 LISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKN 394

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V Y++LID  CK+G +  A+ +   +   G   N IT N ++   C  + +D   
Sbjct: 395 MVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGI 454

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +G     ++Y  LI GY + ++   A+ L   M+ + + P + TYN++  GL
Sbjct: 455 ELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGL 514

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            +SG+   A ++   +   G   D  T+N ++  FC    V
Sbjct: 515 CKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 164/373 (43%), Gaps = 53/373 (14%)

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           ID A  +  ++      P  + +NT+I +  K  +   A  ++  M  KG+  +  TL+ 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
            ++  C   ++  A+ +L    KRGY                                  
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGY---------------------------------- 150

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P+  T   ++ GL  +G+ ++A+D  + +   GM+ DE  + T+I+G C  G+   A 
Sbjct: 151 -QPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAF 209

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           Q   +M  +  KP+IV  N+++   C++ +  KA   +   +  G   D +TY +LI   
Sbjct: 210 QLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGF 269

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C+  +  +   L+ EM  K + P+ YT+  +  A    G++ EAQ   ++MV+ G+    
Sbjct: 270 CRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQ---- 325

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                         P  ++++  I+ HC  G   +A ++F+   ++GI  +  +Y  L+ 
Sbjct: 326 -------------QPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 372

Query: 526 GLIKRRKSISKAV 538
           G  K ++ I +AV
Sbjct: 373 GYCKCKR-IDEAV 384



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 52/270 (19%)

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTI---------------------------- 331
           LS     + A+ + N L+    +P    FNTI                            
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 332 -------IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
                  I+ +C  G++  A      ++++ ++P+ +T   ++ GLC  G ++KA+ F  
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           +   +G  +D V Y TLI+ LCK  R  DAF LL EME + + P+   Y  I  +  +  
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDE 238

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
              +A+     +V+ G                 IDP  ++Y+  I   C  G++ +  Q+
Sbjct: 239 LTCKARDLYLKIVDMG-----------------IDPDILTYTSLIRGFCRTGQWGEVKQL 281

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             E   K I  N  T+  L++   ++ K I
Sbjct: 282 MCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 241/488 (49%), Gaps = 21/488 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP     N +LD L KKG+ + +  +  DM  +G  PN  TY  L+ G C+ G   +A R
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M + K  P V  Y +LI G C    + EA  + + M +  +LP++ TYNT+++ + 
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     +A +L  E+   G+ PN VT  I+I   CK  ++  A K + +M   G  P+  
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LID  CKAGN+ EA  +   + +  +  +  T + ++  LC   +++EA  LL   
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K+G+  + V+Y TLI GY ++    +A+++  +M E+ I P+  T++ +I G  ++GK 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A+ +  E++  G++PD   +  +I G   +G  ++A + H +M E    P++ T + L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDS-----------------VTYNTLISSLCKER 409
           + GLC++G +  A+K F    L     D+                 V Y  LI  LC + 
Sbjct: 515 IDGLCKDGRISDAIKLF----LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+  A    S+M    L PD +T   I      +  L +     + +++ G I +  V  
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYR 630

Query: 470 NTSKTPEE 477
             +K  EE
Sbjct: 631 VLAKGYEE 638



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 223/468 (47%), Gaps = 48/468 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY T++D   ++G   +   L  +M ++ + P    Y IL+ G C    
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT--- 117
           + EA  +   M  +  LP+++TYN +++G+C    +++A  L  EM    LLP+VVT   
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303

Query: 118 --------------------------------YNTLINRFFESGRSMEAFKLIDELDEHG 145
                                           YN LI+ + ++G   EA  L  E+++H 
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I P+  T++I+IK  C   ++++A  +++ M++ GF P+ VTYNTLID  CK GNME+A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +   M  KG++ N IT +T++   C   K++ A  L      +G   D V+Y  LI G+
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML------------ 313
           F+D     A +L  EM+E  + P+ FT + +I GL + G+   AI +             
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSK 543

Query: 314 -NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            NEL +S   P+   +  +I G C++G++ KA +F + M     +PD+ TC +++ G  R
Sbjct: 544 TNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              L   +      +  G   +S  Y  L     +   L+ A     E
Sbjct: 604 AMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 265/575 (46%), Gaps = 57/575 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G LP+ VT+  ++D L K  ++   R  L DM   G+VPN   YN L+ GYCK G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +   + +++ LPDV+TY++LI G C    +EEA  L +EM+    LP+ VTYNT
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G   +A ++  ++ E GI+PN +T + +I  YCK GK++ A  +   M   G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y  LID + K GN +EAFR+   M   GL  N  TL+ ++  LC + ++ +A 
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 241 MLL------NSASKRGYYLD-------EVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            L       ++   +   LD        V Y  LI G   D +  +A K + +M+   + 
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P  FT   +I G  ++      + +  ++L+ G+IP+ + +  +  G+   G ++ AL F
Sbjct: 589 PDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSF 648

Query: 348 HNKMVE----------------KSFKPDIVT----CNILLSGLCREGILEKALKFFRSWI 387
             + V+                  F+  +VT    C+   S L   GI    L ++   I
Sbjct: 649 CGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHS--SYLTAFGIHSFVLLWYFHTI 706

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           LK  +   +           ++R   A  L  +M+     PD  T     +A  + G L+
Sbjct: 707 LKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALD 766

Query: 448 EAQKFTSIMVETGK-----INHQVVQPNTSKTPEEIDPSS-----------ISYSEKINE 491
             +   + +   G      +N+ ++  N      EI  +             +++  I  
Sbjct: 767 MGEWIHAYIRHRGLDTDLCLNNSLI--NMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVG 824

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           H   G+ ++ALQ+F E ++     NK    N  NG
Sbjct: 825 HALHGQAEEALQLFTEMKET----NKRARKNKRNG 855



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 223/502 (44%), Gaps = 30/502 (5%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           K  ++P     N+++ G  K G      +V   M    + P+V TY  LI+G C  G   
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           +AFRL  EM   K+ P VV Y  LI       R  EA  +   +   G+ PN  T+N M+
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
             YCK   + KA ++   M  +G  P+ VT+  LID  CK   M  A + +  M   G+ 
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N    N ++   C    L EA  L +   K     D  +Y  LI G    ++   A  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             EMK++  +P+  TYN +I G  + G  E+AI++ +++ + G+ P+  TF+T+I G+C 
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G++E A+  + +MV K   PD+V    L+ G  ++G  ++A +  +     G   +  T
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510

Query: 398 YNTLISSLCKERRLEDAFGLL-------------SEMEEKKLGPDRYTYAAIHTALVESG 444
            + LI  LCK+ R+ DA  L              +E++     P+   Y A+   L   G
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           R+ +A KF S M  +G                 + P   +    I  H      +D + +
Sbjct: 571 RIFKASKFFSDMRCSG-----------------LRPDVFTCIVIIQGHFRAMHLRDVMML 613

Query: 505 FEETRQKGIAINKSTYMNLMNG 526
             +  + GI  N S Y  L  G
Sbjct: 614 QADILKMGIIPNSSVYRVLAKG 635



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 220/440 (50%), Gaps = 23/440 (5%)

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
            F +   +ES K  P+V  +  LI  F E G   EA  +  ++D   + P     N+++ 
Sbjct: 112 VFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLD 166

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
              K+G+ D   K+  +M   G SP+ VTY TLID  C+ G+  +AFR+ D M  K +  
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
             +    ++  LC E ++ EA  +  +    G   +  +Y T++ GY +     +AL+L+
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            EM    ++P+  T+  +I GL ++ +   A   L ++   G++P+   +N +I G+C  
Sbjct: 287 XEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G + +AL  H+++ +    PD+ T +IL+ GLC    +E+A    +    KG   ++VTY
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           NTLI   CKE  +E A  + S+M EK + P+  T++ +     ++G++E A    + MV 
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G +                 P  ++Y+  I+ H   G  K+A ++ +E ++ G+  N  
Sbjct: 467 KGLL-----------------PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 519 TYMNLMNGLIKRRKSISKAV 538
           T   L++GL K  + IS A+
Sbjct: 510 TLSCLIDGLCKDGR-ISDAI 528



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 102/491 (20%), Positives = 182/491 (37%), Gaps = 125/491 (25%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD V Y  ++D  FK G   E   L  +M++ GL PN  T + L+ G CK G + +A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 65  MRVV------------------DLMTQNKSL----------------------------- 77
           +++                    L + N  +                             
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 78  -PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
            PDV+T  ++I G   A  L +   L+ ++  + ++P+   Y  L   + ESG    A  
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALS 647

Query: 137 LIDE----LDEHGIKP------------NAVT---------------HNIMIKWYCK--- 162
              E    LD    +P              VT               H+ ++ WY     
Sbjct: 648 FCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTIL 707

Query: 163 -------------------EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
                              + + +KA ++ R M+ +   PD VT    + A    G ++ 
Sbjct: 708 KPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDM 767

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
              +   +  +GL  +    N++++      ++  A  L +   K+    D  ++ ++I 
Sbjct: 768 GEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIV 823

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           G+    +A  AL+L+ EMKE          N       ++G+ E ++          ++P
Sbjct: 824 GHALHGQAEEALQLFTEMKET---------NKRARKNKRNGEXESSL----------VLP 864

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILLSGLCREGILEKALKF 382
           ++ TF  ++      G VE+  Q    M E  S +P I     ++  LCR G+L +A +F
Sbjct: 865 NDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEF 924

Query: 383 FRSWILKGKAV 393
                ++  AV
Sbjct: 925 ILKMPVRPNAV 935



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 24/210 (11%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT    L A    G L+    + + ++ +GL  +    N L++ Y K G +  A R+
Sbjct: 747 PDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRL 806

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM----------------ESLKL 111
            D  TQ K   DV T+  +I G    G  EEA +L  EM                ES  +
Sbjct: 807 FD-GTQKK---DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLV 862

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDE-HGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           LP+ VT+  ++     +G   E  +    + E + ++P       M+   C+ G + +A 
Sbjct: 863 LPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAY 922

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + +  M      P+ V + TL+ A    G+
Sbjct: 923 EFILKMP---VRPNAVVWRTLLGACSLQGD 949


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 269/521 (51%), Gaps = 19/521 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ AL  +G++ +   +L +M ++G  P    Y++++   C+ G  + A+RV
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ +       DV   N+++N  C+ G +++A  L +++ S    PDVV+YN ++     
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R     +L++E+      PN VT N +I + C+ G  ++  +++  M E+G +PD   
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRM 299

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G+++ A  +++ M   GLK N +  NT+L  LC  ++ +E   LL    
Sbjct: 300 YATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +   LD+V++  L+  + ++   +R ++L ++M     MP   TY  +I G  + G  +
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLID 419

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G CS  +   A    ++M+++    + +T N L+
Sbjct: 420 EAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 479

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++E+A++  +  ++ G + D ++Y+T+I  L K  + ++A  LL+ M  K + 
Sbjct: 480 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539

Query: 428 PDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
           P+   Y++I +AL   GR+ +  Q F +I   T                  I   ++ Y+
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTT------------------IRSDAVLYN 581

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I+  C +G  + A++        G   N+STY  L+ GL
Sbjct: 582 AVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 228/424 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  FGC PD V+YN +L  L    +   V++L+ +M +    PN  T+N L+S  C+ G 
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +    V+  M ++   PD+  Y  +I+G C  G L+ A  +   M S  L P+VV YNT
Sbjct: 278 FERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNT 337

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     + R  E  +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M  +G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG 397

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY T+I+  CK G ++EA  ++  M   G K NTI+   +L  LC  ++  +A 
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   ++G  L+ +++ TLI    +     +A++L  +M      P   +Y+ +I GL
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 517

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GKT++A+++LN ++  GM P+   +++I      EG++ K +Q  + + + + + D 
Sbjct: 518 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDA 577

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N ++S LC+ G  E+A++F    +  G   +  TY  LI  L  E  +++A  +L+E
Sbjct: 578 VLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637

Query: 421 MEEK 424
           +  K
Sbjct: 638 LCSK 641



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 252/511 (49%), Gaps = 23/511 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+ IL+A  + G       +L D+  +G   +    N++++  C  G + +A
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKA 211

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNA---GMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + ++  +      PDV +YN ++ G C A   G ++E   L +EM  +   P++VT+NTL
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTFNTL 268

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+    +G      +++ ++ EHG  P+   +  +I   CKEG +  A +I+  M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ V YNTL+   C A   EE   ++  M  K   ++ +T N ++   C    +D    
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL      G   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL 
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            + +   A D++++++Q G   +  TFNT+I+  C +G VE+A++   +M+     PD++
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           + + ++ GL + G  ++AL+     + KG + +++ Y+++ S+L +E R+     +   +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           ++  +  D   Y A+ ++L + G  E A +F + MV +G +      PN S         
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV------PNES--------- 613

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             +Y+  I    S+G  K+A ++  E   KG
Sbjct: 614 --TYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 236/467 (50%), Gaps = 6/467 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC---KLGWL 61
           GC  D    N +L+A+  +G +++   LL D+   G  P+  +YN ++ G C   + G +
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +E M   + M +    P++ T+N LI+  C  G+ E    +  +M      PD+  Y T+
Sbjct: 247 QELM---EEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATI 303

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+   + G    A ++++ +  +G+KPN V +N ++K  C   + ++  +++  M +   
Sbjct: 304 IDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA M
Sbjct: 364 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL S +  G   + +SY  ++ G    E+   A  L  +M ++    +  T+N +I  L 
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G  EQAI++L ++L +G  PD  +++T+I G    G+ ++AL+  N MV K   P+ +
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             + + S L REG + K ++ F +        D+V YN +ISSLCK    E A   L+ M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
                 P+  TY  +   L   G ++EAQ+  + +   G +   +++
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMK 650



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 242/518 (46%), Gaps = 20/518 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN ++    + G+L   R L + +    + PN  TY  +V   C  G + +A+ V+D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +    P    Y++++   C  G    A R+ +++ +     DV   N ++N   + G   
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L+ +L   G +P+ V++N ++K  C   +     +++  M      P+ VT+NTLI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C+ G  E    ++  M   G   +     TI+  +C E  L  A+ +LN     G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V Y TL+ G    E+     +L  EM ++       T+N ++    Q+G  ++ I++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L ++L  G +PD  T+ T+I+GFC EG +++A+     M     KP+ ++  I+L GLC 
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
                 A       I +G  ++ +T+NTLI+ LCK+  +E A  LL +M      PD  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y+ +   L ++G+ +EA +  ++MV  G                 + P++I YS   +  
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKG-----------------MSPNTIIYSSIASAL 552

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             +GR    +Q+F+  +   I  +   Y  +++ L KR
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 590



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 203/390 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C P+ VT+NT++  L + G    V ++L+ M + G  P+   Y  ++ G CK G 
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK A  +++ M      P+V  YN L+ G C+A   EE   L  EM       D VT+N 
Sbjct: 313 LKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F ++G      +L++++  HG  P+ +T+  +I  +CKEG ID+A  ++++M   G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ ++Y  ++   C A    +A  +M  M ++G  +N IT NT+++ LC +  +++A 
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   D +SY T+I G  +  K + AL+L + M  + + P+T  Y+++   L
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+  + I M + +  + +  D   +N +I   C  G+ E+A++F   MV     P+ 
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKG 390
            T  IL+ GL  EG +++A +       KG
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 249/508 (49%), Gaps = 19/508 (3%)

Query: 7   LP-DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP ++VTY+ ++D+  K+G L+        M + G+      YN L++G+CK G L  A 
Sbjct: 389 LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAE 448

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M      P   T+  LI+G+C    +E+AF+L +EM   ++ P V T+  LI   
Sbjct: 449 FLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGL 508

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +    EA KL DE+ E  IKP  VT+N+MI+ YCK   +DKA +++ +M  NG  PD 
Sbjct: 509 CSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDT 568

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY  LI   C  G +  A   +D + +K LK+N +  + +LH  C + +L EA      
Sbjct: 569 YTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCE 628

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG  +D V +  LI G  + +   R   L  +M ++ + P +  Y +MI   S+ G 
Sbjct: 629 MIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGS 688

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            +++ + L+ ++     P+  T+   ++G C  G++++A     KM+  +  P+ VT   
Sbjct: 689 FKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGC 748

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            L  L +EG +++A       +LKG   ++ TYN LI   CK  RL +A  +LSEM E  
Sbjct: 749 FLDSLTKEGNMKEATDLHHE-MLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENG 807

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + PD  TY+ I      SG +  A +    M+  G                 ++P S+++
Sbjct: 808 IFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG-----------------VEPDSVAF 850

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGI 513
           +  I   C  G    A ++  +   +G+
Sbjct: 851 NLLIYGCCVNGALDKAFELRNDMLSRGL 878



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 257/519 (49%), Gaps = 17/519 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYN ++  L K G + E  ++   ++++GL  +  TY  LV G+C++    + + +++ 
Sbjct: 254 VTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNE 313

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +   +P     + L++G    G ++ A+ L  ++     LP++  YN LIN   +   
Sbjct: 314 MVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A  L   +    +  N VT++I+I  +CK G +D A      M E+G       YN+
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+ +CK G++  A  +   M  +GL+    T  T++   C + ++++A+ L    +++ 
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
                 ++  LI G     +   A KL+DEM ER+I P+  TYN MI G  ++   ++A 
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++L ++L +G++PD  T+  +I G CS G+V  A  F + + +K+ K + +  + LL G 
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C +G L +AL      I +G  +D V +  LI    K++ ++  FGLL +M ++ L PD 
Sbjct: 614 CGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDS 673

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y ++  A  + G  +++ +   +MV                  E+  P+ ++Y+  +N
Sbjct: 674 VIYTSMIDAYSKEGSFKKSGECLDLMV-----------------TEKCFPNVVTYTAFMN 716

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             C  G    A  +FE+     I+ N  TY   ++ L K
Sbjct: 717 GLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 255/530 (48%), Gaps = 18/530 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D VTY T++    +  + ++   L+++M + G VP     + LV G  K G +  A
Sbjct: 283 GLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSA 342

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +V  + +   LP+++ YN LIN  C    L++A  L K M S+ L  + VTY+ LI+ 
Sbjct: 343 YDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDS 402

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G    A      + E GI+     +N +I  +CK G +  A  +   M   G  P 
Sbjct: 403 FCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPT 462

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+ TLI   CK   +E+AF++   M  K +  +  T   +++ LC   ++ EA  L +
Sbjct: 463 ATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFD 522

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +R     EV+Y  +I GY +    ++A +L ++M    ++P T+TY  +I GL  +G
Sbjct: 523 EMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTG 582

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A D +++L +  +  +E  ++ ++HG+C +G++ +AL    +M+++    D+V   
Sbjct: 583 RVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHA 642

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L+ G  ++  +++     +    +G   DSV Y ++I +  KE   + +   L  M  +
Sbjct: 643 VLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTE 702

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           K  P+  TY A    L + G ++ A          G +  +++  N       I P+S++
Sbjct: 703 KCFPNVVTYTAFMNGLCKVGEIDRA----------GHLFEKMLTAN-------ISPNSVT 745

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           Y   ++    +G  K+A  +  E   KG+  N +TY  L+ G  K  + I
Sbjct: 746 YGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNILIRGFCKLGRLI 794



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 258/554 (46%), Gaps = 53/554 (9%)

Query: 14  NTILDALFKKGKLNE-VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           N++L  L  +G   + V +   +  KQ    +   ++ LV  Y +   + +A+ V+ LM 
Sbjct: 116 NSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLML 175

Query: 73  QNKSLPDVWTYNMLING----------W------CNAGMLEEAFRLRKEMESLKLLPD-- 114
            N  LP+V T + ++NG          W       NAG+  + +     + SL  L D  
Sbjct: 176 GNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFC 235

Query: 115 -----------------VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
                            +VTYN LI+   + G  +EA ++   L E G+K + VT+  ++
Sbjct: 236 RAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLV 295

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
             +C+  + D    ++  M E GF P     + L+D   K GN++ A+ ++  +GR G  
Sbjct: 296 LGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFL 355

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N    N +++ LC  + LD+A +L  +       L++V+Y  LI  + +    + A   
Sbjct: 356 PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESY 415

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           +  M E  I  + + YN++I G  + G    A  +  +++  G+ P  TTF T+I G+C 
Sbjct: 416 FGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCK 475

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           + QVEKA + + +M EK   P + T   L+ GLC    + +A K F   + +      VT
Sbjct: 476 DLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVT 535

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN +I   CK   ++ AF LL +M    L PD YTY  + + L  +GR+  A+ F   + 
Sbjct: 536 YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL- 594

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
                 H+          + +  + + YS  ++ +C QGR  +AL    E  Q+GI ++ 
Sbjct: 595 ------HK----------KNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL 638

Query: 518 STYMNLMNGLIKRR 531
             +  L++G +K++
Sbjct: 639 VCHAVLIDGAMKQQ 652



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 219/424 (51%), Gaps = 1/424 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+ T++    K  ++ +   L  +M ++ + P+  T+  L+ G C    + EA
Sbjct: 458 GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D M + K  P   TYN++I G+C A  +++AF L ++M    L+PD  TY  LI+ 
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +GR   A   ID+L +  +K N + ++ ++  YC +G++ +A      M + G + D
Sbjct: 578 LCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMD 637

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V +  LID   K  +M+  F ++  M  +GL+ +++   +++     E    ++   L+
Sbjct: 638 LVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLD 697

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                  + + V+Y   + G  +  + +RA  L+++M    I P++ TY   +  L++ G
Sbjct: 698 LMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEG 757

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A D+ +E+L+ G++ +  T+N +I GFC  G++ +A +  ++M E    PD +T +
Sbjct: 758 NMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYS 816

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++   CR G +  A++ + + + KG   DSV +N LI   C    L+ AF L ++M  +
Sbjct: 817 TIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876

Query: 425 KLGP 428
            L P
Sbjct: 877 GLKP 880



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 192/392 (48%), Gaps = 10/392 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VTYN +++   K   +++  +LL DM   GLVP+  TY  L+SG C  G +  A   
Sbjct: 531 PTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDF 590

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D + +     +   Y+ L++G+C  G L EA     EM    +  D+V +  LI+   +
Sbjct: 591 IDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMK 650

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                  F L+ ++ + G++P++V +  MI  Y KEG   K+ + +  M      P+ VT
Sbjct: 651 QQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVT 710

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y   ++  CK G ++ A  + + M    +  N++T    L +L  E  + EA  L +   
Sbjct: 711 YTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML 770

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   +  +Y  LI G+ +  +   A K+  EM E  I P   TY+ +I+   +SG   
Sbjct: 771 K-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVG 829

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP--------- 358
            A+++ + +L+ G+ PD   FN +I+G C  G ++KA +  N M+ +  KP         
Sbjct: 830 AAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKR 889

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           D+  CN L+ G C  G ++ AL+ + S + + 
Sbjct: 890 DLGVCNFLMHGGCVTGEVDTALRLYHSMLTRA 921



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 185/362 (51%), Gaps = 10/362 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  TY  ++  L   G+++  +D + D+ K+ L  N   Y+ L+ GYC  G L EA
Sbjct: 563 GLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEA 622

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M Q     D+  + +LI+G      ++  F L K+M    L PD V Y ++I+ 
Sbjct: 623 LSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDA 682

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G   ++ + +D +      PN VT+   +   CK G+ID+A  +   M     SP+
Sbjct: 683 YSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPN 742

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY   +D+  K GNM+EA  +   M  KGL  NT T N ++   C   +L EA  +L+
Sbjct: 743 SVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNILIRGFCKLGRLIEATKVLS 801

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G + D ++Y T+I  + R      A++LWD M  + + P +  +N +I+G   +G
Sbjct: 802 EMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNG 861

Query: 305 KTEQAIDMLNELLQSGMIP---------DETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
             ++A ++ N++L  G+ P         D    N ++HG C  G+V+ AL+ ++ M+ ++
Sbjct: 862 ALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRA 921

Query: 356 FK 357
            K
Sbjct: 922 VK 923



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 129/259 (49%), Gaps = 12/259 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+V Y +++DA  K+G   +  + L  M  +   PN  TY   ++G CK+G +  A
Sbjct: 668 GLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRA 727

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLIN 123
             + + M      P+  TY   ++     G ++EA  L  EM  LK LL +  TYN LI 
Sbjct: 728 GHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM--LKGLLANTATYNILIR 785

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + GR +EA K++ E+ E+GI P+ +T++ +I  +C+ G +  A ++   M   G  P
Sbjct: 786 GFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI---------TLNTILHTLCCEK 234
           D V +N LI   C  G +++AF + + M  +GLK   I           N ++H  C   
Sbjct: 846 DSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTG 905

Query: 235 KLDEAYMLLNSASKRGYYL 253
           ++D A  L +S   R   L
Sbjct: 906 EVDTALRLYHSMLTRAVKL 924



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 148/363 (40%), Gaps = 42/363 (11%)

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           V  NTL D+         A R  + +G  K +   T +   ++H L   K    A  LL+
Sbjct: 68  VLINTLHDSKL-------ALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLH 120

Query: 245 SASKRGY-----------------YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           +   RG                  +   + +  L+  Y ++ +   A+ +   M    ++
Sbjct: 121 TLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLL 180

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P   T +A++ GL +  K     ++ +E + +G+ PD  T + +I   C      +A + 
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEK 240

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M    F   IVT N+L+ GLC+ G + +AL+  +S   KG   D VTY TL+   C+
Sbjct: 241 ILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCR 300

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            ++ +D   L++EM E    P     + +   L + G ++ A     ++V+ G+      
Sbjct: 301 VQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAY---DLVVKLGRFGFL-- 355

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                       P+   Y+  IN  C       A  +++      + +N  TY  L++  
Sbjct: 356 ------------PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSF 403

Query: 528 IKR 530
            KR
Sbjct: 404 CKR 406


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 229/461 (49%), Gaps = 1/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M      PD  T+ T++    ++G +     + + M + G  P R T N+L++GYCK+G 
Sbjct: 221 MSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGR 280

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+  +     +   PD  TYN  ++  C  G +  A ++   M      PDV TYNT
Sbjct: 281 VEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 340

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   ++G   EA  +++++ + G  P+  T N +I   C + ++++A  + R +   G
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  T+N LI+A CK G+     R+ + M   G   + +T N ++  LC   KL  A 
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G     V+Y T+I    +  +   A +++D+M    I  S  T+N +I GL
Sbjct: 461 DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGL 520

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + + A +++ ++++ G+ P   T+N+I+  +C +G ++KA      M    F+ D+
Sbjct: 521 CKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDV 580

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++GLC+ G  + ALK  R   +KG       YN +I SL +   L DA  L  E
Sbjct: 581 VTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFRE 640

Query: 421 MEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETG 460
           M E    PD  TY  +   L    G ++EA  F   MV  G
Sbjct: 641 MTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKG 681



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/507 (30%), Positives = 246/507 (48%), Gaps = 18/507 (3%)

Query: 25  KLNEVRDLLSD-MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           + ++  DL+ + +   G+  +   YN L++   +   +K    V + MT     PDV T 
Sbjct: 139 RFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTL 198

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N LI   C A  +  A  + +EM S  + PD  T+ TL+  F E G    A ++  ++ E
Sbjct: 199 NTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMME 258

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G  P  VT N++I  YCK G+++ A   ++    +GF PD VTYNT +   C+ G++  
Sbjct: 259 TGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSH 318

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A ++MD+M ++G   +  T NT+++ L    +LDEA  ++N    RG   D  ++ TLI 
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
                 +   AL L  E+  + + P  +T+N +I  L + G     I +  E+  SG  P
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           DE T+N +I   CS G++  AL    +M         VT N ++  LC++  +E+A + F
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                 G +  +VT+NTLI  LCK +R++DA  L+ +M ++ L P   TY +I T   + 
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G L++A      M   G                EID   ++Y   IN  C  GR + AL+
Sbjct: 559 GDLKKAADILETMTANGF---------------EID--VVTYGTLINGLCKAGRTQVALK 601

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKR 530
           +    R KGI      Y  ++  L +R
Sbjct: 602 LLRGMRIKGIRPTPKAYNPVIQSLFRR 628



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 256/536 (47%), Gaps = 17/536 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D   YN +L+ L +  ++  +  + ++M  +G+ P+  T N L+   C+   ++ 
Sbjct: 154 FGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRT 213

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +++ M+ +   PD  T+  L+ G+   G +E A R++ +M      P  VT N LIN
Sbjct: 214 AVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLIN 273

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + GR  +A   I +    G +P+ VT+N  +   C+ G +  A K++  M + G  P
Sbjct: 274 GYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDP 333

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYNT+I+   K G ++EA  +++ M  +G   +T T NT++  LC + +L+EA  L 
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLA 393

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +G   D  ++  LI    +    +  ++L++EMK     P   TYN +I  L   
Sbjct: 394 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSM 453

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK   A+D+L E+  +G      T+NTII   C + ++E+A +  ++M         VT 
Sbjct: 454 GKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTF 513

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC+   ++ A +     + +G    ++TYN++++  CK+  L+ A  +L  M  
Sbjct: 514 NTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTA 573

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
                D  TY  +   L ++GR + A K    M   G                 I P+  
Sbjct: 574 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG-----------------IRPTPK 616

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +Y+  I     +   +DAL +F E  + G   +  TY  +  GL +    I +A D
Sbjct: 617 AYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 672



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 247/545 (45%), Gaps = 54/545 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    Y  I+  L   G  + +  L+ +M+++G           V  Y +L    +A   
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDA--- 143

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           VDL                               +R ++ +  +  D   YN L+N   E
Sbjct: 144 VDL-------------------------------VRNQLNTFGVQADTAVYNHLLNVLAE 172

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             R      + +E+ + GI+P+ VT N +IK  C+  ++  A  ++  M  +  +PD  T
Sbjct: 173 GSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETT 232

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           + TL+    + G++E A R+   M   G     +T+N +++  C   ++++A   +    
Sbjct: 233 FTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+  D+V+Y T +    ++   + ALK+ D M +    P  FTYN +I  LS++G+ +
Sbjct: 293 ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 352

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  ++N+++  G +PD TTFNT+I   CS+ ++E+AL    ++  K   PD+ T NIL+
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILI 412

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC+ G     ++ F      G A D VTYN LI  LC   +L +A  LL EME     
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCP 472

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT---------------- 471
               TY  I  AL +  R+EEA++    M   G I+   V  NT                
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG-ISRSAVTFNTLIDGLCKAKRIDDATE 531

Query: 472 ---SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  E + PS+I+Y+  +  +C QG  K A  I E     G  I+  TY  L+NGL 
Sbjct: 532 LIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLC 591

Query: 529 KRRKS 533
           K  ++
Sbjct: 592 KAGRT 596



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW-LKE 63
           G  P    YN ++ +LF++  L +   L  +M + G  P+  TY I+  G C+ G  +KE
Sbjct: 610 GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKE 669

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           A   +  M     +P+  ++ ML  G  N GM
Sbjct: 670 AFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 701


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 260/525 (49%), Gaps = 21/525 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  T+N ++  L  KGK+ E   ++  +   G  P+  TY  L+ G+CK G L  A
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLA 256

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M ++   P+  TY+ LING C+ G LEEA  + +EM    + P V  Y   I  
Sbjct: 257 FEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVS 316

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GRS EA KL+ ++ + G  PN  T+  +I    ++GK + A  +   M  +G  P 
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY+ LI+     G  E A  + + M       NT T N I+   C    + +A  + +
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   + ++Y  +I  YF+    N A++L + MK   +   T+TY  +I G S+ G
Sbjct: 437 QMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGG 496

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  + NE+++ G+ P+  T+N II+G+ +  +V+ AL    KMVE    P   T N
Sbjct: 497 KLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYN 556

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++SG  +   + +A  F    + +G   + +TY + I  LCK  R   AF +  EM+++
Sbjct: 557 MMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR 616

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY+++   L + G+ E+A++    +++ G       +PN             +
Sbjct: 617 DYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDG------CEPNVD-----------T 655

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  +   C +GR  +A Q+ E  ++KG+  ++  Y  L+ G  K
Sbjct: 656 YTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCK 700



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 233/485 (48%), Gaps = 31/485 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P++VTY+ +++ L  +G+L E  D+L +M  +G+ P    Y I +   C  G   EA
Sbjct: 267 GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++++  M +    P+V TY  LI+G    G  E A  +  +M +  L+P  VTY+ LIN+
Sbjct: 327 VKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQ 386

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +  GR   A  + + +  H   PN  T+N++IK +C  G I KA  I   M + G SP+
Sbjct: 387 LYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPN 446

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN +I    K G M  A R++++M   GLK++T T   ++       KL+ A+ L N
Sbjct: 447 VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFN 506

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + V+Y  +I GY    K + AL L+ +M E   +PS+ TYN MI G S++ 
Sbjct: 507 EMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTN 566

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF-------- 356
           +  +A +   ++++ G++P+  T+ + I G C  G+   A +  ++M ++ +        
Sbjct: 567 RISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYS 626

Query: 357 -----------------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
                                  +P++ T   L+ GLC +G   +A +   S   KG   
Sbjct: 627 SLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQP 686

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
               Y  L+   CK   +E A  +   M      P    Y A+  AL ++   ++AQ   
Sbjct: 687 SEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMF 746

Query: 454 SIMVE 458
             M++
Sbjct: 747 QTMLK 751



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 211/420 (50%), Gaps = 4/420 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  VTY+ +++ L+ +G+      +   M     +PN  TYN+++ G+C +G++++A
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA 431

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M +    P+V TYN++I+ +   G +  A RL + M+   L  D  TY  LI+ 
Sbjct: 432 TAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISG 491

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G+   AF L +E+ EHGI PN VT+N +I  Y    K+D A  +   M E+G  P 
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPS 551

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN +I    K   + EA      M ++GL  N IT  + +  LC   +   A+ + +
Sbjct: 552 SGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFH 611

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              KR Y+ +  +Y +LI G  ++ +A  A +L D+  E    P+  TY  ++ GL   G
Sbjct: 612 EMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCE----PNVDTYTTLVRGLCGKG 667

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A  ++  + + G+ P E  +  ++ G C   +VE AL+  + MV   F+P +    
Sbjct: 668 RCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYK 727

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  LC+    +KA   F++ + K    D V +  L+  L KE   + +  LL  ME +
Sbjct: 728 ALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 224/456 (49%), Gaps = 4/456 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++  L + GK      +   M   GLVP   TY+ L++     G 
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+ + + M  + SLP+  TYN++I G+C+ G +++A  +  +M      P+V+TYN 
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ +F+ G    A +L++ +  +G+K +  T+  +I  + + GK++ A  +   M E+G
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ VTYN +I+       +++A  +   M   G   ++ T N ++       ++ EA 
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  K+G   + ++Y + I G  ++ + + A K++ EMK+R   P+  TY+++I GL
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+ E A      LL  G  P+  T+ T++ G C +G+  +A Q    M +K  +P  
Sbjct: 633 CQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSE 688

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                LL G C+   +E ALK F S +  G       Y  LI +LCK    + A  +   
Sbjct: 689 EIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQT 748

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           M +K    D   +  +   L++ G  + + +   +M
Sbjct: 749 MLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVM 784



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 203/398 (51%), Gaps = 18/398 (4%)

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           E+   GI+PN  T N MIK  C +GK+ +A  I+ ++   G  PD  TY +LI  +CK G
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           N++ AF M D M + G   N++T + +++ LC E +L+EA  +L     +G      +Y 
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
             I       ++  A+KL  +MK+R   P+  TY A+I GLS+ GK E AI + +++L  
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G++P   T++ +I+    EG+ E AL     M+     P+  T N+++ G C  G ++KA
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA 431

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
              F   +  G + + +TYN +I    K+  + +A  LL  M+   L  D +TYA + + 
Sbjct: 432 TAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISG 491

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
               G+LE A    + MVE G                 I P+ ++Y+  IN + +  +  
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHG-----------------ISPNVVTYNAIINGYLTVAKVD 534

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           DAL +F +  + G   +  TY  +++G  K  + IS+A
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNR-ISEA 571



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 214/429 (49%), Gaps = 17/429 (3%)

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           EM +  + P++ T+N +I      G+  EA  ++  +  +G  P+  T+  +I  +CK G
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
            +D A ++   M ++G  P+ VTY+ LI+  C  G +EEA  M++ M  KG++       
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
             + +LC   +  EA  LL    KRG   +  +Y  LI+G  RD K   A+ ++ +M   
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            ++P+  TY+A+I  L   G+ E A+ +   +L    +P+  T+N II GFCS G ++KA
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA 431

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
               ++M++    P+++T NI++    ++G +  A++        G  +D+ TY  LIS 
Sbjct: 432 TAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISG 491

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
             +  +LE AF L +EM E  + P+  TY AI    +   ++++A      MVE+G +  
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV-- 549

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                          PSS +Y+  I+      R  +A     +  ++G+  N  TY + +
Sbjct: 550 ---------------PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 525 NGLIKRRKS 533
           +GL K  ++
Sbjct: 595 DGLCKNGRT 603



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 182/387 (47%), Gaps = 34/387 (8%)

Query: 155 IMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           +MIK    EG++ +  +++  +     F     +++TL+    + G  +     MD +GR
Sbjct: 136 LMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLL---IQLGKFD-----MDGLGR 187

Query: 214 --------KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
                    G++ N  T N ++  LC + K+ EA +++      G   D  +Y +LI G+
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++   + A +++D M +    P++ TY+A+I GL   G+ E+A+DML E++  G+ P  
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
             +   I   C  G+  +A++   KM ++   P++ T   L+SGL R+G  E A+  +  
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +  G    +VTY+ LI+ L  E R E A  +   M      P+  TY  I       G 
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +++A      M++ G                   P+ I+Y+  I+ +  QG   +A+++ 
Sbjct: 428 IQKATAIFDQMLKAGP-----------------SPNVITYNIIIHIYFKQGYMNNAMRLL 470

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRK 532
           E  +  G+ ++  TY NL++G  +  K
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGK 497



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 4/250 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P + TYN ++    K  +++E  +    M KQGL+PN  TY   + G CK G    A
Sbjct: 547 GNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLA 606

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   M +    P++ TY+ LI+G C  G  E+A RL  +       P+V TY TL+  
Sbjct: 607 FKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRG 662

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA +L++ + + G++P+   +  ++   CK  +++ A KI  +M   GF P 
Sbjct: 663 LCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPC 722

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  LI A CKA   ++A  M   M +K    + +    +L  L  E + D +  LL+
Sbjct: 723 LSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLH 782

Query: 245 SASKRGYYLD 254
               R   L+
Sbjct: 783 VMESRNCTLN 792



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 30/277 (10%)

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
           T +F+ + +     L   +++R  +P+      MI      G+ ++ I +L+E      I
Sbjct: 104 THFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSE------I 157

Query: 323 PDETTFNTIIHGFCSE----GQVEK---ALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
                F   ++ F +     G+ +        + +M+    +P++ T N ++  LC +G 
Sbjct: 158 NTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGK 217

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +++A          G   D+ TY +LI   CK   L+ AF +   M +    P+  TY+A
Sbjct: 218 VQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSA 277

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L   GRLEEA      M++ G                 I+P+  +Y+  I   C  
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMIDKG-----------------IEPTVHAYTIPIVSLCDA 320

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           GR  +A+++  + +++G   N  TY  L++GL +  K
Sbjct: 321 GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGK 357



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TY T++  L  KG+  E   L+  MKK+GL P+   Y  L+ G CK   ++ A
Sbjct: 648 GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESA 707

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++ D M      P +  Y  LI   C A   ++A  + + M       D V +  L++ 
Sbjct: 708 LKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDG 767

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
             + G +  + +L+  ++      N  T  ++ +
Sbjct: 768 LLKEGETDLSLELLHVMESRNCTLNFQTRVMLAR 801


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 229/447 (51%), Gaps = 1/447 (0%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L A  +K K  E  DL  +       P+  TY+ L++G+CK    ++A R++D M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
              +P    YN +I G C+ G ++ A    ++M+     P V+TY  L++   +S R  +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  +++++ E G  PN VT+N +I  +CK G +D+A  +   M EN  SPD  TYN LID
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK    ++  +++  M + G + N IT NT++ +L    K  +A+ L     +R    
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
              ++  +I  + +  + + A +L+  M +R  +P  +TYN MI G  ++ + + A  +L
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             + ++G  PD  T+N+I+ G C   QV++A + +  +    +  D+VTC+ L+ GLC+ 
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             L+ A K  R     G A D V Y  LI   CK  +L+ +    SEM +K   P   TY
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETG 460
           + +   L +S R+ +       M+E G
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 222/419 (52%), Gaps = 1/419 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD++TY+T+++   K     +   LL +M+K+G+VP+   YN ++ G C  G +  A+
Sbjct: 29  CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 88

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                M Q    P V TY +L++  C +  + +A  + ++M      P+VVTYNTLIN F
Sbjct: 89  VHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G   EA  L +++ E+   P+  T+NI+I  YCK+ +     K+++ M + G  P+ 
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 207

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TYNTL+D+  K+G   +AF +  +M R+  K +  T N ++   C   +LD AY L   
Sbjct: 208 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            + RG   D  +Y  +I+G  R  + + A +L + M E    P   TYN+++ GL ++ +
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A ++   L   G   D  T +T+I G C   +++ A +   +M      PD+V   I
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           L+ G C+   L+K+L FF   + KG     +TY+ +I  LCK  R+ D   LL  M E+
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 198/388 (51%), Gaps = 34/388 (8%)

Query: 1   MEGFGCLPDNVTYNTIL----------------------------------DALFKKGKL 26
           ME  G +P N  YNTI+                                  DAL K  ++
Sbjct: 59  MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARI 118

Query: 27  NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNML 86
           ++   +L DM + G  PN  TYN L++G+CKLG + EA+ + + M +N   PDV+TYN+L
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           I+G+C     ++  +L +EM      P+ +TYNTL++   +SG+ ++AF L   +     
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           KP+  T N+MI  +CK G++D A ++ + M + G  PD  TYN +I   C+A  +++A +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +++ M   G   + +T N+I+  LC   ++DEAY +       GY+LD V+  TLI G  
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  + + A KL  EM+     P    Y  +I G  ++ + ++++   +E+L  G +P   
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 418

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           T++ +I   C   +V         M+E+
Sbjct: 419 TYSIVIDKLCKSARVRDGCMLLKTMLER 446



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 218/449 (48%), Gaps = 18/449 (4%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N L++ +      +EA+ L K        PD +TY+TLIN F ++    +A++L+DE+++
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            GI P+   +N +IK  C  G++D A    R+M+ +  +P  +TY  L+DA CK+  + +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHC-APSVITYTILVDALCKSARISD 120

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A  +++ M   G   N +T NT+++  C    +DEA +L N   +     D  +Y  LI 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           GY + E+     KL  EM +    P+  TYN ++  L +SGK   A ++   +L+    P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
              TFN +I  FC  GQ++ A +    M ++   PDI T NI++SG CR   ++ A +  
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                 G   D VTYN+++S LCK  ++++A+ +   +       D  T + +   L +S
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            RL++A+K    M   G                   P  ++Y+  I+  C   +   +L 
Sbjct: 361 RRLDDAEKLLREMERNGSA-----------------PDVVAYTILIHGFCKADQLDKSLA 403

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            F E   KG      TY  +++ L K  +
Sbjct: 404 FFSEMLDKGCVPTVITYSIVIDKLCKSAR 432



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 175/317 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYNT+++   K G ++E   L + M +    P+  TYNIL+ GYCK    ++ 
Sbjct: 132 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 191

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +    P+  TYN L++    +G   +AF L + M      P   T+N +I+ 
Sbjct: 192 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 251

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+   A++L   + + G  P+  T+NIMI   C+  +ID A +++  M E G  PD
Sbjct: 252 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 311

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+++   CKA  ++EA+ + +V+   G  ++ +T +T++  LC  ++LD+A  LL 
Sbjct: 312 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 371

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D V+Y  LI G+ + ++ +++L  + EM ++  +P+  TY+ +I  L +S 
Sbjct: 372 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431

Query: 305 KTEQAIDMLNELLQSGM 321
           +      +L  +L+ G+
Sbjct: 432 RVRDGCMLLKTMLERGV 448



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 143/250 (57%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC P+ +TYNT++D+L K GK  +  +L   M ++   P+  T+N+++  +CK+G 
Sbjct: 198 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 257

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  +  LMT    LPD++TYN++I+G C A  +++A +L + M      PDVVTYN+
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   ++ +  EA+++ + L   G   + VT + +I   CK  ++D A K++R ME NG
Sbjct: 318 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD V Y  LI   CKA  ++++      M  KG     IT + ++  LC   ++ +  
Sbjct: 378 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 437

Query: 241 MLLNSASKRG 250
           MLL +  +RG
Sbjct: 438 MLLKTMLERG 447



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 18/241 (7%)

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N ++    +  K ++A D+    L     PD  T++T+I+GFC     ++A +  ++M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +   P     N ++ GLC  G ++ AL  +R  + +  A   +TY  L+ +LCK  R+ D
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRHCAPSVITYTILVDALCKSARISD 120

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  +L +M E    P+  TY  +     + G ++EA    + M+E               
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-------------- 166

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                 P   +Y+  I+ +C Q R +D  ++ +E  + G   N  TY  LM+ L+K  K 
Sbjct: 167 ---SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 223

Query: 534 I 534
           I
Sbjct: 224 I 224



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 18/167 (10%)

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           CN LLS   R+   ++A   F++ +    + DS+TY+TLI+  CK R  + A+ LL EME
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++ + P    Y  I   L ++GR           V++  ++++ +Q + +       PS 
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGR-----------VDSALVHYRDMQRHCA-------PSV 102

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+Y+  ++  C   R  DA  I E+  + G A N  TY  L+NG  K
Sbjct: 103 ITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 176/670 (26%), Positives = 290/670 (43%), Gaps = 156/670 (23%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP--------------------- 43
           GCL D VT+ T+++AL   GKL+E  +L  +M ++G  P                     
Sbjct: 189 GCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEA 248

Query: 44  --------------NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING 89
                         +R  YN L+ GYCKLG + + ++++  M +  + PD+ TYN+L+ G
Sbjct: 249 NEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAG 308

Query: 90  WCNAGMLEEAFRLRKEMESLKLLP-----------------------------DVVTYNT 120
           +  A  L++A  L K + S    P                             DV++Y T
Sbjct: 309 FSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTT 368

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAV----------------------------- 151
           +I    +S R  EA +L ++L   G  PN V                             
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428

Query: 152 ------THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                 T+ ++I   CK   +  ACK+   M + G  PD +TY TLID   KA  M+EA 
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLC-------------------CEKKL---------- 236
           +++DVM  KG +   +T  +I+H  C                   CE  L          
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548

Query: 237 ------DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
                 +EAY +L   + RG   D + Y +LI   F   +   A  ++D M E+   P  
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TY  +I   S+ G  E A ++L  + +SG+ PD   +N+++ G+    +V++A   +++
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS-VTYNTLISSLCKER 409
           MV    KP+ VT N+L+ GL ++G  ++A   F+  + K +   + V+Y  LI  L K  
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+ +AF    EM ++ + P+ +TY ++  +L ++GR+ EA+K    MV+ G         
Sbjct: 729 RVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG--------- 779

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   ++P   +YS  I           A  +F+E  ++G A N+ TY  L  G   
Sbjct: 780 --------VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF-- 829

Query: 530 RRKSISKAVD 539
             ++  +A+D
Sbjct: 830 --RAAGRALD 837



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 258/493 (52%), Gaps = 11/493 (2%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D ++Y T++  L    +++E  +L   +K  G  PN   Y  ++ G  K G +++ ++  
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M+ +  +P   TY ++I+G C A ML +A ++ ++M     +PD +TY TLI+ F ++
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 481

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +  EA KL+D +   G +P AVT+  ++  +CK   I++A +++  M E G  P    +
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            +L+      G  EEA++++  M  +G   + I   +++  L    ++ EA  + +S  +
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 601

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D ++YGT+I  + +      A ++ + M +  + P  F YN+++ G  +  + +Q
Sbjct: 602 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 661

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILL 367
           A  + + ++ SG+ P+  TFN ++HG   +G+ ++A     +M+EK    P +V+  IL+
Sbjct: 662 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL + G + +A   F+  I +G   +  TY +LI SL K  R+ +A  L+ +M +  + 
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPEEIDPSSI 483
           PD   Y+A+ T L++S  ++ A      M++ G    ++ ++V++         +D    
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD---- 837

Query: 484 SYSEKINEHCSQG 496
              E + +H SQG
Sbjct: 838 --LEAVKQHFSQG 848



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 260/550 (47%), Gaps = 33/550 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P  V+YNT++  L    K++E     + M   G  P+   +  L+ G+CK G 
Sbjct: 46  MPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ 105

Query: 61  LKEAMRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
            +     V  M  N++L    PDV+ Y  +I+G+C AG L+  F++ +EM +   +PD  
Sbjct: 106 PQ-----VGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAA 160

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            Y  LI+   + GR  EA++L + + + G   + VT   +I+     GK+D+AC++ R M
Sbjct: 161 AYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
            E G+ P     ++LI A CKAG ++EA  +   +  K +  + +  N+++   C   ++
Sbjct: 221 IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRV 280

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+   LL    +   + D  +Y  L+ G+ R  + + AL+L+  +      P+  TY  +
Sbjct: 281 DDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTI 340

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I GL  + + E+A    +E L      D  ++ T+I G     ++++A +   K+     
Sbjct: 341 IQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGC 394

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P++V    ++ GL + G +E  LK F             TY  +I  LCK + L DA  
Sbjct: 395 SPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 454

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM---------VETGKINHQVV 467
           +  +M +K   PD  TY  +     ++ +++EA+K   +M         V  G I H   
Sbjct: 455 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 514

Query: 468 QPNTSKTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
           + +     +E+         +P    ++  ++ + S+GR ++A Q+  E   +G A +  
Sbjct: 515 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 574

Query: 519 TYMNLMNGLI 528
            Y +L++ L 
Sbjct: 575 LYTSLIDLLF 584



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 211/402 (52%), Gaps = 1/402 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G  C+P   TY  ++D L K   L +   +   M ++G VP+  TY  L+ G+ K   
Sbjct: 424 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +++D+M      P   TY  +++G+C   M+ EA  +  +M      P +  + +
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +   GR+ EA++++ E+   G  P+ + +  +I      G++ +A  +  +M E G
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 603

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD +TY T+I    K GN+E A  ++++M + G+  +    N+++      +++D+A+
Sbjct: 604 CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 663

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER-QIMPSTFTYNAMIWG 299
            + +     G   + V++  L+ G F+D K +RA  L+ EM E+ ++ P+  +Y  +I G
Sbjct: 664 GVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDG 723

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+  +A     E++  G+IP+  T+ ++I+     G++ +A +    MV+    PD
Sbjct: 724 LGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 783

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           +   + L++GL    +++ A   F+  + +G A + VTY  L
Sbjct: 784 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 246/509 (48%), Gaps = 28/509 (5%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
           + E  D L +M   GL+P+    NI+++G CK   + +A+ +   M      P + +YN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           +I+G  +   ++EA++    M      PDV+ + TLI+ F ++G+      L+++  +  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
            +P+   +  +I  YCK G +D   KI+  M   G  PD   Y  LID  CK G ++EA+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY--YLDEVSYGTLIT 263
            + + M + G   + +T  T++  L    KLDEA  L     +RGY  YL EV   +LI 
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYL-EVQ-DSLIF 237

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              +  K + A +++  +  +++  S   YN+++ G  + G+ +  + +L ++++    P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D  T+N ++ GF    +++ AL+    +     KP+  T   ++ GL     +E+A  FF
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                  +A+D ++Y T+I  L   +R+++A  L  +++     P+   Y A+   L+++
Sbjct: 358 D------EALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKA 411

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           GR+E+  K    M  +  +                 P+  +Y+  I+  C      DA +
Sbjct: 412 GRIEDGLKNFEDMSGSSCV-----------------PTRTTYTVVIDGLCKAQMLPDACK 454

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +FE+  QKG   +  TY  L++G  K  K
Sbjct: 455 VFEQMVQKGCVPDTITYTTLIDGFSKASK 483


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 229/424 (54%), Gaps = 11/424 (2%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V Y+ I+D L K G   + +++ ++M ++G+ PN  TYN ++ GYC  G   +A +++  
Sbjct: 81  VIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRD 140

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    PDV T++ LIN +   G +  A  L +EM    + P  +TY+++I+ F +  R
Sbjct: 141 MIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSR 200

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMI-----------KWYCKEGKIDKACKIVRNMEEN 179
             +A  + D +   G  P+ +T N +I             +C+ G ++ A  + + M  N
Sbjct: 201 LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN 260

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G SPD VT NTL+   C+ G +E+A  M  V  +  + ++T T N I++ +C   K+DEA
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + L NS    G   D V+Y  LI  + ++    RA  ++ EM  + I+PST TYN+M+ G
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             +  + E+A  M++ ++  G  PD  TF+T+I G+C  G+V+  L+  ++M ++    D
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVAD 440

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +T N L+ G C+ G L  A   F   +  G   D++T+ ++++ LC +  L+    +L 
Sbjct: 441 TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500

Query: 420 EMEE 423
           ++++
Sbjct: 501 DLQK 504



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 250/506 (49%), Gaps = 28/506 (5%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M + G   N  T+  L++G C+ G + +A+ +VD M +    PD  TY  ++NG C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
              A  + ++M+  ++  +VV Y+ +++R  + G  ++A  +  E+ E GI PN +T+N 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           MI  YC  GK   A +++R+M E    PD VT++ LI+A  K G +  A  +   M R+ 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK----- 270
           +   TIT ++++   C   +L++A  + +    +G   D ++  TLI G  R ++     
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 271 ------ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                  N A  L+ EM    + P   T N ++ GL ++GK E+A++M     +S M  D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T N II+G C   +V++A    N +     + D+VT NIL+    +EG   +A   + 
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + KG    +VTYN+++   CK+ RLE+A  ++  M  +   PD  T++ +     ++G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           R+++  +  S M + G +                   +I+Y+  I+  C  G    A  I
Sbjct: 421 RVDDGLELFSEMCQRGLV-----------------ADTITYNALIHGFCKVGDLNGAQDI 463

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
           FEE    G+  +  T+ +++ GL  +
Sbjct: 464 FEEMVSSGVCPDTITFRSMLAGLCTK 489



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 178/358 (49%), Gaps = 46/358 (12%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT++ +++A  K+GK++   +L  +M ++ + P   TY+ ++ G+CK   L++A  +
Sbjct: 148 PDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHM 207

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNA-----------GMLEEAFRLRKEMESLKLLPDVV 116
            DLM      PD+ T N LI+G C A           G +  A  L +EM S  + PD+V
Sbjct: 208 FDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIV 267

Query: 117 TYNTLINRFFESGR---SMEAFK--------------------------------LIDEL 141
           T NTL+    E+G+   ++E FK                                L + L
Sbjct: 268 TCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSL 327

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
             +G++ + VT+NI+I  + KEG   +A  I   M   G  P  VTYN+++D  CK   +
Sbjct: 328 PVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRL 387

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           EEA +M+D M  +G   + +T +T++   C   ++D+   L +   +RG   D ++Y  L
Sbjct: 388 EEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNAL 447

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           I G+ +    N A  +++EM    + P T T+ +M+ GL    + ++ + ML +L +S
Sbjct: 448 IHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 127/244 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT NT+L  L + GKL +  ++    +K  +  +  T NI+++G CK   + EA
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + +  N    DV TYN+LI  +   G    A  +  EM    ++P  VTYN++++ 
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  R  EA +++D +   G  P+ VT + +IK YCK G++D   ++   M + G   D
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVAD 440

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI   CK G++  A  + + M   G+  +TIT  ++L  LC + +L +   +L 
Sbjct: 441 TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500

Query: 245 SASK 248
              K
Sbjct: 501 DLQK 504



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 17/254 (6%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M E     +  T+  ++ GL + G+  QA+ +++ +++ G  PD  T+ TI++G C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
              AL    KM E   K ++V  + ++  LC++G   KA   F     KG   + +TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +I   C   +  DA  LL +M E+ + PD  T++A+  A V+ G++  A++    M+   
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR-- 178

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            I P++I+YS  I+  C   R +DA  +F+    KG + +  T 
Sbjct: 179 ---------------RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITL 223

Query: 521 MNLMNGLIKRRKSI 534
             L++G  + ++ +
Sbjct: 224 NTLIDGCCRAKRHL 237



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 96/175 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D VTYN ++    K+G      D+  +M  +G++P+  TYN +V G+CK   L+EA
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++VD M      PDV T++ LI G+C AG +++   L  EM    L+ D +TYN LI+ 
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHG 450

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           F + G    A  + +E+   G+ P+ +T   M+   C + ++ K   ++ +++++
Sbjct: 451 FCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 254/536 (47%), Gaps = 24/536 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY T++D L K    +    +   M   G  PN  TYN L+ GY  +G  KE 
Sbjct: 229 GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEV 288

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++++ M+     PD +TY  L+N  C  G   EA      M    + P V TY  LI+ 
Sbjct: 289 VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHG 348

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   E    +D + E+G+ P+    NI    Y K G IDKA  I   M ++G SP+
Sbjct: 349 YATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPN 408

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y  LIDA CK G +++A    + M  +G+  N +  N++++ LC   K + A  L+ 
Sbjct: 409 VVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVY 468

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   + V + TLI       +     +L D M+   + P  F+Y  +I G   +G
Sbjct: 469 EMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTG 528

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +T++A  + + ++  G+ P E T+NT++HG+CS  +++ A     +M+ K   P +VT N
Sbjct: 529 RTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYN 588

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +L GL +     +A + + + I  G   D  TYN +++ LCK   +++AF +   +  K
Sbjct: 589 TILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 648

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  +  T+  +  AL++ GR E+A    + +   G +                 P+ ++
Sbjct: 649 GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV-----------------PNVVT 691

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR---RKSISKA 537
           Y         +G  ++   +F    + G A N      ++N L++R   R  IS+A
Sbjct: 692 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNS----QMLNALVRRLLHRGDISRA 743



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 252/529 (47%), Gaps = 21/529 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY+ ++    + G L         + K G   +    N L+ G C    + EAM V
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 68  -VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTLIN 123
            +  M +   +PD  +Y +L+ G CN    EEA  L   M      +  P+VV+Y+ +IN
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF  G+  + + L  E+ + GI P+ VT+  +I   CK    D+A  + + M +NGF P
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN LI      G  +E  +M++ M  +GLK +  T  ++L+ LC   +  EA    
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  ++G      +YG LI GY      +      D M E  + P    +N      ++ 
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 387

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A+D+ N++ Q G+ P+   +  +I   C  G+V+ A    N+M+ +   P+IV  
Sbjct: 388 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 447

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC     E+A +     + +G   ++V +NTLI +LC   R+ +   L+  ME 
Sbjct: 448 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 507

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD ++Y  + +    +GR +EA+K    MV  G                 + P+ +
Sbjct: 508 VGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG-----------------LSPTEV 550

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +Y+  ++ +CS  R  DA  +F E  +KG+     TY  +++GL + ++
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 599



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 247/528 (46%), Gaps = 52/528 (9%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            G  C P+ V+Y+ +++  F +G++++  +L  +M  +G+ P+  TY  ++ G CK    
Sbjct: 191 HGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLF 250

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A  V   M  N   P+ +TYN LI+G+ + G  +E  ++ +EM +  L PD  TY +L
Sbjct: 251 DRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSL 310

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +N   ++GR  EA    D +   GIKP   T+ I+I  Y  +G + +    +  M ENG 
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL 370

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SPD   +N    A  K G +++A  + + M + GL  N                      
Sbjct: 371 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV--------------------- 409

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
                         V+YG LI    +  + + A   +++M    + P+   +N++++GL 
Sbjct: 410 --------------VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 455

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
              K E+A +++ E+L  G+ P+   FNT+I   C+ G+V +  +  + M     +PD  
Sbjct: 456 TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAF 515

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           +   L+SG C  G  ++A K F   +  G +   VTYNTL+   C   R++DA+ L  EM
Sbjct: 516 SYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 575

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             K + P   TY  I   L ++ R  EA++    M+ +G             T  +I   
Sbjct: 576 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG-------------TKCDI--- 619

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             +Y+  +N  C      +A ++F+    KG+ +N  T+  ++  L+K
Sbjct: 620 -YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 666



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 222/454 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY ++L+ L K G+  E R     M ++G+ P  +TY IL+ GY   G 
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGA 354

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E    +DLM +N   PD   +N+  + +   GM+++A  +  +M    L P+VV Y  
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ PN V  N ++   C   K ++A ++V  M + G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V +NTLI   C  G + E  R++D+M   G++ +  +   ++   C   + DEA 
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +     G    EV+Y TL+ GY    + + A  L+ EM  + + P   TYN ++ GL
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +  +A ++   ++ SG   D  T+N I++G C    V++A +    +  K  + +I
Sbjct: 595 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 654

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T  I++  L + G  E A+  F +    G   + VTY  +  +L +E  LE+   L S 
Sbjct: 655 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSA 714

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           ME+    P+     A+   L+  G +  A  + S
Sbjct: 715 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLS 748



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 193/399 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+  +N    A  K G +++  D+ + M++ GL PN   Y  L+   CKLG + +A
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + M      P++  +N L+ G C     E A  L  EM    + P+ V +NTLI  
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR ME  +LID ++  G++P+A ++  +I  YC  G+ D+A K+   M   G SP 
Sbjct: 489 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTL+   C A  +++A+ +   M RKG+    +T NTILH L   K+  EA  L  
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL 608

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +    G   D  +Y  ++ G  +    + A K++  +  + +  +  T+  MI  L + G
Sbjct: 609 NMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 668

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A+D+   +  +G++P+  T+  +      EG +E+     + M +    P+    N
Sbjct: 669 RKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 728

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
            L+  L   G + +A  +      +  +V++ T + L+S
Sbjct: 729 ALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMS 767



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 179/368 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V Y  ++DAL K G++++     + M  +G+ PN   +N LV G C +  
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A  +V  M      P+   +N LI   CN G + E  RL   ME + + PD  +Y  
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +  +GR+ EA K+ D +   G+ P  VT+N ++  YC   +ID A  + R M   G
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTYNT++    +     EA  +   M   G K +  T N IL+ LC    +DEA+
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 639

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S   +G  L+ +++  +I    +  +   A+ L+  +    ++P+  TY  +   L
Sbjct: 640 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 699

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+   + + + ++G  P+    N ++      G + +A  + +K+ E++F  + 
Sbjct: 700 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 759

Query: 361 VTCNILLS 368
            T ++L+S
Sbjct: 760 STTSLLMS 767



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 123/277 (44%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  +Y  ++      G+ +E   +   M   GL P   TYN L+ GYC    
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  +   M +    P V TYN +++G        EA  L   M +     D+ TYN 
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   +S    EAFK+   L   G++ N +T  IMI    K G+ + A  +   +  NG
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  + +   + G++EE   +   M + G   N+  LN ++  L     +  A 
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 744

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
             L+   +R + ++  +   L++ +  DE  + A  L
Sbjct: 745 AYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 23/237 (9%)

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF----CSEGQVEKALQFHNKMVEKS- 355
           S+S   + A+ + +ELL          FN ++       CS    E A+   N+MV +  
Sbjct: 25  SRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSAS-ELAVSHFNRMVRECS 83

Query: 356 --FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               P++ T +IL+   CR G LE     F   +  G  +D +  N L+  LC  +R+ +
Sbjct: 84  DKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGE 143

Query: 414 AFG-LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           A   LL  M E    PD  +Y  +   L    R EEA +   +M +    +H    P   
Sbjct: 144 AMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMAD----DHGRRCP--- 196

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  P+ +SYS  IN   ++G+      +F E   +GI  +  TY  +++GL K
Sbjct: 197 -------PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCK 246


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 168/552 (30%), Positives = 261/552 (47%), Gaps = 55/552 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   ++NT+L A+ K  +  +V  L   M   GL P+  T NIL++ YC L  +   + V
Sbjct: 90  PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +    P+  T+  L+ G C    + EA  L ++M  +   P+VVTY TL+N    
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCM 209

Query: 128 SGRSMEAFKLIDE-LDEHG-----IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +G +M A KL +E L+ +G     IKPN V +  +I   CK+G IDK  ++   M+  G 
Sbjct: 210 TGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGI 269

Query: 182 SPDCV-----------------------------------TYNTLIDANCKAGNMEEAFR 206
           SPD V                                   T+N LIDA CKAG MEEA  
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           ++ +M ++G   +T T NT++   C E ++D+A  L  S   +G   D VSY  LI GY 
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  +   A KL+ EM  ++IMP+  TYN ++ GL + GK   A ++  E+    + P+  
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+N ++ G C    + +A++  + +    F+P I   N L+ GLC+   +E A + F   
Sbjct: 450 TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             +G   + +TY  +I  LCK  +LE+A  L   MEEK   P+  T+  +     ++   
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN--- 566

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +E QK   ++ E  + +     P+ S     +D   +S  EK  E      Y   L  F 
Sbjct: 567 DEMQKVVELLQEMAEKD---FSPDASTISIVVD--LLSKDEKYRE------YLHLLPTFP 615

Query: 507 ETRQKGIAINKS 518
              Q G    KS
Sbjct: 616 AQGQTGRGYEKS 627



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 254/538 (47%), Gaps = 44/538 (8%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK--EAMRVVDLMTQNKSLPDVW 81
           G ++  +D +S+   +G + N    N      CK G +K  EA  V + +   +  P + 
Sbjct: 40  GPISLTKDTVSNAPDRGQLENFLKSN------CKSGHIKRSEAFSVFNHLIDMQPTPPIS 93

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           ++N L+          +   L K M  + L PD +T N LIN +    +      ++ E+
Sbjct: 94  SFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEM 153

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
              G  PN VT   ++K  C   +I +A  ++R M   G+ P+ VTY TL++  C  GN 
Sbjct: 154 LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNT 213

Query: 202 EEAFRMMDVM--GRKG----LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
             A ++ + M  G  G    +K N +   TI+ +LC +  +D+   L      RG   D 
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y ++I G     +   A  L++EM +  + P+  T+N +I  L ++GK E+A  +L  
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           ++Q G  PD  T+NT+I GFC EG+++ A      M  K  + D V+ N+L++G C+ G 
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           + +A K +R  + K      +TYNTL++ L +E ++ DA+ L  EM+   L P+  TY  
Sbjct: 394 MVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNI 453

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS----------------------- 472
           +   L ++  L EA +    +      NH   QP+                         
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLE-----NHD-FQPSIQIFNCLIDGLCKARKIEIARELFN 507

Query: 473 -KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + E ++P+ I+Y+  I+  C  G+ ++A  +F    +KG A N  T+  LM G  +
Sbjct: 508 RLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQ 565



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 173/361 (47%), Gaps = 25/361 (6%)

Query: 182 SPDCVTYNTLIDANCKAGNME--EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           +PD       + +NCK+G+++  EAF + + +          + NT+L  +   K+  + 
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L    S  G   D ++   LI  Y    K +  L +  EM  R   P+T T+ +++ G
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK----- 354
           L    +  +A  +L ++++ G  P+  T+ T+++G C  G    A++ H +M+       
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231

Query: 355 -SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
            + KP++V    ++  LC++G+++K  + F     +G + D V Y+++I  +C   R E 
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A GL +EM ++ + P+  T+  +  AL ++G++EEA     +M++ G+            
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE------------ 339

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                 P + +Y+  I+  C +GR  DA  +F     KGI  +  +Y  L+NG  K  + 
Sbjct: 340 -----SPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394

Query: 534 I 534
           +
Sbjct: 395 V 395


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 273/547 (49%), Gaps = 20/547 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  T+   + +  +  + +  R LL++M  QG   +   Y  ++ G+ +     EA
Sbjct: 141 GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEA 200

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M      PD+  +N LI+  C  G ++E+ RL  ++    + P++ T N  I  
Sbjct: 201 HELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQG 260

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +     EA +L+D +   G+ P+ +T+N +I   CK  K+ +A   +R M   G+ PD
Sbjct: 261 FCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPD 319

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN++ID  CK G M+ A +++     KG   +  T  ++++ LC +  +D A  + N
Sbjct: 320 GFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFN 379

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A ++G   + V   TL+ G  +     +ALKL +EM E    P  +TYN +I GL + G
Sbjct: 380 EAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIG 439

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A +++ + +  G +PD  TFNT+I G+C + +++ A++  ++M      PD++T N
Sbjct: 440 CVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYN 499

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +L+GLC+ G  E  +  F+  + KG   + +TYN L  S CK R++E+A  L+ EM+ K
Sbjct: 500 SILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNK 559

Query: 425 KLGPDRYTYAAIHTALVESG----------RLEEAQKFT------SIMVE--TGKINHQV 466
            L PD   +  +     ++G          R++E  KF+      +IM+    GK+N  +
Sbjct: 560 GLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNM 619

Query: 467 VQPNTSKTPEE-IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            +   +K  E    P S +Y   I+  C  G             +KG+  + +T+  ++N
Sbjct: 620 AEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLN 679

Query: 526 GLIKRRK 532
            L  +R+
Sbjct: 680 CLCLKRR 686



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 249/506 (49%), Gaps = 18/506 (3%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           +KGK+ E  D+   M      P+  +YN +++   +  +  +A +V   M     +PDV+
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+ + +  +C       A RL   M S       V Y T+I  F+E    +EA +L +E+
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
              GI P+ +  N +I   C++G + ++ +++  + + G SP+  T N  I   C+   +
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            EA R++D +GR GL  + IT NT++  LC   K+ EA   L      GY  D  +Y ++
Sbjct: 268 NEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY +      A ++  +   +  +P   TY ++I GL Q G  ++AI++ NE ++ G+
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+    NT++ G   +G + +AL+  N+M E    PDI T N++++GLC+ G +  A  
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                I KG   D  T+NTLI   CK+ +L++A  ++  M    + PD  TY +I   L 
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           ++G+ E+      +M+E G +                 P+ I+Y+      C   + ++A
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCV-----------------PNIITYNILTESFCKARKVEEA 549

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGL 527
           L + EE + KG+  +   +  LM G 
Sbjct: 550 LNLIEEMQNKGLTPDVVNFGTLMKGF 575



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 250/527 (47%), Gaps = 41/527 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD + +N ++  L +KG + E   LL+ + K+G+ PN  T NI + G+C+   
Sbjct: 207 MLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAM 266

Query: 61  LKEAMRVVD---------LMTQNKSL-------------------------PDVWTYNML 86
           L EA+R++D         ++T N  +                         PD +TYN +
Sbjct: 267 LNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           I+G+C  GM++ A ++ ++      +PD  TY +LIN   + G    A  + +E  E G+
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           KPN V  N ++K   ++G I +A K++  M ENG SPD  TYN +I+  CK G + +A  
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           ++     KG   +  T NT++   C + KLD A  +++     G   D ++Y +++ G  
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  K    +  +  M E+  +P+  TYN +     ++ K E+A++++ E+   G+ PD  
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            F T++ GFC  G ++ A Q   ++ E+  F   I T NI+++    +  +  A K F  
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
               G + DS TY  +I   CK   +   +  L    EK L P   T+  +   L    R
Sbjct: 627 MCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRR 686

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           + EA     +MV      H+ + P    T  E D   ++  + + E+
Sbjct: 687 VHEAVGIIHLMV------HKGIVPEVVNTIFEADKKEVAAPKIVVEN 727



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 255/525 (48%), Gaps = 23/525 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMK---KQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           +TY  +++ L   G+   + ++L++ +     GL+     Y   +  Y + G ++EA+ V
Sbjct: 41  LTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLL--EGVYIGAMRNYGRKGKIQEAVDV 98

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      P V +YN ++N        ++A ++   M    ++PDV T+   +  F  
Sbjct: 99  FERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCR 158

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R   A +L++ +   G + +AV +  +I  + +E    +A ++   M   G  PD + 
Sbjct: 159 TSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMA 218

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N LI   C+ G+++E+ R+++ + ++G+  N  T+N  +   C    L+EA  LL+   
Sbjct: 219 FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG 278

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   D ++Y TLI G  ++ K   A     +M      P  FTYN++I G  + G  +
Sbjct: 279 -RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQ 337

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L +    G +PDE+T+ ++I+G C +G +++A+   N+ +EK  KP++V CN L+
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL ++G++ +ALK        G + D  TYN +I+ LCK   + DA  L+ +   K   
Sbjct: 398 KGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD +T+  +     +  +L+ A +    M   G                 + P  I+Y+ 
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG-----------------VSPDVITYNS 500

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +N  C  G+Y+D +  F+   +KG   N  TY  L     K RK
Sbjct: 501 ILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 266/567 (46%), Gaps = 45/567 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +L +  K+G+++ V  L  DM   G+ P   T+N+L+   C  G L +A  +
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M +    P+ +++ +L+ G+C AG   +   L  EM  L   P+ V YNTLI+ F +
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF----SP 183
            G++ +A KL+DE+ + G+ P+ VT N  I   C  GK+ +A +I R+M+ +       P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TYN ++   CK G +EEA  + + M      MN  + N  L  L    KL EA ++L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   +  SY  ++ G  ++     A  L   M    ++P T TY  ++ G   +
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A ++L E+++ G  P+  T N +++    EG++ +A +   KM EK +  D VTC
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
           NI++ GLC  G L+KA++        G A                        D ++Y+T
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----------- 449
           +IS LCK  R+ +A     EM  K L PD   Y     +  + G++  A           
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 498

Query: 450 -----QKFTSIMVETGKINH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
                Q + S+++  G  N   ++           + P    Y+  ++  C  GR KDA 
Sbjct: 499 CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 558

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
            + +E  QKGI+ N S++  L+    K
Sbjct: 559 SVLDEMLQKGISPNISSFSILIKAFCK 585



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 246/490 (50%), Gaps = 41/490 (8%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  L  L + GKL E + +L +M   G+ PN  +YNI++ G CK G L +A  ++ LM
Sbjct: 237 SYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLM 296

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
           T +  LPD  TY  L++G+C+ G + EA  + +EM      P+  T N L+   ++ GR 
Sbjct: 297 TSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRI 356

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--------- 182
            EA +L+ +++E G   + VT NI+I   C  GK+DKA +IV  M  +G +         
Sbjct: 357 SEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSY 416

Query: 183 --------------PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
                         PD ++Y+T+I   CKAG + EA +    M  K L+ ++   +  +H
Sbjct: 417 IGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIH 476

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           + C E K+  A+ +L    K+G      +Y +LI G     +      L DEM+ER + P
Sbjct: 477 SFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSP 536

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
               YN ++  L + G+ + A  +L+E+LQ G+ P+ ++F+ +I  FC      KA  F 
Sbjct: 537 DVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFC------KACDF- 589

Query: 349 NKMVEKSFKPDIVTC-------NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
              V++ F+  +  C       ++  + L   G + KA + F + + +   V +  Y  L
Sbjct: 590 -SAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDL 648

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET-- 459
           I  LCK+ +L+DA G+L ++ +K    D  ++  +   L + G   EA +    M+E   
Sbjct: 649 IDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMAS 708

Query: 460 -GKINHQVVQ 468
            GK+ ++V Q
Sbjct: 709 EGKVKNKVHQ 718



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 183/383 (47%), Gaps = 31/383 (8%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P    YN L+ +  K G ++    +   M   G+   T T N ++  LC    LD+A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +   ++G   +E S+G L+ GY R    ++ L+L  EM+     P+   YN +I    +
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV-EKALQFHNKMVEKSF---KP 358
            GKT+ A  +++E+ + G+ PD  TFN  I   CS G+V E +  F +  +++     +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +I+T N++L G C+EG+LE+A   F    +    ++  +YN  +  L +  +L +A  +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP-------NT 471
            EM +  + P+ Y+Y  +   L ++G L +A+    +M  +G +   V          +T
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 472 SKTPEEIDPSSISYSEKINEHCS---------------QGRYKDALQIFEETRQKGIAIN 516
            K  E    ++    E + + CS               +GR  +A ++ ++  +KG  I+
Sbjct: 319 GKVSE----ANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVID 374

Query: 517 KSTYMNLMNGLIKRRKSISKAVD 539
             T   +++GL    K + KA++
Sbjct: 375 TVTCNIVIDGLCNNGK-LDKAIE 396



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 142/281 (50%), Gaps = 7/281 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+PD ++Y+TI+  L K G++ E +    +M  + L P+   Y++ +  +CK G +  A 
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           RV+  M +      + TYN LI G  +   + E + L  EM    + PDV  YN +++  
Sbjct: 489 RVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSL 548

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE---GKIDKACKIVRNMEENGFS 182
            E GR  +A  ++DE+ + GI PN  + +I+IK +CK      +D+  +I  N+  +  +
Sbjct: 549 CEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEA 608

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
              +T+N L+      G + +A  + +    +   +       ++  LC ++KLD+A  +
Sbjct: 609 LYSLTFNELL----VGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGI 664

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           L+    +GY+ D  S+  +I G  +    + A +L ++M E
Sbjct: 665 LHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 7/214 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC     TYN+++  L  K ++ E+  L+ +M+++G+ P+ + YN ++S  C+ G 
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA---GMLEEAFRLRKEMESLKLLPDVVT 117
           +K+A  V+D M Q    P++ ++++LI  +C A     ++E F +   +   K       
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHK----EAL 609

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y+   N     G  ++A +L +   +         +  +I   CK+ K+D A  I+  + 
Sbjct: 610 YSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLI 669

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           + G+  D  ++  +ID   K GN  EA  + + M
Sbjct: 670 DKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 274/531 (51%), Gaps = 27/531 (5%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-DL 70
           TY+ ++D   +  + +    L   + + GL  ++ T + L+   C     +EA+ V+   
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINRFFES 128
           M++   +P+V++Y++++ G C+  M + A  L + M  E     P+VV YNT+I+ FF+ 
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G + +A  L  E+   G+KP+ VT+N++I   CK   +DKA  ++R M  NG  PD VTY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N +I      G ++EA +M   M  +GL  N +  N+ L +LC   +  EA  + +S + 
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G+  D VSY TL+ GY  +      + L++ MK   I      +N +I   ++ G  + 
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+ +  E+ Q G+ PD  T++T+I  F   G++  A++  N+MV +  +P+    + ++ 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518

Query: 369 GLCREGILEKALKFFRSWILKG-KAVDSVTYNTLISSLCKERRLEDA---FGLLSEMEEK 424
           G C  G L KA +     I KG    D V +N++I+SLCK+ R+ DA   F L++++ E+
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER 578

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              PD  T+ ++       G++++A K    M   G                 ++   ++
Sbjct: 579 ---PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG-----------------VETDIVT 618

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           YS  ++ +   GR  D L +F E ++KG+  N  TY  ++ GL +  ++++
Sbjct: 619 YSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 232/463 (50%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+  +Y+ IL  L          DL   M K+G    PN   YN ++ G+ K 
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G   +A  +   MT+    PDV TYN++I+  C A  +++A  + ++M +    PD VTY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N +I+ +   GR  EA K+  ++   G+ PN V  N  +   CK G+  +A +I  +M  
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD V+Y TL+      G   +   + + M   G+  +    N ++H       +D+
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++     ++G   D V+Y T+I+ + R  +   A++ +++M  R I P+T  Y+++I 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518

Query: 299 GLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           G    G   +A ++++E++  G+  PD   FN++I+  C +G+V  A    + + +   +
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER 578

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD++T   L+ G C  G ++KA K   +  + G   D VTY+TL+    K  R+ D   L
Sbjct: 579 PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTL 638

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM+ K + P+  TY  +   L  +GR   A+K    M+E+G
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 239/455 (52%), Gaps = 1/455 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P+ V  N+ L +L K G+  E  ++   M  +G  P+  +Y  L+ GY   GW
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW 420

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             + + + + M  N    D   +N+LI+ +   GM+++A  +  EM+   + PDVVTY+T
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F   GR  +A +  +++   GI+PN   ++ +I+ +C  G + KA ++V  M   G
Sbjct: 481 VISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 181 FS-PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              PD V +N++I++ CK G + +A  + D++   G + + IT  +++   C   K+D+A
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + +L++    G   D V+Y TL+ GYF++ + N  L L+ EM+ + + P+T TY  M+ G
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+T  A    +E+++SG     + +  I+ G C     ++A+    K+   + K  
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFS 720

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   N +++ + +    E+A + F +    G   +  TY  +I +L K+  +EDA  + S
Sbjct: 721 ITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFS 780

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            ME+  + P       I   L+E G + +A  + S
Sbjct: 781 SMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLS 815



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 248/532 (46%), Gaps = 71/532 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG  C P+ V YNT++   FK+G+  +   L  +M +QG+ P+  TYN+++   CK   +
Sbjct: 257 EGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAM 316

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  V+  MT N + PD  TYN +I+G+   G L+EA ++ ++M+S  L+P++V  N+ 
Sbjct: 317 DKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSF 376

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           +    + GRS EA ++ D +   G KP+ V++                            
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  NI+I  Y K G +D A  I   M++ G SPD VTY+T+I A  + G + +A  
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY-YLDEVSYGTLITGY 265
             + M  +G++ NT   ++I+   C    L +A  L++    +G    D V + ++I   
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSL 556

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +D +   A  ++D + +    P   T+ ++I G    GK ++A  +L+ +   G+  D 
Sbjct: 557 CKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI 616

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T++T++ G+   G++   L    +M  K  KP+ VT  I+L+GL R G    A K F  
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 386 WILKGKAVDSVTY-----------------------------------NTLISSLCKERR 410
            I  G  V    Y                                   NT+I+++ K +R
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            E+A  L + +    L P+  TY  +   L++ G +E+A    S M ++G +
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIV 788



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 215/434 (49%), Gaps = 10/434 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D   +N ++ A  K+G +++   + ++M++QG+ P+  TY+ ++S + ++G 
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-LPDVVTYN 119
           L +AM   + M      P+   Y+ +I G+C  G L +A  L  EM +  +  PD+V +N
Sbjct: 491 LTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFN 550

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++IN   + GR M+A  + D + + G +P+ +T   +I  YC  GK+DKA KI+  ME  
Sbjct: 551 SVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVV 610

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G   D VTY+TL+D   K G + +   +   M RKG+K NT+T   +L  L    +   A
Sbjct: 611 GVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAA 670

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               +   + G  +    YG ++ G  R+  A+ A+ L+ ++    +  S    N MI  
Sbjct: 671 RKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           + +  + E+A ++   +  SG++P+E+T+  +I     +G VE A    + M +    P 
Sbjct: 731 MYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPG 790

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
               N ++  L  +G + KA  +      K   +++ T + ++S   ++ +         
Sbjct: 791 SRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYH------- 843

Query: 420 EMEEKKLGPDRYTY 433
             E+ KL P +Y +
Sbjct: 844 --EDMKLLPAKYNF 855


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 156/528 (29%), Positives = 258/528 (48%), Gaps = 21/528 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +T+NT+++ L KKGK+ E   + + + +  L P+  TY  L+ G+C+   L +A
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKA 251

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M ++   P+  TY+ LING CN G + EA  + +EM    + P V TY   I+ 
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A  L+  + + G  P+  T+  +I    + GK++ A  +   M + G  P+
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN 371

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  C  G    A ++ D M   G   N  T N I+  L     +++A ++ N
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFN 431

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G     V+Y TLI    +    N A +    MKE    P   TY  +I G  + G
Sbjct: 432 KMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGG 491

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A     E+L+ G+ P++ T+  +I G+C EG+++ AL    +M E      I T N
Sbjct: 492 KLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYN 551

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++SGL +     +A KF      +G   +++TY +LI+ LCK      AF +  EME+K
Sbjct: 552 AIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK 611

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+ +TY ++   L + G+++ A++ T    E G                  +P+  +
Sbjct: 612 NCLPNAHTYTSLIYGLCQEGKVDAAERLT----ENG-----------------CEPTIDT 650

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           YS  ++  C +GR  +A Q+ E  ++KG++ +   Y +L+    K  K
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLK 698



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 264/529 (49%), Gaps = 21/529 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P++VTY+T+++ L  +G++ E  D+L +M ++G+ P   TY + +S  C +G + +A
Sbjct: 262 GCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDA 321

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V  M +    P V TY  +I+G   AG +E A  +  +M    L+P+ VTYN LIN 
Sbjct: 322 INLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINE 381

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR   A K+ D ++ HG   NA T+N +IK       I+KA  +   M ++G SP 
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPT 441

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI  N K G +  A R + +M     + +  T   ++   C   KLD A     
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   ++ +Y  +I GY ++ K + AL L++ M+E     S  TYNA+I GLS+  
Sbjct: 502 EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN 561

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A     ++ + G+ P+  T+ ++I+G C       A +  ++M +K+  P+  T  
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYT 621

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GLC+EG ++ A +   +    G      TY+TL+S LC+E R  +A  L+  M+EK
Sbjct: 622 SLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEK 677

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P    Y ++  A  +S +++ A +  ++M   G                   P    
Sbjct: 678 GLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKG-----------------FQPHLFI 720

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           Y   I   C   R ++AL IF+   +K    +   +  L++GL++   S
Sbjct: 721 YKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 223/453 (49%), Gaps = 6/453 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P   TY  I+  LF+ GK+     +   M K+GLVPN  TYN L++  C  G    A
Sbjct: 332 GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIA 391

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++ D M  + +L +  TYN +I G      +E+A  +  +M      P VVTYNTLI  
Sbjct: 392 LKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A + +  + E   +P+  T+  +I  +CK GK+D A      M + G SP+
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  +ID  CK G ++ A  + + M   G   +  T N I+  L    +  EA     
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA 571

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             +++G   + ++Y +LI G  ++   N A K++ EM+++  +P+  TY ++I+GL Q G
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI-VTC 363
           K    +D    L ++G  P   T++T++ G C EG+  +A Q    M EK   P + + C
Sbjct: 632 K----VDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYC 687

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           ++L++  C+   ++ AL+ F    +KG       Y  LI +LC   R E+A  +   + +
Sbjct: 688 SLLVAH-CKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLK 746

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           K+   D   +  +   L++ G  +   KF  +M
Sbjct: 747 KQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLM 779



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 233/488 (47%), Gaps = 52/488 (10%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           ++++N L+       M+  A  +  ++ S  + P ++T+NT+IN   + G+  EA  + +
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           ++ +  + P+A T+  +I  +C+  K+DKA ++   M ++G +P+ VTY+TLI+  C  G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            + EA  M++ M  KG++    T    + +LC   ++D+A  L+ S  K+G      +Y 
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            +I+G FR  K   A+ ++ +M +  ++P+T TYNA+I  L   G+   A+ + + +   
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGH 401

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI-------------- 365
           G + +  T+N II G      +EKA+   NKM++    P +VT N               
Sbjct: 402 GTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNA 461

Query: 366 ---------------------LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
                                L+SG C+ G L+ A  FF   +  G + +  TY  +I  
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            CKE +++ A  L   MEE        TY AI + L +  R  EA+KF + M E G    
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG---- 577

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
             +QPNT           I+Y+  IN  C       A +IF E  +K    N  TY +L+
Sbjct: 578 --LQPNT-----------ITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLI 624

Query: 525 NGLIKRRK 532
            GL +  K
Sbjct: 625 YGLCQEGK 632



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 190/383 (49%), Gaps = 4/383 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G L +  TYN I+  LF    + +   + + M K G  P   TYN L+    K G+
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A R + +M ++   PD  TY  LI+G+C  G L+ A     EM    + P+  TY  
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + + G+   A  L + ++E+G   +  T+N +I    K  +  +A K    M E G
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TY +LI+  CK      AF++   M +K    N  T  ++++ LC E K+D A 
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE 637

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    ++ G      +Y TL++G  R+ ++N A +L + MKE+ + PS   Y +++   
Sbjct: 638 RL----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAH 693

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S K + A+++ N +   G  P    +  +I   C   + E+AL     +++K +  D+
Sbjct: 694 CKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDL 753

Query: 361 VTCNILLSGLCREGILEKALKFF 383
           +   +L+ GL +EG  +  +KF 
Sbjct: 754 IVWTVLVDGLLQEGDSDLCMKFL 776



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 4/351 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD  TY  ++    K GKL+       +M K G+ PN+ TY  ++ GYCK G +  A+
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M +N     + TYN +I+G        EA +   +M    L P+ +TY +LIN  
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++  +  AFK+  E+++    PNA T+  +I   C+EGK+D A      + ENG  P  
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTI 648

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY+TL+   C+ G   EA ++++ M  KGL  +     ++L   C   K+D A  + N 
Sbjct: 649 DTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNL 708

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            + +G+      Y  LI       +A  AL ++  + ++Q       +  ++ GL Q G 
Sbjct: 709 MAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           ++  +  L  +      P   T+  +       G+     Q  N++ E S 
Sbjct: 769 SDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVSL 819


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 249/523 (47%), Gaps = 17/523 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V+ NTI+    K G ++  R     M K GL+ +  +YNIL+ G C  G + EA+  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M ++   PDV TYN L  G+   G++  A ++ ++M    L PD+VTY TLI    +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL  E    G K N + +N+++   CK G+I++A  +   ME     PD + 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI   CK G ++ A+++ + M  K    +      +L  L     + EA    ++ +
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     D V Y  +I GY R +    A++L+ +M ER I PS  T+N +I G  + G   
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  ML  +   G++P   T+ T+++ +C  G +++   F ++M   +  P  VT  +L+
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCR+  + ++L+       KG   DSVTYNT+I   CK + +  A  L + M      
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P + TY  +  AL   G L++  +                    S     I    ++Y  
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMV-----------------VSIEDRNITLKKVTYMT 731

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I  HC++G+   AL  F +   KG  I+   Y  ++N L KR
Sbjct: 732 IIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKR 774



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 222/460 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VTYNT+       G ++  R ++  M  QGL P+  TY  L+ G+C++G 
Sbjct: 332 MEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGN 391

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+++           +V  YNML++  C  G +EEA  L  EME+L+L PD + Y+ 
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A++L +++      P+      ++    K G I +A           
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V YN +ID   +   + EA ++   M  +G+  + +T NT+++  C    L EA 
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L     +G     V+Y TL+  Y              EM+   ++P+  TY  +I GL
Sbjct: 572 KMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGL 631

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K  +++ +L  +   G++PD  T+NTII  FC   ++ KALQ +N M+  +  P  
Sbjct: 632 CRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQ 691

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L++ LC  G L+   +   S   +   +  VTY T+I + C + ++  A G  ++
Sbjct: 692 VTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQ 751

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  K        Y+A+   L + G + EA+ F  +M+  G
Sbjct: 752 MLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEG 791



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 198/444 (44%), Gaps = 70/444 (15%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + YN +L  L K G++ E   L  +M+   L P+   Y+IL+ G CK G+++ A ++ + 
Sbjct: 412 IFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQ 471

Query: 71  MTQNKSLP-------------------------DVWT----------YNMLINGWCNAGM 95
           M   +  P                         D WT          YN++I+G+     
Sbjct: 472 MRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDG 531

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + EA +L  +M    + P VVT+NTLIN F   G  MEA K+++ +   G+ P+ VT+  
Sbjct: 532 IAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTT 591

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++  YC+ G + +    +  ME N   P  VTY  LI   C+   M E+ ++++ M  KG
Sbjct: 592 LMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKG 651

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L  +++T NTI+   C                                   + ++  +AL
Sbjct: 652 LLPDSVTYNTIIQCFC-----------------------------------KGKEITKAL 676

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L++ M      P+  TY  +I  L   G  +    M+  +    +   + T+ TII   
Sbjct: 677 QLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAH 736

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C++GQV KAL + N+M+ K F   I   + +++ LC+ G++ +A  FF   + +G   D 
Sbjct: 737 CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDP 796

Query: 396 VTYNTLISSLCKERRLEDAFGLLS 419
               T++++  ++      F  L+
Sbjct: 797 EICKTVLNAFHQQGNNSSVFEFLA 820



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 236/533 (44%), Gaps = 46/533 (8%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM- 71
           +  I DALF   K+        D+  Q  VP   TYN L+            MR  D+M 
Sbjct: 183 HEMIHDALFVIAKMK-------DLNFQASVP---TYNSLLHN----------MRHTDIMW 222

Query: 72  -----TQNKSLPDV-WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                 +    P    T ++LI+G C    LE+A     +   + + P +V+ NT++++F
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKF 281

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G    A      + ++G+  ++ ++NI++   C  G +D+A     +ME++G  PD 
Sbjct: 282 CKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYNTL       G M  A +++  M  +GL  + +T  T++   C    ++EA  L   
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              RG+ L+ + Y  L++   +  +   AL L+DEM+  ++ P    Y+ +I GL + G 
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A  +  ++      P       ++ G    G + +A  + +         D+V  NI
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ G  R   + +A++ +   I +G     VT+NTLI+  C+   L +A  +L  +  K 
Sbjct: 522 MIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P   TY  +  A  E G ++E   F   M                     + P+ ++Y
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM-----------------EANAVVPTHVTY 624

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +  I   C Q +  ++LQ+ E    KG+  +  TY  ++    K  K I+KA+
Sbjct: 625 TVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK-GKEITKAL 676



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 231/524 (44%), Gaps = 24/524 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D+V  N I+D     G  + + DLL + K +    N   +++L   Y +   + +A+ V+
Sbjct: 137 DSVIKNLIVDQ--GLGSASIICDLLLE-KFRNWDSNGLVWDMLAFAYSRHEMIHDALFVI 193

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M        V TYN L++   +  ++ + +    E++         T + LI+   E 
Sbjct: 194 AKMKDLNFQASVPTYNSLLHNMRHTDIMWDVY---NEIKVSGAPQSECTTSILIHGLCEQ 250

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +  +A   + + ++  + P+ V+ N ++  +CK G ID A      M +NG   D  +Y
Sbjct: 251 SKLEDAISFLHDSNK-VVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSY 309

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+   C AG+M+EA    D M + G++ + +T NT+         +  A  ++     
Sbjct: 310 NILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLL 369

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D V+Y TLI G+ +      ALKL  E   R    +   YN ++  L + G+ E+
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+ + +E+    + PD   ++ +IHG C EG V++A Q + +M  K   P       +L 
Sbjct: 430 ALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL + G + +A  +F +W       D V YN +I    +   + +A  L  +M E+ + P
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
              T+  +       G L EA+K   ++   G +                 PS ++Y+  
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLV-----------------PSVVTYTTL 592

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +N +C  G  ++      E     +     TY  L+ GL ++ K
Sbjct: 593 MNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 264/548 (48%), Gaps = 27/548 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   Y  ++ +L +       R+++  M+  G   +  TYN+ + G CK   + EA
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +L++      DV TY  L+ G C     E    +  EM     +P     + L++ 
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    AF L++++ + G+ P+   +N +I   CK+GK+D+A  +  NM   G  P+
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY+ LID+ CK G ++ A   +  M   G+K      ++++   C   KL  A  L +
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + V Y +LI+GY ++ + + A +L+ EM  + I P+T+T+ A+I GL  + 
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A  +  E+++  +IP+E T+N +I G C EG   +A +  ++MVEK   PD  T  
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 365 ILLSGLCREGILEKALKFFRSWI--------LKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            L+SGLC  G + +A +F             ++G   + VTY  LI+ LCK   ++ A  
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAEL 629

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE------------------ 458
           L  EM      P++ TYA     L   G +E+A +   +++E                  
Sbjct: 630 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCK 689

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G+I  +  +   +     I P  ISYS  I E+C +G  K+A++++E    +G+  +  
Sbjct: 690 LGRI-QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748

Query: 519 TYMNLMNG 526
            Y  L+ G
Sbjct: 749 AYNFLIYG 756



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 262/530 (49%), Gaps = 26/530 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D  TY T++  L K  +     +++++M + G VP+    + LV G  K G +  A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +V+ + +    P ++ YN LIN  C  G L+EA  L   M    L P+ VTY+ LI+ 
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+   A   + ++ E GIK     ++ +I  +CK GK+  A  +   M  NG  P+
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y +LI   CK G +  AFR+   M  KG+  NT T   ++  LC   ++ EA  L  
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +     +EV+Y  LI G+ ++    RA +L DEM E+ ++P T+TY  +I GL  +G
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 305 KTEQAIDMLNELLQS--------GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +  +A + +N+L           G +P+  T+  +I+G C  G ++KA     +M+  + 
Sbjct: 580 RVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 639

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P+  T    L  L  EG +EKA++     +L+G   ++VTYN LI   CK  R+++A  
Sbjct: 640 LPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAE 698

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           +L  M +  + PD  +Y+ I       G L+EA K    M+  G                
Sbjct: 699 VLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG---------------- 742

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            ++P +++Y+  I   C  G    A ++ ++  ++G+  N++TY +L++G
Sbjct: 743 -VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 234/459 (50%), Gaps = 10/459 (2%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG  P    YN +++++ K GKL+E   L ++M  +GL PN  TY+IL+  +CK G L  
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +  MT+      V+ Y+ LI+G C  G L  A  L  EM +  L P+VV Y +LI+
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + G    AF+L  E+   GI PN  T   +I   C   ++ +A K+   M E    P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN LI+ +CK GN   AF ++D M  KGL  +T T   ++  LC   ++ EA   +
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 244 NSASKRGYYLDE--------VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           N        L+E        V+Y  LI G  +    ++A  L  EM     +P+  TY  
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
            +  L+  G  E+AI  L+++L  G + +  T+N +I GFC  G++++A +    M++  
Sbjct: 649 FLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PD ++ + ++   CR G L++A+K + S + +G   D+V YN LI   C    L  AF
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767

Query: 416 GLLSEMEEKKLGPDRYTY-AAIHTALVESGRLEEAQKFT 453
            L  +M  + + P+R TY + IH   + S     A  F+
Sbjct: 768 ELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 240/477 (50%), Gaps = 15/477 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG +P     + ++D L KKG +    DL++ +KK G+ P+   YN L++  CK G L E
Sbjct: 314 FGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDE 373

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  + + M      P+  TY++LI+ +C  G L+ A     +M  + +   V  Y++LI+
Sbjct: 374 AESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLIS 433

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G+   A  L DE+  +G+KPN V +  +I  YCKEG++  A ++   M   G SP
Sbjct: 434 GHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISP 493

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  T+  LI   C A  M EA ++   M    +  N +T N ++   C E     A+ LL
Sbjct: 494 NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELL 553

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ--------IMPSTFTYNA 295
           +   ++G   D  +Y  LI+G     + + A +  ++++  Q         +P+  TY A
Sbjct: 554 DEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTA 613

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL + G  ++A  +  E+L S  +P++ T+   +    SEG +EKA+Q H+ ++E  
Sbjct: 614 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-G 672

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           F  + VT NIL+ G C+ G +++A +   + I  G + D ++Y+T+I   C+   L++A 
Sbjct: 673 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 732

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            L   M  + + PD   Y  +      +G L +A +    M+  G      V+PN +
Sbjct: 733 KLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG------VKPNRA 783



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 245/504 (48%), Gaps = 12/504 (2%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M   G++P   T + +++G  ++   + A+ + D +  +   PDV+ Y  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
              A  +   MES      V TYN  I    ++ R  EA ++ + L   G++ +  T+  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++   CK  + +   +++  M E GF P     + L+D   K GN+  AF +++ + + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  +    N +++++C + KLDEA  L N+   +G + ++V+Y  LI  + +  K + AL
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
               +M E  I  + + Y+++I G  + GK   A  + +E++ +G+ P+   + ++I G+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C EG++  A + +++M  K   P+  T   L+SGLC    + +A K F   +      + 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS- 454
           VTYN LI   CKE     AF LL EM EK L PD YTY  + + L  +GR+ EA++F + 
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           +  E  K+N            E   P+ ++Y+  IN  C  G    A  +  E       
Sbjct: 591 LQGEQQKLNE----------IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 640

Query: 515 INKSTYMNLMNGLIKRRKSISKAV 538
            N++TY   ++ L     +I KA+
Sbjct: 641 PNQNTYACFLDYLTS-EGNIEKAI 663



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 216/490 (44%), Gaps = 25/490 (5%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           +++L+  Y +     + + VV LM     LP + T + ++NG         A  L  E+ 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           S  L PDV  Y  ++    E    + A ++I  ++  G   +  T+N+ I+  CK  ++ 
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A +I   +   G   D  TY TL+   CK    E    MM+ M   G   +   ++ ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L  +  +  A+ L+N   K G       Y  LI    +D K + A  L++ M  + + 
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+  TY+ +I    + GK + A+  L ++ + G+      ++++I G C  G++  A   
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            ++M+    KP++V    L+SG C+EG L  A + +     KG + ++ T+  LIS LC 
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             R+ +A  L  EM E  + P+  TY  +     + G    A +    MVE G +     
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV----- 562

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET---RQK-----GIAINKST 519
                       P + +Y   I+  CS GR  +A +   +    +QK     G   N  T
Sbjct: 563 ------------PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVT 610

Query: 520 YMNLMNGLIK 529
           Y  L+NGL K
Sbjct: 611 YTALINGLCK 620



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 17/277 (6%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           + +  LI  Y ++ +    L +   M +  I+P   T + ++ GL +  +   A+ + +E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           ++ SG+ PD   +  ++   C      +A +   +M        + T N+ + GLC+   
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           + +A++       KG   D  TY TL+  LCK    E    +++EM E    P     + 
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L + G +  A    + + + G                 + PS   Y+  IN  C  
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFG-----------------VAPSLFVYNALINSMCKD 368

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           G+  +A  +F     KG+  N  TY  L++   KR K
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 240/467 (51%), Gaps = 14/467 (2%)

Query: 4   FGCLPDNVTYNTIL----------DALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVS 53
            G  PD VT+NT+L          +AL   G + E   L   M + GL P   T+N L++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 54  GYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           G C  G + EA  +V+ M       DV TY  ++NG C  G  + A  L  +ME   + P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           DVV Y+ +I+R  + G   +A  L  E+ E GI PN  T+N MI  +C  G+   A +++
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R+M E   +PD +T+N LI A+ K G + EA ++ D M  + +  +T+T N++++  C  
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            + D+A  + +  +      D V++ T+I  Y R ++ +  ++L  E+  R ++ +T TY
Sbjct: 410 NRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I G  +      A D+  E++  G+ PD  T N +++GFC   ++E+AL+    +  
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 525

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                D V  NI++ G+C+   +++A   F S  + G   D  TYN +IS  C +  + D
Sbjct: 526 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 585

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           A  L  +M++    PD  TY  +    +++G ++++ +  S M   G
Sbjct: 586 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 632



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 229/449 (51%), Gaps = 5/449 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  +T+NT+++ L  +G++ E   L++ M  +GL  +  TY  +V+G CK+G 
Sbjct: 212 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 271

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K A+ ++  M +    PDV  Y+ +I+  C  G   +A  L  EM    + P+V TYN 
Sbjct: 272 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 331

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F   GR  +A +L+ ++ E  I P+ +T N +I    KEGK+ +A K+   M    
Sbjct: 332 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 391

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN++I   CK    ++A  M D+M       + +T NTI+   C  K++DE  
Sbjct: 392 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 447

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   S+RG   +  +Y TLI G+   +  N A  L+ EM    + P T T N +++G 
Sbjct: 448 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 507

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ K E+A+++   +  S +  D   +N IIHG C   +V++A      +     +PD+
Sbjct: 508 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 567

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++SG C +  +  A   F      G   D+ TYNTLI    K   ++ +  L+SE
Sbjct: 568 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 627

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M       D +T   +   L+  GRL+++
Sbjct: 628 MRSNGFSGDAFTIKMV-ADLITDGRLDKS 655



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 223/415 (53%), Gaps = 5/415 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D VTY TI++ + K G      +LLS M++  + P+   Y+ ++   CK G 
Sbjct: 247 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 306

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +   M +    P+V+TYN +I+G+C+ G   +A RL ++M   ++ PDV+T+N 
Sbjct: 307 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 366

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+  EA KL DE+    I P+ VT+N MI  +CK  + D A    ++M +  
Sbjct: 367 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLM 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VT+NT+ID  C+A  ++E  +++  + R+GL  NT T NT++H  C    L+ A 
Sbjct: 423 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 482

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D ++   L+ G+  +EK   AL+L++ ++  +I   T  YN +I G+
Sbjct: 483 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 542

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K ++A D+   L   G+ PD  T+N +I GFC +  +  A    +KM +   +PD 
Sbjct: 543 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 602

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T N L+ G  + G ++K+++        G + D+ T   +++ L  + RL+ +F
Sbjct: 603 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 656



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 241/545 (44%), Gaps = 58/545 (10%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  N ++    +  + +    L   M+ + +  N  ++NIL+  +C    L  ++     
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAF----------RLRKEMESLKLLPDVVTYNT 120
           +T+    PDV T+N L++G C    + EA            L  +M  + L P V+T+NT
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN     GR +EA  L++++   G+  + VT+  ++   CK G    A  ++  MEE  
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y+ +ID  CK G+  +A  +   M  KG+  N  T N ++   C   +  +A 
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    +R    D +++  LI+   ++ K   A KL DEM  R I P T TYN+MI+G 
Sbjct: 347 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406

Query: 301 -------------------------------SQSGKTEQAIDMLNELLQSGMIPDETTFN 329
                                           ++ + ++ + +L E+ + G++ + TT+N
Sbjct: 407 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 466

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+IHGFC    +  A     +M+     PD +TCNILL G C    LE+AL+ F    + 
Sbjct: 467 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 526

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
              +D+V YN +I  +CK  ++++A+ L   +    + PD  TY  + +       + +A
Sbjct: 527 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 586

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 M + G                  +P + +Y+  I      G    ++++  E R
Sbjct: 587 NVLFHKMKDNGH-----------------EPDNSTYNTLIRGCLKAGEIDKSIELISEMR 629

Query: 510 QKGIA 514
             G +
Sbjct: 630 SNGFS 634



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 209/465 (44%), Gaps = 32/465 (6%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      M   +     V  N +I  F    R   A  L  +++   I  N  + NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF---------- 205
           +IK +C   K+  +      + + GF PD VT+NTL+   C    + EA           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M   GL    IT NT+++ LC E ++ EA  L+N    +G ++D V+YGT++ G 
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +      AL L  +M+E  I P    Y+A+I  L + G    A  + +E+L+ G+ P+ 
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N +I GFCS G+   A +    M+E+   PD++T N L+S   +EG L +A K    
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + +    D+VTYN++I   CK  R +DA  +   M      PD  T+  I      + R
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 442

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID------------------PSSISYSE 487
           ++E  +    +   G + +            E+D                  P +I+ + 
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +   C   + ++AL++FE  +   I ++   Y  +++G+ K  K
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 547



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 162/308 (52%), Gaps = 6/308 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +T+N ++ A  K+GKL E   L  +M  + + P+  TYN ++ G+CK     +A  +
Sbjct: 359 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 418

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            DLM      PDV T+N +I+ +C A  ++E  +L +E+    L+ +  TYNTLI+ F E
Sbjct: 419 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 474

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                 A  L  E+  HG+ P+ +T NI++  +C+  K+++A ++   ++ +    D V 
Sbjct: 475 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 534

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   CK   ++EA+ +   +   G++ +  T N ++   C +  + +A +L +   
Sbjct: 535 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 594

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+  D  +Y TLI G  +  + +++++L  EM+        FT   M+  L   G+ +
Sbjct: 595 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLD 653

Query: 308 QAI-DMLN 314
           ++  DML+
Sbjct: 654 KSFSDMLS 661



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 27/309 (8%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           K LD+A    +   +   +   V    +I  + R  + + A+ L+ +M+ R+I  + +++
Sbjct: 85  KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL-------- 345
           N +I       K   ++    +L + G  PD  TFNT++HG C E ++ +AL        
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 346 --QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
                ++MVE    P ++T N L++GLC EG + +A       + KG  +D VTY T+++
Sbjct: 205 TGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 264

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            +CK    + A  LLS+MEE  + PD   Y+AI   L + G   +AQ   S M+E G   
Sbjct: 265 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG--- 321

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P+  +Y+  I+  CS GR+ DA ++  +  ++ I  +  T+  L
Sbjct: 322 --------------IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 367

Query: 524 MNGLIKRRK 532
           ++  +K  K
Sbjct: 368 ISASVKEGK 376


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 242/462 (52%), Gaps = 3/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ--GLVPNRTTYNILVSGYCKL 58
           M   G  P  VTYNT+LD+ F++G++++   LL +M+ +  G +P+  TYN++++G  + 
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L++A ++VD M  +K     +T+N LI G+   G +E+A  L+ EME+  ++P VVTY
Sbjct: 282 GELEKAAQLVDRMRMSKKA-SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTY 340

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           NT+I+  F SG    A     E+   G+ P+ +T+N +I  YCK G + +A  +  +++ 
Sbjct: 341 NTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKR 400

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G +P  +TYN L+D  C+ G++EEA R    M  +G + +  T   +++     + L  
Sbjct: 401 AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAM 460

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                +    +G   D  +Y T I+        + A +L + M  R I   T TYN  + 
Sbjct: 461 VREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLD 520

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL +SG  + A  +  +++  G+ PD  T+  +IH  C  G++ +A    + M+     P
Sbjct: 521 GLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPP 580

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
             VT  + +   CR G L  A  +F+  + +G   + VTYN LI +LC+  R   A+   
Sbjct: 581 SAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHF 640

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EM E+ L P++YTY  +     + G  EEA +  S M + G
Sbjct: 641 HEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 241/516 (46%), Gaps = 20/516 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L AL  + + +++R + ++M + G+ P+  TYN L+  + + G + +A +++  M  
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259

Query: 74  NKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                LP   TYN++ING    G LE+A +L   M   K      T+N LI  +F  G  
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA-SAFTFNPLITGYFARGSV 318

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A  L  E++  GI P  VT+N +I    + G ++ A      M   G  PD +TYN+L
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  CKAGN++EA  +   + R GL  + +T N +L   C    L+EA        ++G 
Sbjct: 379 INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  +Y  L+ G  +        + +DEM  + + P  F YN  I      G T +A  
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +   ++  G+  D  T+N  + G C  G ++ A     KMV    +PD +T   L+   C
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G L +A   F   ++ G    +VTY   I + C+   L  A+G   +M E+ + P+  
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +  AL   GR   A +    M+E G                 + P+  +Y+  I+ 
Sbjct: 619 TYNVLIHALCRMGRTNLAYQHFHEMLERG-----------------LSPNKYTYTLLIDG 661

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +C +G +++A++++ E  Q GI  +  T+  L  G 
Sbjct: 662 NCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 193/387 (49%), Gaps = 36/387 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VTYNTI+  +F+ G +   R    +M+  GL+P+  TYN L++GYCK G 
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA+ +   + +    P V TYN+L++G+C  G LEEA R ++EM      PDV TY  
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 121 LIN------------RFFES-----------------------GRSMEAFKLIDELDEHG 145
           L+N             FF+                        G + EAF+L + +   G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I  + VT+NI +   CK G +  A  +   M  +G  PDC+TY  LI A+C+ G + EA 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M   GL  + +T    +H  C    L  AY       + G   +EV+Y  LI   
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R  + N A + + EM ER + P+ +TY  +I G  + G  E+AI + +E+ Q G+ PD 
Sbjct: 628 CRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDH 687

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMV 352
            T N +  GF  EGQ + A+Q+   +V
Sbjct: 688 CTHNALFKGF-DEGQSKHAIQYMENVV 713



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 224/461 (48%), Gaps = 20/461 (4%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M  +   P +   N+++    +    ++   +  EM  L + P +VTYNTL++ FF  GR
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246

Query: 131 SMEAFKLIDELDEH--GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
             +A KL+ E++    G  P+ VT+N++I    ++G+++KA ++V  M  +       T+
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTF 305

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI      G++E+A  +   M  +G+    +T NTI+H +     ++ A M       
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D ++Y +LI GY +      AL L+ ++K   + PS  TYN ++ G  + G  E+
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEE 425

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A     E+++ G  PD +T+  +++G      +    +F ++M+ K  +PD    N  +S
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRIS 485

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
                G   +A +     I +G + D+VTYN  +  LCK   L+DA+ L  +M    L P
Sbjct: 486 AELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQP 545

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  TY  +  A  E GRL EA+     M+ +G                 + PS+++Y+  
Sbjct: 546 DCITYTCLIHAHCERGRLREARDIFDGMLVSG-----------------LPPSAVTYTVF 588

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+ +C +G    A   F++  ++G+  N+ TY  L++ L +
Sbjct: 589 IHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCR 629



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 227/483 (46%), Gaps = 59/483 (12%)

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           AFR   EM    + P +   N ++    +  R  +   +  E+ + GI+P+ VT+N ++ 
Sbjct: 183 AFR---EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLD 239

Query: 159 WYCKEGKIDKACKIVRNME--ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
            + +EG++D+A K++R ME    G  P  VTYN +I+   + G +E+A +++D M R   
Sbjct: 240 SFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSK 298

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           K +  T N ++        +++A  L       G     V+Y T+I G FR      A  
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
            + EM+   ++P   TYN++I G  ++G  ++A+ +  +L ++G+ P   T+N ++ G+C
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG--------LCRE--------------- 373
             G +E+A +F  +MVE+  +PD+ T  IL++G        + RE               
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCF 478

Query: 374 ------------GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
                       G   +A +     I +G + D+VTYN  +  LCK   L+DA+ L  +M
Sbjct: 479 AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM 538

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKT--- 474
               L PD  TY  +  A  E GRL EA+     M+ +G     + + V      +    
Sbjct: 539 VSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNL 598

Query: 475 -----------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                       E + P+ ++Y+  I+  C  GR   A Q F E  ++G++ NK TY  L
Sbjct: 599 YSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLL 658

Query: 524 MNG 526
           ++G
Sbjct: 659 IDG 661



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 261 LITGYFRDE-KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL--L 317
           L+    RDE + +    ++ EM +  I PS  TYN ++    + G+ +QA  +L E+   
Sbjct: 201 LVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEAR 260

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G +P + T+N +I+G   +G++EKA Q  ++M   S K    T N L++G    G +E
Sbjct: 261 PGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVE 319

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           KA         +G     VTYNT+I  + +   +E A     EM    L PD  TY ++ 
Sbjct: 320 KAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLI 379

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
               ++G L+EA      +   G                 + PS ++Y+  ++ +C  G 
Sbjct: 380 NGYCKAGNLKEALWLFGDLKRAG-----------------LAPSVLTYNILLDGYCRLGD 422

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            ++A +  +E  ++G   + STY  LMNG  K R
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVR 456



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 20/257 (7%)

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           L  + EM    + P     N ++  L    + +    +  E+LQ G+ P   T+NT++  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 335 FCSEGQVEKALQFHNKMVEKSFK--PDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           F  EG+V++A +   +M  +     P  VT N++++GL R+G LEKA +      +  KA
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA 300

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             + T+N LI+       +E A  L  EME + + P   TY  I   +  SG +E A+  
Sbjct: 301 -SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              M   G +                 P  I+Y+  IN +C  G  K+AL +F + ++ G
Sbjct: 360 FVEMRAMGLL-----------------PDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402

Query: 513 IAINKSTYMNLMNGLIK 529
           +A +  TY  L++G  +
Sbjct: 403 LAPSVLTYNILLDGYCR 419


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/455 (33%), Positives = 241/455 (52%), Gaps = 11/455 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T N +++     G++N    +LS + K G  P+  T   L+ G C  G +K+A+  
Sbjct: 96  PDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHF 155

Query: 68  VD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            D L+ Q   L  V +Y  LING C  G    A +L + ++     P+VV YNT+I+   
Sbjct: 156 HDKLLAQGFRLDQV-SYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLC 214

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     EA  L  E+   GI  N VT++ +I  +C  GK+ +A   +  M     +PD  
Sbjct: 215 KRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVY 274

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNTL+DA  K G ++EA  ++ V+ +  LK N IT NT++           A  + N+ 
Sbjct: 275 IYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLID--------GYAKHVFNAV 326

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   D  SY  +I    + ++   AL L+ EM ++ ++P+T TYN++I GL +SG+ 
Sbjct: 327 GLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRI 386

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A D+++E+   G   +  T+N++I+G C  GQ++KA+   NKM ++  +PD+ T NIL
Sbjct: 387 SYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNIL 446

Query: 367 LSG-LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L G LC+   L+ A   F+  + KG   +  TYN +I   CKE  L++A+ L S+ME+  
Sbjct: 447 LHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSG 506

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             P+  T+  I  AL+E G  ++A+K    M+  G
Sbjct: 507 CSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 227/481 (47%), Gaps = 45/481 (9%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P +  +N +++ +           L + +E   + PD  T N LIN F   G+   AF +
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           + ++ + G +P+ VT   +IK  C +G++ KA      +   GF  D V+Y TLI+  CK
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G    A +++  +  +  + N +  NTI+  LC  K + EA  L +  S +G   + V+
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  +I G+    K   AL   +EM  + I P  + YN ++  L + GK ++A ++L  ++
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 318 QSGMIPDETTFNTIIHGF---------------------------CSEGQVEKALQFHNK 350
           ++ + P+  T+NT+I G+                           C   +VE+AL  + +
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKE 360

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M +K+  P+ VT N L+ GLC+ G +  A         +G   + +TYN+LI+ LCK  +
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQ 420

Query: 411 LEDAFGLLSEMEEKKLGPDRYTY-AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           L+ A  L+++M+++ + PD YT    +H  L +  RL+ AQ     +++ G         
Sbjct: 421 LDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG--------- 471

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     P+  +Y+  I  HC +G   +A  +  +    G + N  T+  ++  L++
Sbjct: 472 --------YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLE 523

Query: 530 R 530
           +
Sbjct: 524 K 524



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 212/442 (47%), Gaps = 25/442 (5%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           +++A      M  ++  P ++ +N +++ F +         L   L+   I+P+  T NI
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C  G+I+ A  ++  + + G+ PD VT  TLI   C  G +++A    D +  +G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            +++ ++  T+++ +C   +   A  LL     R    + V Y T+I    + +  + A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L+ EM  + I  +  TY+A+I G    GK  +A+  LNE++   + PD   +NT++   
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
             EG+V++A      +V+   KP+++T N L+ G  +          F +  L G   D 
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDV 335

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            +YN +I+ LCK +R+E+A  L  EM +K + P+  TY ++   L +SGR+  A      
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M + G  +H  V               I+Y+  IN  C  G+   A+ +  + + +GI  
Sbjct: 396 MHDRG--HHANV---------------ITYNSLINGLCKNGQLDKAIALINKMKDQGIQP 438

Query: 516 NKSTYMNLMNGLIKRRKSISKA 537
           +  T   L++GL+ + K +  A
Sbjct: 439 DMYTLNILLHGLLCKGKRLKNA 460



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 179/343 (52%), Gaps = 28/343 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V YNTI+D L K+  ++E  +L S+M  +G+  N  TY+ ++ G+C +G L EA+  
Sbjct: 201 PNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGF 260

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI----- 122
           ++ M      PDV+ YN L++     G ++EA  +   +    L P+V+TYNTLI     
Sbjct: 261 LNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK 320

Query: 123 ----------------------NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
                                 NR  +  R  EA  L  E+ +  + PN VT+N +I   
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGL 380

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK G+I  A  ++  M + G   + +TYN+LI+  CK G +++A  +++ M  +G++ + 
Sbjct: 381 CKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDM 440

Query: 221 ITLNTILHTLCCE-KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            TLN +LH L C+ K+L  A  L      +GY+ +  +Y  +I G+ ++   + A  L  
Sbjct: 441 YTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQS 500

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
           +M++    P+  T+  +I  L + G+T++A  +L E++  G++
Sbjct: 501 KMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 121/213 (56%), Gaps = 1/213 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  +YN +++ L K  ++ E  +L  +M ++ +VPN  TYN L+ G CK G +  A
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D M       +V TYN LING C  G L++A  L  +M+   + PD+ T N L++ 
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449

Query: 125 FFESGRSME-AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               G+ ++ A  L  +L + G  PN  T+NI+I  +CKEG +D+A  +   ME++G SP
Sbjct: 450 LLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           + +T+  +I A  + G  ++A +++  M  +GL
Sbjct: 510 NAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 139/351 (39%), Gaps = 81/351 (23%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           E  + AL  +  M   +  P    +N ++   ++       + +   L    + PD  T 
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+ FC  GQ+  A    +K+++  ++PD VT   L+ GLC +G ++KAL F    + 
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 389 KGKAVDSVTYNTLISS-----------------------------------LCKERRLED 413
           +G  +D V+Y TLI+                                    LCK + + +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV---------------- 457
           A  L SEM  K +  +  TY+AI       G+L EA  F + MV                
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281

Query: 458 ---ETGKINHQ----------VVQPNTSKTPEEID----------------PSSISYSEK 488
              + GK+              ++PN       ID                P   SY+  
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIM 341

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           IN  C   R ++AL +++E  QK +  N  TY +L++GL K  + IS A D
Sbjct: 342 INRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR-ISYAWD 391



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 1/113 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGK-LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           M+  G  PD  T N +L  L  KGK L   + L  D+  +G  PN  TYNI++ G+CK G
Sbjct: 431 MKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEG 490

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
            L EA  +   M  +   P+  T+ ++I      G  ++A +L  EM +  LL
Sbjct: 491 LLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 250/529 (47%), Gaps = 21/529 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY+ ++    + G+L         + K G   N    N L+ G C    L+EAM +
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 68  -VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTLIN 123
            +  M +    PDV +YN L+ G+CN    EEA  L   M   +     P+VV+Y T+IN
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF  G+  +A+ L  E+ + GI+PN VT+  +I   CK   +D+A  + + M + G  P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN LI      G  +E  RM++ M   GLK +  T  ++L+ LC   +  EA    
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  ++G   +   YG LI GY      +    L + M E  + P    +N +    ++ 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A+ + N++ Q G+ PD   F  +I   C  G+V+ A+   N+M+ +   P+I   
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC     EKA +F+   + +G   D V +NT++ +LC + ++  A  L+  ME 
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               PD  +Y  +       GR++EA K   +M+  G                 + P   
Sbjct: 512 VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG-----------------LKPDEW 554

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +Y+  ++ +C  GR  DA  +F E  + GI     TY  +++GL   R+
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 261/550 (47%), Gaps = 21/550 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC PD V+YNT+L     + +  E  +LL   +D + +   PN  +Y  +++G+  
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFT 215

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G + +A  +   M      P+V TY  +I+G C A +++ A  + ++M    + PD  T
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN LI+ +   G+  E  ++++E+  HG+KP+  T+  ++ + C  G+  +A     +M 
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  P+   Y  LI      G + E   ++++M   GL  +    N I      +  +D
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  + N   ++G   D V++G LI    +  + + A+  +++M    + P+ F +N+++
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           +GL    K E+A +   E+L  G+ PD   FNTI+   C++GQV KA +  + M     +
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD+++   L+ G C  G +++A K     +  G   D  TYNTL+   C+  R++DA+G+
Sbjct: 516 PDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSK 473
             EM    + P   TY+ I   L  + R  EA++    M+ +GK      + ++    SK
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635

Query: 474 T--------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                           ++      +++  I      GR +DA+ +F      G+  +  T
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFT 695

Query: 520 YMNLMNGLIK 529
           Y  +   LI+
Sbjct: 696 YCLIAENLIE 705



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 226/456 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PDN TYN ++      GK  EV  +L +M   GL P+  TY  L++  C  G  +EA
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               D M +    P+V  Y +LI+G+   G L E   L   M    L PD   +N +   
Sbjct: 328 RFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +     EA  + +++ + G+ P+ V    +I   CK G++D A      M   G +P+
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              +N+L+   C     E+A      M  +G++ + +  NTIL  LC + ++ +A  L++
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D +SY TLI G+    + + A K  D M    + P  +TYN ++ G  ++G
Sbjct: 508 LMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A  +  E+L++G+ P   T++TI+HG  +  +  +A + +  M+    + +I   N
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+L+GL +   +++A K F+S   K   ++  T+N +I +L K  R EDA  L + +   
Sbjct: 628 IILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSY 687

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L PD +TY  I   L+E G LEE     S M ++G
Sbjct: 688 GLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 218/454 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY ++L+ L   G+  E R     M ++G+ PN   Y IL+ GY   G 
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   +++LM +N   PD   +N++   +    M++EA  +  +M+   L PDVV +  
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGA 418

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ PN    N ++   C   K +KA +    M   G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V +NT++   C  G + +A R++D+M R G + + I+  T++   C   ++DEA 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+     G   DE +Y TL+ GY R  + + A  ++ EM    I P   TY+ ++ GL
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + +  +A ++   ++ SG   +   +N I++G      V++A +    +  K F+ +I
Sbjct: 599 FTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEI 658

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  E A+  F +    G   D  TY  +  +L +E  LE+   L S 
Sbjct: 659 TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSA 718

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           ME+    P+     A+   L+  G +  A  + S
Sbjct: 719 MEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLS 752



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 210/436 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+   Y  ++     KG L+E+ DLL+ M + GL P+   +NI+ + Y K   + EA
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M + + M Q    PDV  +  LI+  C  G +++A     +M +  + P++  +N+L+  
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                +  +A +   E+   GI+P+ V  N ++   C +G++ KA +++  ME  G  PD
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++Y TLI  +C  G ++EA + +DVM   GLK +  T NT+LH  C   ++D+AY +  
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G     V+Y T++ G F   + + A +L+  M       + + YN ++ GLS++ 
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  +   L       + TTFN +I      G+ E A+     +      PD+ T  
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYC 697

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++   L  EG LE+    F +    G   +S   N L+  L     +  A   LS+++EK
Sbjct: 698 LIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEK 757

Query: 425 KLGPDRYTYAAIHTAL 440
               +  T A + + L
Sbjct: 758 NFSLEASTTAMLISLL 773



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 199/404 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+  +N I  A  KK  ++E   + + MK+QGL P+   +  L+   CKLG + +A
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDA 432

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   + M      P+++ +N L+ G C     E+A     EM +  + PDVV +NT++  
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+ M+A +LID ++  G +P+ +++  +I  +C  G+ID+A K +  M   G  PD
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYNTL+   C+AG +++A+ +   M R G+    +T +TILH L   ++  EA  L  
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +    G   +   Y  ++ G  ++   + A KL+  +  +       T+N MI  L +SG
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSG 672

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A+ +   +   G++PD  T+  I      EG +E+     + M +    P+    N
Sbjct: 673 RNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLN 732

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            L+  L   G + +A  +      K  ++++ T   LIS L ++
Sbjct: 733 ALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRD 776



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 217/477 (45%), Gaps = 59/477 (12%)

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           ++K+ PD+ TY+ LI  F   GR    F     + + G + N +  N ++K  C   ++ 
Sbjct: 87  TIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLR 146

Query: 168 KACKI-VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR---KGLKMNTITL 223
           +A  I ++ M E G +PD V+YNTL+   C     EEA  ++ +M     +    N ++ 
Sbjct: 147 EAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSY 206

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
            T+++    E ++D+AY L      RG   + V+Y T+I G  + +  +RA  ++ +M +
Sbjct: 207 ATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID 266

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           + + P   TYN +I G    GK ++ + ML E+   G+ PD  T+ ++++  C+ G+  +
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL--------------------------- 376
           A  F + M+ K  KP++    IL+ G   +G L                           
Sbjct: 327 ARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386

Query: 377 --------EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
                   ++A+  F     +G + D V +  LI +LCK  R++DA    ++M  + + P
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----------SKTPEE 477
           + + + ++   L    + E+A++F   M+  G I   VV  NT            K    
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG-IRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 478 ID--------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ID        P  ISY+  I  HC  GR  +A +  +     G+  ++ TY  L++G
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 172/385 (44%), Gaps = 56/385 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL------------------ 223
           +PD  TY+ LI   C+ G +E  F    ++ + G ++N I +                  
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 224 ------------------NTILHTLCCEKKLDEAYMLLN---SASKRGYYLDEVSYGTLI 262
                             NT+L   C EK+ +EA  LL+    +  R    + VSY T+I
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+F + + ++A  L+ EM +R I P+  TY  +I GL ++   ++A  +  +++  G+ 
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+N +IHG+ S G+ ++ ++   +M     KPD  T   LL+ LC  G   +A  F
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F S I KG   +   Y  LI     +  L +   LL+ M E  L PD + +  I TA  +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
              ++EA    + M + G                 + P  +++   I+  C  GR  DA+
Sbjct: 391 KAMIDEAMHIFNKMKQQG-----------------LSPDVVNFGALIDALCKLGRVDDAV 433

Query: 503 QIFEETRQKGIAINKSTYMNLMNGL 527
             F +   +G+A N   + +L+ GL
Sbjct: 434 LKFNQMMNEGVAPNIFVFNSLVYGL 458



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 126/282 (44%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD ++Y T++      G+++E    L  M   GL P+  TYN L+ GYC+ G 
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  V   M +N   P V TY+ +++G        EA  L   M +     ++  YN 
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++    EAFKL   L     +    T NIMI    K G+ + A  +   +   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  + +   + G +EE   +   M + G   N+  LN ++  L     +  A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
             L+   ++ + L+  +   LI+   RDE  + A  L ++ +
Sbjct: 749 AYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYR 790


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 248/515 (48%), Gaps = 18/515 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   +++TY+ ++D+  ++G+++     L  M K  +      YN L++GYCKLG    A
Sbjct: 222 GLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               D M      P V TY  LI+G+CN G   +AF++  EM +  + P+  T+  +I+ 
Sbjct: 282 KYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISG 341

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +    EA +L  E+ E  I P+ VT+N+MI+ +C+ G I +A  ++  M   GF PD
Sbjct: 342 LCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPD 401

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  LI   C  G + EA   +D + +   K+N +  + ++H  C E +  +A     
Sbjct: 402 TYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACR 461

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG  +D V Y  LI G  R+        L  EM    + P    Y  MI   S++G
Sbjct: 462 VMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAG 521

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  + + ++  G +P+  T+  +I+G C  G ++KA     + +     P+ +T  
Sbjct: 522 NLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYG 581

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             L  L R G +EKA++   + +LKG    +V+YN LI   C+  ++E+A  LL  M + 
Sbjct: 582 CFLDHLTRGGNMEKAVQLHHA-MLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDN 640

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + PD  TY+ I     +   L+EA K    M++ G                 + P +++
Sbjct: 641 DILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKG-----------------LKPDTLA 683

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           YS  ++  C  G  + A ++ +E  ++G+  N  T
Sbjct: 684 YSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 257/532 (48%), Gaps = 27/532 (5%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+  T + +L+ L +  + N+V  L  D+    + P+   Y+ +V   C+L    +A  
Sbjct: 93  MPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKE 152

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M  N+    +  YN+LI+G C +  + EA  ++  +    L  +VVTY        
Sbjct: 153 MIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY-------- 204

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+  EA  L  E+ E G+  N +T++I+I  +C+ G++D A   +  M +        
Sbjct: 205 -YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVY 263

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN+LI+  CK GN   A    D M  KGL    +T  +++   C E +  +A+ + N  
Sbjct: 264 PYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEM 323

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           + +G   +  ++  +I+G  R      A++L+ EMKER+IMPS  TYN MI G  +SG  
Sbjct: 324 TAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNI 383

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L+E++  G +PD  T+  +I G CS G+V +A +F + + +   K + +  + L
Sbjct: 384 SEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSAL 443

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+EG  + A+   R  + +G A+D V Y  LI    +E      FGLL EM    L
Sbjct: 444 VHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGL 503

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD   Y  +     ++G L+EA     IMV+ G +                 P+ ++Y+
Sbjct: 504 RPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCL-----------------PNVVTYT 546

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             IN  C  G    A  + +ET    +  N  TY   ++ L  R  ++ KAV
Sbjct: 547 ALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHL-TRGGNMEKAV 597



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 204/397 (51%), Gaps = 1/397 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  T+  I+  L +   + E   L  +MK++ ++P+  TYN+++ G+C+ G 
Sbjct: 323 MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGN 382

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  ++D M     +PD +TY  LI+G C+ G + EA     ++       + + Y+ 
Sbjct: 383 ISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSA 442

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ + + GR  +A      + E G+  + V + I+I    +E        +++ M  +G
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y  +ID + KAGN++EAF + D+M  +G   N +T   +++ LC    +D+A 
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +L           + ++YG  +    R     +A++L   M  +  + +T +YN +I G 
Sbjct: 563 LLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGF 621

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK E+A  +L+ +  + ++PD  T++TII+  C    +++A++  + M++K  KPD 
Sbjct: 622 CRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDT 681

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           +  + L+ G C  G LEKA +     I +G   + VT
Sbjct: 682 LAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 210/421 (49%), Gaps = 26/421 (6%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M+   L+P+V T + L+N      R  +   L D++    ++P+   ++ +++  C+   
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
            +KA +++  ME N      V YN LI   CK+  + EA  + + + +KGL+ N +T   
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY-- 204

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
                    K +EA +L     ++G   + ++Y  LI  + R  + + A+   D+M +  
Sbjct: 205 -------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I  + + YN++I G  + G    A    +E++  G+ P   T+ ++I G+C+EG+  KA 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           + +N+M  K   P+  T   ++SGLCR  ++ +A++ F     +      VTYN +I   
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C+   + +AF LL EM  K   PD YTY  + + L   GR+ EA++F     +  K +H+
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVD---DLHKDHHK 434

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
           +              +++ YS  ++ +C +GR+KDA+       ++G+A++   Y  L++
Sbjct: 435 L--------------NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILID 480

Query: 526 G 526
           G
Sbjct: 481 G 481



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 227/496 (45%), Gaps = 63/496 (12%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           LM     +P+V T + L+NG        +   L  ++ S  + PD+  Y+ ++    E  
Sbjct: 86  LMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELK 145

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE-------------------------- 163
              +A ++I  ++ +  K + V +N++I   CK                           
Sbjct: 146 DFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY 205

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           GK ++A  + + M E G   + +TY+ LID+ C+ G M+ A   +D M +  ++      
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDE----------VSYGTLITGYFRDEKANR 273
           N++++  C           L +AS   YY DE          V+Y +LI+GY  + + ++
Sbjct: 266 NSLINGYC----------KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK 315

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A K+++EM  + I P+T+T+ A+I GL ++    +AI +  E+ +  ++P E T+N +I 
Sbjct: 316 AFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C  G + +A    ++MV K F PD  T   L+SGLC  G + +A +F          +
Sbjct: 376 GHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKL 435

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +++ Y+ L+   CKE R +DA      M E+ +  D   YA +   +  + R  + +   
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAIL---IDGTAREHDTRALF 492

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            ++ E    NH             + P ++ Y+  I+ H   G  K+A  +++    +G 
Sbjct: 493 GLLKEMH--NHG------------LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGC 538

Query: 514 AINKSTYMNLMNGLIK 529
             N  TY  L+NGL K
Sbjct: 539 LPNVVTYTALINGLCK 554


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 240/453 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N +++     G LN    +L+ + K G  P+  T   L+ G C  G ++EA+  
Sbjct: 97  PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D +       D  +Y  LING C  G    A ++ ++++ L + P+VV YNT+I+   +
Sbjct: 157 HDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCK 216

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
               + A  L  E+    I P+ VT+  +I      G++ +A  +   M      PD  T
Sbjct: 217 DKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYT 276

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N L+D  CK G M++A  ++ VM ++G+  N +T N+++      K+ ++A  + N+ +
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA 336

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RG   D  SY  +I G  + +  + A+ L+ EM  + + P+T TYN++I GL + G+  
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A D++NE+   G   D  T+++++   C   QV+KA+    K+ ++  +P+I T  IL+
Sbjct: 397 DAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILV 456

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G L+ A   ++  ++KG  +D   YN +++ LCKE   ++A  L+S+ME+    
Sbjct: 457 DGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           PD  TY  +  AL E+ + ++A K    M+  G
Sbjct: 517 PDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 235/450 (52%), Gaps = 17/450 (3%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           ++ +N +++          A    K+ME  ++ PD+ T+N LIN F   G    AF ++ 
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           ++ + G  P+ VT   +IK  C  GK+ +A     ++   GF  D V+Y TLI+  CK G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
               A +++  +    ++ N +  NTI+ +LC +K +  A  L +    +  + D V+Y 
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           TLI G     +   A+ L+++M  + I P  +T+N ++ GL + G+ ++A ++L  +++ 
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+  +  T+N+++ G+    Q  KA    N M  +   PD+ + +I+++GLC+  ++++A
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
           +  F+    K  A ++VTYN+LI  L K  R+ DA+ L++EM  +    D  TY+++  A
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDA 423

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L ++ ++++A    +      KI  Q +QPN             +Y+  ++  C  GR K
Sbjct: 424 LCKNHQVDKAITLIT------KIKDQGIQPNIY-----------TYTILVDGLCKNGRLK 466

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           DA  ++++   KG  ++   Y  ++NGL K
Sbjct: 467 DAQAVYQDLLIKGYHLDVKMYNVMVNGLCK 496



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 216/418 (51%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VT  T++  L   GK+ E      D+  +G   ++ +Y  L++G CK G  + 
Sbjct: 128 LGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRA 187

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++V+  +      P+V  YN +I+  C   ++  A  L  EM   ++ PDVVTY TLI 
Sbjct: 188 ALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIY 247

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                GR  EA  L +++    IKP+  T NI++   CKEG++ KA  ++  M + G   
Sbjct: 248 GCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDS 307

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN+L+D         +A  + + M R+G+  +  + + +++ LC  K +DEA  L 
Sbjct: 308 NIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLF 367

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +    + V+Y +LI G  +  + + A  L +EM  R       TY++++  L ++
Sbjct: 368 KEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + ++AI ++ ++   G+ P+  T+  ++ G C  G+++ A   +  ++ K +  D+   
Sbjct: 428 HQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMY 487

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           N++++GLC+EG+ ++AL         G   D+VTY TL+ +L +  + + A  LL EM
Sbjct: 488 NVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 197/387 (50%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V+Y T+++ L K G+      +L  +    + PN   YN ++   CK   +  A  + 
Sbjct: 168 DQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLC 227

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M   +  PDV TY  LI G    G L+EA  L  +M    + PDV T+N L++   + 
Sbjct: 228 SEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKE 287

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +A  ++  + + G+  N VT+N ++  Y    + +KA  +   M   G +PD  +Y
Sbjct: 288 GEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSY 347

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           + +I+  CK   ++EA  +   M  K +  NT+T N+++  L    ++ +A+ L+N    
Sbjct: 348 SIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN 407

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   D ++Y +L+    ++ + ++A+ L  ++K++ I P+ +TY  ++ GL ++G+ + 
Sbjct: 408 RGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKD 467

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +  +LL  G   D   +N +++G C EG  ++AL   +KM +    PD VT   L+ 
Sbjct: 468 AQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVR 527

Query: 369 GLCREGILEKALKFFRSWILKGKAVDS 395
            L      +KA+K  R  I++G AV S
Sbjct: 528 ALFENDKNDKAVKLLREMIVQGSAVGS 554



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 29/413 (7%)

Query: 137 LIDELDEHGIKPNAVTH-----------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ID +D+     N + H           N ++    K      A    + ME     PD 
Sbjct: 40  FIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDL 99

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            T+N LI+  C  G++  AF ++  + + G   +T+T+ T++  LC   K+ EA    + 
Sbjct: 100 FTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDD 159

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +G++LD+VSYGTLI G  +  +   AL++  ++    + P+   YN +I  L +   
Sbjct: 160 VIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKL 219

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
              A D+ +E++   + PD  T+ T+I+G    G++++A+   N+M+ K+ KPD+ T NI
Sbjct: 220 VIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNI 279

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GLC+EG ++KA       I +G   + VTYN+L+      ++   A  + + M  + 
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + PD  +Y+ +   L ++  ++EA       V   K  H           + + P++++Y
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEA-------VNLFKEMHS----------KSMAPNTVTY 382

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +  I+     GR  DA  +  E   +G   +  TY +L++ L K  + + KA+
Sbjct: 383 NSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQ-VDKAI 434



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG 40
           ME  GC+PD VTY T++ ALF+  K ++   LL +M  QG
Sbjct: 510 MEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 267/522 (51%), Gaps = 20/522 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +LD   +  +  E  +LL +      +P+  T+N+L++GYC     +EA  V+  M
Sbjct: 61  TGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREM 120

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
            ++  + P + T+N++++G C +G +  A    +   +     D+ TY  +++   ++ +
Sbjct: 121 EEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKK 180

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A  L++++  +G  P   T+N ++   CK G++++A  ++R + +NG +PD VTY +
Sbjct: 181 IQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 240

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID   K     EA+++   M  +GL ++T+    ++  L    K+ +A  +  + + +G
Sbjct: 241 LIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 300

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+  T+I G  +  +   A++++  M+ R + P+   Y+A+I GL ++ K + A+
Sbjct: 301 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 360

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           +ML ++ ++   PD  T+N +I G C  G VE A  F ++M+E   KPD+ T NIL+SG 
Sbjct: 361 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGF 420

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G  + A   F        + + VTY TLIS LCK R+L  A      M+E+   PD 
Sbjct: 421 CKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDS 480

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           + Y+++   L +SG+LE        M  +G  N Q                  + +  I 
Sbjct: 481 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ------------------TRTRLIF 522

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             C   R  +A+ +F   R++G+  +   Y ++++ LIK  K
Sbjct: 523 HLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISTLIKSAK 563



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 224/450 (49%), Gaps = 2/450 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E +G  P   T+N +L  L K GK+    D        G   +  TY  +V    K   +
Sbjct: 122 EDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKI 181

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           ++A+ +++ +T N   P + TYN L+NG C  G LEEA  L +++      PDVVTY +L
Sbjct: 182 QDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 241

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+   +  RS EA+KL  E+   G+  + V +  +I+   + GKI +A  + + M   G 
Sbjct: 242 IDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGC 301

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VT +T+ID  CKAG +  A R+   M  +GL  N +  + ++H LC  +K+D A  
Sbjct: 302 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 361

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L    K     D ++Y  LI G  +      A   +DEM E    P  +TYN ++ G  
Sbjct: 362 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFC 421

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G T+ A  + +++  S   P+  T+ T+I G C   Q+ KA  +   M E+   PD  
Sbjct: 422 KAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSF 481

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             + L+ GLC+ G LE     F      G A +S T   LI  LCK  R+++A  L + +
Sbjct: 482 VYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAI 540

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            ++ + P  Y Y +I + L++S ++    +
Sbjct: 541 RKEGM-PHPYAYNSIISTLIKSAKVNPCTR 569



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 218/489 (44%), Gaps = 54/489 (11%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           V T N L++ +       EA  L K   +   LPDV T+N LI  +  +    EAF +I 
Sbjct: 59  VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118

Query: 140 ELDE-HGIKPNAVTHNIMIKWYCKEG---------------------------------- 164
           E++E +G+ P+  THN+++   CK G                                  
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKN 178

Query: 165 -KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
            KI  A  ++  +  NG +P   TYN L++  CK G +EEA  ++  +   G   + +T 
Sbjct: 179 KKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 238

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
            +++  L  EK+  EAY L    + RG  LD V Y  LI G  +  K  +A  ++  M  
Sbjct: 239 TSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTS 298

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           +  +P   T + MI GL ++G+   A+ +   +   G+ P+E  ++ +IHG C   +++ 
Sbjct: 299 QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 358

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL+   +M +    PD +T NIL+ GLC+ G +E A  FF   +  G   D  TYN L+S
Sbjct: 359 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVS 418

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
             CK    + A G+  +M      P+  TY  + + L +  +L +A  +   M E G   
Sbjct: 419 GFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG--- 475

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                           P S  YS  ++  C  G+ +    +F+E  + G+A N  T   L
Sbjct: 476 --------------CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRL 520

Query: 524 MNGLIKRRK 532
           +  L K  +
Sbjct: 521 IFHLCKANR 529



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 195/424 (45%), Gaps = 53/424 (12%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G + +  T N ++  + +  +  +A  +++N     F PD  T+N LI   C A   EEA
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 205 FRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           F ++  M    G+  +  T N +LH LC   K+  A     + +  G  +D  +Y  ++ 
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              +++K   A+ L +++      P+  TYNA++ GL + G+ E+AID+L +++ +G  P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 324 DETTFNTIIHGFCSE-----------------------------------GQVEKALQFH 348
           D  T+ ++I G   E                                   G++ +A   +
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             M  +   PD+VT + ++ GLC+ G +  A++ F+S   +G A + V Y+ LI  LCK 
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           R+++ A  +L++M++    PD  TY  +   L +SG +E A+ F   M+E G        
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG-------- 405

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P   +Y+  ++  C  G    A  +F++      + N  TY  L++GL 
Sbjct: 406 ---------CKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLC 456

Query: 529 KRRK 532
           KRR+
Sbjct: 457 KRRQ 460



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 142/272 (52%), Gaps = 2/272 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD VT +T++D L K G++     +   M+ +GL PN   Y+ L+ G CK   
Sbjct: 296 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 355

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M +    PD  TYN+LI+G C +G +E A     EM      PDV TYN 
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F ++G +  A  + D++      PN VT+  +I   CK  ++ KA    ++M+E G
Sbjct: 416 LVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG 475

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   Y++L+D  CK+G +E    + D M R G+  N+ T   ++  LC   ++DEA 
Sbjct: 476 CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAV 534

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            L N+  K G      +Y ++I+   +  K N
Sbjct: 535 SLFNAIRKEGMP-HPYAYNSIISTLIKSAKVN 565



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 148/321 (46%), Gaps = 18/321 (5%)

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           R G + +  T N +L      K+  EA  LL +     +  D  ++  LITGY    +  
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 273 RALKLWDEMKER-QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            A  +  EM+E   + PS  T+N ++ GL +SGK   A+D       +G   D  T+  I
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +       +++ A+    K+      P I T N LL+GLC+ G LE+A+   R  +  G 
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VTY +LI  L KE+R  +A+ L  EM  + L  D   Y A+   L+++G++ +A  
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G +                 P  ++ S  I+  C  GR   A++IF+    +
Sbjct: 292 VYKTMTSQGCV-----------------PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334

Query: 512 GIAINKSTYMNLMNGLIKRRK 532
           G+A N+  Y  L++GL K RK
Sbjct: 335 GLAPNEVVYSALIHGLCKARK 355



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 19/198 (9%)

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           F+  + T N LL    R     +A    ++ +      D  T+N LI+  C  R  E+AF
Sbjct: 55  FQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAF 114

Query: 416 GLLSEMEEK-KLGPDRYTYAAIHTALVESGRLEEA----------------QKFTSIM-- 456
            ++ EMEE   + P   T+  +   L +SG++  A                  +T+I+  
Sbjct: 115 AVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDW 174

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           +   K     V      T     P+  +Y+  +N  C  GR ++A+ +  +    G   +
Sbjct: 175 LAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 234

Query: 517 KSTYMNLMNGLIKRRKSI 534
             TY +L++GL K ++S 
Sbjct: 235 VVTYTSLIDGLGKEKRSF 252


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 169/585 (28%), Positives = 267/585 (45%), Gaps = 89/585 (15%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P   T+ +++ A   +G + E   L  +M   G   N      L+ GYC  G L  A
Sbjct: 285 GWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSA 344

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + +T++   P+  TY++LI G CN+G +E+A  L  +M+   + P V   N+L+  
Sbjct: 345 LNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRG 404

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++    EA KL DE  + G+  N  T+NIM+ W CK GK+D+AC ++ NM   G  P+
Sbjct: 405 YLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 463

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YN +I  +C+ GNM+ A  +   M  + LK N +T                      
Sbjct: 464 VVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVT---------------------- 501

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                        Y  LI G F+   + +AL L+D+M    I P+ FT+N +I GL + G
Sbjct: 502 -------------YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVG 548

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A D L   L+ G IP   T+N+I+ GF  EG ++ AL  + +M E    P++VT  
Sbjct: 549 QMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYT 608

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++G C+   ++ ALK       KG  +D   Y+ LI   CK R +E A  L  E+ E 
Sbjct: 609 SLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV 668

Query: 425 KLGPDRY-----------------------------------TYAAIHTALVESGRLEEA 449
            L P+R                                    TY  +   L++ GRL  A
Sbjct: 669 GLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 728

Query: 450 QKFTSIMVETGKIN-----HQVVQ--------PNTSKTPEEID-----PSSISYSEKINE 491
                 M+  G +      H +V          N  K  EE+D     PS + Y+  I  
Sbjct: 729 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 788

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
           +  +G  K+A  + +E   +G+  +  TY  L+NG  K  +S+S+
Sbjct: 789 YFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSR 833



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 219/411 (53%), Gaps = 3/411 (0%)

Query: 2   EGFGCLPDNV-TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           E   C   N+ TYN ++  L K GK++E   LL +M  QG+VPN  +YN ++ G+C+ G 
Sbjct: 420 EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 479

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  V   M      P+V TY++LI+G    G  E+A  L  +M SL + P   T+NT
Sbjct: 480 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 539

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + G+  EA   +    E G  P+ +T+N ++  + KEG ID A  + R M E G
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 599

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ VTY +LI+  CK+  ++ A +  D M  KGL+++    + ++   C  + ++ A 
Sbjct: 600 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 659

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW-DEMKERQIMPSTFTYNAMIWG 299
            L     + G   + + Y ++I+G FRD     A  +W  +M   +I     TY  +I G
Sbjct: 660 DLFFELLEVGLSPNRIVYNSMISG-FRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDG 718

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+   A D+  E+L  G++PD  TF+ +++G C++GQ+E A +   +M  K+  P 
Sbjct: 719 LLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPS 778

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           ++  N L++G  REG L++A       + +G   D VTY+ LI+   K  R
Sbjct: 779 VLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 260/530 (49%), Gaps = 18/530 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D+ T + ++ A  K+G++ E  +   + K++G+  +   Y+I++   CK       
Sbjct: 215 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 274

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +++ M +   +P   T+  +I      G + EA RL++EM +     ++V   +L+  
Sbjct: 275 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 334

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G    A  L +++ E G+ PN VT++++I+  C  G I+KA ++   M+ NG  P 
Sbjct: 335 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 394

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               N+L+    KA   EEA ++ D     G+  N  T N ++  LC   K+DEA  LL+
Sbjct: 395 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 453

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +   +G   + VSY  +I G+ R    + A  ++ +M  R + P+  TY+ +I G  + G
Sbjct: 454 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 513

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            +E+A+D+ +++L   + P + TFNTII+G C  GQ+ +A       +E+ F P  +T N
Sbjct: 514 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 573

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G  +EG ++ AL  +R     G + + VTY +LI+  CK  R++ A     EM EK
Sbjct: 574 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 633

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  D   Y+A+     +   +E AQ     ++E G                 + P+ I 
Sbjct: 634 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG-----------------LSPNRIV 676

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           Y+  I+        + AL  +++     I  +  TY  L++GL+K  + +
Sbjct: 677 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLV 726



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 246/537 (45%), Gaps = 51/537 (9%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           V  L++  K+     +   +N L++ Y +   ++ A+   + M     +P V   N+L+ 
Sbjct: 134 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 193

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                 M+ E   L  +M    +  D  T + ++    + GR  EA +   E  E G+K 
Sbjct: 194 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 253

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +A  ++I+I+  CK+   +   +++  M+E G+ P   T+ ++I A    GNM EA R+ 
Sbjct: 254 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 313

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M   G  MN +   +++   C +  LD A  L N  ++ G + ++V+Y  LI G    
Sbjct: 314 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 373

Query: 269 EKANRALKLWDEMKERQIMPST----------------------------------FTYN 294
               +A +L+ +MK   I PS                                   FTYN
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN 433

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            M+  L + GK ++A  +L+ ++  GM+P+  ++N +I G C +G ++ A    + M+ +
Sbjct: 434 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR 493

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KP++VT +IL+ G  ++G  EKAL  F   +    A    T+NT+I+ LCK  ++ +A
Sbjct: 494 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 553

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
              L    E+   P   TY +I    ++ G ++ A      M E G              
Sbjct: 554 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG-------------- 599

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
              + P+ ++Y+  IN  C   R   AL+  +E R+KG+ ++ + Y  L++G  KRR
Sbjct: 600 ---VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 653


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 224/419 (53%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           V  L+ +M+ +GL PN  TYN ++   CK G + EA RV+  M      PD   Y  LI+
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G+C  G +  A+RL  EM+  K+ PD +TY  +I    ++GR MEA KL  E+    ++P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           + VT+  +I  YCKEGK+ +A  +   M + G +P+ VTY  L D  CK G ++ A  ++
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M RKGL++N  T N++++ LC    +D+A  L+      G++ D V+Y TL+  Y + 
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +  RA +L  +M +R++ P+  T+N ++ G   SG  E    +L  +L+ G++P+ TT+
Sbjct: 447 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY 506

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N++I  +C    +    + +  M  K   PD  T NIL+ G C+   +++A    R  + 
Sbjct: 507 NSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVG 566

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           KG  +   +YN LI    K ++  +A  L  +M  + L  DR  Y        + G++E
Sbjct: 567 KGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 625



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 196/425 (46%), Gaps = 35/425 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y T++D   K G ++    L  +M+K+ + P+  TY  ++ G C+ G + EA
Sbjct: 253 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 312

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   M   +  PD  TY  LI+G+C  G ++EAF L  +M  + L P++VTY  L + 
Sbjct: 313 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 372

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A +L+ E+   G++ N  T+N ++   CK G ID+A K++++ME  GF PD
Sbjct: 373 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 432

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TL+DA CK+  M  A  ++  M  + L+   +T N +++  C    L++   LL 
Sbjct: 433 AVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 492

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                                            W  M E+ IMP+  TYN++I       
Sbjct: 493 ---------------------------------W--MLEKGIMPNATTYNSLIKQYCIRN 517

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
                 ++   +   G++PD  T+N +I G C    +++A   H  MV K F   + + N
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 577

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  +     +A + F     +G   D   YN        E ++E    L  E  EK
Sbjct: 578 ALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEK 637

Query: 425 KLGPD 429
            L  D
Sbjct: 638 CLVGD 642



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 218/441 (49%), Gaps = 7/441 (1%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCK-LGWLKEAMR---VVDLM--TQNKSL-PDVW 81
            R L   M   GL+ +  + N+ +S   + L  +K A++   V+ L+   Q K L P+ +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           TYN +I   C  G + EA R+ +EM S  + PD V Y TLI+ F + G    A++L DE+
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            +  I P+ +T+  +I   C+ G++ +A K+   M      PD VTY  LID  CK G M
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           +EAF + + M + GL  N +T   +   LC   ++D A  LL+   ++G  L+  +Y +L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           + G  +    ++A+KL  +M+     P   TY  ++    +S +  +A ++L ++L   +
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P   TFN +++GFC  G +E   +    M+EK   P+  T N L+   C    +    +
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            +R    KG   D  TYN LI   CK R +++A+ L  +M  K       +Y A+     
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584

Query: 442 ESGRLEEAQKFTSIMVETGKI 462
           +  +  EA++    M   G +
Sbjct: 585 KRKKFLEARELFEQMRREGLV 605



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 186/380 (48%), Gaps = 18/380 (4%)

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           K++  M+  G  P+  TYN +I   CK G + EA R++  M  +G+  + +   T++   
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C    +  AY L +   KR    D ++Y  +I G  +  +   A KL+ EM  +++ P  
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TY A+I G  + GK ++A  + N++LQ G+ P+  T+  +  G C  G+V+ A +  ++
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M  K  + +I T N L++GLC+ G +++A+K  +   + G   D+VTY TL+ + CK R 
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---------- 460
           +  A  LL +M +++L P   T+  +      SG LE+ +K    M+E G          
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508

Query: 461 KINHQVVQPNTSKTPE--------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
            I    ++ N   T E         + P   +Y+  I  HC     K+A  +  +   KG
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568

Query: 513 IAINKSTYMNLMNGLIKRRK 532
             +  S+Y  L+ G  KR+K
Sbjct: 569 FNLTVSSYNALIKGFYKRKK 588



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 170/329 (51%), Gaps = 21/329 (6%)

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E   ++++ M  KGLK N  T N ++  LC   K+ EA  +L      G   D V Y TL
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G+ +    + A +L+DEM++R+I P   TY A+I GL Q+G+  +A  + +E++   +
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PDE T+  +I G+C EG++++A   HN+M++    P+IVT   L  GLC+ G ++ A +
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                  KG  ++  TYN+L++ LCK   ++ A  L+ +ME     PD  TY  +  A  
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           +S  +  A +    M++                  E+ P+ ++++  +N  C  G  +D 
Sbjct: 445 KSREMVRAHELLRQMLD-----------------RELQPTVVTFNVLMNGFCMSGMLEDG 487

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            ++ +   +KGI  N +TY    N LIK+
Sbjct: 488 EKLLKWMLEKGIMPNATTY----NSLIKQ 512



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 24/269 (8%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ-------SGKTEQAIDMLNELLQSG 320
           D   + A KL+D+M    ++ S  + N  I  LS+       + K E  + ++ E+   G
Sbjct: 159 DVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKG 218

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+  T+N +I   C  G+V +A +   +M+ +   PD V    L+ G C+ G +  A 
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           + F     +  + D +TY  +I  LC+  R+ +A  L  EM  K+L PD  TY A+    
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G+++EA    + M++ G                 + P+ ++Y+   +  C  G    
Sbjct: 339 CKEGKMKEAFSLHNQMLQMG-----------------LTPNIVTYTALADGLCKCGEVDT 381

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           A ++  E  +KG+ +N  TY +L+NGL K
Sbjct: 382 ANELLHEMCRKGLELNIYTYNSLVNGLCK 410



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 106/225 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VTY T++DA  K  ++    +LL  M  + L P   T+N+L++G+C  G 
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 483

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++  +++  M +   +P+  TYN LI  +C    +     + + M +  ++PD  TYN 
Sbjct: 484 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 543

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++    EA+ L  ++   G      ++N +IK + K  K  +A ++   M   G
Sbjct: 544 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
              D   YN   D N   G ME    + D    K L  +  T NT
Sbjct: 604 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 24/199 (12%)

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE--GIL-----EKALKFFRSWILKGKAV 393
           V  A +  +KM+       + +CN+ +S L  +  GI      E  LK      +KG   
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +  TYN +I  LCK  ++ +A  +L EM  + + PD   Y  +     + G +  A +  
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M                    +I P  I+Y+  I   C  GR  +A ++F E   K +
Sbjct: 282 DEM-----------------QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324

Query: 514 AINKSTYMNLMNGLIKRRK 532
             ++ TY  L++G  K  K
Sbjct: 325 EPDEVTYTALIDGYCKEGK 343


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/442 (32%), Positives = 238/442 (53%), Gaps = 1/442 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +T NT+++ L   GK  E   L+  M + G  PN  TY  +++  CK G    AM +
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +     D   Y+++I+G C  G L+ AF L  EME   +  +++TYN LI  F  
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +GR  +  KL+ ++ +  I PN VT +++I  + KEGK+ +A ++ + M   G +PD +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +LID  CK  ++++A +M+D+M  KG   N  T N +++  C   ++D+   L    S
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   D V+Y TLI G+    K N A +L+ EM  R++ P+  TY  ++ GL  +G++E
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  ++ +S M  D   +N IIHG C+  +V+ A      +  K  KP + T NI++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC++G L +A   FR     G A D  TYN LI +   +     +  L+ E++     
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610

Query: 428 PDRYTYAAIHTALVESGRLEEA 449
            D  T   +   ++  GRL+++
Sbjct: 611 VDASTIKMV-IDMLSDGRLKKS 631



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 244/482 (50%), Gaps = 17/482 (3%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           K G  PN  T++ L++G C  G + EA+ +VD M +    PD+ T N L+NG C +G   
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           EA  L  +M      P+ VTY  ++N   +SG++  A +L+ +++E  IK +AV ++I+I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              CK G +D A  +   ME  G + + +TYN LI   C AG  ++  +++  M ++ + 
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N +T + ++ +   E KL EA  L      RG   D ++Y +LI G+ ++   ++A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            D M  +   P+  T+N +I G  ++ + +  +++  ++   G++ D  T+NT+I GFC 
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G++  A +   +MV +   P+IVT  ILL GLC  G  EKAL+ F         +D   
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN +I  +C   +++DA+ L   +  K + P   TY  +   L + G L EA+     M 
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           E G                   P   +Y+  I  H   G    ++++ EE ++ G +++ 
Sbjct: 571 EDGHA-----------------PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613

Query: 518 ST 519
           ST
Sbjct: 614 ST 615



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 236/445 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ +T++T+++ L  +G+++E  +L+  M + G  P+  T N LV+G C  G   EAM +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +    P+  TY  ++N  C +G    A  L ++ME   +  D V Y+ +I+   +
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    AF L +E++  GI  N +T+NI+I  +C  G+ D   K++R+M +   +P+ VT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++ LID+  K G + EA  +   M  +G+  +TIT  +++   C E  LD+A  +++   
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   +  ++  LI GY +  + +  L+L+ +M  R ++  T TYN +I G  + GK  
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++  E++   + P+  T+  ++ G C  G+ EKAL+   K+ +   + DI   NI++
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G+C    ++ A   F S  LKG      TYN +I  LCK+  L +A  L  +MEE    
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575

Query: 428 PDRYTYAAIHTALVESGRLEEAQKF 452
           PD +TY  +  A +  G   ++ K 
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKL 600



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 256/529 (48%), Gaps = 18/529 (3%)

Query: 3   GFGCLPD-NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           GF    D N++Y   L +     K ++  DL  DM     +P    ++ L S   K    
Sbjct: 45  GFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
              + +   M       +++T +++IN +C    L  AF    ++  L   P+ +T++TL
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN     GR  EA +L+D + E G KP+ +T N ++   C  GK  +A  ++  M E G 
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTY  +++  CK+G    A  ++  M  + +K++ +  + I+  LC    LD A+ 
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L N    +G   + ++Y  LI G+    + +   KL  +M +R+I P+  T++ +I    
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + GK  +A ++  E++  G+ PD  T+ ++I GFC E  ++KA Q  + MV K   P+I 
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T NIL++G C+   ++  L+ FR   L+G   D+VTYNTLI   C+  +L  A  L  EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             +K+ P+  TY  +   L ++G  E+A +               +     K+  E+D  
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALE---------------IFEKIEKSKMELDIG 509

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              Y+  I+  C+  +  DA  +F     KG+     TY  ++ GL K+
Sbjct: 510 I--YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 224/462 (48%), Gaps = 17/462 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M  ++ LP V  ++ L +        +    L K+ME   +  ++ T + +IN F    +
Sbjct: 79  MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              AF  + ++ + G +PN +T + +I   C EG++ +A ++V  M E G  PD +T NT
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L++  C +G   EA  ++D M   G + N +T   +L+ +C   +   A  LL    +R 
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             LD V Y  +I G  +    + A  L++EM+ + I  +  TYN +I G   +G+ +   
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L ++++  + P+  TF+ +I  F  EG++ +A + H +M+ +   PD +T   L+ G 
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+E  L+KA +     + KG   +  T+N LI+  CK  R++D   L  +M  + +  D 
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  +     E G+L  A++    MV             + K P    P+ ++Y   ++
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMV-------------SRKVP----PNIVTYKILLD 481

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             C  G  + AL+IFE+  +  + ++   Y  +++G+    K
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 231/460 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG   +  T N ++++     +L     +L D+ K G  P+  T+  L+ G C  G 
Sbjct: 80  MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 139

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+++ D MT     PDV TY  LING C  G    A R  + ME     P VV Y+T
Sbjct: 140 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYST 199

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EA  L  ++   GI PN  T++ +I   C  G   +A ++   M    
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +T+NTL+DA CK G + +A  ++DVM +  LK + +T N+++   C   ++ +  
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV 319

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++  ++G     +SY TLI GY + +  ++A+ L++EM ++ ++P T TYN +I GL
Sbjct: 320 NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   AI + +E++  G IPD  T+  +    C   ++ +A+     +   +  PDI
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              +I++ G+CR G LE A   F     KG   D  TY  +I+ LC++  L +A  L  E
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+E    P+  TY  I    + +     A +    M+  G
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 250/514 (48%), Gaps = 21/514 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V ++ +L ++ +    + V  L   M   G+  N  T NIL++ +C L  L  A  V
Sbjct: 52  PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    P   T+  LI G C  G + EA +L  +M      PDV+TY TLIN   +
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A + +  +++   +P  V ++ +I   CK+ ++ +A  +  +M   G SP+  T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++LI   C  G+ +EA R+   M  + +  + +T NT++  LC E  + +A+ +++   
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     D V+Y +L+ G+    +  + + ++D M  +  +PS  +Y  +I G  +    +
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+ Q G+IPD  T+NT+IHG C  G++  A+   ++MV     PD+VT  IL 
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDS--VTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
             LC+   L +A+   +  +++G  +D     Y+ ++  +C+   LE A  L S++  K 
Sbjct: 412 DYLCKNHRLAEAMVLLK--VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L PD  TY  +   L + G L EA K    M E G                   P++ +Y
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG-----------------CSPNACTY 512

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           +              A+Q+F+E   +G +I+ ST
Sbjct: 513 NLITRGFLRNNETLRAIQLFQEMLSRGFSIDVST 546



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 244/521 (46%), Gaps = 27/521 (5%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           NTI DAL           L + M +    P+   ++ L++   ++      + +   M  
Sbjct: 33  NTIDDAL----------SLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS 82

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
                + +T N+LIN +C+   L  AF +  ++  L   P   T+ TLI      G+  E
Sbjct: 83  FGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGE 142

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +L D++   G +P+ +T+  +I   CK G    A + +R+ME+    P  V Y+T+ID
Sbjct: 143 ALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIID 202

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           + CK   + EA  +   M  KG+  N  T ++++H LC      EA  L  +   R    
Sbjct: 203 SLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP 262

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D++++ TL+    ++    +A  + D M +  + P   TYN+++ G     +  + +++ 
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           + +++ G +P   ++ T+I+G+C    ++KA+    +M ++   PD VT N L+ GLC  
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G L  A+  F   ++ G+  D VTY  L   LCK  RL +A  LL  +E   L PD + Y
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
           + +   +  +G LE A+   S +   G                 + P   +Y+  IN  C
Sbjct: 443 SIVMDGMCRAGELEAARDLFSKLSSKG-----------------LHPDVRTYTIMINGLC 485

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            QG   +A ++F E  + G + N  TY  +  G ++  +++
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETL 526



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 218/448 (48%), Gaps = 1/448 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P   T+ T++  L  +GK+ E   L   M  +G  P+  TY  L++G CK+G    
Sbjct: 118 LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTST 177

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R +  M Q    P V  Y+ +I+  C    L EA  L  +M +  + P+  TY++LI+
Sbjct: 178 AIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 237

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G   EA +L   +    I P+ +T N ++   CKEG + KA  +V  M ++   P
Sbjct: 238 GLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKP 297

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTYN+L+D +C    M +   + D M RKG   + I+  T+++  C  + +D+A  L 
Sbjct: 298 DVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLF 357

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S++G   D V+Y TLI G     +   A+ L+ EM     +P   TY  +   L ++
Sbjct: 358 EEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKN 417

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            +  +A+ +L  +  + + PD   ++ ++ G C  G++E A    +K+  K   PD+ T 
Sbjct: 418 HRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTY 477

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            I+++GLC++G+L +A K F      G + ++ TYN +     +      A  L  EM  
Sbjct: 478 TIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLS 537

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK 451
           +    D  T   +   L + G L+++ K
Sbjct: 538 RGFSIDVSTTTLLVEMLSDDG-LDQSVK 564



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 193/384 (50%), Gaps = 7/384 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P  V Y+TI+D+L K  +L E   L SDM  +G+ PN  TY+ L+ G C LG 
Sbjct: 185 MEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 244

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA+R+   M   K +PD  T+N L++  C  GM+ +A  +   M    L PDVVTYN+
Sbjct: 245 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304

Query: 121 LINRFF---ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           L++      E G+++  F   D +   G  P+ +++  +I  YCK   +DKA  +   M 
Sbjct: 305 LMDGHCLRSEMGKTVNVF---DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMS 361

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  PD VTYNTLI   C  G + +A  +   M   G   + +T   +   LC   +L 
Sbjct: 362 QQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLA 421

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA +LL          D   Y  ++ G  R  +   A  L+ ++  + + P   TY  MI
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 481

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL Q G   +A  +  E+ ++G  P+  T+N I  GF    +  +A+Q   +M+ + F 
Sbjct: 482 NGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFS 541

Query: 358 PDIVTCNILLSGLCREGILEKALK 381
            D+ T  +L+  L  +G L++++K
Sbjct: 542 IDVSTTTLLVEMLSDDG-LDQSVK 564



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 208/405 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD +TY T+++ L K G  +     L  M+++   P    Y+ ++   CK   
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +   M      P+ +TY+ LI+G C  G  +EA RL   M   K++PD +T+NT
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + G  ++A  ++D + +  +KP+ VT+N ++  +C   ++ K   +   M   G
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  ++Y TLI+  CK   M++A  + + M ++GL  +T+T NT++H LC   +L +A 
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +     G   D V+Y  L     ++ +   A+ L   ++   + P    Y+ ++ G+
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 449

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ E A D+ ++L   G+ PD  T+  +I+G C +G + +A +   +M E    P+ 
Sbjct: 450 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNA 509

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            T N++  G  R     +A++ F+  + +G ++D  T   L+  L
Sbjct: 510 CTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 163/312 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD +T+NT++DAL K+G + +   ++  M +  L P+  TYN L+ G+C    + + + 
Sbjct: 261 MPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVN 320

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M +   +P V +Y  LING+C   ++++A  L +EM    L+PD VTYNTLI+   
Sbjct: 321 VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 380

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L  E+  +G  P+ VT+ I+  + CK  ++ +A  +++ +E     PD  
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIH 440

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ ++D  C+AG +E A  +   +  KGL  +  T   +++ LC +  L EA  L    
Sbjct: 441 IYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   +  +Y  +  G+ R+ +  RA++L+ EM  R       T   ++  LS  G  
Sbjct: 501 DENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLD 560

Query: 307 EQAIDMLNELLQ 318
           +    +L E +Q
Sbjct: 561 QSVKQILCEFVQ 572


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/590 (28%), Positives = 269/590 (45%), Gaps = 89/590 (15%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P   T+ +++ A   +G + E   L  +M   G   N      L+ GYC  G 
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ + + +T++   P+  TY++LI G CN+G +E+A  L  +M+   + P V   N+
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  + ++    EA KL DE  + G+  N  T+NIM+ W CK GK+D+AC ++ NM   G
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 499

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V+YN +I  +C+ GNM+ A  +   M  + LK N +T                  
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVT------------------ 541

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                            Y  LI G F+   + +AL L+D+M    I P+ FT+N +I GL
Sbjct: 542 -----------------YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+  +A D L   L+ G IP   T+N+I+ GF  EG ++ AL  + +M E    P++
Sbjct: 585 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 644

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L++G C+   ++ ALK       KG  +D   Y+ LI   CK R +E A  L  E
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 704

Query: 421 MEEKKLGPDRY-----------------------------------TYAAIHTALVESGR 445
           + E  L P+R                                    TY  +   L++ GR
Sbjct: 705 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 764

Query: 446 LEEAQKFTSIMVETGKIN-----HQVVQ--------PNTSKTPEEID-----PSSISYSE 487
           L  A      M+  G +      H +V          N  K  EE+D     PS + Y+ 
Sbjct: 765 LVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNT 824

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            I  +  +G  K+A  + +E   +G+  +  TY  L+NG  K  +S+S+ 
Sbjct: 825 LIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSRP 874



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 260/530 (49%), Gaps = 18/530 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D+ T + ++ A  K+G++ E  +   + K++G+  +   Y+I++   CK       
Sbjct: 255 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 314

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +++ M +   +P   T+  +I      G + EA RL++EM +     ++V   +L+  
Sbjct: 315 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 374

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G    A  L +++ E G+ PN VT++++I+  C  G I+KA ++   M+ NG  P 
Sbjct: 375 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 434

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               N+L+    KA   EEA ++ D     G+  N  T N ++  LC   K+DEA  LL+
Sbjct: 435 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 493

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +   +G   + VSY  +I G+ R    + A  ++ +M  R + P+  TY+ +I G  + G
Sbjct: 494 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 553

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            +E+A+D+ +++L   + P + TFNTII+G C  GQ+ +A       +E+ F P  +T N
Sbjct: 554 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 613

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G  +EG ++ AL  +R     G + + VTY +LI+  CK  R++ A     EM EK
Sbjct: 614 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 673

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  D   Y+A+     +   +E AQ     ++E G                 + P+ I 
Sbjct: 674 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG-----------------LSPNRIV 716

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           Y+  I+        + AL  +++     I  +  TY  L++GL+K  + +
Sbjct: 717 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLV 766



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 246/537 (45%), Gaps = 51/537 (9%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           V  L++  K+     +   +N L++ Y +   ++ A+   + M     +P V   N+L+ 
Sbjct: 174 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 233

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                 M+ E   L  +M    +  D  T + ++    + GR  EA +   E  E G+K 
Sbjct: 234 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 293

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +A  ++I+I+  CK+   +   +++  M+E G+ P   T+ ++I A    GNM EA R+ 
Sbjct: 294 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 353

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M   G  MN +   +++   C +  LD A  L N  ++ G + ++V+Y  LI G    
Sbjct: 354 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413

Query: 269 EKANRALKLWDEMKERQIMPST----------------------------------FTYN 294
               +A +L+ +MK   I PS                                   FTYN
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN 473

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            M+  L + GK ++A  +L+ ++  GM+P+  ++N +I G C +G ++ A    + M+ +
Sbjct: 474 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR 533

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KP++VT +IL+ G  ++G  EKAL  F   +    A    T+NT+I+ LCK  ++ +A
Sbjct: 534 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 593

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
              L    E+   P   TY +I    ++ G ++ A      M E G              
Sbjct: 594 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG-------------- 639

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
              + P+ ++Y+  IN  C   R   AL+  +E R+KG+ ++ + Y  L++G  KRR
Sbjct: 640 ---VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 693


>gi|255593593|ref|XP_002535906.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223521567|gb|EEF26476.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 183

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 115/177 (64%), Positives = 139/177 (78%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F C PDN +YNTILD L KKGKLNE RDLL DMK  GL P+R T+NILVSGYCKLGW
Sbjct: 1   MKDFSCFPDNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGW 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA +V+D+M +N  LPDVWTYNMLI G C  G ++ AFRLR EME+LKLLPDVVTY T
Sbjct: 61  LKEAAQVIDVMARNNILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKLLPDVVTYTT 120

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           LIN  FE   S++ F+LIDE++  G+KPNAVT+N+++KWY KEGK+D A   +R M+
Sbjct: 121 LINGCFEYSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNALNELRKMD 177



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 96/169 (56%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+  ++N ++   CK+GK+++A  ++ +M+ NG  PD  T+N L+   CK G ++EA ++
Sbjct: 8   PDNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGWLKEAAQV 67

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +DVM R  +  +  T N ++  LC + K+D A+ L +         D V+Y TLI G F 
Sbjct: 68  IDVMARNNILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKLLPDVVTYTTLINGCFE 127

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
              + +  +L DEM+ + + P+  TYN ++    + GK + A++ L ++
Sbjct: 128 YSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNALNELRKM 176



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 92/169 (54%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      PD  +YN +++  C  G L EA  L  +M++  L PD  T+N L++ + + G 
Sbjct: 1   MKDFSCFPDNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGW 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA ++ID +  + I P+  T+N++I   CK+GKID A ++   ME     PD VTY T
Sbjct: 61  LKEAAQVIDVMARNNILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKLLPDVVTYTT 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           LI+   +  +  + F ++D M  KG+K N +T N ++     E K+D A
Sbjct: 121 LINGCFEYSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 169



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           MK+    P   +YN ++  L + GK  +A D+L ++  +G+ PD  TFN ++ G+C  G 
Sbjct: 1   MKDFSCFPDNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGW 60

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYN 399
           +++A Q  + M   +  PD+ T N+L+ GLC++G ++ A +  R  +   K + D VTY 
Sbjct: 61  LKEAAQVIDVMARNNILPDVWTYNMLIGGLCKDGKIDGAFR-LRDEMENLKLLPDVVTYT 119

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           TLI+   +       F L+ EME K + P+  TY  +    V+ G+++ A
Sbjct: 120 TLINGCFEYSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 169



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 85/163 (52%)

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           + NTIL  LC + KL+EA  LL      G + D  ++  L++GY +      A ++ D M
Sbjct: 12  SYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGWLKEAAQVIDVM 71

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
               I+P  +TYN +I GL + GK + A  + +E+    ++PD  T+ T+I+G       
Sbjct: 72  ARNNILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKLLPDVVTYTTLINGCFEYSSS 131

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
            K  +  ++M  K  KP+ VT N+++    +EG ++ AL   R
Sbjct: 132 LKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNALNELR 174



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 88/169 (52%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  +YNT++D  CK G + EA  ++  M   GL  +  T N ++   C    L EA  +
Sbjct: 8   PDNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGWLKEAAQV 67

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           ++  ++     D  +Y  LI G  +D K + A +L DEM+  +++P   TY  +I G  +
Sbjct: 68  IDVMARNNILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKLLPDVVTYTTLINGCFE 127

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
              + +  ++++E+   G+ P+  T+N ++  +  EG+++ AL    KM
Sbjct: 128 YSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNALNELRKM 176



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 90/176 (51%)

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  SY T++    +  K N A  L  +MK   + P   T+N ++ G  + G  ++A  
Sbjct: 7   FPDNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGWLKEAAQ 66

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +++ + ++ ++PD  T+N +I G C +G+++ A +  ++M      PD+VT   L++G  
Sbjct: 67  VIDVMARNNILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKLLPDVVTYTTLINGCF 126

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                 K  +       KG   ++VTYN ++    KE ++++A   L +M+  KLG
Sbjct: 127 EYSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNALNELRKMDIVKLG 182



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 17/141 (12%)

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D+ +YNT++  LCK+ +L +A  LL +M+   L PDR T+  + +   + G L+EA +  
Sbjct: 9   DNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGWLKEAAQVI 68

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            +M                     I P   +Y+  I   C  G+   A ++ +E     +
Sbjct: 69  DVMARN-----------------NILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKL 111

Query: 514 AINKSTYMNLMNGLIKRRKSI 534
             +  TY  L+NG  +   S+
Sbjct: 112 LPDVVTYTTLINGCFEYSSSL 132



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 17/182 (9%)

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M + S  PD  + N +L  LC++G L +A          G   D  T+N L+S  CK   
Sbjct: 1   MKDFSCFPDNASYNTILDVLCKKGKLNEARDLLLDMKNNGLFPDRNTFNILVSGYCKLGW 60

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           L++A  ++  M    + PD +TY  +   L + G+++ A +    M              
Sbjct: 61  LKEAAQVIDVMARNNILPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENL----------- 109

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                 ++ P  ++Y+  IN            ++ +E   KG+  N  TY  ++   +K 
Sbjct: 110 ------KLLPDVVTYTTLINGCFEYSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKE 163

Query: 531 RK 532
            K
Sbjct: 164 GK 165



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 54/105 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD  TYN ++  L K GK++    L  +M+   L+P+  TY  L++G  +     +   
Sbjct: 77  LPDVWTYNMLIGGLCKDGKIDGAFRLRDEMENLKLLPDVVTYTTLINGCFEYSSSLKGFE 136

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
           ++D M      P+  TYN+++  +   G ++ A    ++M+ +KL
Sbjct: 137 LIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNALNELRKMDIVKL 181


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 204/368 (55%), Gaps = 2/368 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ VTYNT++     +G++    D++ +M+++G + PN+ TY  ++SG+CK+G + EA++
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 202

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V D ++T+ +  P+   YN LI G+C+ G L+ A   R  M    +   V TYN L++  
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F  GR  EA++L++E+   G+ P+  T+NI+I  +CKEG + KA +I  NM   G     
Sbjct: 263 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 322

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY  LI A  K G ++E  ++ D   R+G++ + +  N ++++      +D A+ ++  
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+    D+V+Y TL+ G     + + A KL DEM ER I P   TYN +I G S  G 
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 442

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ + NE++  G  P   T+N +I G C  GQ + A     +MVE    PD  T   
Sbjct: 443 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 502

Query: 366 LLSGLCRE 373
           L+ GL  E
Sbjct: 503 LIEGLTTE 510



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 223/406 (54%), Gaps = 8/406 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L   GK     +LL  M +    PN  TYN +++G+C  G ++ A+ ++  M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESG 129
            +   + P+ +TY  +I+GWC  G ++EA ++  EM +  ++ P+ V YN LI  + + G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   A    D + E G+     T+N+++     +G+  +A ++V  M   G +PD  TYN
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+ +CK GN+++A  + + M R+G++   +T   +++ L  + ++ E   L + A +R
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V Y  LI  +      +RA ++  EM++++I P   TYN ++ GL   G+ ++A
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +++E+ + G+ PD  T+NT+I G+  +G V+ AL+  N+M+ K F P ++T N L+ G
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC--KERRLED 413
           LC+ G  + A    +  +  G   D  TY +LI  L    ER ++D
Sbjct: 472 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDD 517



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 220/407 (54%), Gaps = 6/407 (1%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L +DM +  L    TT+NI++   C  G    A+ ++  M +    P+  TYN +I G+C
Sbjct: 101 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 156

Query: 92  NAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPN 149
           + G ++ A  + +EM E   + P+  TY T+I+ + + GR  EA K+ DE+   G +KP 
Sbjct: 157 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 216

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           AV +N +I  YC +GK+D A      M E G +    TYN L+ A    G   EA+ +++
Sbjct: 217 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 276

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            MG KGL  +  T N +++  C E  + +A  +  + S+RG     V+Y  LI    +  
Sbjct: 277 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 336

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +     KL+DE   R I P    YNA+I   S SG  ++A +++ E+ +  + PD+ T+N
Sbjct: 337 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 396

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G C  G+V++A +  ++M E+  +PD+VT N L+SG   +G ++ AL+     + K
Sbjct: 397 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 456

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           G     +TYN LI  LCK  + +DA  ++ EM E  + PD  TY ++
Sbjct: 457 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 200/381 (52%), Gaps = 6/381 (1%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C+AG    A  L ++M      P+ VTYNT+I  F   GR   A  ++ E+
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171

Query: 142 DEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDANCKAG 199
            E G I PN  T+  +I  +CK G++D+A K+   M   G   P+ V YN LI   C  G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A    D M  +G+ M   T N ++H L  + +  EAY L+     +G   D  +Y 
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI G+ ++    +AL++++ M  R +  +  TY A+I+ LS+ G+ ++   + +E ++ 
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD   +N +I+   + G +++A +   +M +K   PD VT N L+ GLC  G +++A
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K       +G   D VTYNTLIS    +  ++DA  + +EM  K   P   TY A+   
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L ++G+ ++A+     MVE G
Sbjct: 472 LCKNGQGDDAENMVKEMVENG 492



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 215/456 (47%), Gaps = 32/456 (7%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           SLP     N+L+           + RL   M+SL L     + + L++       S  AF
Sbjct: 49  SLP-----NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAF 99

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L  ++    +     T NIM++  C  GK  +A +++R M      P+ VTYNT+I   
Sbjct: 100 ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGF 155

Query: 196 CKAGNMEEAFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           C  G ++ A  +M  M  R G+  N  T  T++   C   ++DEA  + +    +G    
Sbjct: 156 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 215

Query: 255 E-VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           E V Y  LI GY    K + AL   D M ER +  +  TYN ++  L   G+  +A +++
Sbjct: 216 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 275

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E+   G+ PD  T+N +I+G C EG V+KAL+    M  +  +  +VT   L+  L ++
Sbjct: 276 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 335

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G +++  K F   + +G   D V YN LI+S      ++ AF ++ EME+K++ PD  TY
Sbjct: 336 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 395

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +   L   GR++EA+K    M E G                 I P  ++Y+  I+ + 
Sbjct: 396 NTLMRGLCLLGRVDEARKLIDEMTERG-----------------IQPDLVTYNTLISGYS 438

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +G  KDAL+I  E   KG      TY  L+ GL K
Sbjct: 439 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 474



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 138/275 (50%), Gaps = 37/275 (13%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            TYN ++ ALF  G+  E  +L+ +M  +GL P+  TYNIL++G+CK G +K+A+ + + 
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 312

Query: 71  MTQNKSL-----------------------------------PDVWTYNMLINGWCNAGM 95
           M++                                       PD+  YN LIN    +G 
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           ++ AF +  EME  ++ PD VTYNTL+      GR  EA KLIDE+ E GI+P+ VT+N 
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y  +G +  A +I   M   GF+P  +TYN LI   CK G  ++A  M+  M   G
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 216 LKMNTITLNTILHTLCC--EKKLDEAYMLLNSASK 248
           +  +  T  +++  L    E+ +D+  +    A+K
Sbjct: 493 ITPDDSTYISLIEGLTTEDERAIDDERLAAADAAK 527



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 23/259 (8%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L+ +M   ++   T T+N M+  L  +GK  +A+++L ++ +    P+  T+NT+I 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 334 GFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           GFCS G+V+ AL    +M E+    P+  T   ++SG C+ G +++A+K F   + KG+ 
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 393 -VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++V YN LI   C + +L+ A      M E+ +     TY  +  AL   GR  EA +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G                 + P   +Y+  IN HC +G  K AL+IFE   ++
Sbjct: 274 LVEEMGGKG-----------------LAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316

Query: 512 GIAINKSTYMNLMNGLIKR 530
           G+     TY  L+  L K+
Sbjct: 317 GVRATVVTYTALIYALSKK 335


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 236/460 (51%), Gaps = 1/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T N ++++     +L     +L+ + K G  P+  T+  L+ G C  G 
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ + D M      P+V TY  LING C  G    A RL + ME     PDVV Y +
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  ++   GI P+  T+  +I   C   +      ++  M  + 
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V ++T++DA CK G + EA  ++D+M  +G++ N +T N ++   C + ++DEA 
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++    GY  + +SY TLI GY + ++ ++A  L++EM +++++P+T TYN ++   
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-X 393

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++  G IPD  T+  ++   C +  +++A+     +   +  PDI
Sbjct: 394 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 453

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
               I++ G+CR G LE A   F +   KG   +  TY  +I+ LC+   L++A  L  E
Sbjct: 454 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 513

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+     PD  TY  I   L+++     A +    M+  G
Sbjct: 514 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 553



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 247/518 (47%), Gaps = 25/518 (4%)

Query: 22  KKGKLNEVRDLLSD---MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP 78
           K    N + D LS    M      P+   +N L++   K         + + M      P
Sbjct: 43  KSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPP 102

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           DV+T N+LIN +C+   L  AF +  ++  L   PD  T+ TLI      G+  +A  L 
Sbjct: 103 DVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLF 162

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           D++   G +PN VT+  +I   CK G  + A +++R+ME+    PD V Y ++ID+ CK 
Sbjct: 163 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 222

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKKLDEAYMLLNSASKRGYYLDEV 256
             + EAF +   M  +G+  +  T  +++H+LC  CE K      LLN         D V
Sbjct: 223 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWK--HVTTLLNQMINSKIMPDVV 280

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            + T++    ++ K   A  + D M  R + P+  TYNA++ G     + ++A+ + + +
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           + +G  P+  ++NT+I+G+C   +++KA     +M +K   P+ VT N L+   C  G L
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRL 399

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A+  F   +  G+  D  TY  L+  LCK+  L++A  LL  +E   + PD   Y  +
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              +  +G LE A+   S +   G      ++PN             +Y+  IN  C +G
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKG------LRPNVR-----------TYTIMINGLCRRG 502

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              +A ++F E    G + +  TY  +  GL++ ++++
Sbjct: 503 LLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 540



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 220/455 (48%), Gaps = 36/455 (7%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ +   L   M  +G  PN  TY  L++G CK+G    
Sbjct: 133 LGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNA 192

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM----------------E 107
           A+R++  M Q    PDV  Y  +I+  C    + EAF L  +M                 
Sbjct: 193 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 252

Query: 108 SL-------------------KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           SL                   K++PDVV ++T+++   + G+  EA  ++D +   G++P
Sbjct: 253 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 312

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N VT+N ++  +C + ++D+A K+   M  NG++P+ ++YNTLI+  CK   M++A  + 
Sbjct: 313 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 372

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M +K L  NT+T NT++H  C   +L +A  L +     G   D  +Y  L+    + 
Sbjct: 373 EEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKK 431

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              + A+ L   ++   + P    Y  +I G+ ++G+ E A D+ + L   G+ P+  T+
Sbjct: 432 SHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTY 491

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             +I+G C  G +++A +   +M      PD  T N +  GL +     +A++  +  + 
Sbjct: 492 TIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLA 551

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +G + D  T   L+  LC ++  +    +LSE  +
Sbjct: 552 RGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 173/353 (49%), Gaps = 1/353 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  TY +++ +L    +   V  LL+ M    ++P+   ++ +V   CK G 
Sbjct: 235 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 294

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  VVD+M      P+V TYN L++G C    ++EA ++   M      P+V++YNT
Sbjct: 295 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 354

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + +  R  +A  L +E+ +  + PN VT+N ++   C  G++  A  +   M  +G
Sbjct: 355 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHG 413

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  L+D  CK  +++EA  ++  +    +  +      ++  +C   +L+ A 
Sbjct: 414 QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 473

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++ S +G   +  +Y  +I G  R    + A KL+ EM      P   TYN +  GL
Sbjct: 474 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGL 533

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            Q+ +  +AI +L E+L  G   D +T   ++   C +   +   Q  ++ V+
Sbjct: 534 LQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 161/358 (44%), Gaps = 27/358 (7%)

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           ++  N F    + +NTL DA      +    RM+ +        +T+  N +L ++   K
Sbjct: 34  SLSHNRFHSKSLNFNTLDDA------LSSFNRMLHMHPPP----STVDFNRLLTSIAKTK 83

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +    + L N     G   D  +   LI  +    +   A  +  ++ +    P T T+ 
Sbjct: 84  QYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFT 143

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL   GK   A+ + ++++  G  P+  T+ T+I+G C  G    A++    M + 
Sbjct: 144 TLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQG 203

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           + +PD+V    ++  LC++  + +A   F   + +G + D  TY +LI SLC     +  
Sbjct: 204 NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHV 263

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL++M   K+ PD   ++ +  AL + G++ EA     +M+  G              
Sbjct: 264 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG-------------- 309

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              ++P+ ++Y+  ++ HC Q    +A+++F+     G A N  +Y  L+NG  K ++
Sbjct: 310 ---VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 364


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 225/433 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P +VT+ T+L+ L  K K+ +   L  ++ K G  P+  TY  ++ G CK+G 
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGH 191

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A++++  M +    PDV  YN +I+  C      EA     EM    + P+VVTY++
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ F   G+  EA  L  ++    + PN VT  I++   CKEG I +A ++   M ENG
Sbjct: 252 ILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG 311

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY+ L+D  C    M+EA ++ D+M  KG   +    N +++  C  ++L+EA 
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+    R    D V+Y TL+ G+ +  +   A KL+ EM    ++P + TY+ ++ GL
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A  +L  + +S + P    +N +I G C+ G++E A +  + +  K  +P +
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +++SGL +EG+  +A + FR  ++ G   +S TYN  I    +     +A  L+ E
Sbjct: 492 VTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEE 551

Query: 421 MEEKKLGPDRYTY 433
           M  +    D  T+
Sbjct: 552 MVGRGFSADSSTF 564



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 214/428 (50%)

Query: 33  LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
           L  M K GL P   T+  L++G C    + +A+++ D + +    P + TY  +I G C 
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCK 188

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G    A +L K+ME     PDVV YNT+I+   +  R+ EA     E+ + GI PN VT
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           ++ ++  +C  G++++A  + + M      P+ VT+  L+D  CK G + EA R+ ++M 
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             G++ +  T + ++   C + ++DEA  L +    +G+      Y  LI G+ +  + N
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  L  EM +R + P T TY+ ++ G  Q+G+ + A  +  E+   G++PD  T++ ++
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G C  G +++A +    M E   +P I   NIL+ G+C  G LE A + F +  +KG  
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
              VTY  +IS L KE    +A  +  +M      P+  TY       + +G    A + 
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRL 548

Query: 453 TSIMVETG 460
              MV  G
Sbjct: 549 IEEMVGRG 556



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 233/490 (47%), Gaps = 19/490 (3%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC--NAGMLEEA 99
           +P    +N L+    K       + +   M  +   P+V+T  +LIN  C  N   +  A
Sbjct: 66  LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFA 125

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           F    +M  L L P  VT+ TL+N      + ++A KL DE+ + G  P+ +T+  +IK 
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CK G    A ++++ MEE G  PD V YNT+ID+ CK     EA      M  +G+  N
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T ++ILH  C   +L+EA  L      R    + V++  L+ G  ++     A ++++
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M E  + P  +TY+A++ G     + ++A  + + ++  G  P    +N +I+G C   
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           ++ +A    ++M ++   PD VT + L+ G C+ G  + A K F+     G   DS+TY+
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            L+  LCK   L++AF LL  M+E K+ P    Y  +   +   G+LE A++  S +   
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVK 485

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 I PS ++Y+  I+    +G   +A ++F +    G   N  T
Sbjct: 486 G-----------------IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528

Query: 520 YMNLMNGLIK 529
           Y   + G ++
Sbjct: 529 YNVAIQGFLR 538



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 193/367 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC PD V YNT++D+L K  + NE     S+M  QG+ PN  TY+ ++ G+C LG 
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +   M     +P+  T+ +L++G C  GM+ EA R+ + M    + PD  TY+ 
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +    +  EA KL D +   G  P+   +NI+I  +CK  ++++A  ++  M +  
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY+TL+   C+AG  + A ++   M   GL  ++IT + +L  LC    LDEA+
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +  +         Y  LI G     K   A +L+  +  + I PS  TY  MI GL
Sbjct: 442 RLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGL 501

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G + +A +M  +++ +G +P+  T+N  I GF   G    A++   +MV + F  D 
Sbjct: 502 LKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADS 561

Query: 361 VTCNILL 367
            T  +LL
Sbjct: 562 STFQMLL 568



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 198/398 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +TY TI+  L K G       LL  M+++G  P+   YN ++   CK     EA
Sbjct: 171 GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEA 230

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M     M      P+V TY+ +++G+CN G L EA  L K+M    ++P+ VT+  L++ 
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G  +EA ++ + + E+G++P+A T++ ++  YC + ++D+A K+   M   GF+P 
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN LI+ +CK+  + EA  ++  M  + L  +T+T +T++   C   +   A  L  
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y  L+ G  +    + A +L   M+E +I P    YN +I G+   G
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A ++ + L   G+ P   T+  +I G   EG   +A +   KMV     P+  T N
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYN 530

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           + + G  R G    A++     + +G + DS T+  L+
Sbjct: 531 VAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 236/489 (48%), Gaps = 19/489 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+  T     S Y  L  + +A+   + +   + LP V  +N L+              L
Sbjct: 32  PSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISL 91

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSME--AFKLIDELDEHGIKPNAVTHNIMIKWY 160
            K+M+   + P+V T   LIN    S R     AF  + ++ + G++P  VT   ++   
Sbjct: 92  CKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGL 151

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           C + KI  A K+   + + GF+P  +TY T+I   CK G+   A +++  M  KG K + 
Sbjct: 152 CSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV 211

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +  NT++ +LC +++ +EA    +    +G   + V+Y +++ G+    + N A  L+ +
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ 271

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  R +MP+T T+  ++ GL + G   +A  +   + ++G+ PD  T++ ++ G+C + Q
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           +++A +  + MV K F P +   NIL++G C+   L +A         +    D+VTY+T
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+   C+  R + A  L  EM    L PD  TY+ +   L + G L+EA +    M E+ 
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQES- 450

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                           +I+P    Y+  I   C+ G+ + A ++F     KGI  +  TY
Sbjct: 451 ----------------KIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTY 494

Query: 521 MNLMNGLIK 529
             +++GL+K
Sbjct: 495 TVMISGLLK 503



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 149/350 (42%), Gaps = 50/350 (14%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P  V +N L+ +  K  +      +   M    ++ N  TL  +++ LC   +       
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR------- 119

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                      D V +               A     +M +  + P+  T+  ++ GL  
Sbjct: 120 -----------DHVHF---------------AFSALGKMFKLGLQPTHVTFGTLLNGLCS 153

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             K   A+ + +E+ + G  P   T+ TII G C  G    ALQ   KM EK  KPD+V 
Sbjct: 154 KAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVA 213

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N ++  LC++    +A+ FF   + +G   + VTY++++   C   +L +A  L  +M 
Sbjct: 214 YNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMI 273

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + + P+  T+  +   L + G + EA++   +M E G                 ++P +
Sbjct: 274 GRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG-----------------VEPDA 316

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +YS  ++ +C Q +  +A ++F+    KG A +   Y  L+NG  K R+
Sbjct: 317 YTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 107/281 (38%), Gaps = 54/281 (19%)

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I PS+ T        +       A+   N+LL    +P    FN ++     +      +
Sbjct: 30  ISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89

Query: 346 QFHNKMVEKSFKPDIVTCNI-------------------------------------LLS 368
               +M   + +P++ T  I                                     LL+
Sbjct: 90  SLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLN 149

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC +  +  A+K F      G A   +TY T+I  LCK     +A  LL +MEEK   P
Sbjct: 150 GLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKP 209

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D   Y  +  +L +  R  EA  F S MV+ G                 I P+ ++YS  
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG-----------------IPPNVVTYSSI 252

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  C+ G+  +A  +F++   + +  N  T+  L++GL K
Sbjct: 253 LHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 23/206 (11%)

Query: 334 GFCSE----GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           GFCS       V  A+   N+++     P +V  N LL  L ++      +   +   L 
Sbjct: 39  GFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS 98

Query: 390 GKAVDSVTYNTLISSLCKERR--LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
               +  T   LI+ LC   R  +  AF  L +M +  L P   T+  +   L    ++ 
Sbjct: 99  NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A K   +  E GK+                 PS I+Y+  I   C  G   +ALQ+ ++
Sbjct: 159 DAVK---LFDEIGKMG--------------FAPSLITYTTIIKGLCKIGHTTNALQLLKK 201

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKS 533
             +KG   +   Y  +++ L K R++
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRA 227


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 261/529 (49%), Gaps = 19/529 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D +    ++D LFK G++ E   L  ++ +  LVPN  TY+ L+   CKLG +  A   +
Sbjct: 79  DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESAL 138

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M +   +P+V TY+ LING+   G+L +AF++ ++M     +P++ TY  L++  F++
Sbjct: 139 HEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKA 198

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A  L  ++ + G+K N    +  +    + G++++A ++V  M   G  PD V Y
Sbjct: 199 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 258

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             L+D   K+G +  A  +   M  K +  + +T N +++ L    K D    + ++  +
Sbjct: 259 TNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTES-IYSAMRE 317

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D  +Y T++ G F+      AL+LW+EMK R+++P+  T N MI GL ++G+ E 
Sbjct: 318 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMEN 377

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AID+L E++  G+ P  TT+  +++      + +  LQ H  +V    K D    NIL+S
Sbjct: 378 AIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILIS 437

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LC+ G+  KA    +    +G   D+ TYN LI   C    L+ AF   S M  +++ P
Sbjct: 438 NLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSP 497

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  TY  +   L ++G + EA    S + + G +                 P++ +Y   
Sbjct: 498 DIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV-----------------PNACTYETL 540

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +  HC     K+ L+I+ E   KG  I K    N++ G   +   + +A
Sbjct: 541 MCGHCKVRNTKECLRIYCEMVIKGF-IPKPRAYNMLIGYFSKMGKMKQA 588



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 264/568 (46%), Gaps = 53/568 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD VT+ +IL  L K GKL+E + LL +M K G+  N  +Y IL+    K G 
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+  +  M    +  DV    +LI+G   +G ++EA  L   +  L L+P+ +TY+ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A   + E++E    PN +T++ +I  Y K+G +  A K++R M    
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY  L+D + KAG  + A  +   M + GLK N   L+  ++ +    +++EA 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   +  G   D V+Y  L+ G+ +  K + AL L  EM  + ++    T+N +I  L
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK++    + + + + G+ PD  T+NT+++G   +G    AL+  N+M  +   P+ 
Sbjct: 301 FKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNA 359

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKG------------------------------ 390
           +TCNI+++GLC  G +E A+   +  +L G                              
Sbjct: 360 ITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHEL 419

Query: 391 -----KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                  VD   YN LIS+LCK      A  +L +MEE+ +  D  TY A+      S  
Sbjct: 420 LVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSH 479

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           L+ A    S M+                  E + P   +Y+  +      G   +A  + 
Sbjct: 480 LKRAFMTYSTMLS-----------------ERVSPDIETYNLLLGGLSKAGLIHEADDLL 522

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKS 533
            E +++G+  N  TY  LM G  K R +
Sbjct: 523 SEIKKRGLVPNACTYETLMCGHCKVRNT 550



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 229/460 (49%), Gaps = 1/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C+P+ +TY+++++   K+G L++   +L  M  +  +PN  TY IL+ G  K GW
Sbjct: 141 MEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGW 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ +   M Q     +V+  +  +N    +G +EEA  L  +M S  L PD+V Y  
Sbjct: 201 QDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTN 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +SG+   A  L  E+    +  + VT N++I    K GK D    I   M E G
Sbjct: 261 LMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMG 319

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  TYNT+++ N K GN   A  + + M  + L  N IT N +++ LC   +++ A 
Sbjct: 320 LSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAI 379

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L      G Y    +Y  L+    +  +A+  L+  + +   Q+      YN +I  L
Sbjct: 380 DILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNL 439

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G T +A  +L ++ + G+I D TT+N +IHG+C    +++A   ++ M+ +   PDI
Sbjct: 440 CKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDI 499

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+LL GL + G++ +A         +G   ++ TY TL+   CK R  ++   +  E
Sbjct: 500 ETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCE 559

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  K   P    Y  +     + G++++A++  + M   G
Sbjct: 560 MVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKG 599



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 219/462 (47%), Gaps = 20/462 (4%)

Query: 5   GCLPDNVTYNTILDALF----KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           G L DNV    ILDA      + G++ E  +L++ M   GL P+   Y  L+ G+ K G 
Sbjct: 214 GGLKDNVF---ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGK 270

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +   MT    + D+ T+N+LIN     G   +   +   M  + L PD+ TYNT
Sbjct: 271 VSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNT 329

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N  F+ G    A +L +E+    + PNA+T NIMI   C+ G+++ A  I++ M   G
Sbjct: 330 MLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMG 389

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY  L++ + K+   +   +  +++    LK++    N ++  LC      +A 
Sbjct: 390 LYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKAT 449

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    +RG   D  +Y  LI GY       RA   +  M   ++ P   TYN ++ GL
Sbjct: 450 AVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGL 509

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++G   +A D+L+E+ + G++P+  T+ T++ G C     ++ L+ + +MV K F P  
Sbjct: 510 SKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKP 569

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED------- 413
              N+L+    + G +++A +       KG +    TY+ LI   C   ++ D       
Sbjct: 570 RAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKI 629

Query: 414 -----AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
                A  L  EM ++   P   T A I +     G+  +A+
Sbjct: 630 SYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADAR 671



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 35/337 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT+L+  FKKG      +L ++MK + L+PN  T NI+++G C+ G 
Sbjct: 315 MREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGR 374

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+ ++  M      P   TY +L+N    +   +   +  + + +++L  D   YN 
Sbjct: 375 MENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNI 434

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G + +A  ++ +++E GI  +  T+N +I  YC    + +A      M    
Sbjct: 435 LISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSER 494

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD  TYN L+    KAG + EA  ++  + ++GL  N  T                  
Sbjct: 495 VSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACT------------------ 536

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                            Y TL+ G+ +       L+++ EM  +  +P    YN +I   
Sbjct: 537 -----------------YETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYF 579

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           S+ GK +QA +++NE+   G+ P  TT++ +I G+C+
Sbjct: 580 SKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCN 616


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 262/505 (51%), Gaps = 19/505 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y  +LD L K       R +L  M ++G+      +  ++  Y + G L+ AM+V+
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M +    P++   N  I+    A MLE+A R  + M+ L ++P+VVTYN LI  + + 
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  +A +LI E+   G  P+ V++  ++ + CK  +I +   ++  ME+     D VTY
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTLI   CK  + +EA + +    ++G +++ +  + I+ + C E ++D+A  ++N    
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   D V+Y  +I G+ +  +  +A K+  +M +    P+T +Y A + GL Q G + +
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A +M+    +    P+  T++ ++HGF  EG++  A     +M+ K F P  V  N+LL 
Sbjct: 382 AREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQ 441

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LCR G +++A KF    +  G AV++V + T+I   C++  +E A  LL +M      P
Sbjct: 442 SLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHP 501

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  TY  I  AL + GR+EEA + T  M++ G                 IDP+ ++Y   
Sbjct: 502 DAVTYTTIIDALGKKGRIEEATELTLKMLKKG-----------------IDPTPVTYRTV 544

Query: 489 INEHCSQGRYKDALQIFEE--TRQK 511
           I+ +   GR +D L + ++  TRQ+
Sbjct: 545 IHRYGQIGRVEDLLNLLDKMLTRQE 569



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 228/460 (49%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +  NT +  L     L +    L  M+  G++PN  TYN L+ GYC L  
Sbjct: 144 MQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHR 203

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++AM ++  M      PD  +Y  ++   C    + E   + ++ME  KLL D VTYNT
Sbjct: 204 VEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNT 263

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +   + EA + + E  + G + + V ++ ++  YCKEG++D+A +IV  M   G
Sbjct: 264 LIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRG 323

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY  +I+   +AG + +A +M+  M + G K NT++    L  LC +    EA 
Sbjct: 324 CIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAR 383

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++ ++ ++ +  + ++Y  ++ G+ R+ K + A  +  EM  +   P+    N ++  L
Sbjct: 384 EMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSL 443

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ ++A   + E L  G   +   F T+IH FC +  +E AL   + M   +  PD 
Sbjct: 444 CRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDA 503

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   ++  L ++G +E+A +     + KG     VTY T+I    +  R+ED   LL +
Sbjct: 504 VTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDK 563

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  ++    R  +  +   L   G LE A K    ++ T 
Sbjct: 564 MLTRQ--ECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTA 601



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 238/469 (50%), Gaps = 2/469 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD V+Y T++  L K  ++ EV D++  M+   L+ ++ TYN L+   CK     EA
Sbjct: 218 GCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEA 277

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++ +    +     D   Y+ +++ +C  G +++A  +  EM +   +PDVVTY  +IN 
Sbjct: 278 LQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIING 337

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G   +A K++ ++ +HG KPN V++   +K  C++G   +A ++++  EE  ++P+
Sbjct: 338 FSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPN 397

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY+ ++    + G + +A  ++  M  KG     + +N +L +LC   ++DEA   + 
Sbjct: 398 AITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFME 457

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G  ++ V++ T+I  + + +    AL L D+M      P   TY  +I  L + G
Sbjct: 458 ECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKG 517

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A ++  ++L+ G+ P   T+ T+IH +   G+VE  L   +KM+ +  +      N
Sbjct: 518 RIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR--QECRTAFN 575

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++  LC  G LE A K     +     +D+ T + L+ S  ++     A+ +   M  +
Sbjct: 576 QVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSR 635

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
            L PD      +   L++ G+ EEA       VE G I+   ++ + ++
Sbjct: 636 SLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISSHCLRHSQTE 684



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 204/401 (50%), Gaps = 7/401 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME    L D VTYNT++  L K    +E    L + +K+G   ++  Y+ +V  YCK G 
Sbjct: 249 MEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGR 308

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  +V+ M     +PDV TY  +ING+  AG + +A ++ ++M      P+ V+Y  
Sbjct: 309 MDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTA 368

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +    + G S EA +++   +E    PNA+T+++++  + +EGK+  AC +VR M   G
Sbjct: 369 FLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKG 428

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P  V  N L+ + C+ G ++EA + M+     G  +N +   T++H  C +  ++ A 
Sbjct: 429 FFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAAL 488

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+       + D V+Y T+I    +  +   A +L  +M ++ I P+  TY  +I   
Sbjct: 489 SLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRY 548

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+ E  +++L+++L        T FN +I   C+ G +E A +   K++  + + D 
Sbjct: 549 GQIGRVEDLLNLLDKMLTRQEC--RTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDA 606

Query: 361 VTCNILLSGLCREGILEKALK-----FFRSWILKGKAVDSV 396
            TC++L+    R+GI   A K     F RS I   K  + V
Sbjct: 607 NTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKV 647



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 53/343 (15%)

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           +AG +  A +++ +M + G++ N +  NT +H L     L+                   
Sbjct: 130 RAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLE------------------- 170

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
                           +AL+  + M+   IMP+  TYN +I G     + E A+++++E+
Sbjct: 171 ----------------KALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEM 214

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G  PD+ ++ T++   C   ++ + +    KM +     D VT N L+  LC+    
Sbjct: 215 PLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHA 274

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           ++AL+F R    +G  VD V Y+ ++ S CKE R++ A  +++EM  +   PD  TY AI
Sbjct: 275 DEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAI 334

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                ++G + +A+K    M + G       +PNT           +SY+  +   C +G
Sbjct: 335 INGFSQAGEVGQARKMLQQMYKHG------CKPNT-----------VSYTAFLKGLCQKG 377

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +A ++ + + ++    N  TY  +M+G  +R   +S A D
Sbjct: 378 NSSEAREMMKASEEQWWTPNAITYSVVMHGF-RREGKLSDACD 419



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 19/243 (7%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           Q  P  F    ++   S++GK   A+ +L  + ++G+ P+    NT IH       +EKA
Sbjct: 115 QRTPQDFC--CVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L+F  +M      P++VT N L+ G C    +E A++      LKG + D V+Y T++  
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LCK RR+ +   ++ +ME+ KL  D+ TY  +   L +    +EA +F   + E  K   
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQF---LREAQKRGF 289

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           QV                + YS  ++ +C +GR   A +I  E   +G   +  TY  ++
Sbjct: 290 QV--------------DKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAII 335

Query: 525 NGL 527
           NG 
Sbjct: 336 NGF 338



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 19/178 (10%)

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           ++ D +   ++L  L +  + + A +  R  + +G       +  ++ S  +  +L +A 
Sbjct: 79  YRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAM 138

Query: 416 GLLSEMEEKKLGPDRYTY-AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
            +L+ M++  + P+      AIH  LV +  LE+A +F   M   G              
Sbjct: 139 QVLTMMQKAGIEPNLLVCNTAIHV-LVMANMLEKALRFLERMQLLG-------------- 183

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              I P+ ++Y+  I  +C   R +DA+++  E   KG + +K +Y  +M  L K R+
Sbjct: 184 ---IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRR 238


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 245/448 (54%), Gaps = 6/448 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTYNT++  L  + +++E   L   M+K G  P+  TY  L+ G C  G +  A+++
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196

Query: 68  VDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
              M  + S       P+V TYN++++G C  G  +EA +L +EM++  ++P +++YN+L
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ F  +G+  E+ +L+DE+ + G++P+ VT N++I   CKEGK+ +A K++  M E+G 
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VTYN+LI+  C  G++  A  +   M  KG + + I+ N +++      K++EA  
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L N     G   + ++Y +L+ G F   K + A KL+  MK   I  +++TY   + GL 
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 436

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++    +A+ +  EL  S    +    N +I G C  G++E A +   K+  +  +P++V
Sbjct: 437 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV 496

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T  I++ G CREG ++KA    +     G   D +TYNTL+    +  +LE+   LL  M
Sbjct: 497 TYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM 556

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEA 449
            +K + PD  T + +   L +  + +E 
Sbjct: 557 AQKDVSPDAITCSIVVDMLSKDEKYQEC 584



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 256/516 (49%), Gaps = 24/516 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D  T N +L+ L    +L E     + + ++G  PN  TYN L+ G C    + EA
Sbjct: 99  GLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEA 158

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES------LKLLPDVVTY 118
            R+   M +    PDV TY  LI G C  G +  A +L +EM +      +   P+V+TY
Sbjct: 159 TRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITY 218

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N +++   + GR  EA +L +E+   G+ P+ +++N +I  +C  GK +++ +++  M +
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLD 278

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD VT+N LID  CK G + EA +++ VM   G+  + +T N+++   C    L+ 
Sbjct: 279 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 338

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L  S   +G   D +SY  LI GY +  K   A+KL++EM      P+  TY++++ 
Sbjct: 339 ARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK 398

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G+  +GK + A  + + +   G+  +  T+   + G C    + +A++   ++   +FK 
Sbjct: 399 GIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKL 458

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +I   N L+ GLC+ G LE A + F     +G   + VTY  +I   C+E +++ A  L+
Sbjct: 459 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            +ME     PD  TY  +     ES +LEE  +            H++ Q       +++
Sbjct: 519 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLL----------HRMAQ-------KDV 561

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEE-TRQKGI 513
            P +I+ S  ++      +Y++ L +      QKG+
Sbjct: 562 SPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 234/437 (53%), Gaps = 7/437 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEV----RDLLSDMKKQGL--VPNRTTYNILVSG 54
           M+  GC PD VTY T++  L   G +N      +++L+D+ +  +   PN  TYNI+V G
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            CK+G   EA ++ + M     +P + +YN LI+G+C AG  EE+ RL  EM    L PD
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           +VT+N LI+   + G+ +EA KL+  + E GI P+ VT+N +I+ +C  G ++ A ++  
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           +M   G  PD ++YN LI+   K   +EEA ++ + M   G + N IT +++L  +    
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K+D+A  L +     G   +  +YG  + G  +++    A+KL+ E+K           N
Sbjct: 405 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 464

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL ++GK E A ++  +L   G  P+  T+  +IHGFC EGQV+KA     KM   
Sbjct: 465 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              PDI+T N L+ G      LE+ ++       K  + D++T + ++  L K+ + ++ 
Sbjct: 525 GCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQEC 584

Query: 415 FGLLSEMEEKKLGPDRY 431
             LL     +K G D++
Sbjct: 585 LHLLPRFPIQK-GVDKH 600



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 243/504 (48%), Gaps = 26/504 (5%)

Query: 55  YCKLGWLK--EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
           +CK G +    A+    LM ++   P + ++N L++G        + F L  +M    L 
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
            D  T N L+N      R  E F     +   G  PN VT+N +IK  C E +I +A ++
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR----MMDVMGRKGL--KMNTITLNTI 226
              M++ G +PD VTY TLI   C  GN+  A +    M++ + R  +  K N IT N I
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +  LC   + DEA  L      +G     +SY +LI G+    K   + +L DEM ++ +
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGL 281

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P   T+N +I  L + GK  +A  +L  +++SG++PD  T+N++I GFC  G +  A +
Sbjct: 282 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 341

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
               M  K  +PD+++ N+L++G  +   +E+A+K +   +L GK  + +TY++L+  + 
Sbjct: 342 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 401

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQ 465
              +++DA  L S M+   +  + YTY      L ++  L EA K FT +     K+  +
Sbjct: 402 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 461

Query: 466 --------VVQPNTSKTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEET 508
                   + +    +T  E+         +P+ ++Y+  I+  C +G+   A  + ++ 
Sbjct: 462 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 521

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
              G   +  TY  LM G  +  K
Sbjct: 522 EANGCTPDIITYNTLMRGFYESNK 545


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 251/488 (51%), Gaps = 35/488 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY++I+ AL K   +++  ++L+ M K G++PN  TYN ++ GYC     KEA+  
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGF 288

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  +   PDV TYN L++  C  G   EA ++   M    L PD+ TY TL+  +  
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT 348

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G  +E   L+D +  +GI P+    NI+I  Y K+ K+D+A  +   M ++G +P+ VT
Sbjct: 349 KGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVT 408

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  +I   CK+G++++A    + M  +GL  N I   +++H+LC   K D+A  L+    
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEML 468

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG  L+ + + ++I  + ++ +   + KL+D M    + P+  TY+ +I G   +GK +
Sbjct: 469 DRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMD 528

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L+ +   GM PD  T+NT+I+G+C   +++ AL    +MV     P+I+T NI+L
Sbjct: 529 EATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588

Query: 368 S-----------------------------------GLCREGILEKALKFFRSWILKGKA 392
                                               GLC+  + ++AL+ F++  L    
Sbjct: 589 QGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 648

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +++ T+N +I +L K  R ++A  L + +    L PD  TY+ +   L+E G LEE    
Sbjct: 649 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 708

Query: 453 TSIMVETG 460
              M E G
Sbjct: 709 FLSMEENG 716



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 263/532 (49%), Gaps = 21/532 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY  ++    + G+L+     L ++ K+G      T+  L+ G C      +AM +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +PDV++  +L+ G C+    +EA  L   M   +     PDVV+Y T+IN
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G S +A+    E+ +  I P+ VT++ +I   CK   +DKA +++  M +NG  P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +C+TYN+++   C +   +EA   +  M   G++ + +T N+++  LC   +  EA  + 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S +KRG   D  +Y TL+ GY           L D M    I P    +N +I   ++ 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K ++A+ + +++ Q G+ P+  T+  +I   C  G V+ A+ +  +M+++   P+I+  
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+  LC     +KA +     + +G  ++++ +N++I S CKE R+ ++  L   M  
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + P+  TY+ +      +G+++EA K  S M   G                 + P  +
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG-----------------MKPDCV 547

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +Y+  IN +C   R  DAL +F+E    G++ N  TY  ++ GL   R++ +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 599



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 236/458 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P+  TY  L+ GY   G 
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   PD   +N+LI  +     ++EA  +  +M    L P+VVTY  
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SG   +A    +++ + G+ PN + +  +I   C   K DKA +++  M + G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + +N++I ++CK G + E+ ++ D+M R G+K N IT +T++   C   K+DEA 
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+S    G   D V+Y TLI GY R  + + AL L+ EM    + P+  TYN ++ GL
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 651

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F +    G   D  TY+ +  +L ++  LE+   L   
Sbjct: 652 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 711

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           MEE     +     +I   L++ G +  A  + S++ E
Sbjct: 712 MEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDE 749



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 247/490 (50%), Gaps = 41/490 (8%)

Query: 11  VTYNTILDALFKKGKLNEVRDL-LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           +T+  +L  L    + ++  D+ L  M +   +P+  +  IL+ G C     +EA+ ++ 
Sbjct: 123 ITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLH 182

Query: 70  LMTQNK---SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +M  ++   S PDV +Y  +ING+   G  ++A+    EM   ++ PDVVTY+++I    
Sbjct: 183 MMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALC 242

Query: 127 ESGRSME-AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           + G++M+ A +++  + ++G+ PN +T+N ++  YC   +  +A   ++ M  +G  PD 
Sbjct: 243 K-GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDV 301

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN+L+D  CK G   EA ++ D M ++GL+ +  T  T+L     +  L E + LL+ 
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G + D   +  LI  Y + EK + A+ ++ +M++  + P+  TY A+I  L +SG 
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421

Query: 306 T-------EQAID----------------------------MLNELLQSGMIPDETTFNT 330
                   EQ ID                            ++ E+L  G+  +   FN+
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           IIH  C EG+V ++ +  + MV    KP+++T + L+ G C  G +++A K   S    G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D VTYNTLI+  C+  R++DA  L  EM    + P+  TY  I   L  + R   A+
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 451 KFTSIMVETG 460
           +    + ++G
Sbjct: 602 ELYVGITKSG 611



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 27/389 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P   T+ I+I   C+ G++D     + N+ + GF  + +T+  L+   C      +A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA- 141

Query: 206 RMMDVMGRKGLKM----NTITLNTILHTLCCEKKLDEAYMLLN-SASKR--GYYLDEVSY 258
             MD++ R+  ++    +  +   +L  LC E +  EA  LL+  A  R  G   D VSY
Sbjct: 142 --MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            T+I G+F++  +++A   + EM +R+I P   TY+++I  L +    ++A+++L  +++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G++P+  T+N+I+HG+CS  Q ++A+ F  KM     +PD+VT N L+  LC+ G   +
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A K F S   +G   D  TY TL+     +  L +   LL  M    + PD + +  +  
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           A  +  +++EA    S M + G                 ++P+ ++Y   I   C  G  
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHG-----------------LNPNVVTYGAVIGILCKSGSV 422

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGL 527
            DA+  FE+   +G+  N   Y +L++ L
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 186/432 (43%), Gaps = 70/432 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TY T+L     KG L E+  LL  M + G+ P+   +NIL+  Y K   + EA
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M Q+   P+V TY  +I   C +G +++A    ++M    L P+++ Y +LI+ 
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 125 ---------------------------FFES--------GRSMEAFKLIDELDEHGIKPN 149
                                      FF S        GR +E+ KL D +   G+KPN
Sbjct: 451 LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            +T++ +I  YC  GK+D+A K++ +M   G  PDCVTYNTLI+  C+   M++A  +  
Sbjct: 511 VITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFK 570

Query: 210 VMGRKGLKMNTITLNTI-----------------------------------LHTLCCEK 234
            M   G+  N IT N I                                   LH LC   
Sbjct: 571 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNN 630

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
             DEA  +  +       L+  ++  +I    +  + + A  L+  +    ++P   TY+
Sbjct: 631 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 690

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            M   L + G  E+  D+   + ++G   +    N+I+      G + +A  + + + EK
Sbjct: 691 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEK 750

Query: 355 SFKPDIVTCNIL 366
            F  +  T ++L
Sbjct: 751 HFSLEASTASLL 762



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 35/257 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TY+T++D     GK++E   LLS M   G+ P+  TYN L++GYC++  
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI--------------------------------- 87
           + +A+ +   M  +   P++ TYN+++                                 
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621

Query: 88  --NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
             +G C   + +EA R+ + +    L  +  T+N +I    + GR+ EA  L   L  +G
Sbjct: 622 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 681

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+  T+++M +   ++G +++   +  +MEENG + +    N+++    + G++  A 
Sbjct: 682 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAG 741

Query: 206 RMMDVMGRKGLKMNTIT 222
             + ++  K   +   T
Sbjct: 742 TYLSMIDEKHFSLEAST 758



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 8/195 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN IL  LF   +    ++L   + K G     +TYNI++ G CK   
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 61  LKEAMRVVDLMTQNKSLPDVW----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
             EA+R    M QN  L D+     T+N++I      G  +EA  L   + +  L+PDV 
Sbjct: 632 TDEALR----MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 687

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY+ +     E G   E   L   ++E+G   N+   N +++   + G I +A   +  +
Sbjct: 688 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMI 747

Query: 177 EENGFSPDCVTYNTL 191
           +E  FS +  T + L
Sbjct: 748 DEKHFSLEASTASLL 762


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 243/425 (57%), Gaps = 5/425 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +   GC P+ VTY  ++ A  +  KL E   LL +M+++G  PN  TYN+LV   CKL  
Sbjct: 48  LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 107

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  VV  M +    P+V T+N L++G+C  G +++A +L   M +  + P+VVTY+ 
Sbjct: 108 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 167

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +S + +EA ++++E+   G+ P+A T++ +I   CK  KI++A +++R M  +G
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD V Y+++I A CK+G + EA + +  M ++    + +T NT++  LC   K+ EA 
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287

Query: 241 MLLNSASKRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           ++L+   + G  L D V+Y T+I G  + +    A KL D M +    P   TY  +I G
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+ E+A  +L  + ++G  P+  T+ T+I G C   +V++A +   +M      P+
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 407

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKA---VDSVTYNTLISSLCKERRLEDAFG 416
           +VT N +++GLC  G +++A +  +  +  G+A    D+ TY T++++L     +++A  
Sbjct: 408 LVTYNTMVNGLCVSGRIKEAQQLVQ-RMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQ 466

Query: 417 LLSEM 421
           LL +M
Sbjct: 467 LLEQM 471



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 242/476 (50%), Gaps = 23/476 (4%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           C  G L  A+ +++ M      PD +T+  +I    NAG L+ A      + S+   P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNV 57

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           VTY  LI  F  + +  EA KL++E+ E G  PN VT+N+++   CK   +  A  +V+ 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M E GF+P+ +T+N+L+D  CK GN+++A +++ +M  KG++ N +T + ++  LC  +K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
             EA  +L      G   D  +Y  LI G  + +K   A ++   M      P    Y++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I    +SGK  +A   L E+ +    PD  T+NT+I G C  G++ +A    ++M E  
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 356 -FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              PD+VT + +++GLC+  +L +A K        G   D VTY T+I  LCK  RLE+A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL  M+     P+  TY  + + L ++ +++EA++    M   G              
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG-------------- 403

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR--QKGIAINKSTYMNLMNGLI 528
                P+ ++Y+  +N  C  GR K+A Q+ +  +  +   + + +TY  ++N L+
Sbjct: 404 ---CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 456



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 244/459 (53%), Gaps = 6/459 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  T+  I+ A+   G L+   D L  M   G  PN  TY  L++ + +   
Sbjct: 16  MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKK 72

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EAM++++ M +    P++ TYN+L++  C   M+  A  + K+M      P+V+T+N+
Sbjct: 73  LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + G   +A KL+  +   G++PN VT++ +I   CK  K  +A +++  M+ +G
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  TY+ LI   CKA  +EEA +M+  M   G   + +  ++I+H  C   KL EA 
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER-QIMPSTFTYNAMIWG 299
             L    K+    D V+Y T+I G  +  K   A  + D+M+E   ++P   TY+ +I G
Sbjct: 253 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVING 312

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +S    +A  +L+ + ++G  PD  T+ TII G C  G++E+A      M      P+
Sbjct: 313 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 372

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT   L+SGLC+   +++A +        G   + VTYNT+++ LC   R+++A  L+ 
Sbjct: 373 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 432

Query: 420 EMEEKK--LGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            M++ +    PD  TY  I  AL+ S  ++EA++    M
Sbjct: 433 RMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 208/406 (51%), Gaps = 21/406 (5%)

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G    A +L++E+   G  P+A TH  +I      G +D A   +R+M   G  P+ VT
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVT 59

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LI A  +A  +EEA ++++ M  +G   N +T N ++  LC    +  A  ++    
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G+  + +++ +L+ G+ +    + A KL   M  + + P+  TY+A+I GL +S K  
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A ++L E+  SG+ PD  T++ +IHG C   ++E+A Q   +M      PD+V  + ++
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KL 426
              C+ G L +A K  +    + K+ D VTYNT+I  LCK  ++ +A  +L +M+E   +
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY+ +   L +S  L EAQK    M + G                  +P  ++Y+
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG-----------------CNPDVVTYT 342

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I+  C  GR ++A  + +  ++ G A N  TY  L++GL K RK
Sbjct: 343 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 388


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/538 (29%), Positives = 256/538 (47%), Gaps = 18/538 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +   + Y TI++AL K G        +S + K G V +      L+ G+C+   
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245

Query: 61  LKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L++A++V D+M++  +  P+  +Y++LI+G C  G LEEAF L+ +M      P   TY 
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI    + G   +AF L DE+   G KPN  T+ ++I   C++GKI++A  + R M ++
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P  +TYN LI+  CK G +  AF ++ VM ++  K N  T N ++  LC   K  +A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL      G   D VSY  LI G  R+   N A KL   M    I P   T+ A+I  
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + GK + A   L  +L+ G+  DE T  T+I G C  G+   AL     +V+      
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             + N++L  L +   +++ L         G     VTY TL+  L +   +  +F +L 
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M+     P+ Y Y  I   L + GR+EEA+K  S M ++G                 + 
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG-----------------VS 648

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           P+ ++Y+  +  + + G+   AL+      ++G  +N   Y +L+ G +  +K I  +
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 223/456 (48%), Gaps = 17/456 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TY  ++D L + GK+ E   +   M K  + P+  TYN L++GYCK G +  A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ +M +    P+V T+N L+ G C  G   +A  L K M    L PD+V+YN LI+ 
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    A+KL+  ++   I+P+ +T   +I  +CK+GK D A   +  M   G S D
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT  TLID  CK G   +A  +++ + +  +     +LN IL  L    K+ E   +L 
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             +K G     V+Y TL+ G  R      + ++ + MK    +P+ + Y  +I GL Q G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A  +L+ +  SG+ P+  T+  ++ G+ + G++++AL+    MVE+ ++ +    +
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL G                ++L  K +D+   +T+     +E   E    L+S +E+ 
Sbjct: 691 SLLQG----------------FVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL 734

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             G        + T L + GR +E+      ++E G
Sbjct: 735 G-GCISGLCIFLVTRLCKEGRTDESNDLVQNVLERG 769



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 198/426 (46%), Gaps = 29/426 (6%)

Query: 93  AGMLEEAFRLRKEMESLKLLPDVV-----------TYNTLINRFFESGRSMEAFKLIDEL 141
             +++E  R  KEM  L    D +            Y++L+    +      A+     +
Sbjct: 127 VALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRM 186

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           +  G     + +  ++   CK G  + A   +  + + GF  D     +L+   C+  N+
Sbjct: 187 EADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNL 246

Query: 202 EEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
            +A ++ DVM ++     N+++ + ++H LC   +L+EA+ L +   ++G      +Y  
Sbjct: 247 RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTV 306

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI         ++A  L+DEM  R   P+  TY  +I GL + GK E+A  +  ++++  
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P   T+N +I+G+C +G+V  A +    M +++ KP++ T N L+ GLCR G   KA+
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
              +  +  G + D V+YN LI  LC+E  +  A+ LLS M    + PD  T+ AI  A 
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G+ + A  F  +M+  G                 I    ++ +  I+  C  G+ +D
Sbjct: 487 CKQGKADVASAFLGLMLRKG-----------------ISLDEVTGTTLIDGVCKVGKTRD 529

Query: 501 ALQIFE 506
           AL I E
Sbjct: 530 ALFILE 535



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 203/461 (44%), Gaps = 89/461 (19%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  +TYN +++   K G++    +LL+ M+K+   PN  T+N L+ G C++G   +A+ 
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M  N   PD+ +YN+LI+G C  G +  A++L   M    + PD +T+  +IN F 
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK--------------------- 165
           + G++  A   +  +   GI  + VT   +I   CK GK                     
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547

Query: 166 --------IDKACKI------VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                   + K CK+      +  + + G  P  VTY TL+D   ++G++  +FR++++M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              G   N      I++ LC   +++EA  LL++    G   + V+Y  ++ GY  + K 
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWG-------------------------------- 299
           +RAL+    M ER    +   Y++++ G                                
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINEL 727

Query: 300 ---------------------LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
                                L + G+T+++ D++  +L+ G+   E   + I+  +CS+
Sbjct: 728 ISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSK 786

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
            +  K ++    +++  F P   +  +++ GL +EG  E+A
Sbjct: 787 KKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 266/536 (49%), Gaps = 23/536 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C P   +YN I++ L + G  N+   +   MK +G+ P+  T+ I +  +C+   
Sbjct: 102 MDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R+++ M       +   Y  +I+G+       EA+ L  +M  L + P + T+N 
Sbjct: 162 PLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNK 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG-------KIDKACKIV 173
           L++   + G   E  KL++++ ++G+ PN  T NI I+  C++G       K+ +A   +
Sbjct: 222 LMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYL 281

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M   G  PD  TYNT+I    K G +++A R++     KG   +  T  +++  +C +
Sbjct: 282 HKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQD 341

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
             +D A  L   A  +G     V Y TLI G  +     +AL+L ++M +  + P  +TY
Sbjct: 342 GDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTY 401

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I GL + G    A ++LN  +  G +PD  TFNT+I G+C   +++ A+   + M  
Sbjct: 402 NLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS 461

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               PD++T N +L+GLC+    E  ++ F+  + KG   + +TYN LI SLCK R++ +
Sbjct: 462 HGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTE 521

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  LL E+  + L PD  ++  + +    +G L+EA +    M +  +I H V   N   
Sbjct: 522 ALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMI 581

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     ++SEK++   +Q       ++F E   KG   +  TY  +++G  K
Sbjct: 582 N---------AFSEKLDMDMAQ-------KLFHEMGDKGCDPDSYTYRVMIDGFCK 621



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 239/476 (50%), Gaps = 10/476 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   T+N ++  L KKG L E   LL+ + K G+ PN  T+NI + G C+ G 
Sbjct: 207 MLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGV 266

Query: 61  LK-------EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           L+       EA   +  M      PD +TYN +I G+   G +++A R+ K+ +    +P
Sbjct: 267 LEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVP 326

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D  TY +LI    + G    A  L +E    G+KP+ V +N +IK   ++G + KA +++
Sbjct: 327 DEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLM 386

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
            +M + G SPD  TYN +I+  CK G + +A  +++    KG   +  T NT++   C  
Sbjct: 387 NDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKR 446

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K+D A  +L+S    G   D ++Y +++ G  +  K    ++ +  + E+  +P+  TY
Sbjct: 447 LKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITY 506

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I  L ++ K  +A+D+L E+   G+IPD  +F T+I GFC+ G +++A Q   +M E
Sbjct: 507 NILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM-E 565

Query: 354 KSFK--PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           + ++    + T NI+++    +  ++ A K F     KG   DS TY  +I   CK   +
Sbjct: 566 QQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNV 625

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
              +  L +  E    P   T+  +   L    R+ EA     +MV TG +   VV
Sbjct: 626 NSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 256/527 (48%), Gaps = 29/527 (5%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG---YCKLGWLKEAMRV 67
           +TY  +++ L   G+ + +  +L +M+    V N     + VS    Y + G ++EA+ V
Sbjct: 41  LTYKRMIEKLGFHGEFDAMERVLMEMRLN--VDNSLLEGVYVSAMRNYGRKGKVQEAVDV 98

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      P +++YN ++N     G   +A ++   M+   + PDV T+   I  F  
Sbjct: 99  FERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCR 158

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R + A +L++ +   G + NAV +  +I  + +E    +A ++   M   G  P   T
Sbjct: 159 TKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIAT 218

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------CEKKLDEAY 240
           +N L+   CK G+++E  ++++ + + G+  N  T N  +  LC          K+ EA 
Sbjct: 219 FNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAE 278

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+    +G   D+ +Y T+I GY +  K   A ++  + K +  +P  FTY ++I G+
Sbjct: 279 NYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGV 338

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  + A+ +  E L  G+ P    +NT+I G   +G V KALQ  N M ++   PDI
Sbjct: 339 CQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDI 398

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N++++GLC+ G +  A     + I KG   D  T+NTLI   CK  ++++A G+L  
Sbjct: 399 WTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDS 458

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    + PD  TY +I   L ++ + E+  +   +++E G +                 P
Sbjct: 459 MWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCL-----------------P 501

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           + I+Y+  I   C   +  +AL + EE R +G+  +  ++  +++G 
Sbjct: 502 NIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGF 548



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 240/532 (45%), Gaps = 36/532 (6%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE--AMRVV----DLMTQN 74
           ++K  L  +    S  K+ G      TY  ++    KLG+  E  AM  V     L   N
Sbjct: 16  YQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIE---KLGFHGEFDAMERVLMEMRLNVDN 72

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
             L  V+   M    +   G ++EA  + + M+     P + +YN ++N   E G   +A
Sbjct: 73  SLLEGVYVSAM--RNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQA 130

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            K+   +   GI P+  T  I IK +C+  +   A +++ NM   G   + V Y T+I  
Sbjct: 131 HKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISG 190

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
             +     EA+ + + M R G+  +  T N ++H LC +  L E   LLN   K G   +
Sbjct: 191 FYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPN 250

Query: 255 EVSYGTLITGYFR-------DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             ++   I G  R       + K   A     +M  + + P  FTYN +I+G S+ GK +
Sbjct: 251 LFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQ 310

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L +    G +PDE T+ ++I G C +G ++ AL    + + K  KP IV  N L+
Sbjct: 311 DASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLI 370

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL ++G++ KAL+       +G + D  TYN +I+ LCK   + DA  LL+    K   
Sbjct: 371 KGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYL 430

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD +T+  +     +  +++ A      M   G                 + P  I+Y+ 
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG-----------------VTPDVITYNS 473

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            +N  C   + +D ++ F+   +KG   N  TY  L+  L K RK +++A+D
Sbjct: 474 ILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARK-VTEALD 524


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 248/450 (55%), Gaps = 4/450 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G + +  T+N I+ AL K+G+L E   ++    K G+ PN  T+N+++ G  K+G 
Sbjct: 154 MVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGA 213

Query: 61  LKEAMRVV---DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           +  A+++V   ++M+     PD  TYN  +NG+C  G L  A   +KEM   ++ P+V T
Sbjct: 214 MDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRT 273

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y TL++ +   G    AF+L DEL E G+ PN+V +N +I W   EG ++ A  ++ +M 
Sbjct: 274 YATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMI 333

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           +    PD  TY+ +I+  C+ G + EAF+ + ++    L  +  + N +++ LC    L 
Sbjct: 334 DKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLA 393

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  LL +   RG   D V++GTLI  + +D K   A++++++M +    P+   YN++I
Sbjct: 394 GAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVI 453

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G ++ G  + AI +++ L + G+  D  T+NT+IHG+C+ G++++A    ++M      
Sbjct: 454 NGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGIL 512

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
              VT N L++ LC+ G + +A +  +  +L+G   D VTY  LI+S  K+   E+   L
Sbjct: 513 ASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
              M  K + PDR TY  +   L++   +E
Sbjct: 573 HDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 250/522 (47%), Gaps = 25/522 (4%)

Query: 15  TILDALFKK----GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            + DAL +     G      ++++ ++  G       +N  +S   KL  +    ++   
Sbjct: 94  AVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKE 153

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M     + +V T+N++I      G L EA  +        + P+VVT+N +I+   + G 
Sbjct: 154 MVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGA 213

Query: 131 SMEAFKLIDELDEHG---IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
              A KL+ +++      +KP++VT+N  +  +CK G +  A +  + M      P+  T
Sbjct: 214 MDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRT 273

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TL+D   + G++E AFR+ D +  KGL  N++  N+I+H L  E  ++ A +LL+   
Sbjct: 274 YATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMI 333

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +  Y D+ +Y  +I G  R+   N A K    + E  ++   F++N +I  L +S    
Sbjct: 334 DKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLA 393

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L  +   G++PD  TF T+I   C +G+VE A+Q + KM++   KP+++  N ++
Sbjct: 394 GAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVI 453

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +G  +EG  + A+    +    G   D VTYNTLI   C   +++ AF L SEM    + 
Sbjct: 454 NGFAKEGSFDPAILLIDTLRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGIL 512

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
               TY  +  +L ++G + +A++   +MV  G I                 P  ++Y+ 
Sbjct: 513 ASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLI-----------------PDYVTYTI 555

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I     +   ++ +++ +    KG+  ++ TY  ++  L++
Sbjct: 556 LITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQ 597



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 234/542 (43%), Gaps = 66/542 (12%)

Query: 18  DALFKKGKLNEVRDLLSDMKKQGLVPNR-------TTYNILVSGYCKLGWLKEAMRVVDL 70
           DALF  G L  V  +        L+ +          ++ LV    ++G  + A  V+  
Sbjct: 59  DALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITK 118

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           +  +     V  +N  ++       +   +++ KEM S   + +V T+N +I    + GR
Sbjct: 119 LQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGR 178

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFS--PDCVT 187
            +EA  +I    + GI PN VT N++I    K G +D A K+VR ME  +G S  PD VT
Sbjct: 179 LVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVT 238

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+ ++  CK GN+  A      M  K ++ N  T                         
Sbjct: 239 YNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRT------------------------- 273

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                     Y TL+ GY R      A +L DE+ E+ ++P++  YN++I  LS  G  E
Sbjct: 274 ----------YATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDME 323

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L++++   + PD+ T++ +I G C  G + +A +F   ++E S   D  + N+++
Sbjct: 324 GASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVI 383

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LCR   L  A +   +  ++G   D VT+ TLI   CK+ ++E+A  +  +M +    
Sbjct: 384 NYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEK 443

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--------SKTPEE-- 477
           P+   Y ++     + G  + A      +   G  +  VV  NT         K  +   
Sbjct: 444 PNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLFD--VVTYNTLIHGYCNCGKIDQAFA 501

Query: 478 ---------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    I  S ++Y+  IN  C  G    A ++ +    +G+  +  TY  L+    
Sbjct: 502 LFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFS 561

Query: 529 KR 530
           K+
Sbjct: 562 KK 563


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/566 (28%), Positives = 270/566 (47%), Gaps = 41/566 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  +YNT++   F +GK+N    + + M +Q L P+  TY  L+ GYC+ G   EA RV
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391

Query: 68  V--------------------DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           +                      M  +   PDV TY+ LING C  GM+ E   +   M+
Sbjct: 392 LYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
              +LP+ V Y TL+  F ++G + EA K   ++   G+  N+V HN ++  + +EG I 
Sbjct: 452 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 511

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A +  + M     S D  ++N +ID+ C+ GN+ EAF + D M R G   +  T  ++L
Sbjct: 512 EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 571

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC    L +A   +    ++   +DE +  TL+ G  +    + AL L ++M  R I+
Sbjct: 572 RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 631

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA-LQ 346
           P T+TY  ++ G  + GK   A+ +L  +L+ G++PD   +  +++G  +EGQV+ A   
Sbjct: 632 PDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 691

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
           F   + ++    D +  N +++G  + G + +  +  R+         S +YN L+    
Sbjct: 692 FQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYI 751

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV--ETG---K 461
           K+ +L     L  +M ++ + PD  TY  +   L E G +E A KF   MV  E+G   K
Sbjct: 752 KKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPK 811

Query: 462 INHQVVQPNTSKTPEEID---------------PSSISYSEKINEHCSQGRYKDALQIFE 506
             H +   N      +ID               PS ++ S  +   C  G+ ++A+ +F 
Sbjct: 812 HTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFS 871

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
              + G+    +T+  LM+GL K  K
Sbjct: 872 SIMRAGMVPTIATFTTLMHGLCKEFK 897



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 266/559 (47%), Gaps = 42/559 (7%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N +L++L  +GKL++   +L  MK   L PN  TYN +++ Y K G  K A+R++
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M +N    D++TYN++I+  C       A+ L K M  + L PD  +YNTLI+ FF  
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID--------------------K 168
           G+   A  + +++    +KP+  T+  +I  YC+ G+ D                    K
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +I++ M  +G  PD +TY+ LI+  CK G + E   ++  M + G+  N +   T++ 
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVF 467

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C      EA        + G   + V +  L+  ++R+     A +    M   +I  
Sbjct: 468 YFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF 527

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
              ++N +I    Q G   +A  + + +++ G  PD  T+ +++ G C  G + +A +F 
Sbjct: 528 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 587

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             ++EK+   D  T N LL G+C+ G L++AL      + +    D+ TY  L+   CK 
Sbjct: 588 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 647

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ-----------------K 451
            ++  A  LL  M EK L PD   Y  +   LV  G+++ A                   
Sbjct: 648 GKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 707

Query: 452 FTSIM---VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           + S+M   ++ G+IN ++ +   +    E+ PSS SY+  ++ +  +G+    L ++ + 
Sbjct: 708 YNSMMNGYLKGGQIN-EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 766

Query: 509 RQKGIAINKSTYMNLMNGL 527
            ++GI  +  TY  L+ GL
Sbjct: 767 VKEGIKPDNVTYRLLIFGL 785



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 249/530 (46%), Gaps = 20/530 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LP+NV Y T++    K G   E      D+ + GLV N   +N L+  + + G 
Sbjct: 450 MQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 509

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +    M++ K   DV ++N +I+ +C  G + EAF +   M      PD+ TY +
Sbjct: 510 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 569

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    + G  ++A + +  L E     +  T N ++   CK G +D+A  +   M    
Sbjct: 570 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 629

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA- 239
             PD  TY  L+D  CK G +  A  ++ +M  KGL  +TI    +L+ L  E ++  A 
Sbjct: 630 ILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 689

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           YM      K G Y D ++Y +++ GY +  + N   +L   M E ++ PS+ +YN ++ G
Sbjct: 690 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 749

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV--EKSFK 357
             + G+  + + +  ++++ G+ PD  T+  +I G C  G +E A++F  KMV  E   +
Sbjct: 750 YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQ 809

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P       L++  CR G ++ A +        G     V  ++++  LCK  ++E+A  +
Sbjct: 810 PKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIV 869

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
            S +    + P   T+  +   L +  ++++A     +M   G                 
Sbjct: 870 FSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG----------------- 912

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +    ++Y+  I   C++    DAL ++EE + KG+  N +TY+ L   +
Sbjct: 913 LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAM 962



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 243/556 (43%), Gaps = 108/556 (19%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +TY+ +++ + K G ++E +++LS M+K G++PN   Y  LV  +CK G  KEA
Sbjct: 419 GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEA 478

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++    + ++  + +   +N L+  +   GM+ EA + ++ M  +K+  DV ++N +I+ 
Sbjct: 479 LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 538

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTH------------------------------- 153
           + + G  +EAF + D +  HG  P+  T+                               
Sbjct: 539 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 598

Query: 154 ----NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
               N ++   CK G +D+A  +   M      PD  TY  L+D  CK G +  A  ++ 
Sbjct: 599 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQ 658

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEA-YMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           +M  KGL  +TI    +L+ L  E ++  A YM      K G Y D ++Y +++ GY + 
Sbjct: 659 MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKG 718

Query: 269 EKAN-----------------------------------RALKLWDEMKERQIMPSTFTY 293
            + N                                   R L L+ +M +  I P   TY
Sbjct: 719 GQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTY 778

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQS---------------------------------- 319
             +I+GL + G  E A+  L +++                                    
Sbjct: 779 RLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDM 838

Query: 320 ---GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G++P E   ++I+ G C  G+VE+A+   + ++     P I T   L+ GLC+E  +
Sbjct: 839 KALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 898

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A    +     G  VD VTYN LI+ LC ++ + DA  L  EM+ K L P+  TY  +
Sbjct: 899 DDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 958

Query: 437 HTALVESGRLEEAQKF 452
             A+  +G +++ +K 
Sbjct: 959 TGAMYATGTMQDGEKL 974



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 213/424 (50%), Gaps = 3/424 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY ++L  L + G L + ++ +  + ++    +  T N L+ G CK G L EA+ +
Sbjct: 562 PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDL 621

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M     LPD +TY +L++G+C  G +  A  L + M    L+PD + Y  L+N    
Sbjct: 622 CEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVN 681

Query: 128 SGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            G+   A  +  E+  + G+  + + +N M+  Y K G+I++  +++RNM EN   P   
Sbjct: 682 EGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSA 741

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +YN L+    K G +     +   M ++G+K + +T   ++  LC    ++ A   L   
Sbjct: 742 SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 801

Query: 247 --SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G       Y  LI    R    + A +L ++MK   ++PS    ++++ GL + G
Sbjct: 802 VLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 861

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+AI + + ++++GM+P   TF T++HG C E +++ A      M     K D+VT N
Sbjct: 862 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 921

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +L++GLC +  +  AL  +     KG   +  TY TL  ++     ++D   LL ++E++
Sbjct: 922 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 981

Query: 425 KLGP 428
            + P
Sbjct: 982 GIVP 985



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 236/523 (45%), Gaps = 74/523 (14%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           ++++ ++L+N +   G + +A      M+       + + N ++N      +S   +  +
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            E  +     +  T NI++   C +GK+ KA  +++ M +N   P+ VTYNT+++   K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKK 277

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G  + A R++D M + G++ +  T N ++  LC  K+   AY+LL    +     DE SY
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE--- 315
            TLI G+F + K N A+ ++++M  + + PS  TY A+I G  ++G+T++A  +L E   
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 316 -----------------LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
                            +L  G+ PD  T++ +I+G C  G + +  +  ++M +    P
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 457

Query: 359 DIVTCNILLSGLCREGILEKALKFF----RSWILKGKAV--------------------- 393
           + V    L+   C+ G  ++ALK+F    RS ++    +                     
Sbjct: 458 NNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFK 517

Query: 394 ----------DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                     D  ++N +I S C+   + +AF +   M      PD  TY ++   L + 
Sbjct: 518 QYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQG 577

Query: 444 GRLEEAQKFTSIMVETG------KINHQVVQPNTSKTPEE------------IDPSSISY 485
           G L +A++F   ++E         +N  +V      T +E            I P + +Y
Sbjct: 578 GHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTY 637

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           +  ++  C +G+   AL + +   +KG+  +   Y  L+NGL+
Sbjct: 638 TILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLV 680



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 165/322 (51%), Gaps = 3/322 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLVPNRTTYNILVSGYCKLGWLKE 63
           G +PD + Y  +L+ L  +G++     +  ++  K+GL  +   YN +++GY K G + E
Sbjct: 664 GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 723

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             R++  M +N+  P   +YN+L++G+   G L     L ++M    + PD VTY  LI 
Sbjct: 724 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 783

Query: 124 RFFESGRSMEAFKLIDE--LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
              E G    A K +++  L+E G++P    +  +I   C+ G ID A ++  +M+  G 
Sbjct: 784 GLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGV 843

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P  V  ++++   CK G +EEA  +   + R G+     T  T++H LC E K+D+A+ 
Sbjct: 844 VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFH 903

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L       G  +D V+Y  LITG    +    AL L++EMK + ++P+  TY  +   + 
Sbjct: 904 LKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 963

Query: 302 QSGKTEQAIDMLNELLQSGMIP 323
            +G  +    +L ++   G++P
Sbjct: 964 ATGTMQDGEKLLKDIEDRGIVP 985



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 156/314 (49%), Gaps = 8/314 (2%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G   D + YN++++   K G++NE+  L+ +M +  + P+  +YNIL+ GY K G L   
Sbjct: 700  GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 759

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
            + +   M +    PD  TY +LI G C  G++E A +  ++M  E   L P    Y  LI
Sbjct: 760  LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALI 819

Query: 123  NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
            N     G    AF+L +++   G+ P+ V  + +++  CK GK+++A  +  ++   G  
Sbjct: 820  NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV 879

Query: 183  PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            P   T+ TL+   CK   +++AF +  +M   GLK++ +T N ++  LC +K + +A  L
Sbjct: 880  PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 939

Query: 243  LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                  +G   +  +Y TL    +         KL  ++++R I+PS     ++ W    
Sbjct: 940  YEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEW---- 995

Query: 303  SGKTEQAIDMLNEL 316
              + E AI  LN +
Sbjct: 996  --RMENAIKRLNTI 1007



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G  P +  Y  +++A  + G ++   +L  DMK  G+VP+    + +V G CK G 
Sbjct: 803 LEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 862

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+ V   + +   +P + T+  L++G C    +++AF L++ MES  L  DVVTYN 
Sbjct: 863 VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNV 922

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI          +A  L +E+   G+ PN  T+  +       G +    K+++++E+ G
Sbjct: 923 LITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 982

Query: 181 FSP 183
             P
Sbjct: 983 IVP 985



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 1/159 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P  V  ++I+  L K GK+ E   + S + + G+VP   T+  L+ G CK   
Sbjct: 838 MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFK 897

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  +  LM       DV TYN+LI G CN   + +A  L +EM+S  LLP++ TY T
Sbjct: 898 IDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYIT 957

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           L    + +G   +  KL+ ++++ GI P +  H   ++W
Sbjct: 958 LTGAMYATGTMQDGEKLLKDIEDRGIVP-SYKHPESLEW 995



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 60/306 (19%), Positives = 118/306 (38%), Gaps = 74/306 (24%)

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS-TFTYNAMIWGLSQSG 304
           A +R   L +++Y +   G         AL++ D + ++  +   T  Y   +  L Q+ 
Sbjct: 66  AMQRWETLSQMAYKS---GKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQ 122

Query: 305 KTEQAIDMLNELLQSGMIP--------------DET---TFNTIIHGFCSEGQVEKALQF 347
              QA+ +L  L  +G                 D T   + + +++ +  EG+V  A   
Sbjct: 123 MPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAA 182

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M E  FK  + +CN +L+ L      E    F +  + +   +D  T N +++SLC 
Sbjct: 183 IFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCT 242

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           + +L  A  +L +M+  +L                                         
Sbjct: 243 QGKLSKAESMLQKMKNCRL----------------------------------------- 261

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                       P++++Y+  +N +  +GR K AL+I ++  + GI  +  TY  +++ L
Sbjct: 262 ------------PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309

Query: 528 IKRRKS 533
            K ++S
Sbjct: 310 CKLKRS 315


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 270/559 (48%), Gaps = 54/559 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN +L +L  +G L+    L   ++ +GL P+R TY+ L+SG+ K   L  A+ +
Sbjct: 157 PNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYL 216

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFF 126
           +D M   +  PD   YN L+ G    G  E+A R+ +++       P++ TYN +++   
Sbjct: 217 LDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLC 276

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   EA  + + +  +  +P+ +T+  MI   C+   +D A ++   M + G  PD V
Sbjct: 277 KLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVV 336

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT-------------------------- 220
            YN+L+   C AG + EA++  D M   G++  T                          
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLE 396

Query: 221 ---------ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                    +T +T++H LC +   +++  +L  A   G  LDE SY ++I+G  +D + 
Sbjct: 397 KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRL 456

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A+KL++++      P++  YNA+I G  Q+ K   AI + +++ ++   P   T+NT+
Sbjct: 457 DDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTL 516

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IHG C   +  +A +F  +M+EK    D+ T   L+ GLCR+  ++ AL  +   + KG 
Sbjct: 517 IHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGL 576

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KLGPDRYTYAAIHTALVESGRLEEAQ 450
             D V +N LI  LC   ++++A  LLSEM+EK    P+  TY  +     E+G  ++A 
Sbjct: 577 QTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAA 636

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                ++E G +                 P  ISY+ +I   CS  R  + +Q+  E   
Sbjct: 637 SLWMAILENGLV-----------------PDIISYNTRIKGLCSCNRTPEGVQLLNEMLA 679

Query: 511 KGIAINKSTYMNLMNGLIK 529
            GI     T+  L+  +IK
Sbjct: 680 SGIIPTAITWNILVRAVIK 698



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 242/485 (49%), Gaps = 39/485 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLG 59
           M  +   PD V YN +L   F+ G+  +   +   + +  G  PN  TYN+++ G CKLG
Sbjct: 220 MPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLG 279

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
             KEA  V + M  N   PD+ TY  +I+G C +  ++ A R+  EM    L+PDVV YN
Sbjct: 280 MFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYN 339

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-E 178
           +L+  F  +GR  EA+K  D +   GI+ N  ++NIM+K     G +DKA  +   +E +
Sbjct: 340 SLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKD 398

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +  SPD VT++T+I   C+ G   ++ ++++     G +++  + ++++  LC + +LD+
Sbjct: 399 DSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDD 458

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L    S   +  +   Y  LI G+ +  K + A++++ +M E    P+T TYN +I 
Sbjct: 459 AVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIH 518

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++ K  +A     E+L+ G + D  T+ ++I G C + +++ AL   N++++K  + 
Sbjct: 519 GLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQT 578

Query: 359 DIVTCNILLSGLCREG------------------------------------ILEKALKF 382
           D+V  NIL+ GLC  G                                      +KA   
Sbjct: 579 DVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASL 638

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           + + +  G   D ++YNT I  LC   R  +   LL+EM    + P   T+  +  A+++
Sbjct: 639 WMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698

Query: 443 SGRLE 447
            G ++
Sbjct: 699 YGPIQ 703



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 252/536 (47%), Gaps = 33/536 (6%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN---- 74
           AL     L   R L S +   G  P   ++N L+  + +     +A      ++      
Sbjct: 97  ALMPDAALAAFRRLPSFL---GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGR 153

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           +  P++ TYN+++   C  G L+ A  L   +    L PD +TY+TL++ F ++ R   A
Sbjct: 154 RIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNA 213

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLID 193
             L+DE+  + ++P+AV +N ++    + G+ +KA ++   +  + G SP+  TYN ++D
Sbjct: 214 LYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLD 273

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK G  +EA  + + M     + + IT  T++H LC    +D A  + +   K G   
Sbjct: 274 GLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP 333

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D V Y +L+ G+    +   A K WD M    I   T +YN M+ GL   G  ++A D L
Sbjct: 334 DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVT-SYNIMLKGLFDGGMVDKATD-L 391

Query: 314 NELLQ--SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
            ELL+    + PD  TF+T+IHG C +G   K+LQ   +      + D  + + ++SGLC
Sbjct: 392 WELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLC 451

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++G L+ A+K +    +     +S  YN LI+  C+  +  DA  + S+M E    P   
Sbjct: 452 KDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTI 511

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG-------------------KINHQVVQPNTS 472
           TY  +   L ++ +  EA +FT  M+E G                   KI+  +   N  
Sbjct: 512 TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWN-Q 570

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK-GIAINKSTYMNLMNGL 527
              + +    + ++  I+  CS G+  +A Q+  E ++K     N  TY  LM+G 
Sbjct: 571 ILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGF 626



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 176/356 (49%), Gaps = 24/356 (6%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEA---FRMMD--VMGRKGLKMNTITLNTILHTLCCEK 234
           G +P   ++N L+DA  +A    +A   F  +     GR+ +  N  T N +L +LC   
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRR-IAPNLQTYNIMLRSLCVRG 173

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            LD A  L +S   RG   D ++Y TL++G+ ++ + + AL L DEM   ++ P    YN
Sbjct: 174 DLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYN 233

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQ-SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           A++ G  ++G+ E+A+ +  +L++  G  P+  T+N ++ G C  G  ++A     +MV 
Sbjct: 234 ALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVA 293

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
            + +PD++T   ++ GLCR   ++ A + +   I  G   D V YN+L+   C   R+ +
Sbjct: 294 NNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGE 353

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A+     M    +  +  +Y  +   L + G +++A     ++                +
Sbjct: 354 AWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELL----------------E 396

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + + P  +++S  I+  C +G    +LQI EE R  G  +++ +Y ++++GL K
Sbjct: 397 KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCK 452


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 239/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D V  + +++   + G+      +L+ + K G  PN  T   L+ G C  G 
Sbjct: 98  MEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQ 157

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A++  D +       +  +Y  LING C  G    A +L + ++   + P+VV YNT
Sbjct: 158 IHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 217

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EAF L  E+   GI P+ VT+N +I  +C  GK+  A  +   M    
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  T+N L+D  CK   ++EA  ++ +M ++G+K +  T N+++   C  K++++A 
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N+ S+RG   +  SY  +I G+ + +K + A+ L+ EM    I+P   TYN++I GL
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK   A+ +++E+   G+  D+ T+N+I+   C   QV+KA+    KM ++  +PDI
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ GLC+ G LE A   F   ++KG  +D   Y  +I   C     +++  LLS+
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           MEE    P+  TY  I  +L +    ++A+K    M+  G
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 234/458 (51%), Gaps = 17/458 (3%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+ Q    P ++ +  ++     +        L ++ME   +  D+V  + LIN F + G
Sbjct: 62  LLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLG 121

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           ++  +F ++ ++ + G +PN +T   +IK  C +G+I +A +    +   GF  + V+Y 
Sbjct: 122 QNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYG 181

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI+  CK G    A +++  +  K ++ N +  NTI+ ++C  K ++EA+ L +    +
Sbjct: 182 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 241

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V+Y  LI+G+    K   A  L+++M    I P+ +T+N ++ G  +  + ++A
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA 301

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            ++L  +++ G+ PD  T+N+++  +C   +V KA    N + ++   P+I + +I++ G
Sbjct: 302 KNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHG 361

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            C+   +++A+  F+         D VTYN+LI  LCK  ++  A  L+ EM ++ +  D
Sbjct: 362 FCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHD 421

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
           + TY +I  AL ++ ++++A    + M + G                 I P   +Y+  +
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEG-----------------IQPDICTYTTLV 464

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  C  GR +DA  +FE+   KG  ++ + Y  ++ G 
Sbjct: 465 DGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGF 502



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 171/317 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYN ++      GK+ +  DL + M  + + PN  T+NILV G+CK   LKEA
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA 301

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+ +M +    PDV+TYN L++ +C    + +A  +   +    + P++ +Y+ +I+ 
Sbjct: 302 KNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHG 361

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +  EA  L  E+  + I P+ VT+N +I   CK GKI  A K+V  M + G   D
Sbjct: 362 FCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHD 421

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+++DA CK   +++A  ++  M  +G++ +  T  T++  LC   +L++A ++  
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +GY LD   Y  +I G+      + +L L  +M+E   +P+  TY  +I  L    
Sbjct: 482 DLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKD 541

Query: 305 KTEQAIDMLNELLQSGM 321
           + ++A  +L E++  G+
Sbjct: 542 ENDKAEKLLREMITRGL 558



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 194/398 (48%), Gaps = 18/398 (4%)

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           L +   KP+      ++    K         + R ME NG + D V  + LI+   + G 
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
              +F ++  + + G + N ITL T++  LC + ++ +A    +     G++L++VSYGT
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI G  +  + + AL+L   +  + + P+   YN +I  + +     +A D+ +E++  G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + PD  T+N +I GFC  G+++ A    NKM+ ++  P++ T NIL+ G C+E  L++A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
                 + +G   D  TYN+L+   C  + +  A  + + + ++ + P+ ++Y+ +    
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            +  +++EA      M                     I P  ++Y+  I+  C  G+   
Sbjct: 363 CKIKKVDEAMNLFKEM-----------------HCNNIIPDVVTYNSLIDGLCKLGKISY 405

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           AL++ +E   +G+  +K TY ++++ L K  + + KA+
Sbjct: 406 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQ-VDKAI 442



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 194/417 (46%), Gaps = 17/417 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P +  +  ++    +S        L  +++ +GI  + V  +I+I  + + G+   +  +
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  + + G+ P+ +T  TLI   C  G + +A +  D +   G  +N ++  T+++ LC 
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +   A  LL     +    + V Y T+I    + +  N A  L+ EM  + I P   T
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YNA+I G    GK + A D+ N+++   + P+  TFN ++ GFC E ++++A      M+
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++  KPD+ T N L+   C    + KA   F +   +G   +  +Y+ +I   CK ++++
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  L  EM    + PD  TY ++   L + G++  A K    M + G            
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG------------ 417

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             P +     I+Y+  ++  C   +   A+ +  + + +GI  +  TY  L++GL K
Sbjct: 418 -VPHD----KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 132/248 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN+++D      ++N+ + + + + ++G+ PN  +Y+I++ G+CK+  + EA
Sbjct: 312 GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +   M  N  +PDV TYN LI+G C  G +  A +L  EM    +  D +TYN++++ 
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++ +  +A  L+ ++ + GI+P+  T+  ++   CK G+++ A  +  ++   G+  D
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  +I   C  G  +E+  ++  M   G   N +T   I+ +L  + + D+A  LL 
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLR 551

Query: 245 SASKRGYY 252
               RG +
Sbjct: 552 EMITRGLF 559



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 17/265 (6%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D K N        + ++   PS F +  ++  L +S      + +  ++  +G+  D   
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            + +I+ F   GQ   +     K+++  ++P+++T   L+ GLC +G + +AL+F    +
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G  ++ V+Y TLI+ LCK  +   A  LL  ++ K + P+   Y  I  ++ +   + 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA    S MV  G                 I P  ++Y+  I+  C  G+ KDA  +F +
Sbjct: 230 EAFDLYSEMVSKG-----------------ISPDVVTYNALISGFCIVGKMKDATDLFNK 272

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
              + I  N  T+  L++G  K R+
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERR 297



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 82/146 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D +TYN+ILDAL K  ++++   LL+ MK +G+ P+  TY  LV G CK G 
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A  V + +     + DV  Y  +I G+C+ G+ +E+  L  +ME    +P+ VTY  
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532

Query: 121 LINRFFESGRSMEAFKLIDELDEHGI 146
           +I   F+   + +A KL+ E+   G+
Sbjct: 533 IICSLFDKDENDKAEKLLREMITRGL 558


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 249/458 (54%), Gaps = 9/458 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ VTY T++  L  + +++E   L   M+K G  PN  TY  L+ G C+ G +  A
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215

Query: 65  MRVVDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           +++   M  + S       P V TY+++I+G C  G  +EA  L +EM++  ++PDV++Y
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           +TLI+ F  +G+  ++  L DE+ + G++P+ VT +++I   CKEGK+ +A K++  M +
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ 335

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+ +TYN+LID  C  G++  A  +   M  KGL+ + I+  T+++  C   K+ E
Sbjct: 336 RGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKE 395

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L N   + G   +  +YGTL+ G F+  K   A KL+  MK   +  ++  Y   + 
Sbjct: 396 AMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLD 455

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++    +A+++ NEL       +   ++ +I G C  G++E A +   K+ ++  +P
Sbjct: 456 GLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP 515

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+VT NI++ G C+ G ++ A   F      G   D + YNTL+   C+  +LE+   LL
Sbjct: 516 DVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLL 575

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            +M +K + P+  +   +   L +    E+ +KF  ++
Sbjct: 576 HKMVQKDVSPNAASCTIVVDMLCKD---EKYKKFVDLL 610



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 252/515 (48%), Gaps = 26/515 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T + + + L    +++E    ++ + ++G +PN  TY  L+ G C    + EA
Sbjct: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPDVVTY 118
            R+   M +    P+  TY  LI G C  G +  A +L KEM        +   P V+TY
Sbjct: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITY 240

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + +I+   + GR  EA +L +E+   G+ P+ ++++ +I  +C  GK D++  +   M +
Sbjct: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVD 300

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD VT++ LID  CK G + EA ++++VM ++G+  N IT N+++   C    L+ 
Sbjct: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L  S   +G   DE+SY TLI GY +  K   A+ L++EM +    P+  TY  ++ 
Sbjct: 361 ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK 420

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL Q GK   A  +   +   G+  +   +   + G C    + +A++  N++   +FK 
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +I   + L+ GLC+ G LE A + F     +G   D VTYN +I   CK  ++++A  L 
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            +MEE    PD   Y  +     E  +LEE  K            H++VQ       +++
Sbjct: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLL----------HKMVQ-------KDV 583

Query: 479 DPSSISYSEKINEHCSQGRYK---DALQIFEETRQ 510
            P++ S +  ++  C   +YK   D L  F   R 
Sbjct: 584 SPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQRH 618



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 240/503 (47%), Gaps = 23/503 (4%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M +   +P  +++N L+ G  K+    +   + + M      PD++T ++L N  CN   
Sbjct: 82  MMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + EA      +     +P+VVTY TLI       R  EA +L   + + G  PNAVT+  
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 156 MIKWYCKEGKIDKACKIVRNMEENG------FSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           +IK  C+ G ++ A K+ + M  +         P  +TY+ +ID  CK G  +EA  + +
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M  +G+  + I+ +T++H  CC  K D++  L +    +G   D V++  LI    ++ 
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K   A KL + M +R I+P+  TYN++I G    G    A ++   +   G+ PDE ++ 
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I+G+C   +V++A+  +N+M++    P++ T   LL GL ++G +  A K F      
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G + +S  Y   +  LCK   L +A  L +E++      +   Y+ +   L ++G+LE A
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETA 501

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            +    + + G                 + P  ++Y+  I+  C  G+  +A  +FE+  
Sbjct: 502 WELFEKLSQEG-----------------LQPDVVTYNIMIHGFCKVGQVDNANILFEKME 544

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
           + G   +   Y  L+ G  +  K
Sbjct: 545 ENGCTPDIIAYNTLLCGFCEGNK 567



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 234/483 (48%), Gaps = 27/483 (5%)

Query: 56  CKLGWLK--EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           CK G +   +A    DLM ++  +P + ++N L+ G        + F L  EM    L P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D+ T + L N      R  EA   +  +   G  PN VT+  +IK  C E +I +A ++ 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR----MMDVMGRKGL--KMNTITLNTIL 227
             M++ G +P+ VTY TLI   C+ GN+  A +    M++   + G+  K   IT + I+
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC   + DEA  L      +G   D +SY TLI G+    K +++  L+DEM ++ + 
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P   T++ +I  L + GK  +A  +L  ++Q G++P+  T+N++I GFC  G +  A + 
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M  K  +PD ++   L++G C+   +++A+  +   +  GK+ +  TY TL+  L +
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQ 424

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQV 466
           + ++ DA  L   M+   +  +   Y      L ++  L EA + F  +     K+N + 
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE- 483

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                            +YS  I+  C  G+ + A ++FE+  Q+G+  +  TY  +++G
Sbjct: 484 -----------------NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 526

Query: 527 LIK 529
             K
Sbjct: 527 FCK 529


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 242/473 (51%), Gaps = 33/473 (6%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD+ +Y  ++    + G++++V   L DM ++G   +  T  +++S + + G++  A  
Sbjct: 225 VPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFW 284

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
                 Q    P++  ++ LING C  G +++AF + +EM      P+V T+  LI+   
Sbjct: 285 YFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLC 344

Query: 127 ESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           + G + +AF+L  +L      KPN  T+  MI  YCKE K+++A  ++  M+E G  P+ 
Sbjct: 345 KKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNT 404

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY  LID +CKAGN   A+ +MD+MG++G   N  T N I+  LC + +  EAY LL  
Sbjct: 405 NTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRR 464

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K G + D+V+Y  LI+ + R     +AL ++  M +  + P   TYN +I    +  K
Sbjct: 465 GLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKK 524

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E++  +  E +  G++P + T+ ++I G+C +G +  A++F +KM +   KPD +T   
Sbjct: 525 VEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGA 584

Query: 366 LLSGLCREGILEKALKFFRSWILKG----------------KAVDSV------------- 396
           L+SGLC E  L++A + + + I  G                K  DS              
Sbjct: 585 LISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKL 644

Query: 397 ---TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
              T NTLI  LC E+++  A     ++ +K L  DR T AA  TA  ES + 
Sbjct: 645 WIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKF 697



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 247/508 (48%), Gaps = 25/508 (4%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GKL E  +++ +M+  GLV      N ++     LG++  A +V D M     +PD  +Y
Sbjct: 172 GKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSY 231

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +++ G+C  G + +  R  K+M       D  T   +I+ F E G    AF    +  +
Sbjct: 232 KLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQ 291

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ PN +  + +I   CK G I +A +++  M   G+ P+  T+  LID  CK G  E+
Sbjct: 292 MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEK 351

Query: 204 AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+ + ++     K N  T   +++  C E+KL+ A MLL    ++G   +  +Y  LI
Sbjct: 352 AFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLI 411

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +     RA +L D M +    P+ FTYNA+I GL + G+  +A  +L   L+SG+ 
Sbjct: 412 DGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLH 471

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D+ T+  +I  FC +   ++AL   ++M +   +PD+ T N+L++  CR+  +E++ K 
Sbjct: 472 ADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKL 531

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   +  G      TY ++I   C++  +  A     +M +    PD  TY A+ + L  
Sbjct: 532 FEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCN 591

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             +L+EA +    M++ G             +P E+   +++Y     E+C QG    A+
Sbjct: 592 ESKLDEACQLYETMIDNG------------LSPCEVTRVTLAY-----EYCKQGDSATAM 634

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I E        + K  ++  +N LI++
Sbjct: 635 IILER-------LEKKLWIRTVNTLIRK 655



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 236/474 (49%), Gaps = 18/474 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           +V  + ++G LKEA+ +V  M  +  +      N +I+     G ++ A ++  EM    
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           ++PD  +Y  ++  +   GR  +  + + ++ E G   +  T  +MI  + ++G +++A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
              +   + G +P+ + +++LI+  CK G++++AF M++ M RKG K N  T   ++  L
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 231 CCEKKLDEAY-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           C +   ++A+ + L       Y  +  +Y  +I GY ++EK NRA  L   MKE+ ++P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           T TY  +I G  ++G   +A ++++ + + G  P+  T+N II G C +G+  +A +   
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           + ++     D VT  IL+S  CR+   ++AL  F      G   D  TYN LI++ C+++
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           ++E++  L  E     L P + TY ++       G +  A KF   M + G         
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG--------- 574

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                     P SI+Y   I+  C++ +  +A Q++E     G++  + T + L
Sbjct: 575 --------CKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTL 620



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 145/283 (51%), Gaps = 9/283 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF   P+  TYN I+D L KKG+  E   LL    K GL  ++ TY IL+S +C+    
Sbjct: 433 EGFT--PNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDN 490

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           K+A+ +   M +    PD+ TYN+LI  +C    +EE+ +L +E   L LLP   TY ++
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +   G    A K   ++ ++G KP+++T+  +I   C E K+D+AC++   M +NG 
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SP  VT  TL    CK G+   A   M ++ R   K+   T+NT++  LC EKK+  A +
Sbjct: 611 SPCEVTRVTLAYEYCKQGDSATA---MIILERLEKKLWIRTVNTLIRKLCSEKKVGVAAL 667

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
             +    +   +D ++     T  +   K      L  ++ ER
Sbjct: 668 FFHKLLDKDLNVDRITLAAFTTACYESNK----FALVSDLSER 706



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 51/276 (18%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +T     M+   S+ GK ++A++M+ E+   G++      N +I    + G V+ A +  
Sbjct: 157 ATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVF 216

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT----------- 397
           ++M++++  PD  +  +++ G CR G +    ++ +  I +G AVD+ T           
Sbjct: 217 DEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEK 276

Query: 398 ------------------------YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
                                   +++LI+ LCK   ++ AF +L EM  K   P+ YT+
Sbjct: 277 GFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTH 336

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
            A+   L + G  E+A +    +V +                +   P+  +Y+  IN +C
Sbjct: 337 TALIDGLCKKGWTEKAFRLFLKLVRS----------------DNYKPNVYTYTCMINGYC 380

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            + +   A  +    +++G+  N +TY  L++G  K
Sbjct: 381 KEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCK 416


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 267/507 (52%), Gaps = 21/507 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y ++L+ L K       R +L  MK++G+      ++ ++  Y + G L++A++V+
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            LM +    P++   N  I+ +  A  LE+A R  + M+ + ++P+VVTYN +I  + + 
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVT 187
            R  EA +L++++   G  P+ V++  ++ + CKE +I +   +++ M +E+G  PD VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI    K  + +EA   +     KG +++ +  + I+H LC E ++ EA  L+N   
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445

Query: 248 KRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +G+   D V+Y  ++ G+ R  + ++A KL   M      P+T +Y A++ G+ ++GK+
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A +M+N   +    P+  T++ I+HG   EG++ +A     +MV K F P  V  N+L
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L  LCR+G   +A KF    + KG A++ V + T+I   C+   L+ A  +L +M     
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D +TY  +   L + GR+ EA +    M+  G                 IDP+ ++Y 
Sbjct: 626 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG-----------------IDPTPVTYR 668

Query: 487 EKINEHCSQGRYKDALQIFEE--TRQK 511
             I+ +C  G+  D + I E+  +RQK
Sbjct: 669 TVIHRYCQMGKVDDLVAILEKMISRQK 695



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 236/470 (50%), Gaps = 4/470 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLG 59
           M   GCLPD V+Y TI+  L K+ ++ EVRDL+  M K+ GLVP++ TYN L+    K  
Sbjct: 338 MHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD 397

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTY 118
              EA+  +    +     D   Y+ +++  C  G + EA  L  EM S     PDVVTY
Sbjct: 398 HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 457

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
             ++N F   G   +A KL+  +  HG KPN V++  ++   C+ GK  +A +++   EE
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE 517

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           + +SP+ +TY+ ++    + G + EA  ++  M  KG     + +N +L +LC + +  E
Sbjct: 518 HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 577

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   +     +G  ++ V++ T+I G+ ++++ + AL + D+M         FTY  ++ 
Sbjct: 578 ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G+  +A +++ ++L  G+ P   T+ T+IH +C  G+V+  +    KM+ +    
Sbjct: 638 TLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR 697

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            I   N ++  LC  G LE+A       +      D+ T   L+    K+     A+ + 
Sbjct: 698 TIY--NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVA 755

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
             M  + L PD      +   LV  G+++EA K    +VE G I+ Q ++
Sbjct: 756 CRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSLK 805



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 230/462 (49%), Gaps = 4/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +  NT +D   +  +L +    L  M+  G+VPN  TYN ++ GYC L  
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           ++EA+ +++ M     LPD  +Y  ++   C    + E   L K+M +   L+PD VTYN
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   +   + EA   + +  E G + + + ++ ++   CKEG++ +A  ++  M   
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447

Query: 180 GF-SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           G   PD VTY  +++  C+ G +++A +++ VM   G K NT++   +L+ +C   K  E
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  ++N + +  +  + ++Y  ++ G  R+ K + A  +  EM  +   P     N ++ 
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G+T +A   + E L  G   +   F T+IHGFC   +++ AL   + M   +   
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 627

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+ T   L+  L ++G + +A +  +  + KG     VTY T+I   C+  +++D   +L
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 687

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            +M  ++    R  Y  +   L   G+LEEA      ++ T 
Sbjct: 688 EKMISRQ--KCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTA 727



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 186/387 (48%), Gaps = 27/387 (6%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P A +  +M+  Y + G++  A K++  M+  G  P+ +  NT ID   +A  +E+A R 
Sbjct: 242 PEAFS-RVMVS-YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 299

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           ++ M   G+  N +T N ++   C   +++EA  LL     +G   D+VSY T I GY  
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT-IMGYLC 358

Query: 268 DEKANRALKLWDEMK----ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
            EK  R +++ D MK    E  ++P   TYN +I  L++    ++A+  L +  + G   
Sbjct: 359 KEK--RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF-KPDIVTCNILLSGLCREGILEKALKF 382
           D+  ++ I+H  C EG++ +A    N+M+ K    PD+VT   +++G CR G ++KA K 
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            +     G   ++V+Y  L++ +C+  +  +A  +++  EE    P+  TY+ I   L  
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G+L EA      MV  G                   P  +  +  +   C  GR  +A 
Sbjct: 537 EGKLSEACDVVREMVLKGFF-----------------PGPVEINLLLQSLCRDGRTHEAR 579

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  EE   KG AIN   +  +++G  +
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQ 606



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 174/361 (48%), Gaps = 20/361 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D + Y ++++   K    + + R++ +M R+G+       + ++ +     +L +A 
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    + G   + +   T I  + R  +  +AL+  + M+   I+P+  TYN MI G 
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPD 359
               + E+AI++L ++   G +PD+ ++ TI+   C E ++ +      KM  E    PD
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+  L +    ++AL F +    KG  +D + Y+ ++ +LCKE R+ +A  L++
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLIN 442

Query: 420 EMEEK-KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           EM  K    PD  TY A+       G +++A+K   +M   G       +PNT       
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH------KPNT------- 489

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
               +SY+  +N  C  G+  +A ++   + +   + N  TY  +M+GL +R   +S+A 
Sbjct: 490 ----VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL-RREGKLSEAC 544

Query: 539 D 539
           D
Sbjct: 545 D 545


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 259/539 (48%), Gaps = 24/539 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN   +AL + G+  E   L  +   Q L+P+  TY IL+ G C  G LK A  + + M
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V T   L+N  C +G LE A R  ++M S   +P   T+  LI+  F + R 
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILIDGLFRAIRV 208

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA    +E+ +H   PN  T+ ++I    K GK+ +A ++++ M      P    Y ++
Sbjct: 209 DEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSV 263

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I  +CKAG+M +A+ +++ M RKG + + +T NT++H  C  +++D AY LL       +
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMK-ERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             D  +Y  LI G  R ++ + A  L   ++ E    P+  +YN +I G S++ +   A 
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAY 383

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  E++ +G  PD  T++T+I G C+ G+  +A  +  +MV K   P +   + ++SGL
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G L+ A   F S +  G   +   YN+LI  LCK  RL DA   + EM E+   PD 
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDG 503

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETG------KINHQVVQPNTSKTPEEI------ 478
            TY  +   L    R +EA       +E G        N  +      +  + +      
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLA 563

Query: 479 ---DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
               P++  Y+  I   C +    +A Q+ E+    GI  + ST   L+  + ++ K++
Sbjct: 564 TGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAV 622



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 222/449 (49%), Gaps = 11/449 (2%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P    Y +++    K G + +   LL DMK++G   +  TYN L+ G+C+L  +  A  
Sbjct: 254 VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYE 313

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK----LLPDVVTYNTLI 122
           +++ M  N  +PD++TY++LI G C A  L EA   R  + +L+      P+VV+YNTLI
Sbjct: 314 LLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA---RDLLGTLRNEDDCTPNVVSYNTLI 370

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F ++ R  +A++L  E+   G  P+ VT++ +I+  C  G+  +A   +  M      
Sbjct: 371 DGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKIL 430

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P    Y+++I   C+AG ++ A  + D M   G + N    N++++ LC   +L +A + 
Sbjct: 431 PKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLR 490

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           +   ++RG   D V+YGTLI G  R  + + A  L+    E+ I  S  + N +I  L  
Sbjct: 491 VKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC 550

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
               EQA  +L  +L +G  P    + T+I   C E  + +A Q    M+    KPD  T
Sbjct: 551 ---LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGST 607

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM- 421
            + L+  +CR+     A+ F    +  G      TY+TL+++L K  +  +A  +L  + 
Sbjct: 608 VDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLI 667

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
                 PD   Y  +  A     ++EEA+
Sbjct: 668 SHTSCFPDELWYVGLIAAYSNQDQVEEAR 696



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 262/553 (47%), Gaps = 32/553 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            E    +P   T+  ++D LF+  +++E      +MK    +PN  TY ++++G  K G 
Sbjct: 183 FEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTA-IPNNWTYTVVINGLVKAGK 241

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA RV+    Q   +P +  Y  +I G C AG + +A+ L ++M+      D +TYNT
Sbjct: 242 VAEAERVL----QEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNT 297

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-EN 179
           LI+          A++L++E+  +   P+  T++I+I   C+  ++ +A  ++  +  E+
Sbjct: 298 LIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNED 357

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P+ V+YNTLID   KA  + +A+++   M   G   + +T +T++  LC   +  EA
Sbjct: 358 DCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEA 417

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           +  L     +        Y ++I+G  R  + + A  ++D M      P+   YN++I+G
Sbjct: 418 HSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYG 477

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+   A   + E+ + G  PD  T+ T+I G C   + ++A   + + +E+  +  
Sbjct: 478 LCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEIS 537

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             +CN++++ L     LE+A +  R  +  G +  +  Y T+I SLCKE  L +A  LL 
Sbjct: 538 ETSCNVVIASL---RCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLE 594

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----------IN------ 463
           +M    + PD  T  A+  A+    +   A  F   MV  G           +N      
Sbjct: 595 DMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAG 654

Query: 464 -----HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                H V++   S T     P  + Y   I  + +Q + ++A  + +E + K    +  
Sbjct: 655 KPSEAHVVLRRLISHT--SCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIV 712

Query: 519 TYMNLMNGLIKRR 531
            Y  L+ GL + R
Sbjct: 713 AYNTLLKGLFRTR 725



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 218/480 (45%), Gaps = 40/480 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAM 65
           +PD  TY+ ++  L +  +L+E RDLL  ++ +    PN  +YN L+ G+ K   + +A 
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAY 383

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++   M      PDV TY+ LI G CNAG   EA    +EM   K+LP V  Y+++I+  
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +G    A  + D +  +G +PN   +N +I   CK G++  A   V+ M E G SPD 
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDG 503

Query: 186 VTYNTLIDANCKAGN--------------------------------MEEAFRMMDVMGR 213
           VTY TLI   C+                                   +E+A R++ V+  
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLA 563

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
            G         T++ +LC E  L EA  LL      G   D  +   L+    R +KA  
Sbjct: 564 TGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVV 623

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTFNTII 332
           A+   +EM      PS  TY+ ++  L ++GK  +A  +L  L+  +   PDE  +  +I
Sbjct: 624 AMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLI 683

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
             + ++ QVE+A     ++  K     IV  N LL GL R   L+   +  R        
Sbjct: 684 AAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFV 743

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV-ESGRLEEAQK 451
           V+  T+N LI   C+  + + A  +LSEM +K L P     AAI   LV E  R E  Q+
Sbjct: 744 VNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPS----AAIIKFLVDELARAEREQE 798



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 193/426 (45%), Gaps = 46/426 (10%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TYN        +G+  EA++L  E     + P+++T+ I+I+  C  GK+  AC +  
Sbjct: 90  VHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN-TITLNTILHTLCCE 233
            M + G  P  +T   L++A CK+GN+E A R  + M         TI ++ +   +   
Sbjct: 150 EMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAI--- 206

Query: 234 KKLDEAYMLLNSASKRGYYLDEV---------SYGTLITGYFRDEKANRALKLWDEMKER 284
            ++DEA           YY +E+         +Y  +I G  +  K   A ++  EM   
Sbjct: 207 -RVDEA----------CYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP-- 253

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
             +P+   Y ++I G  ++G   +A  +L ++ + G   D  T+NT+IHG C   ++++A
Sbjct: 254 --VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRA 311

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLIS 403
            +   +M    F PDI T +IL++GLCR   L +A     +   +     + V+YNTLI 
Sbjct: 312 YELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLID 371

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
              K  R+ DA+ L  EM      PD  TY+ +   L  +GR  EA  +   MV  GK  
Sbjct: 372 GFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMV--GK-- 427

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                        +I P    YS  I+  C  G    A  +F+     G   N + Y +L
Sbjct: 428 -------------KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSL 474

Query: 524 MNGLIK 529
           + GL K
Sbjct: 475 IYGLCK 480



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 176/374 (47%), Gaps = 7/374 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G   LP    Y++++  L + G+L+    +   M   G  PN   YN L+ G CK G 
Sbjct: 424 MVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGR 483

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A   V  MT+    PD  TY  LI G C     +EA  L   + SL+    +    T
Sbjct: 484 LCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY--VRSLE--QGIEISET 539

Query: 121 LINRFFESGRSME-AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
             N    S R +E A +++  +   G  P A  +  +I+  CKE  + +A +++ +M   
Sbjct: 540 SCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGA 599

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  T + L+ A C+      A   ++ M R G K +  T +T+L+ L    K  EA
Sbjct: 600 GIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEA 659

Query: 240 YMLLNS-ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           +++L    S    + DE+ Y  LI  Y   ++   A  +  E+K +  + S   YN ++ 
Sbjct: 660 HVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLK 719

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++   +   ++L E+ ++  + +E TFN +I GFC  GQ ++A++  ++M +K   P
Sbjct: 720 GLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTP 778

Query: 359 DIVTCNILLSGLCR 372
                  L+  L R
Sbjct: 779 SAAIIKFLVDELAR 792



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 139/346 (40%), Gaps = 51/346 (14%)

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           R+  +    T N     L    + +EAY L      +    D ++YG LI G     K  
Sbjct: 83  RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL---------------- 316
            A  L++EM +R + P   T   ++  L +SG  E A+    ++                
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGL 202

Query: 317 ---------------LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
                          ++   IP+  T+  +I+G    G+V +A     +++++   P + 
Sbjct: 203 FRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEA----ERVLQEMPVPTLA 258

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
               ++ G C+ G + KA         KG   D++TYNTLI   C+ + ++ A+ LL EM
Sbjct: 259 NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM 318

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           +     PD +TY  +   L  + RL EA+                    T +  ++  P+
Sbjct: 319 KSNDFVPDIFTYDILIAGLCRAKRLSEARDLL----------------GTLRNEDDCTPN 362

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +SY+  I+      R  DA Q+F E    G   +  TY  L+ GL
Sbjct: 363 VVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 44/265 (16%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK-TEQAIDMLNELLQSGMIPDETTF 328
           ++NRAL L +    RQ++    + + + + +  +G+ +++ + ++  ++++G        
Sbjct: 19  QSNRALTLEERRDVRQLLQIVESSSRLGFSMKWNGQLSQRLVGVILHMVKNG-------- 70

Query: 329 NTIIHGFCSEGQVEKALQFHN-KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
                        E A+ F       + F+  + T N     L R G  E+A + F+   
Sbjct: 71  -------------ESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKW 117

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +    DS+TY  LI  LC   +L+ A  L  EM ++ L P   T   +  AL +SG LE
Sbjct: 118 PQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLE 177

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            A ++   M                       P + +++  I+      R  +A   FEE
Sbjct: 178 LALRYFEKMSSI--------------------PCAATWTILIDGLFRAIRVDEACYYFEE 217

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
            +   I  N  TY  ++NGL+K  K
Sbjct: 218 MKHTAIP-NNWTYTVVINGLVKAGK 241


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 263/525 (50%), Gaps = 21/525 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V +N +L A+ K  K   V  L   M+  G+  +  TY+I ++ +C+   L  A+ 
Sbjct: 80  FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD+ T + L+NG+C++  + +A  L  +M  +   PD  T+ TLI+  F
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  L+D++ + G +P+ VT+  ++   CK G ID A  +++ ME+     D V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNT+ID  CK  +M++A  +   M  KG++ +  T ++++  LC   +  +A  LL+  
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++  LI  + ++ K   A KL+DEM +R I P  FTY+++I G     + 
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     P+  T++T+I GFC   +VE+ ++   +M ++    + VT   L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  +    + A   F+  +  G   + +TYN L+  LCK  +L  A  +   ++   +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD YTY  +   + ++G++E+  +    +   G                 + P+ I+Y+
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG-----------------VSPNVIAYN 542

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             I+  C +G  ++A  + ++ ++ G   N  TY    N LI+ R
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY----NTLIRAR 583



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 237/449 (52%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  T+ T++  LF   K +E   L+  M ++G  P+  TY  +V+G CK G 
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M + K   DV  YN +I+G C    +++A  L  EM++  + PDV TY++
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A +L+ ++ E  I PN VT + +I  + KEGK+ +A K+   M +  
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY++LI+  C    ++EA  M ++M  K    N +T +T++   C  K+++E  
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G+F+    + A  ++ +M    + P+  TYN ++ GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK  +A+ +   L +S M PD  T+N +I G C  G+VE   +    +  K   P++
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  N ++SG CR+G  E+A    +     G   +S TYNTLI +  ++   E +  L+ E
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M       D  T   + T ++  GRL+++
Sbjct: 599 MRSCGFAGDASTIGLV-TNMLHDGRLDKS 626



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 243/460 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT +++L+      ++++   L+  M + G  P+  T+  L+ G      
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M Q    PD+ TY  ++NG C  G ++ A  L K+ME  K+  DVV YNT
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E+D  GI+P+  T++ +I   C  G+   A +++ +M E  
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT++ LIDA  K G + EA ++ D M ++ +  +  T +++++  C   +LDEA 
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + + V+Y TLI G+ + ++    ++L+ EM +R ++ +T TY  +I G 
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+   + A  +  +++  G+ P+  T+N ++ G C  G++ KA+     +   + +PDI
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E   + F +  LKG + + + YNT+IS  C++   E+A  LL +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+E    P+  TY  +  A +  G  E + +    M   G
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 245/519 (47%), Gaps = 17/519 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D  TY+  ++   ++ +L+    +L+ M K G  P+  T + L++GYC    
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +VD M +    PD +T+  LI+G        EA  L  +M      PD+VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   + G    A  L+ ++++  I+ + V +N +I   CK   +D A  +   M+  G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY++LI   C  G   +A R++  M  + +  N +T + ++     E KL EA 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   KR    D  +Y +LI G+   ++ + A  +++ M  +   P+  TY+ +I G 
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + E+ +++  E+ Q G++ +  T+ T+IHGF      + A     +MV     P+I
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T NILL GLC+ G L KA+  F          D  TYN +I  +CK  ++ED + L   
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +  K + P+   Y  + +     G  EEA      M E G +                 P
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-----------------P 571

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           +S +Y+  I      G  + + ++ +E R  G A + ST
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 219/411 (53%), Gaps = 1/411 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY T+++ L K+G ++    LL  M+K  +  +   YN ++ G CK   + +A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M      PDV+TY+ LI+  CN G   +A RL  +M   K+ P+VVT++ LI+ 
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+ +EA KL DE+ +  I P+  T++ +I  +C   ++D+A  +   M      P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY+TLI   CKA  +EE   +   M ++GL  NT+T  T++H     +  D A M+  
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G + + ++Y  L+ G  ++ K  +A+ +++ ++   + P  +TYN MI G+ ++G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E   ++   L   G+ P+   +NT+I GFC +G  E+A     KM E    P+  T N
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            L+    R+G  E + +  +     G A D+ T   L++++  + RL+ +F
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 627



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 255/506 (50%), Gaps = 17/506 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           K+++  DL  DM K    P+   +N L+S   K+   +  + + + M       D++TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           + IN +C    L  A  +  +M  L   PD+VT ++L+N +  S R  +A  L+D++ E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G KP+  T   +I       K  +A  +V  M + G  PD VTY T+++  CK G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M +  ++ + +  NTI+  LC  K +D+A  L      +G   D  +Y +LI+ 
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                + + A +L  +M ER+I P+  T++A+I    + GK  +A  + +E+++  + PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T++++I+GFC   ++++A      M+ K   P++VT + L+ G C+   +E+ ++ FR
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +G   ++VTY TLI    + R  ++A  +  +M    + P+  TY  +   L ++G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L +A            +  + +Q +T      ++P   +Y+  I   C  G+ +D  ++
Sbjct: 483 KLAKAM-----------VVFEYLQRST------MEPDIYTYNIMIEGMCKAGKVEDGWEL 525

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
           F     KG++ N   Y  +++G  ++
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRK 551



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 179/368 (48%), Gaps = 17/368 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D A  +  +M ++   P  V +N L+ A  K    E    + + M   G+  +  T +
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
             ++  C   +L  A  +L    K GY  D V+  +L+ GY   ++ + A+ L D+M E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P TFT+  +I GL    K  +A+ ++++++Q G  PD  T+ T+++G C  G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L    KM +   + D+V  N ++ GLC+   ++ AL  F     KG   D  TY++LIS 
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M E+K+ P+  T++A+  A V+ G+L EA+K    M++      
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 356

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP   +YS  IN  C   R  +A  +FE    K    N  TY  L+
Sbjct: 357 -----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405

Query: 525 NGLIKRRK 532
            G  K ++
Sbjct: 406 KGFCKAKR 413



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 198/411 (48%), Gaps = 17/411 (4%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L NR  +  +  +A  L  ++ +    P+ V  N ++    K  K +    +   M+  G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D  TY+  I+  C+   +  A  ++  M + G + + +TL+++L+  C  K++ +A 
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   + GY  D  ++ TLI G F   KA+ A+ L D+M +R   P   TY  ++ GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  + A+ +L ++ +  +  D   +NTII G C    ++ AL    +M  K  +PD+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T + L+S LC  G    A +     I +    + VT++ LI +  KE +L +A  L  E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ + PD +TY+++        RL+EA+    +M+                  ++  P
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-----------------KDCFP 396

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           + ++YS  I   C   R ++ +++F E  Q+G+  N  TY  L++G  + R
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 137/300 (45%), Gaps = 17/300 (5%)

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K+D+A  L     K   +   V +  L++   +  K    + L ++M+   I    +TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
             I    +  +   A+ +L ++++ G  PD  T +++++G+C   ++  A+   ++MVE 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
            +KPD  T   L+ GL       +A+      + +G   D VTY T+++ LCK   ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL +ME+ K+  D   Y  I   L +   +++A    + M   G              
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-------------- 288

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              I P   +YS  I+  C+ GR+ DA ++  +  ++ I  N  T+  L++  +K  K +
Sbjct: 289 ---IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 239/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ V +N +++   + G +     +L+ + K G  P+  T N  + G+C  G 
Sbjct: 96  MEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   D +       D  +Y  LING C  G    A  L + ++   +  DVV Y+T
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +AF L  E+    I  N VT++ +I  +C  GK+  A  +   M    
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  T+N L+DA CK G ++EA   + +M ++G+K + +T N+++   C   +++ A 
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +LN+ S RG      SY  +I G+ + +  ++A+KL+ EM  +QI P+  TYN++I GL
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+   A+++++ +   G  PD  T+++I+   C    V+KA+    K+ ++  +P++
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNM 455

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  IL+ GLC+ G LE A   F   ++KG  +   TY  +I   C     ++A  LLS+
Sbjct: 456 YTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK 515

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M++    PD  TY  I  +L +    ++A+K    M+  G
Sbjct: 516 MKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 238/458 (51%), Gaps = 18/458 (3%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+ QN + PD+  +  ++     +        L ++ME   + P+ V +N LIN F + G
Sbjct: 61  LLRQNPTPPDM-EFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLG 119

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
               AF ++ ++ + G +P+ +T N  IK +C +G+I +A      +   GF  D V+Y 
Sbjct: 120 LIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYG 179

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI+  CK G    A  ++  +  K ++++ +  +TI+ ++C +K +++A+ L +    R
Sbjct: 180 TLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSR 239

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               + V+Y  LI+G+    K   A+ L+++M    I P  +T+N ++    + G+ ++A
Sbjct: 240 RISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA 299

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            + L  +++ G+ PD  T+N+++ G+C   +V  A    N M  +     + + NI+++G
Sbjct: 300 KNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVING 359

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            C+  ++++A+K F+    K    + +TYN+LI  LCK  R+  A  L+  M ++   PD
Sbjct: 360 FCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPD 419

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY++I  AL ++  +++A    ++++   K+  Q ++PN             +Y+  I
Sbjct: 420 IITYSSILDALCKNHLVDKA---IALLI---KLKDQGIRPNM-----------YTYTILI 462

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  C  GR +DA  IFE+   KG  +  +TY  ++ G 
Sbjct: 463 DGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGF 500



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 17/417 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P  + +  ++    +S        L  +++  GIKPN V  NI+I  +C+ G I  A  +
Sbjct: 68  PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  + + G+ PD +T NT I   C  G + +A    D +   G  ++ ++  T+++ LC 
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +   A  LL     +   LD V Y T+I    +D+  N A  L+ EM  R+I  +  T
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y+A+I G    GK + AI + N++    + PD  TFN ++  FC EG+V++A      M+
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++  KPDIVT N L+ G C    +  A     +   +G      +YN +I+  CK + ++
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  L  EM  K++ P+  TY ++   L +SGR+  A +   +M + G+           
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQ----------- 416

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  P  I+YS  ++  C       A+ +  + + +GI  N  TY  L++GL K
Sbjct: 417 ------QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCK 467



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 192/414 (46%), Gaps = 18/414 (4%)

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +   ++A  L + L      P  +    ++    K         + + ME  G  P+
Sbjct: 45  FHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPN 104

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V +N LI+  C+ G +  AF ++  + + G + +TITLNT +   C + ++ +A    +
Sbjct: 105 FVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHD 164

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G++LD+VSYGTLI G  +  +   AL+L   +  + +      Y+ +I  + +  
Sbjct: 165 KLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK 224

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A D+ +E++   +  +  T++ +I GFC  G+++ A+   NKM  ++  PD+ T N
Sbjct: 225 NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 284

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+   C+EG +++A       + +G   D VTYN+L+   C    +  A  +L+ M  +
Sbjct: 285 ILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +     +Y  +     +   +++A K         +++H+ + PN            I+
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFK------EMHHKQIFPNV-----------IT 387

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Y+  I+  C  GR   AL++ +    +G   +  TY ++++ L K    + KA+
Sbjct: 388 YNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHL-VDKAI 440



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 45/230 (19%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  ++D L K G+L + R++  D+  +G      TY +++ G+C  G   EA
Sbjct: 450 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEA 509

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M  N  +PD  TY ++I    +    ++A +L +EM +  LL   + Y +    
Sbjct: 510 LSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLS 569

Query: 125 FF------------------ESG-----------------------RSMEAFKLID---- 139
           F                   ESG                       + +E   +I     
Sbjct: 570 FMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTC 629

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +  + G   +  T+ +MI+ +C  G  D++  ++  ME NG  PD VTY+
Sbjct: 630 DWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 271/525 (51%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+V+Y +++  L K G+L E  +L + M+ +  VP    YN ++ GY   G  ++A
Sbjct: 13  GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++ + +   +P V ++N ++        ++EA  L + M+     P+  TYN +I+ 
Sbjct: 73  YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDM 131

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA++++DE++   + PN +T NIM+   CK  K+++A KI  +  + G +PD
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           CVTY +LID   K G ++EA+R+ + M   G   N +   +++       + ++ + +  
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG   D     T +   F+  +  +   ++++++    +P   +Y+ +I GL+++G
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +  ++ + + Q G   D   +N ++ GFC  G+V KA +   +M EK  +P + T  
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL +   L++A   F     KG  ++ V Y++LI    K  R+++A+ +L EM +K
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 431

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+ YT+ ++  ALV++  + EA      M E              K P    P++ +
Sbjct: 432 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM-------------KCP----PNTYT 474

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           YS  IN  C   +Y  A   +++ +++G+  N  TY  +++GL K
Sbjct: 475 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 519



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 239/445 (53%), Gaps = 1/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V++N+IL  L KK K++E   L   MKK    PN +TYNI++   C  G ++EA
Sbjct: 83  GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEA 141

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++D M      P++ T N++++  C A  LEEA+++ +        PD VTY +LI+ 
Sbjct: 142 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 201

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  EA++L +++ + G   N V +  +I+ +   G+ +   KI + +   G  PD
Sbjct: 202 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 261

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG +E+   + + +   G   +  + + ++H L    +  E   + +
Sbjct: 262 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 321

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G+ LD  +Y  ++ G+ +  K ++A ++ +EMKE+ + P+  TY A++ GL++  
Sbjct: 322 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 381

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     +M++K   P++ T N
Sbjct: 382 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 441

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        ++ TY+ LI+ LC+ ++   AF    +M+++
Sbjct: 442 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 501

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
            L P+  TY  + + L + G + +A
Sbjct: 502 GLVPNVVTYTTMISGLAKVGNITDA 526



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 221/444 (49%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++ TYN I+D L   G++ E   +L +M+   L PN  T NI+V   CK   L+EA ++
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  +Q    PD  TY  LI+G    G ++EA+RL ++M       + V Y +LI  FF 
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +  K+  EL   G KP+    N  +    K G+++K   I  ++   GF PD  +
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI    KAG   E   +   M ++G  ++    N ++   C   K+ +AY +L    
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++       +YG ++ G  + ++ + A  L++E K + I  +   Y+++I G  + G+ +
Sbjct: 360 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 419

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L E+++ G+ P+  T+N+++       ++ +AL     M E    P+  T +IL+
Sbjct: 420 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 479

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GLCR     KA  F++    +G   + VTY T+IS L K   + DA+ L    +     
Sbjct: 480 NGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 539

Query: 428 PDRYTYAAIHTALVESGRLEEAQK 451
           PD  ++ A+   +  + R  EA +
Sbjct: 540 PDAASFNALIEGMSNANRAMEAYQ 563



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 225/466 (48%), Gaps = 53/466 (11%)

Query: 99  AFRLRKEMESLKLLPDVVT-----------------------------------YNTLIN 123
           A++   E+++  L PD V+                                   YNT+I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +  +GR  +A+KL++ L E G  P+ V+ N ++    K+ K+D+A  +   M+++   P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN +ID  C  G +EEA+R++D M    L  N +T+N ++  LC  +KL+EAY + 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            SAS+RG   D V+Y +LI G  +  + + A +L+++M +     +   Y ++I      
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E    +  EL++ G  PD T  NT +      G+VEK       +    F PD+ + 
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +IL+ GL + G   +    F +   +G A+D+  YN ++   CK  ++  A+ +L EM+E
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           K + P   TY AI   L +  RL+EA              + + +   SK    I+ + +
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEA--------------YMLFEEAKSKG---IELNVV 403

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            YS  I+     GR  +A  I EE  +KG+  N  T+ +L++ L+K
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 449



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 72/132 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  T+N++LDAL K  ++NE       MK+    PN  TY+IL++G C++    +A
Sbjct: 432 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 491

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
                 M +   +P+V TY  +I+G    G + +A+ L +  ++   +PD  ++N LI  
Sbjct: 492 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551

Query: 125 FFESGRSMEAFK 136
              + R+MEA++
Sbjct: 552 MSNANRAMEAYQ 563



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 56/101 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C P+  TY+ +++ L +  K N+      DM+KQGLVPN  TY  ++SG  K+G 
Sbjct: 463 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 522

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           + +A  + +    N  +PD  ++N LI G  NA    EA++
Sbjct: 523 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 266/586 (45%), Gaps = 64/586 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+N +L+AL ++GK      LL  M++ G+ P   TYN L++ YCK G  K A
Sbjct: 170 GICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAA 229

Query: 65  MRVVDLMT-----------------------------------QNKSLPDVWTYNMLING 89
            +++D M                                    +N   P+  TYN LI+G
Sbjct: 230 SQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISG 289

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +   G +E A ++  EM    LLP+ +TYNTLI     +G   EA +L+D +  HG++PN
Sbjct: 290 FVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPN 349

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+  ++    K  +      I+  M   G     ++Y  +ID  CK G +EEA +++D
Sbjct: 350 EVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLD 409

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M +  +  + +T + +++      K++ A  ++    K G   + + Y TLI  Y +  
Sbjct: 410 DMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMG 469

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               AL  +  M     +   FT N ++    + GK E+A   +N + + G+ P+  TF+
Sbjct: 470 YLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFD 529

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            II+G+ + G   KA    +KM      P + T   LL GLC  G + +ALKFF      
Sbjct: 530 CIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCI 589

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
             AVD+V +NT ++S C+   L DA  L++EM      PD +TY  +   L + G++  A
Sbjct: 590 PNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA 649

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEID------------------------PSSISY 485
              +   +E G     ++ PN +     +D                        P ++++
Sbjct: 650 LLLSGKAIEKG-----LLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAF 704

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +  I+++  +G+      I    + K +  N +TY  L++G  KR 
Sbjct: 705 NVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRH 750



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 259/536 (48%), Gaps = 18/536 (3%)

Query: 1   MEGF-GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           + GF G  P   T N +L +L K+ K++        M  +G+ P+  T+NIL++  C+ G
Sbjct: 130 LMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERG 189

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
             K A  ++  M ++   P   TYN L+N +C  G  + A +L   M S  +  DV TYN
Sbjct: 190 KFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYN 249

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
             I+      RS + + L+  +  + + PN +T+N +I  + +EGKI+ A K+   M   
Sbjct: 250 VFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLF 309

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+ +TYNTLI  +C  GN+ EA R+MDVM   GL+ N +T   +L+ L    +    
Sbjct: 310 NLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMV 369

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L      G  +  +SY  +I G  ++     A++L D+M +  + P   T++ +I G
Sbjct: 370 SSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLING 429

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + GK   A +++ ++ ++G++P+   ++T+I+ +C  G +++AL  +  M       D
Sbjct: 430 FFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVAD 489

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             TCN+L++  CR G LE+A  F       G   +SVT++ +I+          AF +  
Sbjct: 490 HFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFD 549

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M      P  +TY  +   L   G + EA KF           H++        P  +D
Sbjct: 550 KMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFF----------HRL-----RCIPNAVD 594

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             ++ ++ K+   C  G   DA+ +  E        +  TY NL+ GL K+ K ++
Sbjct: 595 --NVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVA 648



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 255/593 (43%), Gaps = 88/593 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ +TYNT++    ++GK+     +  +M    L+PN  TYN L++G+C  G + EA+R+
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337

Query: 68  VDLMTQNKSLPDVWTYNMLINGW-----------------------------------CN 92
           +D+M  +   P+  TY  L+NG                                    C 
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCK 397

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            GMLEEA +L  +M  + + PDVVT++ LIN FF  G+   A +++ ++ + G+ PN + 
Sbjct: 398 NGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL 457

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           ++ +I  YCK G + +A      M  +G   D  T N L+   C+ G +EEA   M+ M 
Sbjct: 458 YSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMS 517

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           R GL  N++T + I++         +A+ + +  +  G++    +YG L+ G       N
Sbjct: 518 RMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHIN 577

Query: 273 RALKLW-----------------------------------DEMKERQIMPSTFTYNAMI 297
            ALK +                                   +EM     +P  FTY  +I
Sbjct: 578 EALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            GL + GK   A+ +  + ++ G++ P+   + +++ G    G    AL    +M+ K  
Sbjct: 638 AGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDV 697

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +PD V  N+++    R+G   K      +   K    +  TYN L+    K   +   F 
Sbjct: 698 EPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFM 757

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           L  +M      PD++++ ++     +S   + A K    +   G +              
Sbjct: 758 LYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHV-------------- 803

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            ID    +++  I + C +   K A ++ ++  Q  +  N  TY  L NGLI+
Sbjct: 804 -ID--RFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIR 853



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 248/546 (45%), Gaps = 19/546 (3%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G + D+ T N ++    + GKL E    ++ M + GL PN  T++ +++GY   G 
Sbjct: 481  MNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGD 540

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              +A  V D M      P ++TY  L+ G C  G + EA +    +  +    D V +NT
Sbjct: 541  ALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNT 600

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
             +     SG   +A  LI+E+  +   P+  T+  +I   CK+GKI  A  +     E G
Sbjct: 601  KLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKG 660

Query: 181  F-SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              SP+   Y +L+D   K G+   A  + + M  K ++ +T+  N I+     + K  + 
Sbjct: 661  LLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKV 720

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
              +L++   +    +  +Y  L+ GY +     R   L+ +M     +P  F+++++I G
Sbjct: 721  NDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILG 780

Query: 300  LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
              QS   + AI +L  +   G + D  TFN +I  FC   +++KA +   +M +    P+
Sbjct: 781  YCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPN 840

Query: 360  IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            + T N L +GL R     KA +  +  +  G    +  Y TLI+ +C+   ++ A  L  
Sbjct: 841  VDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQD 900

Query: 420  EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE----------TGKINHQVVQP 469
            EM+   +       +AI   L  S ++E A     +M+E          T  ++    + 
Sbjct: 901  EMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEA 960

Query: 470  NTSKTPE--------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
            N +K  E         +    ++Y+  I+  C+ G  + A +++EE +Q+ +  N S Y+
Sbjct: 961  NVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYI 1020

Query: 522  NLMNGL 527
             L++  
Sbjct: 1021 VLIDSF 1026



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 203/421 (48%), Gaps = 1/421 (0%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEAM 65
            LPDN TY  ++  L KKGK+     L     ++GL+ PN   Y  LV G  K G  + A+
Sbjct: 627  LPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAAL 686

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             + + M      PD   +N++I+ +   G   +   +   M+S  L  ++ TYN L++ +
Sbjct: 687  YIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGY 746

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +       F L  ++  HG  P+  + + +I  YC+    D A KI+R +   G   D 
Sbjct: 747  AKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDR 806

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             T+N LI   C+   M++AF ++  M +  +  N  T N + + L       +A+ +L  
Sbjct: 807  FTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQV 866

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              + G       Y TLI G  R      A+KL DEMK   I       +A++ GL+ S K
Sbjct: 867  LLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKK 926

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             E AI +L+ +L+  +IP   TF T++H +C E  V KAL+  + M     K D+V  N+
Sbjct: 927  IENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNV 986

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            L+SGLC  G +E A K +     +    ++  Y  LI S C      ++  LL ++++++
Sbjct: 987  LISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRE 1046

Query: 426  L 426
            L
Sbjct: 1047 L 1047



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 216/489 (44%), Gaps = 38/489 (7%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  FG  P   TY  +L  L   G +NE       ++      +   +N  ++  C+ G 
Sbjct: 551  MNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGN 610

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR-KEMESLKLLPDVVTYN 119
            L +A+ +++ M  N  LPD +TY  LI G C  G +  A  L  K +E   L P+   Y 
Sbjct: 611  LSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYT 670

Query: 120  TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +L++   + G +  A  + +E+    ++P+ V  N++I  Y ++GK  K   I+  M+  
Sbjct: 671  SLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSK 730

Query: 180  GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
                +  TYN L+    K   M   F +   M R G   +  + ++++   C  K  D A
Sbjct: 731  NLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVA 790

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
              +L   +  G+ +D  ++  LIT +    +  +A +L  +M +  ++P+  TYNA+  G
Sbjct: 791  IKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNG 850

Query: 300  LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM-------- 351
            L ++    +A  +L  LL+SG +P    + T+I+G C  G ++ A++  ++M        
Sbjct: 851  LIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSH 910

Query: 352  ---------------------------VEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
                                       +E    P + T   L+   C+E  + KAL+  R
Sbjct: 911  NVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALEL-R 969

Query: 385  SWILKGKA-VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            S +      +D V YN LIS LC    +E AF L  EM+++ L P+   Y  +  +    
Sbjct: 970  SIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAG 1029

Query: 444  GRLEEAQKF 452
                E++K 
Sbjct: 1030 NYQIESEKL 1038



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 133/283 (46%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G LPD  ++++++    +    +    +L  +  +G V +R T+N+L++ +C+   +K+A
Sbjct: 766  GFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKA 825

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +V  M Q   +P+V TYN L NG        +A R+ + +     +P    Y TLIN 
Sbjct: 826  FELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLING 885

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                G    A KL DE+   GI  + V  + +++      KI+ A  ++  M E    P 
Sbjct: 886  MCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPT 945

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+ TL+   CK  N+ +A  +  +M    +K++ +  N ++  LC    ++ A+ L  
Sbjct: 946  VATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYE 1005

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
               +R  + +   Y  LI  +        + KL  ++++R++M
Sbjct: 1006 EMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELM 1048



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 70/143 (48%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G    NV  + I+  L    K+     +L  M +  ++P   T+  L+  YCK   
Sbjct: 902  MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A+ +  +M       DV  YN+LI+G C  G +E AF+L +EM+   L P+   Y  
Sbjct: 962  VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIV 1021

Query: 121  LINRFFESGRSMEAFKLIDELDE 143
            LI+ F      +E+ KL+ ++ +
Sbjct: 1022 LIDSFCAGNYQIESEKLLRDIQD 1044


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 229/417 (54%), Gaps = 3/417 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C PD + YN ++      G+++  R   ++   + +  +  T + L+ G C  G    A
Sbjct: 123 ACGPDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANA 179

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+D M + + +PDV TY +L+   C     ++A +L  EM      PD+VTYN ++N 
Sbjct: 180 LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 239

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A + +  L  +G +PN V++NI++K  C   + + A +++  M + G  P+
Sbjct: 240 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 299

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N LI   C+ G +E A  +++ + + G   N+++ N +LH  C +KK+D+A   L+
Sbjct: 300 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLD 359

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG Y D VSY TL+T   R  + + A++L  ++K++   P   +YN +I GL+++G
Sbjct: 360 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT++A+++LNE++  G+ PD  T++TI  G C E ++E A++   K+ +   +P+ V  N
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 479

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            ++ GLC+      A+  F   I  G   +  TY  LI  L  E  +++A  LL E+
Sbjct: 480 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 230/454 (50%), Gaps = 8/454 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T   ++  L   G+  E R +L+        P+   YN +++GYC  G +  A R 
Sbjct: 96  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARR- 149

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
                +     D +T + LI G C  G    A  +  EM   + +PDVVTY  L+    +
Sbjct: 150 --WCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 207

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                +A KL+DE+ + G  P+ VT+N+++   C+EG++D A + ++N+   G  P+ V+
Sbjct: 208 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 267

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN ++   C A   E+A  +M  MG+KG   N +T N ++  LC +  ++ A  +L    
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + +SY  L+  + + +K ++A+   D M  R   P   +YN ++  L +SG+ +
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 387

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++L++L   G  P   ++NT+I G    G+ ++AL+  N+MV K  +PDI+T + + 
Sbjct: 388 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 447

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GLCRE  +E A++ F      G   ++V YN +I  LCK R    A  L + M      
Sbjct: 448 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 507

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           P+  TY  +   L   G ++EA+     +   G+
Sbjct: 508 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGE 541



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 202/385 (52%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T +T++  L  +G+      +L +M ++  VP+  TY IL+   CK    K+AM+++
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      PD+ TYN+++NG C  G +++A    K + S    P+ V+YN ++     +
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 278

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  +A +L+ E+ + G  PN VT N++I + C++G ++ A +++  + + G SP+ ++Y
Sbjct: 279 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSY 338

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+ A CK   M++A   +D+M  +G   + ++ NT+L  LC   ++D A  LL+    
Sbjct: 339 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G     +SY T+I G  +  K   AL+L +EM  + + P   TY+ +  GL +  + E 
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 458

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AI    ++   G+ P+   +N II G C   +   A+     M+     P+  T  IL+ 
Sbjct: 459 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 518

Query: 369 GLCREGILEKALKFFRSWILKGKAV 393
           GL  EG++++A         +G+ +
Sbjct: 519 GLAYEGLIKEARDLLDELCSRGEEI 543



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 230/469 (49%), Gaps = 29/469 (6%)

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L EA+R+V     +   PD  T   LI     +G   EA R+          PDV+ Y
Sbjct: 81  GELDEALRLVG----SARRPDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAY 131

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N ++  +  +G+   A +   E     ++ +A T + +I+  C  G+   A  ++  M  
Sbjct: 132 NAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLR 188

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD VTY  L++A CK    ++A +++D M  KG   + +T N +++ +C E ++D+
Sbjct: 189 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 248

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   L +    G   + VSY  ++ G    E+   A +L  EM ++   P+  T+N +I 
Sbjct: 249 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 308

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G  E A+++L ++ + G  P+  ++N ++H FC + +++KA+ F + MV +   P
Sbjct: 309 FLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 368

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DIV+ N LL+ LCR G ++ A++       KG A   ++YNT+I  L K  + ++A  LL
Sbjct: 369 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 428

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +EM  K L PD  TY+ I   L    R+E+A +        GK+    ++PNT       
Sbjct: 429 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR------AFGKVQDMGIRPNT------- 475

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
               + Y+  I   C +     A+ +F      G   N+STY  L+ GL
Sbjct: 476 ----VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 213/446 (47%), Gaps = 30/446 (6%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           G L+EA RL          PD  T   LI +   SGR+ EA +++         P+ + +
Sbjct: 81  GELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAY 131

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N M+  YC  G++D A    R   E     D  T +TLI   C  G    A  ++D M R
Sbjct: 132 NAMMAGYCGAGQVDAA---RRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLR 188

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +    + +T   +L   C      +A  LL+    +G   D V+Y  ++ G  ++ + + 
Sbjct: 189 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 248

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A++    +      P+T +YN ++ GL  + + E A +++ E+ Q G  P+  TFN +I 
Sbjct: 249 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 308

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
             C +G VE AL+   ++ +    P+ ++ N LL   C++  ++KA+ F    + +G   
Sbjct: 309 FLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 368

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V+YNTL+++LC+   ++ A  LL ++++K   P   +Y  +   L ++G+ +EA +  
Sbjct: 369 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 428

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + MV  G                 + P  I+YS      C + R +DA++ F + +  GI
Sbjct: 429 NEMVSKG-----------------LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471

Query: 514 AINKSTYMNLMNGLIKRRKSISKAVD 539
             N   Y  ++ GL KRR++ S A+D
Sbjct: 472 RPNTVLYNAIILGLCKRRETHS-AID 496



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 189/355 (53%), Gaps = 35/355 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTYN +++ + ++G++++  + L ++   G  PN  +YNI++ G C    
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  ++  M Q    P+V T+NMLI+  C  G++E A  + +++      P+ ++YN 
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +  +A   +D +   G  P+ V++N ++   C+ G++D A +++  +++ G
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  ++YNT+ID   KAG  +EA  +++ M  KGL+ + IT +TI   LC E ++++  
Sbjct: 401 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED-- 458

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                                            A++ + ++++  I P+T  YNA+I GL
Sbjct: 459 ---------------------------------AIRAFGKVQDMGIRPNTVLYNAIILGL 485

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
            +  +T  AID+   ++ +G +P+E+T+  +I G   EG +++A    +++  + 
Sbjct: 486 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/409 (34%), Positives = 227/409 (55%), Gaps = 5/409 (1%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           GL  + T+ N L+SG  K+G + +   V   M + +  P + ++N++ING C  G L +A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK---LIDELDEHGIKPNAVTHNIM 156
             + ++M+   +  +V+TYNTLI+ + + G+  + +K   ++ E+   GI PN VT NI+
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           I  +CK+  +  A K+   M   G  P+ VTYN+LI+  C  G + EA  + D M    L
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           K N IT N +L+  C  K + +A  L +   K+G   +  +Y  LI  Y +DE    A  
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L+  M  + + P   TYN +I GL + G  E A ++++E+    +  D  T+N +I   C
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK-GKAVDS 395
           ++G+++KAL+  ++M  K  KP  +T N ++ G C+EG L  AL   RS + K G+  + 
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNL-RSQMEKVGRLANV 481

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
            TYN LI   CK+ +LEDA GLL+EM EK L P+R TY  +   ++E G
Sbjct: 482 ATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 210/372 (56%), Gaps = 3/372 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE---A 64
           P  +++N +++ L K GKLN+  D++ DMK +G+  N  TYN L+ GYCK+G + +   A
Sbjct: 161 PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKA 220

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M  +   P+  T+N+LI+G+C    +  A ++  EM    + P+VVTYN+LIN 
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G+  EA  L D++    +KPN +THN ++  +CK   + +A ++  +M + G +P+
Sbjct: 281 LCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LIDA CK  NME+AF +  +M  KG+  +  T N ++  LC +  L+ A  L++
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +    D ++Y  LI       +  +AL+L DEM  + + PS  TYN MI G  + G
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A+++ +++ + G + +  T+N +I GFC + ++E A    N+M+EK   P+ +T  
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520

Query: 365 ILLSGLCREGIL 376
           I+   +  +G +
Sbjct: 521 IVTEEMMEKGFV 532



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 202/363 (55%), Gaps = 19/363 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRD---LLSDMKKQGLVPNRTTYNILVSGYCK 57
           M+  G   + +TYNT++D   K GK+ ++     +L +M+  G+ PN  T+NIL+ G+CK
Sbjct: 189 MKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCK 248

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              +  AM+V   M +    P+V TYN LING CN G + EA  LR +M +  L P+++T
Sbjct: 249 DKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIIT 308

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +N L+N F ++    +A +L D++ + GI PN  T+NI+I  YCK+  ++ A  + R M 
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  PD  TYN LI   C+ G++E A  ++  M  K LK + IT N ++ +LC + ++ 
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL+   ++G    +++Y T+I GY ++     AL L  +M++   + +  TYN +I
Sbjct: 429 KALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLI 488

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  +  K E A  +LNE+L+ G+IP+  T+  +                  +M+EK F 
Sbjct: 489 KGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE----------------EMMEKGFV 532

Query: 358 PDI 360
           PDI
Sbjct: 533 PDI 535



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 212/426 (49%), Gaps = 23/426 (5%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           EAF+ R     LKL   V + N L++   + G   +   +  E+    I+P  ++ NI+I
Sbjct: 114 EAFK-RASDYGLKL--SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVI 170

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR---MMDVMGRK 214
              CK GK++KA  I+ +M+  G S + +TYNTLID  CK G + + ++   ++  M   
Sbjct: 171 NGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD 230

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+  N +T N ++   C +K +  A  +    +++G   + V+Y +LI G   + K N A
Sbjct: 231 GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA 290

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             L D+M    + P+  T+NA++ G  ++   +QA ++ +++ + G+ P+ TT+N +I  
Sbjct: 291 TALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA 350

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           +C +  +E A   +  M+ K   PD+ T N L++GLCR+G LE A         K    D
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            +TYN LI SLC +  ++ A  LL EM  K L P + TY  +     + G L  A    S
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS 470

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M + G++                  +  +Y+  I   C + + +DA  +  E  +KG+ 
Sbjct: 471 QMEKVGRL-----------------ANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLI 513

Query: 515 INKSTY 520
            N+ TY
Sbjct: 514 PNRMTY 519



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 212/420 (50%), Gaps = 20/420 (4%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           +  + L+  + ++ R+   F+      ++G+K +  + N ++    K G+I     + + 
Sbjct: 94  IIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKE 153

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M      P  +++N +I+  CK G + +A  +++ M  +G+  N IT NT++   C   K
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213

Query: 236 LDEAY---MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           + + Y    +L      G   +EV++  LI G+ +D+  + A+K++ EM  + + P+  T
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN++I GL  +GK  +A  + ++++ S + P+  T N +++GFC    V++A +  + M 
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           ++   P++ T NIL+   C++  +E A   +R  + KG   D  TYN LI+ LC++  LE
Sbjct: 334 KQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE 393

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  L+SEM+ K L  D  TY  +  +L   G +++A +    M   G            
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG------------ 441

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                + PS ++Y+  I+ +C +G  + AL +  +  + G   N +TY  L+ G  K+ K
Sbjct: 442 -----LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDK 496



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 20/384 (5%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N++  +I++  Y K  +     +  +   + G      + N L+    K G + +   + 
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M R+ ++   I+ N +++ LC   KL++A  ++     RG   + ++Y TLI GY + 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 269 EKANRALK---LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            K  +  K   +  EM+   I P+  T+N +I G  +      A+ +  E+ + G+ P+ 
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N++I+G C+ G+V +A    ++MV    KP+I+T N LL+G C+  ++++A + F  
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +G   +  TYN LI + CK+  +EDAF L   M  K + PD  TY  +   L   G 
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           LE A+   S M                   + +    I+Y+  I+  C++G  K AL++ 
Sbjct: 392 LEAARNLVSEM-----------------DTKHLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
           +E  +KG+  ++ TY  +++G  K
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCK 458



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 130/295 (44%), Gaps = 20/295 (6%)

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           E   +L S S   +  + +    L+  Y ++ +     + +    +  +  S  + N ++
Sbjct: 76  EQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLM 135

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL + G+      +  E+++  + P   +FN +I+G C  G++ KA      M  +   
Sbjct: 136 SGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS 195

Query: 358 PDIVTCNILLSGLCREGILEKALK---FFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
            +++T N L+ G C+ G + K  K     +     G   + VT+N LI   CK++ +  A
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAA 255

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             + +EM  + + P+  TY ++   L  +G++ EA      MV +               
Sbjct: 256 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC-------------- 301

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              + P+ I+++  +N  C     K A ++F++  ++GI  N +TY  L++   K
Sbjct: 302 ---LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 241/437 (55%), Gaps = 2/437 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T N +++     G++     +L+ + K+G  P+  T N L+ G C  G +K+A
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 65  MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +   D L+ Q   L  V +Y  LING C  G    A +L ++++     P+VV Y+T+I+
Sbjct: 149 LHFHDKLLAQGFQLNQV-SYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIID 207

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +     EA+ L  E+   GI  + VT++ +I  +C EGK+ +A  ++  M     +P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN L+DA CK G ++EA  ++ VM +  +K + IT +T++       ++ +A  + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N+ S  G   D  +Y  LI G+ +++  + AL L+ EM ++ ++P   TY+++I GL +S
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+     D+++E+   G   +  T++++I G C  G +++A+   NKM ++  +P+  T 
Sbjct: 388 GRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTF 447

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            ILL GLC+ G L+ A + F+  + KG  ++  TYN +I   CK+  LE+A  +LS+ME+
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMED 507

Query: 424 KKLGPDRYTYAAIHTAL 440
               PD  T+  I  AL
Sbjct: 508 NGCIPDAVTFEIIIIAL 524



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 240/470 (51%), Gaps = 17/470 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   + M   +  P +  +N +++ +        A  L   +E   + PD++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F   G+    F ++ ++ + G  P+ VT N +IK  C +G++ KA      +   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F  + V+Y TLI+  CK G+   A +++  +  +  K N +  +TI+  LC  + + EAY
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + +G   D V+Y TLI G+  + K   A+ L +EM  + I P+ +TYN ++  L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK ++A  +L  +L++ + PD  T++T++ G+    +V+KA    N M      PD+
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  IL++G C+  ++++AL  F+    K      VTY++LI  LCK  R+   + L+ E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++    +  TY+++   L ++G L+ A    + M + G                 I P
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG-----------------IRP 442

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           ++ +++  ++  C  GR KDA ++F++   KG  +N  TY  +++G  K+
Sbjct: 443 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQ 492



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 160/290 (55%), Gaps = 4/290 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++DAL K+GK+ E + +L+ M K  + P+  TY+ L+ GY  +  +K+A  V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M+     PDV TY +LING+C   M++EA  L KEM    ++P +VTY++LI+   +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR    + LIDE+ + G   N +T++ +I   CK G +D+A  +   M++ G  P+  T
Sbjct: 387 SGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFT 446

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +  L+D  CK G +++A  +   +  KG  +N  T N ++   C +  L+EA  +L+   
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506

Query: 248 KRGYYLDEVSYGTLITGYF-RDEKANRA---LKLWDEMKERQIMPSTFTY 293
             G   D V++  +I   F +DE         K+W+ ++ ++    + T+
Sbjct: 507 DNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSITF 556



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 169  ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
            A  +   +E  G  PD  T N LI+  C  G +   F ++  + ++G   +TIT  T+++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 229  TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             LC + ++++A    +    +G+ L++VSYGTLI G  +      A+KL  ++  R   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 289  STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
                YN +I  L +     +A  +  E+   G+  D  T+NT+I+GFC  G++++A+   
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 349  NKMVEKSFKPDIVTCNILLSGLCREG--ILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
            NKMV K+  P++ T NIL+  LC+EG  +L+++L         G   ++VT+  +IS+L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 407  KERRLEDAFGLLSEMEEKKL 426
            ++   +    LL EM  + L
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 163/350 (46%), Gaps = 52/350 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P  + +N ++D+  K  +   A  +   +  KG++ + ITLN +++  C          
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFC---------- 105

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
                     ++ ++++G                 +  ++ +R   P T T N +I GL 
Sbjct: 106 ----------HMGQITFG---------------FSVLAKILKRGYPPDTVTLNTLIKGLC 140

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G+ ++A+   ++LL  G   ++ ++ T+I+G C  G    A++   K+  +  KP++V
Sbjct: 141 LKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVV 200

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             + ++  LC+  ++ +A   F    +KG + D VTY+TLI   C E +L++A GLL+EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             K + P+ YTY  +  AL + G+++EA+   ++M++                   + P 
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC-----------------VKPD 303

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            I+YS  ++ +      K A  +F      G+  +  TY  L+NG  K +
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 39   QGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE 98
            +G+ P+  T NIL++ +C +G +     ++  + +    PD  T+  LING C  G + +
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 99   AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
            A     ++ +     + V+Y TLIN   + G +  A KL+ ++D    KP+ V +N +I 
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 159  WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
              CK   + KA  +   M   G S D VTYNTLI   C  G ++EA  +++ M  K +  
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 219  NTITLNTILHTLCCEKK--LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
            N  T N ++  LC E K  LDE+  +L+     G   + V++  +I+  F  ++ ++  K
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 277  LWDEMKERQIM 287
            L  EM  R ++
Sbjct: 1195 LLHEMIARGLL 1205



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 2/259 (0%)

Query: 134  AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
            A  L   L+  GI+P+  T NI+I  +C  G+I     I+  + + G+ PD +T+ TLI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 194  ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
              C  G + +A    D +  +G ++N ++  T+++ +C       A  LL     R    
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 254  DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
            D V Y T+I    + +  ++A  L+ EM  + I     TYN +I+G    GK ++AI +L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 314  NELLQSGMIPDETTFNTIIHGFCSEGQ--VEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
            N+++   + P+  T+N ++   C EG+  ++++L   +KM +   K + VT  I++S L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 372  REGILEKALKFFRSWILKG 390
             +   +K  K     I +G
Sbjct: 1185 EKDENDKVEKLLHEMIARG 1203



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 127/249 (51%), Gaps = 4/249 (1%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD  T N +++     G++     +L+ + K+G  P+  T+  L++G C  G + +A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 65   MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            +   D L+ Q   L  V +Y  LING C  G    A +L ++++     PDVV YNT+I+
Sbjct: 1016 LHFHDKLLAQGFQLNQV-SYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 124  RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               +     +A+ L  E++  GI  + VT+N +I  +C  GK+ +A  ++  M     +P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 184  DCVTYNTLIDANCKAGN--MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            +  TYN L+DA CK G   ++E+  M+  M   G K N +T   I+  L  + + D+   
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 242  LLNSASKRG 250
            LL+    RG
Sbjct: 1195 LLHEMIARG 1203



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 131/260 (50%), Gaps = 2/260 (0%)

Query: 99   AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
            A  L   +E   + PD+ T N LIN F   G+    F ++ ++ + G  P+ +T   +I 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 159  WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
              C +G+++KA      +   GF  + V+Y TLI+  CK G+   A +++  +  +  K 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 219  NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
            + +  NTI+  LC  + + +AY L    + +G   D V+Y TLI G+    K   A+ L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 279  DEMKERQIMPSTFTYNAMIWGLSQSGKT--EQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
            ++M  + I P+  TYN ++  L + GK   ++++ ML+++  +G   +  TF  II    
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 337  SEGQVEKALQFHNKMVEKSF 356
             + + +K  +  ++M+ +  
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 103/194 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY  +++   K   ++E  +L  +M ++ +VP   TY+ L+ G CK G 
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     ++D M       +V TY+ LI+G C  G L+ A  L  +M+   + P+  T+  
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + GR  +A ++  +L   G   N  T+N+MI  +CK+G +++A  ++  ME+NG
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509

Query: 181 FSPDCVTYNTLIDA 194
             PD VT+  +I A
Sbjct: 510 CIPDAVTFEIIIIA 523



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 37/224 (16%)

Query: 274  ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            A+ L   ++ + I P  FT N +I      G+      +L ++L+ G  PD  TF T+I+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 334  GFCSEGQVEKALQFHNKMVEKSF-----------------------------------KP 358
            G C +GQV KAL FH+K++ + F                                   KP
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 359  DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            D+V  N ++  LC+  ++ KA   F    +KG + D VTYNTLI   C   +L++A GLL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 419  SEMEEKKLGPDRYTYAAIHTALVESGR--LEEAQKFTSIMVETG 460
            ++M  K + P+  TY  +  AL + G+  L+E+    S M + G
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG 1168



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 17/264 (6%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +  + A+  ++ M   +  P    +N ++   ++      A+ + + L   G+ PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+ FC  GQ+        K++++ + PD VT N L+ GLC +G ++KAL F    + 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G  ++ V+Y TLI+ +CK      A  LL +++ +   P+   Y+ I  AL +   + E
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A    S M   G                 I    ++YS  I   C +G+ K+A+ +  E 
Sbjct: 218 AYGLFSEMTVKG-----------------ISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             K I  N  TY  L++ L K  K
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGK 284



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 18/158 (11%)

Query: 388  LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            LKG   D  T N LI+  C   ++   F +L+++ ++   PD  T+  +   L   G++ 
Sbjct: 954  LKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVN 1013

Query: 448  E---------AQKFTSIMVETGKINHQVVQPNTSKTP----EEID-----PSSISYSEKI 489
            +         AQ F    V  G + + V +   ++       +ID     P  + Y+  I
Sbjct: 1014 KALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTII 1073

Query: 490  NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +  C       A  +F E   KGI+ +  TY  L+ G 
Sbjct: 1074 DALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGF 1111


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 253/494 (51%), Gaps = 17/494 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C P+   YN +++A   +G+ ++     + M ++G  P   T+N +++ +CK G 
Sbjct: 292 MPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGN 351

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++ D + +    P+   YN L+NG+     +++A  L +EM    + PD +T+N 
Sbjct: 352 VVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNI 411

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  ++ GR  +  +L+ ++   G+ P+    +I +   C  G++D+A + + +M E G
Sbjct: 412 LVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKG 471

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  + +N++I A  +AG  ++AF    +M   GL  +  T +++L  L    +L EA 
Sbjct: 472 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEAT 531

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+    ++G  ++ +++  L+  +F+      A  LW EM+ R I P    ++A I GL
Sbjct: 532 ELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGL 591

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G  E+A ++  E+L+ G+IP+   +N++I GFC  G++ +AL+    M  +   PDI
Sbjct: 592 SKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDI 651

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++ GLC++G +  A+  F      G + D +TYNTLI+  CK   + +A  L++ 
Sbjct: 652 FTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNR 711

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  TY         S R+  A      +V  G                 I P
Sbjct: 712 MYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG-----------------IVP 754

Query: 481 SSISYSEKINEHCS 494
           ++++Y+  +N  CS
Sbjct: 755 NTVTYNSMLNGVCS 768



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 260/546 (47%), Gaps = 20/546 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P       +   L + G    V  L  D+ ++G  P + T++ ++ G+C+ G 
Sbjct: 222 MREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGC 281

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     ++ LM +    P+ + YN++IN  C  G   +A      M      P VVT+NT
Sbjct: 282 IHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNT 341

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F + G  +EA KL D L E G  PNA+ +N ++  Y K  +ID+A  +   M + G
Sbjct: 342 VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKG 401

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD +T+N L+  + K G  E+  R++  +   GL  +    +  +  LC   +LDEA 
Sbjct: 402 IAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAM 461

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L    ++G     +++ ++I  Y +    ++A + +  M    + PS  T ++++ GL
Sbjct: 462 EFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGL 521

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S +G+ ++A +++ ++++ G+  +   F  ++  F   G V  A     +M  +   PD+
Sbjct: 522 SINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDV 581

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  +  + GL ++G++E+A   F   + KG   ++  YN+LI   CK  +L +A  L   
Sbjct: 582 VAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKV 641

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----SKTP 475
           M  + L PD +T   I   L + GR+  A      M +TG ++  ++  NT      K  
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTG-LSPDIITYNTLINGYCKAF 700

Query: 476 EEI--------------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           + +              +P   +Y+ +I+  CS  R   A+ + +E    GI  N  TY 
Sbjct: 701 DMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYN 760

Query: 522 NLMNGL 527
           +++NG+
Sbjct: 761 SMLNGV 766



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 252/524 (48%), Gaps = 41/524 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VT+NT+++A  K+G + E R L   +K+ G  PN   YN L++GY K+  + +A
Sbjct: 331 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA 390

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M +    PD  T+N+L++G    G  E+  RL K++  L LLPD   ++  ++ 
Sbjct: 391 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 450

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +GR  EA + + ++ E G+ P+ +  N +I  Y + G  DKA +  + M   G +P 
Sbjct: 451 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 510

Query: 185 CVTYNTLIDANCKAGNMEEA--------------------------FRMMDVMG------ 212
             T ++L+      G ++EA                          F+  DV+G      
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570

Query: 213 ---RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
              R+G+  + +  +  +  L  +  ++EAY +     ++G   +  +Y +LI G+ +  
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 630

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K N ALKL   M+ R ++P  FT N +I GL + G+   AI++  ++ Q+G+ PD  T+N
Sbjct: 631 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 690

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I+G+C    +  A    N+M      PD+ T NI + G C    + +A+      +  
Sbjct: 691 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 750

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE- 448
           G   ++VTYN++++ +C +  L+ A  L + + +    P+  T   + +   + G  E  
Sbjct: 751 GIVPNTVTYNSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERT 809

Query: 449 ---AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
                K + I     +I ++++        E+ D S ++ ++ +
Sbjct: 810 LMWGHKLSEIPYAFDEITYKIMD-KAHHILEDADFSRVTSAKSL 852



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 245/540 (45%), Gaps = 63/540 (11%)

Query: 15  TILDAL---FKKGKLN-EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           ++LD+L   F   ++  +  ++L  M++ G+ P+ +   IL     ++G      ++   
Sbjct: 197 SVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKD 256

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +    P  +T++ +I G+C  G +     L      L L+P                 
Sbjct: 257 VIRRGPQPCKYTFSGIILGFCRKGCIHLGESL------LHLMP----------------- 293

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
                       +   +PNA  +NI+I   C  G+   A      M E G +P  VT+NT
Sbjct: 294 ------------KFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNT 341

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +I+A CK GN+ EA ++ D +   G   N I  NT+++     +++D+A ML     K+G
Sbjct: 342 VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKG 401

Query: 251 YYLDEVSYGTLITGYF---RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
              D +++  L++G++   R+E  +R LK   ++    ++P    ++  + GL  +G+ +
Sbjct: 402 IAPDGITFNILVSGHYKYGREEDGDRLLK---DISVLGLLPDRSLFDISVSGLCWAGRLD 458

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A++ L ++L+ G+ P    FN++I  +   G  +KA + +  MV     P   TC+ LL
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 518

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL   G L++A +     I KG +V+++ +  L+    K   +  A  L  EME + + 
Sbjct: 519 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 578

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV------------QPNTSKTP 475
           PD   ++A    L + G +EEA      M+  G I +               + N +   
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638

Query: 476 EEID------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           E++       P   + +  I   C QGR + A+ +F +  Q G++ +  TY  L+NG  K
Sbjct: 639 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCK 698



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 17/209 (8%)

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D +  ++++  F +     +AL+   +M E   +P      IL   L R G      K F
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +  I +G      T++ +I   C++  +     LL  M +    P+ + Y  +  A    
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           GR  +A  + ++M+E G                  +P+ ++++  IN  C +G   +A +
Sbjct: 315 GRTSDALAWFNLMIERG-----------------CNPTVVTFNTVINAFCKEGNVVEARK 357

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +F+  ++ G + N   Y  LMNG +K R+
Sbjct: 358 LFDGLKEMGFSPNAIMYNTLMNGYVKMRE 386


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 241/463 (52%), Gaps = 3/463 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD V    ++    K G+      ++  +++ G V +  +YN+L++ YCK G ++EA
Sbjct: 99  GKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA 158

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +RV+D        P+  TY+ ++   C+ G L++A ++       K  PDVVT   LI+ 
Sbjct: 159 LRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDA 215

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A KL +E+   G KP+ VT+N++IK +CKEG++D+A   ++ +   G   D
Sbjct: 216 TCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSD 275

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +++N ++ + C  G   +A +++  M RKG   + +T N +++ LC +  L +A  +L 
Sbjct: 276 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLE 335

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G+  +  S+  LI G+   +  +RA++  + M  R   P   TYN ++  L + G
Sbjct: 336 MMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDG 395

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+ +L++L   G  P   ++NT+I G    G+ E A++   +M  K  KPD++TC 
Sbjct: 396 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 455

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL REG + +A+KFF      G   ++  YN+++  LCK ++   A   L +M   
Sbjct: 456 SVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVAN 515

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
              P   +Y  +   +   G  EEA K ++ +   G +   ++
Sbjct: 516 GCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLI 558



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 220/426 (51%), Gaps = 3/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G + D  +YN +++A  K G   E+ + L  +    + PN  TY+ ++   C  G 
Sbjct: 130 LEESGAVIDANSYNVLINAYCKSG---EIEEALRVLDHTSVAPNAATYDAVLCSLCDRGK 186

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+AM+V+D   Q+K  PDV T  +LI+  C    + +A +L  EM      PDVVTYN 
Sbjct: 187 LKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNV 246

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + GR  EA   + +L  +G + + ++HN++++  C  G+   A K++  M   G
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VT+N LI+  C+ G + +A  ++++M + G   N+ + N ++   C  K +D A 
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAI 366

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG Y D V+Y  L+T   +D K + A+ +  ++  +   PS  +YN +I GL
Sbjct: 367 EHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 426

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK E A+++L E+   G+ PD  T  +++ G   EG+V +A++F + +     KP+ 
Sbjct: 427 LKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNA 486

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N ++ GLC+      A+ F    +  G      +Y TLI  +  E   E+A  L +E
Sbjct: 487 FIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNE 546

Query: 421 MEEKKL 426
           +  + L
Sbjct: 547 LYSRGL 552



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 200/409 (48%), Gaps = 20/409 (4%)

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
           R   +G   E  + ++ +   G  P+ V    +I+ +CK G+   A +I+  +EE+G   
Sbjct: 78  RLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVI 137

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  +YN LI+A CK+G +EEA R++D      +  N  T + +L +LC   KL +A  +L
Sbjct: 138 DANSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVL 194

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   +   Y D V+   LI    ++    +A+KL++EM+ +   P   TYN +I G  + 
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKE 254

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ ++AI  L +L   G   D  + N I+   CS G+   A++    M+ K   P +VT 
Sbjct: 255 GRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTF 314

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NIL++ LC++G+L KAL         G   +S ++N LI   C  + ++ A   L  M  
Sbjct: 315 NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVS 374

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +   PD  TY  + TAL + G++++A    S +   G                   PS I
Sbjct: 375 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG-----------------CSPSLI 417

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           SY+  I+     G+ + A+++ EE   KG+  +  T  +++ GL +  K
Sbjct: 418 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 466



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 21/353 (5%)

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G +EE  R ++ M  KG   + +    ++   C   +   A  ++    + G  +D  SY
Sbjct: 83  GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSY 142

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             LI  Y +  +   AL++ D      + P+  TY+A++  L   GK +QA+ +L+  LQ
Sbjct: 143 NVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQ 199

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           S   PD  T   +I   C E  V +A++  N+M  K  KPD+VT N+L+ G C+EG L++
Sbjct: 200 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDE 259

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A+ F +     G   D +++N ++ SLC   R  DA  LL+ M  K   P   T+  +  
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN 319

Query: 439 ALVESGRLEEAQKFTSIMVETGKI-NHQVVQP---------NTSKTPEEID--------P 480
            L + G L +A     +M + G   N +   P            +  E ++        P
Sbjct: 320 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP 379

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             ++Y+  +   C  G+  DA+ I  +   KG + +  +Y  +++GL+K  K+
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 432



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 17/179 (9%)

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L  L R G LE+  +F      KGK  D V    LI   CK  R ++A  ++  +EE   
Sbjct: 76  LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGA 135

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKF---TSI-------------MVETGKINHQVVQPN 470
             D  +Y  +  A  +SG +EEA +    TS+             + + GK+  Q +Q  
Sbjct: 136 VIDANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLK-QAMQVL 194

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             +   +  P  ++ +  I+  C +     A+++F E R KG   +  TY  L+ G  K
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 271/525 (51%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+V+Y +++  L K G+L E  +L + M+ +  VP    YN ++ GY   G  ++A
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++ + +   +P V ++N ++        ++EA  L + M+     P+  TYN +I+ 
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDM 263

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA++++DE++   + PN +T NIM+   CK  K+++A KI  +  + G +PD
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           CVTY +LID   K G ++EA+R+ + M   G   N +   +++       + ++ + +  
Sbjct: 324 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFK 383

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG   D     T +   F+  +  +   ++++++    +P   +Y+ +I GL+++G
Sbjct: 384 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 443

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +  ++ + + Q G   D   +N ++ GFC  G+V KA +   +M EK  +P + T  
Sbjct: 444 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 503

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL +   L++A   F     KG  ++ V Y++LI    K  R+++A+ +L EM +K
Sbjct: 504 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 563

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+ YT+ ++  ALV++  + EA      M E              K P    P++ +
Sbjct: 564 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM-------------KCP----PNTYT 606

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           YS  IN  C   +Y  A   +++ +++G+  N  TY  +++GL K
Sbjct: 607 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 651



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 265/557 (47%), Gaps = 53/557 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    Y  ++ AL +  +     +LL  M++ G       +  LV    + G + +A+ +
Sbjct: 43  PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 102

Query: 68  VDLMTQNKSLPDVWTYNMLINGW-----------------------------------CN 92
           VD +  +   PD+  YN+ I+ +                                   C 
Sbjct: 103 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCK 162

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
           AG L EA  L  +ME+ + +P    YNT+I  +  +GR  +A+KL++ L E G  P+ V+
Sbjct: 163 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 222

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            N ++    K+ K+D+A  +   M+++   P+  TYN +ID  C  G +EEA+R++D M 
Sbjct: 223 FNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEME 281

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              L  N +T+N ++  LC  +KL+EAY +  SAS+RG   D V+Y +LI G  +  + +
Sbjct: 282 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 341

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L+++M +     +   Y ++I      G+ E    +  EL++ G  PD T  NT +
Sbjct: 342 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYM 401

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
                 G+VEK       +    F PD+ + +IL+ GL + G   +    F +   +G A
Sbjct: 402 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +D+  YN ++   CK  ++  A+ +L EM+EK + P   TY AI   L +  RL+EA   
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA--- 518

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
                      + + +   SK    I+ + + YS  I+     GR  +A  I EE  +KG
Sbjct: 519 -----------YMLFEEAKSKG---IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564

Query: 513 IAINKSTYMNLMNGLIK 529
           +  N  T+ +L++ L+K
Sbjct: 565 LTPNVYTWNSLLDALVK 581



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 228/463 (49%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++ TYN I+D L   G++ E   +L +M+   L PN  T NI+V   CK   L+EA ++
Sbjct: 252 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 311

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  +Q    PD  TY  LI+G    G ++EA+RL ++M       + V Y +LI  FF 
Sbjct: 312 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 371

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +  K+  EL   G KP+    N  +    K G+++K   I  ++   GF PD  +
Sbjct: 372 HGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 431

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI    KAG   E   +   M ++G  ++    N ++   C   K+ +AY +L    
Sbjct: 432 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++       +YG ++ G  + ++ + A  L++E K + I  +   Y+++I G  + G+ +
Sbjct: 492 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 551

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L E+++ G+ P+  T+N+++       ++ +AL     M E    P+  T +IL+
Sbjct: 552 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 611

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GLCR     KA  F++    +G   + VTY T+IS L K   + DA+ L    +     
Sbjct: 612 NGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 671

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           PD  ++ A+   +  + R  EA + T   + +   +   + P+
Sbjct: 672 PDAASFNALIEGMSNANRAMEAYQTTVYQLSSSSCSWNFLVPD 714



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 239/445 (53%), Gaps = 1/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V++N+IL  L KK K++E   L   MKK    PN +TYNI++   C  G ++EA
Sbjct: 215 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEA 273

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++D M      P++ T N++++  C A  LEEA+++ +        PD VTY +LI+ 
Sbjct: 274 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 333

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  EA++L +++ + G   N V +  +I+ +   G+ +   K+ + +   G  PD
Sbjct: 334 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPD 393

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG +E+   + + +   G   +  + + ++H L    +  E   + +
Sbjct: 394 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 453

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G+ LD  +Y  ++ G+ +  K ++A ++ +EMKE+ + P+  TY A++ GL++  
Sbjct: 454 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 513

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     +M++K   P++ T N
Sbjct: 514 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 573

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        ++ TY+ LI+ LC+ ++   AF    +M+++
Sbjct: 574 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 633

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
            L P+  TY  + + L + G + +A
Sbjct: 634 GLVPNVVTYTTMISGLAKVGNITDA 658



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 254/527 (48%), Gaps = 18/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME    +P    YNT++      G+  +   LL  ++++G +P+  ++N +++   K   
Sbjct: 176 MEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 235

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + ++M ++   P+  TYN++I+  C  G +EEA+R+  EME   L P+++T N 
Sbjct: 236 VDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 294

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++R  ++ +  EA+K+ +   + G  P+ VT+  +I    K+G++D+A ++   M + G
Sbjct: 295 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + + V Y +LI      G  E+  ++   + R+G K +   LNT +  +    ++++  
Sbjct: 355 HNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 414

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           M+       G+  D  SY  LI G  +  +A     ++  MK++        YNA++ G 
Sbjct: 415 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SGK  +A ++L E+ +  + P   T+  I+ G     ++++A     +   K  + ++
Sbjct: 475 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 534

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  + L+ G  + G +++A       + KG   +  T+N+L+ +L K   + +A      
Sbjct: 535 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 594

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+E K  P+ YTY+ +   L    +  +A  F   M + G +                 P
Sbjct: 595 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV-----------------P 637

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           + ++Y+  I+     G   DA  +FE  +  G   + +++  L+ G+
Sbjct: 638 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 684



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 233/513 (45%), Gaps = 34/513 (6%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           +PN+   + L +   +   L +A+  V +M + K  P    Y +LI     A   E A  
Sbjct: 8   LPNQACAD-LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           L ++M+ +     V  + TL+      G+  +A  L+DE+    ++P+ V +N+ I  + 
Sbjct: 67  LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 126

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K G +D ACK    ++  G  PD V+Y ++I   CKAG + EA  +   M  +       
Sbjct: 127 KAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 186

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
             NT++       + ++AY LL    +RG     VS+ +++T   +  K + AL L++ M
Sbjct: 187 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           K +   P++ TYN +I  L   G+ E+A  +L+E+  + + P+  T N ++   C   ++
Sbjct: 247 K-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKL 305

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E+A +      ++   PD VT   L+ GL ++G +++A + F   +  G   + V Y +L
Sbjct: 306 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 365

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPD-----RYTYAAIHTALVESGRL--EEAQKFT- 453
           I +     R ED   +  E+  +   PD      Y         VE GR+  E+ + +  
Sbjct: 366 IRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 425

Query: 454 -------SIMV----------ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                  SI++          ET  I H + Q   +           +Y+  ++  C  G
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR-------AYNAVVDGFCKSG 478

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +   A +I EE ++K +    +TY  +++GL K
Sbjct: 479 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 511



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 19/301 (6%)

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           GY L   +   L     R  + + A+     M+  +  P+   Y  +I  L+++ + E+A
Sbjct: 5   GYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 64

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           +++L ++ + G       F T++     EGQV  AL   +++     +PDIV  N+ +  
Sbjct: 65  LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDC 124

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
             + G ++ A KFF     +G   D V+Y ++I  LCK  RL +A  L ++ME ++  P 
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 184

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT--------------- 474
            Y Y  +      +GR E+A K    + E G I   VV  N+  T               
Sbjct: 185 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCI-PSVVSFNSILTCLGKKRKVDEALSLF 243

Query: 475 ---PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
               ++ +P+S +Y+  I+  C  GR ++A +I +E     +  N  T   +++ L K R
Sbjct: 244 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 303

Query: 532 K 532
           K
Sbjct: 304 K 304



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 18/340 (5%)

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L  A  +A  +++A   + VM R   +        ++  L   ++ + A  LL    + G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           Y +    + TL+    R+ +   AL L DE+K   + P    YN  I    ++G  + A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
              +EL   G+ PD+ ++ ++I   C  G++ +A +   +M  +   P     N ++ G 
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
              G  E A K       +G     V++N++++ L K+R++++A  L  E+ +K   P+ 
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 254

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  I   L   GR+EEA +    M       H  + PN            ++ +  ++
Sbjct: 255 STYNIIIDMLCLGGRVEEAYRILDEM------EHASLFPNL-----------LTVNIMVD 297

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             C   + ++A +IFE   Q+G   +  TY +L++GL K+
Sbjct: 298 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 337



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 72/132 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  T+N++LDAL K  ++NE       MK+    PN  TY+IL++G C++    +A
Sbjct: 564 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 623

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
                 M +   +P+V TY  +I+G    G + +A+ L +  ++   +PD  ++N LI  
Sbjct: 624 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 683

Query: 125 FFESGRSMEAFK 136
              + R+MEA++
Sbjct: 684 MSNANRAMEAYQ 695



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 56/101 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C P+  TY+ +++ L +  K N+      DM+KQGLVPN  TY  ++SG  K+G 
Sbjct: 595 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 654

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           + +A  + +    N  +PD  ++N LI G  NA    EA++
Sbjct: 655 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 244/478 (51%), Gaps = 4/478 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VT + +++     G++     +L  + K G  PN      L+ G C  G 
Sbjct: 158 MEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGE 217

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+++   D +       +  +Y  L+NG C  G    A +L + +E     PDVV YNT
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EA+    E++  GI P+ +T++ +I  +C  G++  A  ++  M    
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  TY  LIDA CK G ++EA  ++ VM ++G+K N +T +T++   C   ++  A 
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++  +        SY  +I G  + +  + A+ L  EM  + ++P+T TYN++I GL
Sbjct: 398 QIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL 457

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+   A+D++ EL   G   D  T+ +++ G C    ++KA+    KM E+  +P+ 
Sbjct: 458 CKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNK 517

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ GLC+   L+ A K F+  ++KG  +D  TYN +I  LCKE  L++A  + S+
Sbjct: 518 YTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSK 577

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN----HQVVQPNTSKT 474
           ME+    PD  T+  I  +L E    ++A+K    M+  G ++    H    P T+K 
Sbjct: 578 MEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFHGERSPVTNKV 635



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 235/469 (50%), Gaps = 17/469 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   + M   ++ P +  +  ++           A  L K+ME   + PD+VT + 
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F   G+   +F ++ ++ + G +PN +    ++K  C +G++ K+      +   G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F  + V+Y TL++  CK G    A +++ ++  +  + + +  NTI+  LC +K ++EAY
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                 + RG + D ++Y TLI G+    +   A  L +EM  + I P  +TY  +I  L
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK ++A ++L  + + G+ P+  T++T++ G+C  G+V  A Q  + MV+    P +
Sbjct: 353 CKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSV 412

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + NI+++GLC+   +++A+   R  + K    ++VTYN+LI  LCK  R+  A  L+ E
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +  +    D  TY ++   L ++  L++A      M E G                 I P
Sbjct: 473 LHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG-----------------IQP 515

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +Y+  I+  C   R K+A ++F+    KG  I+  TY  ++ GL K
Sbjct: 516 NKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/503 (23%), Positives = 229/503 (45%), Gaps = 49/503 (9%)

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
           +P++ T ++LIN   + G +  +F +  ++  L   P+ +T  TL+      G +  A K
Sbjct: 8   VPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMK-----GETRCAIK 62

Query: 137 LIDELDEHGIKP-----NAVTHNIM------------IKWYCKEGKIDKACKIVRNMEEN 179
           L   +++   +P     ++++H+I               ++ +   I        + + N
Sbjct: 63  LPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVS-QFN 121

Query: 180 GF-----SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           G      +P  + +  ++ +  K  +   A  +   M  KG++ + +TL+ +++  C   
Sbjct: 122 GMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLG 181

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           ++  ++ +L    K GY  + +   TL+ G     +  ++L   D++  +    +  +Y 
Sbjct: 182 QMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYG 241

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ GL + G+T  AI +L  +      PD   +NTII G C +  V +A  F+ +M  +
Sbjct: 242 TLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSR 301

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              PD++T + L+ G C  G L  A        LK    D  TY  LI +LCKE +L++A
Sbjct: 302 GIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEA 361

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--- 471
             LL  M ++ + P+  TY+ +       G +  A++    MV+T ++N  V   N    
Sbjct: 362 KNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT-EVNPSVCSYNIMIN 420

Query: 472 ----SKTPEE------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                K+ +E            + P++++Y+  I+  C  GR   AL + +E   +G   
Sbjct: 421 GLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPA 480

Query: 516 NKSTYMNLMNGLIKRRKSISKAV 538
           +  TY +L++GL K + ++ KA+
Sbjct: 481 DVITYTSLLDGLCKNQ-NLDKAI 502



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 147/388 (37%), Gaps = 81/388 (20%)

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           KG+  N +TL+ +++ L    ++  ++ +L    K GY  + ++  TL+ G  R      
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETR-----C 59

Query: 274 ALKLWDEMKERQIMP---------------------STFTYNAMIWGLSQSGKTEQAIDM 312
           A+KL   +++R   P                      TF +       S       A+  
Sbjct: 60  AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS---- 368
            N +L     P    F  I+           A+    +M  K  +PD+VT +IL++    
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 369 -------------------------------GLCREGILEKALKFFRSWILKGKAVDSVT 397
                                          GLC +G ++K+L F    + +G  ++ V+
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y TL++ LCK      A  LL  +E++   PD   Y  I   L +   + EA  F + M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 458 ETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKINEHCSQGRY 498
             G I   V+  +T                     T + I+P   +Y+  I+  C +G+ 
Sbjct: 300 SRG-IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKL 358

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNG 526
           K+A  +     ++G+  N  TY  LM+G
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDG 386


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 226/414 (54%), Gaps = 3/414 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD + YN ++      G+L+  R L++DM  +   P+  TYN L+ G C  G    A+ V
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVE---PDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M +   LPDV TY +L+   C     ++A +L  EM      PD+VTYN ++N   +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A + +  L  +G +PN V++NI++K      + + A K++  M   G  P+ VT
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N LI   C+ G +E A  +++ M + G   N+++ N +LH  C +KK+ +A   +    
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG Y D VSY TL+T   R+ + + A++L  ++K++   P   +YN +I GL+++GKT+
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++L+E+   G+ PD  T++TI  G C E ++E+A++   K+ +   +P     N +L
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            GLC+      A+  F   I  G   +  TY  L+  L  E  +++A  L +++
Sbjct: 489 LGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 239/459 (52%), Gaps = 12/459 (2%)

Query: 19  ALFKK----GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN 74
           AL KK    G+  + R +L+        P+   YN +V+GYC  G L  A R+V  M   
Sbjct: 109 ALIKKLCASGRTADARRVLAASG-----PDVMVYNAMVAGYCGAGQLDAARRLVADMPVE 163

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
              PD +TYN LI G C  G    A  + ++M     LPDVVTY  L+    +     +A
Sbjct: 164 ---PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            KL+DE+ + G  P+ VT+N+++   C+EG+++ A + ++N+   G  P+ V+YN ++  
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKG 280

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
              A   E+A ++M+ M  KG   N +T N ++  LC    ++ A  +L    + G   +
Sbjct: 281 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPN 340

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
            +SY  L+  + + +K ++A++  + M  R   P   +YN ++  L ++G+ + AI++L+
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           +L   G  P   ++NT+I G    G+ ++AL+  ++M  K  +PDI+T + + SGLCRE 
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +E+A++ F      G    +  YN ++  LCK R   +A  L + M      P+  TY 
Sbjct: 461 RIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYT 520

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
            +   L   G ++EA++  + +   G +N ++++  + K
Sbjct: 521 ILVEGLAYEGLVKEARELFAQLCSRGVVNKKLMKKGSIK 559



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 205/383 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT++  L  +G+ +    +L DM ++G +P+  TY IL+   CK    K+AM++
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD+ TYN+++NG C  G +E+A    K + S    P+ V+YN ++   F 
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +A KL++E+   G  PN VT N++I + C+ G ++ A +++  M + G +P+ ++
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+ A CK   + +A   +++M  +G   + ++ NT+L  LC   ++D A  LL+   
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G     +SY T+I G  +  K   AL+L DEM  + + P   TY+ +  GL +  + E
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+    ++   G+ P    +N I+ G C   +   A+     M+     P+  T  IL+
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 368 SGLCREGILEKALKFFRSWILKG 390
            GL  EG++++A + F     +G
Sbjct: 524 EGLAYEGLVKEARELFAQLCSRG 546



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 238/471 (50%), Gaps = 27/471 (5%)

Query: 59  GWLKEAMRVVD-LMTQNKSLPD-VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           G L +A+R+VD L   N   P  V     LI   C +G   +A R+          PDV+
Sbjct: 81  GELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAASG-----PDVM 135

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            YN ++  +  +G+   A +L+ ++    ++P+A T+N +I+  C  G+   A  ++ +M
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G  PD VTY  L++A CK    ++A +++D M  KG   + +T N +L+ +C E ++
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           ++A   L +    G   + VSY  ++ G F  E+   A KL +EM  +   P+  T+N +
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNML 312

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I  L + G  E A+++L ++ Q G  P+  ++N ++H FC + ++ KA++F   MV +  
Sbjct: 313 ISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGC 372

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            PDIV+ N LL+ LCR G ++ A++       KG +   ++YNT+I  L K  + ++A  
Sbjct: 373 YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALE 432

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL EM  K L PD  TY+ I + L    R+EEA +    + + G                
Sbjct: 433 LLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG---------------- 476

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            I P++  Y+  +   C +    +A+ +F      G   N+STY  L+ GL
Sbjct: 477 -IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGL 526



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 199/350 (56%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD VTY  +L+A  K+    +   LL +M  +G  P+  TYN++++G C+ G +++A
Sbjct: 196 GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDA 255

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M  +  +      P+  +YN+++ G   A   E+A +L +EM      P+VVT+N LI+ 
Sbjct: 256 MEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISF 315

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    A ++++++ ++G  PN++++N ++  +CK+ KI KA + V  M   G  PD
Sbjct: 316 LCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPD 375

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTL+ A C+ G ++ A  ++  +  KG     I+ NT++  L    K  EA  LL+
Sbjct: 376 IVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLD 435

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + +G   D ++Y T+ +G  R+++   A++ + ++++  I P+   YNA++ GL +  
Sbjct: 436 EMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRR 495

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           +T  AID+   ++ SG +P+E+T+  ++ G   EG V++A +   ++  +
Sbjct: 496 ETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSR 545



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 196/410 (47%), Gaps = 32/410 (7%)

Query: 133 EAFKLIDELDEHGIKPNAVTH----NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           +A +L+D L   G+ P +         +IK  C  G+   A +++         PD + Y
Sbjct: 85  DALRLVDSL--AGLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----AASGPDVMVY 137

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N ++   C AG ++ A R++  M    ++ +  T NT++  LC   +   A  +L    +
Sbjct: 138 NAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   D V+Y  L+    +     +A+KL DEM ++   P   TYN ++ G+ Q G+ E 
Sbjct: 195 RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVED 254

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A++ L  L   G  P+  ++N ++ G  +  + E A +   +M  K   P++VT N+L+S
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 314

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LCR G++E A++        G   +S++YN L+ + CK++++  A   +  M  +   P
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP 374

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  +Y  + TAL  +G ++ A +            HQ+     S       P  ISY+  
Sbjct: 375 DIVSYNTLLTALCRNGEVDVAIELL----------HQLKDKGCS-------PVLISYNTV 417

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           I+     G+ K+AL++ +E   KG+  +  TY  + +GL  R   I +AV
Sbjct: 418 IDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLC-REDRIEEAV 466


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 271/525 (51%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+V+Y +++  L K G+L E  +L + M+ +  VP    YN ++ GY   G  ++A
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 338

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++ + +   +P V ++N ++        ++EA  L + M+     P+  TYN +I+ 
Sbjct: 339 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDM 397

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA++++DE++   + PN +T NIM+   CK  K+++A KI  +  + G +PD
Sbjct: 398 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 457

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           CVTY +LID   K G ++EA+R+ + M   G   N +   +++       + ++ + +  
Sbjct: 458 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 517

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG   D     T +   F+  +  +   ++++++    +P   +Y+ +I GL+++G
Sbjct: 518 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 577

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +  ++ + + Q G   D   +N ++ GFC  G+V KA +   +M EK  +P + T  
Sbjct: 578 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 637

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL +   L++A   F     KG  ++ V Y++LI    K  R+++A+ +L EM +K
Sbjct: 638 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 697

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+ YT+ ++  ALV++  + EA      M E              K P    P++ +
Sbjct: 698 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM-------------KCP----PNTYT 740

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           YS  IN  C   +Y  A   +++ +++G+  N  TY  +++GL K
Sbjct: 741 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 785



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 270/525 (51%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V++N+IL  L KK K++E   L   MKK    PN +TYNI++   C  G ++EA
Sbjct: 349 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEA 407

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++D M      P++ T N++++  C A  LEEA+++ +        PD VTY +LI+ 
Sbjct: 408 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  EA++L +++ + G   N V +  +I+ +   G+ +   KI + +   G  PD
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG +E+   + + +   G   +  + + ++H L    +  E   + +
Sbjct: 528 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 587

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G+ LD  +Y  ++ G+ +  K ++A ++ +EMKE+ + P+  TY A++ GL++  
Sbjct: 588 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 647

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     +M++K   P++ T N
Sbjct: 648 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 707

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        ++ TY+ LI+ LC+ ++   AF    +M+++
Sbjct: 708 SLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 767

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY  + + L + G + +A          G I                 P + S
Sbjct: 768 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI-----------------PDAAS 810

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  I    +  R  +A Q+FEETR +G  IN  + ++L++ L K
Sbjct: 811 FNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNK 855



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 234/492 (47%), Gaps = 35/492 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++ TYN I+D L   G++ E   +L +M+   L PN  T NI+V   CK   L+EA ++
Sbjct: 386 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 445

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  +Q    PD  TY  LI+G    G ++EA+RL ++M       + V Y +LI  FF 
Sbjct: 446 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 505

Query: 128 SGRSMEAFKLIDELDEHGIKPNAV-----------------------------------T 152
            GR  +  K+  EL   G KP+                                     +
Sbjct: 506 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 565

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           ++I+I    K G+  +   I   M++ GF+ D   YN ++D  CK+G + +A+ +++ M 
Sbjct: 566 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 625

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            K ++    T   I+  L    +LDEAYML   A  +G  L+ V Y +LI G+ +  + +
Sbjct: 626 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 685

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  + +EM ++ + P+ +T+N+++  L ++ +  +A+     + +    P+  T++ +I
Sbjct: 686 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 745

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G C   +  KA  F   M ++   P++VT   ++SGL + G +  A   F  +   G  
Sbjct: 746 NGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 805

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D+ ++N LI  +    R  +A+ +  E   +    +  +  ++  AL +S  LE+A   
Sbjct: 806 PDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIV 865

Query: 453 TSIMVETGKINH 464
            +++ E  K  H
Sbjct: 866 GAVLREIAKSQH 877



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 250/549 (45%), Gaps = 38/549 (6%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL-VPNRTTYNILVSGYCKLGWLKEAM 65
           LP +  Y+ +L   F    L  +  +L +M   G  +PN+   + L +   +   L +A+
Sbjct: 109 LPAD-AYHAVLP--FLHHDLAALEKVLEEMAVLGYGLPNQACAH-LAAALVRARRLDDAV 164

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             V +M + K  P    Y +LI     A   E A  L ++M+ +     V  + TL+   
Sbjct: 165 LAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRAL 224

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G+  +A  L+DE+    ++P+ V +N+ I  + K G +D A K    ++  G  PD 
Sbjct: 225 AREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD 284

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V+Y ++I   CKAG + EA  +   M  +         NT++       + ++AY LL  
Sbjct: 285 VSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 344

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG     VS+ +++T   +  K + AL L++ MK +   P++ TYN +I  L   G+
Sbjct: 345 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGR 403

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A  +L+E+  + + P+  T N ++   C   ++E+A +      ++   PD VT   
Sbjct: 404 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GL ++G +++A + F   +  G   + V Y +LI +     R ED   +  E+  + 
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 523

Query: 426 LGPD-----RYTYAAIHTALVESGRL--EEAQKFT--------SIMV----------ETG 460
             PD      Y         VE GR+  E+ + +         SI++          ET 
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 583

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
            I H + Q   +     +D  + +Y+  ++  C  G+   A +I EE ++K +    +TY
Sbjct: 584 NIFHAMKQQGFA-----LD--ARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATY 636

Query: 521 MNLMNGLIK 529
             +++GL K
Sbjct: 637 GAIVDGLAK 645



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 158/360 (43%), Gaps = 18/360 (5%)

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           K++  M   G+         L  A  +A  +++A   + VM R   +        ++  L
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGAL 189

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
              ++ + A  LL    + GY +    + TL+    R+ +   AL L DE+K   + P  
Sbjct: 190 AEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDI 249

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             YN  I    ++G  + A    +EL   G+ PD+ ++ ++I   C  G++ +A +   +
Sbjct: 250 VLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQ 309

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M  +   P     N ++ G    G  E A K       +G     V++N++++ L K+R+
Sbjct: 310 MEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 369

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +++A  L  E+ +K   P+  TY  I   L   GR+EEA +    M       H  + PN
Sbjct: 370 VDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM------EHASLFPN 422

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                       ++ +  ++  C   + ++A +IFE   Q+G   +  TY +L++GL K+
Sbjct: 423 L-----------LTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 471



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 123/300 (41%), Gaps = 59/300 (19%)

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           EK L+E  +L       GY L   +   L     R  + + A+     M+  +  P+   
Sbjct: 129 EKVLEEMAVL-------GYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSA 181

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  +I  L+++ + E+A+++L ++ + G       F T++     EGQV  AL   +++ 
Sbjct: 182 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK 241

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
               +PDI                                   V YN  I    K   ++
Sbjct: 242 GSCLEPDI-----------------------------------VLYNVCIDCFGKAGNVD 266

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A+    E++ + L PD  +Y ++   L ++GRL EA++  + M                
Sbjct: 267 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM---------------- 310

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              E   P + +Y+  I  + S GR++DA ++ E  R++G   +  ++ +++  L K+RK
Sbjct: 311 -EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 369


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 205/368 (55%), Gaps = 2/368 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ VTYNT++     +G++    D++ +M+++G + PN+ TY  ++SG+CK+G + EA++
Sbjct: 70  PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V D ++T+ +  P+   YN LI G+C+ G L+ A   R  M    +   V TYN L++  
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F  GR  EA++L++E+   G+ P+  T+NI+I  +CKEG + KA +I  NM   G     
Sbjct: 190 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY +LI A  K G ++E  ++ D   R+G++ + +  N ++++      +D A+ ++  
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+    D+V+Y TL+ G     + + A KL DEM +R I P   TYN +I G S  G 
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 369

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ + NE++  G  P   T+N +I G C  GQ + A     +MVE    PD  T   
Sbjct: 370 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 429

Query: 366 LLSGLCRE 373
           L+ GL  E
Sbjct: 430 LIEGLTTE 437



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 224/406 (55%), Gaps = 8/406 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L   GK     +LL  M +    PN  TYN +++G+C  G ++ A+ ++  M
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESG 129
            +   + P+ +TY  +I+GWC  G ++EA ++  EM +  ++ P+ V YN LI  + + G
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   A    D + E G+     T+N+++     +G+  +A ++V  M   G +PD  TYN
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+ +CK GN+++A  + + M R+G++   +T  ++++ L  + ++ E   L + A +R
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V Y  LI  +      +RA ++  EM++++I P   TYN ++ GL   G+ ++A
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +++E+ + G+ PD  T+NT+I G+  +G V+ AL+  N+M+ K F P ++T N L+ G
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC--KERRLED 413
           LC+ G  + A    +  +  G   D  TY +LI  L    ER ++D
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDD 444



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 222/411 (54%), Gaps = 6/411 (1%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L +DM +  L    TT+NI++   C  G    A+ ++  M +    P+  TYN +I G+C
Sbjct: 28  LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 83

Query: 92  NAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPN 149
           + G ++ A  + +EM E   + P+  TY T+I+ + + GR  EA K+ DE+   G +KP 
Sbjct: 84  SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           AV +N +I  YC +GK+D A      M E G +    TYN L+ A    G   EA+ +++
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            MG KGL  +  T N +++  C E  + +A  +  + S+RG     V+Y +LI    +  
Sbjct: 204 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 263

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +     KL+DE   R I P    YNA+I   S SG  ++A +++ E+ +  + PD+ T+N
Sbjct: 264 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 323

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G C  G+V++A +  ++M ++  +PD+VT N L+SG   +G ++ AL+     + K
Sbjct: 324 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 383

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           G     +TYN LI  LCK  + +DA  ++ EM E  + PD  TY ++   L
Sbjct: 384 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 200/381 (52%), Gaps = 6/381 (1%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C+AG    A  L ++M      P+ VTYNT+I  F   GR   A  ++ E+
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 142 DEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDANCKAG 199
            E G I PN  T+  +I  +CK G++D+A K+   M   G   P+ V YN LI   C  G
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A    D M  +G+ M   T N ++H L  + +  EAY L+     +G   D  +Y 
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI G+ ++    +AL++++ M  R +  +  TY ++I+ LS+ G+ ++   + +E ++ 
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD   +N +I+   + G +++A +   +M +K   PD VT N L+ GLC  G +++A
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K       +G   D VTYNTLIS    +  ++DA  + +EM  K   P   TY A+   
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L ++G+ ++A+     MVE G
Sbjct: 399 LCKNGQGDDAENMVKEMVENG 419



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 205/426 (48%), Gaps = 27/426 (6%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M+SL L     + + L++       S  AF L  ++    +     T NIM++  C  GK
Sbjct: 1   MKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 56

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG-RKGLKMNTITLN 224
             +A +++R M      P+ VTYNT+I   C  G ++ A  +M  M  R G+  N  T  
Sbjct: 57  PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 112

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDE-VSYGTLITGYFRDEKANRALKLWDEMKE 283
           T++   C   ++DEA  + +    +G    E V Y  LI GY    K + AL   D M E
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 172

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R +  +  TYN ++  L   G+  +A +++ E+   G+ PD  T+N +I+G C EG V+K
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 232

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL+    M  +  +  +VT   L+  L ++G +++  K F   + +G   D V YN LI+
Sbjct: 233 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 292

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           S      ++ AF ++ EME+K++ PD  TY  +   L   GR++EA+K    M + G   
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG--- 349

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P  ++Y+  I+ +  +G  KDAL+I  E   KG      TY  L
Sbjct: 350 --------------IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 395

Query: 524 MNGLIK 529
           + GL K
Sbjct: 396 IQGLCK 401



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 140/275 (50%), Gaps = 37/275 (13%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            TYN ++ ALF  G+  E  +L+ +M  +GL P+  TYNIL++G+CK G +K+A+ + + 
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239

Query: 71  MTQN---------KSL--------------------------PDVWTYNMLINGWCNAGM 95
           M++           SL                          PD+  YN LIN    +G 
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           ++ AF +  EME  ++ PD VTYNTL+      GR  EA KLIDE+ + GI+P+ VT+N 
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y  +G +  A +I   M   GF+P  +TYN LI   CK G  ++A  M+  M   G
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419

Query: 216 LKMNTITLNTILHTLCC--EKKLDEAYMLLNSASK 248
           +  +  T  +++  L    E+ +D+  +    A+K
Sbjct: 420 ITPDDSTYISLIEGLTTEDERAIDDERLAAADAAK 454



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 23/259 (8%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L+ +M   ++   T T+N M+  L  +GK  +A+++L ++ +    P+  T+NT+I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 334 GFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           GFCS G+V+ AL    +M E+    P+  T   ++SG C+ G +++A+K F   + KG+ 
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 393 -VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++V YN LI   C + +L+ A      M E+ +     TY  +  AL   GR  EA +
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G                 + P   +Y+  IN HC +G  K AL+IFE   ++
Sbjct: 201 LVEEMGGKG-----------------LAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 243

Query: 512 GIAINKSTYMNLMNGLIKR 530
           G+     TY +L+  L K+
Sbjct: 244 GVRATVVTYTSLIYALSKK 262


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 242/456 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VT+N +++     G++     + + + K G  P   T+N L++G C  G LKEA
Sbjct: 89  GITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEA 148

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   D +       D  +Y  LING C  G    A ++ K++E   +  DVV YN +IN 
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A++L  E+    I P+ VT N +I  +C  G++ +A  +   M     +PD
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T++ L+DA CK GN+  A  M+ VM ++G+  + +T ++++   C   ++++A  + +
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS 328

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S+ G      SY  +I G  + +  + AL L+ EM  + I P T TYN++I GL + G
Sbjct: 329 TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLG 388

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A  +++E+  +G+  D  T+N++I   C    ++KA+    K+ ++  +P + T N
Sbjct: 389 RISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYN 448

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ GLC+ G L+ A   F+  ++KG +V++ TYN +I+ LCKE    +A  LLS+ME  
Sbjct: 449 ILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN 508

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            + PD  TY  I  AL      E+A+K    M+  G
Sbjct: 509 GIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 230/461 (49%), Gaps = 19/461 (4%)

Query: 71  MTQNKSLPDVWTYNMLINGW--CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           M + +  P +  +N ++      N      A  L  ++E   + P +VT+N L+N +   
Sbjct: 48  MLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHL 107

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    AF +  ++ + G  P  +T N +I   C  GK+ +A     ++   GF  D V+Y
Sbjct: 108 GEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSY 167

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            TLI+  CK G    A +M+  +  K +  + +  N I+++LC +K + +AY L +    
Sbjct: 168 RTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMIT 227

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +    D V++ +LI G+    +   A  L+ EM  + I P  +T++ ++  L + G   +
Sbjct: 228 KRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITR 287

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A +ML  +++ G+IPD  T+++++ G+C   +V KA    + M      P   + NI+++
Sbjct: 288 AKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMIN 347

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL +  ++++AL  F+    KG A D+VTYN+LI  LCK  R+  A+ L+ EM    +  
Sbjct: 348 GLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPA 407

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  TY ++   L ++  +++A           KI  Q +QP           S  +Y+  
Sbjct: 408 DILTYNSLIDVLCKNHHIDKAIALVK------KIKDQGIQP-----------SMYTYNIL 450

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+  C  GR K+A  +F++   KG ++N  TY  ++NGL K
Sbjct: 451 IDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCK 491



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 160/280 (57%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T++ ++DAL K G +   +++L+ M KQG++P+  TY+ L+ GYC +  + +A  V
Sbjct: 267 PDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHV 326

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M++    P   +YN++ING     M++EA  L KEM    + PD VTYN+LI+   +
Sbjct: 327 FSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCK 386

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR   A++L+DE+  +GI  + +T+N +I   CK   IDKA  +V+ +++ G  P   T
Sbjct: 387 LGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYT 446

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LID  CK G ++ A  +   +  KG  +N  T N +++ LC E   +EA +LL+   
Sbjct: 447 YNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKME 506

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             G   D V+Y T+I   FR ++  +A KL  EM  R ++
Sbjct: 507 NNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 164/315 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT+N+++      G+L E   L  +M  + + P+  T++ILV   CK G +  A  +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M +   +PDV TY+ L++G+C    + +A  +   M  L + P   +YN +IN   +
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                EA  L  E+   GI P+ VT+N +I   CK G+I  A ++V  M  NG   D +T
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LID  CK  ++++A  ++  +  +G++ +  T N ++  LC   +L  A  +     
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +GY ++  +Y  +I G  ++   N A  L  +M+   I+P   TY  +I  L +  + E
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENE 531

Query: 308 QAIDMLNELLQSGMI 322
           +A  +L E++  G++
Sbjct: 532 KAEKLLREMIIRGLL 546



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 54/388 (13%)

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  +   +E  G +P  VT+N L++  C  G M  AF +   + + G    TIT NT+++
Sbjct: 78  AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLIN 137

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            +C   KL EA    +     G++LD+VSY TLI                          
Sbjct: 138 GICLNGKLKEALHFHDHVIALGFHLDQVSYRTLIN------------------------- 172

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
                     GL + G+T  A+ ML ++    +  D   +N II+  C +  V  A Q +
Sbjct: 173 ----------GLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLY 222

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M+ K   PD+VT N L+ G C  G L++A   F   +LK    D  T++ L+ +LCK+
Sbjct: 223 SEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKD 282

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH---- 464
             +  A  +L+ M ++ + PD  TY+++         + +A+   S M   G   H    
Sbjct: 283 GNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSY 342

Query: 465 ----------QVVQPNTSKTPE----EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                     ++V    S   E     I P +++Y+  I+  C  GR   A Q+ +E   
Sbjct: 343 NIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHN 402

Query: 511 KGIAINKSTYMNLMNGLIKRRKSISKAV 538
            GI  +  TY +L++ L K    I KA+
Sbjct: 403 NGIPADILTYNSLIDVLCKNHH-IDKAI 429



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 138/249 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY++++D      ++N+ + + S M + G+ P+  +YNI+++G  K+  + EA
Sbjct: 299 GVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEA 358

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M      PD  TYN LI+G C  G +  A++L  EM +  +  D++TYN+LI+ 
Sbjct: 359 LSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDV 418

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    +A  L+ ++ + GI+P+  T+NI+I   CK G++  A  + +++   G+S +
Sbjct: 419 LCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVN 478

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN +I+  CK G   EA  ++  M   G+  + +T  TI+  L  + + ++A  LL 
Sbjct: 479 AWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLR 538

Query: 245 SASKRGYYL 253
               RG  L
Sbjct: 539 EMIIRGLLL 547



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 116/216 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   +YN +++ L K   ++E   L  +M  +G+ P+  TYN L+ G CKLG 
Sbjct: 330 MSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGR 389

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A ++VD M  N    D+ TYN LI+  C    +++A  L K+++   + P + TYN 
Sbjct: 390 ISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR   A  +  +L   G   NA T+NIMI   CKEG  ++A  ++  ME NG
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             PD VTY T+I A  +    E+A +++  M  +GL
Sbjct: 510 IIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 248/523 (47%), Gaps = 17/523 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V+ NTI+    K G ++  R     M K GL+ +  +YNIL+ G C  G + EA+  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M ++   PDV TYN L  G+   G++  A ++ ++M    L PD+VTY TLI    +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL  E    G K N + +N+++   CK G+I++A  +   ME     PD + 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI   CK G ++ A+++ + M  K    +      +L  L     + EA    ++ +
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     D V Y  +I GY R +    A++L+ +M ER I PS  T+N +I G  + G   
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  ML  +   G++P   T+ T+++ +C  G +++   F ++M   +  P  VT  +L+
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCR+  + ++L+       KG   DSVTYNT+I   CK + +  A  L + M      
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P + TY  +  AL   G L++  +                    S     I     +Y  
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMV-----------------VSIEDRNITLKKXTYMT 731

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I  HC++G+   AL  F +   KG  I+   Y  ++N L KR
Sbjct: 732 IIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKR 774



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 221/460 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VTYNT+       G ++  R ++  M  QGL P+  TY  L+ G+C++G 
Sbjct: 332 MEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGN 391

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+++           +V  YNML++  C  G +EEA  L  EME+L+L PD + Y+ 
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A++L +++      P+      ++    K G I +A           
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V YN +ID   +   + EA ++   M  +G+  + +T NT+++  C    L EA 
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L     +G     V+Y TL+  Y              EM+   ++P+  TY  +I GL
Sbjct: 572 KMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGL 631

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K  +++ +L  +   G++PD  T+NTII  FC   ++ KALQ +N M+  +  P  
Sbjct: 632 CRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQ 691

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +L++ LC  G L+   +   S   +   +   TY T+I + C + ++  A G  ++
Sbjct: 692 VTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQ 751

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  K        Y+A+   L + G + EA+ F  +M+  G
Sbjct: 752 MLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEG 791



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 198/444 (44%), Gaps = 70/444 (15%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + YN +L  L K G++ E   L  +M+   L P+   Y+IL+ G CK G+++ A ++ + 
Sbjct: 412 IFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQ 471

Query: 71  MTQNKSLP-------------------------DVWT----------YNMLINGWCNAGM 95
           M   +  P                         D WT          YN++I+G+     
Sbjct: 472 MRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDG 531

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + EA +L  +M    + P VVT+NTLIN F   G  MEA K+++ +   G+ P+ VT+  
Sbjct: 532 IAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTT 591

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++  YC+ G + +    +  ME N   P  VTY  LI   C+   M E+ ++++ M  KG
Sbjct: 592 LMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKG 651

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L  +++T NTI+   C                                   + ++  +AL
Sbjct: 652 LLPDSVTYNTIIQCFC-----------------------------------KGKEITKAL 676

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L++ M      P+  TY  +I  L   G  +    M+  +    +   + T+ TII   
Sbjct: 677 QLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAH 736

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C++GQV KAL + N+M+ K F   I   + +++ LC+ G++ +A  FF   + +G   D 
Sbjct: 737 CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDP 796

Query: 396 VTYNTLISSLCKERRLEDAFGLLS 419
               T++++  ++      F  L+
Sbjct: 797 EICKTVLNAFHQQGNNSSVFEFLA 820



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 236/533 (44%), Gaps = 46/533 (8%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM- 71
           +  I DALF   K+        D+  Q  VP   TYN L+            MR  D+M 
Sbjct: 183 HEMIHDALFVIAKMK-------DLNFQASVP---TYNSLLHN----------MRHTDIMW 222

Query: 72  -----TQNKSLPDV-WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                 +    P    T ++LI+G C    LE+A     +   + + P +V+ NT++++F
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKF 281

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G    A      + ++G+  ++ ++NI++   C  G +D+A     +ME++G  PD 
Sbjct: 282 CKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYNTL       G M  A +++  M  +GL  + +T  T++   C    ++EA  L   
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              RG+ L+ + Y  L++   +  +   AL L+DEM+  ++ P    Y+ +I GL + G 
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A  +  ++      P       ++ G    G + +A  + +         D+V  NI
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ G  R   + +A++ +   I +G     VT+NTLI+  C+   L +A  +L  +  K 
Sbjct: 522 MIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P   TY  +  A  E G ++E   F   M                     + P+ ++Y
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM-----------------EANAVVPTHVTY 624

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +  I   C Q +  ++LQ+ E    KG+  +  TY  ++    K  K I+KA+
Sbjct: 625 TVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK-GKEITKAL 676



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 231/524 (44%), Gaps = 24/524 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D+V  N I+D     G  + + DLL + K +    N   +++L   Y +   + +A+ V+
Sbjct: 137 DSVIKNLIVDQ--GLGSASIICDLLLE-KFRNWDSNGLVWDMLAFAYSRHEMIHDALFVI 193

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M        V TYN L++   +  ++ + +    E++         T + LI+   E 
Sbjct: 194 AKMKDLNFQASVPTYNSLLHNMRHTDIMWDVY---NEIKVSGAPQSECTTSILIHGLCEQ 250

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +  +A   + + ++  + P+ V+ N ++  +CK G ID A      M +NG   D  +Y
Sbjct: 251 SKLEDAISFLHDSNK-VVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSY 309

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+   C AG+M+EA    D M + G++ + +T NT+         +  A  ++     
Sbjct: 310 NILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLL 369

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D V+Y TLI G+ +      ALKL  E   R    +   YN ++  L + G+ E+
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+ + +E+    + PD   ++ +IHG C EG V++A Q + +M  K   P       +L 
Sbjct: 430 ALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL + G + +A  +F +W       D V YN +I    +   + +A  L  +M E+ + P
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
              T+  +       G L EA+K   ++   G +                 PS ++Y+  
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLV-----------------PSVVTYTTL 592

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +N +C  G  ++      E     +     TY  L+ GL ++ K
Sbjct: 593 MNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 230/456 (50%), Gaps = 1/456 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+ T+++   ++G +     L + M + G  P   T N+L++GYCKLG + +A+  
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +     +   PD  T++  +NG C  G ++ A ++   M      PDV TY+T+IN    
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   EA  +++++ + G  P+  T N +I   C E ++++A  + R +   G SP+  T
Sbjct: 349 NGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYT 408

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N LI+A CK G+   A R+ + M   G   + +T N ++  LC   KL +A  LL    
Sbjct: 409 FNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G     V+Y T+I G  +  +   A +++D+M    I  +  T+N +I GL  + + +
Sbjct: 469 VSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERID 528

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A +++++++  G+ P+  T+N+I+  +C +G + KA      M    F+ D+VT   L+
Sbjct: 529 DAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLI 588

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GLC+    + ALK  R   +KG       YN +I SL +     DA  L  EM E    
Sbjct: 589 NGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGP 648

Query: 428 PDRYTYAAIHTALVE-SGRLEEAQKFTSIMVETGKI 462
           PD +TY  +   L    G ++EA  F   M + G I
Sbjct: 649 PDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFI 684



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 256/539 (47%), Gaps = 17/539 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG   +   YN +L  L +  K+  +    ++M  QG+ P+  T+N ++   C+   
Sbjct: 152 LDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQ 211

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+ +++ M+     PD  T+  L+ G+   G +E A RL+  M  +   P  VT N 
Sbjct: 212 ARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNV 271

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + + GR  +A   I +    G +P+ VT +  +   C+ G +D A K++  M + G
Sbjct: 272 LINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY+T+I+  C  G +EEA  +++ M   G   +T T NT++  LC E +L+EA 
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    + +G   +  ++  LI    +    + A++L++EMK     P   TYN +I  L
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SGK  +A+D+L E+  SG      T+NTII G C   ++E+A +  ++M       + 
Sbjct: 452 CSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNA 511

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L+ GLC    ++ A +     I +G   ++VTYN++++  CK+  +  A  +L  
Sbjct: 512 ITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQT 571

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M       D  TYA +   L ++ R + A K    M   G                 + P
Sbjct: 572 MTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG-----------------MKP 614

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +  +Y+  I         +DAL +F E  + G   +  TY  +  GL +    I +A D
Sbjct: 615 TPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFD 673



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 189/352 (53%), Gaps = 1/352 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLPD  T+NT++ AL  + +L E  DL  ++  +GL PN  T+NIL++  CK+G    A
Sbjct: 366 GCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLA 425

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+ + M  +   PD  TYN+LI+  C++G L +A  L KEME        VTYNT+I+ 
Sbjct: 426 VRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDG 485

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA ++ D++D  GI  NA+T N +I   C   +ID A ++V  M   G  P+
Sbjct: 486 LCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPN 545

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+++   CK GN+ +A  ++  M   G +++ +T  T+++ LC  ++   A  LL 
Sbjct: 546 NVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLR 605

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G      +Y  +I   FR      AL L+ EM E    P  FTY  +  GL + G
Sbjct: 606 GMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665

Query: 305 -KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
              ++A D L E+  +G IP+ ++F  +  G  + G  +  ++    +VEK+
Sbjct: 666 GPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKA 717



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 207/456 (45%), Gaps = 56/456 (12%)

Query: 133 EAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +AF L+ ++LD  G++ N   +N ++    +  KI         M   G  PD VT+NT+
Sbjct: 143 DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTV 202

Query: 192 IDANCKA-----------------------------------GNMEEAFRMMDVMGRKGL 216
           IDA C+A                                   G++E A R+   M   G 
Sbjct: 203 IDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGC 262

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
              ++T+N +++  C   ++ +A   +      G+  D V++ T + G  ++   + ALK
Sbjct: 263 SPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALK 322

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           +   M +    P  +TY+ +I  L  +G+ E+A  ++N+++ SG +PD TTFNT+I   C
Sbjct: 323 VLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALC 382

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           +E Q+E+AL    ++  K   P++ T NIL++ LC+ G    A++ F      G   D V
Sbjct: 383 TENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEV 442

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN LI +LC   +L  A  LL EME         TY  I   L +  R+EEA++    M
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502

Query: 457 VETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKINEHCSQGR 497
             TG I    +  NT                       E + P++++Y+  +  +C QG 
Sbjct: 503 DVTG-IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
              A  I +     G  ++  TY  L+NGL K R++
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRT 597



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 182/385 (47%), Gaps = 28/385 (7%)

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV----MGRKGLKMNTITLNTILHTLCCE 233
           ++G +P    Y  +I     AG    AF +M V    M R+G ++    + + + +    
Sbjct: 83  DDGLTPSRDVYEEIIRKLGTAG----AFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARL 138

Query: 234 KKLDEAYMLL-NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           +  D+A+ L+ N     G   +   Y  L+T      K       + EM  + I P   T
Sbjct: 139 QLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVT 198

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           +N +I  L ++ +   A+ ML E+    + PDETTF T++ GF  EG +E AL+   +M 
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMS 258

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           E    P  VT N+L++G C+ G +  AL + +  I  G   D VT++T ++ LC+   ++
Sbjct: 259 EMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVD 318

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG------KINHQV 466
            A  +L  M ++   PD YTY+ +   L  +G LEEA+   + MV++G        N  +
Sbjct: 319 HALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLI 378

Query: 467 VQPNTSKTPEE------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           V   T    EE            + P+  +++  IN  C  G    A+++FEE +  G  
Sbjct: 379 VALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCT 438

Query: 515 INKSTYMNLMNGLIKRRKSISKAVD 539
            ++ TY  L++ L    K ++KA+D
Sbjct: 439 PDEVTYNILIDNLCSSGK-LAKALD 462


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 239/442 (54%), Gaps = 1/442 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+NT+++ L  +GK+++   L+  M + G  P+  TYN +V+G C+ G    A  +
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +     DV+TY+ +I+  C  G ++ A  L KEME+  +   VVTYN+L+    +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  +   L+ ++    I PN +T N+++  + KEGK+ +A ++ + M   G SP+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL+D  C    + EA  M+D+M R     + +T  +++   C  K++D+   +  + S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KRG   + V+Y  L+ G+ +  K   A +L+ EM    ++P   TY  ++ GL  +GK E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  +L +S M      + TII G C  G+VE A      +  K  KP+++T  +++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SGLC++G L +A    R     G A +  TYNTLI +  ++  L  +  L+ EM+     
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 428 PDRYTYAAIHTALVESGRLEEA 449
            D  +   +   L+ SG L+++
Sbjct: 576 ADASSIKMVIDMLL-SGELDKS 596



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 237/449 (52%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +++   +  K      +L  + K G  P+ TT+N L++G C  G + +A+ +VD M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM 184

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N   PD+ TYN ++NG C +G    AF + ++ME   +  DV TY+T+I+     G  
Sbjct: 185 VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L  E++  GIK + VT+N +++  CK GK +    ++++M      P+ +T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D   K G ++EA  +   M  +G+  N IT NT++   C + +L EA  +L+   +   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V++ +LI GY   ++ +  +K++  + +R ++ +  TY+ ++ G  QSGK + A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E++  G++PD  T+  ++ G C  G++EKAL+    + +      IV    ++ G+C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G +E A   F S   KG   + +TY  +IS LCK+  L +A  LL +MEE    P+  
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +  A +  G L  + K    M   G
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCG 573



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 247/522 (47%), Gaps = 17/522 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V ++    A+ +  + N V D    ++  G+  N  T NI+++ +C+      A  
Sbjct: 85  LPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  + +    PD  T+N LING C  G + +A  L   M      PD+VTYN+++N   
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGIC 204

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            SG +  AF ++ +++E  +K +  T++ +I   C++G ID A  + + ME  G     V
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+L+   CKAG   +   ++  M  + +  N IT N +L     E KL EA  L    
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             RG   + ++Y TL+ GY    + + A  + D M   +  P   T+ ++I G     + 
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           +  + +   + + G++ +  T++ ++ GFC  G+++ A +   +MV     PD++T  IL
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLC  G LEKAL+ F         +  V Y T+I  +CK  ++EDA+ L   +  K +
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+  TY  + + L + G L EA      M E G                   P+  +Y+
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-----------------PNDCTYN 547

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
             I  H   G    + ++ EE +  G + + S+   +++ L+
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 239/475 (50%), Gaps = 18/475 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ +   M +++ LP +  ++   +               K++E   +  ++ T N +I
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F    ++  A+ ++ ++ + G +P+  T N +I   C EGK+ KA  +V  M ENG  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTYN++++  C++G+   AF M+  M  + +K +  T +TI+ +LC +  +D A  L
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                 +G     V+Y +L+ G  +  K N    L  +M  R+I+P+  T+N ++    +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK ++A ++  E++  G+ P+  T+NT++ G+C + ++ +A    + MV     PDIVT
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ G C    ++  +K FR+   +G   ++VTY+ L+   C+  +++ A  L  EM 
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              + PD  TY  +   L ++G+LE+A +    + ++                 ++D   
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-----------------KMDLGI 473

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           + Y+  I   C  G+ +DA  +F     KG+  N  TY  +++GL K + S+S+A
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEA 527



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 20/278 (7%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D K + A+ L+ EM   + +P    ++     ++++ +    +D   +L  +G+  +  T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            N +I+ FC   +   A     K+++  ++PD  T N L++GLC EG + KA+      +
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   D VTYN++++ +C+      AF +L +MEE+ +  D +TY+ I  +L   G ++
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 448 EAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEK 488
            A      M ET  I   VV  N+                        EI P+ I+++  
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++    +G+ ++A ++++E   +GI+ N  TY  LM+G
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/444 (32%), Positives = 223/444 (50%), Gaps = 1/444 (0%)

Query: 7   LPDNVTYNTILDALFKKGKL-NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP  + +  +L A+ K G+    V  L   M+  GL P+  T +IL+  +  L  +  A 
Sbjct: 91  LPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAF 150

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M +    PD  T+N LING C  G   +A     + E+    P V TY T+IN  
Sbjct: 151 SVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G +  A  L  +++E G +PN VT+NI+I   CK+  +++A  I   M+    SPD 
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI 270

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TYN+LI   C     +EA  +++ M    +  N  T N ++  +C E K+ EA  +  +
Sbjct: 271 FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT 330

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++ G   D V+Y +L+ GY    +   A KL+D M  +   P  F+YN +I G  ++ +
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A  + NE++  G+ PD   +NT+IHG C  G++ +A      M      PD+ T ++
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G C+EG L KA + FR         D   YN LI ++CK   L+DA  L SE+  + 
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510

Query: 426 LGPDRYTYAAIHTALVESGRLEEA 449
           L P+   Y  I   L + G L+EA
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEA 534



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 228/462 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  T + ++D      +++    + S M K GL P+  T+N L++G CK+G 
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGK 180

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+   D    +   P V+TY  +ING C  G    A  L K+ME     P+VVTYN 
Sbjct: 181 FAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +     EA  +   +    I P+  T+N +I+  C   +  +A  ++  M    
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  T+N L+DA CK G + EA  +   M   G++ + +T +++++      ++ EA 
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEAR 360

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L ++   +G   D  SY  LI GY + ++ + A +L++EM  + + P    YN +I GL
Sbjct: 361 KLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGL 420

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+  +A D+   +  +G +PD  T++ ++ GFC EG + KA +    M     KPDI
Sbjct: 421 CQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDI 480

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              NIL+  +C+ G L+ A K F    ++G   +   Y T+I++LCKE  L++A      
Sbjct: 481 AMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRN 540

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           ME     PD ++Y  I    ++      A +    M + G +
Sbjct: 541 MEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 238/491 (48%), Gaps = 18/491 (3%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAF 100
           +P    +  L+S   K+G    A+  +    +   L PD++T ++LI+ + +   ++ AF
Sbjct: 91  LPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAF 150

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
            +  +M  L L PD VT+NTLIN   + G+  +A +  D+ +  G +P   T+  +I   
Sbjct: 151 SVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK G+   A  + + MEE G  P+ VTYN LID+ CK   + EA  +   M  K +  + 
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI 270

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T N+++  LC  ++  EA  LLN  +      +  ++  L+    ++ K + A  ++  
Sbjct: 271 FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT 330

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M E  + P   TY+++++G S   +  +A  + + ++  G  PD  ++N +I G+C   +
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           +++A Q  N+M+ +   PD V  N L+ GLC+ G L +A   F++    G   D  TY+ 
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+   CKE  L  AF L   M+   L PD   Y  +  A+ + G L++A+K  S +   G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
            +                 P+   Y+  IN  C +G   +AL+ F      G   ++ +Y
Sbjct: 511 LL-----------------PNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSY 553

Query: 521 MNLMNGLIKRR 531
             ++ G ++ +
Sbjct: 554 NVIIRGFLQYK 564



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 21/302 (6%)

Query: 235 KLDEAYMLLNSASKR----GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           K+ + Y  + S SK+    G   D  +   LI  +   ++ + A  ++ +M +  + P  
Sbjct: 106 KMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDA 165

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            T+N +I GL + GK  QA++  ++   SG  P   T+ TII+G C  G+   A     K
Sbjct: 166 VTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKK 225

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M E   +P++VT NIL+  LC++ ++ +AL  F     K  + D  TYN+LI  LC  RR
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
            ++A  LL+EM    + P+ +T+  +  A+ + G++ EAQ     M E G          
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG---------- 335

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  ++P  ++YS  +  +  +    +A ++F+    KG   +  +Y  L+ G  K 
Sbjct: 336 -------VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388

Query: 531 RK 532
           ++
Sbjct: 389 KR 390



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 103/183 (56%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PDNV YNT++  L + G+L E +DL  +M   G +P+  TY++L+ G+CK G+L +A
Sbjct: 405 GLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKA 464

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+  +M      PD+  YN+LI+  C  G L++A +L  E+    LLP+V  Y T+IN 
Sbjct: 465 FRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA +    ++  G  P+  ++N++I+ + +     +A +++  M + GF  +
Sbjct: 525 LCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584

Query: 185 CVT 187
             T
Sbjct: 585 AGT 587



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 74/152 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD  TY+ +LD   K+G L +   L   M+   L P+   YNIL+   CK G 
Sbjct: 436 MHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN 495

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+A ++   +     LP+V  Y  +IN  C  G+L+EA    + ME     PD  +YN 
Sbjct: 496 LKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNV 555

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
           +I  F +      A +LI E+ + G    A T
Sbjct: 556 IIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 260/545 (47%), Gaps = 53/545 (9%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG +P+   YN ++++L K G L++   L S+M    L PN  TY+IL+  +C+ G L  
Sbjct: 359 FGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDV 418

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGML--------------------------- 96
           A+   D M Q+     V+ YN LING C  G L                           
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478

Query: 97  --------EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                   ++AF+L  +M    + P+V T+  LI+    + +  EA +L DEL E  IKP
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
             VT+N++I+ YC++GKIDKA +++ +M + G  PD  TY  LI   C  G + +A   +
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFI 598

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D + ++ +K+N +  + +LH  C E +L EA        +RG  +D V +  LI G  + 
Sbjct: 599 DDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQ 658

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                   L  +M ++ + P    Y +MI   S+ G  ++A +  + ++     P+  T+
Sbjct: 659 PDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTY 718

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             +++G C  G++++A     +M   +  P+ +T    L  L +EG +++A+    + +L
Sbjct: 719 TALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHA-ML 777

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG   ++VT+N +I   CK  R  +A  +LSEM E  + PD  TY+ +      SG +  
Sbjct: 778 KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           + K    M+  G                 ++P  ++Y+  I   C  G    A ++ ++ 
Sbjct: 838 SVKLWDTMLNRG-----------------LEPDLVAYNLLIYGCCVNGELDKAFELRDDM 880

Query: 509 RQKGI 513
            ++GI
Sbjct: 881 LRRGI 885



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 260/529 (49%), Gaps = 17/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G     VTYN ++  L K  +++E  ++   +  +GL  +  TY  LV G+C+L  
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  ++++D M +    P     + L++G    G +++A+ L  ++     +P++  YN 
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G   +A  L   +    ++PN +T++I+I  +C+ G++D A      M ++G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                  YN+LI+  CK G++  A  +   M  KG++    T  +++   C + ++ +A+
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N     G   +  ++  LI+G     K   A +L+DE+ ER+I P+  TYN +I G 
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK ++A ++L ++ Q G++PD  T+  +I G CS G+V KA  F + + +++ K + 
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  + LL G C+EG L +AL      I +G  +D V +  LI    K+   +  F LL +
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L PD   Y ++     + G  ++A +   +MV                  EE  P
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV-----------------TEECFP 713

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + ++Y+  +N  C  G    A  +F+  +   +  N  TY   ++ L K
Sbjct: 714 NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK 762



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 262/541 (48%), Gaps = 18/541 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+  T + +L+ L K  K   V +L  +    G+ P+  T + +V   C+L     A  
Sbjct: 187 LPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE 246

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M  N     + TYN+LI+G C    + EA  +++ +    L  DVVTY TL+  F 
Sbjct: 247 KIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC 306

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              +     +L+DE+ E G  P     + ++    K+GKID A ++V  +   GF P+  
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLF 366

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LI++ CK G++++A  +   M    L+ N IT + ++ + C   +LD A    +  
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G      +Y +LI G  +    + A  L+ EM  + + P+  T+ ++I G  +  + 
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  + N+++ +G+ P+  TF  +I G CS  ++ +A +  +++VE+  KP  VT N+L
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVL 546

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G CR+G ++KA +       KG   D+ TY  LIS LC   R+  A   + ++ ++ +
Sbjct: 547 IEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNV 606

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPEE----- 477
             +   Y+A+     + GRL EA   +  M++ G     + H V+     K P+      
Sbjct: 607 KLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFD 666

Query: 478 ---------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    + P ++ Y+  I+ +  +G +K A + ++    +    N  TY  LMNGL 
Sbjct: 667 LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLC 726

Query: 529 K 529
           K
Sbjct: 727 K 727



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 252/518 (48%), Gaps = 52/518 (10%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING----------W------C 91
           +N+LV  Y     + +A+ +V LM  N  LP+V T + L+NG          W       
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 92  NAGMLEEAFRLRKEMESLKLLPD-------------------VVTYNTLINRFFESGRSM 132
           NAG+  + +     + S+  L D                   +VTYN LI+   +  R  
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVS 277

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA ++   L   G+  + VT+  ++  +C+  + +   +++  M E GFSP     + L+
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G +++A+ ++  +GR G   N    N ++++LC    LD+A +L ++ S     
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + ++Y  LI  + R  + + A+  +D M +  I  + + YN++I G  + G    A  +
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
             E+   G+ P  TTF ++I G+C + QV+KA + +NKM++    P++ T   L+SGLC 
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              + +A + F   + +      VTYN LI   C++ +++ AF LL +M +K L PD YT
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYT 577

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  + + L  +GR+ +A+ F         ++ Q V+ N            + YS  ++ +
Sbjct: 578 YRPLISGLCSTGRVSKAKDFID------DLHKQNVKLN-----------EMCYSALLHGY 620

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           C +GR  +AL    E  Q+GI ++   +  L++G +K+
Sbjct: 621 CQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQ 658



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 209/426 (49%), Gaps = 36/426 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T+ +++    K  ++ +   L + M   G+ PN  T+  L+SG C    + EA
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D + + K  P   TYN+LI G+C  G +++AF L ++M    L+PD  TY  LI+ 
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK------------------- 165
              +GR  +A   ID+L +  +K N + ++ ++  YC+EG+                   
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 166 -------IDKACK---------IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
                  ID A K         ++++M + G  PD V Y ++ID   K G+ ++AF   D
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           +M  +    N +T   +++ LC   ++D A +L           + ++YG  +    ++ 
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               A+ L   M  + ++ +T T+N +I G  + G+  +A  +L+E+ ++G+ PD  T++
Sbjct: 765 NMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYS 823

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I+ +C  G V  +++  + M+ +  +PD+V  N+L+ G C  G L+KA +     + +
Sbjct: 824 TLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRR 883

Query: 390 GKAVDS 395
           G   D+
Sbjct: 884 GIIPDN 889



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 213/457 (46%), Gaps = 53/457 (11%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           +N+L+  +  +  + +A  + K M +  LLP+V T + L+N   +  + +  ++L DE  
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
             G++P+  T + +++  C+     +A + +R ME NGF    VTY              
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTY-------------- 263

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
                                N ++H LC   ++ EA  +  S   +G   D V+Y TL+
Sbjct: 264 ---------------------NVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLV 302

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ R ++    ++L DEM E    P+    + ++ GL + GK + A +++ ++ + G +
Sbjct: 303 LGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFV 362

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+   +N +I+  C  G ++KA   ++ M   + +P+ +T +IL+   CR G L+ A+ +
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   I  G       YN+LI+  CK   L  A  L  EM  K + P   T+ ++ +   +
Sbjct: 423 FDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCK 482

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             ++++A K  + M++ G                 I P+  +++  I+  CS  +  +A 
Sbjct: 483 DLQVQKAFKLYNKMIDNG-----------------ITPNVYTFTALISGLCSTNKMAEAS 525

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           ++F+E  ++ I   + TY  L+ G  +  K I KA +
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGK-IDKAFE 561



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 19/325 (5%)

Query: 224 NTILHTLCC-EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
           N++LHTL   E      +     + KR  +   + +  L+  Y    +   A+ +   M 
Sbjct: 123 NSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMF 182

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
              ++P   T +A++ GL +  K     ++ +E + +G+ PD  T + ++   C      
Sbjct: 183 ANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFL 242

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +A +    M    F   IVT N+L+ GLC+   + +A++  RS   KG A D VTY TL+
Sbjct: 243 RAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLV 302

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT--------- 453
              C+ ++ E    L+ EM E    P     + +   L + G++++A +           
Sbjct: 303 LGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFV 362

Query: 454 -SIMVETGKINHQVVQPNTSKTP--------EEIDPSSISYSEKINEHCSQGRYKDALQI 504
            ++ V    IN      +  K            + P+ I+YS  I+  C  GR   A+  
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422

Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
           F+   Q GI      Y +L+NG  K
Sbjct: 423 FDRMIQDGIGETVYAYNSLINGQCK 447


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 245/471 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C P+   YN +++A   +G+ ++     + M ++G  P   T+N +++ +CK G 
Sbjct: 82  MPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGN 141

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++ D + +    P+   YN L+NG+     +++A  L +EM    + PD +T+N 
Sbjct: 142 VVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNI 201

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  ++ GR  +  +L+ ++   G+ P+    +I +   C  G++D+A + + +M E G
Sbjct: 202 LVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKG 261

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  + +N++I A  +AG  ++AF    +M   GL  +  T +++L  L    +L EA 
Sbjct: 262 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEAT 321

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+    ++G  ++ +++  L+  +F+      A  LW EM+ R I P    ++A I GL
Sbjct: 322 ELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGL 381

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G  E+A ++  E+L+ G+IP+   +N++I GFC  G++ +AL+    M  +   PDI
Sbjct: 382 SKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDI 441

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++ GLC++G +  A+  F      G + D +TYNTLI+  CK   + +A  L++ 
Sbjct: 442 FTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNR 501

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           M      PD  TY         S R+  A      +V  G ++     P T
Sbjct: 502 MYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFACPPT 552



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 252/538 (46%), Gaps = 18/538 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P       +   L + G    V  L  D+ ++G  P + T++ ++ G+C+ G 
Sbjct: 12  MREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGC 71

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     ++ LM +    P+ + YN++IN  C  G   +A      M      P VVT+NT
Sbjct: 72  IHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNT 131

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F + G  +EA KL D L E G  PNA+ +N ++  Y K  +ID+A  +   M + G
Sbjct: 132 VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKG 191

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD +T+N L+  + K G  E+  R++  +   GL  +    +  +  LC   +LDEA 
Sbjct: 192 IAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAM 251

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L    ++G     +++ ++I  Y +    ++A + +  M    + PS  T ++++ GL
Sbjct: 252 EFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGL 311

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S +G+ ++A +++ ++++ G+  +   F  ++  F   G V  A     +M  +   PD+
Sbjct: 312 SINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDV 371

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  +  + GL ++G++E+A   F   + KG   ++  YN+LI   CK  +L +A  L   
Sbjct: 372 VAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKV 431

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L PD +T   I   L + GR+  A      M +TG                 + P
Sbjct: 432 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTG-----------------LSP 474

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             I+Y+  IN +C      +A  +       G   + +TY   ++G    R+ +++AV
Sbjct: 475 DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR-MNRAV 531



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 234/502 (46%), Gaps = 17/502 (3%)

Query: 28  EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
           +  ++L  M++ G+ P+ +   IL     ++G      ++   + +    P  +T++ +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
            G+C  G +     L   M      P+   YN +IN     GR+ +A    + + E G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P  VT N +I  +CKEG + +A K+   ++E GFSP+ + YNTL++   K   +++A  +
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            + M +KG+  + IT N ++       + ++   LL   S  G   D   +   ++G   
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             + + A++   +M E+ + PS   +N++I   SQ+G  ++A +    ++  G+ P  +T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            ++++ G    G++++A +   +M+EK    + +   +LL    + G +  A   +    
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEME 363

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G   D V ++  I  L K+  +E+A+ +  EM  K L P+ + Y ++     + G+L 
Sbjct: 364 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLN 423

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA K   +M   G +                 P   + +  I   C QGR + A+ +F +
Sbjct: 424 EALKLEKVMRHRGLL-----------------PDIFTTNMIIGGLCKQGRMRSAINVFMD 466

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
             Q G++ +  TY  L+NG  K
Sbjct: 467 MHQTGLSPDIITYNTLINGYCK 488


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 248/529 (46%), Gaps = 78/529 (14%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ V+Y+T+++  F +G++++  +L  +M  +G+ P+  TY  ++ G CK      A 
Sbjct: 199 CPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAE 258

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M  N   P++ TYN LI+G+ + G  +E  R+ +EM +    P+  TY +L+N  
Sbjct: 259 AVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYL 318

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-------------------- 165
            ++GR  EA    D +   GIKP+  T+ IM+  Y  +G                     
Sbjct: 319 CKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNH 378

Query: 166 ---------------IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA------ 204
                          IDKA  I   M + G SPD V+Y  LIDA CK G +++A      
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438

Query: 205 ---------------------------------FRMMDVMGRKGLKMNTITLNTILHTLC 231
                                            F M++V    G+  N +  NTIL  LC
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV----GIHPNIVFFNTILCNLC 494

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
            E ++ E   L++S    G   D +SY TLI G+      + A KL + M    + P +F
Sbjct: 495 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           +YN ++ G  ++G+ + A     ++L +G+ P   T+NTI+HG     +  +A + +  M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           +    K DI T NI+L+GLC+   +++A+K F++   KG  ++ +T+N +I +L K  R 
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           EDA  L + +    L  +  TY  +   L+E G LEE     S M + G
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 246/529 (46%), Gaps = 21/529 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY+ ++    + G L         + K G   +    N L++G C    + EAM V
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 68  -VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL---PDVVTYNTLIN 123
            +  M +   +PD  +YN+L+ G CN    EEA  L   M   ++    P+VV+Y+T+IN
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF  G+  + + L  E+ + GI P+ VT+  +I   CK    D+A  + + M +NG  P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYN LI      G  +E  RM++ M   G K N  T  ++L+ LC   +  EA    
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S   +G      +YG ++ GY      +    L + M    I P+   +N      ++ 
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A+D+ N++ Q G+ PD  ++  +I   C  G+V+ A    N+M+ +   PDIV  
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + L+ GLC     EK  + F   +  G   + V +NT++ +LCKE R+ +   L+  +E 
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIEC 511

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD  +Y  +      +G ++EA K    MV  G                 + P S 
Sbjct: 512 MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG-----------------LKPDSF 554

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           SY+  ++ +C  GR   A   F +    GI     TY  +++GL + ++
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 266/543 (48%), Gaps = 22/543 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRD-LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           D++  N +L+ L    ++ E  D LL  M + G +P+  +YNIL+ G C     +EA+ +
Sbjct: 128 DHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALEL 187

Query: 68  VDLMTQNK---SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +M  ++     P+V +Y+ +ING+   G +++ + L  EM    + PDVVTY T+I+ 
Sbjct: 188 LHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDG 247

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++     A  +  ++ ++G+KPN  T+N +I  Y   GK  +  +++  M   G  P+
Sbjct: 248 LCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPN 307

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TY +L++  CK G   EA    D M  KG+K +  T   +LH    +  L E + LLN
Sbjct: 308 CCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLN 367

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +   +    + Y +    ++A+ ++++M+++ + P   +Y A+I  L + G
Sbjct: 368 LMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLG 427

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A    N+++  G+ PD   F+++++G C+  + EK  +   +M+     P+IV  N
Sbjct: 428 RVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFN 487

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +L  LC+EG + +  +   S    G   D ++YNTLI   C    +++A  LL  M   
Sbjct: 488 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV 547

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---------KINHQVVQPNTSKTP 475
            L PD ++Y  +     ++GR++ A      M+  G          I H + Q       
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607

Query: 476 EEIDPSSI---------SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           +E+  + I         +Y+  +N  C      +A+++F+    KG+ +N  T+  ++  
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667

Query: 527 LIK 529
           L+K
Sbjct: 668 LLK 670



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 240/488 (49%), Gaps = 28/488 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V +NTIL  L K+G++ E + L+  ++  G+ P+  +YN L+ G+C  G 
Sbjct: 474 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 533

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++++ M      PD ++YN L++G+C AG ++ A+   ++M S  + P VVTYNT
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++  F++ R  EA +L   +   G K +  T+NI++   CK   +D+A K+ +N+   G
Sbjct: 594 ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG 653

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + +T+N +I A  K G  E+A  +   +   GL  N +T   ++  L  E  L+E  
Sbjct: 654 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFD 713

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L ++  K G   +      L+         +RA     ++ ER       T + +I   
Sbjct: 714 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 773

Query: 301 S----------------------------QSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           S                            ++ + + A  +  E+L  G+ PD  T+NTI+
Sbjct: 774 SSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 833

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG    G+  +A + +  M+    + +I T NI+L+GLC+   +++A K F+S   KG  
Sbjct: 834 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 893

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           ++ +T+N +I +L K  R EDA  L + +    L PD  TY  +   L+E G LEE    
Sbjct: 894 LNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGL 953

Query: 453 TSIMVETG 460
              M ++G
Sbjct: 954 FLTMEKSG 961



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 258/543 (47%), Gaps = 17/543 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TY ++L+ L K G+  E R     M  +G+ P+ TTY I++ GY   G 
Sbjct: 299 MSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGA 358

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   +++LM  N   P+   +N+  + +   G++++A  +  +M    L PD V+Y  
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ P+ V  + ++   C   K +K  ++   M   G
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V +NT++   CK G + E  R++D +   G++ + I+ NT++   C    +DEA 
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 538

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   D  SY TL+ GY +  + + A   + +M    I P   TYN ++ GL
Sbjct: 539 KLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGL 598

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +  +A ++   ++ SG   D  T+N I++G C    V++A++    +  K  + +I
Sbjct: 599 FQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNI 658

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T NI++  L + G  E A+  F +    G   + VTY  ++ +L +E  LE+   L S 
Sbjct: 659 ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSA 718

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK-----TP 475
           ME+    P+     A+   L+  G +  A  + S + E    N  V    TS      + 
Sbjct: 719 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER---NFSVEASTTSMLISIFSS 775

Query: 476 EEIDPSSISYSEK---INEHCSQG------RYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           +E    + S  +K   +NE  S        R  DA  +F E   KG+  +  TY  +++G
Sbjct: 776 DEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 835

Query: 527 LIK 529
           L +
Sbjct: 836 LFQ 838



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 210/489 (42%), Gaps = 63/489 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G  PD ++YNT++D     G ++E   LL  M   GL P+  +YN L+ GYCK G 
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568

Query: 61  LKEAMRVVDLMTQNKSLP-----------------------------------DVWTYNM 85
           +  A      M  N   P                                   D++TYN+
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           ++NG C +  ++EA ++ + + S  L  +++T+N +I    + GR  +A  L   +  +G
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           +  N VT+ ++++   +EG +++   +   ME+NG +P+    N L+      G++  A 
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 748

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCE----------------------------KKLD 237
             +  +  +   +   T + ++     +                            +++D
Sbjct: 749 AYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRID 808

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +AY L      +G   D V+Y T++ G F+  + + A +L+  M   +   + +TYN ++
Sbjct: 809 DAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIL 868

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL +S   ++A  M   L   G+  +  TFN +I      G+ E A+     +      
Sbjct: 869 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV 928

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD+VT  ++   L  EG LE+    F +    G  +DS   N L+  L +   +  A   
Sbjct: 929 PDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAY 988

Query: 418 LSEMEEKKL 426
           LS+++EK  
Sbjct: 989 LSKLDEKNF 997



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 176/431 (40%), Gaps = 63/431 (14%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P  VTYNTIL  LF+  + +E ++L  +M   G   +  TYNI+++G CK   + EA
Sbjct: 583  GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEA 642

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY------ 118
            +++   +       ++ T+N++I      G  E+A  L   + +  L+ +VVTY      
Sbjct: 643  IKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVEN 702

Query: 119  -----------------------------NTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                                         N L+ R    G    A   + +LDE      
Sbjct: 703  LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 762

Query: 150  AVTHNIMIKWYC----------------------------KEGKIDKACKIVRNMEENGF 181
            A T +++I  +                             K  +ID A  + R M   G 
Sbjct: 763  ASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGL 822

Query: 182  SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            +PD VTYNT++    + G   EA  +   M     +MN  T N IL+ LC    +DEA+ 
Sbjct: 823  TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFK 882

Query: 242  LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            +  S   +G  L+ +++  +I    +  +   A+ L+  +    ++P   TY  +   L 
Sbjct: 883  MFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLI 942

Query: 302  QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            + G  E+   +   + +SG   D    N ++      G + +A  + +K+ EK+F  +  
Sbjct: 943  EEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAS 1002

Query: 362  TCNILLSGLCR 372
            T + L+S   R
Sbjct: 1003 TTSELISLFSR 1013



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 119/236 (50%), Gaps = 7/236 (2%)

Query: 19   ALFKKGK-LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL 77
            AL KK + +++   L  +M  +GL P+  TYN ++ G  + G   EA  +   M  +++ 
Sbjct: 799  ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858

Query: 78   PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
             +++TYN+++NG C +  ++EAF++ + + S  L  +++T+N +I    + GR  +A  L
Sbjct: 859  MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918

Query: 138  IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
               +  +G+ P+ VT+ ++ +   +EG +++   +   ME++G   D    N L+    +
Sbjct: 919  FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQ 978

Query: 198  AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC------CEKKLDEAYMLLNSAS 247
             G++  A   +  +  K   +   T + ++            K L E Y LLN A+
Sbjct: 979  RGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLLNEAN 1034



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 145/351 (41%), Gaps = 69/351 (19%)

Query: 1    MEGFGCLPDN------VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG 54
            M+ F  +P N      VTY  +++ L ++G L E   L S M+K G  PN    N LV  
Sbjct: 678  MDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 737

Query: 55   YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN---------------------- 92
                G +  A   +  + +     +  T +MLI+ + +                      
Sbjct: 738  LLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANS 797

Query: 93   ------AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR---------SM----- 132
                  A  +++A+ L +EM    L PDVVTYNT+++  F++GR         SM     
Sbjct: 798  SALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 857

Query: 133  ---------------------EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
                                 EAFK+   L   G++ N +T NIMI    K G+ + A  
Sbjct: 858  QMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 917

Query: 172  IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
            +   +  NG  PD VTY  + +   + G++EE   +   M + G  +++  LN ++  L 
Sbjct: 918  LFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLL 977

Query: 232  CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
                +  A   L+   ++ + L+  +   LI+ + R E  + A  L ++ +
Sbjct: 978  QRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYR 1028



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 8/212 (3%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD VTYNTIL  LF+ G+ +E ++L   M       N  TYNI+++G CK   + EA
Sbjct: 821  GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEA 880

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++   +       ++ T+N++I      G  E+A  L   + +  L+PDVVTY  +   
Sbjct: 881  FKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAEN 940

Query: 125  FFESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              E G S+E F  L   +++ G   ++   N +++   + G I +A   +  ++E  FS 
Sbjct: 941  LIEEG-SLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSL 999

Query: 184  DCVTYNTLIDANCK------AGNMEEAFRMMD 209
            +  T + LI    +      A ++ E +R+++
Sbjct: 1000 EASTTSELISLFSRGEYQHHAKSLPEKYRLLN 1031



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 122/269 (45%), Gaps = 31/269 (11%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQS-------GKTEQAIDMLNELLQSGMI---P 323
           ALKL+DE+       S   +N ++  +S+S        ++E  + + N +++   I   P
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           +  T++ +I  FC  G +E        +++  ++ D +  N LL+GLC    + +A+   
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152

Query: 384 RSWILK-GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL---GPDRYTYAAIHTA 439
              + + G   D+V+YN L+  LC E+R E+A  LL  M + ++    P+  +Y+ +   
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
               G++++       M++ G                 I P  ++Y+  I+  C    + 
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRG-----------------IPPDVVTYTTVIDGLCKAQLFD 255

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLI 528
            A  +F++    G+  N  TY  L++G +
Sbjct: 256 RAEAVFQQMIDNGVKPNIDTYNCLIHGYL 284


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 204/368 (55%), Gaps = 2/368 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ VTYNT++     +G++    D++ +M+++G + PN+ TY  ++SG+CK+G + EA++
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 571

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V D ++T+ +  P+   YN LI G+C+ G L+ A   R  M    +   V TYN L++  
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F  GR  EA++L++E+   G+ P+  T+NI+I  +CKEG + KA +I  NM   G     
Sbjct: 632 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY  LI A  K G ++E  ++ D   R+G++ + +  N ++++      +D A+ ++  
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+    D+V+Y TL+ G     + + A KL DEM ER I P   TYN +I G S  G 
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 811

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ + NE++  G  P   T+N +I G C  GQ + A     +MVE    PD  T   
Sbjct: 812 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871

Query: 366 LLSGLCRE 373
           L+ GL  E
Sbjct: 872 LIEGLTTE 879



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 223/406 (54%), Gaps = 8/406 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L   GK     +LL  M +    PN  TYN +++G+C  G ++ A+ ++  M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESG 129
            +   + P+ +TY  +I+GWC  G ++EA ++  EM +  ++ P+ V YN LI  + + G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   A    D + E G+     T+N+++     +G+  +A ++V  M   G +PD  TYN
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+ +CK GN+++A  + + M R+G++   +T   +++ L  + ++ E   L + A +R
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V Y  LI  +      +RA ++  EM++++I P   TYN ++ GL   G+ ++A
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +++E+ + G+ PD  T+NT+I G+  +G V+ AL+  N+M+ K F P ++T N L+ G
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC--KERRLED 413
           LC+ G  + A    +  +  G   D  TY +LI  L    ER ++D
Sbjct: 841 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDD 886



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 220/407 (54%), Gaps = 6/407 (1%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L +DM +  L    TT+NI++   C  G    A+ ++  M +    P+  TYN +I G+C
Sbjct: 470 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 525

Query: 92  NAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPN 149
           + G ++ A  + +EM E   + P+  TY T+I+ + + GR  EA K+ DE+   G +KP 
Sbjct: 526 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 585

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           AV +N +I  YC +GK+D A      M E G +    TYN L+ A    G   EA+ +++
Sbjct: 586 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 645

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            MG KGL  +  T N +++  C E  + +A  +  + S+RG     V+Y  LI    +  
Sbjct: 646 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 705

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +     KL+DE   R I P    YNA+I   S SG  ++A +++ E+ +  + PD+ T+N
Sbjct: 706 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 765

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G C  G+V++A +  ++M E+  +PD+VT N L+SG   +G ++ AL+     + K
Sbjct: 766 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 825

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           G     +TYN LI  LCK  + +DA  ++ EM E  + PD  TY ++
Sbjct: 826 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 200/381 (52%), Gaps = 6/381 (1%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C+AG    A  L ++M      P+ VTYNT+I  F   GR   A  ++ E+
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 142 DEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDANCKAG 199
            E G I PN  T+  +I  +CK G++D+A K+   M   G   P+ V YN LI   C  G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A    D M  +G+ M   T N ++H L  + +  EAY L+     +G   D  +Y 
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI G+ ++    +AL++++ M  R +  +  TY A+I+ LS+ G+ ++   + +E ++ 
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD   +N +I+   + G +++A +   +M +K   PD VT N L+ GLC  G +++A
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K       +G   D VTYNTLIS    +  ++DA  + +EM  K   P   TY A+   
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L ++G+ ++A+     MVE G
Sbjct: 841 LCKNGQGDDAENMVKEMVENG 861



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 212/448 (47%), Gaps = 27/448 (6%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N+L+           + RL   M+SL L     + + L++       S  AF L  ++  
Sbjct: 421 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFR 476

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             +     T NIM++  C  GK  +A +++R M      P+ VTYNT+I   C  G ++ 
Sbjct: 477 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQA 532

Query: 204 AFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE-VSYGTL 261
           A  +M  M  R G+  N  T  T++   C   ++DEA  + +    +G    E V Y  L
Sbjct: 533 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 592

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY    K + AL   D M ER +  +  TYN ++  L   G+  +A +++ E+   G+
Sbjct: 593 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 652

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD  T+N +I+G C EG V+KAL+    M  +  +  +VT   L+  L ++G +++  K
Sbjct: 653 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 712

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F   + +G   D V YN LI+S      ++ AF ++ EME+K++ PD  TY  +   L 
Sbjct: 713 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
             GR++EA+K    M E G                 I P  ++Y+  I+ +  +G  KDA
Sbjct: 773 LLGRVDEARKLIDEMTERG-----------------IQPDLVTYNTLISGYSMKGDVKDA 815

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
           L+I  E   KG      TY  L+ GL K
Sbjct: 816 LRIRNEMMNKGFNPTLLTYNALIQGLCK 843



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 138/275 (50%), Gaps = 37/275 (13%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            TYN ++ ALF  G+  E  +L+ +M  +GL P+  TYNIL++G+CK G +K+A+ + + 
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 681

Query: 71  MTQNKSL-----------------------------------PDVWTYNMLINGWCNAGM 95
           M++                                       PD+  YN LIN    +G 
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           ++ AF +  EME  ++ PD VTYNTL+      GR  EA KLIDE+ E GI+P+ VT+N 
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y  +G +  A +I   M   GF+P  +TYN LI   CK G  ++A  M+  M   G
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 216 LKMNTITLNTILHTLCC--EKKLDEAYMLLNSASK 248
           +  +  T  +++  L    E+ +D+  +    A+K
Sbjct: 862 ITPDDSTYISLIEGLTTEDERAIDDERLAAADAAK 896



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 23/259 (8%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L+ +M   ++   T T+N M+  L  +GK  +A+++L ++ +    P+  T+NT+I 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 334 GFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           GFCS G+V+ AL    +M E+    P+  T   ++SG C+ G +++A+K F   + KG+ 
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 393 -VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++V YN LI   C + +L+ A      M E+ +     TY  +  AL   GR  EA +
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G                 + P   +Y+  IN HC +G  K AL+IFE   ++
Sbjct: 643 LVEEMGGKG-----------------LAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685

Query: 512 GIAINKSTYMNLMNGLIKR 530
           G+     TY  L+  L K+
Sbjct: 686 GVRATVVTYTALIYALSKK 704


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 222/441 (50%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  ++ +GK+ E   L   M  +G  P+  TY  L++G CK+G    
Sbjct: 125 LGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSA 184

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    P+V+ YN +I+  C    + EAF L  EM +  + PD+ TYN+LI+
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++E+ +  I P+ V+ N ++   CKEGK+ +A  +V  M + G  P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTY  L+D +C    M+EA ++ D M  KG   N I+ NT+++  C  +++D+A  L 
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 364

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               ++    D V+Y TLI G    E+   A+ L+ EM     +P+  TY  ++  L ++
Sbjct: 365 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 424

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
               +A+ +L  +  S + PD    N  I G C  G++E A    + +  K  +PD+ T 
Sbjct: 425 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 484

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +I+++GLCR G+L++A K FR     G  ++   YNT+     +      A  LL EM  
Sbjct: 485 SIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 544

Query: 424 KKLGPDRYTYAAIHTALVESG 444
           +    D  T       L + G
Sbjct: 545 RGFSADASTMTLFVKMLSDDG 565



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 228/460 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  P+  T + ++++     ++     +L+ + K G  P+  T+  L+ G    G 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      PDV TY  LING C  G    A RL   M      P+V  YNT
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  E+   GI P+  T+N +I   C   +      ++  M ++ 
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V++NT++DA CK G + EA  ++D M ++G++ N +T   ++   C   ++DEA 
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++   +G   + +SY TLI GY + ++ ++A+ L+ EM  ++++P T TY+ +I GL
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               + + AI + +E++    IP+  T+  ++   C    + +A+     +   +  PDI
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 446

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              NI + G+CR G LE A   F +   KG   D  TY+ +I+ LC+   L++A  L  E
Sbjct: 447 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+E     +   Y  I    + +     A +    MV  G
Sbjct: 507 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 228/453 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +N +L ++ K    + +  L   M   G+ PN  T +IL++ +C L  +  A  V
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+  LI G    G + EA  L  +M      PDVVTY TLIN   +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A +L+  + +   +PN   +N +I   CK+ ++ +A  +   M   G SPD  T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI A C     +    +++ M    +  + ++ NT++  LC E K+ EA+ +++   
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RG   + V+Y  L+ G+    + + A+K++D M  +  MP+  +YN +I G  +  + +
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+ +  +IPD  T++T+IHG C   +++ A+   ++MV  S  P++VT  ILL
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L +A+   ++        D    N  I  +C+   LE A  L S +  K L 
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           PD +TY+ +   L   G L+EA K    M E G
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 236/498 (47%), Gaps = 22/498 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+   +N L++   K+      + +   M      P+++T ++LIN +C+   +  AF +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++  L   PD  T+ TLI   +  G+  EA  L D++   G +P+ VT+  +I   CK
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G    A +++ +M +    P+   YNT+ID+ CK   + EAF +   M  KG+  +  T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 223 LNTILHTLC--CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            N+++H LC  CE K      LLN         D VS+ T++    ++ K   A  + D+
Sbjct: 239 YNSLIHALCNLCEWK--HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M +R + P+  TY A++ G     + ++A+ + + ++  G +P+  ++NT+I+G+C   +
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           ++KA+    +M  +   PD VT + L+ GLC    L+ A+  F   +   +  + VTY  
Sbjct: 357 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 416

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+  LCK R L +A  LL  +E   L PD          +  +G LE A+   S +   G
Sbjct: 417 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 476

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            + P   +YS  IN  C +G   +A ++F E  + G  +N   Y
Sbjct: 477 -----------------LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 519

Query: 521 MNLMNGLIKRRKSISKAV 538
             +  G + R    S+A+
Sbjct: 520 NTITRGFL-RNNETSRAI 536



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 204/405 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD VTY T+++ L K G  +    LL  M ++   PN   YN ++   CK   
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +   M      PD++TYN LI+  CN    +    L  EM   K++PDVV++NT
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G+  EA  ++D++ + G++PN VT+  ++  +C   ++D+A K+   M   G
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ ++YNTLI+  CK   +++A  +   M R+ L  +T+T +T++H LC  ++L +A 
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 396

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +         + V+Y  L+    ++     A+ L   ++   + P     N  I G+
Sbjct: 397 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 456

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ E A D+ + L   G+ PD  T++ +I+G C  G +++A +   +M E     + 
Sbjct: 457 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 516

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
              N +  G  R     +A++  +  + +G + D+ T    +  L
Sbjct: 517 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 167/312 (53%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V++NT++DAL K+GK+ E  D++  M ++G+ PN  TY  L+ G+C L  + EA++
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M     +P+V +YN LING+C    +++A  L  EM   +L+PD VTY+TLI+   
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 387

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              R  +A  L  E+      PN VT+ I++ + CK   + +A  +++ +E +   PD  
Sbjct: 388 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 447

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
             N  ID  C+AG +E A  +   +  KGL+ +  T + +++ LC    LDEA  L    
Sbjct: 448 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G  L+   Y T+  G+ R+ + +RA++L  EM  R       T    +  LS  G  
Sbjct: 508 DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLD 567

Query: 307 EQAIDMLNELLQ 318
           +    +L E +Q
Sbjct: 568 QSLKQILREFVQ 579



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 166/349 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN+++ AL    +   V  LL++M    ++P+  ++N +V   CK G + EA
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             VVD M Q    P+V TY  L++G C    ++EA ++   M     +P+V++YNTLIN 
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  R  +A  L  E+    + P+ VT++ +I   C   ++  A  +   M      P+
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  L+D  CK   + EA  ++  +    L  +    N  +  +C   +L+ A  L +
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 470

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S +G   D  +Y  +I G  R    + A KL+ EM E     +   YN +  G  ++ 
Sbjct: 471 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 530

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           +T +AI +L E++  G   D +T    +     +G  +   Q   + V+
Sbjct: 531 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 169/378 (44%), Gaps = 17/378 (4%)

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           +++HN           ID A      M      P  V +N L+ +  K  +      +  
Sbjct: 26  SLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSH 85

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G+  N  TL+ ++++ C   ++  A+ +L    K G+  D  ++ TLI G + + 
Sbjct: 86  QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEG 145

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K   AL L+D+M      P   TY  +I GL + G T  AI +L  ++Q    P+   +N
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           TII   C + QV +A    ++MV K   PDI T N L+  LC     +         +  
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
               D V++NT++ +LCKE ++ +A  ++ +M ++ + P+  TY A+         ++EA
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            K    MV  G +                 P+ ISY+  IN +C   R   A+ +F E  
Sbjct: 326 VKVFDTMVCKGCM-----------------PNVISYNTLINGYCKIQRIDKAMYLFGEMC 368

Query: 510 QKGIAINKSTYMNLMNGL 527
           ++ +  +  TY  L++GL
Sbjct: 369 RQELIPDTVTYSTLIHGL 386



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG    PD    N  +D + + G+L   RDL S++  +GL P+  TY+I+++G C+ G 
Sbjct: 437 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 496

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++   M +N    +   YN +  G+        A +L +EM +     D  T   
Sbjct: 497 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 556

Query: 121 LINRFFESG 129
            +    + G
Sbjct: 557 FVKMLSDDG 565


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 236/456 (51%), Gaps = 1/456 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +    ++   F    + +   ++  ++K G  P+   YN L++G+CK+  + +A RV
Sbjct: 118 PDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 176

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD  TYN++I   C+ G L+ A ++  ++ S    P V+TY  LI     
Sbjct: 177 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATML 236

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL+DE+   G+KP+  T+N +I+  CKEG +D+A +++RN+E  G  PD ++
Sbjct: 237 EGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVIS 296

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+ A    G  EE  ++M  M  +    N +T + ++ TLC + K++EA  LL    
Sbjct: 297 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 356

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   D  SY  LI  + R+ + + A++  + M     +P    YN ++  L ++GK +
Sbjct: 357 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 416

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA+++  +L + G  P+ +++NT+     S G   +AL    +MV     PD +T N ++
Sbjct: 417 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMI 476

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           S LCREG+++KA +              VTYN ++   CK  R+EDA  +L  M      
Sbjct: 477 SCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCR 536

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           P+  TY  +   +  +G   EA +  + +V    I+
Sbjct: 537 PNETTYTVLIEGIGFAGYRAEAMELANDLVRINAIS 572



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 222/439 (50%), Gaps = 1/439 (0%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           + G   E   LL  M ++G  P+      L+ G+  L  + +A+RV++++ +    PDV+
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEIL-EKFGQPDVF 155

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            YN LING+C    +++A R+   M S    PD VTYN +I      G+   A K++D+L
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
                +P  +T+ I+I+    EG +D+A K++  M   G  PD  TYNT+I   CK G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + AF M+  +  KG + + I+ N +L  L  + K +E   L+          + V+Y  L
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           IT   RD K   A+ L   MKE+ + P  ++Y+ +I    + G+ + AI+ L  ++  G 
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD   +NT++   C  G+ ++AL+   K+ E    P+  + N + S L   G   +AL 
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                +  G   D +TYN++IS LC+E  ++ AF LL +M   +  P   TY  +     
Sbjct: 456 MILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC 515

Query: 442 ESGRLEEAQKFTSIMVETG 460
           ++ R+E+A      MV  G
Sbjct: 516 KAHRIEDAIDVLDSMVGNG 534



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 218/405 (53%), Gaps = 1/405 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E FG  PD   YN +++   K  ++++   +L  M+ +   P+  TYNI++   C  G 
Sbjct: 146 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 204

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A++V+D +  +   P V TY +LI      G ++EA +L  EM S  L PD+ TYNT
Sbjct: 205 LDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNT 264

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + G    AF++I  L+  G +P+ +++NI+++    +GK ++  K++  M    
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY+ LI   C+ G +EEA  ++ +M  KGL  +  + + ++   C E +LD A 
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 384

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L +    G   D V+Y T++    ++ KA++AL+++ ++ E    P++ +YN M   L
Sbjct: 385 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG   +A+ M+ E++ +G+ PDE T+N++I   C EG V+KA +    M    F P +
Sbjct: 445 WSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSV 504

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT NI+L G C+   +E A+    S +  G   +  TY  LI  +
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 235/472 (49%), Gaps = 18/472 (3%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           C+ G   E++ +++ M +    PDV     LI G+     + +A R+ + +E     PDV
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDV 154

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
             YN LIN F +  R  +A +++D +      P+ VT+NIMI   C  GK+D A K++  
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           +  +   P  +TY  LI+A    G ++EA +++D M  +GLK +  T NTI+  +C E  
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D A+ ++ +   +G   D +SY  L+       K     KL  +M   +  P+  TY+ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + GK E+A+++L  + + G+ PD  +++ +I  FC EG+++ A++F   M+   
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PDIV  N +L+ LC+ G  ++AL+ F      G + +S +YNT+ S+L        A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            ++ EM    + PD  TY ++ + L   G +++A +    M                   
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSC---------------- 498

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            E  PS ++Y+  +   C   R +DA+ + +     G   N++TY  L+ G+
Sbjct: 499 -EFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 210/415 (50%), Gaps = 11/415 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN ++ +L  +GKL+    +L  +      P   TY IL+      G + EA+++
Sbjct: 187 PDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 246

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD++TYN +I G C  GM++ AF + + +E     PDV++YN L+     
Sbjct: 247 LDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLN 306

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  E  KL+ ++      PN VT++I+I   C++GKI++A  +++ M+E G +PD  +
Sbjct: 307 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 366

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI A C+ G ++ A   ++ M   G   + +  NT+L TLC   K D+A  +     
Sbjct: 367 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 426

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   +  SY T+ +  +      RAL +  EM    I P   TYN+MI  L + G  +
Sbjct: 427 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVD 486

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A ++L ++      P   T+N ++ GFC   ++E A+   + MV    +P+  T  +L+
Sbjct: 487 KAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            G+   G   +A++          A D V  N +  S    +RL   F LL+ ++
Sbjct: 547 EGIGFAGYRAEAMEL---------ANDLVRINAI--SEYSFKRLHRTFPLLNVLQ 590



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 193/359 (53%), Gaps = 8/359 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P  +TY  +++A   +G ++E   LL +M  +GL P+  TYN ++ G CK G +  A 
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  +      PDV +YN+L+    N G  EE  +L  +M S K  P+VVTY+ LI   
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 339

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G+  EA  L+  + E G+ P+A +++ +I  +C+EG++D A + +  M  +G  PD 
Sbjct: 340 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-CCEKKLDEAYMLLN 244
           V YNT++   CK G  ++A  +   +G  G   N+ + NT+   L     K+   +M+L 
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S  G   DE++Y ++I+   R+   ++A +L  +M+  +  PS  TYN ++ G  ++ 
Sbjct: 460 MVSN-GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 518

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV------EKSFK 357
           + E AID+L+ ++ +G  P+ETT+  +I G    G   +A++  N +V      E SFK
Sbjct: 519 RIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFK 577



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 213/449 (47%), Gaps = 19/449 (4%)

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C +G   E+  L + M      PDV+    LI  FF      +A ++++ L++ G +P+ 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             +N +I  +CK  +ID A +++  M    FSPD VTYN +I + C  G ++ A +++D 
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +     +   IT   ++     E  +DEA  LL+    RG   D  +Y T+I G  ++  
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            +RA ++   ++ +   P   +YN ++  L   GK E+   ++ ++      P+  T++ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I   C +G++E+A+     M EK   PD  + + L++  CREG L+ A++F  + I  G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D V YNT++++LCK  + + A  +  ++ E    P+  +Y  + +AL  SG    A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                MV  G                 IDP  I+Y+  I+  C +G    A ++  + R 
Sbjct: 455 HMILEMVSNG-----------------IDPDEITYNSMISCLCREGMVDKAFELLVDMRS 497

Query: 511 KGIAINKSTYMNLMNGLIKRRKSISKAVD 539
                +  TY  ++ G  K  + I  A+D
Sbjct: 498 CEFHPSVVTYNIVLLGFCKAHR-IEDAID 525



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 167/320 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYNTI+  + K+G ++   +++ +++ +G  P+  +YNIL+      G  +E 
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG 313

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M   K  P+V TY++LI   C  G +EEA  L K M+   L PD  +Y+ LI  
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   GR   A + ++ +   G  P+ V +N ++   CK GK D+A +I   + E G SP+
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +YNT+  A   +G+   A  M+  M   G+  + IT N+++  LC E  +D+A+ LL 
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLV 493

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                 ++   V+Y  ++ G+ +  +   A+ + D M      P+  TY  +I G+  +G
Sbjct: 494 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAG 553

Query: 305 KTEQAIDMLNELLQSGMIPD 324
              +A+++ N+L++   I +
Sbjct: 554 YRAEAMELANDLVRINAISE 573



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 174/368 (47%), Gaps = 53/368 (14%)

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           +C++GN  E+  +++ M RKG   + I    ++      + + +A  ++    K G   D
Sbjct: 95  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQP-D 153

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y  LI G+ +  + + A ++ D M+ +   P T TYN MI  L   GK + A+ +L+
Sbjct: 154 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           +LL     P   T+  +I     EG V++AL+  ++M+ +  KPD+ T N ++ G+C+EG
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273

Query: 375 ILEKALKFFRSWILKGKAVDSVTYN----------------------------------- 399
           ++++A +  R+  LKG   D ++YN                                   
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI++LC++ ++E+A  LL  M+EK L PD Y+Y  +  A    GRL+ A +F   M+  
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G +                 P  ++Y+  +   C  G+   AL+IF +  + G + N S+
Sbjct: 394 GCL-----------------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 436

Query: 520 YMNLMNGL 527
           Y  + + L
Sbjct: 437 YNTMFSAL 444



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 150/304 (49%), Gaps = 18/304 (5%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           I H  C      E+  LL +  ++GY  D +    LI G+F      +A+++  E+ E+ 
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKF 149

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P  F YNA+I G  +  + + A  +L+ +      PD  T+N +I   CS G+++ AL
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  ++++  + +P ++T  IL+     EG +++ALK     + +G   D  TYNT+I  +
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CKE  ++ AF ++  +E K   PD  +Y  +  AL+  G+ EE +K  + M         
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS------- 322

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                     E+ DP+ ++YS  I   C  G+ ++A+ + +  ++KG+  +  +Y  L+ 
Sbjct: 323 ----------EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 372

Query: 526 GLIK 529
              +
Sbjct: 373 AFCR 376



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 46/274 (16%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VTY+ ++  L + GK+ E  +LL  MK++GL P+  +Y+ L++ +C+ G L  A+
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 384

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF------------------------- 100
             ++ M  +  LPD+  YN ++   C  G  ++A                          
Sbjct: 385 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444

Query: 101 -----RLRK-----EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
                ++R      EM S  + PD +TYN++I+     G   +AF+L+ ++      P+ 
Sbjct: 445 WSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSV 504

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           VT+NI++  +CK  +I+ A  ++ +M  NG  P+  TY  LI+    AG   EA  + + 
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 564

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           +    +++N I+  +        K+L   + LLN
Sbjct: 565 L----VRINAISEYSF-------KRLHRTFPLLN 587



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 18/205 (8%)

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           +T    I H  C  G   ++L     MV K + PD++ C  L+ G      + KA++   
Sbjct: 85  DTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME 144

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G+  D   YN LI+  CK  R++DA  +L  M  K   PD  TY  +  +L   G
Sbjct: 145 ILEKFGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 203

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L+ A           K+  Q++  N         P+ I+Y+  I     +G   +AL++
Sbjct: 204 KLDLAL----------KVLDQLLSDNCQ-------PTVITYTILIEATMLEGGVDEALKL 246

Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
            +E   +G+  +  TY  ++ G+ K
Sbjct: 247 LDEMLSRGLKPDMFTYNTIIRGMCK 271


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 260/514 (50%), Gaps = 17/514 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  +YN ++  L+K G   +   L  +M ++ +VPN  TYN ++ G+ K G L+   R+
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M ++   P+V TYN+L++G C AG + E   +  EM S K++PD  TY+ L +    
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L +E  + G+K  A T +I++   CK+GKI KA ++++ +  +G     V 
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+ G++E AF +   M  + ++ + IT N +++ L   +++ EA+ L+    
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G      ++ TLI  Y R  +  +   +  +M+E+ + P+  +Y +++    ++GK  
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L+++    ++P    +N II  +   G  ++A     KM      P IVT N+L+
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC++  + +A +   S    G A D ++YNTLIS+ C     + A  L  EM +  + 
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIK 605

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P   TY  + ++L  +GR+ E +     M++                 +++ P S  Y+ 
Sbjct: 606 PSPRTYRMLFSSLGGAGRVHEMENLYQQMLD-----------------KDVVPCSGIYNI 648

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
            ++ +   G       + +E   KGIA+   T M
Sbjct: 649 MVDAYAKCGEESKVEALRKEMSDKGIAVGDYTSM 682



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 221/461 (47%), Gaps = 35/461 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+++TYNT++D   KKG L     L S M + GL PN  TYN+L+SG C+ G + E   
Sbjct: 220 VPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAA 279

Query: 67  VVDLMTQNKSLPDVWTY-----------------------------------NMLINGWC 91
           V+D M   K +PD +TY                                   ++L+NG C
Sbjct: 280 VLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLC 339

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G + +A  + + + +  LL   V YNTLIN + + G    AF +  ++    I+P+ +
Sbjct: 340 KDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHI 399

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I    K  +I +A  +V  ME+NG +P   T+NTLIDA  +AG +E+ F ++  M
Sbjct: 400 TYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDM 459

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KGLK N ++  +I++  C   K+ EA  +L+    +        Y  +I  Y      
Sbjct: 460 QEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGST 519

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           ++A  L ++MK   + PS  TYN +I GL +  +  +A ++L+ L   G+ PD  ++NT+
Sbjct: 520 DQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTL 579

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C     ++AL+   +M +   KP   T  +L S L   G + +    ++  + K  
Sbjct: 580 ISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDV 639

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              S  YN ++ +  K         L  EM +K +    YT
Sbjct: 640 VPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 242/505 (47%), Gaps = 18/505 (3%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM-TQNKSLPDVWT 82
           G+  +VR     +      P+  T+N  V      G L EA+ ++  M       P+ ++
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           YN++I G   AG   +A +L  EM    ++P+ +TYNT+I+   + G     F+L  ++ 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
            HG+KPN +T+N+++   C+ G++ +   ++  M      PD  TY+ L D + + G+ +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
               + +   +KG+K+   T + +L+ LC + K+ +A  +L +    G     V Y TLI
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            GY +      A  ++ +MK R I P   TYNA+I GL +  +  +A D++ E+ ++G+ 
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P   TFNT+I  +   GQ+EK     + M EK  KP++V+   +++  C+ G + +A+  
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
                +K     +  YN +I +  +    + AF L  +M+   + P   TY  +   L +
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             ++ EA++    +   G                 + P  ISY+  I+  C +     AL
Sbjct: 551 QSQISEAEELLDSLRNYG-----------------LAPDVISYNTLISACCYRSNTDRAL 593

Query: 503 QIFEETRQKGIAINKSTYMNLMNGL 527
           ++ +E  + GI  +  TY  L + L
Sbjct: 594 ELEKEMWKCGIKPSPRTYRMLFSSL 618



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 192/394 (48%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  TY+ + D   + G    +  L  +  K+G+     T +IL++G CK G + +A  
Sbjct: 290 VPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEE 349

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  +  +  L     YN LING+C  G LE AF + ++M+S  + PD +TYN LIN   
Sbjct: 350 VLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLG 409

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +  R  EA  L+ E++++G+ P+  T N +I  Y + G+++K   I+ +M+E G  P+ V
Sbjct: 410 KVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVV 469

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +Y ++++A CK G + EA  ++D M  K +       N I+         D+A+ML    
Sbjct: 470 SYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G     V+Y  LI G  +  + + A +L D ++   + P   +YN +I        T
Sbjct: 530 KSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNT 589

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A+++  E+ + G+ P   T+  +       G+V +    + +M++K   P     NI+
Sbjct: 590 DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIM 649

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           +    + G   K     +    KG AV   T  T
Sbjct: 650 VDAYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 53/418 (12%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK-PNAVTHNIMIKWYCKEGKIDKACK 171
           PD  T+N  +     +G   EA  ++  +   G   PNA ++N++I    K G    A K
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           +   M E    P+ +TYNT+ID + K G++E  FR+   M R GLK N IT         
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVIT--------- 260

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
                                     Y  L++G  R  +      + DEM  R+++P  F
Sbjct: 261 --------------------------YNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGF 294

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TY+ +  G S++G ++  + +  E ++ G+     T + +++G C +G++ KA +    +
Sbjct: 295 TYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTL 354

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           V        V  N L++G C+ G LE A   F+    +    D +TYN LI+ L K  R+
Sbjct: 355 VNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERI 414

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
            +A  L+ EME+  + P   T+  +  A   +G+LE+     S M E G           
Sbjct: 415 TEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKG----------- 463

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 + P+ +SY   +N  C  G+  +A+ I ++   K +      Y  +++  I+
Sbjct: 464 ------LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIE 515



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 168/351 (47%), Gaps = 18/351 (5%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEAYM 241
           PD  T+N  + A   AG+++EA  M+  MG  G    N  + N ++  L       +A  
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +   ++    + ++Y T+I G+ +        +LW +M    + P+  TYN ++ GL 
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G+  +   +L+E+    M+PD  T++ +  G    G  +  L    + V+K  K    
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           TC+ILL+GLC++G + KA +  ++ +  G    +V YNTLI+  C+   LE AF +  +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           + + + PD  TY A+   L +  R+ EA      M + G                 ++PS
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG-----------------VNPS 432

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +++  I+ +   G+ +    I  + ++KG+  N  +Y +++N   K  K
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 35/352 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L   V YNT+++   + G L     +   MK + + P+  TYN L++G  K+  + EA
Sbjct: 358 GLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEA 417

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +V  M +N   P V T+N LI+ +  AG LE+ F +  +M+   L P+VV+Y +++N 
Sbjct: 418 HDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNA 477

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G+ +EA  ++D++    + P A  +N +I  Y + G  D+A  +   M+ +G  P 
Sbjct: 478 FCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPS 537

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI   CK   + EA  ++D +   GL  + I+ NT++   C     D       
Sbjct: 538 IVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD------- 590

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                                       RAL+L  EM +  I PS  TY  +   L  +G
Sbjct: 591 ----------------------------RALELEKEMWKCGIKPSPRTYRMLFSSLGGAG 622

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +  +  ++  ++L   ++P    +N ++  +   G+  K      +M +K  
Sbjct: 623 RVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 113/203 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P   T+NT++DA  + G+L +   +LSDM+++GL PN  +Y  +V+ +CK G 
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ ++D M     LP    YN +I+ +   G  ++AF L ++M+S  + P +VTYN 
Sbjct: 484 ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNL 543

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  +  EA +L+D L  +G+ P+ +++N +I   C     D+A ++ + M + G
Sbjct: 544 LIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCG 603

Query: 181 FSPDCVTYNTLIDANCKAGNMEE 203
             P   TY  L  +   AG + E
Sbjct: 604 IKPSPRTYRMLFSSLGGAGRVHE 626



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 108/222 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V+Y +I++A  K GK+ E   +L DM  + ++P    YN ++  Y + G 
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  + + M  +   P + TYN+LI G C    + EA  L   + +  L PDV++YNT
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNT 578

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+       +  A +L  E+ + GIKP+  T+ ++       G++ +   + + M +  
Sbjct: 579 LISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKD 638

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
             P    YN ++DA  K G   +   +   M  KG+ +   T
Sbjct: 639 VVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 19/216 (8%)

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKM-VEKSFKPDIVTCNILLSGLCREGILEKALK 381
           PD  T+N  +      G +++A+    +M  + +  P+  + N++++GL + G    A+K
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F     K    + +TYNT+I    K+  LE  F L S+M    L P+  TY  + + L 
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
            +GR+ E       M                    ++ P   +YS   + H   G  +  
Sbjct: 270 RAGRMGETAAVLDEMAS-----------------RKMVPDGFTYSILFDGHSRTGDSQTM 312

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           L +FEE+ +KG+ I   T   L+NGL K  K ISKA
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGK-ISKA 347


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 256/500 (51%), Gaps = 41/500 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY++I+ AL K   +++  ++L+ M K G++PN  TYN ++ GYC     KEA+  
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGF 288

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  +   PDV TYN L++  C  G   EA ++   M    L PD+ TY TL+  +  
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT 348

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G  +E   L+D +  +GI P+    NI+I  Y K+ K+D+A  +   M ++G +P+ VT
Sbjct: 349 KGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVT 408

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  +I   CK+G++++A    + M  +GL  N I   +++H+LC   K D+A  L+    
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEML 468

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG  L+ + + ++I  + ++ +   + KL+D M    + P+  TY+ +I G   +GK +
Sbjct: 469 DRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMD 528

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L+ +   GM PD  T+NT+I+G+C   +++ AL    +MV     P+I+T NI+L
Sbjct: 529 EATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588

Query: 368 S-----------------------------------GLCREGILEKALKFFRSWILKGKA 392
                                               GLC+  + ++AL+ F++  L    
Sbjct: 589 QGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 648

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QK 451
           +++ T+N +I +L K  R ++A  L        L P+ +TY  +   ++  G LEE  Q 
Sbjct: 649 LETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 452 FTSI-----MVETGKINHQV 466
           F S+      V++G +N  V
Sbjct: 709 FFSMEDNGCTVDSGMLNFIV 728



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 263/532 (49%), Gaps = 21/532 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY  ++    + G+L+     L ++ K+G      T+  L+ G C      +AM +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +PDV++  +L+ G C+    +EA  L   M   +     PDVV+Y T+IN
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G S +A+    E+ +  I P+ VT++ +I   CK   +DKA +++  M +NG  P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +C+TYN+++   C +   +EA   +  M   G++ + +T N+++  LC   +  EA  + 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S +KRG   D  +Y TL+ GY           L D M    I P    +N +I   ++ 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K ++A+ + +++ Q G+ P+  T+  +I   C  G V+ A+ +  +M+++   P+I+  
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+  LC     +KA +     + +G  ++++ +N++I S CKE R+ ++  L   M  
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + P+  TY+ +      +G+++EA K  S M   G                 + P  +
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG-----------------MKPDCV 547

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +Y+  IN +C   R  DAL +F+E    G++ N  TY  ++ GL   R++ +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 599



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 234/458 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P+  TY  L+ GY   G 
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   PD   +N+LI  +     ++EA  +  +M    L P+VVTY  
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    +SG   +A    +++ + G+ PN + +  +I   C   K DKA +++  M + G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + +N++I ++CK G + E+ ++ D+M R G+K N IT +T++   C   K+DEA 
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+S    G   D V+Y TLI GY R  + + AL L+ EM    + P+  TYN ++ GL
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     + + 
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 651

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  ++A   F ++   G   +  TY  +  ++  +  LE+   L   
Sbjct: 652 RTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFS 711

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           ME+     D      I   L++ G +  A  + S++ E
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 247/490 (50%), Gaps = 41/490 (8%)

Query: 11  VTYNTILDALFKKGKLNEVRDL-LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           +T+  +L  L    + ++  D+ L  M +   +P+  +  IL+ G C     +EA+ ++ 
Sbjct: 123 ITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLH 182

Query: 70  LMTQNK---SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +M  ++   S PDV +Y  +ING+   G  ++A+    EM   ++ PDVVTY+++I    
Sbjct: 183 MMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALC 242

Query: 127 ESGRSME-AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           + G++M+ A +++  + ++G+ PN +T+N ++  YC   +  +A   ++ M  +G  PD 
Sbjct: 243 K-GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDV 301

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN+L+D  CK G   EA ++ D M ++GL+ +  T  T+L     +  L E + LL+ 
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G + D   +  LI  Y + EK + A+ ++ +M++  + P+  TY A+I  L +SG 
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421

Query: 306 T-------EQAID----------------------------MLNELLQSGMIPDETTFNT 330
                   EQ ID                            ++ E+L  G+  +   FN+
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           IIH  C EG+V ++ +  + MV    KP+++T + L+ G C  G +++A K   S    G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D VTYNTLI+  C+  R++DA  L  EM    + P+  TY  I   L  + R   A+
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 451 KFTSIMVETG 460
           +    + ++G
Sbjct: 602 ELYVGITKSG 611



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 27/389 (6%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P   T+ I+I   C+ G++D     + N+ + GF  + +T+  L+   C      +A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA- 141

Query: 206 RMMDVMGRKGLKM----NTITLNTILHTLCCEKKLDEAYMLLN-SASKR--GYYLDEVSY 258
             MD++ R+  ++    +  +   +L  LC E +  EA  LL+  A  R  G   D VSY
Sbjct: 142 --MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            T+I G+F++  +++A   + EM +R+I P   TY+++I  L +    ++A+++L  +++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G++P+  T+N+I+HG+CS  Q ++A+ F  KM     +PD+VT N L+  LC+ G   +
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A K F S   +G   D  TY TL+     +  L +   LL  M    + PD + +  +  
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           A  +  +++EA    S M + G                 ++P+ ++Y   I   C  G  
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHG-----------------LNPNVVTYGAVIGILCKSGSV 422

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGL 527
            DA+  FE+   +G+  N   Y +L++ L
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 9/208 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +TYN IL  LF   +    ++L   + K G     +TYNI++ G CK     EA
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635

Query: 65  MRVVDLMTQNKSLPDVW----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +R    M QN  L D+     T+N++I      G  +EA  L     S  L+P+  TY  
Sbjct: 636 LR----MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +       G   E  +L   ++++G   ++   N +++   + G+I +A   +  ++E  
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           FS +  T +  ID     G  +E  R +
Sbjct: 752 FSLEASTASLFIDL-LSGGKYQEYHRFL 778


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 263/531 (49%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +Y+ +L +L  +GK  +  DLL  M + G V  PN   YN ++ G+ K G +
Sbjct: 179 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 238

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD+ TYN +++  C A  +++A    ++M + ++LP+  TYN L
Sbjct: 239 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+  H I P+ VT ++++   CK GKI +A  +   M   G 
Sbjct: 299 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 358

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  +YN +++     G + +   + D+M   G+  +  T N ++        LD+A +
Sbjct: 359 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G   D V+Y T+I    R  K + A++ +++M ++ + P  + YN +I G  
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 478

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A ++++E++ +GM  D   F++II+  C  G+V  A    +  V     PD V
Sbjct: 479 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 538

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N+L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 539 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 598

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++ + P    Y+ I   L E+GR   A+     M E+G                +I   
Sbjct: 599 LQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG-------------IAMDICTY 645

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +I         C    + +A+ +F+E R   + IN  T   +++G+ + R+
Sbjct: 646 NIVLRGLFKNRC----FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 692



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 251/529 (47%), Gaps = 72/529 (13%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C P+ V YNT++D  FK+G +N+  DL  +M ++G+ P+  TYN +V   CK   + 
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 274

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT----- 117
           +A   +  M   + LP+ WTYN LI G+ + G  +EA R+ KEM    +LPDVVT     
Sbjct: 275 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 334

Query: 118 ------------------------------YNTLINRFFESGRSMEAFKLIDELDEHGIK 147
                                         YN ++N +   G  ++   L D +   GI 
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 394

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF-- 205
           P+  T N++IK Y   G +DKA  I   M ++G  PD VTY T+I A C+ G M++A   
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454

Query: 206 --RMMD-------------VMG------------------RKGLKMNTITLNTILHTLCC 232
             +M+D             + G                    G+ ++ +  ++I++ LC 
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 514

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++ +A  + +     G + D V Y  L+ GY    K  +AL+++D M    I P+   
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKM 351
           Y  ++ G  + G+ ++ + +  E+LQ G+ P    ++ II G    G+ V   ++FH +M
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFH-EM 633

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            E     DI T NI+L GL +    ++A+  F+        ++ +T NT+I  + + RR+
Sbjct: 634 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 693

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           E+A  L + +   +L P   TY+ + T L++ G +EEA+   S M   G
Sbjct: 694 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 253/530 (47%), Gaps = 20/530 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  N    N L+ G+C+     EA+ +
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++Y++L+   C+ G   +A  L + M     +  P+VV YNT+I+ 
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT+N ++   CK   +DKA   +R M      P+
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R  +  + +TL+ ++ +LC   K+ EA  + +
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  SY  ++ GY           L+D M    I P  +T+N +I   +  G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ PD  T+ T+I   C  G+++ A++  N+M+++   PD    N
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V ++++I++LCK  R+ DA  +       
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD   Y  +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNVVG 574

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           Y   +N +C  GR  + L +F E  Q+GI  +   Y  +++GL +  +++
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV 624



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 241/449 (53%), Gaps = 2/449 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD VT + ++ +L K GK+ E RD+   M  +G  P+  +YNI+++GY   G L +   
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + DLM  +   PD +T+N+LI  + N GML++A  +  EM    + PDVVTY T+I    
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+  +A +  +++ + G+ P+   +N +I+ +C  G + KA +++  +  NG   D V
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            ++++I+  CK G + +A  + D+    GL  + +  N ++   C   K+++A  + ++ 
Sbjct: 504 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 563

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + V YGTL+ GY +  + +  L L+ EM +R I PST  Y+ +I GL ++G+T
Sbjct: 564 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRT 623

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A    +E+ +SG+  D  T+N ++ G       ++A+    ++   + K +I+T N +
Sbjct: 624 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDS-VTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           + G+ +   +E+A   F S I + + V S VTY+ +I++L KE  +E+A  + S M+   
Sbjct: 684 IDGMFQTRRVEEAKDLFAS-ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             P+      +   L++   +  A  + S
Sbjct: 743 CEPNSRLLNHVVRELLKKNEIVRAGAYLS 771



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 183/403 (45%), Gaps = 61/403 (15%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP   TY  L+D   +A   E A      + R GL++N I  N +L   C  K+ DEA 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 241 -MLLNSASKRGYYLD-------------------------------------EVSYGTLI 262
            +LL+   + G   D                                      V+Y T+I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+F++   N+A  L+ EM +R I P   TYN+++  L ++   ++A   L +++   ++
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T+N +I+G+ S GQ ++A++   +M   S  PD+VT ++L+  LC+ G +++A   
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F +  +KG+  D  +YN +++    +  L D   L   M    + PD YT+  +  A   
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G L++A    + M + G                 + P  ++Y   I   C  G+  DA+
Sbjct: 410 CGMLDKAMIIFNEMRDHG-----------------VKPDVVTYRTVIAALCRIGKMDDAM 452

Query: 503 QIFEETRQKGIAINKSTYMNLMNG------LIKRRKSISKAVD 539
           + F +   +G+A +K  Y  L+ G      L+K ++ IS+ ++
Sbjct: 453 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 95/204 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  + Y+ I+D LF+ G+    +    +M + G+  +  TYNI++ G  K     EA
Sbjct: 602 GIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 661

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   +       ++ T N +I+G      +EEA  L   +   +L+P VVTY+ +I  
Sbjct: 662 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 721

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA  +   +   G +PN+   N +++   K+ +I +A   +  ++E  FS +
Sbjct: 722 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 781

Query: 185 CVTYNTLIDANCKAGNMEEAFRMM 208
            +T   L+D     G   E  R +
Sbjct: 782 HLTAMLLVDLFSSKGTCREQIRFL 805


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 257/506 (50%), Gaps = 17/506 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP    +N +L A+ K  K + V  L   M++ G+  N  TYNIL++ +C+   +  A+ 
Sbjct: 82  LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T + L+NG+C+   + +A  L  +M  +   PD +T+ TLI+  F
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  L+D + + G +PN VT+ +++   CK G ID A  ++  ME      + V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+T+ID+ CK  + ++A  +   M  KG++ N IT ++++  LC  ++  +A  LL+  
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++  LI  + ++ K   A KL+DEM +R I P  FTY+++I G     + 
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++     P+  T+NT+I+GFC   ++++ ++   +M ++    + VT   L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  +    + A   F+  +  G   + +TYNTL+  LCK  +LE A  +   ++  K+
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P  YTY  +   + ++G++E+       +   G                 + P  I Y+
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-----------------VKPDVIIYN 544

Query: 487 EKINEHCSQGRYKDALQIFEETRQKG 512
             I+  C +G  ++A  +F + R+ G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 231/432 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT +++L+      ++++   L+  M + G  P+  T+  L+ G      
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +VD M Q    P++ TY +++NG C  G ++ AF L  +ME+ K+  +VV Y+T
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E++  G++PN +T++ +I   C   +   A +++ +M E  
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT+N LIDA  K G + EA ++ D M ++ +  +  T +++++  C   +LDEA 
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +  + + V+Y TLI G+ + ++ +  ++L+ EM +R ++ +T TY  +I G 
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+   + A  +  +++  G+ P+  T+NT++ G C  G++EKA+     +     +P I
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G+C+ G +E     F S  LKG   D + YNT+IS  C++   E+A  L  +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565

Query: 421 MEEKKLGPDRYT 432
           M E    PD  T
Sbjct: 566 MREDGPLPDSGT 577



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 234/472 (49%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++ LP ++ +N L++        +    L ++M+ L +  ++ TYN 
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    +   A  L+ ++ + G +P+ VT + ++  YC   +I  A  +V  M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD +T+ TLI          EA  ++D M ++G + N +T   +++ LC    +D A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN         + V Y T+I    +    + AL L+ EM+ + + P+  TY+++I  L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               +   A  +L+++++  + P+  TFN +I  F  EG++ +A + +++M+++S  PDI
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T + L++G C    L++A   F   I K    + VTYNTLI+  CK +R+++   L  E
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ L  +  TY  +     ++   + AQ     MV  G                 + P
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-----------------VHP 468

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++Y+  ++  C  G+ + A+ +FE  ++  +     TY  ++ G+ K  K
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 166/372 (44%), Gaps = 20/372 (5%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            FS     Y  ++     +  +++A  +   M +     +    N +L  +   KK D  
Sbjct: 45  AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L     + G   +  +Y  LI  + R  + + AL L  +M +    PS  T ++++ G
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
                +   A+ +++++++ G  PD  TF T+IHG     +  +A+   ++MV++  +P+
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT  ++++GLC+ G ++ A              + V Y+T+I SLCK R  +DA  L +
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------- 471
           EME K + P+  TY+++ + L    R  +A +  S M+E  KIN  VV  N         
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKE 343

Query: 472 -----------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            IDP   +YS  IN  C   R  +A  +FE    K    N  TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403

Query: 521 MNLMNGLIKRRK 532
             L+NG  K ++
Sbjct: 404 NTLINGFCKAKR 415



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 41/214 (19%)

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLC-----------------REGI----LEKALKFFRS 385
           F ++ ++    P I   +I L G+C                 R G+    L+ A+  F  
Sbjct: 16  FVHRNLQGKGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLF-G 74

Query: 386 WILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
            ++K + + S+  +N L+S++ K ++ +    L  +M+   +  + YTY  +        
Sbjct: 75  GMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 134

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           ++  A      M++ G                  +PS ++ S  +N +C   R  DA+ +
Sbjct: 135 QISLALALLGKMMKLG-----------------YEPSIVTLSSLLNGYCHGKRISDAVAL 177

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            ++  + G   +  T+  L++GL    K+ S+AV
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKA-SEAV 210


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 230/433 (53%), Gaps = 4/433 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD V Y T++ AL  +G + E   LL +M   G   +  T+N LV G C LG 
Sbjct: 203 MARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGR 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R+VD M     +P V TY  L+ G C     +EA  +   +  +    +VV  NT
Sbjct: 263 VREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNT 318

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I      G+   A +L + +   G  P+  T++I++   CK G+   A +++  MEE G
Sbjct: 319 VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKG 378

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY+TL+ + C+ G  ++A  M+D M  KG  MN+   N I++ LC + KLD+A 
Sbjct: 379 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQAT 438

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     +G   D  +Y T+I     ++    A  ++  + E  ++ +  TYN +I  L
Sbjct: 439 RLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ ++ + + +E+L  G   D  ++N +I   C EG V++++    +MV K  KP+ 
Sbjct: 499 LRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNN 558

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N+L++ LC+ G +  AL+  +  + +G   D VTYNTLI+ LCK      A  LL +
Sbjct: 559 FSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEK 618

Query: 421 MEEKKLGPDRYTY 433
           +  + + PD  TY
Sbjct: 619 LPNENVHPDIVTY 631



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 249/523 (47%), Gaps = 21/523 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T+     AL + G+  +   LL  M + G VP+   Y  ++      G + EA  +
Sbjct: 175 PTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAML 234

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M       DV T+N L+ G C  G + EA RL   M +   +P VVTY  L+     
Sbjct: 235 LDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCR 294

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + ++ EA  ++  L E     N V  N +I+    EGK+ +A ++   M   G  PD  T
Sbjct: 295 TRQADEACAMLGRLPE----VNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHT 350

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ L+   CK G    A RM+D M  KG   N +T +T+LH+ C     D+A  +L+   
Sbjct: 351 YSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQML 410

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G+ ++   Y  +I    +D K ++A +L  EMK +   P   TYN MI+ L  +   E
Sbjct: 411 AKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLME 470

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +   L++ G++ +  T+NT+IH     G+ ++ L+  ++M+    + D+++ N L+
Sbjct: 471 EAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLI 530

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+EG +++++      + KG   ++ +YN LI+ LCK  ++ DA  L  EM  + L 
Sbjct: 531 KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLT 590

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +   L + G    A      +            PN     E + P  ++Y+ 
Sbjct: 591 PDIVTYNTLINGLCKVGWTHAALNLLEKL------------PN-----ENVHPDIVTYNI 633

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I+ HC      DA  + ++    GI  N+ T+  ++   +++
Sbjct: 634 LISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 217/436 (49%), Gaps = 31/436 (7%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK------ 57
            GC  D  T+N ++  L   G++ E   L+  M  QG +P+  TY  L+ G C+      
Sbjct: 241 MGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADE 300

Query: 58  ----LGWLKE---------------------AMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
               LG L E                     A  + ++M      PDV TY++L++G C 
Sbjct: 301 ACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G    A R+  EME     P++VTY+TL++ F  +G   +A  ++D++   G   N+  
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +I   CK+GK+D+A ++V+ M+  G  PD  TYNT+I   C    MEEA  +   + 
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G+  N IT NT++H L    +  E   L +     G  LD +SY  LI    ++   +
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           R++ L +EM  + I P+ F+YN +I  L ++GK   A+++  E+L  G+ PD  T+NT+I
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G C  G    AL    K+  ++  PDIVT NIL+S  C+  +L+ A       I  G  
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIV 660

Query: 393 VDSVTYNTLISSLCKE 408
            +  T+  ++ +  ++
Sbjct: 661 PNERTWGMMVQNFVRQ 676



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 225/471 (47%), Gaps = 22/471 (4%)

Query: 63  EAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            A+ ++D M +  ++ P   +YN++++    A    +A  L + M   ++ P   T+   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
                  GR+ +A  L+  +  HG  P+AV +  +I     +G + +A  ++  M   G 
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           + D  T+N L+   C  G + EA R++D M  +G   + +T   +L  LC  ++ DEA  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L    +    ++ V   T+I G   + K  RA +L++ M  +   P   TY+ ++ GL 
Sbjct: 304 MLGRLPE----VNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+   A+ ML+E+ + G  P+  T++T++H FC  G  + A    ++M+ K F  +  
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++  LC++G L++A +  +    +G   D  TYNT+I  LC    +E+A  +   +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E+ +  +  TY  +  AL+ +GR +E  +  S M+  G                ++D  
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC---------------QLD-- 522

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            ISY+  I   C +G    ++ + EE   KGI  N  +Y  L+N L K  K
Sbjct: 523 VISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 186/374 (49%), Gaps = 2/374 (0%)

Query: 4   FGCLPDN--VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            G LP+   V  NT++     +GKL    +L   M  +G  P+  TY+IL+ G CKLG  
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A+R++D M +    P++ TY+ L++ +C  GM ++A  +  +M +     +   YN +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I    + G+  +A +L+ E+   G KP+  T+N MI   C    +++A  I RN+ E G 
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             + +TYNTLI A  + G  +E  R+   M   G +++ I+ N ++  LC E  +D +  
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL     +G   +  SY  LI    +  K   AL+L  EM  + + P   TYN +I GL 
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 604

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G T  A+++L +L    + PD  T+N +I   C    ++ A    +K +     P+  
Sbjct: 605 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNER 664

Query: 362 TCNILLSGLCREGI 375
           T  +++    R+ +
Sbjct: 665 TWGMMVQNFVRQTV 678



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 155/297 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTY+T+L +  + G  ++ R +L  M  +G   N   YN ++   CK G 
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK 433

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A R+V  M      PD+ TYN +I   CN  ++EEA  + + +    ++ + +TYNT
Sbjct: 434 LDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNT 493

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    +GR  E  +L  E+  HG + + +++N +IK  CKEG +D++  ++  M   G
Sbjct: 494 LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  +YN LI+  CKAG + +A  +   M  +GL  + +T NT+++ LC       A 
Sbjct: 554 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 613

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            LL        + D V+Y  LI+ + +    + A  L D+     I+P+  T+  M+
Sbjct: 614 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 75/131 (57%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+N +YN +++ L K GK+ +  +L  +M  QGL P+  TYN L++G CK+GW   A
Sbjct: 553 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 612

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +++ +      PD+ TYN+LI+  C   +L++A  L  +  S  ++P+  T+  ++  
Sbjct: 613 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQN 672

Query: 125 FFESGRSMEAF 135
           F     ++E +
Sbjct: 673 FVRQTVNLEGY 683


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 164/546 (30%), Positives = 260/546 (47%), Gaps = 41/546 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T N IL ++ K  +   V  L  +M  +G+ PN  T+NIL++G C  G LK+A  +
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +N  +P + TYN L+N +C  G  + A  L   M    +  DV TYN  I+    
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + RS +A+ L+ ++ +  I PN VT+N +I  + KEGKI  A ++   M +   SP+CVT
Sbjct: 316 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 375

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN-----------------------TITLN 224
           YN LI  +C  G+ EEA R++D M   GL++N                         T N
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCN 435

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++ +LC + KL EA   L   S+ G   + ++Y  +I GY        A   +D+M + 
Sbjct: 436 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKC 495

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              PS FTY +++ GL + G   +A   LN L       D   +NT++   C  G + +A
Sbjct: 496 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEA 555

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLIS 403
           +   +KMV+ +  PD  T + LL+GLCR+G    A+  F + + +G    + V Y  L+ 
Sbjct: 556 VALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVD 615

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            L K    + AF    EM +K   PD   + AI  +    G++ +A  F S M   G   
Sbjct: 616 GLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG--- 672

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
              V PN +           +Y+  ++    +      L ++    ++GI  +K T+ +L
Sbjct: 673 ---VCPNLA-----------TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 718

Query: 524 MNGLIK 529
           + GL K
Sbjct: 719 ILGLSK 724



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 271/575 (47%), Gaps = 56/575 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTYNT+++   K+GK+     + ++M K  L PN  TYN L+ G+C +G  +EA+R+
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395

Query: 68  VD-----------------------LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK 104
           +D                       +M  N    D +T N+L++  C  G L EA +   
Sbjct: 396 LDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 455

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
            M  + L+P+ +TY+ +IN +   G  + AF   D++ + G  P+  T+  ++K  CK G
Sbjct: 456 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 515

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
            + +A K +  +     + D V YNTL+   CK+GN+ EA  + D M +  +  ++ T +
Sbjct: 516 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 575

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRG-YYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           ++L  LC + K   A  L  +A  RG  + + V Y  L+ G  +      A   ++EM +
Sbjct: 576 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 635

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           +   P T  +NA+I   S+ G+  +A D  + +   G+ P+  T+N ++HGF  +  + +
Sbjct: 636 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLR 695

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV---------- 393
            L  ++ M+ +   PD +T + L+ GL + GI +  +K     I++   V          
Sbjct: 696 YLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGV 755

Query: 394 --DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ- 450
                 Y TLI+ +C+   ++ AF L  EME    G      +A+   L+  G+ E+A  
Sbjct: 756 IPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAML 815

Query: 451 ---------------KFTSIMVETGKINHQVVQPNTSKTPEEI---DPSSISYSEKINEH 492
                           FT++M    + + ++ +    K   E+       ++Y+  I   
Sbjct: 816 VLDHMLRMRLLPTIATFTTLMHRFCR-DAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 874

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           C+ G    A +++EE R + +  N +TY  L++ +
Sbjct: 875 CANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 909



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 232/460 (50%), Gaps = 31/460 (6%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           S+P V  +++LI  +   GM++ A    + +  +   P V T N ++    +  R+   +
Sbjct: 161 SIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L  E+ + GI PN  T NI+I   C EG + KA  +++ MEENGF P  VTYNTL++  
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK G  + A  ++D M  KG++ +  T N  +  LC   +  +AY+LL    K     +E
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y TLI G+ ++ K   A ++++EM +  + P+  TYNA+I G    G  E+A+ +L+ 
Sbjct: 339 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 398

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +  +G+  +E             G V +A++ +  M       D  TCN+L+S LCR+G 
Sbjct: 399 MEAAGLRLNE------------HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 446

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           L +A KF       G   +S+TY+ +I+         +AF    +M +    P  +TY +
Sbjct: 447 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 506

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L + G L EA+KF + +       H +        P  +D  S+ Y+  + E C  
Sbjct: 507 LLKGLCKGGNLVEAKKFLNRL-------HYI--------PGAVD--SVMYNTLLAETCKS 549

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           G   +A+ +F++  Q  +  +  TY +L+ GL ++ K+++
Sbjct: 550 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 589



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 233/517 (45%), Gaps = 40/517 (7%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           + +++L+  Y K G +  A+   +L+      P V+T NM++         E  + L +E
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M    + P+V T+N LIN     G   +A  L+ +++E+G  P  VT+N ++ WYCK+G+
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
              A +++  M   G   D  TYN  ID  C      +A+ ++  M ++ +  N +T NT
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM---- 281
           +++    E K+  A  + N  SK     + V+Y  LI G+        AL+L D M    
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403

Query: 282 -------------KERQIM------PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
                        K   +M         FT N ++  L + GK  +A   L  + + G++
Sbjct: 404 LRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 463

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T++ II+G+ S G    A  F + M++    P   T   LL GLC+ G L +A KF
Sbjct: 464 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 523

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
                    AVDSV YNTL++  CK   L +A  L  +M +  + PD YTY+++ T L  
Sbjct: 524 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 583

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G+   A                V    T+     + P+ + Y+  ++     G  K A 
Sbjct: 584 KGKAVTA----------------VCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 627

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
             FEE  +KG   +   +  +++    RR  + KA D
Sbjct: 628 YFFEEMMKKGTCPDTVAFNAIIDS-CSRRGQMMKAND 663



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 227/503 (45%), Gaps = 48/503 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D+ T N ++ +L + GKL E    L  M + GLVPN  TY+ +++GY  +G    A    
Sbjct: 430 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 489

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M +    P  +TY  L+ G C  G L EA +    +  +    D V YNTL+    +S
Sbjct: 490 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 549

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-IDKACKIVRNMEENGFSPDCVT 187
           G   EA  L D++ ++ + P++ T++ ++   C++GK +   C     M      P+ V 
Sbjct: 550 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 609

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D   KAG+ + AF   + M +KG   +T+  N I+ +     ++ +A    ++  
Sbjct: 610 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 669

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT- 306
             G   +  +Y  L+ G+ + +   R L L+  M    I P   T++++I GLS+SG   
Sbjct: 670 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 729

Query: 307 -----------EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
                      E++  +L+E+L++G+IP    + T+I+G C  G ++ A +  ++M    
Sbjct: 730 LGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 789

Query: 356 FK-----------------------------------PDIVTCNILLSGLCREGILEKAL 380
           F                                    P I T   L+   CR+  + +AL
Sbjct: 790 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 849

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           K      L G  +D V YN LI  +C       AF L  EM  + L P+  TYA +  A+
Sbjct: 850 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 909

Query: 441 VESGRLEEAQKFTSIMVETGKIN 463
             +  L + +K  + + E G I+
Sbjct: 910 SAANNLIQGEKLLTDLQERGLIS 932



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 197/432 (45%), Gaps = 13/432 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY ++L  L K G L E +  L+ +       +   YN L++  CK G L EA+ +
Sbjct: 499 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 558

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYNTLINRFF 126
            D M QN  LPD +TY+ L+ G C  G    A  L    M    L P+ V Y  L++   
Sbjct: 559 FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 618

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++G    AF   +E+ + G  P+ V  N +I    + G++ KA      M   G  P+  
Sbjct: 619 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 678

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC------------CEK 234
           TYN L+    K   +     +   M R+G+  + +T ++++  L              + 
Sbjct: 679 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 738

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            ++E+ ++L+   + G       Y TLI G  R      A KL DEM+           +
Sbjct: 739 IMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 798

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           AM+ GL   GKTE A+ +L+ +L+  ++P   TF T++H FC + ++ +AL+    M   
Sbjct: 799 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 858

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             K D+V  N+L+ G+C  G    A + +     +    +  TY  L+ ++     L   
Sbjct: 859 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 918

Query: 415 FGLLSEMEEKKL 426
             LL++++E+ L
Sbjct: 919 EKLLTDLQERGL 930



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 147/318 (46%), Gaps = 23/318 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V +N I+D+  ++G++ +  D  S M+  G+ PN  TYNIL+ G+ K   L   
Sbjct: 637 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 696

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M +    PD  T++ LI G   +G+ +   +L  +M        ++  +T++  
Sbjct: 697 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM--------IMEESTVV-- 746

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                        + E+ E+G+ P    +  +I   C+ G I  A K+   ME  GF   
Sbjct: 747 -------------LHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSH 793

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V  + ++      G  E+A  ++D M R  L     T  T++H  C + K+ EA  L  
Sbjct: 794 EVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKG 853

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G  LD V+Y  LI G   +  +  A +L++EM+ R + P+  TY  ++  +S + 
Sbjct: 854 VMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAAN 913

Query: 305 KTEQAIDMLNELLQSGMI 322
              Q   +L +L + G+I
Sbjct: 914 NLIQGEKLLTDLQERGLI 931


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 233/444 (52%), Gaps = 1/444 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLS-DMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP  + +  +L A+ K G+  +V   LS  M+  GL PN  T +I ++ +C+L  +    
Sbjct: 89  LPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGF 148

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+  + +    P + T+  LING C  G   +A  L  +M +    PDV TYNT+IN  
Sbjct: 149 SVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGL 208

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G +  A  L+ +++E G +PN VT++ +I   C++  +++A  I   M+  G SPD 
Sbjct: 209 CKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDI 268

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY +LI   CK    +EA  +++ M    +  + +T N ++ T C E K+ EA  +L +
Sbjct: 269 FTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKT 328

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++ G   + V+Y +L+ GY        A KL+  M  +   P+ F+YN +I G  ++ +
Sbjct: 329 MTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR 388

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A+ + NE++  G+ P+  ++NT+IHGFC  G++ +A      M      PD+ T +I
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSI 448

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G C++G L KA + FR+        + V Y  L+ ++CK    +DA  L SE+  + 
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508

Query: 426 LGPDRYTYAAIHTALVESGRLEEA 449
           L P    Y  I   L + G L+EA
Sbjct: 509 LQPHVQLYTTIINGLCKEGLLDEA 532



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 223/442 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T +  ++   +  +++    +L+ + K GL P   T+  L++G CK+G 
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ + D M      PDV+TYN +ING C  G    A  L K+ME     P++VTY+T
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+         EA  +   +   GI P+  T+  +I+  CK  +  +A  ++  M    
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT+N L+D  CK G + EA  ++  M   G++ N +T +++++       + EA 
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   +  SY  LI GY + ++ + A++L++EM  + + P+  +YN +I G 
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGF 418

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK  +A D+   +  +G +PD  T++ ++ GFC +G + KA +    M     KP++
Sbjct: 419 CQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 478

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V   IL+  +C+ G  + A K F    ++G       Y T+I+ LCKE  L++A      
Sbjct: 479 VMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRN 538

Query: 421 MEEKKLGPDRYTYAAIHTALVE 442
           ME     PD  +Y  I   L++
Sbjct: 539 MEADGCPPDEISYNVIIRGLLQ 560



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 223/426 (52%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT+ T+++ L K G+  +  +L  DM  +G  P+  TYN +++G CK+G    
Sbjct: 157 LGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAA 216

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  ++  M +    P++ TY+ LI+  C   ++ EA  +   M++  + PD+ TY +LI 
Sbjct: 217 AAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ 276

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +  R  EA  L++E+    I P+ VT N+++  +CKEGK+ +A  +++ M E G  P
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEP 336

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTY++L+       ++ EA ++  VM  KG K N  + N +++  C  K++DEA  L 
Sbjct: 337 NVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLF 396

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N    +G   + VSY TLI G+ +  K   A  L+  M     +P  FTY+ ++ G  + 
Sbjct: 397 NEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQ 456

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +A  +   +  + + P+   +  ++H  C  G  + A +  +++  +  +P +   
Sbjct: 457 GYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLY 516

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             +++GLC+EG+L++AL+ FR+    G   D ++YN +I  L + +    A  L+ EM +
Sbjct: 517 TTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRD 576

Query: 424 KKLGPD 429
           +    D
Sbjct: 577 RGFIAD 582



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 246/493 (49%), Gaps = 22/493 (4%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEE 98
           +P    +  L+S   K+G   +   V+ L  Q + +   P+++T ++ +N +C    ++ 
Sbjct: 89  LPCIIQFAKLLSAIVKMGQYYDV--VISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDL 146

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
            F +  ++  L L P +VT+ TLIN   + G   +A +L D++   G +P+  T+N +I 
Sbjct: 147 GFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN 206

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
             CK G+   A  +++ MEE G  P+ VTY+TLID+ C+   + EA  +   M  KG+  
Sbjct: 207 GLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISP 266

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           +  T  +++  LC   +  EA  LLN  +      D V++  L+  + ++ K + AL + 
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
             M E  + P+  TY+++++G S      +A  + + ++  G  P+  ++N +I+G+C  
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
            ++++A+Q  N+M+ +   P+ V+ N L+ G C+ G L +A   FR+    G   D  TY
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           + L+   CK+  L  AF L   M+   L P+   Y  +  A+ +SG  ++A+K  S +  
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G      +QP+              Y+  IN  C +G   +AL+ F      G   ++ 
Sbjct: 507 QG------LQPHVQL-----------YTTIINGLCKEGLLDEALEAFRNMEADGCPPDEI 549

Query: 519 TYMNLMNGLIKRR 531
           +Y  ++ GL++ +
Sbjct: 550 SYNVIIRGLLQHK 562



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 192/372 (51%), Gaps = 3/372 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTY+T++D+L +   +NE  D+ S MK +G+ P+  TY  L+ G CK   
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA  +++ MT    +PD+ T+N+L++ +C  G + EA  + K M  + + P+VVTY++
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  +      +EA KL   +   G KPN  ++NI+I  YCK  +ID+A ++   M   G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ V+YNTLI   C+ G + EA  +   M   G   +  T + +L   C +  L +A+
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAF 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +        + V Y  L+    +      A KL+ E+  + + P    Y  +I GL
Sbjct: 464 RLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A++    +   G  PDE ++N II G        +AL    +M ++ F  D+
Sbjct: 524 CKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583

Query: 361 VTCNILLSGLCR 372
             C   LS +C+
Sbjct: 584 RPC---LSEVCQ 592



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 170/368 (46%), Gaps = 18/368 (4%)

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA-FRMMDVMGRKGLKMNTITLN 224
           ID A     +M      P  + +  L+ A  K G   +    +   M   GL  N  TL+
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
             ++  C  +++D  + +L    K G     V++ TLI G  +  +  +A++L+D+M  +
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P  +TYN +I GL + G+T  A  +L ++ ++G  P+  T++T+I   C +  V +A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L   + M  K   PDI T   L+ GLC+    ++A              D VT+N L+ +
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            CKE ++ +A G+L  M E  + P+  TY+++         + EA+K   +M+  G    
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKG---- 368

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                          P+  SY+  IN +C   R  +A+Q+F E   +G+  N  +Y  L+
Sbjct: 369 -------------CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLI 415

Query: 525 NGLIKRRK 532
           +G  +  K
Sbjct: 416 HGFCQLGK 423


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 204/368 (55%), Gaps = 2/368 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ VTYNT++     +G++    D++ +M+++G + PN+ TY  ++SG+CK+G + EA++
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 576

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V D ++T+ +  P+   YN LI G+C+ G L+ A   R  M    +   V TYN L++  
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F  GR  EA++L++E+   G+ P+  T+NI+I  +CKEG + KA +I  NM   G     
Sbjct: 637 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY  LI A  K G ++E  ++ D   R+G++ + +  N ++++      +D A+ ++  
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+    D+V+Y TL+ G     + + A KL DEM ER I P   TYN +I G S  G 
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 816

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ + NE++  G  P   T+N +I G C  GQ + A     +MVE    PD  T   
Sbjct: 817 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876

Query: 366 LLSGLCRE 373
           L+ GL  E
Sbjct: 877 LIEGLTTE 884



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 223/406 (54%), Gaps = 8/406 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L   GK     +LL  M +    PN  TYN +++G+C  G ++ A+ ++  M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 545

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESG 129
            +   + P+ +TY  +I+GWC  G ++EA ++  EM +  ++ P+ V YN LI  + + G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   A    D + E G+     T+N+++     +G+  +A ++V  M   G +PD  TYN
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+ +CK GN+++A  + + M R+G++   +T   +++ L  + ++ E   L + A +R
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V Y  LI  +      +RA ++  EM++++I P   TYN ++ GL   G+ ++A
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +++E+ + G+ PD  T+NT+I G+  +G V+ AL+  N+M+ K F P ++T N L+ G
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC--KERRLED 413
           LC+ G  + A    +  +  G   D  TY +LI  L    ER ++D
Sbjct: 846 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDD 891



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 220/407 (54%), Gaps = 6/407 (1%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L +DM +  L    TT+NI++   C  G    A+ ++  M +    P+  TYN +I G+C
Sbjct: 475 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 530

Query: 92  NAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPN 149
           + G ++ A  + +EM E   + P+  TY T+I+ + + GR  EA K+ DE+   G +KP 
Sbjct: 531 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 590

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           AV +N +I  YC +GK+D A      M E G +    TYN L+ A    G   EA+ +++
Sbjct: 591 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 650

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            MG KGL  +  T N +++  C E  + +A  +  + S+RG     V+Y  LI    +  
Sbjct: 651 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 710

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +     KL+DE   R I P    YNA+I   S SG  ++A +++ E+ +  + PD+ T+N
Sbjct: 711 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 770

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G C  G+V++A +  ++M E+  +PD+VT N L+SG   +G ++ AL+     + K
Sbjct: 771 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 830

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           G     +TYN LI  LCK  + +DA  ++ EM E  + PD  TY ++
Sbjct: 831 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 200/381 (52%), Gaps = 6/381 (1%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C+AG    A  L ++M      P+ VTYNT+I  F   GR   A  ++ E+
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 545

Query: 142 DEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDANCKAG 199
            E G I PN  T+  +I  +CK G++D+A K+   M   G   P+ V YN LI   C  G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A    D M  +G+ M   T N ++H L  + +  EAY L+     +G   D  +Y 
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI G+ ++    +AL++++ M  R +  +  TY A+I+ LS+ G+ ++   + +E ++ 
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD   +N +I+   + G +++A +   +M +K   PD VT N L+ GLC  G +++A
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K       +G   D VTYNTLIS    +  ++DA  + +EM  K   P   TY A+   
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L ++G+ ++A+     MVE G
Sbjct: 846 LCKNGQGDDAENMVKEMVENG 866



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 212/448 (47%), Gaps = 27/448 (6%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N+L+           + RL   M+SL L     + + L++       S  AF L  ++  
Sbjct: 426 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFR 481

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             +     T NIM++  C  GK  +A +++R M      P+ VTYNT+I   C  G ++ 
Sbjct: 482 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQA 537

Query: 204 AFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE-VSYGTL 261
           A  +M  M  R G+  N  T  T++   C   ++DEA  + +    +G    E V Y  L
Sbjct: 538 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 597

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY    K + AL   D M ER +  +  TYN ++  L   G+  +A +++ E+   G+
Sbjct: 598 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 657

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD  T+N +I+G C EG V+KAL+    M  +  +  +VT   L+  L ++G +++  K
Sbjct: 658 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 717

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F   + +G   D V YN LI+S      ++ AF ++ EME+K++ PD  TY  +   L 
Sbjct: 718 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 777

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
             GR++EA+K    M E G                 I P  ++Y+  I+ +  +G  KDA
Sbjct: 778 LLGRVDEARKLIDEMTERG-----------------IQPDLVTYNTLISGYSMKGDVKDA 820

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
           L+I  E   KG      TY  L+ GL K
Sbjct: 821 LRIRNEMMNKGFNPTLLTYNALIQGLCK 848



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 138/275 (50%), Gaps = 37/275 (13%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            TYN ++ ALF  G+  E  +L+ +M  +GL P+  TYNIL++G+CK G +K+A+ + + 
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686

Query: 71  MTQNKSL-----------------------------------PDVWTYNMLINGWCNAGM 95
           M++                                       PD+  YN LIN    +G 
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           ++ AF +  EME  ++ PD VTYNTL+      GR  EA KLIDE+ E GI+P+ VT+N 
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y  +G +  A +I   M   GF+P  +TYN LI   CK G  ++A  M+  M   G
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 216 LKMNTITLNTILHTLCC--EKKLDEAYMLLNSASK 248
           +  +  T  +++  L    E+ +D+  +    A+K
Sbjct: 867 ITPDDSTYISLIEGLTTEDERAIDDERLAAADAAK 901



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 23/259 (8%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L+ +M   ++   T T+N M+  L  +GK  +A+++L ++ +    P+  T+NT+I 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 334 GFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           GFCS G+V+ AL    +M E+    P+  T   ++SG C+ G +++A+K F   + KG+ 
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 393 -VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++V YN LI   C + +L+ A      M E+ +     TY  +  AL   GR  EA +
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G                 + P   +Y+  IN HC +G  K AL+IFE   ++
Sbjct: 648 LVEEMGGKG-----------------LAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690

Query: 512 GIAINKSTYMNLMNGLIKR 530
           G+     TY  L+  L K+
Sbjct: 691 GVRATVVTYTALIYALSKK 709


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 264/525 (50%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V+YN IL  L +KG+++E      +MKK   +PN +TYNI++   CK G L+ A
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETA 428

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V D M      P+V T N++++  C A  L++A  + + ++     PD VTY +LI  
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA+KL +++ +    PNAV +  +I+ + K G+ +   KI   M   G SPD
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +  NT +D   KAG +E+   +   +   G   +  +   ++H L       EAY L  
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G  LD  +Y T+I G+ +  K N+A +L +EMK +   P+  TY ++I GL++  
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     ++++K   P++ T N
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        + +TY+ LI  LCK R+   AF    EM+++
Sbjct: 729 CLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+ +TY  + + L ++G + EA        E G +    +                 
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI----------------- 831

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    +  R  DA ++FEE R KG +I   T + L++ L K
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHK 876



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 264/557 (47%), Gaps = 53/557 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V YN  +D   K GK++       +MK  GLV +  TY  ++   CK   L EA+ +
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M QNK +P  + YN +I G+  AG  E+A+ L +       +P VV+YN +++    
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  EA K  +E+ +  I PN  T+NIMI   CK GK++ A  +   M++ G  P+ +T
Sbjct: 388 KGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            N ++D  CKA  +++A  + + +  K  + + +T  +++  L    ++DEAY L     
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-------------------------- 281
                 + V Y +LI  +F+  +     K+++EM                          
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566

Query: 282 ---------KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
                    K    +P   +Y  +I GL ++G   +A ++   + + G + D   +NT+I
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            GFC  G+V KA Q   +M  K  +P +VT   ++ GL +   L++A   F     KG  
Sbjct: 627 DGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           ++ V Y++LI    K  R+++A+ ++ E+ +K L P+ YT+  +  ALV++  + EA   
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVC 746

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              M +                  +  P+ I+YS  I+  C   ++  A   ++E +++G
Sbjct: 747 FQSMKDL-----------------KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQG 789

Query: 513 IAINKSTYMNLMNGLIK 529
              N  TY  +++GL K
Sbjct: 790 FKPNVFTYTTMISGLAK 806



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 159/608 (26%), Positives = 272/608 (44%), Gaps = 91/608 (14%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG------ 54
           + GFG  P N T   I+ +  K  KL E    +  M+K    P  + Y  L+        
Sbjct: 158 IAGFG--PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215

Query: 55  -----------------------------YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                        + + G +  A+ ++D M  N   PDV  YN+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH- 144
            I+ +  AG ++ A++   EM++  L+ D VTY ++I    ++ R  EA +L + +D++ 
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335

Query: 145 ----------------------------------GIKPNAVTHNIMIKWYCKEGKIDKAC 170
                                             G  P+ V++N ++    ++G++D+A 
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           K    M+++   P+  TYN +ID  CKAG +E A  + D M   GL  N IT+N ++  L
Sbjct: 396 KKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRL 454

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C  ++LD+A  +      +    D V+Y +LI G  R  + + A KL+++M +   +P+ 
Sbjct: 455 CKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA 514

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             Y ++I    + G+ E    + NE+L+ G  PD    NT +      G++EK      +
Sbjct: 515 VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQE 574

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           +    F PD  +  IL+ GL + G   +A + F +   +G  +D+  YNT+I   CK  +
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +  A+ LL EM+ K   P   TY ++   L +  RL+EA     ++ E  K         
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY----MLFEEAK--------- 681

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                + I+ + + YS  I+     GR  +A  I EE  QKG+  N  T+  L++ L+K 
Sbjct: 682 ----SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 737

Query: 531 RKSISKAV 538
            + IS+A+
Sbjct: 738 EE-ISEAL 744



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/574 (26%), Positives = 258/574 (44%), Gaps = 60/574 (10%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YN++L  + +  K N +  +L +M   G  P+  T   +V  + K   L+EA   +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y  LI     +   +    L ++M+ L    +V  + TLI  F   GR 
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+  + ++P+ V +N+ I  + K GK+D A K    M+ NG   D VTY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CKA  + EA  + + M +          NT++       K ++AY LL    ++G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               VSY  +++   R  + + ALK ++EMK+  I P+  TYN MI  L ++GK E A+ 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + +  +G+ P+  T N ++   C   +++ A      +  K+ +PD VT   L+ GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM---------- 421
           R G +++A K +   +   +  ++V Y +LI +  K  R ED   + +EM          
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 422 -----------------------EEKKLG--PDRYTYAAIHTALVESGRLEEAQKFTSIM 456
                                  E K LG  PD  +Y  +   LV++G   EA +    M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 457 VE-------------------TGKIN--HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
            E                   +GK+N  +Q+++   +K  E   P+ ++Y   I+     
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE---PTVVTYGSVIDGLAKI 667

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            R  +A  +FEE + KGI +N   Y +L++G  K
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 116/311 (37%), Gaps = 53/311 (17%)

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y +L+    R  K N   ++ +EM      PS  T   ++    +S K  +A   +  +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            +    P  + +  +I    +    +  L    +M E  +  ++     L+    REG +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 377 EKAL-----------------------------------KFFRSWILKGKAVDSVTYNTL 401
           + AL                                   KFF      G  +D VTY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I  LCK  RL +A  L   M++ K  P  Y Y  +      +G+ E+A          G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           I                 PS +SY+  ++    +G+  +AL+ FEE ++  I  N STY 
Sbjct: 372 I-----------------PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYN 413

Query: 522 NLMNGLIKRRK 532
            +++ L K  K
Sbjct: 414 IMIDMLCKAGK 424


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 221/436 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T N +++       ++    +L+ + K GL P   T+  L++G CK G 
Sbjct: 117 MELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ + D M      PDV+TY  +ING C  G    A  L K+M  +   PDVVTY+T
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +     EA  +   +   GI P  V++  +I+  C   +  +A  ++  M    
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT++ LID  CK GN+ EA  ++  M   G++ N IT N+++H    + ++ EA 
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    RG   D  SY  LI GY   ++ + A +L++EM  + + P+T +Y  +I   
Sbjct: 357 KLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAF 416

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q GK  +A ++  ++  +G +PD  T++ ++ GFC +G + KA +    M     KP++
Sbjct: 417 CQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNL 476

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V   IL+  +C+ G L  A K F    + G   D   Y T+I+ LCKE  L++A     +
Sbjct: 477 VMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRK 536

Query: 421 MEEKKLGPDRYTYAAI 436
           MEE    P+ ++Y  I
Sbjct: 537 MEEDGCPPNEFSYNVI 552



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 246/514 (47%), Gaps = 18/514 (3%)

Query: 7   LPDNVTYNTILDALFK-KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP  + +N +L A+ + +   + V  L   M+  GL PN  T NIL++ +C +  +    
Sbjct: 87  LPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGF 146

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+  + +    P + T+  LING C AG   +A  L  +M +    PDV TY T+IN  
Sbjct: 147 SVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGL 206

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G +  A  LI ++ E G +P+ VT++ +I   CK+  +++A  I   M+  G SP  
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V+Y +LI   C     +EA  M++ M    +  + +T + ++   C E  + EA  +L +
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKT 326

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++ G   + ++Y +L+ GY    +   A KL+D M  R   P  F+Y+ +I G     +
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A  + NE++  G+ P+  ++ T+IH FC  G++ +A +    M    + PD+ T ++
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G C++G L KA + FR+        + V Y  LI S+CK   L  A  L SE+    
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L PD   Y  I   L + G L+EA +    M E G                   P+  SY
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG-----------------CPPNEFSY 549

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           +  I           A+Q+  E R KG   ++ T
Sbjct: 550 NVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 224/470 (47%), Gaps = 18/470 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA-FRLRKEMESLKLLPDVVTYN 119
           + +A+   + M   K LP +  +N L++         +A   L K+ME   L P+  T N
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LIN F         F ++ ++ + G++P  +T   +I   CK G+  +A ++  +M   
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  TY T+I+  CK G    A  ++  MG  G + + +T +T++ +LC ++ ++EA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +    +G     VSY +LI G     +   A  + +EM    IMP   T++ +I  
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + G   +A  +L  + + G+ P+  T+N+++HG+  + +V +A +  + M+ +  KPD
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + + +IL++G C    +++A + F   I +G   ++V+Y TLI + C+  +L +A  L  
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M      PD  TY+ +     + G L +A +    M  T                  + 
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGT-----------------YLK 473

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           P+ + Y+  I+  C  G    A ++F E    G+  +   Y  ++NGL K
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCK 523



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 180/358 (50%), Gaps = 35/358 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY+T++D+L K   +NE  D+ S MK +G+ P   +Y  L+ G C     KEA
Sbjct: 226 GCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEA 285

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
             +++ MT    +PD+ T+++LI+ +C  G + EA  + K M                  
Sbjct: 286 SAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345

Query: 107 --------ESLKLL---------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                   E+ KL          PDV +Y+ LIN +    R  EA +L +E+   G+ PN
Sbjct: 346 YSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            V++  +I  +C+ GK+ +A ++ ++M  NG+ PD  TY+ L++  CK G + +AFR+  
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M    LK N +    ++ ++C    L+ A  L +     G   D   Y T+I G  ++ 
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             + AL+ + +M+E    P+ F+YN +I G  Q     +A+ ++ E+   G + DE T
Sbjct: 526 LLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 162/284 (57%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M     +PD VT++ ++D   K+G + E + +L  M + G+ PN  TYN L+ GY     
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++ D+M      PDV++Y++LING+C    ++EA +L  EM    L P+ V+Y T
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+  EA +L  ++  +G  P+  T++++++ +CK+G + KA ++ R M+   
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V Y  LID+ CK+GN+  A ++   +   GL+ +     TI++ LC E  LDEA 
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
                  + G   +E SY  +I G+ + +  +RA++L  EM+++
Sbjct: 532 EAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 172/364 (47%), Gaps = 17/364 (4%)

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           D    + + ME  G SP+  T N LI+  C   +++  F ++  + + GL+   IT  T+
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           ++ LC   +  +A  L +    RG   D  +Y T+I G  +  +   A  L  +M E   
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P   TY+ +I  L +     +A+D+ + +   G+ P   ++ ++I G CS  + ++A  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             N+M   +  PDIVT ++L+   C+EG + +A    ++    G   + +TYN+L+    
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
            +  + +A  L   M  +   PD ++Y+ +        R++EA++  + M+      HQ 
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI------HQG 401

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           + PNT           +SY+  I+  C  G+ ++A ++F++    G   +  TY  L+ G
Sbjct: 402 LTPNT-----------VSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEG 450

Query: 527 LIKR 530
             K+
Sbjct: 451 FCKQ 454



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 163/386 (42%), Gaps = 54/386 (13%)

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA-FRMMDVMGRKGLKMNTITLN 224
           ID A     +M      P  + +N L+ A  +     +A   +   M   GL  NT TLN
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C  + +D  + +L    K G                                  
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLG---------------------------------- 156

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            + P+  T+  +I GL ++G+  QA+++ ++++  G  PD  T+ TII+G C  G+   A
Sbjct: 157 -LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAA 215

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
                KM E   +PD+VT + L+  LC++ ++ +AL  F     KG +   V+Y +LI  
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK--- 461
           LC   R ++A  +L+EM    + PD  T++ +     + G + EAQ     M E G    
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335

Query: 462 -INHQVVQPNTSKTPEEID--------------PSSISYSEKINEHCSQGRYKDALQIFE 506
            I +  +    S   E ++              P   SYS  IN +C   R  +A Q+F 
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
           E   +G+  N  +Y  L++   +  K
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGK 421



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 18/163 (11%)

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS-EMEEKKLGPDRYTYA 434
           ++ AL  F   + +      + +N L+S++ + R+  DA   LS +ME   L P+  T  
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +         ++      S++ +  K+  Q              P+ I+++  IN  C 
Sbjct: 131 ILINCFC---LMQHVDLGFSVLAKVIKLGLQ--------------PTIITFTTLINGLCK 173

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            G +  AL++F++   +G   +  TY  ++NGL K  ++ + A
Sbjct: 174 AGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA 216


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 264/525 (50%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V+YN IL  L +KG+++E      +MKK   +PN +TYNI++   CK G L+ A
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETA 428

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V D M      P+V T N++++  C A  L++A  + + ++     PD VTY +LI  
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA+KL +++ +    PNAV +  +I+ + K G+ +   KI   M   G SPD
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +  NT +D   KAG +E+   +   +   G   +  +   ++H L       EAY L  
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G  LD  +Y T+I G+ +  K N+A +L +EMK +   P+  TY ++I GL++  
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     ++++K   P++ T N
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        + +TY+ LI  LCK R+   AF    EM+++
Sbjct: 729 CLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+ +TY  + + L ++G + EA        E G +    +                 
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI----------------- 831

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    +  R  DA ++FEE R KG +I   T + L++ L K
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHK 876



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 264/557 (47%), Gaps = 53/557 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V YN  +D   K GK++       +MK  GLV +  TY  ++   CK   L EA+ +
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M QNK +P  + YN +I G+  AG  E+A+ L +       +P VV+YN +++    
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  EA K  +E+ +  I PN  T+NIMI   CK GK++ A  +   M++ G  P+ +T
Sbjct: 388 KGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            N ++D  CKA  +++A  + + +  K  + + +T  +++  L    ++DEAY L     
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-------------------------- 281
                 + V Y +LI  +F+  +     K+++EM                          
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566

Query: 282 ---------KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
                    K    +P   +Y  +I GL ++G   +A ++   + + G + D   +NT+I
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVI 626

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            GFC  G+V KA Q   +M  K  +P +VT   ++ GL +   L++A   F     KG  
Sbjct: 627 DGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           ++ V Y++LI    K  R+++A+ ++ E+ +K L P+ YT+  +  ALV++  + EA   
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVC 746

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              M +                  +  P+ I+YS  I+  C   ++  A   ++E +++G
Sbjct: 747 FQSMKDL-----------------KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQG 789

Query: 513 IAINKSTYMNLMNGLIK 529
              N  TY  +++GL K
Sbjct: 790 FKPNVFTYTTMISGLAK 806



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 160/608 (26%), Positives = 267/608 (43%), Gaps = 91/608 (14%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG------ 54
           + GFG  P N T   I+ +  K  KL E    +  M+K    P  + Y  L+        
Sbjct: 158 IAGFG--PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215

Query: 55  -----------------------------YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                        + + G +  A+ ++D M  N   PDV  YN+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275

Query: 86  LIN----------GW-------------------------CNAGMLEEAFRLRKEMESLK 110
            I+           W                         C A  L EA  L + M+  K
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
            +P    YNT+I  +  +G+  +A+ L++     G  P+ V++N ++    ++G++D+A 
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           K    M+++   P+  TYN +ID  CKAG +E A  + D M   GL  N IT+N ++  L
Sbjct: 396 KKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRL 454

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C  ++LD+A  +      +    D V+Y +LI G  R  + + A KL+++M +   +P+ 
Sbjct: 455 CKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA 514

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             Y ++I    + G+ E    + NE+L+ G  PD    NT +      G++EK      +
Sbjct: 515 VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQE 574

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           +    F PD  +  IL+ GL + G   +A + F +   +G  +D+  YNT+I   CK  +
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGK 634

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +  A+ LL EM+ K   P   TY ++   L +  RL+EA     ++ E  K         
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY----MLFEEAK--------- 681

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                + I+ + + YS  I+     GR  +A  I EE  QKG+  N  T+  L++ L+K 
Sbjct: 682 ----SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 737

Query: 531 RKSISKAV 538
            + IS+A+
Sbjct: 738 EE-ISEAL 744



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 153/574 (26%), Positives = 258/574 (44%), Gaps = 60/574 (10%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YN++L  + +  K N +  +L +M   G  P+  T   +V  + K   L+EA   +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y  LI     +   +    L ++M+ L    +V  + TLI  F   GR 
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+  + ++P+ V +N+ I  + K GK+D A K    M+ NG   D VTY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CKA  + EA  + + M +          NT++       K ++AY LL    ++G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               VSY  +++   R  + + ALK ++EMK+  I P+  TYN MI  L ++GK E A+ 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + +  +G+ P+  T N ++   C   +++ A      +  K+ +PD VT   L+ GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM---------- 421
           R G +++A K +   +   +  ++V Y +LI +  K  R ED   + +EM          
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 422 -----------------------EEKKLG--PDRYTYAAIHTALVESGRLEEAQKFTSIM 456
                                  E K LG  PD  +Y  +   LV++G   EA +    M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 457 VE-------------------TGKIN--HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
            E                   +GK+N  +Q+++   +K  E   P+ ++Y   I+     
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE---PTVVTYGSVIDGLAKI 667

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            R  +A  +FEE + KGI +N   Y +L++G  K
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 18/282 (6%)

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y +L+    R  K N   ++ +EM      PS  T   ++    +S K  +A   +  +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            +    P  + +  +I    +    +  L    +M E  +  ++     L+    REG +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + AL             D V YN  I    K  +++ A+    EM+   L  D  TY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L ++ RL EA +    M +    N QV             P + +Y+  I  +   G
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQ----NKQV-------------PCAYAYNTMIMGYGMAG 354

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +++DA  + E  R+KG   +  +Y N +   + R+  + +A+
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSY-NCILSCLGRKGQVDEAL 395


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 258/510 (50%), Gaps = 27/510 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TY  +++A+ K+ KL E R +L +M ++GLVP+  TYN L+ GYCK G ++ A
Sbjct: 104 GCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAA 163

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++DLM  N   P+  TYN LI G+C    +  A  L  +M   +L P VVTYN+LI+ 
Sbjct: 164 QEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG 223

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A++L++ ++E+G+ P+  T+++ I   CK+G+I++A  +  +++E G   +
Sbjct: 224 QCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKAN 283

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y  LID  CKAG M++A  ++D M  +    N+ T N ++  LC E+K+ EA +L+ 
Sbjct: 284 EVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLME 343

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G      +Y  LI    ++   + A ++ D+M      P  + Y A I      G
Sbjct: 344 SMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRG 403

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A DM++ + + G++PD  T+  +I  +   G +  A     +M +    P   T +
Sbjct: 404 NIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYS 463

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSV--TYNTLISSLCKERRLEDAFGLLSEME 422
            L+  L +E + +K    +++  L     DS+   +   ++ + K  + E A  L  +M 
Sbjct: 464 CLIKHLLKEELTKK----YKNVAL----CDSIPNVFFADVADVWKMMKFETALELFEKML 515

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E    P+  TYA +   L + GRL  AQK    M E G                 + PS 
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERG-----------------VSPSE 558

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             Y+  +N  C  G Y DA+++     + G
Sbjct: 559 AIYNSLLNCCCELGIYGDAVRLVGAMMEHG 588



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 234/488 (47%), Gaps = 26/488 (5%)

Query: 51  LVSGYCKLGWLKE---------AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           +V+GYCKLG L E         A  V ++M +     +  +Y  LI+G C  G ++E   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           + K+M      P V TY  +++  FESGR MEA  L  E+ E G +PN  T+ +MI   C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           KE K+++  +I+  M E G  P   TYN LID  CK G +E A  ++D+M       N  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N ++   C +K +  A  LL+   +       V+Y +LI G  +    + A +L + M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            E  ++P  +TY+  I  L + G+ E+A  + N L + G+  +E  +  +I G+C  G++
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           + A    ++M+ +   P+  T N L+ GLC+E  +++AL    S I KG      TY  L
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I ++ KE   + A  +L +M      PD Y Y A   A    G ++EA+   S+M E G 
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG- 419

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                           + P +++Y+  I+ +   G    A  + +     G   +  TY 
Sbjct: 420 ----------------VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYS 463

Query: 522 NLMNGLIK 529
            L+  L+K
Sbjct: 464 CLIKHLLK 471



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 267/536 (49%), Gaps = 18/536 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  + V+Y  ++  L + G+++E  ++   M++    P   TY ++V    + G   EA
Sbjct: 34  GCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEA 93

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M +    P++ TY ++IN  C    LEE  R+  EM    L+P V TYN LI+ 
Sbjct: 94  INLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDG 153

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G    A +++D +  +   PN  T+N +I  +C++  + +A  ++  M E+  +P 
Sbjct: 154 YCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPS 213

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+LI   CK G ++ A+R++++M   G+  +  T +  + TLC + +++EA +L N
Sbjct: 214 VVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFN 273

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G   +EV Y  LI GY +  K + A  L D M     +P++ TYNA+I GL +  
Sbjct: 274 SLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKER 333

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A+ ++  ++Q G+     T+  +I     EG  + A +  ++MV   ++PD+    
Sbjct: 334 KVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYT 393

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             +   C  G +++A         +G   D++TY  +I +      L  AF +L  M + 
Sbjct: 394 AFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT 453

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN------HQVVQPNTSKTPEEI 478
              P  +TY+ +   L++    E  +K+ ++ +     N        V +    +T  E+
Sbjct: 454 GCDPSHHTYSCLIKHLLKE---ELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALEL 510

Query: 479 ---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                     P+  +Y++ I   C  GR   A ++F+   ++G++ +++ Y +L+N
Sbjct: 511 FEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 248/516 (48%), Gaps = 12/516 (2%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
           +N    + + M K+G   N  +Y  L+ G C++G + E + +   M ++   P V TY +
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           +++    +G   EA  L  EM      P++ TY  +IN   +  +  E  +++DE+ E G
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+  T+N +I  YCKEG ++ A +I+  M  N  +P+  TYN LI   C+  N+  A 
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M    L  + +T N+++H  C    LD AY LLN  ++ G   D+ +Y   I   
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTL 259

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +  +   A  L++ +KE+ I  +   Y A+I G  ++GK + A  +L+ +L    +P+ 
Sbjct: 260 CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS 319

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           +T+N +I G C E +V++AL     M++K  K  + T  IL+  + +EG  + A +    
Sbjct: 320 STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +  G   D   Y   I + C    +++A  ++S M E+ + PD  TY  +  A    G 
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439

Query: 446 LEEAQKFTSIMVETG----------KINHQVVQPNTSKTPEEIDPSSIS--YSEKINEHC 493
           L  A      M +TG           I H + +  T K        SI   +   + +  
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVW 499

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +++ AL++FE+  + G + N +TY  L+ GL K
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCK 535



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 207/495 (41%), Gaps = 64/495 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C P+  TYN ++    +K  ++    LLS M +  L P+  TYN L+ G CK+G+
Sbjct: 170 MHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGY 229

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A R+++LM +N  +PD WTY++ I+  C  G +EEA                   N 
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEA-------------------NV 270

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L N   E G                IK N V +  +I  YCK GK+D A  ++  M    
Sbjct: 271 LFNSLKEKG----------------IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN LID  CK   ++EA  +M+ M +KGLK    T   ++  +  E   D A+
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+     GY  D   Y   I  +        A  +   M ER +MP   TY  +I   
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG--------------------- 339
              G    A D+L  +  +G  P   T++ +I     E                      
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFAD 494

Query: 340 --------QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
                   + E AL+   KM+E    P+I T   L+ GLC+ G L  A K F     +G 
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           +     YN+L++  C+     DA  L+  M E    P   +   +   L E G  E+A+ 
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614

Query: 452 FTSIMVETGKINHQV 466
             S +++ G  + +V
Sbjct: 615 VFSNLLQCGYNDDEV 629



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 191/430 (44%), Gaps = 29/430 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  TY+  +D L KKG++ E   L + +K++G+  N   Y  L+ GYCK G + +A
Sbjct: 244 GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDA 303

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D M     LP+  TYN LI+G C    ++EA  L + M    L   V TY  LI  
Sbjct: 304 NSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVA 363

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A +++D++   G +P+   +   I  +C  G I +A  ++  M E G  PD
Sbjct: 364 MLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK---------- 234
            +TY  +IDA    G +  AF ++  M   G   +  T + ++  L  E+          
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVAL 483

Query: 235 -------------------KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
                              K + A  L     + G   +  +Y  LI G  +  +   A 
Sbjct: 484 CDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQ 543

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           KL+D M ER + PS   YN+++    + G    A+ ++  +++ G +P   + N +  G 
Sbjct: 544 KLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGL 603

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
             EG  EKA    + +++  +  D V   IL+ GL + G+ +   +       +G  +  
Sbjct: 604 YEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHP 663

Query: 396 VTYNTLISSL 405
            TY  LI  L
Sbjct: 664 QTYRMLIEGL 673



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 169/351 (48%), Gaps = 26/351 (7%)

Query: 191 LIDANCKAGNMEEA---------FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +++  CK GN+ EA         F + ++M +KG + N ++   ++H LC   ++DE   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +     +   Y    +Y  ++   F   +   A+ L+ EM+ER   P+  TY  MI  + 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +  K E+   +L+E+++ G++P   T+N +I G+C EG VE A +  + M   S  P+  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+ G CR+  + +A+      +        VTYN+LI   CK   L+ A+ LL+ M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E  + PD++TY+     L + GR+EEA    + + E G                 I  +
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG-----------------IKAN 283

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            + Y+  I+ +C  G+  DA  + +    +    N STY  L++GL K RK
Sbjct: 284 EVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK 334


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 234/455 (51%), Gaps = 5/455 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D  T   ++++     +++    +L+ + K G  P+  T+  L+ G C  G 
Sbjct: 100 MDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGK 159

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      P+  TY  LI+G C  G    A RL + M      P+V+TYNT
Sbjct: 160 IGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNT 219

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+  F+  +  EA  +  E+   GI PN  T+N +I   CK  +      ++  M ++ 
Sbjct: 220 IIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK 279

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V + TL+DA CK G +  A  ++DVM ++G++ + +T   ++   C   ++DEA 
Sbjct: 280 IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEAD 339

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++  ++G   + +SY TLI GY + ++ ++A+ L++EM +R+++P+  TYN +I GL
Sbjct: 340 KVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   AI + +E++ SG IPD  T+  ++   C    +++A+     +   +  PDI
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + NI++ G+CR G LE A   F S   KG   D  TY  +I+ LC +  L +A  L  E
Sbjct: 460 QSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFRE 519

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           M      PD  TY      L+  G L   +  ++I
Sbjct: 520 MNTDGCSPDDCTY-----NLITRGFLRNNETLSAI 549



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 228/465 (49%), Gaps = 10/465 (2%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ E   L   M  +G  PN  TY  L+ G CK+G  + 
Sbjct: 138 LGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRA 197

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    P+V TYN +I+       + EA  +  EM +  + P+V TYN++I+
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIH 257

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +         L++E+ +  I PN V    ++   CKEG +  A  +V  M + G  P
Sbjct: 258 GLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY  L+D +C    M+EA ++ D M RKG   N I+ +T+++  C  +++D+A  L 
Sbjct: 318 DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLF 377

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               +R    + V+Y TLI G     +   A+ L+ EM     +P   TY  ++  L ++
Sbjct: 378 EEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKT 437

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              +QA+ ML  +  S + PD  ++N +I G C  G++E A    + +  K   PD+ T 
Sbjct: 438 RHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTY 497

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            I+++GLC +G+L +A K FR     G + D  TYN +     +      A  LL EM  
Sbjct: 498 TIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLG 557

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           +    D  T   I   L + G L+++ K         +I H+ VQ
Sbjct: 558 RGFSADASTITLIVEMLSDDG-LDQSVK---------QILHEFVQ 592



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 218/445 (48%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +  IL ++      + V  L   M   G+  +  T  I+++ +C L  +     V
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+  LI G C  G + EA  L  +M      P+ VTY TLI+   +
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G S  A +L+  + +   +PN +T+N +I    K+ ++++A  I   M   G SP+  T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN++I   CK    +    +M+ M    +  N +   T++  LC E  +  A+ +++   
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RG   D V+Y  L+ G+    + + A K++D M  +   P+  +Y+ +I G  +  + +
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E+ Q  ++P+  T+NT+IHG C  G++  A+   ++MV     PD+VT  ILL
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L++A+   ++      A D  +YN +I  +C+   LE A  L S +  K L 
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491

Query: 428 PDRYTYAAIHTALVESGRLEEAQKF 452
           PD +TY  +   L   G L EA K 
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKL 516



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 232/494 (46%), Gaps = 20/494 (4%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+   + M   +  P V  +  ++    N         L K+M+SL +  DV T   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F    R    F ++ ++ + G +P+  T   +I+  C EGKI +A  +   M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+ VTY TLI   CK GN   A R++  M +K  + N IT NTI+  L  +++++EA 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +    +G   +  +Y ++I G  +  +      L +EM + +IMP+   +  ++  L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G    A D+++ ++Q G+ PD  T+  ++ G C   ++++A +  + MV K   P++
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++ + L++G C+   ++KA+  F     +    + VTYNTLI  LC   RL DA  L  E
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN---------- 470
           M      PD  TY  +   L ++  L++A       +E   +   +   N          
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK-AIEGSNLAPDIQSYNIVIDGMCRVG 473

Query: 471 ---------TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                    +S + + + P   +Y+  IN  C QG   +A ++F E    G + +  TY 
Sbjct: 474 ELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYN 533

Query: 522 NLMNGLIKRRKSIS 535
            +  G ++  +++S
Sbjct: 534 LITRGFLRNNETLS 547



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 18/454 (3%)

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
           N   ++EA      M  ++  P VV +  ++              L  ++D  GI  +  
Sbjct: 51  NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T  I+I  +C   ++D    ++  + + G  PD  T+ TLI   C  G + EA  + D M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             +G + N +T  T++H LC       A  LL S  ++    + ++Y T+I   F+D + 
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           N AL ++ EM  + I P+  TYN++I GL +  + +    ++NE++ S ++P+   F T+
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +   C EG V  A    + M+++  +PD+VT   L+ G C    +++A K F + + KG 
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           A + ++Y+TLI+  CK +R++ A  L  EM +++L P+  TY  +   L   GRL +A  
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 452 FTSIMVETGKI----NHQVVQPNTSKTPE--------------EIDPSSISYSEKINEHC 493
               MV +G+I     ++++     KT                 + P   SY+  I+  C
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             G  + A  +F     KG+  +  TY  ++NGL
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 1/171 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PD VTY  +LD L K   L++   +L  ++   L P+  +YNI++ G C++G 
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +   ++     PDVWTY ++ING C  G+L EA +L +EM +    PD  TYN 
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
           +   F  +  ++ A +L+ E+   G   +A T  ++++    +G +D++ K
Sbjct: 535 ITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG-LDQSVK 584



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 66/141 (46%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG    PD  +YN ++D + + G+L    DL S +  +GL P+  TY I+++G C  G 
Sbjct: 450 IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++   M  +   PD  TYN++  G+        A +L +EM       D  T   
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITL 569

Query: 121 LINRFFESGRSMEAFKLIDEL 141
           ++    + G      +++ E 
Sbjct: 570 IVEMLSDDGLDQSVKQILHEF 590


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/587 (26%), Positives = 272/587 (46%), Gaps = 87/587 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD      ++  L ++G+ ++   +L   ++ G   +   YN LV+GYC+ G L  A R+
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      PD +TY  +I G C+ G + EA  L  +M      P VVTY  L+    +
Sbjct: 136 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S    +A +++DE+   G  PN VT+N++I   C+EG++D A + +  +   GF PD V+
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252

Query: 188 YNT-----------------------------------LIDANCKAGNMEEAFRMMDVMG 212
           Y T                                   L+   C+ G +E A ++++ M 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             G   NT   N +++T+C + ++D+A+  LN+    G   D +SY T++ G  R E+  
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A +L  EM  +   P+  T+N  I  L Q G  EQA  ++ ++ + G   +  T+N ++
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432

Query: 333 HGFCSEGQVEKALQ-FHN-------------------------------KMVEKSFKPDI 360
           +GFC +G+V+ AL+ F++                               +M++K   P++
Sbjct: 433 NGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L+S  C++G++++A++     +  G   + +TYNTL+  +  +   E+A  LL  
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHG 552

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +    + PD  TY++I   L    R+EEA K   I+ + G                 + P
Sbjct: 553 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG-----------------MRP 595

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++ Y++ +   C +     A+  F      G   N+ TY+ L+ GL
Sbjct: 596 KAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 251/514 (48%), Gaps = 23/514 (4%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  L  L  +  L E   L+     +G  P+      L+   C+ G   +A RV+    +
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
           + +  DV+ YN L+ G+C  G L+ A RL   + S+ + PD  TY  +I    + GR  E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  L+D++   G +P+ VT+ ++++  CK     +A +++  M   G +P+ VTYN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C+ G +++A   ++ +   G + +T++  T+L  LC  K+ ++   L     ++    
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           +EV++  L+  + R     RA+++ ++M       +T   N +I  + + G+ + A   L
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           N +   G  PD  ++ T++ G C   + E A +   +MV K+  P+ VT N  +  LC++
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++E+A          G  V+ VTYN L++  C + R++ A  L   M  K   P+  TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             + T L  + RL+ A +  + M++                 ++  P+ ++++  ++  C
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQ-----------------KDCAPNVVTFNVLVSFFC 503

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +G   +A+++ E+  + G   N  TY  L++G+
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 242/468 (51%), Gaps = 3/468 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN I++ + ++G++++ R+ L+ +   G  P+  +Y  ++ G C    
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++   +   M +   +P+  T++ML+  +C  GM+E A ++ ++M       +    N 
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR  +AF+ ++ +  +G  P+ +++  ++K  C+  + + A ++++ M    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT I   C+ G +E+A  +++ M   G ++N +T N +++  C + ++D A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S   +    + ++Y TL+TG    E+ + A +L  EM ++   P+  T+N ++   
Sbjct: 446 ELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  ++AI+++ ++++ G  P+  T+NT++ G  ++   E+AL+  + +V     PDI
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + ++  L RE  +E+A+K F      G    +V YN ++ +LCK    + A    + 
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L     L+E +     +   G +N  +++
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLE 670


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 237/463 (51%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+ ++YNT++ +L    +  E  D++  M K+G    P+  ++N ++ G+ K 
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G + +A  +++ M Q    PDV TYN +++  C A  +++A  + ++M    + PD +TY
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
             +I+ +  SG   E+ K+  ++   G+ P  VT N  +   CK G+   A +I + M  
Sbjct: 338 TAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTT 397

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD V+Y+ L+      G   +   +   M  KG+  N    N ++        +DE
Sbjct: 398 KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDE 457

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++      +G   D V+Y TLI+ + R  +   A++ + +M    + P+T  Y+++I 
Sbjct: 458 AMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIH 517

Query: 299 GLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           G    G   +A ++++E++  G+  P+   F++IIH  C+EG+V  A    N ++    +
Sbjct: 518 GFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDR 577

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P IVT N L+ G C  G +EKA     + +  G   D VTYNTL+S  CK  +++D   L
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM  KK+ P   TY+ +   L  +GR   A+K    M+++G
Sbjct: 638 FREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 267/567 (47%), Gaps = 63/567 (11%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG  C PD V++NT++   FK+G++++  +L+++M ++G+ P+  TYN +V   CK   +
Sbjct: 256 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAM 315

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  V+  M      PD  TY  +I+G+  +G  +E+ ++ ++M S  L+P +VT+N+ 
Sbjct: 316 DKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSF 375

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK---------------- 165
           ++   + GRS +A ++   +   G  P+ V+++I++  Y  EG+                
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435

Query: 166 -------------------IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                              +D+A  +   M+  G  PD VTY+TLI A C+ G + +A  
Sbjct: 436 VANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAME 495

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
               M   GL+ NT+  ++++H  C    L +A  L++    +G     + + + I    
Sbjct: 496 KFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSL 555

Query: 267 RDE----KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            +E     A+    L   + +R   P+  T+N++I G    GK E+A  +L+ ++  G+ 
Sbjct: 556 CNEGRVMDAHDVFNLVIHIGDR---PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 612

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+NT++ G+C  G+++  L    +M+ K  KP  VT +I+L GL   G    A K 
Sbjct: 613 PDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   I  G AVD  TY  L+  LC+    ++A  L  ++       D      +  AL +
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYK 732

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             R EEA    + +  +G +      PN S           +Y   I+    +G  ++A 
Sbjct: 733 VRRREEANDLFAAISTSGLV------PNVS-----------TYGVMIHNLLKEGSVEEAD 775

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
            +F    + G A +      L+N +I+
Sbjct: 776 TMFSSMEKSGCAPSS----RLLNDIIR 798



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 263/557 (47%), Gaps = 56/557 (10%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-DL 70
           TY  ++D   +  + +      + + + GL       N  +   C      EA+ V+   
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINRFFES 128
           M+    +P+  +YN +I   C     +EA  + + M  E  +  PDVV++NT+I+ FF+ 
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +A  LI+E+ + G++P+ VT+N ++   CK   +DKA  ++R M + G  PD +TY
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             +I     +G+ +E+ +M   M  KGL    +T N+ + +LC   +  +A  +    + 
Sbjct: 338 TAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTT 397

Query: 249 RGYYLDEVSYGTLITGY-----FRD-------------------------EKANR----- 273
           +G+  D VSY  L+ GY     F D                           A R     
Sbjct: 398 KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDE 457

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A+ ++ EM+ + + P   TY+ +I    + G+   A++  ++++  G+ P+   ++++IH
Sbjct: 458 AMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIH 517

Query: 334 GFCSEGQVEKALQFHNKMVEKSF-KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           GFC  G + KA +  ++M+ K   +P+IV  + ++  LC EG +  A   F   I  G  
Sbjct: 518 GFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDR 577

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
              VT+N+LI   C   ++E AFG+L  M    + PD  TY  + +   +SG++++    
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG--- 634

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              ++   ++ H+ V+P T           ++YS  ++     GR   A ++F E    G
Sbjct: 635 ---LILFREMLHKKVKPTT-----------VTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680

Query: 513 IAINKSTYMNLMNGLIK 529
            A++  TY  L+ GL +
Sbjct: 681 TAVDIDTYKILLKGLCR 697



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 234/455 (51%), Gaps = 1/455 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P  VT+N+ + +L K G+  +  ++   M  +G +P+  +Y+IL+ GY   G 
Sbjct: 360 MTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGR 419

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   +   M     + +   +N+LI+     GM++EA  +  EM+   + PDVVTY+T
Sbjct: 420 FADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYST 479

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   GR  +A +   ++   G++PN V ++ +I  +C  G + KA ++V  M   G
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKG 539

Query: 181 FS-PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+ V ++++I + C  G + +A  + +++   G +   +T N+++   C   K+++A
Sbjct: 540 IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 599

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + +L++    G   D V+Y TL++GY +  K +  L L+ EM  +++ P+T TY+ ++ G
Sbjct: 600 FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDG 659

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L  +G+T  A  M +E++ SG   D  T+  ++ G C     ++A+   +K+     K D
Sbjct: 660 LFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFD 719

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   N +++ L +    E+A   F +    G   +  TY  +I +L KE  +E+A  + S
Sbjct: 720 ITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFS 779

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            ME+    P       I   L++ G + +A  + S
Sbjct: 780 SMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMS 814



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 1/449 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD V+Y+ +L     +G+  ++ +L   M  +G+V N   +NIL+S + K G + EA
Sbjct: 399 GHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEA 458

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M      PDV TY+ LI+ +C  G L +A     +M S+ L P+ V Y++LI+ 
Sbjct: 459 MLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHG 518

Query: 125 FFESGRSMEAFKLIDELDEHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
           F   G  ++A +L+ E+   GI +PN V  + +I   C EG++  A  +   +   G  P
Sbjct: 519 FCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRP 578

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VT+N+LID  C  G ME+AF ++D M   G++ + +T NT++   C   K+D+  +L 
Sbjct: 579 TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILF 638

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +      V+Y  ++ G F   + + A K++ EM +        TY  ++ GL ++
Sbjct: 639 REMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 698

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
             T++AI + ++L       D T  NT+I+      + E+A      +      P++ T 
Sbjct: 699 DLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTY 758

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +++  L +EG +E+A   F S    G A  S   N +I  L ++  +  A   +S+++ 
Sbjct: 759 GVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDG 818

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             +  +  T + + +     G+  E  KF
Sbjct: 819 TIISLEASTTSLLMSLFSSKGKHREQIKF 847



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 1/384 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G  PD VTY+T++ A  + G+L +  +  S M   GL PN   Y+ L+ G+C  G 
Sbjct: 465 MQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGD 524

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  +V ++M++    P++  ++ +I+  CN G + +A  +   +  +   P +VT+N
Sbjct: 525 LVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFN 584

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +LI+ +   G+  +AF ++D +   GI+P+ VT+N ++  YCK GKID    + R M   
Sbjct: 585 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHK 644

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P  VTY+ ++D    AG    A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 645 KVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 704

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L +         D     T+I   ++  +   A  L+  +    ++P+  TY  MI  
Sbjct: 705 ITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHN 764

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  E+A  M + + +SG  P     N II     +G + KA  + +K+       +
Sbjct: 765 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLE 824

Query: 360 IVTCNILLSGLCREGILEKALKFF 383
             T ++L+S    +G   + +KF 
Sbjct: 825 ASTTSLLMSLFSSKGKHREQIKFL 848



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/355 (20%), Positives = 145/355 (40%), Gaps = 65/355 (18%)

Query: 194 ANCKAGNM--EEAFRMMDVMGRKGLKMNTITLNTILHTLC-------CEKKLDEAYMLLN 244
           A  +AG    ++A  + D + R+G  ++   LN  L  L        C         L N
Sbjct: 81  ARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFN 140

Query: 245 -----SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                 A  R   L   +YG L+    R  + +     +  +    +   T   N  +  
Sbjct: 141 RICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKC 200

Query: 300 LSQSGKTEQAID-MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           L  + +T++A+D +L+ +   G +P+  ++NT+I   C + + ++AL    +M ++    
Sbjct: 201 LCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEG--- 257

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                     G C                      D V++NT+I    K+  +  A  L+
Sbjct: 258 ----------GRCSP--------------------DVVSFNTVIHGFFKQGEVSKACNLI 287

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +EM +K + PD  TY +I  AL ++  +++A+     MV+ G                 +
Sbjct: 288 NEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG-----------------V 330

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +P  ++Y+  I+ +   G +K++ ++F +   KG+     T+ + M+ L K  +S
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS 385


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 240/472 (50%), Gaps = 19/472 (4%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLS---------------DMKKQGLVPNRTTY 48
            G  PD VT+NT+L  L  + +++E   L                  M + GL P   T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N L++G C  G + EA  +V+ M       DV TY  ++NG C  G  + A  L  +ME 
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + PDVV Y+ +I+R  + G   +A  L  E+ E GI PN  T+N MI  +C  G+   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +++R+M E   +PD +T+N LI A+ K G + EA ++ D M  + +  +T+T N++++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C   + D+A  + +  +      D V++ T+I  Y R ++ +  ++L  E+  R ++ 
Sbjct: 410 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +T TYN +I G  +      A D+  E++  G+ PD  T N +++GFC   ++E+AL+  
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             +       D V  NI++ G+C+   +++A   F S  + G   D  TYN +IS  C +
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             + DA  L  +M++    PD  TY  +    +++G ++++ +  S M   G
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 229/449 (51%), Gaps = 5/449 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  +T+NT+++ L  +G++ E   L++ M  +GL  +  TY  +V+G CK+G 
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K A+ ++  M +    PDV  Y+ +I+  C  G   +A  L  EM    + P+V TYN 
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F   GR  +A +L+ ++ E  I P+ +T N +I    KEGK+ +A K+   M    
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN++I   CK    ++A  M D+M       + +T NTI+   C  K++DE  
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 452

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   S+RG   +  +Y TLI G+   +  N A  L+ EM    + P T T N +++G 
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ K E+A+++   +  S +  D   +N IIHG C   +V++A      +     +PD+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++SG C +  +  A   F      G   D+ TYNTLI    K   ++ +  L+SE
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M       D +T   +   L+  GRL+++
Sbjct: 633 MRSNGFSGDAFTIKMV-ADLITDGRLDKS 660



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 223/415 (53%), Gaps = 5/415 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D VTY TI++ + K G      +LLS M++  + P+   Y+ ++   CK G 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +   M +    P+V+TYN +I+G+C+ G   +A RL ++M   ++ PDV+T+N 
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+  EA KL DE+    I P+ VT+N MI  +CK  + D A    ++M +  
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLM 427

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VT+NT+ID  C+A  ++E  +++  + R+GL  NT T NT++H  C    L+ A 
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D ++   L+ G+  +EK   AL+L++ ++  +I   T  YN +I G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K ++A D+   L   G+ PD  T+N +I GFC +  +  A    +KM +   +PD 
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T N L+ G  + G ++K+++        G + D+ T   +++ L  + RL+ +F
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 661



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 242/551 (43%), Gaps = 65/551 (11%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  N ++    +  + +    L   M+ + +  N  ++NIL+  +C    L  ++     
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 71  MTQNKSLPDVWTYNMLINGWC----------------NAGMLEEAFRLRKEMESLKLLPD 114
           +T+    PDV T+N L++G C                  G L EA  L  +M  + L P 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPV 225

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V+T+NTLIN     GR +EA  L++++   G+  + VT+  ++   CK G    A  ++ 
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            MEE    PD V Y+ +ID  CK G+  +A  +   M  KG+  N  T N ++   C   
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +  +A  LL    +R    D +++  LI+   ++ K   A KL DEM  R I P T TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 295 AMIWGL-------------------------------SQSGKTEQAIDMLNELLQSGMIP 323
           +MI+G                                 ++ + ++ + +L E+ + G++ 
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           + TT+NT+IHGFC    +  A     +M+     PD +TCNILL G C    LE+AL+ F
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               +    +D+V YN +I  +CK  ++++A+ L   +    + PD  TY  + +     
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
             + +A      M + G                  +P + +Y+  I      G    +++
Sbjct: 586 SAISDANVLFHKMKDNGH-----------------EPDNSTYNTLIRGCLKAGEIDKSIE 628

Query: 504 IFEETRQKGIA 514
           +  E R  G +
Sbjct: 629 LISEMRSNGFS 639



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 209/470 (44%), Gaps = 37/470 (7%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      M   +     V  N +I  F    R   A  L  +++   I  N  + NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF---------- 205
           +IK +C   K+  +      + + GF PD VT+NTL+   C    + EA           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 206 -----RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
                 + D M   GL    IT NT+++ LC E ++ EA  L+N    +G ++D V+YGT
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           ++ G  +      AL L  +M+E  I P    Y+A+I  L + G    A  + +E+L+ G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+  T+N +I GFCS G+   A +    M+E+   PD++T N L+S   +EG L +A 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           K     + +    D+VTYN++I   CK  R +DA  +   M      PD  T+  I    
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID------------------PSS 482
             + R++E  +    +   G + +            E+D                  P +
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+ +  +   C   + ++AL++FE  +   I ++   Y  +++G+ K  K
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 162/308 (52%), Gaps = 6/308 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +T+N ++ A  K+GKL E   L  +M  + + P+  TYN ++ G+CK     +A  +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            DLM      PDV T+N +I+ +C A  ++E  +L +E+    L+ +  TYNTLI+ F E
Sbjct: 424 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                 A  L  E+  HG+ P+ +T NI++  +C+  K+++A ++   ++ +    D V 
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   CK   ++EA+ +   +   G++ +  T N ++   C +  + +A +L +   
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+  D  +Y TLI G  +  + +++++L  EM+        FT   M+  L   G+ +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLD 658

Query: 308 QAI-DMLN 314
           ++  DML+
Sbjct: 659 KSFSDMLS 666



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 32/314 (10%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           K LD+A    +   +   +   V    +I  + R  + + A+ L+ +M+ R+I  + +++
Sbjct: 85  KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I       K   ++    +L + G  PD  TFNT++HG C E ++ +AL     MVE
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 354 KSF---------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
             F                P ++T N L++GLC EG + +A       + KG  +D VTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            T+++ +CK    + A  LLS+MEE  + PD   Y+AI   L + G   +AQ   S M+E
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                 I P+  +Y+  I+  CS GR+ DA ++  +  ++ I  +  
Sbjct: 325 KG-----------------IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367

Query: 519 TYMNLMNGLIKRRK 532
           T+  L++  +K  K
Sbjct: 368 TFNALISASVKEGK 381


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 254/497 (51%), Gaps = 18/497 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y T+LD L K       R +L  M ++G+  +   +  ++  Y + G L+ A+RV+ L
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    P++   N  I        LE+A R  + M+   + PD+VTYN+LI  + +  R
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA-CKIVRNMEENGFSPDCVTYN 189
             +A +LI  L   G  P+ V++  ++ + CKE KI++  C + + ++++   PD VTYN
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI    K G+ ++A   +     KG  ++ +  + I+H+ C + ++DEA  L+     R
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               D V+Y  ++ G+ R  + + A K+  +M +    P+T +Y A++ GL  SGK+ +A
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            +M+N   +    P+  T+  ++HGF  EG++ +A     +MVEK F P  V  N+L+  
Sbjct: 497 REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC+   + +A K+    + KG A++ V + T+I   C+   +E A  +L +M      PD
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPD 616

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY A+  AL + GRL+EA +    M+  G                 +DP+ +++   I
Sbjct: 617 AVTYTALFDALGKKGRLDEAAELIVKMLSKG-----------------LDPTPVTFRSVI 659

Query: 490 NEHCSQGRYKDALQIFE 506
           + +C  GR  D L + +
Sbjct: 660 HRYCQWGRVDDMLNLLD 676



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+    NT +  L K  KL +    L  M+  G+ P+  TYN L+ GYC L  
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           +++A+ ++  +      PD  +Y  ++   C    +E+   L ++M +   L+PD VTYN
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   + G + +A   + E ++ G   + V ++ ++  +C++G++D+A  +V +M   
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +PD VTY  ++D  C+ G ++EA +M+  M + G K NT++   +L+ LC   K  EA
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++YG ++ G+ R+ K + A  L  EM E+   P+    N +I  
Sbjct: 497 REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L Q+ K  +A   L E L  G   +   F T+IHGFC  G +E AL     M   +  PD
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPD 616

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT   L   L ++G L++A +     + KG     VT+ ++I   C+  R++D   LL 
Sbjct: 617 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLD 676

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            M ++K  P R  Y  +   L + G LEEA+K    ++ T 
Sbjct: 677 RMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTA 715



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 200/419 (47%), Gaps = 37/419 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD VTYNT++  L K G  ++    L + + +G   ++  Y+ +V  +C+ G + EA  
Sbjct: 369 IPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKS 428

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +V  M      PDV TY  +++G+C  G ++EA ++ ++M      P+ V+Y  L+N   
Sbjct: 429 LVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 488

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            SG+S+EA ++I+  +EH   PNA+T+ +++  + +EGK+ +AC + R M E GF P  V
Sbjct: 489 HSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPV 548

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
             N LI + C+   + EA + ++    KG  +N +   T++H  C    ++ A  +L   
Sbjct: 549 EINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDM 608

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                + D V+Y  L     +  + + A +L  +M  + + P+  T+ ++I    Q G+ 
Sbjct: 609 YLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRV 668

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK---------------- 350
           +  +++L+ +++    P  T +N +I   C  G +E+A +   K                
Sbjct: 669 DDMLNLLDRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVL 726

Query: 351 -------------------MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
                              M  ++  PD+  C  +   L  +G L +A K    ++ +G
Sbjct: 727 MESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERG 785



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 19/360 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +S   + Y TL+D   K    + A R++ +M R+G++++      ++ +     KL  A 
Sbjct: 192 YSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNAL 251

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K G   +     T I    +  K  +AL+  + M+   I P   TYN++I G 
Sbjct: 252 RVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGY 311

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPD 359
               + E A++++  L   G  PD+ ++ T++   C E ++E+      KMV+ S   PD
Sbjct: 312 CDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPD 371

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+  L + G  + AL F +    KG  +D V Y+ ++ S C++ R+++A  L+ 
Sbjct: 372 QVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI 431

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M  +   PD  TY AI       GR++EA+K    M + G       +PNT        
Sbjct: 432 DMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHG------CKPNT-------- 477

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +SY+  +N  C  G+  +A ++   + +     N  TY  +M+G  +R   +S+A D
Sbjct: 478 ---VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGF-RREGKLSEACD 533



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 141/321 (43%), Gaps = 33/321 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C PD VTY  I+D   + G+++E + +L  M K G  PN  +Y  L++G C  G 
Sbjct: 433 MYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGK 492

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  ++++  ++   P+  TY ++++G+   G L EA  L +EM      P  V  N 
Sbjct: 493 SLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINL 552

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++ + +EA K ++E    G   N V    +I  +C+ G ++ A  ++ +M  + 
Sbjct: 553 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSN 612

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--------- 231
             PD VTY  L DA  K G ++EA  ++  M  KGL    +T  +++H  C         
Sbjct: 613 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDML 672

Query: 232 -----------------------CE-KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
                                  C+   L+EA  LL    +    LD  +   L+    +
Sbjct: 673 NLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLK 732

Query: 268 DEKANRALKLWDEMKERQIMP 288
              A  A K+  +M  R + P
Sbjct: 733 KGVALSAYKVACQMFRRNLTP 753



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 33/173 (19%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPN----------------------- 44
           PD VTY  + DAL KKG+L+E  +L+  M  +GL P                        
Sbjct: 615 PDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNL 674

Query: 45  ----------RTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
                     RT YN ++   C  G L+EA +++  + +  S  D  T ++L+      G
Sbjct: 675 LDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKG 734

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +   A+++  +M    L PD+     +  +    G  +EA KL+    E GI+
Sbjct: 735 VALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/432 (33%), Positives = 231/432 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T NT+++ L   GK  E   L+  M + G  PN  TY  +++  CK G 
Sbjct: 282 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 341

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              AM ++  M +     D   Y+++I+G C  G L+ AF L  EME   +  +++TYN 
Sbjct: 342 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 401

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F  +GR  +  KL+ ++ +  I PN VT +++I  + KEGK+ +A ++ + M   G
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 461

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD +TY +LID  CK  ++++A +M+D+M  KG   N  T N +++  C   ++D+  
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S RG   D V+Y TLI G+    K N A +L+ EM  R++ P+  TY  ++ GL
Sbjct: 522 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G++E+A+++  ++ +S M  D   +N IIHG C+  +V+ A      +  K  KP +
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ GLC++G L +A   FR     G A D  TYN LI +   +     +  L+ E
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701

Query: 421 MEEKKLGPDRYT 432
           ++      D  T
Sbjct: 702 LKRCGFSVDAST 713



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 244/482 (50%), Gaps = 17/482 (3%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           K G  PN  T++ L++G C  G + EA+ +VD M +    PD+ T N L+NG C +G   
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           EA  L  +M      P+ VTY  ++N   +SG++  A +L+ +++E  IK +AV ++I+I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              CK G +D A  +   ME  G + + +TYN LI   C AG  ++  +++  M ++ + 
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N +T + ++ +   E KL EA  L      RG   D ++Y +LI G+ ++   ++A ++
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            D M  +   P+  T+N +I G  ++ + +  +++  ++   G++ D  T+NT+I GFC 
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G++  A +   +MV +   P+IVT  ILL GLC  G  EKAL+ F         +D   
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN +I  +C   +++DA+ L   +  K + P   TY  +   L + G L EA+     M 
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           E G                   P   +Y+  I  H   G    ++++ EE ++ G +++ 
Sbjct: 669 EDGHA-----------------PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 711

Query: 518 ST 519
           ST
Sbjct: 712 ST 713



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 237/449 (52%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P+ +T++T+++ L  +G+++E  +L+  M + G  P+  T N LV+G C  G   E
Sbjct: 250 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 309

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           AM ++D M +    P+  TY  ++N  C +G    A  L ++ME   +  D V Y+ +I+
Sbjct: 310 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 369

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G    AF L +E++  GI  N +T+NI+I  +C  G+ D   K++R+M +   +P
Sbjct: 370 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VT++ LID+  K G + EA  +   M  +G+  +TIT  +++   C E  LD+A  ++
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    +G   +  ++  LI GY +  + +  L+L+ +M  R ++  T TYN +I G  + 
Sbjct: 490 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 549

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK   A ++  E++   + P+  T+  ++ G C  G+ EKAL+   K+ +   + DI   
Sbjct: 550 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 609

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ G+C    ++ A   F S  LKG      TYN +I  LCK+  L +A  L  +MEE
Sbjct: 610 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 669

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
               PD +TY  +  A +  G   ++ K 
Sbjct: 670 DGHAPDGWTYNILIRAHLGDGDATKSVKL 698



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 253/521 (48%), Gaps = 17/521 (3%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           N++Y   L +     K ++  DL  DM     +P    ++ L S   K       + +  
Sbjct: 151 NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 210

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M       +++T +++IN +C    L  AF    ++  L   P+ +T++TLIN     G
Sbjct: 211 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 270

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R  EA +L+D + E G KP+ +T N ++   C  GK  +A  ++  M E G  P+ VTY 
Sbjct: 271 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 330

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            +++  CK+G    A  ++  M  + +K++ +  + I+  LC    LD A+ L N    +
Sbjct: 331 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   + ++Y  LI G+    + +   KL  +M +R+I P+  T++ +I    + GK  +A
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 450

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            ++  E++  G+ PD  T+ ++I GFC E  ++KA Q  + MV K   P+I T NIL++G
Sbjct: 451 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 510

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            C+   ++  L+ FR   L+G   D+VTYNTLI   C+  +L  A  L  EM  +K+ P+
Sbjct: 511 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 570

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY  +   L ++G  E+A +               +     K+  E+D     Y+  I
Sbjct: 571 IVTYKILLDGLCDNGESEKALE---------------IFEKIEKSKMELDIGI--YNIII 613

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +  C+  +  DA  +F     KG+     TY  ++ GL K+
Sbjct: 614 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 654



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 228/470 (48%), Gaps = 17/470 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ +   M  ++ LP V  ++ L +        +    L K+ME   +  ++ T + +I
Sbjct: 169 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 228

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F    +   AF  + ++ + G +PN +T + +I   C EG++ +A ++V  M E G  
Sbjct: 229 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 288

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD +T NTL++  C +G   EA  ++D M   G + N +T   +L+ +C   +   A  L
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 348

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L    +R   LD V Y  +I G  +    + A  L++EM+ + I  +  TYN +I G   
Sbjct: 349 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 408

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G+ +    +L ++++  + P+  TF+ +I  F  EG++ +A + H +M+ +   PD +T
Sbjct: 409 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 468

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ G C+E  L+KA +     + KG   +  T+N LI+  CK  R++D   L  +M 
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + +  D  TY  +     E G+L  A++    MV             + K P    P+ 
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV-------------SRKVP----PNI 571

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++Y   ++  C  G  + AL+IFE+  +  + ++   Y  +++G+    K
Sbjct: 572 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 621


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 260/527 (49%), Gaps = 18/527 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V+Y   L +     K ++  DL  +M +    P    ++ L S   +       + +   
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M       +++T +++IN  C    L  AF    ++  L   PD VT++TLIN     GR
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA +L+D + E G KP  +T N ++   C  GK+  A  ++  M E GF P+ VTY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++   CK+G    A  ++  M  + +K++ +  + I+  LC +  LD A+ L N    +G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           +  D + Y TLI G+    + +   KL  +M +R+I P    ++A+I    + GK  +A 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++  E++Q G+ PD  T+ ++I GFC E Q++KA    + MV K   P+I T NIL++G 
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+  +++  L+ FR   L+G   D+VTYNTLI   C+  +LE A  L  EM  +++ PD 
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            +Y  +   L ++G  E+A +               +     K+  E+D     Y+  I+
Sbjct: 458 VSYKILLDGLCDNGEPEKALE---------------IFEKIEKSKMELDIGI--YNIIIH 500

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
             C+  +  DA  +F     KG+  +  TY  ++ GL K + S+S+A
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK-KGSLSEA 546



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 253/508 (49%), Gaps = 17/508 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T + +++   +  KL+     +  + K G  P+  T++ L++G C  G + EA+ +VD M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    P + T N L+NG C  G + +A  L   M      P+ VTY  ++    +SG++
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A +L+ +++E  IK +AV ++I+I   CK+G +D A  +   ME  GF  D + Y TL
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C AG  ++  +++  M ++ +  + +  + ++     E KL EA  L     +RG 
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V+Y +LI G+ ++ + ++A  + D M  +   P+  T+N +I G  ++   +  ++
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  ++   G++ D  T+NT+I GFC  G++E A +   +MV +  +PDIV+  ILL GLC
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G  EKAL+ F         +D   YN +I  +C   +++DA+ L   +  K + PD  
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   L + G L EA      M E G                   P+  +Y+  I  
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGH-----------------SPNGCTYNILIRA 571

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKST 519
           H  +G    + ++ EE ++ G +++ ST
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDAST 599



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 230/442 (52%), Gaps = 1/442 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +T N +++ L   GK+++   L+  M + G  PN  TY  ++   CK G    AM +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K   D   Y+++I+G C  G L+ AF L  EME      D++ Y TLI  F  
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +GR  +  KL+ ++ +  I P+ V  + +I  + KEGK+ +A ++ + M + G SPD VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +LID  CK   +++A  M+D+M  KG   N  T N +++  C    +D+   L    S
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   D V+Y TLI G+    K   A +L+ EM  R++ P   +Y  ++ GL  +G+ E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  ++ +S M  D   +N IIHG C+  +V+ A      +  K  KPD+ T NI++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC++G L +A   FR     G + +  TYN LI +   E     +  L+ E++     
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594

Query: 428 PDRYTYAAIHTALVESGRLEEA 449
            D  T   +   ++  GRL+++
Sbjct: 595 VDASTVKMV-VDMLSDGRLKKS 615



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 234/445 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT++T+++ L  +G+++E  +L+  M + G  P   T N LV+G C  G + +A+ +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +    P+  TY  ++   C +G    A  L ++ME  K+  D V Y+ +I+   +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    AF L +E++  G K + + +  +I+ +C  G+ D   K++R+M +   +PD V 
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++ LID   K G + EA  +   M ++G+  +T+T  +++   C E +LD+A  +L+   
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   +  ++  LI GY +    +  L+L+ +M  R ++  T TYN +I G  + GK E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++  E++   + PD  ++  ++ G C  G+ EKAL+   K+ +   + DI   NI++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G+C    ++ A   F S  LKG   D  TYN +I  LCK+  L +A  L  +MEE    
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559

Query: 428 PDRYTYAAIHTALVESGRLEEAQKF 452
           P+  TY  +  A +  G   ++ K 
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKL 584



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 211/411 (51%), Gaps = 1/411 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY  +L  + K G+     +LL  M+++ +  +   Y+I++ G CK G L  A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M       D+  Y  LI G+C AG  ++  +L ++M   K+ PDVV ++ LI+ 
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+  EA +L  E+ + GI P+ VT+  +I  +CKE ++DKA  ++  M   G  P+
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LI+  CKA  +++   +   M  +G+  +T+T NT++   C   KL+ A  L  
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R    D VSY  L+ G   + +  +AL++++++++ ++      YN +I G+  + 
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A D+   L   G+ PD  T+N +I G C +G + +A     KM E    P+  T N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           IL+     EG   K+ K        G +VD+ T   ++  L  + RL+ +F
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 17/273 (6%)

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
           +VSY   +     D K + A+ L+ EM   +  P    ++ +   ++++ + +  +D+  
Sbjct: 37  KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           ++   G+  +  T + +I+  C   ++  A     K+++  ++PD VT + L++GLC EG
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            + +AL+     +  G     +T N L++ LC   ++ DA  L+  M E    P+  TY 
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   + +SG+   A +    M E                  +I   ++ YS  I+  C 
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEE-----------------RKIKLDAVKYSIIIDGLCK 259

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            G   +A  +F E   KG   +   Y  L+ G 
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 249/457 (54%), Gaps = 8/457 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P++VT+N +++   K+G+  +   LL  M  +G+ PN  +YN L+ G CKL  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 61  LKEAMRVV-DLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             EA  +V D++++  +S PD+ TY+ L++G+C AG +EE+  L KE+ S  L PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
             ++    +S R  EA +L++E+   G  P  +T N +I   C+E  ++ A  +++ M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G   D VTYNTL+D  CKAG ++EA ++++ M   G   + +  ++ ++ LC   K+  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP-STFTYNAMI 297
           A+ +L       +  + V+Y T++ G  +  K + AL++ ++M        +   Y+ ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL + G+T++A  ++  + ++G  PD  T++++++G C  G++E+A++   +M  +  K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV-----TYNTLISSLCKERRLE 412
           P+ VT   L+ GLC  G L +A +        G   D       TYN LI  LCK  R++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           DA      M  +   PD  +Y+ I   L  SGR  +A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 235/467 (50%), Gaps = 15/467 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    P+  T+N L+NG+   G   +  RL + M +  + P+VV+YN L+    +  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 131 SMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
             EA +L+ ++   G +  P+ VT++ ++  YCK GK++++ ++++ +   G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             ++ + CK+  + EA  +++ M R G     IT NT++   C EK L+ A  LL + + 
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+Y TL+ G  +  +   A +L + MK     P    Y++ ++GL +SGK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILL 367
           A  +L ++  S   P+  T+NTI+ G C  G+++ AL+   +M        ++V  + ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G  ++A     +    G   D VTY++L++ LCK  ++E+A   + EM  +   
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  TY ++   L   GRL EA++    M             +     +   PS  +Y+ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMS------------SGGGGGDHCPPSVSTYNA 408

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            I   C  GR  DAL+ F+  R +G   +  +Y  ++ GL +  +++
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRAL 455


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 231/452 (51%), Gaps = 11/452 (2%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  L  L ++G+L+    L+  +   G  P     NIL+   C  G + +A RVV+ +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
           + +   + TYN ++NG+C AG ++ A   R+ ++S+   PD  TYN LI      G  ++
Sbjct: 125 SAT---IITYNTMVNGYCRAGNIDAA---RRMIDSVPFAPDTFTYNPLIRALCVRGCVLD 178

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  + D++   G  P+ VT++I++   CKE    +A  ++  M   G  PD VTYN LI+
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A C  G++ EA ++++ +   G K + +T   +L +LC  ++ +EA  LL          
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           DEV++  +IT   +     RA K+  +M E    P   TY++++ GL +  + ++AI +L
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 314 NELL----QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            ELL        IPD+ TFNTII   C +G  ++A++  ++M E    PDI T N ++ G
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 370 -LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LC+    E+AL      +  G   D+ TY +L   L +E  +E A G+   ++   L P
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           D+  Y AI   L +  R + A  F + MV  G
Sbjct: 479 DKMLYNAILLGLCKKWRTDLAIDFFAYMVSNG 510



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 226/426 (53%), Gaps = 8/426 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G     +TYNT+++   + G ++  R ++  +      P+  TYN L+   C  G 
Sbjct: 119 VEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGC 175

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ V D M      P V TY++L++  C     ++A  L  EM S    PD+VTYN 
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN     G   EA K+++ L  +G KP+AVT+  ++K  C   + ++A K++  M  N 
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VT+N +I + C+ G +  A +++  M   G   + IT ++I+  LC E+++DEA 
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAI 355

Query: 241 MLLNS----ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
            LL         +    D+V++ T+IT   +    +RA+K+ DEM E   +P   TYN +
Sbjct: 356 KLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCI 415

Query: 297 IWG-LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           + G L +S KTE+A+D+LN ++ +G+ PD TT+ ++  G   E ++E+A+    ++    
Sbjct: 416 VDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMG 475

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PD +  N +L GLC++   + A+ FF   +  G   D  TY  L+  +  E  LE+A 
Sbjct: 476 LSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAK 535

Query: 416 GLLSEM 421
            LL  +
Sbjct: 536 ELLGNL 541



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 200/425 (47%), Gaps = 29/425 (6%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N  +    + G    A +L+  +   G  P  +  NI+IK  C +G++  A ++V   E 
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVV---EA 121

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G S   +TYNT+++  C+AGN++ A RM+D +       +T T N ++  LC    + +
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLD 178

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  + +    RG     V+Y  L+    ++    +A+ L DEM+ +   P   TYN +I 
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            +   G   +A+ +LN L   G  PD  T+  ++   CS  + E+A +   KM      P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT N +++ LC++G + +A K        G   D +TY++++  LCKERR+++A  LL
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 419 ----SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
               +EM  K   PD+ T+  I T+L + G  + A K    M E G I            
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCI------------ 406

Query: 475 PEEIDPSSISYSEKINEH-CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                P   +Y+  ++   C   + ++AL +       G+  + +TY +L  GL  R   
Sbjct: 407 -----PDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL-SREDE 460

Query: 534 ISKAV 538
           + +A+
Sbjct: 461 MERAI 465



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 40/287 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +GC PD VTY  +L +L    +  E   LL+ M      P+  T+N +++  C+ G+
Sbjct: 256 LPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGF 315

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE----MESLKLLPDVV 116
           +  A +V+  M+++   PD+ TY+ +++G C    ++EA +L KE    M S   +PD V
Sbjct: 316 VGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQV 375

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY----CK---------- 162
           T+NT+I    + G    A K++DE+ EHG  P+  T+N ++  +    CK          
Sbjct: 376 TFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNL 435

Query: 163 ----------------------EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
                                 E ++++A  + R ++  G SPD + YN ++   CK   
Sbjct: 436 MVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWR 495

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            + A      M   G   +  T   ++  +  E  L+EA  LL + S
Sbjct: 496 TDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 238/457 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG   +  + N +++ L +   +     +L  M K G+ P+  T+N L++G C  G 
Sbjct: 118 MDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGE 177

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA+ + + M +    PDV +Y+ +ING C +G    A +L ++ME     P++V Y T
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L+ E+ + GI P+ VT++ ++  +C  G +++A  +   M    
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+  L+D  CK G + EA  + + M +KG + N  T N ++   C   ++DEA 
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+    +G      SY  LI GY +  + + A  L  EM E+++ P T TY+ ++ GL
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+ ++A+++  E+  SG++PD  T++T++ G C  G +++AL+    M E   +PDI
Sbjct: 418 CQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDI 477

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  NIL+ G+   G LE A + F      G      TY  +I  L KE   ++A+ L  +
Sbjct: 478 VLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           ME+    P+  +Y  I    +++     A +    MV
Sbjct: 538 MEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 228/433 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T+NT+++    +G++ E   L ++M ++G  P+  +Y+ +++G CK G 
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGN 212

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A++++  M +    P++  Y  +I+  C   ++ +A  L  EM    + PDVVTY+T
Sbjct: 213 TSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYST 272

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ F   G   EA  L +E+    + PN VT  I++   CKEG + +A  +   M + G
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG 332

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN L+D  C    M+EA +++D+M  KG      + N +++  C  ++LDEA 
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   S++    D V+Y TL+ G  +  +   AL L+ EM    ++P   TY+ ++ GL
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGL 452

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A+ +L  + +S + PD   +N +I G    G++E A +  +K+     +P I
Sbjct: 453 CKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTI 512

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  I++ GL +EG+ ++A + FR     G   +S +YN +I    + +    A  L+ E
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDE 572

Query: 421 MEEKKLGPDRYTY 433
           M  K+   D  T+
Sbjct: 573 MVGKRFSADSSTF 585



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 202/376 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ V Y TI+D+L K   +N+  DLLS+M  +G+ P+  TY+ ++ G+C LG 
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  + + M     +P+  T+ +L++G C  GM+ EA  + + M      P+  TYN 
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +  + +  EA K++D + + G  P   ++NI+I  YCK  ++D+A  ++  M E  
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY+TL+   C+ G  +EA  +   M   GL  + +T +T+L  LC    LDEA 
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEAL 462

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S  +     D V Y  LI G F   K   A +L+ ++    I P+  TY  MI GL
Sbjct: 463 KLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGL 522

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G +++A ++  ++   G +P+  ++N II GF        A++  ++MV K F  D 
Sbjct: 523 LKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADS 582

Query: 361 VTCNILLSGLCREGIL 376
            T  +LL    R+ I+
Sbjct: 583 STFQMLLDLESRDEII 598



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 206/398 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD ++Y+T+++ L K G  +    LL  M+++G  PN   Y  ++   CK   + +A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M      PDV TY+ +++G+C+ G L EA  L  EM    ++P+ VT+  L++ 
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA  + + + + G +PNA T+N ++  YC   ++D+A K++  M + G +P 
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +YN LI+  CK   ++EA  ++  M  K L  +T+T +T++  LC   +  EA  L  
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y TL+ G  +    + ALKL   M+E +I P    YN +I G+  +G
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A ++ ++L   G+ P   T+  +I G   EG  ++A +   KM +  F P+  + N
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYN 551

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +++ G  +      A++     + K  + DS T+  L+
Sbjct: 552 VIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 200/415 (48%), Gaps = 17/415 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P VV +   +    +  +      L +++D  G+  N  + NI+I   C+   +  A  +
Sbjct: 90  PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  M + G  PD +T+NTLI+  C  G ++EA  + + M R+G + + I+ +T+++ LC 
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
                 A  LL    ++G   + V+Y T+I    +D   N A+ L  EM +R I P   T
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y+ ++ G    G   +A  + NE++   ++P+  TF  ++ G C EG V +A      M 
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           +K  +P+  T N L+ G C    +++A K     + KG A    +YN LI+  CK RRL+
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  LL EM EK+L PD  TY+ +   L + GR +EA      M  +G +          
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL---------- 439

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  P  ++YS  ++  C  G   +AL++ +  ++  I  +   Y  L+ G+
Sbjct: 440 -------PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGM 487



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 200/384 (52%), Gaps = 17/384 (4%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           +P+ V     +    K+ +      +   M+  G + +  + N LI+  C+  ++  A  
Sbjct: 89  RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS 148

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           ++  M + G++ + IT NT+++  C E ++ EA  L N   +RG+  D +SY T+I G  
Sbjct: 149 VLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLC 208

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +    + AL+L  +M+E+   P+   Y  +I  L +      A+D+L+E++  G+ PD  
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T++TI+HGFCS G + +A    N+MV ++  P+ VT  IL+ GLC+EG++ +A   F + 
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             KG   ++ TYN L+   C   ++++A  +L  M +K   P  ++Y  +     +  RL
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRL 388

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +EA+   S++VE  +              +E+ P +++YS  +   C  GR ++AL +F+
Sbjct: 389 DEAK---SLLVEMSE--------------KELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 507 ETRQKGIAINKSTYMNLMNGLIKR 530
           E    G+  +  TY  L++GL K 
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKH 455



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 148/301 (49%), Gaps = 30/301 (9%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V +G  +    + ++ +  + L ++M    +  + ++ N +I  L +      AI +L +
Sbjct: 93  VEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGK 152

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + + G+ PD  TFNT+I+G C EG++++A+   N+MV +  +PD+++ + +++GLC+ G 
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGN 212

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
              AL+  R    KG   + V Y T+I SLCK+  + DA  LLSEM ++ + PD  TY+ 
Sbjct: 213 TSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYST 272

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------------------------ 471
           I       G L EA    + MV         V PNT                        
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRN------VMPNTVTFTILVDGLCKEGMVSEARCVFE 326

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           + T +  +P++ +Y+  ++ +C   +  +A ++ +    KG A    +Y  L+NG  KRR
Sbjct: 327 AMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRR 386

Query: 532 K 532
           +
Sbjct: 387 R 387


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/504 (30%), Positives = 243/504 (48%), Gaps = 18/504 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L KKG + E   LL  + K+G++PN  TYN+ + G C+ G L  A+R+V  +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    PDV TYN LI G C     +EA     +M +  L PD  TYNTLI  + + G  
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A +++ +   +G  P+  T+  +I   C EG+ ++A  +       G  P+ + YNTL
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I      G + EA ++ + M  KGL     T N +++ LC    + +A  L+     +GY
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + D  ++  LI GY    K   AL++ D M +  + P  +TYN+++ GL ++ K E  ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
               +++ G  P+  TFN ++   C   ++++AL    +M  KS  PD VT   L+ G C
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577

Query: 372 REGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           + G L+ A   FR      K   S  TYN +I +  ++  +  A  L  EM ++ LGPD 
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           YTY  +     ++G +    KF   M+E G I                 PS  +    IN
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI-----------------PSLTTLGRVIN 680

Query: 491 EHCSQGRYKDALQIFEETRQKGIA 514
             C + R  +A  I     QKG+ 
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLV 704



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 246/510 (48%), Gaps = 17/510 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C P   +YN I+  L   G  ++   +   M+ +G+ P+  ++ I +  +CK   
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R+++ M+      +V  Y  ++ G+       E + L  +M +  +   + T+N 
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    + G   E  KL+D++ + G+ PN  T+N+ I+  C+ G++D A ++V  + E G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TYN LI   CK    +EA   +  M  +GL+ ++ T NT++   C    +  A 
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++  A   G+  D+ +Y +LI G   + + NRAL L++E   + I P+   YN +I GL
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S  G   +A  + NE+ + G+IP+  TFN +++G C  G V  A      M+ K + PDI
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NIL+ G   +  +E AL+     +  G   D  TYN+L++ LCK  + ED       
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M EK   P+ +T+  +  +L    +L+EA      M                   + ++P
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM-----------------KNKSVNP 564

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQ 510
            ++++   I+  C  G    A  +F +  +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 242/508 (47%), Gaps = 17/508 (3%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           +KGK+ E  ++   M      P   +YN ++S     G+  +A +V   M      PDV+
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           ++ + +  +C       A RL   M S     +VV Y T++  F+E     E ++L  ++
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
              G+     T N +++  CK+G + +  K++  + + G  P+  TYN  I   C+ G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A RM+  +  +G K + IT N +++ LC   K  EA + L      G   D  +Y TL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY +      A ++  +      +P  FTY ++I GL   G+T +A+ + NE L  G+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+   +NT+I G  ++G + +A Q  N+M EK   P++ T NIL++GLC+ G +  A  
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             +  I KG   D  T+N LI     + ++E+A  +L  M +  + PD YTY ++   L 
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           ++ + E+  +    MVE G                   P+  +++  +   C   +  +A
Sbjct: 508 KTSKFEDVMETYKTMVEKG-----------------CAPNLFTFNILLESLCRYRKLDEA 550

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
           L + EE + K +  +  T+  L++G  K
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCK 578



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 214/432 (49%), Gaps = 7/432 (1%)

Query: 5   GCL------PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           GCL      PD +TYN ++  L K  K  E    L  M  +GL P+  TYN L++GYCK 
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G ++ A R+V     N  +PD +TY  LI+G C+ G    A  L  E     + P+V+ Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           NTLI      G  +EA +L +E+ E G+ P   T NI++   CK G +  A  +V+ M  
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G+ PD  T+N LI        ME A  ++DVM   G+  +  T N++L+ LC   K ++
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                 +  ++G   +  ++  L+    R  K + AL L +EMK + + P   T+  +I 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDET-TFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           G  ++G  + A  +  ++ ++  +   T T+N IIH F  +  V  A +   +MV++   
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD  T  +++ G C+ G +    KF    +  G      T   +I+ LC E R+ +A G+
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694

Query: 418 LSEMEEKKLGPD 429
           +  M +K L P+
Sbjct: 695 IHRMVQKGLVPE 706



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 222/464 (47%), Gaps = 3/464 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP+  TYN  +  L ++G+L+    ++  + +QG  P+  TYN L+ G CK    +EA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +  M      PD +TYN LI G+C  GM++ A R+  +      +PD  TY +LI+ 
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G +  A  L +E    GIKPN + +N +IK    +G I +A ++   M E G  P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N L++  CK G + +A  ++ VM  KG   +  T N ++H    + K++ A  +L+
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D  +Y +L+ G  +  K    ++ +  M E+   P+ FT+N ++  L +  
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK--PDIVT 362
           K ++A+ +L E+    + PD  TF T+I GFC  G ++ A     KM E+++K      T
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSSTPT 604

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            NI++     +  +  A K F+  + +    D  TY  ++   CK   +   +  L EM 
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           E    P   T   +   L    R+ EA      MV+ G +   V
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 257/524 (49%), Gaps = 22/524 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG---YCKLGWLKEAMRVV 68
           TY ++++ L   GK   + ++L DM++   V N     + V     Y + G ++EA+ V 
Sbjct: 42  TYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P V++YN +++   ++G  ++A ++   M    + PDV ++   +  F ++
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R   A +L++ +   G + N V +  ++  + +E    +  ++   M  +G S    T+
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+   CK G+++E  +++D + ++G+  N  T N  +  LC   +LD A  ++    +
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D ++Y  LI G  ++ K   A     +M    + P ++TYN +I G  + G  + 
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  ++ + + +G +PD+ T+ ++I G C EG+  +AL   N+ + K  KP+++  N L+ 
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL  +G++ +A +       KG   +  T+N L++ LCK   + DA GL+  M  K   P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D +T+  +        ++E A +   +M++ G                 +DP   +Y+  
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNG-----------------VDPDVYTYNSL 502

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +N  C   +++D ++ ++   +KG A N  T+  L+  L + RK
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 6/222 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN++L+ L K  K  +V +    M ++G  PN  T+NIL+   C+   L EA
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550

Query: 65  MRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLI 122
           + +++ M +NKS+ PD  T+  LI+G+C  G L+ A+ L ++ME + K+     TYN +I
Sbjct: 551 LGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F E      A KL  E+ +  + P+  T+ +M+  +CK G ++   K +  M ENGF 
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL---KMNTI 221
           P   T   +I+  C    + EA  ++  M +KGL    +NTI
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTI 711


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 257/512 (50%), Gaps = 19/512 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V+YNT+++ L K  KL E   LL +M+  G  PN  T   L+ G CK G + EAM +
Sbjct: 31  PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 90

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M +     DV  Y  LI+G+CN G L+    L  EM    +  +VVTY+ L++    
Sbjct: 91  LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 150

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  EA  +++ + EHGI P+ VT+  +I   CK+G+   A  ++  M E G  P  VT
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+   CK G + +AF+++ +M  KG K + +T NT++  LC + K+DEA  L NS  
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270

Query: 248 KRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                L+    ++  LI G  ++ +  +A+K+  +M ++    +  TYN ++ G  ++GK
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A+++  ++L  G +P+  T++ +I GFC    +  A     +M      P +   N 
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 390

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++ LC+EG LE+A   F+         D +++NT+I    K    +    L  +M E  
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L PD  T++ +   L + G L+EA+     MV +G                   P ++ Y
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASG-----------------FTPDALVY 493

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
              +    S+G   + + +  +   KG  +++
Sbjct: 494 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDR 525



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 256/516 (49%), Gaps = 19/516 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L  L + G + E   L+ +M ++ + P+  +YN L++G CK   LKEA+ ++  M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               P+  T   L++G C  G ++EA  L + M+      DVV Y TLI+ F  +G    
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
             +L DE+   GI  N VT++ ++   C+ G+  +A  ++  M E+G  PD VTY  LID
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK G    A  ++++M  KG + + +T N +L  LC E  + +A+ +L    ++G   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           D V+Y TL+ G     K + ALKL++ M   E  + P+ FT+N +I GL + G+  +A+ 
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  ++++ G   +  T+N ++ G    G++++A++   ++++  F P+  T +IL+ G C
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +  +L  A   F      G       YNTL++SLCKE  LE A  L  EM      PD  
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 421

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           ++  +    +++G  +  ++    MVE G                 + P ++++S  IN 
Sbjct: 422 SFNTMIDGTLKAGDFQFVKELQMKMVEMG-----------------LRPDALTFSTLINR 464

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
               G   +A    E     G   +   Y +L+ GL
Sbjct: 465 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 500



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 233/464 (50%), Gaps = 2/464 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P++VT  T++D L K G+++E  +LL  MKK+G   +   Y  L+SG+C  G 
Sbjct: 59  MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L     + D M       +V TY+ L++G C  G  +EA  +   M    + PDVVTY  
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR+  A  L++ + E G +P+ VT+N+++   CKEG +  A KI+R M E G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDE 238
              D VTYNTL+   C  G ++EA ++ + M      L+ N  T N ++  LC E +L +
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +     K+G   + V+Y  L+ G  +  K   A++LW ++ +   +P++FTY+ +I 
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  +      A  +  E+   G+ P    +NT++   C EG +E+A     +M   + +P
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI++ N ++ G  + G  +   +     +  G   D++T++TLI+ L K   L++A   L
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             M      PD   Y ++   L   G   E       M   G +
Sbjct: 479 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 209/380 (55%), Gaps = 19/380 (5%)

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           NI++K  C+ G + +A  ++R M     SPD V+YNTLI+  CKA  ++EA  ++  M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
            G   N++T  T++  LC + ++DEA  LL +  K+G+  D V YGTLI+G+  +   +R
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
             +L+DEM  + I  +  TY+ ++ GL + G+ ++A  +LN + + G+ PD  T+  +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C +G+   A+   N MVEK  +P  VT N+LLSGLC+EG++  A K  R  I KGK  
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           D VTYNTL+  LC + ++++A  L + M   E  L P+ +T+  +   L + GRL +A K
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               MV+ G   + V                 +Y+  +      G+ K+A++++++    
Sbjct: 302 IHRKMVKKGSCGNLV-----------------TYNMLLGGCLKAGKIKEAMELWKQVLDL 344

Query: 512 GIAINKSTYMNLMNGLIKRR 531
           G   N  TY  L++G  K R
Sbjct: 345 GFVPNSFTYSILIDGFCKMR 364



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 215/445 (48%), Gaps = 37/445 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   + VTY+ ++  L + G+  E   +L+ M + G+ P+  TY  L+ G CK G 
Sbjct: 129 MLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGR 188

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              AM +++LM +    P   TYN+L++G C  G++ +AF++ + M       DVVTYNT
Sbjct: 189 ATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 248

Query: 121 LINRFFESGRSMEAFKLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           L+    + G+  EA KL + +  +E+ ++PN  T N++I   CKEG++ KA KI R M +
Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 308

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G   + VTYN L+    KAG ++EA  +                         ++ LD 
Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMELW------------------------KQVLD- 343

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                      G+  +  +Y  LI G+ +    N A  L+ EM+   + P+ F YN ++ 
Sbjct: 344 ----------LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMA 393

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G  EQA  +  E+  +   PD  +FNT+I G    G  +   +   KMVE   +P
Sbjct: 394 SLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRP 453

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D +T + L++ L + G L++A       +  G   D++ Y++L+  L  +    +   LL
Sbjct: 454 DALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLL 513

Query: 419 SEMEEKKLGPDRYTYAAIHTALVES 443
            +M  K    DR   + I T L  S
Sbjct: 514 HQMAAKGTVLDRKIVSTILTCLCHS 538



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 191/404 (47%), Gaps = 37/404 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY  ++D L K G+     DLL+ M ++G  P+  TYN+L+SG CK G 
Sbjct: 164 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK--LLPDVVTY 118
           + +A +++ +M +     DV TYN L+ G C+ G ++EA +L   M   +  L P+V T+
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI    + GR  +A K+  ++ + G   N VT+N+++    K GKI +A ++ + + +
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            GF P+  TY+ LID  CK   +  A  +   M   GL       NT++ +LC E  L++
Sbjct: 344 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 403

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFR--------------------------DEKAN 272
           A  L           D +S+ T+I G  +                              N
Sbjct: 404 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 463

Query: 273 RALKL--WDEMK---ERQIM----PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           R  KL   DE K   ER +     P    Y++++ GLS  G T + I++L+++   G + 
Sbjct: 464 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 523

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           D    +TI+   C   Q    ++      + + +   ++CN LL
Sbjct: 524 DRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 567



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 22/331 (6%)

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
           +N +L  LC    + EA  L+    ++    D VSY TLI G  + +K   A+ L  EM+
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
                P++ T   ++ GL + G+ ++A+++L  + + G   D   + T+I GFC+ G ++
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +  +  ++M+ K    ++VT + L+ GLCR G  ++A     +    G   D VTY  LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             LCK+ R   A  LL+ M EK   P   TY  + + L + G + +A K   +M+E GK 
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK- 239

Query: 463 NHQVVQPNT--------SKTPEE-------------IDPSSISYSEKINEHCSQGRYKDA 501
              VV  NT         K  E              ++P+  +++  I   C +GR   A
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++I  +  +KG   N  TY  L+ G +K  K
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 273/527 (51%), Gaps = 26/527 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK---LGWLKEA 64
           P+  TY  ++ AL  +G++ +   +L +M+++G  P    Y++++   C     G  + A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 65  MRVV-DLMTQNKSLPDVWTYNMLINGWCN-AGMLEEAFRLRKEME-SLKLLPDVVTYNTL 121
           +RV+ DL  +  +L DV   N+++N  C+  G ++EA RL +++  S    PDVV+YN +
Sbjct: 173 VRVLQDLHGRGCAL-DVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +     + R      L++E+   G  PN VT N +I + C+ G  ++  +++  M ++G 
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGC 291

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD   Y T++D  CK G++E A  ++D M   GLK N +  NT+L  LC  ++ ++A  
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL         LD+V++  L+  + ++    R ++L ++M E   +P   TY  +I G  
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G  ++A+ +L  +   G  P+  ++  ++ G CS  +   A    ++M+E+   P+ V
Sbjct: 412 KEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV 471

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N +++ LC++G++E+A++  +  +L G + D ++Y+T+I  L K  + ++A  LL+ M
Sbjct: 472 TFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 531

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
             K + P+   Y++I +AL + GR+    Q F +I   T                  I  
Sbjct: 532 VNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT------------------IRS 573

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++ Y+  I+  C +G    A++        G   N+STY  L+ GL
Sbjct: 574 DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGL 620



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 228/421 (54%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC PD V+YN +L  L    +   V+DL+ +M + G  PN  T+N L+   C+ G  + 
Sbjct: 219 FGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFER 278

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             +V+  M  +   PD+  Y  +++G C  G LE A  +   M S  L P+VV YNT++ 
Sbjct: 279 VHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLK 338

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + R  +A +L+ E+ ++    + VT NI++ ++C+ G + +  +++  M E+G  P
Sbjct: 339 GLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVP 398

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY T+I+  CK G ++EA  ++  M   G + NTI+   +L  LC  ++  +A  L+
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   ++G   + V++ T+I    +     +A++L  +M      P   +Y+ +I GL ++
Sbjct: 459 SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKA 518

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GKT++A+++LN ++  GM P+   +++I      EG++ + +Q  + + + + + D V  
Sbjct: 519 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLY 578

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++S LC+ G  ++A++F    +  G   +  TY  LI  L  E  +++A  +L+E+  
Sbjct: 579 NAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCS 638

Query: 424 K 424
           K
Sbjct: 639 K 639



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 236/467 (50%), Gaps = 8/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKG-KLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKL 58
           + G GC  D    N +L+A+  +G  ++E   LL D+    G  P+  +YN ++ G C  
Sbjct: 179 LHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLC-- 236

Query: 59  GWLKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
              K   RV DLM +   +   P+V T+N LI   C  G+ E   ++  +M      PD+
Sbjct: 237 -MAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDI 295

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
             Y T+++   + G    A +++D +  +G+KPN V +N ++K  C   + ++A +++  
Sbjct: 296 RMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAE 355

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M +N    D VT+N L+D  C+ G +     +++ M   G   + IT  T+++  C E  
Sbjct: 356 MFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGL 415

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +DEA MLL S +  G   + +SY  ++ G    E+   A  L  +M E+   P+  T+N 
Sbjct: 416 IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNT 475

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + G  EQAI++L ++L +G  PD  +++T+I G    G+ ++AL+  N MV K 
Sbjct: 476 VINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 535

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P+ +  + + S L +EG + + ++ F +        D+V YN +ISSLCK    + A 
Sbjct: 536 MSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAI 595

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             L+ M      P+  TY  +   L   G ++EAQ+  + +   G +
Sbjct: 596 EFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 248/523 (47%), Gaps = 25/523 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN ++    + G+L   R L + +    + PN  TY  +V   C  G + +A+ V+D M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 73  QNKSLPDVWTYNMLINGWCN---AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           +    P    Y++++   C+    G    A R+ +++       DV   N ++N   + G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 130 RSM-EAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            S+ EA +L+ +L    G  P+ V++N ++K  C   +  +   ++  M   G  P+ VT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +NTLI   C+ G  E   +++  M   G   +     T+L  +C E  L+ A+ +L+   
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   + V Y T++ G    E+  +A +L  EM +        T+N ++    Q+G   
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           + I++L ++L+ G +PD  T+ T+I+GFC EG +++A+     M     +P+ ++  I+L
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC       A       I +G + + VT+NT+I+ LCK+  +E A  LL +M      
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  +Y+ +   L ++G+ +EA +  ++MV  G                 + P++I YS 
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKG-----------------MSPNTIIYSS 545

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             +    +GR    +Q+F+  +   I  +   Y  +++ L KR
Sbjct: 546 IASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKR 588


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 256/550 (46%), Gaps = 53/550 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  + V Y T++   +++   +E  +L   M   G+    +T+N L+   CK G 
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGD 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE  +++D + +   LP+++TYN  I G C  G L+ A R+   +      PDVVTYN 
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNY 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++ +  EA   + +L   G++P++ T+N +I  YCK G +  A +I+ N   NG
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNG 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD  TY +LID  C  G    A  + +    KG+K N I  NT++  L  +  + EA 
Sbjct: 352 FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAA 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  S++G   +  ++  L+ G  +    + A  L   M  +   P  FT+N +I G 
Sbjct: 412 QLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S   K E A+++L+ ++ +G+ PD  T+N++++G C   + E  ++ +  MVEK   P++
Sbjct: 472 STQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNL 531

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NILL  LCR   L+KAL        K    D+VT+ TLI   CK   L+ A+ L  +
Sbjct: 532 FTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591

Query: 421 MEE------------------------------------KKLGPDRYTYAAIHTALVESG 444
           MEE                                    + LGPD YTY  +     ++G
Sbjct: 592 MEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
            ++   KF   M+E G I                 PS  +    IN  C + R  +A  I
Sbjct: 652 NVDLGYKFLLEMMENGFI-----------------PSLTTLGRVINCLCVEDRVYEAAGI 694

Query: 505 FEETRQKGIA 514
                QKG+ 
Sbjct: 695 IHRMVQKGLV 704



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 249/510 (48%), Gaps = 17/510 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C P   +YN I+  L   G  ++   +   M+ +G+ P+  ++ I +  +C+   
Sbjct: 102 MDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R+++ M+      +V  Y  ++ G+      +E + L  +M +  +   + T+N 
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNK 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + G   E  KL+D++ + G+ PN  T+N  I+  C++G++D A ++V  + + G
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN LI   CK    +EA   +  +  +GL+ ++ T NT++   C    +  A 
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L +A   G+  DE +Y +LI G   + + NRAL L++E   + I P+   YN +I GL
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S  G   +A  + +E+ + G+IP+  TFN +++G C  G V  A      M+ K + PDI
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NIL+ G   +  +E AL+     +  G   D  TYN+L++ LCK  + ED       
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M EK   P+ +T+  +  +L    +L++A      M                   + ++P
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEM-----------------KNKSVNP 564

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQ 510
            ++++   I+  C  G    A  +F +  +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 212/423 (50%), Gaps = 1/423 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN ++  L K  K  E    L  +  +GL P+  TYN L++GYCK G ++ A R+
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +     N  +PD +TY  LI+G C+ G    A  L  E     + P+V+ YNTLI     
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G  +EA +L  E+ E G+ P   T NI++   CK G +  A  +V+ M   G+ PD  T
Sbjct: 404 QGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N LI        ME A  ++DVM   G+  +  T N++L+ LC   K ++      +  
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   +  ++  L+    R  K ++AL L +EMK + + P   T+  +I G  ++G  +
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 308 QAIDMLNELLQSGMIPDET-TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            A  +  ++ +  M+   T T+N IIH F  +  V  A +   +MV++   PD  T  ++
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+ G ++   KF    +  G      T   +I+ LC E R+ +A G++  M +K L
Sbjct: 644 VDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703

Query: 427 GPD 429
            P+
Sbjct: 704 VPE 706



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 239/508 (47%), Gaps = 17/508 (3%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           +KGK+ E  ++   M      P   +YN ++S     G+  +A +V   M      PDV+
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           ++ + +  +C       A RL   M S     +VV Y T++  F+E     E ++L  ++
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
              G+     T N ++   CK+G + +  K++  + + G  P+  TYN  I   C+ G +
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A RM+  +  +G K + +T N +++ LC   K  EA + L      G   D  +Y TL
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY +      A ++         +P  FTY ++I GL   G+T +A+ + NE L  G+
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+   +NT+I G  ++G + +A Q  ++M EK   P++ T NIL++GLC+ G +  A  
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             +  I KG   D  T+N LI     + ++E+A  +L  M +  + PD YTY ++   L 
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           ++ + E+  +    MVE G                   P+  +++  +   C   +   A
Sbjct: 508 KTSKYEDVMETYKTMVEKG-----------------CAPNLFTFNILLESLCRYHKLDKA 550

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
           L + EE + K +  +  T+  L++G  K
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCK 578



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 220/467 (47%), Gaps = 9/467 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP+  TYN  +  L +KG+L+    ++  +  QG  P+  TYN L+ G CK    +EA
Sbjct: 246 GVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA 305

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +  +      PD +TYN LI G+C  GM++ A R+         +PD  TY +LI+ 
Sbjct: 306 EVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDG 365

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G +  A  L +E    GIKPN + +N +IK    +G I +A ++   M E G  P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N L++  CK G + +A  ++ VM  KG   +  T N ++H    + K++ A  +L+
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D  +Y +L+ G  +  K    ++ +  M E+   P+ FT+N ++  L +  
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYH 545

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC- 363
           K ++A+ +L E+    + PD  TF T+I GFC  G ++ A     KM E      +V+C 
Sbjct: 546 KLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY----MVSCS 601

Query: 364 ----NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
               NI++     +  +  A K F+  + +    D  TY  ++   CK   ++  +  L 
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLL 661

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           EM E    P   T   +   L    R+ EA      MV+ G +   V
Sbjct: 662 EMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 255/524 (48%), Gaps = 22/524 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG---YCKLGWLKEAMRVV 68
           TY +I++ L   GK   + ++L DM++   V N     + V     Y + G ++EA+ V 
Sbjct: 42  TYRSIIEKLGLYGKFEAMEEVLVDMRQN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M      P V++YN +++   ++G  ++A ++   M    + PDV ++   +  F  +
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRT 159

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R   A +L++ +   G + N V +  ++  + +E   D+  ++   M  +G S    T+
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTF 219

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+   CK G+++E  +++D + ++G+  N  T N  +  LC + +LD A  ++     
Sbjct: 220 NKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLID 279

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D V+Y  LI G  ++ K   A     ++    + P +FTYN +I G  + G  + 
Sbjct: 280 QGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQL 339

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L   + +G +PDE T+ ++I G C EG+  +AL   N+ + K  KP+++  N L+ 
Sbjct: 340 AERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GL  +G++ +A +       KG   +  T+N L++ LCK   + DA GL+  M  K   P
Sbjct: 400 GLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D +T+  +        ++E A +   +M++ G                 +DP   +Y+  
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMMDNG-----------------VDPDVYTYNSL 502

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +N  C   +Y+D ++ ++   +KG A N  T+  L+  L +  K
Sbjct: 503 LNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHK 546



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 166/369 (44%), Gaps = 76/369 (20%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  P+ + YNT++  L  +G + E   L S+M ++GL+P   T+NILV+G CK+G + 
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVS 443

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A  +V +M      PD++T+N+LI+G+     +E A  +   M    + PDV TYN+L+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLL 503

Query: 123 NRFFESGR---SMEAFK--------------------------------LIDELDEHGIK 147
           N   ++ +    ME +K                                L++E+    + 
Sbjct: 504 NGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVN 563

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEE---------------NGFS---------- 182
           P+AVT   +I  +CK G +D A  + R MEE               + F+          
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEK 623

Query: 183 -----------PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                      PD  TY  ++D  CK GN++  ++ +  M   G   +  TL  +++ LC
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLC 683

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
            E ++ EA  +++   ++G   + V+    I  + + E A   L L D +K+  I  + +
Sbjct: 684 VEDRVYEAAGIIHRMVQKGLVPEAVN---TIFDHDKKEVAAPKLVLEDLLKKSCI--TYY 738

Query: 292 TYNAMIWGL 300
            Y  +  GL
Sbjct: 739 AYELLFDGL 747


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 267/528 (50%), Gaps = 20/528 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGK-LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G  PD V+YNT+++ L ++G+ L+    L   M  QGL P+  TYN ++S   K   + +
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDK 256

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  V+  M +N ++P+  T+N L++G+C++G   +A  + K M    + PDV TYNTL+ 
Sbjct: 257 AAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMG 316

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++GRSMEA K+ D + + G KPN+ T+  ++  Y  EG + K   ++  M  NG  P
Sbjct: 317 YLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQP 376

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D   +N LI    K G +++A  +   M R+GL  +T+T   ++  LC   K+D+A    
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQF 436

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   D V +  LI G    +K ++A +L  EM  R I P+   +N ++  L + 
Sbjct: 437 GRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKE 496

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +A ++ + +++  +  D  T+NT+I G+C  G+V++A +    MV    KP+ VT 
Sbjct: 497 GMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTY 556

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N +++G C+ G +E A   FR    KG     VTY+T++  L + RR   A  L   M +
Sbjct: 557 NTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIK 616

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
             +  D  TY  I   L ++   ++A + F ++ +    + ++                 
Sbjct: 617 SGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENR----------------- 659

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +++  I+     GR+ +A  +F     +G+  N  TY  +M  LI++
Sbjct: 660 -TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 706



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 224/450 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYNT++  L K G+  E R +   M K+G  PN  TY  L+ GY   G L + 
Sbjct: 303 GVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKM 362

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D+M +N   PD + +N+LI  +   G +++A  L  +M    L PD VTY  +++ 
Sbjct: 363 HHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDA 422

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A      L   G+ P+AV    +I   C   K DKA ++   M   G  P+
Sbjct: 423 LCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPN 482

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + +NTL++  CK G +  A  + D+M R  ++ + IT NT++   C   K+DEA  LL 
Sbjct: 483 NIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLE 542

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +EV+Y T+I GY ++ +   A  L+ +M  + + P   TY+ ++ GL Q+ 
Sbjct: 543 GMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR 602

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +T  A ++   +++SG+  D  T+N I+ G C     + AL+    +    F  +  T N
Sbjct: 603 RTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFN 662

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I++  L + G  ++A   F S + +G   + VTY  ++ SL ++  LE+   L   +E+ 
Sbjct: 663 IMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKN 722

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
               +     A+   L++ G + +A  + S
Sbjct: 723 GCTANSRMLNALVGKLLQKGEVRKAGVYLS 752



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/532 (22%), Positives = 229/532 (43%), Gaps = 97/532 (18%)

Query: 100 FRLRKEMESLKLLPDVVTYNTLIN----------------RFFESGRSMEAFKL------ 137
           FR    +   K+ P+++TY+ +I+                R   SG + EA         
Sbjct: 76  FRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKA 135

Query: 138 --------------IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-----EE 178
                         +  +   G  PN  ++ I++K  C E +  +A  ++  M       
Sbjct: 136 LCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTR 195

Query: 179 NGFSPDCVTYNTLIDANCKAG-NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
            G+ PD V+YNT+I+   + G  ++ A+ + D M  +GL  + +T N+I+  L   + +D
Sbjct: 196 GGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMD 255

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A ++L    K G   + +++ +L+ GY    K N A+ ++  M    + P  FTYN ++
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLM 315

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE------------------- 338
             L ++G++ +A  + + +++ G  P+  T+ T++HG+ +E                   
Sbjct: 316 GYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ 375

Query: 339 ----------------GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
                           G+V+ A+   +KM  +   PD VT  I++  LC  G ++ A+  
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   I +G   D+V +  LI  LC   + + A  L  EM  + + P+   +  +   L +
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNT--------SKTPEE-----------IDPSSI 483
            G +  A+    +MV    +   V+  NT         K  E            + P+ +
Sbjct: 496 EGMVARAKNIFDLMVRV-DVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEV 554

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +Y+  IN +C  GR +DA  +F +   KG+     TY  ++ GL + R++ +
Sbjct: 555 TYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAA 606



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 162/315 (51%), Gaps = 1/315 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+N+ +NT+L+ L K+G +   +++   M +  +  +  TYN L+ GYC  G 
Sbjct: 474 MIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGK 533

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++++ M  +   P+  TYN +ING+C  G +E+AF L ++M S  + P +VTY+T
Sbjct: 534 VDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYST 593

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++   F++ R+  A +L   + + GIK +  T+NI++   C+    D A +I +N+    
Sbjct: 594 ILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLID 653

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F  +  T+N +IDA  K G  +EA  +   +  +GL  N +T   ++ +L  +  L+E  
Sbjct: 654 FHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 713

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  K G   +      L+    +  +  +A     ++ E        T  +++  L
Sbjct: 714 DLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVL-L 772

Query: 301 SQSGKTEQAIDMLNE 315
             SGK +Q I+ + E
Sbjct: 773 VSSGKYDQHINAIPE 787


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 236/462 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  T + +++  F+  +++    +L+ + K GL     T+N L++G CK+G 
Sbjct: 148 MELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGK 207

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ + D M      PDV TY  +ING C  G    A  L ++M      PDVVTY+T
Sbjct: 208 FGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYST 267

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  R  EA  +   +   GI PN  T+N +I+  C   +  +A  ++  M    
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT++ LI+  CK GN+ EA  ++  M   G++ N +T +++++    + ++ EA 
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEAR 387

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   D  SY  LI GY + ++   A +L++EM  + + P   +YN +I GL
Sbjct: 388 KLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 447

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+  +A D+   +L +G +PD  T++ ++ GFC +G + KA +    M     KP++
Sbjct: 448 CQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 507

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  NIL+  +C+   L++A K F    ++G   +   Y T+I+ LCKE  L++A      
Sbjct: 508 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 567

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           MEE    P+ ++Y  I    ++      A +    M E G +
Sbjct: 568 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 252/513 (49%), Gaps = 18/513 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNE-VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           P  + +N +L A+ K    ++ V  L   M+  GL P+  T ++L++ + +L  +     
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  + +      + T+N LING C  G   +A  L  +M +    PDV TY T+IN   
Sbjct: 179 VLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC 238

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G ++ A  L  ++ E G +P+ VT++ +I   CK+ ++++A  I   M+  G SP+  
Sbjct: 239 KIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIF 298

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+LI   C      EA  M++ M    +  N +T + +++  C E  + EA  +L + 
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 358

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           ++ G   + V+Y +L+ GY    +   A KL+D M  +   P  F+YN +I G  ++ + 
Sbjct: 359 TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRI 418

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  + NE++  G+ PD  ++NT+I G C  G++ +A      M+     PD+ T +IL
Sbjct: 419 GEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSIL 478

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L G C++G L KA + FR+        + V YN LI ++CK R L++A  L SE+  + L
Sbjct: 479 LDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL 538

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+   Y  I   L + G L+EA +    M E G                   P+  SY+
Sbjct: 539 QPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG-----------------CPPNEFSYN 581

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             I           A+Q+  E R+KG   + +T
Sbjct: 582 VIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 191/358 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY+TI+D+L K  ++NE  D+ S MK +G+ PN  TYN L+ G C     +EA
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M     +P++ T+++LIN +C  G + EA  + K M  + + P+VVTY++L+N 
Sbjct: 317 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +      +EA KL D +   G KP+  ++NI+I  YCK  +I +A ++   M   G +PD
Sbjct: 377 YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 436

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YNTLID  C+ G + EA  +   M   G   +  T + +L   C +  L +A+ L  
Sbjct: 437 IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 496

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +        + V Y  LI    +      A KL+ E+  + + P+   Y  +I GL + G
Sbjct: 497 AMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEG 556

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             ++A++    + + G  P+E ++N II GF       +A+Q   +M EK F  D+ T
Sbjct: 557 LLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 229/470 (48%), Gaps = 18/470 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA-FRLRKEMESLKLLPDVVTYN 119
           + +A+   + M   K  P +  +N L++         +A   L K+ME   L PD  T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LIN FF+  R    F ++ ++ + G++   VT N +I   CK GK  +A ++  +M   
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G+ PD  TY T+I+  CK G    A  +   MG  G + + +T +TI+ +LC +++++EA
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +    +G   +  +Y +LI G     +   A  + +EM    IMP+  T++ +I  
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + G   +A  +L  + + G+ P+  T++++++G+  + +V +A +  + M+ K  KPD
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + + NIL++G C+   + +A + F   I +G   D V+YNTLI  LC+  RL +A  L  
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M      PD  TY+ +     + G L +A +    M  T                  + 
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST-----------------YLK 504

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           P+ + Y+  I+  C     K+A ++F E   +G+  N   Y  ++NGL K
Sbjct: 505 PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 202/397 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY TI++ L K G+      L   M + G  P+  TY+ ++   CK   
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRR 277

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +   M      P+++TYN LI G CN     EA  +  EM SL ++P++VT++ 
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F + G   EA  ++  + E G++PN VT++ ++  Y  + ++ +A K+   M   G
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  +YN LI+  CKA  + EA ++ + M  +GL  + ++ NT++  LC   +L EA+
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +    G   D  +Y  L+ G+ +     +A +L+  M+   + P+   YN +I  +
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S   ++A  + +EL   G+ P+   + TII+G C EG +++AL+    M E    P+ 
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            + N+++ G  +     +A++       KG   D  T
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 209/437 (47%), Gaps = 18/437 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA-FKLIDELDEHGIKPNAVTHN 154
           +++A      M   K  P ++ +N L++   +     +A   L  +++  G+ P+  T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           ++I  + +  ++D    ++  + + G     VT+NTLI+  CK G   +A  + D M  +
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G + +  T  TI++ LC   +   A  L     + G   D V+Y T+I    +D + N A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           L ++  MK + I P+ FTYN++I GL    +  +A  MLNE++   ++P+  TF+ +I+ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC EG V +A      M E   +P++VT + L++G   +  + +A K F   I KG   D
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             +YN LI+  CK +R+ +A  L +EM  + L PD  +Y  +   L + GRL EA     
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M+  G +                 P   +YS  ++  C QG    A ++F   +   + 
Sbjct: 462 NMLTNGNL-----------------PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 504

Query: 515 INKSTYMNLMNGLIKRR 531
            N   Y  L++ + K R
Sbjct: 505 PNMVMYNILIDAMCKSR 521



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 158/334 (47%), Gaps = 18/334 (5%)

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK-RGYYLDEVSY 258
           N+++A    + M  +  +   I  N +L  +   +   +A + L+   +  G   D  + 
Sbjct: 101 NIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTL 160

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             LI  +F+ ++ +    +  ++ +  +  +  T+N +I GL + GK  QA+++ ++++ 
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G  PD  T+ TII+G C  G+   A     KM E   +PD+VT + ++  LC++  + +
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 280

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           AL  F     KG + +  TYN+LI  LC   R  +A  +L+EM    + P+  T++ +  
Sbjct: 281 ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 340

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
              + G + EA+     M E G                 ++P+ ++YS  +N +  Q   
Sbjct: 341 IFCKEGNVFEARGVLKTMTEMG-----------------VEPNVVTYSSLMNGYSLQAEV 383

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +A ++F+    KG   +  +Y  L+NG  K ++
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 18/163 (11%)

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS-EMEEKKLGPDRYTYA 434
           ++ AL +F   + +      + +N L+S++ K R   DA   LS +ME   L PD YT  
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT-- 159

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +H  +    +L+      S++ +  K+  Q+              + ++++  IN  C 
Sbjct: 160 -LHMLINCFFQLQRVDLGFSVLAKIIKLGLQL--------------TIVTFNTLINGLCK 204

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            G++  A+++F++   +G   +  TY  ++NGL K  ++++ A
Sbjct: 205 VGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAA 247


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 240/472 (50%), Gaps = 19/472 (4%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLS---------------DMKKQGLVPNRTTY 48
            G  PD VT+NT+L  L  + +++E   L                  M + GL P   T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N L++G C  G + EA  +V+ M       DV TY  ++NG C  G  + A  L  +ME 
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + PDVV Y+ +I+R  + G   +A  L  E+ E GI PN  T+N MI  +C  G+   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +++R+M E   +PD +T+N LI A+ K G + EA ++ D M  + +  +T+T N++++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C   + D+A  + +  +      D V++ T+I  Y R ++ +  ++L  E+  R ++ 
Sbjct: 410 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +T TYN +I G  +      A D+  E++  G+ PD  T N +++GFC   ++E+AL+  
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             +       D V  NI++ G+C+   +++A   F S  + G   D  TYN +IS  C +
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             + DA  L  +M++    PD  TY  +    +++G ++++ +  S M   G
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 220/432 (50%), Gaps = 4/432 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  +T+NT+++ L  +G++ E   L++ M  +GL  +  TY  +V+G CK+G 
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K A+ ++  M +    PDV  Y+ +I+  C  G   +A  L  EM    + P+V TYN 
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F   GR  +A +L+ ++ E  I P+ +T N +I    KEGK+ +A K+   M    
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN++I   CK    ++A  M D+M       + +T NTI+   C  K++DE  
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 452

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   S+RG   +  +Y TLI G+   +  N A  L+ EM    + P T T N +++G 
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ K E+A+++   +  S +  D   +N IIHG C   +V++A      +     +PD+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++SG C +  +  A   F      G   D+ TYNTLI    K   ++ +  L+SE
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632

Query: 421 MEEKKLGPDRYT 432
           M       D +T
Sbjct: 633 MRSNGFSGDAFT 644



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 216/407 (53%), Gaps = 4/407 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D VTY TI++ + K G      +LLS M++  + P+   Y+ ++   CK G 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +   M +    P+V+TYN +I+G+C+ G   +A RL ++M   ++ PDV+T+N 
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+  EA KL DE+    I P+ VT+N MI  +CK  + D A    ++M +  
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLM 427

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VT+NT+ID  C+A  ++E  +++  + R+GL  NT T NT++H  C    L+ A 
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D ++   L+ G+  +EK   AL+L++ ++  +I   T  YN +I G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K ++A D+   L   G+ PD  T+N +I GFC +  +  A    +KM +   +PD 
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            T N L+ G  + G ++K+++        G + D+ T       +C+
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 242/551 (43%), Gaps = 65/551 (11%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  N ++    +  + +    L   M+ + +  N  ++NIL+  +C    L  ++     
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 71  MTQNKSLPDVWTYNMLINGWC----------------NAGMLEEAFRLRKEMESLKLLPD 114
           +T+    PDV T+N L++G C                  G L EA  L  +M  + L P 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPV 225

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V+T+NTLIN     GR +EA  L++++   G+  + VT+  ++   CK G    A  ++ 
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            MEE    PD V Y+ +ID  CK G+  +A  +   M  KG+  N  T N ++   C   
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +  +A  LL    +R    D +++  LI+   ++ K   A KL DEM  R I P T TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 295 AMIWGL-------------------------------SQSGKTEQAIDMLNELLQSGMIP 323
           +MI+G                                 ++ + ++ + +L E+ + G++ 
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           + TT+NT+IHGFC    +  A     +M+     PD +TCNILL G C    LE+AL+ F
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               +    +D+V YN +I  +CK  ++++A+ L   +    + PD  TY  + +     
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
             + +A      M + G                  +P + +Y+  I      G    +++
Sbjct: 586 SAISDANVLFHKMKDNGH-----------------EPDNSTYNTLIRGCLKAGEIDKSIE 628

Query: 504 IFEETRQKGIA 514
           +  E R  G +
Sbjct: 629 LISEMRSNGFS 639



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 209/470 (44%), Gaps = 37/470 (7%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      M   +     V  N +I  F    R   A  L  +++   I  N  + NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF---------- 205
           +IK +C   K+  +      + + GF PD VT+NTL+   C    + EA           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 206 -----RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
                 + D M   GL    IT NT+++ LC E ++ EA  L+N    +G ++D V+YGT
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           ++ G  +      AL L  +M+E  I P    Y+A+I  L + G    A  + +E+L+ G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+  T+N +I GFCS G+   A +    M+E+   PD++T N L+S   +EG L +A 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           K     + +    D+VTYN++I   CK  R +DA  +   M      PD  T+  I    
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID------------------PSS 482
             + R++E  +    +   G + +            E+D                  P +
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+ +  +   C   + ++AL++FE  +   I ++   Y  +++G+ K  K
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 32/314 (10%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           K LD+A    +   +   +   V    +I  + R  + + A+ L+ +M+ R+I  + +++
Sbjct: 85  KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I       K   ++    +L + G  PD  TFNT++HG C E ++ +AL     MVE
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 354 KSF---------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
             F                P ++T N L++GLC EG + +A       + KG  +D VTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            T+++ +CK    + A  LLS+MEE  + PD   Y+AI   L + G   +AQ   S M+E
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                 I P+  +Y+  I+  CS GR+ DA ++  +  ++ I  +  
Sbjct: 325 KG-----------------IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367

Query: 519 TYMNLMNGLIKRRK 532
           T+  L++  +K  K
Sbjct: 368 TFNALISASVKEGK 381



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 107/198 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + +  TYNT++    +   LN  +DL  +M   G+ P+  T NIL+ G+C+   L+EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + +++  +K   D   YN++I+G C    ++EA+ L   +    + PDV TYN +I+ 
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F       +A  L  ++ ++G +P+  T+N +I+   K G+IDK+ +++  M  NGFS D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641

Query: 185 CVTYNTLIDANCKAGNME 202
             T     +  C+  + E
Sbjct: 642 AFTIKMAEEIICRVSDEE 659


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 268/544 (49%), Gaps = 19/544 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G    PD  TY  ++ AL + G+++    +L+++++ G+ P   TYN+L+   C+ G +
Sbjct: 208 DGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRV 267

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +EA ++   M + +  P + T+ +LING        E   + +EME   + P+ V YN L
Sbjct: 268 EEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQL 327

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I      G   EA +L DE+   GIK   VT+N++ K  CKEG+++ A +I+  M   G 
Sbjct: 328 IGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGM 387

Query: 182 SPDCVTYNTLIDANCKA-GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  C  +N+++  + +  G ++   R++  M  + LK N   +   +  LC   K +EA 
Sbjct: 388 TVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAA 447

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +G  ++  +   LI G  +      A K+   M +  +     TYN MI   
Sbjct: 448 EIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFC 507

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ K E+AI + +++++ G  PD  TFNT +  +C+ G+VE  L   ++M  +  KPDI
Sbjct: 508 CKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDI 567

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   ++ G C+   + KA K+    I  G   ++V YN LI    +   + DA G+L  
Sbjct: 568 VTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDT 627

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIM---VETGKINHQVVQPNTSKTPE 476
           M+   + P   TY ++   +  +G +EEA++ F   +   +E G I + ++     K  +
Sbjct: 628 MKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGK 687

Query: 477 --------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                         +I P+ ++Y+  +  +C  G  ++A ++F+E    GI  +  +Y  
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNT 747

Query: 523 LMNG 526
           L++G
Sbjct: 748 LISG 751



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 229/491 (46%), Gaps = 26/491 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VT+  +++ L +  +  EV  +L +M+  G+ PN   YN L+  +C+ G   EA+R+
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRL 343

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M        V TYN++    C  G +E A ++  EM    LL  +  + +L N    
Sbjct: 344 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEM----LLAGMTVHCSLFNSVVA 399

Query: 128 -----SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                +GR     +LI E+    +KPN       I+  CK GK ++A +I   +   G  
Sbjct: 400 WHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLG 459

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            +  T N LI   C+  NM+EA +++  M   G++ + IT N ++   C   K++EA  L
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +   KRG+  D  ++ T +  Y    K    L L D+MK   + P   TY  +I G  +
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +    +A   L EL+++G+ P+   +N +I G+   G +  A+   + M     +P  +T
Sbjct: 580 AKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPIT 639

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+  +C  G++E+A + F   ILK   +  + Y  +I   CK  ++++A     EM 
Sbjct: 640 YNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMH 699

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + + P++ TY  +  A  + G  EEA K    MV +G                 I P +
Sbjct: 700 YRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSG-----------------IVPDT 742

Query: 483 ISYSEKINEHC 493
           +SY+  I+  C
Sbjct: 743 VSYNTLISGCC 753



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 227/450 (50%), Gaps = 3/450 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEGFG  P+ V YN ++    ++G  +E   L  +M  +G+     TYN++    CK G 
Sbjct: 312 MEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGE 371

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWC--NAGMLEEAFRLRKEMESLKLLPDVVTY 118
           ++ A +++D M           +N ++  W     G L+   RL +EM +  L P+    
Sbjct: 372 MEHAEQILDEMLLAGMTVHCSLFNSVV-AWHLRGTGRLDVVLRLIREMVARFLKPNDAVM 430

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
              I    + G+  EA ++   +   G+  N  T N +I   C+   + +A K+++ M +
Sbjct: 431 TACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVD 490

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G   D +TYN +I   CKA  MEEA ++ D M ++G K +  T NT L   C   K+++
Sbjct: 491 SGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVED 550

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              LL+     G   D V+YGT+I GY + +  ++A K   E+ +  + P+   YNA+I 
Sbjct: 551 ILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIG 610

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  ++G    AI +L+ +  +G+ P   T+N++++  C  G VE+A +   + + K+ + 
Sbjct: 611 GYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIEL 670

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            ++   I++ G C+ G +++A+ +F+    +    + +TY TL+ + CK    E+AF L 
Sbjct: 671 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLF 730

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            EM    + PD  +Y  + +   E   L++
Sbjct: 731 DEMVSSGIVPDTVSYNTLISGCCEVDSLDK 760



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 180/344 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++      +  L K+GK  E  ++   +  +GL  N  T N L+ G C+   +KEA +V
Sbjct: 425 PNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKV 484

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  +    D  TYN++I   C A  +EEA +LR +M      PD+ T+NT +  +  
Sbjct: 485 LKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCN 544

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +   L+D++   G+KP+ VT+  +I  YCK   + KA K +  + +NG  P+ V 
Sbjct: 545 LGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVI 604

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI    + G++ +A  ++D M   G++   IT N++++ +C    ++EA  +     
Sbjct: 605 YNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCI 664

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +   L  + Y  +I G+ +  K + A+  + EM  R I P+  TY  +++   + G  E
Sbjct: 665 LKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKE 724

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           +A  + +E++ SG++PD  ++NT+I G C    ++K ++   +M
Sbjct: 725 EAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 23/214 (10%)

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV--D 394
           + G +  A     ++  +   P I TCNIL+  L   G L+ A K F   +  G AV  D
Sbjct: 157 APGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVF-GEMRDGNAVAPD 215

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             TY  +I +LC+   ++ AF +L+E+E   + P   TY  +  AL  SGR+EEA +   
Sbjct: 216 VYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKG 275

Query: 455 IMVETGKINHQVVQPNT-------SKTPEEID------------PSSISYSEKINEHCSQ 495
            MVE G++   +V            +   E+D            P+ + Y++ I  HC +
Sbjct: 276 RMVE-GRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCRE 334

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           G   +AL++F+E   KGI     TY  +   L K
Sbjct: 335 GHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCK 368



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y  I+    K GK++E      +M  + + PN+ TY  L+  YCK G  +EA ++ D 
Sbjct: 673 IGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDE 732

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           M  +  +PD  +YN LI+G C    L++      EM S
Sbjct: 733 MVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 217/441 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            GC PDN T+NT++  L  +GK+ E   L      +G  P+  TY  L++G CK+G    
Sbjct: 214 LGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSA 273

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M Q    P+V  YN +I+  C    + EAF L  EM +  + PD+ TYN+LI+
Sbjct: 274 AIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIH 333

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                        L++E+    I PN V  + ++   CKEG I  A  +V  M + G  P
Sbjct: 334 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY  L+D +C    M+EA ++ D M  KG   N  + N +++  C  +++D+A  LL
Sbjct: 394 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S +G   D V+Y TLI G     +   A+ L+ EM     +P   TY  ++  L ++
Sbjct: 454 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 513

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
               +A+ +L  +  S +  D   +N  I G C  G++E A    + +  K  +PD+ T 
Sbjct: 514 HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTY 573

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ GLC+ G+L++A K FR     G + D   YNT+I    +      A  LL EM  
Sbjct: 574 NIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLA 633

Query: 424 KKLGPDRYTYAAIHTALVESG 444
           +    D  T   I   L + G
Sbjct: 634 EGFSADVSTTTLIVEMLSDDG 654



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 228/460 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T N ++++     +L     +L+ + K G  P+ TT+N L+ G C  G 
Sbjct: 176 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 235

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D        PDV TY  L+NG C  G    A RL + M      P+V+ YNT
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  E+   GI P+  T+N +I   C   +      ++  M  + 
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 355

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V ++T++DA CK G +  A  ++D+M ++G++ + +T   ++   C   ++DEA 
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 415

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++   +G   +  SY  LI GY + ++ ++A+ L ++M  + ++  T TYN +I GL
Sbjct: 416 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 475

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++ SG IPD  T+  ++   C    + +A+     +   +   DI
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 535

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  NI + G+CR G LE A   F +   KG   D  TYN +I  LCK   L++A  L  +
Sbjct: 536 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 595

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+E     D   Y  I    + S     A +    M+  G
Sbjct: 596 MDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEG 635



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 228/453 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +  +L ++ K    + V  L + M   G+ P+  T NIL++ +C L  L  A  V
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+N LI G C  G + EA  L  +       PDVVTY TL+N   +
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A +L+  + +   +PN + +N +I   CK+ ++ +A  +   M   G SPD  T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI A C     +    +++ M    +  N +  +T++  LC E  +  A+ +++   
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KRG   D V+Y  L+ G+    + + A+K++D M  +  +P+  +YN +I G  Q  + +
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L ++   G+I D  T+NT+IHG C  G+++ A+   ++MV     PD+VT  ILL
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L +A+   ++        D + YN  I  +C+   LE A  L S +  K L 
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 567

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           PD  TY  +   L + G L+EA K    M E G
Sbjct: 568 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG 600



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 223/470 (47%), Gaps = 17/470 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+   + M      P    +  L+              L  +M+S  + PDV T N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    R   AF ++ +L + G +P+  T N +I+  C EGKI +A  +       G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD VTY TL++  CK GN   A R++  M +K  + N I  NTI+ +LC ++++ EA+
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   D  +Y +LI       +      L +EM   +IMP+   ++ ++  L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G    A D+++ +++ G+ PD  T+  ++ G C   ++++A++  + MV K   P++
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + NIL++G C+   ++KA+       L+G   D+VTYNTLI  LC   RL+ A  L  E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  TY  +   L ++  L EA      MV    I               +D 
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEA------MVLLKAIE-----------GSNLDA 533

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             + Y+  I+  C  G  + A  +F     KG+  +  TY  +++GL KR
Sbjct: 534 DILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKR 583



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PD VTY  +LD L K   L E   LL  ++   L  +   YNI + G C+ G 
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +   ++     PDV TYN++I+G C  G+L+EA +L ++M+      D   YNT
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNT 610

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           +I  F  S  +  A +L+ E+   G   +  T  ++++    +G
Sbjct: 611 IIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN ++  L K+G L+E   L   M + G   +   YN ++ G+ +      A
Sbjct: 565 GLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGA 624

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
            +++  M       DV T  +++    + G+ +   RLR
Sbjct: 625 TQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERLR 663


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/566 (28%), Positives = 276/566 (48%), Gaps = 42/566 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F  +PD  +YN ++      G+  +   LL +M++ G  P   TYNILV+  C  G 
Sbjct: 236 MWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGN 295

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A R+ D M +     +  T+N+L++G+  AG ++EA+   +EM++  L+PD  T+N 
Sbjct: 296 MVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNI 355

Query: 121 LINRFFESGRSMEAFKLIDELDE-HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           L    ++ G++++      EL E  G + +A + ++++   C +G++D A K+V +  E 
Sbjct: 356 LSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQ 415

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G       +N L+ A  K G  E+A  +  VM + GL  ++ T N ++  LC + +LD+A
Sbjct: 416 GVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDA 475

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            +LL     +GY +   S+   +  YFR      ALK WD+M +  + P    ++A I G
Sbjct: 476 QLLLEHMICKGYCVG-TSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISG 534

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +     +A     E+   G +P+  T+N++I  FC  G V +AL+   KM +    PD
Sbjct: 535 LCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPD 594

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + T NIL+ G C+EG L+   K F      G   D VTYNT+I++ C  + +  A   ++
Sbjct: 595 VFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMN 654

Query: 420 EMEEKKLGPDRYTYAA-IHTA---------------LVESGRLEEAQKFTSIM------- 456
           +M      PD +TY   +H+                LV  G +  +  + ++M       
Sbjct: 655 KMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSDV 714

Query: 457 -----VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
                + TGK+     QPNT           ++ +   +  C QG  K AL   E+ ++ 
Sbjct: 715 LDRAMILTGKLIKMAFQPNT-----------VTVNVFFSHFCKQGFGKRALVWAEKLKED 763

Query: 512 GIAINKSTYMNLMNGLIKRRKSISKA 537
            +A + +T MN+++   K  +  S+A
Sbjct: 764 SVAFDDAT-MNILDWAYKEMEDDSQA 788



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 265/543 (48%), Gaps = 22/543 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P       +L  LF+ G++     +  +M  +G  P+   +N ++ G+C  G +   
Sbjct: 170 GNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIG 229

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++ +M +   +PD  +YN+LI G+   G   +AF+L  EM      P VVTYN L+N 
Sbjct: 230 LGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNV 289

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G  ++A +L DE+ + GI+ N +T N+++  Y K G++D+A    R M+  G  PD
Sbjct: 290 LCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPD 349

Query: 185 CVTYNTLIDANCKAGN-MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           C T+N L     K G  ++ A    ++    G +++  +++ ++  LC + +LD+A+ L+
Sbjct: 350 CCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLV 409

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            SA ++G  +    +  L+  Y ++    +AL+++  M +  ++PS+ T+N +I GL   
Sbjct: 410 CSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQ 469

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + A  +L  ++  G     T+F   +  +   G VE AL+  + MV+   +PD +  
Sbjct: 470 GRLDDAQLLLEHMICKGYCVG-TSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAF 528

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +  +SGLCR   + +A + F     +G   +++TYN+LIS+ C+   + +A  L  +M +
Sbjct: 529 SAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQ 588

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------------ 471
             L PD +T   +     + GRL+   K    M  +G +   VV  NT            
Sbjct: 589 SGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSG-LTPDVVTYNTIINAYCGAQDMS 647

Query: 472 -------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                      +  +P   +Y+  ++  C+      A+++ +E    G   N  TY  LM
Sbjct: 648 SAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLM 707

Query: 525 NGL 527
           +G+
Sbjct: 708 DGI 710


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 262/519 (50%), Gaps = 24/519 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD VTY++I++ L K G+L+E ++LL +MKK G+ PN   Y  L+    K G   EA
Sbjct: 268 GFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEA 327

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
                 +       D+     L++G   +   +EA  + + +  L L+P+ +TY  LI+ 
Sbjct: 328 FACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDG 387

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G       L+ E++E  I PN +T++ +I  Y K+G +D+A  +++ M +    P+
Sbjct: 388 YCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPN 447

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  LID  CKAG  E A  + + M   GLK+N +  + +++ L   K++DEA  LL 
Sbjct: 448 AYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLK 507

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + RG  LD V+Y +L+ G+F+  K + AL + +EM E+ I     TYN +I GL + G
Sbjct: 508 DVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHG 567

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A  + + +++ G+ P++ T+N +I  +C +G+++ AL+  N+M      P  +TCN
Sbjct: 568 KYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCN 626

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GL   G +EKA+       + G   + V +  L+++  K  +      +  ++ + 
Sbjct: 627 TLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDM 686

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSI---MVETGKINHQVVQPNTSKTPEEIDPS 481
            L  ++  Y   +  +V   RL   +K TS+   M+  G +                   
Sbjct: 687 GLKINQEAY---NNLIVVFCRLRMTKKATSVLKYMIRDGFV-----------------AD 726

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           +++Y+  I  +C     K AL  + +   +G++ N  TY
Sbjct: 727 TVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTY 765



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 271/540 (50%), Gaps = 19/540 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D V   T++D LFK  K  E  D+   + K  L+PN  TY  L+ GYCK+G ++  
Sbjct: 338 GMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERV 397

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +    P+V TY+ +ING+   G+L+EA  + K+M    ++P+   Y  LI+ 
Sbjct: 398 ESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDG 457

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++G+   A  L +E+   G+K N V  ++++    +  ++D+A ++++++   G   D
Sbjct: 458 YCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLD 517

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y +L+D   KAG    A  M++ M  K +  + +T N +++ L    K  EA  + +
Sbjct: 518 HVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYS 576

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   ++ +Y  +I  Y +  + + AL+LW+EMK  +IMPS+ T N ++ GLS++G
Sbjct: 577 GMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAG 636

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A+++LNE+   G+ P+      +++     G+    LQ H ++V+   K +    N
Sbjct: 637 EIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYN 696

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+   CR  + +KA    +  I  G   D+VTYN LI   C+   ++ A    ++M  +
Sbjct: 697 NLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNE 756

Query: 425 KLGPDRYTYAA----------------IHTALVESGRLEEAQKFTSIMVETGKINH--QV 466
            + P+  TY                  +   + E+G   +A  + +++   GKI +  + 
Sbjct: 757 GVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKES 816

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++       +   P + +Y+  I++    G+   A ++  E + +G+  + STY  L+ G
Sbjct: 817 IRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICG 876



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 273/558 (48%), Gaps = 40/558 (7%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D VTYNT++    + G +N+    LS M K+    +  T NILV G+C++G  K   R++
Sbjct: 76  DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIM 135

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D +    +  DV  +N LI+G+C AG +  A  L + M    LL D+V+YNTLIN F + 
Sbjct: 136 DNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKR 195

Query: 129 GRSMEAFKLIDELDE-HGIK--------------------PNAVTHNIMIKWYCKEGKID 167
           G   +A  L+ E+ E  G+K                     + +T+  +I  YCK+  ++
Sbjct: 196 GEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLE 255

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A  +   M  NGF PD VTY+++++  CK G + EA  ++  M + G+  N +   T++
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI 315

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            +L       EA+   +    RG  LD V   TL+ G F+  K   A  ++  + +  ++
Sbjct: 316 DSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLI 375

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P++ TY A+I G  + G  E+   +L E+ +  + P+  T+++II+G+  +G +++A+  
Sbjct: 376 PNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINV 435

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             KM++++  P+     IL+ G C+ G  E A   +    L G  V++V ++ L+++L +
Sbjct: 436 MKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKR 495

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            +R+++A  LL ++  + L  D   Y ++     ++G+   A      M E   I   VV
Sbjct: 496 GKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS-IPFDVV 554

Query: 468 QPN------------------TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
             N                  +      + P+  +Y+  I  +C QG   +AL+++ E +
Sbjct: 555 TYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMK 614

Query: 510 QKGIAINKSTYMNLMNGL 527
              I  +  T   L+ GL
Sbjct: 615 SHKIMPSSITCNTLVVGL 632



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 240/461 (52%), Gaps = 15/461 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   +NV ++ +++ L +  +++E  +LL D+  +GL+ +   Y  L+ G+ K G    A
Sbjct: 478 GLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537

Query: 65  MRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           + +V+ MT+ KS+P DV TYN+LING    G  E A  +   M  + L P+  TYN +I 
Sbjct: 538 LNMVEEMTE-KSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIK 595

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + G    A +L +E+  H I P+++T N ++    + G+I+KA  ++  M   G  P
Sbjct: 596 AYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHP 655

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V +  L++A+ K+G      +M + +   GLK+N    N ++   C  +   +A  +L
Sbjct: 656 NLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVL 715

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G+  D V+Y  LI GY       +AL  + +M    + P+  TYN ++ GL  +
Sbjct: 716 KYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGA 775

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +  ++ +++ ++G+ PD +T++T+I G+   G  +++++ + +MV + F P   T 
Sbjct: 776 GLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTY 835

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK-------ERRLE---- 412
           N+L+S   + G +++A +      ++G    S TY+ LI   C        +R L+    
Sbjct: 836 NVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYR 895

Query: 413 -DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            DA  L++EM +K   P + T A I +     G++ +A+K 
Sbjct: 896 TDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKL 936



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 253/542 (46%), Gaps = 45/542 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M     +P  + +N ++      G +++V D+ ++M    + PN  T+N+LV  +CK+G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+   DL+       D  TYN +I G+C  G++ +AF     M       D +T N 
Sbjct: 61  LILAL---DLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F   G +    +++D L   G   + +  N +I  YCK G++  A  +V  M + G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              D V+YNTLI+  CK G  ++A  ++ ++   +G+K                   D  
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVK-------------------DSV 218

Query: 240 YMLLNSASKRGYYL----DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +  ++   K+   L    D ++Y T+I+ Y +      A  L++EM     +P   TY++
Sbjct: 219 FFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSS 278

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++ GL + G+  +A ++L E+ + G+ P+   + T+I      G   +A    +++V + 
Sbjct: 279 IVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRG 338

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
              D+V C  L+ GL +    ++A   FR+        +S+TY  LI   CK   +E   
Sbjct: 339 MTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVE 398

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL EMEEK + P+  TY++I     + G L+EA      M++                 
Sbjct: 399 SLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLD----------------- 441

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           + I P++  Y+  I+ +C  G+ + A  ++ E +  G+ +N   +  L+N L KR K + 
Sbjct: 442 QNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNL-KRGKRMD 500

Query: 536 KA 537
           +A
Sbjct: 501 EA 502



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 23/320 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V +  +L+A  K GK N V  +   +   GL  N+  YN L+  +C+L  
Sbjct: 648 MSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRM 707

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+A  V+  M ++  + D  TYN LI G+C +  +++A     +M +  + P++VTYN 
Sbjct: 708 TKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNL 767

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     +G   E  +L D++ E+G+ P+A T++ +I  Y K G   ++ ++   M   G
Sbjct: 768 LLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQG 827

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P   TYN LI    K G M++A  +++ M  +G+  ++ T + ++   C   K  +  
Sbjct: 828 FVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPD-- 885

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+   K+ Y  D                   A  L  EM ++  +P   T   +    
Sbjct: 886 --LDRTLKKIYRTD-------------------AKNLITEMNDKGFVPCKSTIACISSTF 924

Query: 301 SQSGKTEQAIDMLNELLQSG 320
           ++ GK   A  +L E+    
Sbjct: 925 ARPGKMLDAEKLLKEIFSHA 944


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 235/432 (54%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+NT+L+ L  +G++ E  +L+  M     VP+  T N +V+G C    + EA+ +
Sbjct: 158 PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDL 217

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  N   P+ +TY  ++N  C +G    A  L ++ME  K+ P VVTY  +I+   +
Sbjct: 218 IARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCK 277

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A     E++  GIK N  T+N +I  +C  G+ D   +++R+M     +P+ VT
Sbjct: 278 DGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVT 337

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++ LID+  K G + EA  + + M  +G++ NTIT N++++ LC +K+LDEA  +++   
Sbjct: 338 FSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV 397

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D  +Y  LI G+ + ++ +  ++L+ +M  R ++  T TY+ +I G  QS K  
Sbjct: 398 SKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +  E++  G+ P   T+  ++ G C  G++E+AL   ++M +   + DI   NI++
Sbjct: 458 VAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIII 517

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G+C    ++ A   F S   KG   D  +YN ++S LCK   L +A  L  +M+E    
Sbjct: 518 HGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYE 577

Query: 428 PDRYTYAAIHTA 439
           PD  TY  +  A
Sbjct: 578 PDGCTYNTLIRA 589



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/443 (32%), Positives = 232/443 (52%), Gaps = 1/443 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD +T NTI++ L  K +++E  DL++ M   G  PN+ TY  +++  CK G    A+ 
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M   K  P V TY ++I+  C  G L++A     EME+  +  +V TYN+LI  F 
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +  +L+ ++    I PN VT + +I    KEGK+ +A  +   M   G  P+ +
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+LI   C    ++EA +MMD+M  KG   +  T N +++  C  K++D+   L    
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           S RG   D V+Y TLI G+ +  K   A K++ EM  + + P   TY  ++ GL  +G+ 
Sbjct: 432 SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A+ +L+++ +  M  D   +N IIHG C+  +V+ A      +  K  K DI + NI+
Sbjct: 492 EEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIM 551

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           LSGLC+   L +A   FR     G   D  TYNTLI +  +   +  +  L+ EM+    
Sbjct: 552 LSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGF 611

Query: 427 GPDRYTYAAIHTALVESGRLEEA 449
             D  T   I   ++ SG L+++
Sbjct: 612 SSDAST-VKIVMDMLSSGELDKS 633



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 255/527 (48%), Gaps = 17/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T N +++   ++ KL      +  + K G  PN  T+N L++G C  G 
Sbjct: 116 MELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGR 175

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ +VD M  ++ +PD+ T N ++NG C    + EA  L   M +    P+  TY  
Sbjct: 176 VFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGP 235

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++NR  +SG +  A  L+ +++   IKP+ VT+ I+I   CK+G++D A      ME  G
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +  TYN+LI + C  G  ++  +++  M  + +  N +T + ++ +L  E KL EA 
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    RG   + ++Y +LI G   D++ + A ++ D M  +   P  +TYN +I G 
Sbjct: 356 DLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGF 415

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + +  + +  ++   GMI D  T++T+I GFC   ++  A +   +MV +   P I
Sbjct: 416 CKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGI 475

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T  ILL GLC  G LE+AL            +D   YN +I  +C   +++DA+ L   
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCS 535

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +  K +  D  +Y  + + L +   L EA      M E G                  +P
Sbjct: 536 LPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG-----------------YEP 578

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              +Y+  I  H        ++Q+ EE ++ G + + ST   +M+ L
Sbjct: 579 DGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 238/459 (51%), Gaps = 18/459 (3%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++T N++IN +C    L  AF    ++  L   P+ VT+NTL+N     GR  EA +L+
Sbjct: 124 DLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELV 183

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           D +      P+ +T N ++   C + ++ +A  ++  M  NG  P+  TY  +++  CK+
Sbjct: 184 DCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           GN   A  ++  M  + +K + +T   I+  LC + +LD+A    +    +G   +  +Y
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            +LI  +    + +   +L  +M  R+I P+  T++A+I  L + GK  +A D+ NE++ 
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G+ P+  T+N++I+G C++ ++++A Q  + MV K   PDI T NIL++G C+   ++ 
Sbjct: 364 RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDD 423

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
            ++ FR   L+G   D+VTY+TLI   C+ R+L  A  +  EM  + + P   TYA +  
Sbjct: 424 GMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLD 483

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L ++G LEEA      M                K   E+D     Y+  I+  C+  + 
Sbjct: 484 GLCDNGELEEALGILDQM---------------HKCKMELDIGI--YNIIIHGMCNANKV 526

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            DA  +F     KG+  +  +Y  +++GL K R S+S+A
Sbjct: 527 DDAWSLFCSLPSKGVKRDIQSYNIMLSGLCK-RSSLSEA 564



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 209/431 (48%), Gaps = 17/431 (3%)

Query: 97  EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
           ++A  L + M   + LP V+ +N L      + +      L  +++  GI  +  T NIM
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           I  +C+  K+  A   +  + + G+ P+ VT+NTL++  C  G + EA  ++D M     
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             + ITLNTI++ LC + ++ EA  L+      G   ++ +YG ++    +      AL 
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L  +M+ R+I P   TY  +I  L + G+ + A+   +E+   G+  +  T+N++I  FC
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           S G+ +   Q    M+ +   P++VT + L+  L +EG L +A   +   I +G   +++
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN+LI  LC ++RL++A  ++  M  K   PD +TY  +     ++ ++++  +    M
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
              G I                   +++YS  I   C   +   A ++F+E   +G+   
Sbjct: 432 SLRGMI-----------------ADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474

Query: 517 KSTYMNLMNGL 527
             TY  L++GL
Sbjct: 475 IMTYAILLDGL 485



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 221/470 (47%), Gaps = 17/470 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ +   M +++ LP V  +N L          +    L K+ME   +  D+ T N +I
Sbjct: 73  DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F    +   AF  + ++ + G +PN VT N ++   C EG++ +A ++V  M  +   
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD +T NT+++  C    + EA  ++  M   G + N  T   IL+ +C       A  L
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L     R      V+Y  +I    +D + + AL  + EM+ + I  + FTYN++I     
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ +    +L +++   + P+  TF+ +I     EG++ +A   +N+M+ +  +P+ +T
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ GLC +  L++A +     + KG   D  TYN LI+  CK ++++D   L  +M 
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS 432

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + +  D  TY+ +     +S +L  A+K    MV  G                 + P  
Sbjct: 433 LRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG-----------------VHPGI 475

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++Y+  ++  C  G  ++AL I ++  +  + ++   Y  +++G+    K
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANK 525



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 185/394 (46%), Gaps = 30/394 (7%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K D A  + ++M  +   P  + +N L     +    +    +   M  KG+  +  TLN
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C  +KL  A+  +    K GY  + V++ TL+ G   + +   A++L D M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           Q +P   T N ++ GL    +  +A+D++  ++ +G  P++ T+  I++  C  G    A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L    KM  +  KP +VT  I++  LC++G L+ AL FF     KG   +  TYN+LI S
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            C   R +D   LL +M  +K+ P+  T++A+  +LV+ G+L EA+   + M+  G    
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG---- 365

Query: 465 QVVQPNT------------SKTPEE------------IDPSSISYSEKINEHCSQGRYKD 500
             ++PNT             K  +E             DP   +Y+  IN  C   +  D
Sbjct: 366 --IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDD 423

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            +++F +   +G+  +  TY  L+ G  + RK I
Sbjct: 424 GMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 17/268 (6%)

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           SY   +     D K + A+ L+  M   + +P+   +N +   L+++ + +  + +  ++
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G+  D  T N +I+ FC   ++  A     K+ +  ++P+ VT N LL+GLC EG +
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRV 176

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +A++     +L     D +T NT+++ LC + R+ +A  L++ M      P+++TY  I
Sbjct: 177 FEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPI 236

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              + +SG    A           K+ H+ ++P+            ++Y+  I+  C  G
Sbjct: 237 LNRMCKSGNTASALDLLR------KMEHRKIKPHV-----------VTYTIIIDNLCKDG 279

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLM 524
           R  DAL  F E   KGI  N  TY +L+
Sbjct: 280 RLDDALSFFSEMETKGIKANVFTYNSLI 307


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 242/456 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T N +++     G++     +L+ + K+G  P+  T+  L+ G C  G + +A
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 148

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   D +       D  +Y  LING C  G    A +L ++++     P+V  YNT+I+ 
Sbjct: 149 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDA 208

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     EA+ L  E+   GI  + VT+  +I  +C   K+ +A  ++  M     +P+
Sbjct: 209 LCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPN 268

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN L+DA CK G ++EA  ++ VM +  +K + IT +T++       +L +A  + N
Sbjct: 269 VYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S  G   D  SY  LI G+ +++  + AL L+ EM ++ ++P   TY+++I GL +SG
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +     D+++E+   G+  +  T+N++I G C  G +++A+   NKM ++  +P   T  
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFT 448

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ILL GLC+ G L+ A + F+  + KG  +D   YN +I+  CK+  LE+A  +LS+MEE 
Sbjct: 449 ILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN 508

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
              P+  T+  I  AL +    ++A+K    M+  G
Sbjct: 509 GCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 235/468 (50%), Gaps = 17/468 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+   + M   +  P +  +N +++ +        A  L   +E   + PD++T N LI
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F   G+    F ++ ++ + G +P+ +T   +IK  C +G+++KA      +   G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            D V+Y TLI+  CK G+   A +++  +  +  K N    NTI+  LC  + + EAY L
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 221

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +  + +G   D V+Y TLI G+    K   A+ L +EM  + I P+ +TYN ++  L +
Sbjct: 222 FSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK ++A ++L  +L++ + PD  T++T++ G+    +++KA    N M      PD+ +
Sbjct: 282 EGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHS 341

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             IL++G C+  ++++AL  F+    K      VTY++LI  LCK  R+   + L+ EM 
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++ +  +  TY ++   L ++G L+ A    + M + G                 I P S
Sbjct: 402 DRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG-----------------IRPCS 444

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +++  ++  C  GR KDA + F++   KG  ++   Y  ++NG  K+
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQ 492



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 167/322 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D VTY T++       KL E   LL++M  + + PN  TYNILV   CK G 
Sbjct: 225 MTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA  V+ +M +    PDV TY+ L++G+     L++A  +   M  + + PDV +Y  
Sbjct: 285 VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTI 344

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F ++    EA  L  E+ +  + P  VT++ +I   CK G+I     ++  M + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + +TYN+LID  CK G+++ A  + + M  +G++  + T   +L  LC   +L +A 
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQ 464

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                   +GY+LD   Y  +I G+ +      AL +  +M+E   +P+  T++ +I  L
Sbjct: 465 EAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
            +  + ++A  +L +++  G++
Sbjct: 525 FKKDENDKAEKLLRQMICRGLL 546



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 17/264 (6%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +  + A+  ++ M   +  P    +N ++   ++      A+ + + L   G+ PD  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I+ FC  GQ+        K++++ ++P  +T   L+ GLC +G + KAL F    + 
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   D V+Y TLI+ +CK      A  L+ +++ +   P+   Y  I  AL +   + E
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A    S M   G                 I    ++Y+  I   C   + K+A+ +  E 
Sbjct: 218 AYGLFSEMTAKG-----------------ISADVVTYTTLIYGFCIASKLKEAIGLLNEM 260

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             K I  N  TY  L++ L K  K
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGK 284


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 267/551 (48%), Gaps = 37/551 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD+ TY+ +L  L K G+L++ ++LL  +++ G+  N  TY++++ G CK   
Sbjct: 64  MQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASR 123

Query: 61  LKEAMRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           + +A+ +   M+     +PDV T+N L+ G C+   + EAF L + M      P+V++Y+
Sbjct: 124 VDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++   ++GR  EA +L +E+ E    P+ V +   +   CK  ++ +AC   R M   
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G   D V ++T+I   CK G+ EEA                   N ++  LC    LDEA
Sbjct: 244 GSKADAVAFSTVIGILCKKGHAEEA------------------QNQMIEHLCRSGMLDEA 285

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD---EMKERQIMPSTFTYNAM 296
                    R +      + TLI    + ++    + L+     MKE    P+  TYN M
Sbjct: 286 CKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIM 345

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +  L ++ + ++A +++NE+   G+ PD  T++ ++ G C  G++++A     +M ++  
Sbjct: 346 VDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV 405

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            PD  T   +L+ L + G ++ AL    +   +G   D VTYNTL+  LCK  R+++A  
Sbjct: 406 FPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAIT 465

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN-----HQVVQPNT 471
            L++M   K  PD ++Y  I TAL  SG+   A      MV+ G +      H ++    
Sbjct: 466 FLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525

Query: 472 SKTPEEI----------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
               E++           P  + +   ++  C  G+ +DA ++ E     G   +  TY+
Sbjct: 526 RNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYI 585

Query: 522 NLMNGLIKRRK 532
           N++ GL K  K
Sbjct: 586 NVVRGLRKLGK 596



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 218/452 (48%), Gaps = 23/452 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ ++Y+T+LD L K G+L+E   L  +M ++  VP+   Y   V+G CK   
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229

Query: 61  LKEAMRVVDLMTQNKSLPDVWTY-----------------NMLINGWCNAGMLEEAFRLR 103
           + EA      M    S  D   +                 N +I   C +GML+EA +  
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEA---FKLIDELDEHGIKPNAVTHNIMIKWY 160
           +EM S    P    +NTLI+   +S R  +    F+ +  + E    PN  T+NIM+   
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK  ++D+A ++V  M   G SPD VTY+ L+D  CK G ++ A  +++ M ++G+  ++
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T  +IL+ L    K+D A   L +   RG   D V+Y TL+ G  +  + + A+    +
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M   +  P  F+Y  +I  L +SG+   A  +  E+++ G++PD   +++++ G    G 
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL 529

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
            + AL+     +    KPD V   +++ GLC+ G  E A +        G   D+ TY  
Sbjct: 530 EDLALELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYIN 586

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           ++  L K  +++ A  L+ +  E     +R +
Sbjct: 587 VVRGLRKLGKVDKARQLVDDASETHTSVERLS 618



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 241/515 (46%), Gaps = 46/515 (8%)

Query: 58  LGWLKEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           LG +   +R+ D + + K     V+TYN  ++    A   + A+   ++M+     PD  
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY+ ++    ++G   +A +L+ +L E G+K N +T++++I   CK  ++D A +I + M
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 177 EENGFS-PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
              G   PD VT+N+L+   C    M EAF + + M + G + N I+ +T+L  LC   +
Sbjct: 135 SAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           LDEA  L     ++    D V+Y + +TG  +  +   A     +M  +        ++ 
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254

Query: 296 MIWGLSQSGKTEQAID-MLNELLQSGMI----------------PDETTFNTIIHGFCSE 338
           +I  L + G  E+A + M+  L +SGM+                P    FNT+IH  C  
Sbjct: 255 VIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS 314

Query: 339 GQVEKALQFHNKMVEKSFK-----PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            ++   +    +M  KS K     P++ T NI++  LC+   L++A +        G + 
Sbjct: 315 KRLPDGVLLFQRM--KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D VTY+ L+  LCK  +L+ A  LL EM ++ + PD +T A+I  AL ++G+++ A    
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 454 SIMVETGKINHQVVQPNT--------SKTPEEI-----------DPSSISYSEKINEHCS 494
             M   G     +V  NT         +  E I            P   SY+  I   C 
Sbjct: 433 ETMKARGS-TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            G+   A  IF+E  ++G+  +   Y +L++GL +
Sbjct: 492 SGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR 526



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 208/422 (49%), Gaps = 39/422 (9%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TYN  ++   ++     A++   ++   G  P+  T++I+++  CK G++DKA +++ 
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCE 233
            + E+G   + +TY+ +ID  CKA  +++A  +   M    G   + +T N++L  LC  
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSG 157

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           +++ EA++L    +K G   + +SY TL+ G  +  + + A +LW+EM E+  +P    Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            + + GL ++ +  +A D   +++  G   D   F+T+I   C +G  E+A    N+M+E
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA---QNQMIE 274

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                           LCR G+L++A K F   I +     +  +NTLI ++CK +RL D
Sbjct: 275 H---------------LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPD 319

Query: 414 A---FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
               F  +  M+E    P+  TY  +   L ++ +L+EAQ+  + M   G          
Sbjct: 320 GVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG---------- 369

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  + P  ++YS  ++  C  G+   A  + EE  ++G+  +  T  +++N L K 
Sbjct: 370 -------LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 531 RK 532
            K
Sbjct: 423 GK 424



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 128/263 (48%), Gaps = 19/263 (7%)

Query: 270 KANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           K +  ++L+D + +++    S FTYN  +  L+++   + A +   ++ + G  PD+ T+
Sbjct: 17  KISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTY 76

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           + ++ G C  G+++KA +   ++ E   K +++T ++++ G C+   ++ AL+ F++   
Sbjct: 77  SIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSA 136

Query: 389 KGKAV-DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            G  V D VT+N+L+  LC   R+ +AF L   M +    P+  +Y+ +   L ++GRL+
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA +    MVE   +                 P  ++Y+  +   C   R  +A     +
Sbjct: 197 EACRLWEEMVEKSCV-----------------PDLVAYTSFVTGLCKANRVAEACDCCRK 239

Query: 508 TRQKGIAINKSTYMNLMNGLIKR 530
              KG   +   +  ++  L K+
Sbjct: 240 MVTKGSKADAVAFSTVIGILCKK 262


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 268/588 (45%), Gaps = 71/588 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+   +  ++  L K G++ + R L   M + G+VP+  TYN ++ GY KLG + +A
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 65  MRVVDLMTQNKSLPDVWTYNMLI----------------------------------NGW 90
           +++ +LM +N   PD WTYN LI                                  NG+
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C A   ++A R++ +M S K   D+  +  LIN   +  R  EA +L++E+  +G+ PN 
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           +T+  +I  YCK GK+D A ++++ ME +G  P+  TYN+L+    K   + +A  ++  
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M + G+  N IT  T+L   C E   D A+ L     + G   DE +Y  L        K
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---K 579

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
           A RA + +  +  + +  +   Y  +I G S++G T+ A  ++  ++  G  PD  T++ 
Sbjct: 580 AGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 639

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++H  C + ++ +AL   ++M  +  K  I    IL+  + REG  + A + +      G
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 699

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
               + TY   I+S CKE RLEDA  L+ +ME + + PD  TY  +       G ++ A 
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 451 KFTSIMVETG----------------KINHQVVQP-NTSK-----------------TPE 476
                MV                   K N   V+  +TS                     
Sbjct: 760 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 819

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            ++P+  +YS  I   C  GR ++A  + +    KG++ N+  Y  L+
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 257/535 (48%), Gaps = 16/535 (2%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN  L +L +      +  + S + + GL+P+  TYN ++  YCK G L  A R   L+ 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +    P+ +T N L+ G+C  G L +A  L   M  +    +  +Y  LI    ++    
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L   +   G  PN      +I   CK G++  A  +   M +NG  P  +TYN +I
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
               K G M +A ++ ++M + G   +  T NT+++ LC ++K +EA  LLN+A K G+ 
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFT 389

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
              V++  LI GY   EK + AL++ ++M   +       +  +I  L +  + ++A ++
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE+  +G++P+  T+ +II G+C  G+V+ AL+    M     +P+  T N L+ GL +
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +  L KA+         G   + +TY TL+   C E   ++AF L   ME+  L PD + 
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 433 YAAIHTALVESGRLEEAQKF-TSIMVETGKINHQVVQPNTSKT--------------PEE 477
           YA +  AL ++GR EEA  F     V   K+ +  +    SK                E 
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             P S +YS  ++  C Q R  +AL I ++   +GI      Y  L++ +++  K
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 237/514 (46%), Gaps = 57/514 (11%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D   +  ++++L KK +L E ++LL+++   GLVPN  TY  ++ GYCK G +  A+
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+ +M ++   P+ WTYN L+ G      L +A  L  +M+   ++P+V+TY TL+   
Sbjct: 483 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK-IVRNMEENGFSPD 184
            +      AF+L + ++++G+KP+   + ++    CK G+ ++A   IVR     G +  
Sbjct: 543 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK----GVALT 598

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TLID   KAGN + A  +++ M  +G   ++ T + +LH LC +K+L+EA  +L+
Sbjct: 599 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S RG      +Y  LI    R+ K + A ++++EM      PS  TY   I    + G
Sbjct: 659 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEG 718

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL------------------- 345
           + E A D++ ++ + G+ PD  T+N +I G    G +++A                    
Sbjct: 719 RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC 778

Query: 346 --------------------------------QFHNKMVEKSFKPDIVTCNILLSGLCRE 373
                                           Q   +MV+    P + T + L++G C+ 
Sbjct: 779 LLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKA 838

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G LE+A         KG + +   Y  LI   C  +  E A   +S M E    P   +Y
Sbjct: 839 GRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESY 898

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +   L   G  E+ +     ++E G  NH  V
Sbjct: 899 RLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEV 931



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 223/495 (45%), Gaps = 58/495 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  TYN+++  L K  KL++   LL+ M+K G++PN  TY  L+ G C    
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA--FRLRKEMESLKLLPDVVTY 118
              A R+ ++M QN   PD   Y +L +  C AG  EEA  F +RK +   K     V Y
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTK-----VYY 602

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            TLI+ F ++G +  A  LI+ + + G  P++ T+++++   CK+ ++++A  I+  M  
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G       Y  LID   + G  + A RM + M   G K +  T    +++ C E +L++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL----------------------- 275
           A  L+    + G   D V+Y  LI G       +RA                        
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 276 ----------------------------KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                                       +L + M +  + P+  TY+++I G  ++G+ E
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L+ +   G+ P+E  +  +I   C     EKAL F + M E  F+P + +  +L+
Sbjct: 843 EACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC EG  EK    F   +  G   D V +  L   L K   ++  F +LS ME++   
Sbjct: 903 VGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCC 962

Query: 428 PDRYTYAAIHTALVE 442
               TYA +   + E
Sbjct: 963 ISSQTYALVTNKMHE 977


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 263/543 (48%), Gaps = 35/543 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T   +L+A  K  +  E   LL +  +    PN   Y  +++G+CK G + +A  ++D M
Sbjct: 78  TCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEM 137

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +     DV  ++ LI G C  G ++EA    K M   +  P+V+TYNT++N   ++ R 
Sbjct: 138 KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRI 196

Query: 132 MEAFKLIDELDE-----HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            EA +L D++++     HG +P+ ++++ +I   CK  ++DKA +  + M   G +P+ V
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY++LID  CK     E   ++  M  KG  +N I  N +LH L    + ++A       
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G   + V+Y   + G  +  + + A ++  EM E ++ P   TY+++I G  ++G+ 
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A D+   ++    IP   TF T++HGF    +  +A + H  MV   F P + T N+L
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +  +C    +E AL+ +     K +  D  TY  LI  LC+ RR+++A   L  ME   +
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNV 496

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP----------------- 469
            P+     A+   L + G ++EA      +VE G       QP                 
Sbjct: 497 VPNGAICHALVEVLCKQGEVDEACSVLDNVVEVG------CQPLGETFKILVEELYLRKK 550

Query: 470 -----NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                   ++P  +  ++ +YS  + E C  G+  +A+++ E+   KG+  ++ TY+ ++
Sbjct: 551 WEAASKLLRSPGFVADAA-TYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609

Query: 525 NGL 527
             L
Sbjct: 610 RSL 612



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 248/530 (46%), Gaps = 25/530 (4%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-----GLVPNRTTYNILVSGYCK 57
           G  C P+ +TYNT+++ L K  +++E  +L  DM+K+     G  P+  +Y+ ++   CK
Sbjct: 173 GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCK 232

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              + +A      M      P+V TY+ LI+G C      E   L   M+      +++ 
Sbjct: 233 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIID 292

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +N +++  +++    +A +  + L + G KPN VT+N+ +   CK G++D+A +I+  M 
Sbjct: 293 FNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMV 352

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E+  +PD +TY+++ID  CKAG M++A  +   M       + +T  T+LH     KK  
Sbjct: 353 ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSR 412

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA+ +       G+     +Y  L+      +    AL+++ +MK ++  P   TY  +I
Sbjct: 413 EAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLI 472

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
             L ++ + ++A + L+ +    ++P+    + ++   C +G+V++A    + +VE   +
Sbjct: 473 QCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQ 532

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P   T  IL+  L      E A K  RS    G   D+ TY+  ++ +CK  + ++A  +
Sbjct: 533 PLGETFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVEV 589

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           + +M  K + PD  TY A+  +L    R+E A      M   G                 
Sbjct: 590 IEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRG----------------- 632

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             P  ++Y+  I E CS     +A +IFE     G      T   L + L
Sbjct: 633 CAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCL 682



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 215/440 (48%), Gaps = 38/440 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL------------------- 41
           M   GC P+ VTY++++D L K  + +E  +LL  MK++G                    
Sbjct: 246 MRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 305

Query: 42  ----------------VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                            PN  TYN+ V G CK G + EA R++  M ++K  PDV TY+ 
Sbjct: 306 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           +I+G+C AG +++A  +   M   + +P  VT+ TL++ F E  +S EAF++ +++   G
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P   T+N+++   C    ++ A +I   M+     PDC TY  LI   C+A  ++EA 
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
             +DVM    +  N    + ++  LC + ++DEA  +L++  + G      ++  L+   
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
           +  +K   A KL   ++    +    TY+  +  + ++GK ++A++++ +++  G+ PDE
Sbjct: 546 YLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDE 602

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+  ++   C   +VE A+    KM  +   P +VT  +L+   C   + ++A + F +
Sbjct: 603 GTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEA 662

Query: 386 WILKGKAVDSVTYNTLISSL 405
            +  G    + T  TL S L
Sbjct: 663 MVAAGFTPQAQTMRTLSSCL 682



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 210/412 (50%), Gaps = 26/412 (6%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G + NA T  +++  + K  + ++A ++++   E    P+ + Y T+I+  CKAG +++A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           F ++D M  +G+KM+ +  +T++  LC + ++DEA     S  +     + ++Y T++ G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSP-NVITYNTVVNG 189

Query: 265 YFRDEKANRALKLWDEMKERQ-----IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
             +  + + AL+L+D+M++R        P   +Y+ +I  L ++ + ++A +    +   
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G  P+  T++++I G C   +  + L+    M EK F  +I+  N +L  L +    EKA
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            +FF   +  GK  + VTYN  +  LCK  R+++A+ +L EM E K+ PD  TY++I   
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 440 LVESGRLEEAQK-FTSIMVETGKINHQVV---------QPNTSKTPEEID---------P 480
             ++GR+++A   FT +MV    I H V          +   S+    +          P
Sbjct: 370 FCKAGRMDKADDVFTRMMVHEC-IPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIP 428

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              +Y+  ++  C     + AL+I+ + ++K    + +TY  L+  L + R+
Sbjct: 429 GLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 172/345 (49%), Gaps = 26/345 (7%)

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           + G + N  T   +L+     K+ +EA+ LL    +   + +E+ Y T+I G+ +  + +
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           +A +L DEMKER +      ++ +I GL + G+ ++A++    + +    P+  T+NT++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVV 187

Query: 333 HGFCSEGQVEKALQFHNKMVEKSF------KPDIVTCNILLSGLCREGILEKALKFFRSW 386
           +G C   ++++AL+  + M EK +      +PD+++ + ++  LC+   ++KA ++F+  
Sbjct: 188 NGLCKANRIDEALELFDDM-EKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM 246

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
              G A + VTY++LI  LCK  R  +   LL  M+EK  G +   + A+  AL ++   
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306

Query: 447 EEAQKFTSIMVETGK----INHQVVQPNTSKT--------------PEEIDPSSISYSEK 488
           E+A +F   ++++GK    + + V      K                 ++ P  I+YS  
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           I+  C  GR   A  +F          +  T+M L++G  + +KS
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 411



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 150/308 (48%), Gaps = 24/308 (7%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + +K G+  +  +   L+  + + ++   A +L  E  E    P+   Y  +I G  ++G
Sbjct: 66  AGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAG 125

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + +QA ++L+E+ + G+  D    +T+I G C +G++++AL+    M E+   P+++T N
Sbjct: 126 QVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC-SPNVITYN 184

Query: 365 ILLSGLCREGILEKALKFF-----RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +++GLC+   +++AL+ F     R     G   D ++Y+T+I +LCK +R++ A+    
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KIN--------HQVVQPN 470
            M      P+  TY+++   L +  R  E  +    M E G  IN        H + + +
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 471 TSKTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
             +   +           P+ ++Y+  ++  C  GR  +A +I  E  +  +  +  TY 
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYS 364

Query: 522 NLMNGLIK 529
           ++++G  K
Sbjct: 365 SIIDGFCK 372


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 268/588 (45%), Gaps = 71/588 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+   +  ++  L K G++ + R L   M + G+VP+  TYN ++ GY KLG + +A
Sbjct: 168 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 227

Query: 65  MRVVDLMTQNKSLPDVWTYNMLI----------------------------------NGW 90
           +++ +LM +N   PD WTYN LI                                  NG+
Sbjct: 228 LKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGY 287

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C A   ++A R++ +M S K   D+  +  LIN   +  R  EA +L++E+  +G+ PN 
Sbjct: 288 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 347

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           +T+  +I  YCK GK+D A ++++ ME +G  P+  TYN+L+    K   + +A  ++  
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M + G+  N IT  T+L   C E   D A+ L     + G   DE +Y  L        K
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---K 464

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
           A RA + +  +  + +  +   Y  +I G S++G T+ A  ++  ++  G  PD  T++ 
Sbjct: 465 AGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 524

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++H  C + ++ +AL   ++M  +  K  I    IL+  + REG  + A + +      G
Sbjct: 525 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 584

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
               + TY   I+S CKE RLEDA  L+ +ME + + PD  TY  +       G ++ A 
Sbjct: 585 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 644

Query: 451 KFTSIMVETG----------------KINHQVVQP-NTSK-----------------TPE 476
                MV                   K N   V+  +TS                     
Sbjct: 645 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 704

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            ++P+  +YS  I   C  GR ++A  + +    KG++ N+  Y  L+
Sbjct: 705 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 752



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 257/535 (48%), Gaps = 16/535 (2%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN  L +L +      +  + S + + GL+P+  TYN ++  YCK G L  A R   L+ 
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +    P+ +T N L+ G+C  G L +A  L   M  +    +  +Y  LI    ++    
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L   +   G  PN      +I   CK G++  A  +   M +NG  P  +TYN +I
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
               K G M +A ++ ++M + G   +  T NT+++ LC ++K +EA  LLN+A K G+ 
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFT 274

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
              V++  LI GY   EK + AL++ ++M   +       +  +I  L +  + ++A ++
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE+  +G++P+  T+ +II G+C  G+V+ AL+    M     +P+  T N L+ GL +
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +  L KA+         G   + +TY TL+   C E   ++AF L   ME+  L PD + 
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454

Query: 433 YAAIHTALVESGRLEEAQKF-TSIMVETGKINHQVVQPNTSKT--------------PEE 477
           YA +  AL ++GR EEA  F     V   K+ +  +    SK                E 
Sbjct: 455 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 514

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             P S +YS  ++  C Q R  +AL I ++   +GI      Y  L++ +++  K
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 569



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 237/514 (46%), Gaps = 57/514 (11%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D   +  ++++L KK +L E ++LL+++   GLVPN  TY  ++ GYCK G +  A+
Sbjct: 308 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 367

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+ +M ++   P+ WTYN L+ G      L +A  L  +M+   ++P+V+TY TL+   
Sbjct: 368 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 427

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK-IVRNMEENGFSPD 184
            +      AF+L + ++++G+KP+   + ++    CK G+ ++A   IVR     G +  
Sbjct: 428 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK----GVALT 483

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TLID   KAGN + A  +++ M  +G   ++ T + +LH LC +K+L+EA  +L+
Sbjct: 484 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 543

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S RG      +Y  LI    R+ K + A ++++EM      PS  TY   I    + G
Sbjct: 544 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEG 603

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL------------------- 345
           + E A D++ ++ + G+ PD  T+N +I G    G +++A                    
Sbjct: 604 RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC 663

Query: 346 --------------------------------QFHNKMVEKSFKPDIVTCNILLSGLCRE 373
                                           Q   +MV+    P + T + L++G C+ 
Sbjct: 664 LLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKA 723

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G LE+A         KG + +   Y  LI   C  +  E A   +S M E    P   +Y
Sbjct: 724 GRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESY 783

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +   L   G  E+ +     ++E G  NH  V
Sbjct: 784 RLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEV 816



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 223/495 (45%), Gaps = 58/495 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  TYN+++  L K  KL++   LL+ M+K G++PN  TY  L+ G C    
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA--FRLRKEMESLKLLPDVVTY 118
              A R+ ++M QN   PD   Y +L +  C AG  EEA  F +RK +   K     V Y
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTK-----VYY 487

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            TLI+ F ++G +  A  LI+ + + G  P++ T+++++   CK+ ++++A  I+  M  
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G       Y  LID   + G  + A RM + M   G K +  T    +++ C E +L++
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 607

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL----------------------- 275
           A  L+    + G   D V+Y  LI G       +RA                        
Sbjct: 608 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 667

Query: 276 ----------------------------KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                                       +L + M +  + P+  TY+++I G  ++G+ E
Sbjct: 668 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 727

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L+ +   G+ P+E  +  +I   C     EKAL F + M E  F+P + +  +L+
Sbjct: 728 EACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 787

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC EG  EK    F   +  G   D V +  L   L K   ++  F +LS ME++   
Sbjct: 788 VGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCC 847

Query: 428 PDRYTYAAIHTALVE 442
               TYA +   + E
Sbjct: 848 ISSQTYALVTNKMHE 862


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 265/524 (50%), Gaps = 18/524 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V   T++D LFK GK +E   +   + K   +PN  TY  ++ GYCKLG +  A  ++
Sbjct: 260 DLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLL 319

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M + + +P+V TY+ +ING+   GML+ A R+ K+M    ++P+   Y TLI+   ++
Sbjct: 320 RDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKA 379

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+   A  L +E+  +G++ N+   +  I    +  K+++A  + + M   G   D V Y
Sbjct: 380 GKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNY 439

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            +L+D   K G    AF M + M   G+K + +  N +++ L    K D A  + +   +
Sbjct: 440 TSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRE 498

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D  +Y T+I  Y +  K   A+KLW+EMK   +MP++ T N ++ GLS++G+TE+
Sbjct: 499 LGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETER 558

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           AID+LNE+L  G+ P+ T    +++      + +  LQ H ++V    K +    N L++
Sbjct: 559 AIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLIT 618

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LC  G+ ++A     +   +G + D+VTYN LI    K   +E A    ++M  + + P
Sbjct: 619 VLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSP 678

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
              TY  +   L+ +G + +A +  S M ++G                 +DP +  Y+  
Sbjct: 679 GIRTYNLLLGGLLAAGLMSKAYEILSKMKDSG-----------------LDPDASLYNTL 721

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+ H   G  K+A++ + E   KG+    STY  L+    K  K
Sbjct: 722 ISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGK 765



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 266/559 (47%), Gaps = 31/559 (5%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P    +N ++      G +++V DL S+M   G++PN  T+NILV  +CK+G L  A+ 
Sbjct: 8   VPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLAL- 66

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
             DL+       D  TYN  I G+C  G+  + F     M       D  T N L+  F 
Sbjct: 67  --DLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFC 124

Query: 127 ESGRSMEAFKLIDEL-----DEHG---IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
             G       ++D L     D+ G   ++PN VT+  +I  YCK+  + +A  +   M  
Sbjct: 125 RIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMIS 184

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +GF PD VTY+++I+  CK G + EA  ++  M + G+  N +    ++ +L       E
Sbjct: 185 DGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWE 244

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           +++  +     G   D V   TLI G F+  K++ A  ++  + +   +P+  TY AMI 
Sbjct: 245 SFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMID 304

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  + G  + A  +L ++ +  ++P+  T+++II+G+  +G ++ A++   KM++++  P
Sbjct: 305 GYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMP 364

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +      L+ G  + G  + A+  +    L G   +S   +  I++L + R++E+A GL 
Sbjct: 365 NAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLC 424

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------- 471
             M  K L  DR  Y ++     ++GR   A      M ETG I   VV  N        
Sbjct: 425 KYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETG-IKFDVVAYNVLINGLLR 483

Query: 472 -SKTPEE----------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             K   E          + P   +Y+  IN +C QG+ ++A++++ E +   +  N  T 
Sbjct: 484 LGKYDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSIT- 542

Query: 521 MNLMNGLIKRRKSISKAVD 539
            N++ G + +     +A+D
Sbjct: 543 CNILVGGLSKAGETERAID 561



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 261/545 (47%), Gaps = 43/545 (7%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+P+N+TY  ++D   K G ++    LL DM+K+ +VPN  TY+ +++GY K G L  A+
Sbjct: 292 CIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAV 351

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGM------------------------------ 95
           R++  M     +P+ + Y  LI+G   AG                               
Sbjct: 352 RIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNL 411

Query: 96  -----LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
                +EEA  L K M S  LL D V Y +L++ FF++GR   AF + +++ E GIK + 
Sbjct: 412 KRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDV 471

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           V +N++I    + GK D A  +   + E G +PD  TYNT+I+A CK G +E A ++ + 
Sbjct: 472 VAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNE 530

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M    +  N+IT N ++  L    + + A  +LN     G   +   +  L+    + E+
Sbjct: 531 MKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCER 590

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
           A+  L++   +    +  +   YN++I  L   G T++A  +LN + + G+  D  T+N 
Sbjct: 591 ADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNA 650

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +IHG      +EKAL  + +M+ +   P I T N+LL GL   G++ KA +        G
Sbjct: 651 LIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSG 710

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D+  YNTLIS   K    ++A     EM  K L P   TY  +     + G++++A+
Sbjct: 711 LDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQAR 770

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEI-DPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           +  +      ++  + V PN+S     I    ++S   +++    +    +A  +F E  
Sbjct: 771 ELLN------EMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMN 824

Query: 510 QKGIA 514
           +KG  
Sbjct: 825 EKGFV 829



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 221/451 (49%), Gaps = 17/451 (3%)

Query: 16  ILDAL---FKKG-KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           I+DA     K+G K+ E   L   M  +GL+ +R  Y  L+ G+ K G    A  + + M
Sbjct: 403 IVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKM 462

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +     DV  YN+LING    G  + A  +   +  L L PD  TYNT+IN + + G+ 
Sbjct: 463 AETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKL 521

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A KL +E+  H + PN++T NI++    K G+ ++A  ++  M   G  P+   +  L
Sbjct: 522 ENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRAL 581

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ++A  K    +   +M   +   GLK N    N+++  LC       A ++LN+ +K G 
Sbjct: 582 LNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGI 641

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V+Y  LI G+F+     +AL  + +M    + P   TYN ++ GL  +G   +A +
Sbjct: 642 SADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYE 701

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+++  SG+ PD + +NT+I G    G  ++A++F+ +MV K   P   T N+L+    
Sbjct: 702 ILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFA 761

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLC---KERRLE---------DAFGLLS 419
           + G +++A +      ++    +S TY+ LI   C   K+  L+         +A  L +
Sbjct: 762 KVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFA 821

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
           EM EK   P   T A I +     G + +A+
Sbjct: 822 EMNEKGFVPCENTLACISSTFARPGMVVDAK 852



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 199/430 (46%), Gaps = 28/430 (6%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           ++P +  +N LI +F  +G   + + L  E+   G+ PN  THNI++  +CK G +  A 
Sbjct: 7   IVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLAL 66

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            ++RN++      D VTYNT I   C+ G   + F  + +M +K    ++ T N ++   
Sbjct: 67  DLIRNVD---IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGF 123

Query: 231 C--CEKKLDEAYM------LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
           C     K  E  M      + +         + V+Y TLI+ Y +    + AL L++EM 
Sbjct: 124 CRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMI 183

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
               +P   TY+++I GL + G   +A  +L E+ + G+ P+   +  ++      G   
Sbjct: 184 SDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAW 243

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           ++  + ++M+      D+V C  L+ GL + G  ++A   F +        +++TY  +I
Sbjct: 244 ESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMI 303

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              CK   ++ A  LL +ME+K++ P+  TY++I     + G L+ A +    M++    
Sbjct: 304 DGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLD---- 359

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                        + I P++  Y+  I+ H   G+   A+ ++ E +  G+  N      
Sbjct: 360 -------------QNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDA 406

Query: 523 LMNGLIKRRK 532
            +N L + RK
Sbjct: 407 FINNLKRGRK 416



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 134/343 (39%), Gaps = 93/343 (27%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH------- 333
           ++   I+P+   +N +I+  + +G   Q  D+ +E+L  G++P+  T N ++H       
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 334 -------------------------GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
                                    GFC +G   +   F + MV+K    D  TCNIL+ 
Sbjct: 62  LSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVK 121

Query: 369 GLCREGI-------------------------------------------LEKALKFFRS 385
           G CR G                                            L +AL  +  
Sbjct: 122 GFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEE 181

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            I  G   D VTY+++I+ LCK   L +A  LL EM++  + P+   YA +  +L ++G 
Sbjct: 182 MISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGS 241

Query: 446 LEEAQKFTSIMVETGKINHQVV---------QPNTSKTPEEI---------DPSSISYSE 487
             E+  + S M+  G     VV         +   S   E +          P++I+Y+ 
Sbjct: 242 AWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTA 301

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I+ +C  G    A  +  +  +K +  N  TY +++NG  K+
Sbjct: 302 MIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKK 344


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/610 (27%), Positives = 295/610 (48%), Gaps = 93/610 (15%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  T+N ++ +L +   L+  R+L   M ++G  PN+ T  ILV G+C+ G  K+A
Sbjct: 146 GVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQA 205

Query: 65  MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  VD  M  N    +   YN L++ +C   M +EA +L + M    LLPDVVT+N+ I+
Sbjct: 206 LEFVDGKMGGN---VNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRIS 262

Query: 124 RFFESGRSMEAFKLIDELDEHG----IKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-- 177
               +G+  EA ++  ++   G     KPN VT N+M+K +C+EG +++A  +V  M+  
Sbjct: 263 ALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKG 322

Query: 178 ---------------------------------ENGFSPDCVTYNTLIDANCKAGNMEEA 204
                                            ENG  P+  +YN ++D  C+   M +A
Sbjct: 323 GNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDA 382

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            R+MD+M   G+  +T+T  T+LH  C + K+ EA  +LN   ++G + +  +  TL+  
Sbjct: 383 RRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNS 442

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM--- 321
            +++ + + A ++  +M E+     T T N ++ GL ++G+ E+A ++++E+   G    
Sbjct: 443 LWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSL 502

Query: 322 -------------------IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
                              +PD  T+ T+I+G C  G++E+A +   +M+ K+  PD VT
Sbjct: 503 GKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVT 562

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            +  +   C++G +  AL+  +     G +    TYN+LI  L  + ++ + +GL+ EM 
Sbjct: 563 YDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMR 622

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS---------- 472
           E+ + PD  TY  +   L E G+ ++A      M++ G     VV PN S          
Sbjct: 623 ERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKG-----VVSPNVSSFKILIKAFC 677

Query: 473 -----KTPEEIDPSSIS--------YSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                K   E+   ++S        YS   NE  + G+  DA ++FE + ++ +      
Sbjct: 678 KSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM 737

Query: 520 YMNLMNGLIK 529
           Y +L++ L K
Sbjct: 738 YEDLIDKLCK 747



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 238/468 (50%), Gaps = 24/468 (5%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YNT L  L + GKL E R +L +M + G+ PN  +YNI++ G C+   + +A R++DLM
Sbjct: 330 SYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLM 389

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             N   PD  TY  L++G+C+ G + EA  +  EM      P+  T NTL+N  ++ GR 
Sbjct: 390 VSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRK 449

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--------- 182
            EA +++ +++E   + + VT NI++   C+ G+++KA ++V  M  +G +         
Sbjct: 450 SEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVA 509

Query: 183 -------------PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
                        PD +TY TLI+  CK G +EEA +    M  K L  +++T +T +  
Sbjct: 510 GLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLN 569

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C + K+  A  +L    + G      +Y +LI G     +      L DEM+ER I P 
Sbjct: 570 FCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPD 629

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFH 348
             TYN MI  L + GKT+ A  +L+E+L  G++ P+ ++F  +I  FC  G  + A +  
Sbjct: 630 ICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELF 689

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           +  +      + +  +++ + L   G L  A + F + + +     +  Y  LI  LCK+
Sbjct: 690 DVALSVCGHKEALY-SLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKD 748

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            RL+DA GLL ++ +K    D  ++  +   L + G  ++A +   IM
Sbjct: 749 GRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIM 796



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 241/484 (49%), Gaps = 47/484 (9%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M Q    P+ +T+N+LI   C +  L+ A  L  +M      P+  T   L+  F  +GR
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           + +A + +D   + G   N V +N ++  +CK+   D+A K+V  M E G  PD VT+N+
Sbjct: 202 TKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNS 259

Query: 191 LIDANCKAGNMEEA---FRMMDVMGRKGL-KMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            I A C+AG + EA   FR M + G  GL K N +T N +L   C E  ++EA  L+ + 
Sbjct: 260 RISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETM 319

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G ++   SY T + G  R+ K      + DEM E  I P+ ++YN ++ GL ++   
Sbjct: 320 KKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMM 379

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A  +++ ++ +G+ PD  T+ T++HG+CS+G+V +A    N+M+ K   P+  TCN L
Sbjct: 380 LDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTL 439

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM---EE 423
           L+ L +EG   +A +  +    K   +D+VT N +++ LC+   LE A  ++SEM     
Sbjct: 440 LNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGT 499

Query: 424 KKLG-------------------PDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKIN 463
             LG                   PD  TY  +   L + G+LEEA +KF  +M +     
Sbjct: 500 NSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKN---- 555

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         + P S++Y   +   C QG+   AL++ ++  + G +    TY +L
Sbjct: 556 --------------LHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSL 601

Query: 524 MNGL 527
           + GL
Sbjct: 602 ILGL 605



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 162/556 (29%), Positives = 262/556 (47%), Gaps = 51/556 (9%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
            ++ + + V  L +DM + G+ P   T+N+L+   C+   L  A  + D M++    P+ 
Sbjct: 127 LQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNK 186

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV--VTYNTLINRFFESGRSMEAFKLI 138
           +T  +L+ G+C AG  ++A     E    K+  +V  V YNTL++ F +   + EA KL+
Sbjct: 187 FTVGILVRGFCRAGRTKQAL----EFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLV 242

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG----FSPDCVTYNTLIDA 194
           + + E G+ P+ VT N  I   C+ GK+ +A +I R+M+ +G      P+ VT+N ++  
Sbjct: 243 ERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKG 302

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C+ G MEEA  +++ M + G  ++  + NT L  L    KL E   +L+   + G   +
Sbjct: 303 FCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPN 362

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             SY  ++ G  R+     A +L D M    + P T TY  ++ G    GK  +A  +LN
Sbjct: 363 IYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILN 422

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           E+++ G  P+  T NT+++    EG+  +A +   KM EKS++ D VTCNI+++GLCR G
Sbjct: 423 EMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNG 482

Query: 375 ILEKALKFFRSWILKG----------------------KAVDSVTYNTLISSLCKERRLE 412
            LEKA +        G                         D +TY TLI+ LCK  +LE
Sbjct: 483 ELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLE 542

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----------------QKFTSIM 456
           +A     EM  K L PD  TY        + G++  A                Q + S++
Sbjct: 543 EAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLI 602

Query: 457 VETGKINHQVVQPNTSKTPEE--IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG-I 513
           +  G                E  I P   +Y+  IN  C  G+ KDA  +  E   KG +
Sbjct: 603 LGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVV 662

Query: 514 AINKSTYMNLMNGLIK 529
           + N S++  L+    K
Sbjct: 663 SPNVSSFKILIKAFCK 678



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 117/231 (50%), Gaps = 15/231 (6%)

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           Q  +      +  +++Q+G+ P+  TFN +I   C    ++ A +  +KM EK  +P+  
Sbjct: 128 QQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKF 187

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T  IL+ G CR G  ++AL+F    +  G  V+ V YNTL+SS CK+   ++A  L+  M
Sbjct: 188 TVGILVRGFCRAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERM 245

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            EK L PD  T+ +  +AL  +G++ EA +    M   G++            P+   P+
Sbjct: 246 TEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELG----------LPK---PN 292

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            ++++  +   C +G  ++A  + E  ++ G  ++  +Y   + GL++  K
Sbjct: 293 VVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGK 343



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 56/313 (17%)

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L+ +M +  + P T+T+N +I  L +S   + A ++ +++ + G  P++ T   ++ GFC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 337 SEGQVEKALQFHN---------------------------------KMVEKSFKPDIVTC 363
             G+ ++AL+F +                                 +M EK   PD+VT 
Sbjct: 198 RAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTF 257

Query: 364 NILLSGLCREGILEKALKFFRSWILKGK----AVDSVTYNTLISSLCKERRLEDAFGLLS 419
           N  +S LCR G + +A + FR   + G+      + VT+N ++   C+E  +E+A  L+ 
Sbjct: 258 NSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVE 317

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTP 475
            M++        +Y      L+ +G+L E +     MVE G      ++ +V     +  
Sbjct: 318 TMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNH 377

Query: 476 EEID--------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
             +D              P +++Y+  ++ +CS+G+  +A  I  E  +KG   N  T  
Sbjct: 378 MMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCN 437

Query: 522 NLMNGLIKR-RKS 533
            L+N L K  RKS
Sbjct: 438 TLLNSLWKEGRKS 450



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 112/214 (52%), Gaps = 6/214 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC     TYN+++  L  KG++ E+  L+ +M+++G+ P+  TYN +++  C+ G 
Sbjct: 586 MERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGK 645

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            K+A  ++ +++ +    P+V ++ +LI  +C +G  + A  L     S+    + + Y+
Sbjct: 646 TKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEAL-YS 704

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            + N     G+  +A +L +   E  +      +  +I   CK+G++D A  +++ + + 
Sbjct: 705 LMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDK 764

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           G+  D  ++  +ID   K GN ++A    D +GR
Sbjct: 765 GYCFDHSSFIPVIDGLSKRGNKQQA----DELGR 794


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 244/465 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G + D  T+N +++   + G  +    +   + K+G  PN  T+N L+ G C  G 
Sbjct: 96  MELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGH 155

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   D +       D  +Y  LING C  G +  A +L K ++   + P+ V YN 
Sbjct: 156 IHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 215

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++    +AF L  ++    I P+  T N +I  +C  G++ +A  ++  M    
Sbjct: 216 IIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILEN 275

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P   T++ L+DA CK G ++EA  M+ V  +K + ++ +T N+++   C  K++++A 
Sbjct: 276 INPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAK 335

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +S + RG   +  SY T+I G  + +  + A+ L++EM+ R+I+P+  TYN++I GL
Sbjct: 336 DIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGL 395

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK    + +++E+   G  P+  T+N+I+   C    V+KA+     + ++  +PD+
Sbjct: 396 GKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDM 455

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  +L+ GLC+ G LE A K F   ++KG  +D  TY  +I   C +   + A  LLS+
Sbjct: 456 YTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSK 515

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           ME+    P+  TY  +  +L E    + A+K    M+  G ++ +
Sbjct: 516 MEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEK 560



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 227/487 (46%), Gaps = 54/487 (11%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+      P +  +N +++    A     A  L ++ME   ++ D  T+N LIN F + G
Sbjct: 60  LLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLG 119

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
            +  +F +  ++ + G  PNA+T N +IK  C +G I +A      +   GF  D V+Y 
Sbjct: 120 LNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYG 179

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI+  CK G +  A +++  +  K ++ N +  N I+  +C  K +++A+ L +    +
Sbjct: 180 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 239

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               D+ +  +LI G+    +   A+ L  +M    I P  +T++ ++    + GK ++A
Sbjct: 240 RISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEA 299

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             ML   ++  +I D  T+N+++ G+C   ++ KA    + M  +    ++ +   +++G
Sbjct: 300 KMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMING 359

Query: 370 LCREGILEKALKFFR---------------------------SWILK--------GKAVD 394
           LC+  ++++A+  F                            S +LK        G+  +
Sbjct: 360 LCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPN 419

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FT 453
            +TYN+++ +LCK   ++ A  LL+ ++++ + PD YTY  +   L +SG+LE+AQK F 
Sbjct: 420 IITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFE 479

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            ++V+   ++                    +Y+  I   C +G +  AL +  +    G 
Sbjct: 480 DLLVKGYNLD------------------VYTYTVMIQGFCVKGLFDAALALLSKMEDNGC 521

Query: 514 AINKSTY 520
             N  TY
Sbjct: 522 IPNAKTY 528



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 203/420 (48%), Gaps = 17/420 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P ++ +N +++   ++     A  L  +++ +GI  +  T NI+I  + + G    +  +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              + + GF P+ +T+NTLI   C  G++ +A    D +  +G  ++ ++  T+++ LC 
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++  A  LL     +    + V Y  +I    + +  N A  L+ +M  ++I P  FT
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
            N++I+G    G+ ++A+ +L++++   + P   TF+ ++  FC EG+V++A       +
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           +K    D+VT N L+ G C    + KA   F S   +G   +  +Y T+I+ LCK + ++
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  L  EM  +K+ P+  TY ++   L + G++    K    M + G       QP   
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG-------QP--- 417

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                  P+ I+Y+  ++  C       A+ +    + +GI  +  TY  L+ GL +  K
Sbjct: 418 -------PNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGK 470



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 157/342 (45%), Gaps = 61/342 (17%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           + +  +++   + +  + AL L  +M+   I+   FT+N +I   SQ G    +  +  +
Sbjct: 71  IQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGK 130

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +L+ G  P+  TFNT+I G C +G + +AL FH+K+V + F  D V+   L++GLC+ G 
Sbjct: 131 ILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGR 190

Query: 376 LEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD---- 429
           +  AL+  +   + GK V  ++V YN +I ++CK + + DAF L S+M  K++ PD    
Sbjct: 191 ITAALQLLKR--VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTC 248

Query: 430 -------------------------------RYTYAAIHTALVESGRLEEAQKFTSIMVE 458
                                           YT++ +  A  + G+++EA+    + ++
Sbjct: 249 NSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMK 308

Query: 459 TGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKINEHCSQGRYK 499
              I   VV  N+                   S     +  +  SY+  IN  C      
Sbjct: 309 KDII-LDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK--SISKAVD 539
           +A+ +FEE R + I  N  TY +L++GL K  K   + K VD
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVD 409



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 53/310 (17%)

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + +DE+ N        +  +   P    +N ++  L ++     A+ +  ++  +G++ D
Sbjct: 45  HHQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSD 104

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             TFN +I+ F   G    +     K+++K F P+ +T N L+ GLC +G + +AL F  
Sbjct: 105 FFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHD 164

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRL--------------------------------- 411
             + +G  +D V+Y TLI+ LCK  R+                                 
Sbjct: 165 KVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAK 224

Query: 412 --EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
              DAF L S+M  K++ PD +T  ++       G+L+EA          G ++  ++  
Sbjct: 225 LVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEA---------VGLLHKMIL-- 273

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 E I+P   ++S  ++  C +G+ K+A  +   T +K I ++  TY +LM+G   
Sbjct: 274 ------ENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYC- 326

Query: 530 RRKSISKAVD 539
             K I+KA D
Sbjct: 327 LVKEINKAKD 336


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 258/552 (46%), Gaps = 60/552 (10%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + ++ +  A+ ++ + + V     +M   G+  N  T NI+++ +C+   L  A  
Sbjct: 66  LPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFS 125

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           VV    +    P+  T++ LING+C  G + EA  L   M  +K  P+VVT NTLIN   
Sbjct: 126 VVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLC 185

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  EA  LID + ++G + N +T+  ++   CK G    A  + R MEE       V
Sbjct: 186 LKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVV 245

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ +ID+ CK GN+++A  + + M  KG+K + +  ++I+  LC + + D+   +L   
Sbjct: 246 QYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREM 305

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             R    + V++  LI  + ++ K   A +L++EM  R I P T TY+++I G  +  + 
Sbjct: 306 IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRL 365

Query: 307 EQAIDMLN-----------------------------------ELLQSGMIPDETTFNTI 331
            +A  ML+                                   E+   G++ D  T+NT+
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF----RSWI 387
           + GFC  G++  A +   +MV +   P +VT  ILL GLC  G L+KAL+ F    +S +
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           + G  +    YN +I  +C   +++DA+ L   +  K + PD  TY  +   L + G L 
Sbjct: 486 ILGIGI----YNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLS 541

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA      M E G                   PS  +Y+  I  H        ++++ EE
Sbjct: 542 EADMLFRKMKEDG-----------------CAPSDCTYNILIRAHLGGSGVISSVELIEE 584

Query: 508 TRQKGIAINKST 519
            + +G A + ST
Sbjct: 585 MKMRGFAADAST 596



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 234/441 (53%), Gaps = 1/441 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT NT+++ L  KG++ E   L+  M K G   N  TY  +++  CK G    A+ +
Sbjct: 172 PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDL 231

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +      V  Y+++I+  C  G L++A  L  EME   +  DVV Y+++I     
Sbjct: 232 FRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCN 291

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +  K++ E+    I PN VT + +I  + KEGK+ +A ++   M   G +PD +T
Sbjct: 292 DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTIT 351

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++LID  CK   + EA +M+D+M  KG + N +T + ++++ C  K++D    L    S
Sbjct: 352 YSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D V+Y TL+ G+ +  K N A +L+ EM  R + PS  TY  ++ GL  +G+ +
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  ++ +S MI     +N IIHG C+  +V+ A      +  K  KPD++T N+++
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC++G L +A   FR     G A    TYN LI +      +  +  L+ EM+ +   
Sbjct: 532 GGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFA 591

Query: 428 PDRYTYAAIHTALVESGRLEE 448
            D  T   +   ++  GRL++
Sbjct: 592 ADASTIKMV-VVMLSDGRLDK 611



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 238/470 (50%), Gaps = 6/470 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG  P+ +T++T+++    +G+++E   L+  M +    PN  T N L++G C  G + E
Sbjct: 133 FGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTE 192

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ ++D M +     +  TY  ++N  C +G    A  L ++ME   +   VV Y+ +I+
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVID 252

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G   +A  L +E++  GIK + V ++ +I   C +G+ D   K++R M      P
Sbjct: 253 SLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP 312

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VT++ LID   K G + EA  + + M  +G+  +TIT ++++   C E +L EA  +L
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    +G   + V+Y  LI  Y + ++ +  ++L+ E+  + ++  T TYN ++ G  QS
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQS 432

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK   A ++  E++  G+ P   T+  ++ G C  G+++KAL+   KM +      I   
Sbjct: 433 GKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIY 492

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI++ G+C    ++ A   F S  +KG   D +TYN +I  LCK+  L +A  L  +M+E
Sbjct: 493 NIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKE 552

Query: 424 KKLGPDRYTYAAIHTA------LVESGRLEEAQKFTSIMVETGKINHQVV 467
               P   TY  +  A      ++ S  L E  K      +   I   VV
Sbjct: 553 DGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVV 602



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 231/472 (48%), Gaps = 17/472 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + + M Q++ LP +  ++ L +        +      KEM+   +  ++ T N 
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F    + + AF ++    + G +PN +T + +I  +C EG++ +A  +V  M E  
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ VT NTLI+  C  G + EA  ++D M + G + N IT   +L+ +C       A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     +R      V Y  +I    +D   + AL L++EM+ + I      Y+++I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ +    ML E++   +IP+  TF+ +I  F  EG++ +A + +N+MV +   PD 
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT 349

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T + L+ G C+E  L +A +     + KG   + VTY+ LI+S CK +R+++   L  E
Sbjct: 350 ITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCE 409

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +  K L  D  TY  +     +SG+L  A++    MV  G                 + P
Sbjct: 410 ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG-----------------VPP 452

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           S ++Y   ++  C  G  + AL+IFE+ ++  + +    Y  +++G+    K
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 220/416 (52%), Gaps = 3/416 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC  + +TY  +L+ + K G      DL   M+++ +  +   Y+I++   CK G 
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ + + M       DV  Y+ +I G CN G  ++  ++ +EM    ++P+VVT++ 
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ +EA +L +E+   GI P+ +T++ +I  +CKE ++ +A +++  M   G
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY+ LI++ CKA  ++   R+   +  KGL  +T+T NT++   C   KL+ A 
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAK 439

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      RG     V+YG L+ G   + +  +AL+++++M++ +++     YN +I G+
Sbjct: 440 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGM 499

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + K + A  +   L   G+ PD  T+N +I G C +G + +A     KM E    P  
Sbjct: 500 CNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSD 559

Query: 361 VTCNILLSG-LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T NIL+   L   G++  +++      ++G A D+ T   ++  L  + RL+  F
Sbjct: 560 CTYNILIRAHLGGSGVIS-SVELIEEMKMRGFAADASTIKMVVVML-SDGRLDKTF 613



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 168/314 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G   +P+ VT++ ++D   K+GKL E ++L ++M  +G+ P+  TY+ L+ G+CK   
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA +++DLM      P++ TY++LIN +C A  ++   RL  E+ S  L+ D VTYNT
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT 424

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F +SG+   A +L  E+   G+ P+ VT+ I++   C  G++ KA +I   M+++ 
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                  YN +I   C A  +++A+ +   +  KG+K + +T N ++  LC +  L EA 
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEAD 544

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ML     + G    + +Y  LI  +        +++L +EMK R       T   ++  L
Sbjct: 545 MLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604

Query: 301 SQSGKTEQAIDMLN 314
           S     +  +DML+
Sbjct: 605 SDGRLDKTFLDMLS 618



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 190/392 (48%), Gaps = 30/392 (7%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+++A  +  +M ++   P  + ++ L  A  +    +        M   G++ N  T+N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C ++KL  A+ ++  A K G+  + +++ TLI G+  + + + A+ L D M E 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +  P+  T N +I GL   G+  +A+ +++ +++ G   +E T+  +++  C  G    A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L    KM E+S K  +V  +I++  LC++G L+ AL  F    +KG   D V Y+++I  
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC + R +D   +L EM  + + P+  T++A+    V+ G+L EA++  + MV  G    
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARG---- 344

Query: 465 QVVQPNTSKTPEEID------------------------PSSISYSEKINEHCSQGRYKD 500
             + P+T      ID                        P+ ++YS  IN +C   R  +
Sbjct: 345 --IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDN 402

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +++F E   KG+  +  TY  L+ G  +  K
Sbjct: 403 GMRLFCEISSKGLVADTVTYNTLVQGFCQSGK 434



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 17/273 (6%)

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
           +VSY   +     D K N A+ L++ M + + +PS   ++ +   +++  + +  +    
Sbjct: 34  KVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCK 93

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           E+  +G+  +  T N +I+ FC + ++  A     + ++  F+P+ +T + L++G C EG
Sbjct: 94  EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            + +A+      +      + VT NTLI+ LC + R+ +A  L+  M +     +  TY 
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   + +SG    A      M E                   I  S + YS  I+  C 
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEE-----------------RSIKASVVQYSIVIDSLCK 256

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            G   DAL +F E   KGI  +   Y +++ GL
Sbjct: 257 DGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 231/475 (48%), Gaps = 35/475 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD V+Y T+++ L ++G+L++   L  +M  QG+ PN  TYN L+ GYC  G  KEA
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M ++   PDV TYN L+   C  G   EA ++   M      PD   Y TL++ 
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G  ++  +L+D +  +G +P+    NI+I  Y K G +D+A      M + G  P+
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPN 380

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY T++DA C+ G +++A    D +  +GL  N +   T++H LC   K D+A  L  
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG   + + + TL+    ++    RA  ++D M    +     TY  +I G    G
Sbjct: 441 EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDG 500

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV--- 361
           K ++A  +L  ++  G+ P+E T+NTII+G+C  G++E A     +M  K   P IV   
Sbjct: 501 KVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYS 560

Query: 362 --------------------------------TCNILLSGLCREGILEKALKFFRSWILK 389
                                           T NI+L GLC+    + AL+ F +  L 
Sbjct: 561 TILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLI 620

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
              + + T+N +I +L K  R ++A  L + +  + L P+  TY  +  +L+E G
Sbjct: 621 DFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 266/543 (48%), Gaps = 23/543 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDL-LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           +T++ +L  L    + ++  D+ L  M   G  PN  +YNIL+ G C     ++A+ ++ 
Sbjct: 132 ITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLH 191

Query: 70  LM----TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            M    T+    PDV +Y  +ING    G L++A+ L  EM    + P+ +TYN L++ +
Sbjct: 192 TMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGY 251

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             SG+  EA  +  ++   G++P+ VT+N ++ + CK G+  +A K+  +M + G  PD 
Sbjct: 252 CSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDS 311

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             Y TL+      G + +  +++DVM R G + +    N ++        +DEA +  + 
Sbjct: 312 SIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSK 371

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             ++G + + V+YGT++    R  K + A+  +D +    + P+   +  +I GL    K
Sbjct: 372 MRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDK 431

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A ++  E++  G+ P+   FNT+++  C EG V +A    + MV    + D++T   
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C +G +++A K     +L G   + VTYNT+I+  CK  R+EDA  L  +M  K 
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---------KINHQVVQPNTSKTPE 476
           + P    Y+ I   L ++ R+  A++    M++ G          I   + Q N +    
Sbjct: 552 VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDAL 611

Query: 477 ---------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                    +    + +++  I+     GR+ +A  +F     +G+  N  TY  +M  L
Sbjct: 612 RMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 671

Query: 528 IKR 530
           I++
Sbjct: 672 IEQ 674



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 245/507 (48%), Gaps = 26/507 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYNT++  L K G+  E R +   M K+G  P+ + Y  L+ GY   G+L + 
Sbjct: 271 GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQM 330

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++D+M +N + PD + +N+LI  +   GM++EA     +M    L P++VTY T+++ 
Sbjct: 331 HQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDA 390

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A    D L   G+ PN V    +I   C   K DKA ++   M   G  P+
Sbjct: 391 LCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPN 450

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + +NTL++  CK G +  A  + D+M R  ++ + IT  T++   C + K+DEA  LL 
Sbjct: 451 TIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLE 510

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   +EV+Y T+I GY ++ +   A  L+ +M  + + P    Y+ ++ GL Q+ 
Sbjct: 511 GMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTR 570

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A ++   +++ G+     T+N I+ G C     + AL+  + +    F     T N
Sbjct: 571 RIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFN 630

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I++  L + G  ++A   F S + +G   + VTY  ++ SL ++  LE+   L   +E+ 
Sbjct: 631 IMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKN 690

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTS------------------IMVETGKINHQV 466
               D     A+   L + G + +A  + S                   +V +GK +  +
Sbjct: 691 GCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFLVSSGKYDQHI 750

Query: 467 VQPNTSKTPEEIDPSSIS---YSEKIN 490
                +  PE+  P++ S   +S+K N
Sbjct: 751 -----NSIPEKYRPTAKSRAVFSQKKN 772



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 213/478 (44%), Gaps = 60/478 (12%)

Query: 114 DVVTYNTLI----------------NRFFESGRSMEAF-------------KLIDELD-- 142
           D+ TY+ +I                 R   +G + +A              +  D +D  
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154

Query: 143 -----EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM----EENGFSPDCVTYNTLID 193
                  G  PNA ++NI++K  C E +  +A  ++  M       G  PD V+Y T+I+
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
              + G +++A+ + D M  +G+  N IT N +LH  C   K  EA  +     + G   
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D V+Y TL+    ++ ++  A K++D M ++   P +  Y  ++ G +  G   Q   +L
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           + ++++G  PD   FN +I  +   G V++A+   +KM ++   P+IVT   ++  LCR 
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G ++ A+  F   I +G   + V + TLI  LC   + + A  L  EM  + + P+   +
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 434 AAIHTALVESGRLEEAQKFTSIMVET-------------------GKINHQVVQPNTSKT 474
             +   L + G +  A+    +MV                     GK++ +  +      
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVD-EATKLLEGMV 513

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            + + P+ ++Y+  IN +C  GR +DA  +F +   KG+      Y  +++GL + R+
Sbjct: 514 LDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRR 571



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 27/214 (12%)

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL   N+M     + D+ T +I++    R G L+ A       I  G    ++T++ L+ 
Sbjct: 84  ALSLFNRMP----RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139

Query: 404 SLCKERRLEDAFGL-LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE---- 458
            LC ++R  DA  + L  M      P+ ++Y  +   L +  R ++A      M+     
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199

Query: 459 ----------TGKINHQVVQPNTSKT--------PEEIDPSSISYSEKINEHCSQGRYKD 500
                     T  IN  + +    K          + + P+ I+Y+  ++ +CS G+ K+
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           A+ IF +  + G+  +  TY  LM  L K  +S+
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSM 293


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 268/588 (45%), Gaps = 71/588 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+   +  ++  L K G++ + R L   M + G+VP+  TYN ++ GY KLG + +A
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 65  MRVVDLMTQNKSLPDVWTYNMLI----------------------------------NGW 90
           +++ +LM +N   PD WTYN LI                                  NG+
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C A   ++A R++ +M S K   D+  +  LIN   +  R  EA +L++E+  +G+ PN 
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           +T+  +I  YCK GK+D A ++++ ME +G  P+  TYN+L+    K   + +A  ++  
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M + G+  N IT  T+L   C E   D A+ L     + G   DE +Y  L        K
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC---K 579

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
           A RA + +  +  + +  +   Y  +I G S++G T+ A  ++  ++  G  PD  T++ 
Sbjct: 580 AGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 639

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++H  C + ++ +AL   ++M  +  K  I    IL+  + REG  + A + +      G
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 699

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
               + TY   I+S CKE RLEDA  L+ +ME + + PD  TY  +       G ++ A 
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 451 KFTSIMVETG----------------KINHQVVQP-NTSK-----------------TPE 476
                MV                   K N   V+  +TS                     
Sbjct: 760 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 819

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            ++P+  +YS  I   C  GR ++A  + +    KG++ N+  Y  L+
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 257/535 (48%), Gaps = 16/535 (2%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN  L +L +      +  + S + + GL+P+  TYN ++  YCK G L  A R   L+ 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +    P+ +T N L+ G+C  G L +A  L   M  +    +  +Y  LI    E+    
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L   +   G  PN      +I   CK G++  A  +   M +NG  P  +TYN +I
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
               K G M +A ++ ++M + G   +  T NT+++ LC ++K +EA  LLN+A K G+ 
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFT 389

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
              V++  LI GY   EK + AL++ ++M   +       +  +I  L +  + ++A ++
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE+  +G++P+  T+ +II G+C  G+V+ AL+    M     +P+  T N L+ GL +
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +  L KA+         G   + +TY TL+   C E   ++AF L   ME+  L PD + 
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 433 YAAIHTALVESGRLEEAQKF-TSIMVETGKINHQVVQPNTSKT--------------PEE 477
           YA +  AL ++GR EEA  F     V   K+ +  +    SK                E 
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             P S +YS  ++  C Q R  +AL I ++   +GI      Y  L++ +++  K
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 237/514 (46%), Gaps = 57/514 (11%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D   +  ++++L KK +L E ++LL+++   GLVPN  TY  ++ GYCK G +  A+
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+ +M ++   P+ WTYN L+ G      L +A  L  +M+   ++P+V+TY TL+   
Sbjct: 483 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK-IVRNMEENGFSPD 184
            +      AF+L + ++++G+KP+   + ++    CK G+ ++A   IVR     G +  
Sbjct: 543 CDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK----GVALT 598

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y TLID   KAGN + A  +++ M  +G   ++ T + +LH LC +K+L+EA  +L+
Sbjct: 599 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S RG      +Y  LI    R+ K + A ++++EM      PS  TY   I    + G
Sbjct: 659 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEG 718

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL------------------- 345
           + E A D++ ++ + G+ PD  T+N +I G    G +++A                    
Sbjct: 719 RLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC 778

Query: 346 --------------------------------QFHNKMVEKSFKPDIVTCNILLSGLCRE 373
                                           Q   +MV+    P + T + L++G C+ 
Sbjct: 779 LLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKA 838

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G LE+A         KG + +   Y  LI   C  +  E A   +S M E    P   +Y
Sbjct: 839 GRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESY 898

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             +   L   G  E+ +     ++E G  NH  V
Sbjct: 899 RLLVVGLCNEGDFEKVKSLFCDLLELG-YNHDEV 931



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 223/495 (45%), Gaps = 58/495 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  TYN+++  L K  KL++   LL+ M+K G++PN  TY  L+ G C    
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA--FRLRKEMESLKLLPDVVTY 118
              A R+ ++M QN   PD   Y +L +  C AG  EEA  F +RK +   K     V Y
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTK-----VYY 602

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            TLI+ F ++G +  A  LI+ + + G  P++ T+++++   CK+ ++++A  I+  M  
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G       Y  LID   + G  + A RM + M   G K +  T    +++ C E +L++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL----------------------- 275
           A  L+    + G   D V+Y  LI G       +RA                        
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 276 ----------------------------KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                                       +L + M +  + P+  TY+++I G  ++G+ E
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L+ +   G+ P+E  +  +I   C     EKAL F + M E  F+P + +  +L+
Sbjct: 843 EACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC EG  EK    F   +  G   D V +  L   L K   ++  F +LS ME++   
Sbjct: 903 VGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCC 962

Query: 428 PDRYTYAAIHTALVE 442
               TYA +   + E
Sbjct: 963 ISSQTYALVTNKMHE 977


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 255/515 (49%), Gaps = 17/515 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN +   L + G ++E+  L  DM   G+ PN  ++N +V+ +CK+G +  A      +
Sbjct: 157 SYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGL 216

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +     D +TY  LI G+C    L +A+++ + M     L + V+Y  LI+ F E G+ 
Sbjct: 217 MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI 276

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +L  ++ E G  P+  T+ +++  +C+ GK  +A K    M ENG  P+  TY  L
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CK G M+E   M+  M  KGL  + +  N ++   C    +++A  +L+S      
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKV 396

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y  LI G+ R +  +RA+ L ++M E ++ P+  TYN +I GL ++   + A  
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWR 456

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + +++ G +PD+ TF   I   C  G+VE+A Q    + EK  + +      L+ G C
Sbjct: 457 LHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYC 516

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +      A   F+  + +G   +S+T+N L+  L KE ++EDA  L+  M +    P  +
Sbjct: 517 KAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH 576

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   ++     + A  F   M+ +G       QPN            ++Y+  I  
Sbjct: 577 TYTILIEEILRESDFDRANMFLDQMISSG------CQPNV-----------VTYTAFIKA 619

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           +C QGR  +A ++  + +++GI ++   Y  L+N 
Sbjct: 620 YCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 274/534 (51%), Gaps = 9/534 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCL + V+Y  ++    + GK++E  +L   MK+ G  P+  TY +LV+ +C++G   EA
Sbjct: 255 GCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEA 314

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++  + M +N   P+V+TY +LI+ +C  G ++E   +   M    L+  VV +N LI+ 
Sbjct: 315 LKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDG 374

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G   +A  ++D +  + + PN+ T+N +I  +C++  +D+A  ++  M EN  SP+
Sbjct: 375 YCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   CKA  ++ A+R+  +M + G   +  T    +  LC   K+++A+ +  
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFE 494

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++    +E  Y  LI GY + EK + A  L+  M      P++ T+N ++ GL + G
Sbjct: 495 SLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEG 554

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E A+ +++ + +    P   T+  +I     E   ++A  F ++M+    +P++VT  
Sbjct: 555 KVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYT 614

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             +   CR+G L +A +       +G  +DS  Y+ L+++     +L+ AFG+L  M + 
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDT 674

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKF----TSIMVETGKI----NHQVVQPNTSKTPE 476
              P R TY+ +   L+     +E        T+I V+   I    + +++     K  E
Sbjct: 675 GCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVE 734

Query: 477 E-IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +   P+  +YS+ I   C       A ++F   ++ GI+ +++ + +L++   K
Sbjct: 735 QGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCK 788



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 272/570 (47%), Gaps = 46/570 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +++NT+++A  K G +   +     + K G   +  TY  L+ GYCK+  L +A
Sbjct: 185 GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDA 244

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V ++M Q   L +  +Y  LI+G+C  G ++EA  L  +M+     PDV TY  L+  
Sbjct: 245 YKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAA 304

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F E G+  EA K  +E+ E+GI+PN  T+ ++I ++CK GK+D+  +++  M E G    
Sbjct: 305 FCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSS 364

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMG-------------------RK----------- 214
            V +N LID  CK G ME+A  ++D M                    RK           
Sbjct: 365 VVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLN 424

Query: 215 -----GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                 L  N +T NT++H LC  + +D A+ L +   K G+  D+ ++   I    +  
Sbjct: 425 KMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMG 484

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K  +A ++++ +KE+    + F Y A+I G  ++ K   A  +   +L  G  P+  TFN
Sbjct: 485 KVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFN 544

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            ++ G   EG+VE A+   + M +   KP + T  IL+  + RE   ++A  F    I  
Sbjct: 545 VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS 604

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + VTY   I + C++ RL +A  ++ +++E+ +  D + Y  +  A    G+L+ A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664

Query: 450 QKFTSIMVETG----------KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
                 M +TG           + H + +   +K    +D +S + S           ++
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFE-KYNKEGMGLDLNSTNISVDNANIWKIADFE 723

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               +FE+  ++G   N +TY  L+ GL K
Sbjct: 724 IITMLFEKMVEQGCVPNVNTYSKLIKGLCK 753



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 224/480 (46%), Gaps = 40/480 (8%)

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-------ESLKLLPDVVTYN------ 119
           Q+  +  V +Y  L+      G L  A  +R  M          + + +++T++      
Sbjct: 96  QHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSV 155

Query: 120 TLINRFFESGRSMEAFKLIDELD-------EHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           T  NR F     +  F LIDEL+         G++PN ++ N M+  +CK G +  A   
Sbjct: 156 TSYNRLF---MVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAY 212

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              + + GF  D  TY +LI   CK   + +A+++ ++M ++G   N ++   ++H  C 
Sbjct: 213 FCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCE 272

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             K+DEA  L     + G + D  +Y  L+  +    K   ALK ++EM E  I P+ +T
Sbjct: 273 VGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT 332

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  +I    + GK ++ ++ML+ +L+ G++     FN +I G+C  G +E A+   + M 
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                P+  T N L+ G CR+  +++A+           + + VTYNTLI  LCK R ++
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A+ L   M +    PD+ T+ A    L + G++E+A              HQV +    
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQA--------------HQVFESLKE 498

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           K  E    +   Y+  I+ +C   ++ DA  +F+    +G   N  T+  L++GL K  K
Sbjct: 499 KHAE---ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 229/524 (43%), Gaps = 61/524 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  ++D   K GK++E  ++LS M ++GLV +   +N L+ GYCK G +++A
Sbjct: 325 GIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDA 384

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN- 123
           + V+D M  NK  P+  TYN LI G+C    ++ A  L  +M   KL P++VTYNTLI+ 
Sbjct: 385 ICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHG 444

Query: 124 ----RFFES------------------------------GRSMEAFKLIDELDEHGIKPN 149
               R  +S                              G+  +A ++ + L E   + N
Sbjct: 445 LCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEAN 504

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
              +  +I  YCK  K   A  + + M   G  P+ +T+N L+D   K G +E+A  ++D
Sbjct: 505 EFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVD 564

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           VMG+   K    T   ++  +  E   D A M L+     G   + V+Y   I  Y R  
Sbjct: 565 VMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   A ++  ++KE  I+  +F Y+ ++      G+ + A  +L  +  +G  P   T++
Sbjct: 625 RLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYS 684

Query: 330 TIIHGFCSE--------------------------GQVEKALQFHNKMVEKSFKPDIVTC 363
            ++     E                             E       KMVE+   P++ T 
Sbjct: 685 ILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTY 744

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + L+ GLC+   L  A + F      G +     +N+L+SS CK    E+A  LL  M E
Sbjct: 745 SKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMME 804

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
                   +Y  +   L E G  E+A++    ++  G    +VV
Sbjct: 805 YNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVV 848



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 215/454 (47%), Gaps = 30/454 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTYNT++  L K   ++    L   M K G VP++ T+   +   CK+G +++A +V
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + + +  +  + + Y  LI+G+C A    +A  L K M      P+ +T+N L++   +
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L+D + +   KP   T+ I+I+   +E   D+A   +  M  +G  P+ VT
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVT 612

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y   I A C+ G + EA  M+  +  +G+ +++   + +++   C  +LD A+ +L    
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMF 672

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANR---------------------------ALKLWDE 280
             G      +Y  L+  +   EK N+                              L+++
Sbjct: 673 DTGCEPSRQTYSILLK-HLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEK 731

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M E+  +P+  TY+ +I GL +      A  + N + +SG+ P E   N+++   C  G 
Sbjct: 732 MVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGM 791

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
            E+AL+  + M+E +    + +  +L+ GL  +G  EKA + FRS +  G   D V +  
Sbjct: 792 HEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKV 851

Query: 401 LISSLCKERRLEDAFGLLSEMEEK--KLGPDRYT 432
           L+  L ++  +++   L   ME+   +L  D +T
Sbjct: 852 LLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHT 885



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 26/244 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D+  Y+ +++A    G+L+    +L  M   G  P+R TY+IL+       + KE 
Sbjct: 640 GILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG 699

Query: 65  M-----------------RVVDL---------MTQNKSLPDVWTYNMLINGWCNAGMLEE 98
           M                 ++ D          M +   +P+V TY+ LI G C    L  
Sbjct: 700 MGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSL 759

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           AFRL   M+   + P    +N+L++   + G   EA +L+D + E+    +  ++ +++ 
Sbjct: 760 AFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVC 819

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
              ++G  +KA +I R++   G++ D V +  L+D   + G ++E  ++ D+M + G ++
Sbjct: 820 GLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRL 879

Query: 219 NTIT 222
           ++ T
Sbjct: 880 HSDT 883



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 80/152 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P+  TY+ ++  L K   L+    L + MK+ G+ P+   +N L+S  CKLG  +EA
Sbjct: 736 GCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEA 795

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R++D M +   L  + +Y +L+ G    G  E+A  + + + S     D V +  L++ 
Sbjct: 796 LRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDG 855

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
               G   E  +L D +++ G + ++ TH ++
Sbjct: 856 LVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 236/456 (51%), Gaps = 1/456 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +    ++   F    + +   ++  ++K G  P+   YN L++G+CK+  + +A RV
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 180

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD  TYN++I   C+ G L+ A ++  ++ S    P V+TY  LI     
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL+DE+   G+KP+  T+N +I+  CKEG +D+A ++VRN+E  G  PD ++
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+ A    G  EE  ++M  M  +    N +T + ++ TLC + K++EA  LL    
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   D  SY  LI  + R+ + + A++  + M     +P    YN ++  L ++GK +
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA+++  +L + G  P+ +++NT+     S G   +AL    +M+     PD +T N ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           S LCREG++++A +              VTYN ++   CK  R+EDA  +L  M      
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           P+  TY  +   +  +G   EA +  + +V    I+
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 1/439 (0%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           + G   E   LL  M ++G  P+      L+ G+  L  + +A+RV++++ +    PDV+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKFGQPDVF 159

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            YN LING+C    +++A R+   M S    PD VTYN +I      G+   A K++++L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
                +P  +T+ I+I+    EG +D+A K++  M   G  PD  TYNT+I   CK G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + AF M+  +  KG + + I+ N +L  L  + K +E   L+          + V+Y  L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           IT   RD K   A+ L   MKE+ + P  ++Y+ +I    + G+ + AI+ L  ++  G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD   +NT++   C  G+ ++AL+   K+ E    P+  + N + S L   G   +AL 
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                +  G   D +TYN++IS LC+E  +++AF LL +M   +  P   TY  +     
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 442 ESGRLEEAQKFTSIMVETG 460
           ++ R+E+A      MV  G
Sbjct: 520 KAHRIEDAINVLESMVGNG 538



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 218/405 (53%), Gaps = 1/405 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E FG  PD   YN +++   K  ++++   +L  M+ +   P+  TYNI++   C  G 
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A++V++ +  +   P V TY +LI      G ++EA +L  EM S  L PD+ TYNT
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + G    AF+++  L+  G +P+ +++NI+++    +GK ++  K++  M    
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY+ LI   C+ G +EEA  ++ +M  KGL  +  + + ++   C E +LD A 
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L +    G   D V+Y T++    ++ KA++AL+++ ++ E    P++ +YN M   L
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG   +A+ M+ E++ +G+ PDE T+N++I   C EG V++A +    M    F P +
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT NI+L G C+   +E A+    S +  G   +  TY  LI  +
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 235/472 (49%), Gaps = 18/472 (3%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           C+ G   E++ +++ M +    PDV     LI G+     + +A R+ + +E     PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
             YN LIN F +  R  +A +++D +      P+ VT+NIMI   C  GK+D A K++  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           +  +   P  +TY  LI+A    G ++EA ++MD M  +GLK +  T NTI+  +C E  
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D A+ ++ +   +G   D +SY  L+       K     KL  +M   +  P+  TY+ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + GK E+A+++L  + + G+ PD  +++ +I  FC EG+++ A++F   M+   
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PDIV  N +L+ LC+ G  ++AL+ F      G + +S +YNT+ S+L        A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            ++ EM    + PD  TY ++ + L   G ++EA +    M                   
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC---------------- 502

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            E  PS ++Y+  +   C   R +DA+ + E     G   N++TY  L+ G+
Sbjct: 503 -EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 191/359 (53%), Gaps = 8/359 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P  +TY  +++A   +G ++E   L+ +M  +GL P+  TYN ++ G CK G +  A 
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +V  +      PDV +YN+L+    N G  EE  +L  +M S K  P+VVTY+ LI   
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G+  EA  L+  + E G+ P+A +++ +I  +C+EG++D A + +  M  +G  PD 
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-CCEKKLDEAYMLLN 244
           V YNT++   CK G  ++A  +   +G  G   N+ + NT+   L     K+   +M+L 
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S  G   DE++Y ++I+   R+   + A +L  +M+  +  PS  TYN ++ G  ++ 
Sbjct: 464 MMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV------EKSFK 357
           + E AI++L  ++ +G  P+ETT+  +I G    G   +A++  N +V      E SFK
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFK 581



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 210/442 (47%), Gaps = 18/442 (4%)

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C +G   E+  L + M      PDV+    LI  FF      +A ++++ L++ G +P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             +N +I  +CK  +ID A +++  M    FSPD VTYN +I + C  G ++ A ++++ 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +     +   IT   ++     E  +DEA  L++    RG   D  +Y T+I G  ++  
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            +RA ++   ++ +   P   +YN ++  L   GK E+   ++ ++      P+  T++ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I   C +G++E+A+     M EK   PD  + + L++  CREG L+ A++F  + I  G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D V YNT++++LCK  + + A  +  ++ E    P+  +Y  + +AL  SG    A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                M+  G                 IDP  I+Y+  I+  C +G   +A ++  + R 
Sbjct: 459 HMILEMMSNG-----------------IDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
                +  TY  ++ G  K  +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHR 523



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 53/368 (14%)

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           +C++GN  E+  +++ M RKG   + I    ++      + + +A  ++    K G   D
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-D 157

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y  LI G+ +  + + A ++ D M+ +   P T TYN MI  L   GK + A+ +LN
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           +LL     P   T+  +I     EG V++AL+  ++M+ +  KPD+ T N ++ G+C+EG
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 375 ILEKALKFFRSWILKGKAVDSVTYN----------------------------------- 399
           ++++A +  R+  LKG   D ++YN                                   
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI++LC++ ++E+A  LL  M+EK L PD Y+Y  +  A    GRL+ A +F   M+  
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G +                 P  ++Y+  +   C  G+   AL+IF +  + G + N S+
Sbjct: 398 GCL-----------------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440

Query: 520 YMNLMNGL 527
           Y  + + L
Sbjct: 441 YNTMFSAL 448



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 150/304 (49%), Gaps = 18/304 (5%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           I H  C      E+  LL +  ++GY  D +    LI G+F      +A+++  E+ E+ 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P  F YNA+I G  +  + + A  +L+ +      PD  T+N +I   CS G+++ AL
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  N+++  + +P ++T  IL+     EG +++ALK     + +G   D  TYNT+I  +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CKE  ++ AF ++  +E K   PD  +Y  +  AL+  G+ EE +K  + M         
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS------- 326

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                     E+ DP+ ++YS  I   C  G+ ++A+ + +  ++KG+  +  +Y  L+ 
Sbjct: 327 ----------EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 526 GLIK 529
              +
Sbjct: 377 AFCR 380



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 18/205 (8%)

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           +T    I H  C  G   ++L     MV K + PD++ C  L+ G      + KA++   
Sbjct: 89  DTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G+  D   YN LI+  CK  R++DA  +L  M  K   PD  TY  +  +L   G
Sbjct: 149 ILEKFGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L+ A           K+ +Q++  N         P+ I+Y+  I     +G   +AL++
Sbjct: 208 KLDLAL----------KVLNQLLSDNCQ-------PTVITYTILIEATMLEGGVDEALKL 250

Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
            +E   +G+  +  TY  ++ G+ K
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCK 275


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 236/456 (51%), Gaps = 1/456 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +    ++   F    + +   ++  ++K G  P+   YN L++G+CK+  + +A RV
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 180

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD  TYN++I   C+ G L+ A ++  ++ S    P V+TY  LI     
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL+DE+   G+KP+  T+N +I+  CKEG +D+A ++VRN+E  G  PD ++
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVIS 300

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+ A    G  EE  ++M  M  +    N +T + ++ TLC + K++EA  LL    
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   D  SY  LI  + R+ + + A++  + M     +P    YN ++  L ++GK +
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA+++  +L + G  P+ +++NT+     S G   +AL    +M+     PD +T N ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           S LCREG++++A +              VTYN ++   CK  R+EDA  +L  M      
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           P+  TY  +   +  +G   EA +  + +V    I+
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 1/439 (0%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           + G   E   LL  M ++G  P+      L+ G+  L  + +A+RV++++ +    PDV+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL-EKFGQPDVF 159

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            YN LING+C    +++A R+   M S    PD VTYN +I      G+   A K++++L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
                +P  +T+ I+I+    EG +D+A K++  M   G  PD  TYNT+I   CK G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + AF M+  +  KG + + I+ N +L  L  + K +E   L+          + V+Y  L
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           IT   RD K   A+ L   MKE+ + P  ++Y+ +I    + G+ + AI+ L  ++  G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD   +NT++   C  G+ ++AL+   K+ E    P+  + N + S L   G   +AL 
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                +  G   D +TYN++IS LC+E  +++AF LL +M   +  P   TY  +     
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 442 ESGRLEEAQKFTSIMVETG 460
           ++ R+E+A      MV  G
Sbjct: 520 KAHRIEDAINVLESMVGNG 538



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 218/405 (53%), Gaps = 1/405 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E FG  PD   YN +++   K  ++++   +L  M+ +   P+  TYNI++   C  G 
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A++V++ +  +   P V TY +LI      G ++EA +L  EM S  L PD+ TYNT
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + G    AF+++  L+  G +P+ +++NI+++    +GK ++  K++  M    
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY+ LI   C+ G +EEA  ++ +M  KGL  +  + + ++   C E +LD A 
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L +    G   D V+Y T++    ++ KA++AL+++ ++ E    P++ +YN M   L
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG   +A+ M+ E++ +G+ PDE T+N++I   C EG V++A +    M    F P +
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           VT NI+L G C+   +E A+    S +  G   +  TY  LI  +
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 235/472 (49%), Gaps = 18/472 (3%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           C+ G   E++ +++ M +    PDV     LI G+     + +A R+ + +E     PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
             YN LIN F +  R  +A +++D +      P+ VT+NIMI   C  GK+D A K++  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           +  +   P  +TY  LI+A    G ++EA ++MD M  +GLK +  T NTI+  +C E  
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D A+ ++ +   +G   D +SY  L+       K     KL  +M   +  P+  TY+ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + GK E+A+++L  + + G+ PD  +++ +I  FC EG+++ A++F   M+   
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PDIV  N +L+ LC+ G  ++AL+ F      G + +S +YNT+ S+L        A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            ++ EM    + PD  TY ++ + L   G ++EA +    M                   
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC---------------- 502

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            E  PS ++Y+  +   C   R +DA+ + E     G   N++TY  L+ G+
Sbjct: 503 -EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 192/359 (53%), Gaps = 8/359 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P  +TY  +++A   +G ++E   L+ +M  +GL P+  TYN ++ G CK G +  A 
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +V  +    S PDV +YN+L+    N G  EE  +L  +M S K  P+VVTY+ LI   
Sbjct: 284 EMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G+  EA  L+  + E G+ P+A +++ +I  +C+EG++D A + +  M  +G  PD 
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-CCEKKLDEAYMLLN 244
           V YNT++   CK G  ++A  +   +G  G   N+ + NT+   L     K+   +M+L 
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S  G   DE++Y ++I+   R+   + A +L  +M+  +  PS  TYN ++ G  ++ 
Sbjct: 464 MMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV------EKSFK 357
           + E AI++L  ++ +G  P+ETT+  +I G    G   +A++  N +V      E SFK
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFK 581



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 210/442 (47%), Gaps = 18/442 (4%)

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C +G   E+  L + M      PDV+    LI  FF      +A ++++ L++ G +P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             +N +I  +CK  +ID A +++  M    FSPD VTYN +I + C  G ++ A ++++ 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +     +   IT   ++     E  +DEA  L++    RG   D  +Y T+I G  ++  
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            +RA ++   ++ +   P   +YN ++  L   GK E+   ++ ++      P+  T++ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I   C +G++E+A+     M EK   PD  + + L++  CREG L+ A++F  + I  G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D V YNT++++LCK  + + A  +  ++ E    P+  +Y  + +AL  SG    A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                M+  G                 IDP  I+Y+  I+  C +G   +A ++  + R 
Sbjct: 459 HMILEMMSNG-----------------IDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
                +  TY  ++ G  K  +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHR 523



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 53/368 (14%)

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           +C++GN  E+  +++ M RKG   + I    ++      + + +A  ++    K G   D
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-D 157

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y  LI G+ +  + + A ++ D M+ +   P T TYN MI  L   GK + A+ +LN
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           +LL     P   T+  +I     EG V++AL+  ++M+ +  KPD+ T N ++ G+C+EG
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 375 ILEKALKFFRSWILKGKAVDSVTYN----------------------------------- 399
           ++++A +  R+  LKG   D ++YN                                   
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI++LC++ ++E+A  LL  M+EK L PD Y+Y  +  A    GRL+ A +F   M+  
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G +                 P  ++Y+  +   C  G+   AL+IF +  + G + N S+
Sbjct: 398 GCL-----------------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440

Query: 520 YMNLMNGL 527
           Y  + + L
Sbjct: 441 YNTMFSAL 448



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 150/304 (49%), Gaps = 18/304 (5%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           I H  C      E+  LL +  ++GY  D +    LI G+F      +A+++  E+ E+ 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P  F YNA+I G  +  + + A  +L+ +      PD  T+N +I   CS G+++ AL
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  N+++  + +P ++T  IL+     EG +++ALK     + +G   D  TYNT+I  +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CKE  ++ AF ++  +E K   PD  +Y  +  AL+  G+ EE +K  + M         
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS------- 326

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                     E+ DP+ ++YS  I   C  G+ ++A+ + +  ++KG+  +  +Y  L+ 
Sbjct: 327 ----------EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 526 GLIK 529
              +
Sbjct: 377 AFCR 380



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 18/205 (8%)

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           +T    I H  C  G   ++L     MV K + PD++ C  L+ G      + KA++   
Sbjct: 89  DTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G+  D   YN LI+  CK  R++DA  +L  M  K   PD  TY  +  +L   G
Sbjct: 149 ILEKFGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +L+ A           K+ +Q++  N         P+ I+Y+  I     +G   +AL++
Sbjct: 208 KLDLAL----------KVLNQLLSDNCQ-------PTVITYTILIEATMLEGGVDEALKL 250

Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
            +E   +G+  +  TY  ++ G+ K
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCK 275


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 239/453 (52%), Gaps = 1/453 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD   +N ++    +   + + R++   M + G  P+  +Y+IL+ G  K+G 
Sbjct: 36  MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E+++++  M      P +  Y+ L+     A  ++ A  L  EM      PD + +  
Sbjct: 96  LDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYE 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++G+  +A +   ++ +HG +PN   +N+++   C  G++++A  +   M+ + 
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VTYNTL+DA CKA  +EE  ++ + M   G   N IT +T++H LC   +L++A 
Sbjct: 216 CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 275

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S  + G   ++ +Y TLI+G  R EK  +A +L+++M +  I P    YN++I G 
Sbjct: 276 EVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 335

Query: 301 SQSGKTEQAIDMLNELLQ-SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + G  ++A  +  E+   +G+ P   TFNT+I GFC  G++ +A +   +M  K    D
Sbjct: 336 CKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAAD 395

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T  IL++GL R   L++AL+ ++    K   +D V+  + +  LCK   ++ A+ +  
Sbjct: 396 SCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 455

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
              +    P+  T+  +  +L++ GR+E+AQK 
Sbjct: 456 ATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 215/420 (51%), Gaps = 1/420 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PDNV+Y+ ++  L K GKL+E   +LS+M  +G  P+   Y+ LV    K   +  A  +
Sbjct: 78  PDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSL 137

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M +    PD   +  LI G C AG +++A    K+M      P+V  YN L++    
Sbjct: 138 FDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCS 197

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG+  +A  L  E+  H   P+ VT+N ++   CK  ++++ CK+   M   G+ P+ +T
Sbjct: 198 SGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVIT 257

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++TLI   C+ G +E+A  +   M   G K N  T  T++  LC  +K+ +A  L    +
Sbjct: 258 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMT 317

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWGLSQSGKT 306
           +     D V+Y +LI GY +    + A KL+ EM     + P+  T+N +I G  + GK 
Sbjct: 318 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A +++ E+   G+  D  T+  +I G     ++++AL+ + +M EK F  D V+C   
Sbjct: 378 GRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLC+ G +++A   F +    G   +  T+  L  SL K  R+EDA  L+   + + +
Sbjct: 438 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 250/503 (49%), Gaps = 18/503 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY++I+ +L K+ K  E   +L +M   G  P+   +N ++ G+ +   +++A  V   M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            ++   PD  +Y++LI+G    G L+E+ ++  EM      P +  Y++L+    ++ R 
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L DE+   G  P+ +    +I   C+ GK+  A +  + M ++G  P+   YN L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +   C +G +E+A  +   M       + +T NT+L  +C  ++++E   L  +    GY
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + +++ TLI G  R  +  +AL+++  M E    P+ +TY  +I GL ++ K  QA +
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGL 370
           +  ++ Q+ + PD   +N++I G+C  G +++A + + +M   +  +P IVT N L+ G 
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G L +A +       KG A DS TY  LI+ L +  +L++A  +  +M EKK   D 
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            +  +    L ++G +++A        ++G +      PN    PE     S S  +   
Sbjct: 432 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV------PN----PETFRILSESLIK--- 478

Query: 491 EHCSQGRYKDALQIFEETRQKGI 513
                GR +DA ++ E  + + I
Sbjct: 479 ----LGRVEDAQKLMEPAKARDI 497



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 241/497 (48%), Gaps = 22/497 (4%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M+ + +  N  TY+ ++    K    +E+ +V++ M      PDV+ +N ++ G+  +  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           +E+A  + + M      PD V+Y+ LI+   + G+  E+ K++ E+   G  P+   ++ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +++   K  ++D A  +   M   G  PD + +  LI   C+AG +++A      M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + N    N +LH LC   +L++A  L           D V+Y TL+    +  +     
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           KL++ M+    +P+  T++ +I GL ++G+ E+A+++   +L++G  P++ T+ T+I G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   +V +A +   KM +    PD V  N L++G C+ G +++A K +R  +  G  +  
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE-MSGGAGLQP 359

Query: 396 --VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
             VT+NTLI   CK  +L  A  L++EM  K L  D  TY  +   L  + +L+EA +  
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVY 419

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDP-SSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             M E   +               +DP S +S+   +   C  G    A  +FE TR+ G
Sbjct: 420 KQMREKKFL---------------LDPVSCVSF---VGGLCKTGNIDQAYAVFEATRKSG 461

Query: 513 IAINKSTYMNLMNGLIK 529
              N  T+  L   LIK
Sbjct: 462 AVPNPETFRILSESLIK 478



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 213/427 (49%), Gaps = 16/427 (3%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M    +  +V TY+++I    +  +  E++K+++E+   G  P+    N +++ + +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           ++KA ++ ++M E+G+ PD V+Y+ LI    K G ++E+ +++  M  +G   +    ++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++  L   +++D A  L +   + G++ D + +  LI G  +  K   A + + +M +  
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P+   YN ++ GL  SG+ EQA  +  E+      PD  T+NT++   C   +VE+  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +    M    + P+++T + L+ GLCR G LEKAL+ F S +  G   +  TY TLIS L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C+  ++  A  L  +M +  + PD   Y ++     + G ++EA+K    M  +G    Q
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM--SGGAGLQ 358

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                         P+ ++++  I+  C  G+   A ++  E   KG+A +  TY  L+ 
Sbjct: 359 --------------PTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIA 404

Query: 526 GLIKRRK 532
           GL +  K
Sbjct: 405 GLSRATK 411



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 152/324 (46%), Gaps = 17/324 (5%)

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M  K +  N  T ++I+ +L  E K +E+Y +L      G   D  ++  ++ G+ R   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
             +A +++  M E    P   +Y+ +I GL++ GK ++++ +L+E++  G  P    +++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++       +V+ A    ++M+     PD +    L+ GLC+ G ++ A + F+     G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              +   YN L+  LC   +LE A  L +EM+     PD  TY  +  A+ ++ R+EE  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           K    M   G +                 P+ I++S  I+  C  G  + AL++F    +
Sbjct: 241 KLFEAMRAAGYV-----------------PNVITFSTLIHGLCRTGELEKALEVFGSMLE 283

Query: 511 KGIAINKSTYMNLMNGLIKRRKSI 534
            G   NK TY  L++GL +  K I
Sbjct: 284 AGCKPNKYTYTTLISGLCRAEKVI 307



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 70/137 (51%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  P  VT+NT++D   K GKL    +L+++M  +GL  +  TY IL++G  +   L 
Sbjct: 354 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLD 413

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA+ V   M + K L D  +    + G C  G +++A+ + +       +P+  T+  L 
Sbjct: 414 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILS 473

Query: 123 NRFFESGRSMEAFKLID 139
               + GR  +A KL++
Sbjct: 474 ESLIKLGRVEDAQKLME 490


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 237/457 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG   +  + N +++ L +   ++    +L  M K G+ P  +T+N L++G C  G 
Sbjct: 114 MDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGK 173

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA+ + + M +    P+V +YN +ING C  G    A  + K+ME     PDVVTYNT
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A + + E+ + GI PN  T+N M+  +C  G++++A ++ + M    
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT   L+D  CK G + EA  + + M  KG++ N  T N ++   C ++ ++EA 
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     ++G      SY  LI G+ +  + + A  L  EM  + + P T TY+ ++ GL
Sbjct: 354 KVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+ ++A+++  E+   G++P+  T++ ++ GFC  G +++AL+    M EK  +P+I
Sbjct: 414 CQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNI 473

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V   IL+ G+   G LE A + F      G      TY  +I  L KE   ++A+ L  +
Sbjct: 474 VHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRK 533

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           ME+    P+  +Y  +    +++     A +    MV
Sbjct: 534 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 570



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 254/518 (49%), Gaps = 17/518 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    +   L +  KK + + V  L + M   G+  N  + N+L++  C+L  +  A+ +
Sbjct: 86  PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +    P   T+N LING CN G ++EA  L  EM      P+V++YNT+IN   +
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G +  A  +  +++++G KP+ VT+N +I   CK+  ++ A + +  M + G  P+  T
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN ++   C  G + EA R+   M  + +  +T+TL  ++  LC E  + EA ++  + +
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   +  +Y  L+ GY      N A K+++ M  +   P   +YN +I G  +S + +
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L E+    + PD  T++T++ G C  G+ ++AL    +M      P++VT +ILL
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+ G L++ALK  +S   K    + V +  LI  +    +LE A  L S++    + 
Sbjct: 446 DGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIR 505

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P   TY  +   L++ G  +EA      M + G +                 P+S SY+ 
Sbjct: 506 PTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL-----------------PNSCSYNV 548

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            I           A+++ +E   K  + N ST+  L++
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 219/433 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   T+N +++ L  +GK+ E  +L ++M ++G  PN  +YN +++G CK G 
Sbjct: 149 MFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGN 208

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ V   M QN   PDV TYN +I+  C   ++ +A     EM    + P+V TYN 
Sbjct: 209 TSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNC 268

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ F   G+  EA +L  E+    + P+ VT  I++   CKEG + +A  +   M E G
Sbjct: 269 MVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKG 328

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN L+D  C    M EA ++ ++M R+G      + N +++  C  +++DEA 
Sbjct: 329 VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAK 388

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +    D V+Y TL+ G  +  +   AL ++ EM    ++P+  TY+ ++ G 
Sbjct: 389 SLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGF 448

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A+ +L  + +  + P+      +I G    G++E A +  +K+     +P I
Sbjct: 449 CKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTI 508

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  +++ GL +EG+ ++A   FR     G   +S +YN +I    + +    A  L+ E
Sbjct: 509 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 568

Query: 421 MEEKKLGPDRYTY 433
           M  K+   +  T+
Sbjct: 569 MVGKRFSANLSTF 581



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 202/381 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC PD VTYNTI+D+L K   +N+  + LS+M  +G+ PN  TYN +V G+C LG 
Sbjct: 219 MEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA R+   M     +PD  T  +L++G C  GM+ EA  + + M    + P++ TYN 
Sbjct: 279 LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNA 338

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +       EA K+ + +   G  P   ++NI+I  +CK  ++D+A  ++  M    
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY+TL+   C+ G  +EA  +   M   GL  N +T + +L   C    LDEA 
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S  ++    + V +  LI G F   K   A +L+ ++    I P+  TY  MI GL
Sbjct: 459 KLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G +++A D+  ++   G +P+  ++N +I GF        A++  ++MV K F  ++
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANL 578

Query: 361 VTCNILLSGLCREGILEKALK 381
            T  +LL    ++ I+ + ++
Sbjct: 579 STFQMLLDLESQDEIISQFMR 599



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 200/416 (48%), Gaps = 17/416 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P V  +   +  F +  +      L +++D  G+  N  + N++I   C+   +D A  I
Sbjct: 86  PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  M + G  P   T+N LI+  C  G ++EA  + + M R+G + N I+ NTI++ LC 
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
                 A  +     + G   D V+Y T+I    +D   N A++   EM +R I P+ FT
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN M+ G    G+  +A  +  E++   ++PD  T   ++ G C EG V +A      M 
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           EK  +P+I T N L+ G C + ++ +A K F   I +G A    +YN LI+  CK RR++
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  LL+EM  K L PD  TY+ +   L + GR +EA      M   G +          
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLL---------- 435

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  P+ ++YS  ++  C  G   +AL++ +  ++K +  N   +  L+ G+ 
Sbjct: 436 -------PNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 216/459 (47%), Gaps = 17/459 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    P V  +   +  +           L  +M+   +  +V + N LIN       
Sbjct: 79  MVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNH 138

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  ++ ++ + GI P A T N +I   C EGKI +A ++   M   G  P+ ++YNT
Sbjct: 139 VDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNT 198

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +I+  CK GN   A  +   M + G K + +T NTI+ +LC ++ +++A   L+    RG
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG 258

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  +Y  ++ G+    + N A +L+ EM  R +MP T T   ++ GL + G   +A 
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEAR 318

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +   + + G+ P+ +T+N ++ G+C +  + +A +    M+ +   P + + NIL++G 
Sbjct: 319 LVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGF 378

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   +++A         K    D+VTY+TL+  LC+  R ++A  +  EM    L P+ 
Sbjct: 379 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ +     + G L+EA K    M E                 ++++P+ + ++  I 
Sbjct: 439 VTYSILLDGFCKHGHLDEALKLLKSMQE-----------------KKLEPNIVHHTILIE 481

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                G+ + A ++F +    GI     TY  ++ GL+K
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 181/400 (45%), Gaps = 35/400 (8%)

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN--GFSPDCVTYNTLI 192
           F+++ +  E GI P++        ++        AC    ++ +N  GF  +  T  ++ 
Sbjct: 17  FRILQQHMEMGIFPSSFL------FFNHHHISTSACTRKPSLPQNNGGFVSNNSTNISID 70

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           DA      +   +RM+    R   + +       L +   +K+      L N     G  
Sbjct: 71  DA------LASFYRMV----RMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVT 120

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +  S   LI    R    + A+ +  +M +  I P+  T+NA+I GL   GK ++A+++
Sbjct: 121 HNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVEL 180

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            NE+++ G  P+  ++NTII+G C  G    A+    KM +   KPD+VT N ++  LC+
Sbjct: 181 FNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCK 240

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           + ++  A++F    + +G   +  TYN ++   C   +L +A  L  EM  + + PD  T
Sbjct: 241 DRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT 300

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
              +   L + G + EA+     M E G      V+PN S           +Y+  ++ +
Sbjct: 301 LTILVDGLCKEGMVSEARLVFETMTEKG------VEPNIS-----------TYNALMDGY 343

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           C Q    +A ++FE   ++G A    +Y  L+NG  K R+
Sbjct: 344 CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRR 383


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 256/540 (47%), Gaps = 77/540 (14%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  CLP+ V YNT++D  FK+G +N+  DL ++M ++G+ P+ +TYN +V+  CK   + 
Sbjct: 209 GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMD 268

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A  ++  M     LPD WTYN LI G+ + G  +EA R+ K+M S  +LPDVVT N+L+
Sbjct: 269 KAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLM 328

Query: 123 NRFFESGRSMEAFKLIDELD-----------------------------------EHGIK 147
               + G+  +A  + D +                                      GI 
Sbjct: 329 ASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIA 388

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF-- 205
           P++   N++IK Y K G +D+A  I   M E G  PD VTY+T+I A C+ G M++A   
Sbjct: 389 PDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEK 448

Query: 206 --RMMD-------------------------------VMGRKGLKMNTITLNTILHTLCC 232
             +M+D                                M  KG++ +    N I++ LC 
Sbjct: 449 FNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCK 508

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++ +A  + +     G + + + Y TL+ GY    K   AL+++D M    I P+   
Sbjct: 509 LGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVV 568

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKM 351
           Y  ++ G  + G+ ++ + +  E+L  G+ P  T +N I+HG    G+ V   ++FH +M
Sbjct: 569 YGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFH-EM 627

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            E     D  T +I+L GL +    ++A+  F+        +D  T N +I+ + + RR+
Sbjct: 628 TESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRV 687

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           E+A  L + +    L P   TY+ + T L++ G +EEA    S M   G       QPN+
Sbjct: 688 EEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG-----CEQPNS 742



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 259/535 (48%), Gaps = 22/535 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY  ++D   +  +          + K GL  +    + L+ G C+     EA+ +
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCN---AGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +   M     +PDV++Y +++   C+   +G  +E  R+  E  ++  LP+ V YNT+I+
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAV-CLPNAVAYNTVID 224

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G   +A  L +E+ + GI P+  T+N ++   CK   +DKA  I+R M + G  P
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN+LI      G  +EA R+   M  +G+  + +TLN+++ +LC   K+ +A  + 
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVF 344

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S + +G   D  SY  ++ GY          +L++ M    I P +  +N +I   ++ 
Sbjct: 345 DSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKC 404

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A  + NE+ + G+ PD  T++T+I   C  G+++ A++  N+M+++   P I T 
Sbjct: 405 GMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTY 464

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + L+ G C  G L KA       + KG   D   +N +I++LCK  R+ DA  +      
Sbjct: 465 HFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTIS 524

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             L P+   Y  +       G++E A +   +MV  G      +QPN            +
Sbjct: 525 IGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG------IQPNV-----------V 567

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            Y   +N +C  GR  + L +F E   KGI  + + Y  +++GL +  +++   V
Sbjct: 568 VYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKV 622



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 221/422 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD VT N+++ +L K GK+ + RD+   M  +G   +  +Y I+++GY   G 
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC 371

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +   + +LM  +   PD   +N+LI  +   GML+ A  +  EM    + PDVVTY+T
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I      G+  +A +  +++ + G+ P+  T++ +I+ +C  G + KA  +V  M   G
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   +N +I+  CK G + +A  + D     GL  N +  NT++   C   K++ A 
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENAL 551

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +     G   + V YGTL+ GY +  + +  L L+ E+  + I PST  YN ++ GL
Sbjct: 552 RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G+T  A    +E+ +SG+  D  T++ ++ G       ++A+    ++   + K DI
Sbjct: 612 FQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDI 671

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI+++G+ +   +E+A   F S    G     VTY+ ++++L KE  +E+A  + S 
Sbjct: 672 TTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSS 731

Query: 421 ME 422
           ME
Sbjct: 732 ME 733



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 183/408 (44%), Gaps = 58/408 (14%)

Query: 161 CKEGKIDKACKIVRNMEENG---FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           C++G         R    +G    SP   TY  L+D   +A   +        + + GL 
Sbjct: 81  CRDGPALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLG 140

Query: 218 MNTITLNTILHTLCCEKKLDEAY-MLLNSASKRGYYLD---------------------- 254
           ++TI ++ +L  LC  K+  EA  +LL+     G   D                      
Sbjct: 141 IDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADE 200

Query: 255 ---------------EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                           V+Y T+I G+F++   N+A  L++EM +R I P   TYN ++  
Sbjct: 201 LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNA 260

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++   ++A  +L +++  G++PD  T+N++I+G+ S GQ ++A++   KM  +   PD
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT N L++ LC+ G ++ A   F S  +KG+  D  +Y  +++    +  L D   L +
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M    + PD + +  +  A  + G L+ A    + M E G                 ++
Sbjct: 381 LMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQG-----------------VE 423

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           P  ++YS  I   C  G+  DA++ F +   +G+A + STY  L+ G 
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF 471



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 93/180 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V Y T+++   K G+++E   L  ++  +G+ P+ T YNI++ G  + G 
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A      MT++    D +TY++++ G       +EA  L KE+ ++ +  D+ T N 
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I   F+  R  EA  L   +   G+ P+ VT++IM+    KEG +++A  +  +ME  G
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG 736



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 39/245 (15%)

Query: 305 KTEQAIDMLNELL-QSGMIPDETTFNTIIHGF------------CSEGQVEKALQFHNKM 351
           + E+A D+ +ELL Q+  +P        ++GF            C +G    A+   N++
Sbjct: 42  RPEEAHDLFDELLHQATPVPGRQ-----LNGFLAALARAPASAACRDGPA-LAVALFNRV 95

Query: 352 VE----KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
                 +   P + T  IL+    R    +  L FF   +  G  +D++  + L+  LC+
Sbjct: 96  SRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCE 155

Query: 408 ERRLEDAFG-LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
            +R  +A   LL  M      PD ++Y  +  +L    +  +A +   +M E G +    
Sbjct: 156 AKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAV---- 211

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                        P++++Y+  I+    +G    A  +F E  Q+GI+ + STY  ++N 
Sbjct: 212 -----------CLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNA 260

Query: 527 LIKRR 531
           L K R
Sbjct: 261 LCKAR 265


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 234/455 (51%), Gaps = 1/455 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P   + N +L    + GK + ++    DM   G  P   TYNI++   CK G ++ A  
Sbjct: 95  FPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASG 154

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M     +PD  TYN +I+G+   G L++     +EM+S+   PDV+TYNTLIN F 
Sbjct: 155 LFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFC 214

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G+  +  +   E+ + G+KPN V+++ ++  +CKE  + +A K   +M   G  P+  
Sbjct: 215 KFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEH 274

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +L+DA CK GN+ +AFR+ D M + G++ N +T   ++  LC  +++ EA  L    
Sbjct: 275 TYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKM 334

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   +  SY  LI G+ + +  +RAL+L DEMK R I P    Y   IW L    K 
Sbjct: 335 VTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKI 394

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A  ++NE+ + G+  +   + T++  +       + L    +M+E   +   VT  +L
Sbjct: 395 EAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVL 454

Query: 367 LSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           + GLC+  ++ KA+ +F R     G   ++  Y  +I  LCKE ++E A  L  +M +K 
Sbjct: 455 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKG 514

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L PDR  Y ++    ++ G + +A      M E G
Sbjct: 515 LVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIG 549



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 201/424 (47%), Gaps = 1/424 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   TYN ++D + K+G +     L  +MK +GL+P+  TYN ++ GY K+G 
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L + +   + M      PDV TYN LIN +C  G L +     +EM+   L P+VV+Y+T
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +     +A K   ++   G+ PN  T+  ++  YCK G +  A ++   M + G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + VTY  LID  C    ++EA  +   M   G+  N  +   ++H     K +D A 
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+    RG   D + YGT I      EK   A  + +EM+E+ I  +TF Y  ++   
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPD 359
            +S    + + +L E+L+  +     TF  +I G C    V KA+ +  ++      + +
Sbjct: 424 FKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQAN 483

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
                 ++ GLC+E  +E A   F     KG   D   Y +LI    K+  +  A  L  
Sbjct: 484 AAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRD 543

Query: 420 EMEE 423
           +M E
Sbjct: 544 KMAE 547



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 228/485 (47%), Gaps = 21/485 (4%)

Query: 67  VVDLM--TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           V D++  T+N  +P    ++ L +      M EEA +   +M+  ++ P   + N L+++
Sbjct: 48  VFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHK 107

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G++    +   ++   G KP   T+NIMI   CKEG I+ A  +   M+  G  PD
Sbjct: 108 FARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPD 167

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN++ID   K G +++     + M     + + IT NT+++  C   KL +      
Sbjct: 168 TVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFR 227

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + VSY TL+  + +++   +ALK + +M+   ++P+  TY +++    + G
Sbjct: 228 EMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIG 287

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A  + +E+ Q G+  +  T+  +I G C   ++++A +   KMV     P++ +  
Sbjct: 288 NLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYT 347

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  +   +++AL+       +G   D + Y T I SLC   ++E A  +++EM+EK
Sbjct: 348 ALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEK 407

Query: 425 KLGPDRYTYAAIHTALVES--------------GRLEEAQKFTSIMVETGKINHQVVQPN 470
            +  + + Y  +  A  +S                  E    T  ++  G   +++V   
Sbjct: 408 GIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKA 467

Query: 471 TS-----KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       +  ++  Y+  I+  C + + + A  +FE+  QKG+  +++ Y +L++
Sbjct: 468 IDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLID 527

Query: 526 GLIKR 530
           G +K+
Sbjct: 528 GKLKQ 532



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 17/310 (5%)

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
             + +   L  E   +EA    +   +   +    S   L+  + R  K +   + + +M
Sbjct: 65  VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
                 P+ FTYN MI  + + G  E A  +  E+   G+IPD  T+N++I G+   G++
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           +  + F  +M   S +PD++T N L++  C+ G L K L+FFR     G   + V+Y+TL
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           + + CKE  ++ A     +M    L P+ +TY ++  A  + G L +A +    M + G 
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG- 303

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                           ++ + ++Y+  I+  C   R K+A ++F +    G+  N ++Y 
Sbjct: 304 ----------------VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYT 347

Query: 522 NLMNGLIKRR 531
            L++G +K +
Sbjct: 348 ALIHGFVKAK 357



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 40/256 (15%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY  ++D L    ++ E  +L   M   G++PN  +Y  L+ G+ K   +  A+ ++D 
Sbjct: 309 VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      PD+  Y   I   C    +E A  +  EM+   +  +   Y TL++ +F+S  
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428

Query: 131 -------------------SMEAFKLIDEL-----------------DEHGIKPNAVTHN 154
                              ++    LID L                 ++ G++ NA  + 
Sbjct: 429 PSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYT 488

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG-- 212
            MI   CKE +++ A  +   M + G  PD   Y +LID   K GN+ +A  + D M   
Sbjct: 489 AMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEI 548

Query: 213 --RKGLKMNTITLNTI 226
               G +   +  NTI
Sbjct: 549 GVESGARFGDLCQNTI 564


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 271/557 (48%), Gaps = 36/557 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN  LDAL K        +    M+++G  P+  TY+I++ G CK G L +A  ++  +
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINRFFESGR 130
            ++    +V TY+++I+G C A  +++A  + K M S    +PDVVT+N+L+       R
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGER 159

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EAF L + + + G +PN ++++ ++   CK G++D+AC++   M E    PD V Y +
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
            +   CKA  + EA      M  KG K + +  +T++  LC +   +EA   +     R 
Sbjct: 220 FVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRS 279

Query: 251 YYLDEVS-----------------YGTLITGYFRDEKANRALKLWD---EMKERQIMPST 290
             LDE                   + TLI    + ++    + L+     MKE    P+ 
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TYN M+  L ++ + ++A +++NE+   G+ PD  T++ ++ G C  G++++A     +
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M ++   PD  T   +L+ L + G ++ AL    +   +G   D VTYNTL+  LCK  R
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGR 459

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN-----HQ 465
           +++A   L++M   K  PD ++Y  I TAL  SG+   A      MV+ G +      H 
Sbjct: 460 IDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHS 519

Query: 466 VVQPNTSKTPEEI----------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           ++        E++           P  + +   ++  C  G+ +DA ++ E     G   
Sbjct: 520 LLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPA 579

Query: 516 NKSTYMNLMNGLIKRRK 532
           +  TY+++++GL K  K
Sbjct: 580 DAFTYISVVSGLRKLGK 596



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 231/492 (46%), Gaps = 53/492 (10%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+PD VT+N++L  L    +++E   L   M K G  PN  +Y+ L+ G CK G L 
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA R+ + M +   +PD+  Y   + G C A  + EA    ++M +     D V ++T+I
Sbjct: 197 EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
               + G + EA                   N MI+  C+ G +D+ACK    M      
Sbjct: 257 GILCKKGHAEEA------------------QNQMIEHLCRSGMLDEACKTFEEMISRNHP 298

Query: 183 PDCVTYNTLIDANCKAGNMEEA---FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           P    +NTLI A CK+  + +    F+ M  M       N  T N ++  LC  K+LDEA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L+N  +  G   D V+Y  L+ G  +  K +RA  L +EM +  + P +FT  +++  
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS++GK + A+  L  +   G  PD  T+NT++ G C  G++++A+ F  KMV     PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL------------------ 401
           + +  I+++ LCR G    A   F+  + +G   D+V Y++L                  
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538

Query: 402 --------------ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
                         +  LCK  + EDA  ++  M +     D +TY ++ + L + G+++
Sbjct: 539 TSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVD 598

Query: 448 EAQKFTSIMVET 459
           +A++      ET
Sbjct: 599 KARQLVDDASET 610



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 220/452 (48%), Gaps = 23/452 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ ++Y+T+LD L K G+L+E   L  +M ++  VP+   Y   V+G CK   
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229

Query: 61  LKEAMRVVDLMTQNKSLPDVWTY-----------------NMLINGWCNAGMLEEAFRLR 103
           + EA      M    S  D   +                 N +I   C +GML+EA +  
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEA---FKLIDELDEHGIKPNAVTHNIMIKWY 160
           +EM S    P    +NTLI+   +S R  +    F+ +  + E    PN  T+NIM+   
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK  ++D+A ++V  M   G SPD VTY+ L+D  CK G ++ A  +++ M ++G+  ++
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T  +IL+ L    K+D A   L +   RG   D V+Y TL+ G  +  + + A+    +
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M   +  P  F+Y  +I  L +SG+   A  +  E+++ G++PD   +++++ G    G 
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL 529

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
            + AL+     +    KPD V   ++L GLC+ G  E A +        G   D+ TY +
Sbjct: 530 EDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYIS 586

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           ++S L K  +++ A  L+ +  E     +R +
Sbjct: 587 VVSGLRKLGKVDKARQLVDDASETHTSVERLS 618



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 241/515 (46%), Gaps = 46/515 (8%)

Query: 58  LGWLKEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           LG +   +R+ D + + K     V+TYN  ++    A   + A+   ++M+     PD  
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY+ ++    ++G   +A +L+ +L E G+K N +T++++I   CK  ++D A +I + M
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 177 EENGFS-PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
              G   PD VT+N+L+   C    M EAF + + M + G + N I+ +T+L  LC   +
Sbjct: 135 SSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           LDEA  L     ++    D V+Y + +TG  +  +   A     +M  +        ++ 
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254

Query: 296 MIWGLSQSGKTEQAID-MLNELLQSGMI----------------PDETTFNTIIHGFCSE 338
           +I  L + G  E+A + M+  L +SGM+                P    FNT+IH  C  
Sbjct: 255 VIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS 314

Query: 339 GQVEKALQFHNKMVEKSFK-----PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            ++   +    +M  KS K     P++ T NI++  LC+   L++A +        G + 
Sbjct: 315 KRLPDGVLLFQRM--KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D VTY+ L+  LCK  +L+ A  LL EM ++ + PD +T A+I  AL ++G+++ A    
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 454 SIMVETGKINHQVVQPNT--------SKTPEEI-----------DPSSISYSEKINEHCS 494
             M   G     +V  NT         +  E I            P   SY+  I   C 
Sbjct: 433 ETMKARGS-TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            G+   A  IF+E  ++G+  +   Y +L++GL +
Sbjct: 492 SGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR 526



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 208/422 (49%), Gaps = 39/422 (9%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TYN  ++   ++     A++   ++   G  P+  T++I+++  CK G++DKA +++ 
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCE 233
            + E+G   + +TY+ +ID  CKA  +++A  +   M    G   + +T N++L  LC  
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSG 157

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           +++ EA++L    +K G   + +SY TL+ G  +  + + A +LW+EM E+  +P    Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            + + GL ++ +  +A D   +++  G   D   F+T+I   C +G  E+A    N+M+E
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA---QNQMIE 274

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                           LCR G+L++A K F   I +     +  +NTLI ++CK +RL D
Sbjct: 275 H---------------LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPD 319

Query: 414 A---FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
               F  +  M+E    P+  TY  +   L ++ +L+EAQ+  + M   G          
Sbjct: 320 GVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG---------- 369

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  + P  ++YS  ++  C  G+   A  + EE  ++G+  +  T  +++N L K 
Sbjct: 370 -------LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 531 RK 532
            K
Sbjct: 423 GK 424



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 128/263 (48%), Gaps = 19/263 (7%)

Query: 270 KANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           K +  ++L+D + +++    S FTYN  +  L+++   + A +   ++ + G  PD+ T+
Sbjct: 17  KISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTY 76

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           + ++ G C  G+++KA +   ++ E   K +++T ++++ G C+   ++ AL+ F++   
Sbjct: 77  SIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSS 136

Query: 389 KGKAV-DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            G  V D VT+N+L+  LC   R+ +AF L   M +    P+  +Y+ +   L ++GRL+
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA +    MVE   +                 P  ++Y+  +   C   R  +A     +
Sbjct: 197 EACRLWEEMVEKSCV-----------------PDLVAYTSFVTGLCKANRVAEACDCCRK 239

Query: 508 TRQKGIAINKSTYMNLMNGLIKR 530
              KG   +   +  ++  L K+
Sbjct: 240 MVTKGSKADAVAFSTVIGILCKK 262


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 258/524 (49%), Gaps = 18/524 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V   T++D LFK GK  E  ++   + K  LVPN  TY  L+ G+CK+G ++ A  V+
Sbjct: 340 DLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVL 399

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M +   LP+V T++ +ING+   GML +A  + ++M  + ++P+V  Y  L++ +F +
Sbjct: 400 QKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRT 459

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+   A     E+   G++ N +  +I++    + G + +A  +++++   G   D   Y
Sbjct: 460 GQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNY 519

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           ++L+D   K GN   A  ++  M  K ++ + +  N +   L    K  E   + +   +
Sbjct: 520 SSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIE 578

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+Y +++  YF   K   AL L +EMK   +MP+  TYN +I GL ++G  E+
Sbjct: 579 LGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEK 638

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            I +L+E+L  G +P       ++  +    + +  LQ H K+V+     + +  N L++
Sbjct: 639 VISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLIT 698

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LCR G+ +KA       ++KG + D VTYN LI   C    +E AF   S+M    + P
Sbjct: 699 VLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISP 758

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY A+   L  +G + +A K  S M E G +                 P++ +Y+  
Sbjct: 759 NITTYNALLEGLSTNGLMRDADKLVSEMRERGLV-----------------PNATTYNIL 801

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++ H   G  +D+++++ E   KG      TY  L+    K  K
Sbjct: 802 VSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGK 845



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/577 (27%), Positives = 272/577 (47%), Gaps = 74/577 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D+VTYNT++    K+G  ++   LLS+M K+G+  +  T NILV GYC++G ++ A  ++
Sbjct: 74  DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIM 133

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             +       D    N L++G+C  G++  A  L ++     + PD+VTYNTL+N F + 
Sbjct: 134 GNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKR 193

Query: 129 GRSMEAFKLIDEL------DEHGI---------------KPNAVTHNIMIKWYCKEGKID 167
           G   +A  +++E+      DE G+               +P  VT   +I  YCK   ID
Sbjct: 194 GDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGID 253

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
               +   M  +G  PD VT ++++   C+ G + EA  ++  M   GL  N ++  TI+
Sbjct: 254 DFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTII 313

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L    ++ EA+   +    RG  +D V   T++ G F+  K+  A +++  + +  ++
Sbjct: 314 SALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLV 373

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+  TY A++ G  + G  E A  +L ++ +  ++P+  TF++II+G+  +G + KA++ 
Sbjct: 374 PNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEV 433

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF---RSWIL---------------- 388
             KMV+ +  P++    ILL G  R G  E A  F+   +SW L                
Sbjct: 434 LRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKR 493

Query: 389 ----------------KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
                           KG  +D   Y++L+    KE     A  ++ EM EK +  D   
Sbjct: 494 SGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVA 553

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y A+   L+  G+ E    F S M+E G                 + P  ++Y+  +N +
Sbjct: 554 YNALTKGLLRLGKYEPKSVF-SRMIELG-----------------LTPDCVTYNSVMNTY 595

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             QG+ ++AL +  E +  G+  N  TY  L+ GL K
Sbjct: 596 FIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCK 632



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 249/523 (47%), Gaps = 18/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VT ++IL  L + GKL E   LL +M   GL PN  +Y  ++S   K G + EA
Sbjct: 266 GVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEA 325

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
                 M       D+     +++G   AG  +EA  + + +  L L+P+ VTY  L++ 
Sbjct: 326 FNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDG 385

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A  ++ ++++  + PN VT + +I  Y K+G ++KA +++R M +    P+
Sbjct: 386 HCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPN 445

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  L+D   + G  E A      M   GL+ N I  + +L+ L     + EA  L+ 
Sbjct: 446 VFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIK 505

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G YLD  +Y +L+ GYF++   + AL +  EM E+ +      YNA+  GL + G
Sbjct: 506 DILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLG 565

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E    + + +++ G+ PD  T+N++++ +  +G+ E AL   N+M      P++VT N
Sbjct: 566 KYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYN 624

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ GLC+ G +EK +      +  G     + +  L+ +  + R+ +    +  ++ + 
Sbjct: 625 ILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDM 684

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L  ++  Y  + T L   G  ++A    + MV  G                 I    ++
Sbjct: 685 GLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG-----------------ISADIVT 727

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I  +C+    + A   + +    GI+ N +TY  L+ GL
Sbjct: 728 YNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGL 770



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 234/469 (49%), Gaps = 13/469 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ +G   +N+ ++ +L+ L + G + E + L+ D+  +G+  +   Y+ L+ GY K G 
Sbjct: 472 MKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGN 531

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ VV  MT+     DV  YN L  G    G  E      + +E L L PD VTYN+
Sbjct: 532 ESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIE-LGLTPDCVTYNS 590

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N +F  G++  A  L++E+  +G+ PN VT+NI+I   CK G I+K   ++  M   G
Sbjct: 591 VMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P  + +  L+ A  ++   +   ++   +   GL +N +  NT++  LC      +A 
Sbjct: 651 YVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKAN 710

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++L     +G   D V+Y  LI GY       +A   + +M    I P+  TYNA++ GL
Sbjct: 711 VVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGL 770

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S +G    A  +++E+ + G++P+ TT+N ++ G    G    +++ + +M+ K F P  
Sbjct: 771 STNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTT 830

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK-------ERRLE- 412
            T N+L+    + G + +A +     + +G+  +S TY+ LI   CK       +R L+ 
Sbjct: 831 GTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKL 890

Query: 413 ----DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
               +A  LL EM EK   P   T   I +     G+ ++A++    ++
Sbjct: 891 SYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTVI 939



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 239/500 (47%), Gaps = 40/500 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ VTY  +LD   K G +     +L  M+K+ ++PN  T++ +++GY K G L +A+ 
Sbjct: 373 VPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVE 432

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M Q   +P+V+ Y +L++G+   G  E A    KEM+S  L  + + ++ L+N   
Sbjct: 433 VLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLK 492

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN------- 179
            SG   EA  LI ++   GI  +   ++ ++  Y KEG    A  +V+ M E        
Sbjct: 493 RSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVV 552

Query: 180 ---------------------------GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                      G +PDCVTYN++++     G  E A  +++ M 
Sbjct: 553 AYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMK 612

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             G+  N +T N ++  LC    +++   +L+     GY    + +  L+  Y R  KA+
Sbjct: 613 SYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKAD 672

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             L++  ++ +  +  +   YN +I  L + G T++A  +L E++  G+  D  T+N +I
Sbjct: 673 AILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALI 732

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G+C+   VEKA   +++M+     P+I T N LL GL   G++  A K       +G  
Sbjct: 733 RGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLV 792

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            ++ TYN L+S   +     D+  L  EM  K   P   TY  +     ++G++ +A++ 
Sbjct: 793 PNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQAREL 852

Query: 453 TSIMVETGKINHQVVQPNTS 472
            + M+  G+I      PN+S
Sbjct: 853 LNEMLTRGRI------PNSS 866



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 269/561 (47%), Gaps = 40/561 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKL-------NEV----RD----LLSDMKKQ------GLVP 43
           G  PD VTYNT+++A  K+G L       NE+    RD    +L+D   +       L P
Sbjct: 175 GVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQP 234

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
              T+  L++ YCK   + +   + + M  +  +PDV T + ++ G C  G L EA  L 
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           +EM ++ L P+ V+Y T+I+   +SGR MEAF    ++   GI  + V    M+    K 
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKA 354

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           GK  +A ++ + + +    P+CVTY  L+D +CK G++E A  ++  M ++ +  N +T 
Sbjct: 355 GKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTF 414

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           ++I++    +  L++A  +L    +     +   Y  L+ GYFR  +   A   + EMK 
Sbjct: 415 SSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKS 474

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
             +  +   ++ ++  L +SG  ++A  ++ ++L  G+  D   +++++ G+  EG    
Sbjct: 475 WGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESA 534

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL    +M EK  + D+V  N L  GL R G  E    F R  I  G   D VTYN++++
Sbjct: 535 ALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSR-MIELGLTPDCVTYNSVMN 593

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           +   + + E+A  LL+EM+   + P+  TY  +   L ++G +E+       M+  G + 
Sbjct: 594 TYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVP 653

Query: 464 HQVVQP------NTSKTPEEI------------DPSSISYSEKINEHCSQGRYKDALQIF 505
             ++        + S+  + I            + + + Y+  I   C  G  K A  + 
Sbjct: 654 TPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVL 713

Query: 506 EETRQKGIAINKSTYMNLMNG 526
            E   KGI+ +  TY  L+ G
Sbjct: 714 TEMVIKGISADIVTYNALIRG 734



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 258/542 (47%), Gaps = 47/542 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M     +P    +N +L      G +++V+ L S+M   G+VPN  + N+LV   CK+G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+  +       S+ D  TYN ++ G+C  G+ ++ F L  EM    +  D VT N 
Sbjct: 61  LGLALGYL-----RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  + + G    A  ++  L   G+  +A+  N ++  YC+ G + +A  +V +  +NG
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTL++A CK G++ +A                    ++++ +   ++ DE+ 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKA-------------------ESVVNEILGFRRDDESG 216

Query: 241 MLLNSASK-----RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +L +   +     R      V++ TLI  Y +    +    L+++M    +MP   T ++
Sbjct: 217 VLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSS 276

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +++GL + GK  +A  +L E+   G+ P+  ++ TII      G+V +A    ++MV + 
Sbjct: 277 ILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRG 336

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
              D+V C  ++ GL + G  ++A + F++ +      + VTY  L+   CK   +E A 
Sbjct: 337 ISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAE 396

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            +L +ME++ + P+  T+++I     + G L +A +    MV+                 
Sbjct: 397 TVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQM---------------- 440

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             I P+   Y+  ++ +   G+++ A   ++E +  G+  N   +  L+N L KR   + 
Sbjct: 441 -NIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNL-KRSGGMK 498

Query: 536 KA 537
           +A
Sbjct: 499 EA 500



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 217/456 (47%), Gaps = 46/456 (10%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M +L L+P +  +N L+  F  SG   +   L  E+   G+ PN  + N+++   CK G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +  A   +RN        D VTYNT++   CK G  ++ F ++  M +KG+  +++T N 
Sbjct: 61  LGLALGYLRNS-----VFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++   C    +  A  ++ +    G  LD +   TL+ GY      +RAL L ++  +  
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL------QSGMI---------------PD 324
           + P   TYN ++    + G   +A  ++NE+L      +SG++               P 
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+ T+I  +C    ++     + +M+     PD+VTC+ +L GLCR G L +A    R
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G   + V+Y T+IS+L K  R+ +AF   S+M  + +  D      +   L ++G
Sbjct: 296 EMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAG 355

Query: 445 RLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           + +EA++ F +I+    K+N              + P+ ++Y+  ++ HC  G  + A  
Sbjct: 356 KSKEAEEMFQTIL----KLN--------------LVPNCVTYTALLDGHCKVGDVEFAET 397

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           + ++  ++ +  N  T+ +++NG  K +  ++KAV+
Sbjct: 398 VLQKMEKEHVLPNVVTFSSIINGYAK-KGMLNKAVE 432


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 254/494 (51%), Gaps = 17/494 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C PD  +YN +++A   KG+ +    LL+ M + G  P+  T+  ++  +CK G 
Sbjct: 283 MGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGN 342

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A +  D +       +   YN++I+G+  A  + +A  L +EM +  ++PD +T+NT
Sbjct: 343 VELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 402

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+   +  G+  +  +L+ +L   G+  ++   ++ +   C  G+ D+A K++ N+ E G
Sbjct: 403 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKG 462

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V +N++I A   AG  E AF    +M + GL  ++ T +++L +L  +  LDEA+
Sbjct: 463 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAW 522

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           + L     +G+ +  +++  L+ GYFR    N A  LW+EMK R + P    + A I GL
Sbjct: 523 IALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGL 582

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG    A D+ +++L+ G +P+   +N++I GFC  G++ +AL+   +M ++   PDI
Sbjct: 583 CISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDI 642

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++ GLC++G ++ A++ F      G + D VTYNTLI   CK   +  A  L+ +
Sbjct: 643 FTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMK 702

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +    PD  TY           ++  A      ++  G                 I P
Sbjct: 703 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG-----------------IVP 745

Query: 481 SSISYSEKINEHCS 494
           ++++Y+  IN  C+
Sbjct: 746 NTVTYNTMINAVCN 759



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 249/573 (43%), Gaps = 55/573 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D    +T++ A  K     E  ++LS M++ G+ PN +  +IL     + G      ++ 
Sbjct: 186 DFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 245

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             + +    P+ +T+N+LI  +C  G       L   M   +  PDV +YN +IN     
Sbjct: 246 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLK 305

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+S  A  L++ + E+G KP+  T   +I  +CKEG ++ A K    +E+ G S + + Y
Sbjct: 306 GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVY 365

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT----------------------- 225
           N +I    KA ++ +A  + + M  K +  + IT NT                       
Sbjct: 366 NIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSV 425

Query: 226 --ILHT----------LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
             +LH           LC   + DEA  LL +  ++G     V++ ++I  Y       R
Sbjct: 426 SGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEER 485

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A   +  M +  + PS+ T ++++  L + G  ++A   L +++  G       F  ++ 
Sbjct: 486 AFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLD 545

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G+   G V  A    N+M  +   PD V     ++GLC  G++  A   F   + KG   
Sbjct: 546 GYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVP 605

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           ++  YN+LI   CK  +L +A  L+ EM ++ L PD +T   I   L + GR++ A +  
Sbjct: 606 NNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETF 665

Query: 454 SIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKINEHCS 494
             M   G ++  +V  NT                     +    +P   +Y+ +I+ +C+
Sbjct: 666 MDMCRMG-LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCT 724

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             +   A+ I EE    GI  N  TY  ++N +
Sbjct: 725 VRKINRAVMILEELISVGIVPNTVTYNTMINAV 757



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 193/409 (47%), Gaps = 36/409 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD +T+NT++   ++ GK  +   LL D+   GL+ + +  ++ V+G C  G   EAM+
Sbjct: 394 VPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMK 453

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT--------- 117
           +++ + +    P V  +N +I  + NAG+ E AF     M    L P   T         
Sbjct: 454 LLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLV 513

Query: 118 --------------------------YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                     +  L++ +F  G    A  L +E+   G+ P+AV
Sbjct: 514 RKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAV 573

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                I   C  G +  A  +  +M   GF P+   YN+LI   CK G + EA +++  M
Sbjct: 574 AFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREM 633

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            ++GL  +  T+N I+  LC + ++  A        + G   D V+Y TLI GY +    
Sbjct: 634 NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDV 693

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A  L  +M +    P   TYN  I G     K  +A+ +L EL+  G++P+  T+NT+
Sbjct: 694 GGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTM 753

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           I+  C+   ++ A+    K+++ +F P+ VT N+LLS  C++G+ EKA+
Sbjct: 754 INAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 801



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 169/327 (51%), Gaps = 1/327 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  P + T +++L +L +KG L+E    L DM  +G       + +L+ GY ++G 
Sbjct: 493 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 552

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + + M      PD   +   ING C +G++ +A+ +  +M     +P+   YN+
Sbjct: 553 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 612

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + G+  EA KL+ E+++ G+ P+  T N++I   CK+G++  A +   +M   G
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VTYNTLID  CKA ++  A  +M  M   G + +  T N  +H  C  +K++ A 
Sbjct: 673 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 732

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           M+L      G   + V+Y T+I     +   + A+ L  ++ +   +P+T T N ++   
Sbjct: 733 MILEELISVGIVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQF 791

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETT 327
            + G  E+AI    +L +  +  DETT
Sbjct: 792 CKQGMPEKAIFWGQKLSEIHLDFDETT 818



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 202/454 (44%), Gaps = 17/454 (3%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D    + L+  +  + M  EA  +  +M  + + P+    + L      +G     +KL 
Sbjct: 186 DFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 245

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++   G  PN  T N++I  +C++G       ++  M +    PD  +YN +I+ANC  
Sbjct: 246 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLK 305

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G    A  ++++M   G K +  T  TI+   C E  ++ A    +     G   + + Y
Sbjct: 306 GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVY 365

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             +I+GY +    ++A  L++EM+ + I+P   T+N ++ G  + GK E    +L +L  
Sbjct: 366 NIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSV 425

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           SG++ D +  +  + G C  G+ ++A++    ++EK   P +V  N +++     G+ E+
Sbjct: 426 SGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEER 485

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A   +   +  G    S T ++L+ SL ++  L++A+  L +M +K        +  +  
Sbjct: 486 AFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLD 545

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
                G +  A+   + M   G                 + P +++++  IN  C  G  
Sbjct: 546 GYFRIGAVNMAESLWNEMKGRG-----------------VFPDAVAFAAFINGLCISGLM 588

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            DA  +F +  +KG   N   Y +L+ G  K  K
Sbjct: 589 TDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGK 622



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 171/350 (48%), Gaps = 3/350 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  V +N+I+ A    G           M K GL P+ +T + L+    + G L EA
Sbjct: 462 GIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEA 521

Query: 65  -MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            + + D++ +   + ++  + +L++G+   G +  A  L  EM+   + PD V +   IN
Sbjct: 522 WIALYDMIDKGFPVTNM-AFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFIN 580

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               SG   +A+ +  ++   G  PN   +N +I  +CK GK+++A K+VR M + G  P
Sbjct: 581 GLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLP 640

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T N +I   CK G M+ A      M R GL  + +T NT++   C    +  A  L+
Sbjct: 641 DIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLM 700

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S  G+  D  +Y   I GY    K NRA+ + +E+    I+P+T TYN MI  +   
Sbjct: 701 MKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV 760

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
              + A+ +  +LL+   +P+  T N ++  FC +G  EKA+ +  K+ E
Sbjct: 761 -ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSE 809



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 152/357 (42%), Gaps = 18/357 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D    +TL+ A  K+    EA  ++  M   G+  N   ++ +   L         +
Sbjct: 183 YESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVW 242

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++G   +  ++  LI  + R         L   M + +  P  ++YN +I   
Sbjct: 243 KLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINAN 302

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G++  A+ +LN ++++G  P   TF TII  FC EG VE A ++ +++ +     + 
Sbjct: 303 CLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNT 362

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  NI++SG  +   + +A   F     K    D +T+NTL++   +  + ED   LL +
Sbjct: 363 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 422

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +    L  D          L  +GR +EA K    ++E G                 I P
Sbjct: 423 LSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKG-----------------IPP 465

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           S ++++  I  + + G  + A   +    + G+  + ST  +L+  L+ R+ S+ +A
Sbjct: 466 SVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLV-RKGSLDEA 521



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYN  +       K+N    +L ++   G+VPN  TYN +++  C +  
Sbjct: 703 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-I 761

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  AM +   + +   +P+  T N+L++ +C  GM E+A    +++  + L  D  T+  
Sbjct: 762 LDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHK- 820

Query: 121 LINRFFES 128
           L+NR + +
Sbjct: 821 LMNRAYRA 828


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 224/421 (53%), Gaps = 1/421 (0%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M  + ++P   T+N +  G+ K G L++   V   M +         Y +LI+  C  G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
            +EA++L   M   +     + Y+T+IN   +  R  EA +LI+++  +   P+A+T+  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +++  CK  +ID A   V  M   G  PD   YN ++   C+   +EEA  + + M ++ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  N +T NT+++ LC   +++ AY L    + +GY   EVSY TLI G+ + +    A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            ++D+M     +P+  TY  +I GLS+SGK + A ++L+ +++ G+ P+  T++ +I GF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   +V++A +   +MV +   P +VT NILL+ LCR   LE A K FR    +      
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYNTL+ +LC  ++L+ A  L +EM  K   PD  TY  +   L  +G++ EAQ+    
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 456 M 456
           M
Sbjct: 420 M 420



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 217/422 (51%), Gaps = 1/422 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P   T+NT+ D   K G+L +V+++   M + G     + Y IL+S  CK+G   EA +
Sbjct: 7   IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M   +       Y+ +IN  C    +EEA  L ++M      PD +TY  ++ R  
Sbjct: 67  LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLC 125

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++ R  +A   ++E+   GIKP+A  +N ++   C+E K+++A  +   M +   +P+ V
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYNTLI+  CKA  +E A+ +   M  KG     ++ NT++   C +K L  A  + +  
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +     + V+Y TLI G  +  K   A ++ D M ++ + P+  TY+ +I G  +  + 
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  +L +++  G+ P   T+N +++  C   ++E A +    M ++   P +VT N L
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L  LC    L+ A + +   I KG   D++TY+TL   L +  ++ +A  L+ +M+  K 
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKR 425

Query: 427 GP 428
            P
Sbjct: 426 NP 427



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 201/390 (51%), Gaps = 1/390 (0%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M   + +P   T+N + +G+  AG LE+   + + M           Y  LI+   + G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA+KL+  +     K  A+ ++ +I W CK  ++++A +++  M      PD +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +++  CK   +++A   ++ M  +G+K +    N +L  LC E+K++EA +L     K+ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V+Y TLI G  +  +   A +L+ EM  +  +P+  +YN +I G  +      A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           D+ +++++S  +P+  T+ T+I G    G+V+ A +  + MV+K   P++ T + L+ G 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   +++A K     + +G A   VTYN L++SLC+  +LEDAF L   M +++  P  
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            TY  +  AL    +L+ A +  + M+  G
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 9/306 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD   YN +L  L ++ K+ E R L   M KQ + PN  TYN L++G CK   
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  +   M     +P   +YN LI+G+C    L  A  +  +M     +P+VVTY T
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +SG+   A +++D + + G+ PN  T++ +I  +CK  ++D+A K++  M   G
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTYN L+++ C+A  +E+AF++   M ++      +T NT+L  LC  K+LD A+
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 379

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +G   D ++Y TL  G  R  K + A +L ++MK  +  P         +G 
Sbjct: 380 RLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP---------FGR 430

Query: 301 SQSGKT 306
           S  GK 
Sbjct: 431 SSQGKA 436



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 187/387 (48%), Gaps = 18/387 (4%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P A T N +   + K G++++  ++ + M E G++     Y  LI   CK GN +EA+
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           +++  M  K  K   I  +TI++ LC   +++EA  L+   + R    D ++YG ++   
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERL 124

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            + ++ + AL   +EM  R I P  F YN ++ GL Q  K E+A  +  ++++  + P+ 
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+NT+I+G C   ++E A +   +M  K + P  V+ N L+ G C++  L  A   F  
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +      + VTY TLI  L K  +++ A  +L  M +K + P+  TY+ +     +  R
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           ++EA K    MV  G                 I P+ ++Y+  +N  C   + +DA ++F
Sbjct: 305 VDEAHKLLEQMVTQG-----------------IAPTVVTYNILLNSLCRADKLEDAFKLF 347

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRK 532
               Q+       TY  L+  L   ++
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQ 374



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 127/255 (49%), Gaps = 18/255 (7%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  R+++P   T+N +  G +++G+ EQ  ++   ++++G     + +  +I   C  G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
            ++A +  + M  K FK   +  + +++ LC+   +E+A +     + +    D++TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEK-MARYAPPDALTYGP 119

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++  LCK +R++DA   + EM  + + PD + Y  + + L +  ++EEA+     MV+  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK-- 177

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                          + I+P+ ++Y+  IN  C   R + A ++F+E   KG    + +Y
Sbjct: 178 ---------------QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY 222

Query: 521 MNLMNGLIKRRKSIS 535
             L++G  K++  ++
Sbjct: 223 NTLIDGFCKKKDLVA 237


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 268/551 (48%), Gaps = 52/551 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   YNT++    + G+L+  R L++ M    + P+  TY  ++ G C  G + EA+ ++
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 199

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      P V TY +L+   C +    +A  +  EM +    P++VTYN +IN     
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 259

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR  +A + ++ L  +G +P+ V++  ++K  C   + +   ++   M E    P+ VT+
Sbjct: 260 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 319

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           + L+   C+ G +E A ++++ M   G   NT   N +++T+C + ++D+A+  LN+   
Sbjct: 320 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 379

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D +SY T++ G  R E+   A +L  EM  +   P+  T+N  I  L Q G  EQ
Sbjct: 380 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 439

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ-FHN------------------ 349
           A  ++ ++ + G   +  T+N +++GFC +G+V+ AL+ F++                  
Sbjct: 440 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLC 499

Query: 350 -------------KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
                        +M++K   P++VT N+L+S  C++G++++A++     +  G   + +
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 559

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYNTL+  + K+   E+A  LL  +    + PD  TY++I   L    R+EEA K   I+
Sbjct: 560 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 619

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
            + G                 + P ++ Y++ +   C +     A+  F      G   N
Sbjct: 620 QDLG-----------------MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 662

Query: 517 KSTYMNLMNGL 527
           + TY+ L+ GL
Sbjct: 663 ELTYITLIEGL 673



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 246/498 (49%), Gaps = 23/498 (4%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L+     +G  P+      L+   C+ G   +A RV+    ++ +  DV+ YN L+ G+C
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G L+ A RL   + S+ + PD  TY  +I    + GR  EA  L+D++   G +P+ V
Sbjct: 156 RYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+ ++++  CK     +A +++  M   G +P+ VTYN +I+  C+ G +++A   ++ +
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              G + +T++  T+L  LC  K+ ++   L     ++    +EV++  L+  + R    
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            RA+++ ++M       +T   N +I  + + G+ + A   LN +   G  PD  ++ T+
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 392

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           + G C   + E A +   +MV K+  P+ VT N  +  LC++G++E+A          G 
Sbjct: 393 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            V+ VTYN L++  C + R++ A  L   M  K   P+  TY  + T L  + RL+ A +
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAE 509

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             + M++                 ++  P+ ++++  ++  C +G   +A+++ E+  + 
Sbjct: 510 LLAEMLQ-----------------KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 552

Query: 512 GIAINKSTYMNLMNGLIK 529
           G   N  TY  L++G+ K
Sbjct: 553 GCTPNLITYNTLLDGITK 570



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 241/468 (51%), Gaps = 3/468 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN I++ + ++G++++ R+ L+ +   G  P+  +Y  ++ G C    
Sbjct: 237 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 296

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++   +   M +   +P+  T++ML+  +C  GM+E A ++ ++M       +    N 
Sbjct: 297 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 356

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR  +AF+ ++ +  +G  P+ +++  ++K  C+  + + A ++++ M    
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT I   C+ G +E+A  +++ M   G ++N +T N +++  C + ++D A 
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S   +    + ++Y TL+TG    E+ + A +L  EM ++   P+  T+N ++   
Sbjct: 477 ELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  ++AI+++ ++++ G  P+  T+NT++ G   +   E+AL+  + +V     PDI
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + ++  L RE  +E+A+K F      G    +V YN ++ +LCK    + A    + 
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L     L+E +     +   G +N  +++
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLE 701



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 192/397 (48%), Gaps = 20/397 (5%)

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           S  A +L+D     G  P+      +I+  C+ G+   A +++R  E +G + D   YNT
Sbjct: 90  SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+   C+ G ++ A R++  M    +  +  T   I+  LC   ++ EA  LL+    RG
Sbjct: 150 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
                V+Y  L+    +     +A+++ DEM+ +   P+  TYN +I G+ + G+ + A 
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           + LN L   G  PD  ++ T++ G C+  + E   +   +M+EK+  P+ VT ++L+   
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G++E+A++        G A ++   N +I+++CK+ R++DAF  L+ M      PD 
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            +Y  +   L  + R E+A++    MV                  +   P+ ++++  I 
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVR-----------------KNCPPNEVTFNTFIC 429

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             C +G  + A  + E+  + G  +N  TY  L+NG 
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 20/339 (5%)

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A+  A     A R++D    +G   +      ++  LC   +  +A  +L +A + G  +
Sbjct: 83  ASSPATTSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV 142

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D  +Y TL+ GY R  + + A +L   M    + P  +TY  +I GL   G+  +A+ +L
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 199

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           +++L  G  P   T+  ++   C      +A++  ++M  K   P+IVT N++++G+CRE
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 259

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G ++ A +F       G   D+V+Y T++  LC  +R ED   L +EM EK   P+  T+
Sbjct: 260 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 319

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +       G +E A +    M   G         NT+             +  IN  C
Sbjct: 320 DMLVRFFCRGGMVERAIQVLEQMSGHG------CAANTTLC-----------NIVINTIC 362

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            QGR  DA Q        G + +  +Y  ++ GL +  +
Sbjct: 363 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 268/551 (48%), Gaps = 52/551 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   YNT++    + G+L+  R L++ M    + P+  TY  ++ G C  G + EA+ ++
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      P V TY +L+   C +    +A  +  EM +    P++VTYN +IN     
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR  +A + ++ L  +G +P+ V++  ++K  C   + +   ++   M E    P+ VT+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           + L+   C+ G +E A ++++ M   G   NT   N +++T+C + ++D+A+  LN+   
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D +SY T++ G  R E+   A +L  EM  +   P+  T+N  I  L Q G  EQ
Sbjct: 349 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 408

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ-FHN------------------ 349
           A  ++ ++ + G   +  T+N +++GFC +G+V+ AL+ F++                  
Sbjct: 409 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLC 468

Query: 350 -------------KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
                        +M++K   P++VT N+L+S  C++G++++A++     +  G   + +
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYNTL+  + K+   E+A  LL  +    + PD  TY++I   L    R+EEA K   I+
Sbjct: 529 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
            + G                 + P ++ Y++ +   C +     A+  F      G   N
Sbjct: 589 QDLG-----------------MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631

Query: 517 KSTYMNLMNGL 527
           + TY+ L+ GL
Sbjct: 632 ELTYITLIEGL 642



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 252/516 (48%), Gaps = 23/516 (4%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  L  L  +  L E   L+     +G  P+      L+   C+ G   +A RV+    +
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
           + +  DV+ YN L+ G+C  G L+ A RL   + S+ + PD  TY  +I    + GR  E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  L+D++   G +P+ VT+ ++++  CK     +A +++  M   G +P+ VTYN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C+ G +++A   ++ +   G + +T++  T+L  LC  K+ ++   L     ++    
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           +EV++  L+  + R     RA+++ ++M       +T   N +I  + + G+ + A   L
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           N +   G  PD  ++ T++ G C   + E A +   +MV K+  P+ VT N  +  LC++
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++E+A          G  V+ VTYN L++  C + R++ A  L   M  K   P+  TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             + T L  + RL+ A +  + M++                 ++  P+ ++++  ++  C
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQ-----------------KDCAPNVVTFNVLVSFFC 503

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +G   +A+++ E+  + G   N  TY  L++G+ K
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 241/468 (51%), Gaps = 3/468 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTYN I++ + ++G++++ R+ L+ +   G  P+  +Y  ++ G C    
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++   +   M +   +P+  T++ML+  +C  GM+E A ++ ++M       +    N 
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR  +AF+ ++ +  +G  P+ +++  ++K  C+  + + A ++++ M    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT I   C+ G +E+A  +++ M   G ++N +T N +++  C + ++D A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S   +    + ++Y TL+TG    E+ + A +L  EM ++   P+  T+N ++   
Sbjct: 446 ELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G  ++AI+++ ++++ G  P+  T+NT++ G   +   E+AL+  + +V     PDI
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + ++  L RE  +E+A+K F      G    +V YN ++ +LCK    + A    + 
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           M      P+  TY  +   L     L+E +     +   G +N  +++
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLE 670



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 21/210 (10%)

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           + +A +  ++   +   PD+  C  L+  LCR G    A +  R+    G AVD   YNT
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L++  C+  +L+ A  L++ M    + PD YTY  I   L + GR+ EA      M+  G
Sbjct: 119 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 461 ----KINHQVVQPNTSKTP------EEID--------PSSISYSEKINEHCSQGRYKDAL 502
                + + V+     K+       E +D        P+ ++Y+  IN  C +GR  DA 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +        G   +  +Y  ++ GL   ++
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 264/506 (52%), Gaps = 23/506 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y ++L+ L K       R +L  MK++G+      ++ ++  Y + G L++A++V+
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            LM +    P++   N  I+ +  A  LE+A R  + M+ + ++P+VVTYN +I  + + 
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVT 187
            R  EA +L++++   G  P+ V++  ++ + CKE +I +   +++ M +E+G  PD VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI    K  + +EA   +     KG +++ +  + I+H LC E ++ EA  L+N   
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMD 445

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 D V+Y  ++ G+ R  + ++A KL   M      P+T +Y A++ G+ ++GK+ 
Sbjct: 446 CPP---DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 502

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A +M+N   +    P+  T++ I+HG   EG++ +A     +MV K F P  V  N+LL
Sbjct: 503 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 562

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LCR+G   +A KF    + KG A++ V + T+I   C+   L+ A  +L +M      
Sbjct: 563 QSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKH 622

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            D +TY  +   L + GR+ EA +    M+  G                 IDP+ ++Y  
Sbjct: 623 ADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG-----------------IDPTPVTYRT 665

Query: 488 KINEHCSQGRYKDALQIFEE--TRQK 511
            I+ +C  G+  D + I E+  +RQK
Sbjct: 666 VIHRYCQMGKVDDLVAILEKMISRQK 691



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 236/469 (50%), Gaps = 6/469 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLG 59
           M   GCLPD V+Y TI+  L K+ ++ EVRDL+  M K+ GLVP++ TYN L+    K  
Sbjct: 338 MHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD 397

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
              EA+  +    +     D   Y+ +++  C  G + EA  L  EM+     PDVVTY 
Sbjct: 398 HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCP---PDVVTYT 454

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            ++N F   G   +A KL+  +  HG KPN V++  ++   C+ GK  +A +++   EE+
Sbjct: 455 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 514

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            +SP+ +TY+ ++    + G + EA  ++  M  KG     + +N +L +LC + +  EA
Sbjct: 515 WWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 574

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
              +     +G  ++ V++ T+I G+ ++++ + AL + D+M         FTY  ++  
Sbjct: 575 RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDT 634

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+  +A +++ ++L  G+ P   T+ T+IH +C  G+V+  +    KM+ +     
Sbjct: 635 LGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT 694

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   N ++  LC  G LE+A       +      D+ T   L+    K+     A+ +  
Sbjct: 695 IY--NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVAC 752

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            M  + L PD      +   LV  G+++EA K    +VE G I+ Q ++
Sbjct: 753 RMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSLK 801



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 230/461 (49%), Gaps = 6/461 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +  NT +D   +  +L +    L  M+  G+VPN  TYN ++ GYC L  
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           ++EA+ +++ M     LPD  +Y  ++   C    + E   L K+M +   L+PD VTYN
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   +   + EA   + +  E G + + + ++ ++   CKEG++ +A  ++  M+  
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMD-- 445

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              PD VTY  +++  C+ G +++A +++ VM   G K NT++   +L+ +C   K  EA
Sbjct: 446 -CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 504

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++Y  ++ G  R+ K + A  +  EM  +   P     N ++  
Sbjct: 505 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQS 564

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+T +A   + E L  G   +   F T+IHGFC   +++ AL   + M   +   D
Sbjct: 565 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHAD 624

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + T   L+  L ++G + +A +  +  + KG     VTY T+I   C+  +++D   +L 
Sbjct: 625 VFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILE 684

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M  ++    R  Y  +   L   G+LEEA      ++ T 
Sbjct: 685 KMISRQ--KCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTA 723



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 29/386 (7%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P A +  +M+  Y + G++  A K++  M+  G  P+ +  NT ID   +A  +E+A R 
Sbjct: 242 PEAFS-RVMVS-YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 299

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           ++ M   G+  N +T N ++   C   +++EA  LL     +G   D+VSY T I GY  
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT-IMGYLC 358

Query: 268 DEKANRALKLWDEMK----ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
            EK  R +++ D MK    E  ++P   TYN +I  L++    ++A+  L +  + G   
Sbjct: 359 KEK--RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D+  ++ I+H  C EG++ +A    N+M      PD+VT   +++G CR G ++KA K  
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLL 473

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +     G   ++V+Y  L++ +C+  +  +A  +++  EE    P+  TY+ I   L   
Sbjct: 474 QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 533

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G+L EA      MV  G                   P  +  +  +   C  GR  +A +
Sbjct: 534 GKLSEACDVVREMVLKGFF-----------------PGPVEINLLLQSLCRDGRTHEARK 576

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
             EE   KG AIN   +  +++G  +
Sbjct: 577 FMEECLNKGCAINVVNFTTVIHGFCQ 602



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 22/360 (6%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D + Y ++++   K    + + R++ +M R+G+       + ++ +     +L +A 
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    + G   + +   T I  + R  +  +AL+  + M+   I+P+  TYN MI G 
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPD 359
               + E+AI++L ++   G +PD+ ++ TI+   C E ++ +      KM  E    PD
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+  L +    ++AL F +    KG  +D + Y+ ++ +LCKE R+ +A  L++
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLIN 442

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM+     PD  TY A+       G +++A+K   +M   G       +PNT        
Sbjct: 443 EMD---CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH------KPNT-------- 485

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +SY+  +N  C  G+  +A ++   + +   + N  TY  +M+GL +R   +S+A D
Sbjct: 486 ---VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL-RREGKLSEACD 541


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 248/529 (46%), Gaps = 21/529 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY+ ++    + G+L         + K G   N    N L+ G C    L EAM +
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 68  -VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTLIN 123
            V  M +    PDV +YN L+ G+CN    EEA  L   M   +     P+VV+Y  +IN
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF  G+  +A+ L  E+ + GI+PN VT+  +I   CK   +D+A  + + M + G  P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN LI      G  +E  RM++ M   GLK +  T  ++L+ LC   +  EA  L 
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  ++G   +   YG LI GY      +    L + M E  + P    +N +    ++ 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A+ + N++ Q G+ PD   +  +I   C  G+V+ A+   N+M+ +   P+I   
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GLC     EKA +F+   + +G   D V +NT++ +LC + ++  A  L+  ME 
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P   +Y  +       GR++EA K   +M+  G                 + P   
Sbjct: 512 VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG-----------------LKPDEW 554

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +Y+  ++ +C  GR  DA  +F E  + GI     TY  +++GL   R+
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 235/491 (47%), Gaps = 35/491 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY T++D L K   ++    +   M  +G+ P+  TYN L+ GY  +G  KE 
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+++ M+ +   PD +TY  L+N  CN G   EA  L   M    + P+V  Y  LI+ 
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHG 352

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   E   L++ + E+G+ P+    NI+   Y K+  ID+A  I   M++ G SPD
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y  LIDA CK G +++A    + M  +G+  N    N++++ LC   K ++A     
Sbjct: 413 VVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D V + T++       +  +A +L D M+     P   +Y  +I G    G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVG 532

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT-- 362
           + ++A   L+ +L  G+ PDE T+NT++HG+C  G+++ A     +M+     P +VT  
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 363 ---------------------------------CNILLSGLCREGILEKALKFFRSWILK 389
                                             NI+L+GL +   +++A K F+S   K
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
              ++  T+N +I +L K  R EDA  L + +    L PD +TY  I   L+E G LEE 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 450 QKFTSIMVETG 460
               S M ++G
Sbjct: 713 DDLFSAMEKSG 723



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 262/550 (47%), Gaps = 21/550 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC PD V+YNT+L     + +  E  +LL   +D + +   PN  +Y I+++G+  
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G + +A  +   M      P+V TY  +I+G C A +++ A  + ++M    + PD  T
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN LI+ +   G+  E  ++++E+  HG+KP+  T+  ++ + C  G+  +A  +  +M 
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  P+   Y  LI      G + E   ++++M   GL  +    N I      +  +D
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  + N   ++G   D V+YG LI    +  + + A+  +++M    + P+ F +N+++
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           +GL    K E+A +   E+L  G+ PD   FNTI+   C++GQV KA +  + M     +
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P +++   L+ G C  G +++A K     +  G   D  TYNTL+   C+  R++DA+G+
Sbjct: 516 PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSK 473
             EM    + P   TY+ I   L  + R  EA++    M+ +GK      + ++    SK
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635

Query: 474 T--------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                           ++      +++  I      GR +DA+ +F      G+  +  T
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFT 695

Query: 520 YMNLMNGLIK 529
           Y  +   LI+
Sbjct: 696 YCLIAENLIE 705



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 217/452 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY ++L+ L   G+  E R L   M ++G+ PN   Y IL+ GY   G 
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   +++LM +N   PD   +N++   +    M++EA  +  +M+   L PDVV Y  
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ PN    N ++   C   K +KA +    M   G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V +NT++   C  G + +A R++D+M R G +   I+  T++   C   ++DEA 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+     G   DE +Y TL+ GY R  + + A  ++ EM    I P   TY+ ++ GL
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + +  +A ++   ++ SG   +   +N I++G      V++A +    +  K F+ +I
Sbjct: 599 FTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEI 658

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  E A+  F +    G   D  TY  +  +L +E  LE+   L S 
Sbjct: 659 TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSA 718

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           ME+    P+     A+   L+  G +  A  +
Sbjct: 719 MEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 208/436 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+   Y  ++     KG L+E+ DLL+ M + GL P+   +NI+ + Y K   + EA
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M + + M Q    PDV  Y  LI+  C  G +++A     +M +  + P++  +N+L+  
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                +  +A +   E+   GI+P+ V  N ++   C +G++ KA +++  ME  G  P 
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPG 517

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++Y TLI  +C  G ++EA + +DVM   GLK +  T NT+LH  C   ++D+AY +  
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G     V+Y T++ G F   + + A +L+  M       + + YN ++ GLS++ 
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A  +   L       + TTFN +I      G+ E A+     +      PD+ T  
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYC 697

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++   L  EG LE+    F +    G   +S   N L+  L     +  A   L +++EK
Sbjct: 698 LIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEK 757

Query: 425 KLGPDRYTYAAIHTAL 440
               +  T A + + L
Sbjct: 758 NFSLEASTTAMLISLL 773



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 200/413 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+  +N I  A  KK  ++E   + + MK+QGL P+   Y  L+   CKLG + +A
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA 432

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   + M      P+++ +N L+ G C     E+A     EM +  + PDVV +NT++  
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+ M+A +LID ++  G +P  +++  +I  +C  G+ID+A K +  M   G  PD
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYNTL+   C+AG +++A+ +   M R G+    +T +TILH L   ++  EA  L  
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +    G   +   Y  ++ G  ++   + A KL+  +  +       T+N MI  L +SG
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSG 672

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A+ +   +   G++PD  T+  I      EG +E+     + M +    P+    N
Sbjct: 673 RNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLN 732

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            L+  L   G + +A  +      K  ++++ T   LIS L ++     A  L
Sbjct: 733 ALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 213/477 (44%), Gaps = 59/477 (12%)

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           ++K+ PD  TY+ LI  F   GR    F     + + G + N +  N ++K  C   ++ 
Sbjct: 87  TIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLC 146

Query: 168 KACKI-VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM----GR--------- 213
           +A  I V+ M E G +PD V+YNTL+   C     EEA  ++ +M    GR         
Sbjct: 147 EAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSY 206

Query: 214 -------------------------KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
                                    +G++ N +T  T++  LC  + +D A  +      
Sbjct: 207 AIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID 266

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D  +Y  LI GY    K    +++ +EM    + P  +TY +++  L  +G+  +
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  + + +++ G+ P+   +  +IHG+ ++G + +     N MVE    PD    NI+ +
Sbjct: 327 ARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
              ++ ++++A+  F     +G + D V Y  LI +LCK  R++DA    ++M  + + P
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----------SKTPEE 477
           + + + ++   L    + E+A++F   M+  G I   VV  NT            K    
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG-IRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 478 ID--------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ID        P  ISY+  I  HC  GR  +A +  +     G+  ++ TY  L++G
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 22/368 (5%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
           +PD  TY+ LI   C+ G +E  F    ++ + G ++N I +N +L  LC  K+L EA  
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE---RQIMPSTFTYNAMI 297
           +L+    + G   D VSY TL+ G+  +++A  AL+L   M +   R   P+  +Y  +I
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G    G+ ++A ++  E++  G+ P+  T+ T+I G C    V++A     +M++K  K
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD  T N L+ G    G  ++ ++        G   D  TY +L++ LC   R  +A  L
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPE 476
              M  K + P+   Y  +       G L E     ++MVE G   +H +     +   +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 477 E-----------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           +                 + P  ++Y   I+  C  GR  DA+  F +   +G+A N   
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 520 YMNLMNGL 527
           + +L+ GL
Sbjct: 451 FNSLVYGL 458



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 124/282 (43%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P  ++Y T++      G+++E    L  M   GL P+  TYN L+ GYC+ G 
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  V   M +N   P V TY+ +++G        EA  L   M +     ++  YN 
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   ++    EAFKL   L     +    T NIMI    K G+ + A  +   +   G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  + +   + G +EE   +   M + G   N+  LN ++  L     +  A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
             L    ++ + L+  +   LI+   RDE  + A  L ++ +
Sbjct: 749 AYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYR 790


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 240/457 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  T N +++     G++     +L  + K G  PN  T N L+ G C  G 
Sbjct: 36  MQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGE 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+++   D +       D  +Y  L+NG C  G    A +L + +E     P+VV YNT
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EA+ L  E+D  GI PN +T++ +I  +C  G++ +A  ++  M    
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  TY  L+DA CK G ++EA  ++ VM ++G+K N ++ NT++   C   ++  A 
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++  ++G   +  SY  +I    + ++ + A+ L  E+  + ++P+T TY+++I G 
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+   A+D+L E+   G   D  T+ +++   C    ++KA     KM E+  +P+ 
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ GLC+ G  + A K F+  ++KG  ++  TYN +IS LCKE  L++A  + S+
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSK 455

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           MEE    PD  T+  I  +L E  + ++A+K    M+
Sbjct: 456 MEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 235/459 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  + +N I+ +L K         L   M+ +G+ P+  T NIL++ +C LG +  +  V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    P+  T N L+ G C  G ++++     ++ +     D V+Y TL+N   +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A KL+  +++   +PN V +N +I   CK+  +++A  +   M+  G  P+ +T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+TLI   C AG + EAF +++ M  K +  N  T   ++  LC E K+ EA  LL   +
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + VSY TL+ GY    +   A +++  M ++ + P+ ++YN MI  L +S + +
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++L E+L   M+P+  T++++I GFC  G++  AL    +M  +    D+VT   LL
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L+KA   F     +G   +  TY  LI  LCK  R ++A  L   +  K   
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
            + +TY  + + L + G L+EA    S M E G I   V
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAV 466



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 235/452 (51%), Gaps = 17/452 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P +  +N ++           A  L K+M+   + PD+ T N LIN F   G+   +F +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           + ++ + G +PN +T N ++K  C +G++ K+      +   GF  D V+Y TL++  CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G    A +++ ++  +  + N +  NTI+  LC +K ++EAY L +    RG + + ++
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI G+    +   A  L +EM  + I P+ +TY  ++  L + GK ++A ++L  + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G+ P+  ++NT++ G+C  G+V+ A Q  + MV+K   P++ + NI++  LC+   ++
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A+   R  + K    ++VTY++LI   CK  R+  A  LL EM  +    D  TY ++ 
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
            AL ++  L++A      M E G                 I P+  +Y+  I+  C  GR
Sbjct: 368 DALCKNQNLDKATALFMKMKERG-----------------IQPNKYTYTALIDGLCKGGR 410

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +K+A ++F+    KG  IN  TY  +++GL K
Sbjct: 411 HKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 195/384 (50%), Gaps = 17/384 (4%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P  +  N ++    K      A  + + M+  G  PD  T N LI+  C  G M  +F +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +  + + G + NTITLNT++  LC + ++ ++    +    +G+ +D+VSY TL+ G  +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             +   ALKL   +++R   P+   YN +I GL +     +A D+ +E+   G+ P+  T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           ++T+I+GFC  GQ+ +A    N+M+ K+  P++ T  IL+  LC+EG +++A        
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G   + V+YNTL+   C    +++A  +   M +K + P+ Y+Y  +   L +S R++
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA           ++ H+ + PNT           ++YS  I+  C  GR   AL + +E
Sbjct: 308 EAMNLLR------EVLHKNMVPNT-----------VTYSSLIDGFCKLGRITSALDLLKE 350

Query: 508 TRQKGIAINKSTYMNLMNGLIKRR 531
              +G   +  TY +L++ L K +
Sbjct: 351 MYHRGQPADVVTYTSLLDALCKNQ 374



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 53/301 (17%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A+ L+ +M+ + I P  FT N +I      G+   +  +L ++L+ G  P+  T NT++ 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C +G+V+K+L FH+K+V + F+ D V+   LL+GLC+ G    ALK  R    +    
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 394 DSVTYNTLISSLCKER-----------------------------------RLEDAFGLL 418
           + V YNT+I  LCK++                                   +L +AFGLL
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +EM  K + P+ YTY  +  AL + G+++EA+   ++M                 T E +
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM-----------------TKEGV 251

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            P+ +SY+  ++ +C  G  ++A Q+F    QKG+  N  +Y N+M   + + K + +A+
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY-NIMIDRLCKSKRVDEAM 310

Query: 539 D 539
           +
Sbjct: 311 N 311


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 264/507 (52%), Gaps = 21/507 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y ++L+ L K       R +L  MK++G+      +  ++  Y + G L++A++V+
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            LM +    P++   N  I+ +  A  LE+A R  + M+ + ++P+VVTYN +I  + + 
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVT 187
            R  EA +L+D++   G  P+ V++  ++ + CKE +I +   +++ M +E+G   D VT
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI    K  + +EA   +     KG +++ +  + I+H LC E ++ EA  L+N   
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448

Query: 248 KRGYYL-DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +G+   D V+Y  ++ G+ R  + ++A KL   M      P+T +Y A++ GL ++GK+
Sbjct: 449 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS 508

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A +M+N   +    P+  T++ ++HG   EG++ +A     +MV K F P  V  N+L
Sbjct: 509 LEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLL 568

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L  LCR+G   +A KF    + KG A++ V + T+I   C+   L+ A  +L +M     
Sbjct: 569 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 628

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D +TY  +  AL + GR+ EA +    M+  G                 IDP+ ++Y 
Sbjct: 629 HADVFTYTTLVDALGKKGRIAEATELMKKMLHKG-----------------IDPTPVTYR 671

Query: 487 EKINEHCSQGRYKDALQIFEET--RQK 511
             I+ +C   +  D + I E+   RQK
Sbjct: 672 TVIHRYCQMEKVDDLVAILEKMILRQK 698



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 232/462 (50%), Gaps = 4/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +  NT +D   +  +L +    L  M+  G+VPN  TYN ++ GYC L  
Sbjct: 271 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 330

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           ++EA+ ++D M     LPD  +Y  ++   C    + E   L K+M +   L+ D VTYN
Sbjct: 331 VEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYN 390

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   +   + EA   + + +E G + + V ++ ++   CKEG++ +A  ++  M   
Sbjct: 391 TLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSK 450

Query: 180 GF-SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           G   PD VTY  +++  C+ G +++A +++ +M   G K NT++   +L+ LC   K  E
Sbjct: 451 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLE 510

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  ++N + ++ +  + ++Y  L+ G  ++ K + A  +  EM  +   P     N ++ 
Sbjct: 511 AREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQ 570

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G+T +A   + E L  G   +   F T+IHGFC   +++ AL   + M   +   
Sbjct: 571 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 630

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+ T   L+  L ++G + +A +  +  + KG     VTY T+I   C+  +++D   +L
Sbjct: 631 DVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAIL 690

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            +M  ++    +  Y  +   L   G+LEEA K    ++ T 
Sbjct: 691 EKMILRQ--KCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTA 730



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 207/412 (50%), Gaps = 39/412 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVS------ 53
           M   GCLPD V+Y TI+  L K+ ++ EVRDL+  M K+ GLV ++ TYN L+       
Sbjct: 341 MPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHD 400

Query: 54  ----------------------GY-------CKLGWLKEAMRVV-DLMTQNKSLPDVWTY 83
                                 GY       CK G + EA  ++ +++++    PDV TY
Sbjct: 401 HADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 460

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
             ++NG+C  G +++A +L + M +    P+ V+Y  L+N    +G+S+EA ++++  +E
Sbjct: 461 TAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEE 520

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
               PN++T+++++    KEGK+ +AC +VR M   GF P  V  N L+ + C+ G   E
Sbjct: 521 QWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 580

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A + M+    KG  +N +   T++H  C   +LD A  +L+       + D  +Y TL+ 
Sbjct: 581 ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 640

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              +  +   A +L  +M  + I P+  TY  +I    Q  K +  + +L +++      
Sbjct: 641 ALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKC- 699

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
            +T +N +I   C  G++E+A +   K++  + + D  TC  L+ G  + G+
Sbjct: 700 -KTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGV 750



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 182/375 (48%), Gaps = 25/375 (6%)

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           Y + G++  A K++  M+  G  P+ +  NT ID   +A  +E+A R ++ M   G+  N
Sbjct: 255 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 314

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T N ++   C   +++EA  LL+    +G   D+VSY T I GY   EK  R +++ D
Sbjct: 315 VVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYT-IMGYLCKEK--RIVEVRD 371

Query: 280 EMK----ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            MK    E  ++    TYN +I  L++    ++A+  L +  + G   D+  ++ I+H  
Sbjct: 372 LMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHAL 431

Query: 336 CSEGQVEKALQFHNKMVEKSF-KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           C EG++ +A    N+M+ K    PD+VT   +++G CR G ++KA K  +     G   +
Sbjct: 432 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPN 491

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +V+Y  L++ LC+  +  +A  +++  EE+   P+  TY+ +   L + G+L EA     
Sbjct: 492 TVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVR 551

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            MV  G                   P  +  +  +   C  GR  +A +  EE   KG A
Sbjct: 552 EMVLKGFF-----------------PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 594

Query: 515 INKSTYMNLMNGLIK 529
           IN   +  +++G  +
Sbjct: 595 INVVNFTTVIHGFCQ 609



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 174/361 (48%), Gaps = 20/361 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D + Y ++++   K    + A R++ +M R+G+         ++ +     +L +A 
Sbjct: 206 YRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDAL 265

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    + G   + +   T I  + R  +  +AL+  + M+   I+P+  TYN MI G 
Sbjct: 266 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 325

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPD 359
               + E+AI++L+++   G +PD+ ++ TI+   C E ++ +      KM  E     D
Sbjct: 326 CDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRD 385

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+  L +    ++AL F +    KG  +D V Y+ ++ +LCKE R+ +A  L++
Sbjct: 386 QVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLIN 445

Query: 420 EMEEK-KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           EM  K    PD  TY A+       G +++A+K   IM   G       +PNT       
Sbjct: 446 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHG------YKPNT------- 492

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
               +SY+  +N  C  G+  +A ++   + ++  + N  TY  LM+GL K  K +S+A 
Sbjct: 493 ----VSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGK-LSEAC 547

Query: 539 D 539
           D
Sbjct: 548 D 548


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 220/423 (52%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           K G  P+  T    + G+C  G + +A+   D +       D  +Y  LING C  G  +
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
            A  L +  +   + PDVV YNT+I+   +     +AF L  E     I P+  T+N +I
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
             +C  GK+  A  +   M      PD  T++ L+D  CK GN++EA  ++ +M ++ +K
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            + +T ++++   C   ++++A  + N+ S RG   +  SY  +I G+ + +  + A+KL
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           + EM  +QI P   TY+++I GL +SG+   A+++++E+   G  PD  T+N+I+   C 
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           +  V+KA+    K+  +  +PD+ T  IL+ GLC+ G LE A K F   ++KG  +D   
Sbjct: 556 KHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYA 615

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y  +I   C +   ++A  LLS+MEE    PD  TY  I  +L E    + A+K    M+
Sbjct: 616 YTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675

Query: 458 ETG 460
             G
Sbjct: 676 MRG 678



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 210/414 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +T  T +     KG++++       +   G   ++ +Y  L++G CK+G  K A+ +
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +         PDV  YN +I+G C    + +AF L  E  S ++ PDV TYN LI+ F  
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L +++    I P+  T +I++  +CK+G I +A  ++  M +    PD VT
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++L+D  C    + +A  + + M  +G+  N  + N +++  C  K +DEA  L     
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +  + D ++Y +LI G  +  + + AL+L DEM  R   P   TYN+++  L +    +
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +AI +L +L   G+ PD  T+  ++ G C  G++E A +    ++ K +  D+    +++
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            G C +G+ ++AL         G   D+ TY  +I SL ++   + A  LL EM
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 250/545 (45%), Gaps = 54/545 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P ++ +  IL +L K    + V  L   M+ +G+  N    NIL++ +C+LG +      
Sbjct: 108 PPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIP----- 162

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT----YNTLIN 123
                        + +++L  G     +L++ F  RK +E  K L  +V     +  L  
Sbjct: 163 -------------FAFSVLTRGVYWIEILKDCFD-RKNLEDFKRLCWIVLILWDFKRLFL 208

Query: 124 RFFESGR---SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           + F   R    + +FK++ E  +  IK   +  +  I       KI K          NG
Sbjct: 209 KDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILK----------NG 258

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD +T  T I   C  G + +A    D +   G  ++ ++  T+++ LC   +   A 
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL 318

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +    D V Y T+I G  +D+  N A  L+ E   ++I P  FTYNA+I G 
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              GK + AID+ N++    +IPD  TF+ ++ GFC +G +++A      M+++S KPD+
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + L+ G C    + KA   F +   +G   +  +YN +I+  CK + +++A  L  E
Sbjct: 439 VTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQK----------------FTSIMVETGKINH 464
           M  K++ PD  TY+++   L +SGR+  A +                + SI+    K +H
Sbjct: 499 MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH 558

Query: 465 --QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
             + +   T    + I P   +Y+  +   C  G+ +DA ++FE+   KG  ++   Y  
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618

Query: 523 LMNGL 527
           ++ G 
Sbjct: 619 MIQGF 623



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 199/385 (51%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V+Y T+++ L K G+     +LL     + + P+   YN ++ G CK   + +A  + 
Sbjct: 297 DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
                 +  PDV+TYN LI+G+C  G L++A  L  +M S  ++PDV T++ L++ F + 
Sbjct: 357 SEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKD 416

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   EA  ++  + +  IKP+ VT++ ++  YC   +++KA  I   M   G + +  +Y
Sbjct: 417 GNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSY 476

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N +I+  CK   ++EA ++   M  K +  + IT ++++  LC   ++  A  L++    
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHY 536

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   D ++Y +++    +    ++A+ L  ++K + I P   TY  ++ GL QSGK E 
Sbjct: 537 RGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLED 596

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +  +LL  G   D   +  +I GFC +G  ++AL   +KM E    PD  T  I++ 
Sbjct: 597 ARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIIL 656

Query: 369 GLCREGILEKALKFFRSWILKGKAV 393
            L  +   + A K  R  I++G  V
Sbjct: 657 SLFEKDENDMAEKLLREMIMRGLLV 681



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 169/316 (53%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            PD  TYN ++      GKL +  DL + M  + ++P+  T++ILV G+CK G +KEA  
Sbjct: 365 FPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKN 424

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+ +M +    PDV TY+ L++G+C    + +A  +   M    +  +V +YN +IN F 
Sbjct: 425 VLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFC 484

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     EA KL  E+    I P+ +T++ +I   CK G+I  A ++V  M   G  PD +
Sbjct: 485 KIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDII 544

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+++DA CK  ++++A  ++  +  +G++ +  T   ++  LC   KL++A  +    
Sbjct: 545 TYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDL 604

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +GY LD  +Y  +I G+      + AL L  +M+E   +P   TY  +I  L +  + 
Sbjct: 605 LVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDEN 664

Query: 307 EQAIDMLNELLQSGMI 322
           + A  +L E++  G++
Sbjct: 665 DMAEKLLREMIMRGLL 680


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 251/498 (50%), Gaps = 18/498 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V Y T+LD L K       R +L  M ++G+      +  ++  Y + G L+ A+RV+ L
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    P +   N  I      G LE+A +  + M+   + PD+VTYN+LI  + +  R
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA-CKIVRNMEENGFSPDCVTYN 189
             +A +LI  L   G  P+ V++  ++ + CKE KI++  C + + +  +   PD VTYN
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI    K G+ ++A   +     KG  ++ +  + I+H+ C + ++DEA  L+     R
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V+Y  ++ G+ R  + + A K+  +M +    P+T +Y A++ GL  SGK+ +A
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            +M+N   +    P+  T+  ++HG   EG++ +A     +MVEK F P  V  N+L+  
Sbjct: 501 REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC+   + +A K+    + KG A++ V + T+I   C+   +E A  +L +M      PD
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY A+  AL + GRL+EA +    M+  G                 +DP+ ++Y   I
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKG-----------------LDPTPVTYRSVI 663

Query: 490 NEHCSQGRYKDALQIFEE 507
           + +   GR  D L + E+
Sbjct: 664 HRYSQWGRVDDMLNLLEK 681



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 235/461 (50%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P     NT +  L K GKL +    L  M+  G+ P+  TYN L+ GYC L  
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYN 119
           +++A+ ++  +      PD  +Y  ++   C    +EE   L ++M  +  L+PD VTYN
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   + G + +A   + E  + G   + V ++ ++  +C++G++D+A  +V +M   
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD VTY  ++D  C+ G ++EA +++  M + G K NT++   +L+ LC   K  EA
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++YG ++ G  R+ K + A  L  EM E+   P+    N +I  
Sbjct: 501 REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L Q+ K  +A   L E L  G   +   F T+IHGFC  G +E AL   + M      PD
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT   L   L ++G L++A +     + KG     VTY ++I    +  R++D   LL 
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLE 680

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M +++  P R  Y  +   L + G LEEA+K    ++ T 
Sbjct: 681 KMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTA 719



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 227/457 (49%), Gaps = 3/457 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLVPNRTTYNILVSGYCKLGWLKE 63
           GC PD V+Y T++  L K+ K+ EV+ L+  M     L+P++ TYN L+    K G   +
Sbjct: 335 GCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADD 394

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +          D   Y+ +++ +C  G ++EA  L  +M S    PDVVTY  +++
Sbjct: 395 ALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVD 454

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   GR  EA K++ ++ +HG KPN V++  ++   C  GK  +A +++   EE+ ++P
Sbjct: 455 GFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTP 514

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TY  ++    + G + EA  +   M  KG     + +N ++ +LC  +K+ EA   L
Sbjct: 515 NAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYL 574

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G  ++ V++ T+I G+ +      AL + D+M      P   TY A+   L + 
Sbjct: 575 EECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKK 634

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ ++A +++ ++L  G+ P   T+ ++IH +   G+V+  L    KM+++  +P     
Sbjct: 635 GRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVY 692

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  LC  G LE+A K     +     VD+ T + L+ S  K+     A+ +   M  
Sbjct: 693 NQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFR 752

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           + L PD      +   LV  G+L EA       VE G
Sbjct: 753 RNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERG 789



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 182/413 (44%), Gaps = 51/413 (12%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            +  ++  +  +G+   A +++  + + G++P+    N  I    K GK++KA K +  M
Sbjct: 237 AFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERM 296

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +  G  PD VTYN+LI   C    +E+A  ++  +  KG   + ++  T++  LC EKK+
Sbjct: 297 QVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI 356

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           +E   L+                                 +W+      ++P   TYN +
Sbjct: 357 EEVKCLMEKM------------------------------VWNS----NLIPDQVTYNTL 382

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I  LS+ G  + A+  L E    G   D+  ++ I+H FC +G++++A      M  +  
Sbjct: 383 IHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGC 442

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            PD+VT   ++ G CR G +++A K  +     G   ++V+Y  L++ LC   +  +A  
Sbjct: 443 NPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEARE 502

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           +++  EE    P+  TY A+   L   G+L EA   T  MVE G                
Sbjct: 503 MINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFF-------------- 548

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              P+ +  +  I   C   +  +A +  EE   KG AIN   +  +++G  +
Sbjct: 549 ---PTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 598



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 167/360 (46%), Gaps = 19/360 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +S   V Y T++D   K    + A R++ +M R+G++        ++ +     KL  A 
Sbjct: 196 YSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNAL 255

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K G         T I    +  K  +ALK  + M+   I P   TYN++I G 
Sbjct: 256 RVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGY 315

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPD 359
               + E A++++  L   G  PD+ ++ T++   C E ++E+      KMV  S   PD
Sbjct: 316 CDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPD 375

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+  L + G  + AL F +    KG  +D V Y+ ++ S C++ R+++A  L+ 
Sbjct: 376 QVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI 435

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M  +   PD  TY AI       GR++EA+K    M + G       +PNT        
Sbjct: 436 DMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHG------CKPNT-------- 481

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +SY+  +N  C  G+  +A ++   + +     N  TY  +M+GL +R   +S+A D
Sbjct: 482 ---VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGL-RREGKLSEACD 537



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 153/354 (43%), Gaps = 33/354 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTY  I+D   + G+++E + +L  M K G  PN  +Y  L++G C  G 
Sbjct: 437 MYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGK 496

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  ++++  ++   P+  TY  +++G    G L EA  L +EM      P  V  N 
Sbjct: 497 SLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINL 556

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++ + +EA K ++E    G   N V    +I  +C+ G ++ A  ++ +M  +G
Sbjct: 557 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSG 616

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH------------ 228
             PD VTY  L DA  K G ++EA  ++  M  KGL    +T  +++H            
Sbjct: 617 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDML 676

Query: 229 ---------------------TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
                                 LC    L+EA  LL    +    +D  +   L+  Y +
Sbjct: 677 NLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLK 736

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
              A  A K+   M  R + P       +   L   GK  +A +++   ++ G+
Sbjct: 737 KGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 33/173 (19%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPN----------------------- 44
           PD VTY  + DAL KKG+L+E  +L+  M  +GL P                        
Sbjct: 619 PDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNL 678

Query: 45  ----------RTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
                     RT YN ++   C  G L+EA +++  + +  S  D  T ++L+  +   G
Sbjct: 679 LEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKG 738

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +   A+++   M    L PD+     +  +    G+ +EA  L+    E GI+
Sbjct: 739 VAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 229/433 (52%), Gaps = 1/433 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P + T+N +L  L +    ++   + +++K + +V +  ++ I++ G C+ G+  + 
Sbjct: 119 GHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKG 177

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++ ++ +    P+V  Y  LI+G C  G +  A  L  +M  L L+P+  TY+ L+N 
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNG 237

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   E F++ + +   GI PNA  +N +I  YC +G +DKA K+   M E G +  
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACG 297

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI   C+     EA +++  + + GL  N +T N +++  C  +K+D A  L N
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFN 357

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G     V+Y TLI GY + E    AL L  EM+ER I PS  TY  +I   ++  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            TE+A +M + + +SG++PD  T++ ++HG C  G +++A +    + E   +P+ V  N
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+EG   +AL+     +  G   +  ++ + I  LC++ + ++A  LL +M   
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINS 537

Query: 425 KLGPDRYTYAAIH 437
            L P    Y  +H
Sbjct: 538 GLKPSVSLYKMVH 550



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 194/360 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E FG  P+ V Y T++D   K G +   ++L   M + GLVPN  TY++L++G+ K G 
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGL 243

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +E  ++ + M ++  +P+ + YN LI+ +CN GM+++AF++  EM    +   V+TYN 
Sbjct: 244 QREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA KL+ ++++ G+ PN VT+NI+I  +C   K+D A ++   ++ +G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSG 363

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VTYNTLI    K  N+  A  ++  M  + +  + +T   ++         ++A 
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKAC 423

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   K G   D  +Y  L+ G         A KL+  + E  + P++  YN MI G 
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGY 483

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G + +A+ +LNE++QSGM+P+  +F + I   C + + ++A     +M+    KP +
Sbjct: 484 CKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV 543



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 176/331 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P+  TY+ +++  FK+G   E   +  +MK+ G+VPN   YN L+S YC  G 
Sbjct: 219 MNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGM 278

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A +V   M +      V TYN+LI G C      EA +L  ++  + L P++VTYN 
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +   A +L ++L   G+ P  VT+N +I  Y K   +  A  +V+ MEE  
Sbjct: 339 LINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTY  LIDA  +  + E+A  M  +M + GL  +  T + +LH LC    + EA 
Sbjct: 399 IAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEAS 458

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  +     + V Y T+I GY ++  + RAL+L +EM +  ++P+  ++ + I  L
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLL 518

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +  K ++A  +L +++ SG+ P  + +  +
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 208/468 (44%), Gaps = 54/468 (11%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y+ ++N + ++   ++A      M     +P   T+N L+     S    +A+ + +EL 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
              +  +A +  IMIK  C+ G   K  +++  +EE G SP+ V Y TLID  CK GN+ 
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  +   M R GL  N        HT                            Y  L+
Sbjct: 211 LAKNLFCKMNRLGLVPNP-------HT----------------------------YSVLM 235

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+F+        ++++ MK   I+P+ + YN +I      G  ++A  +  E+ + G+ 
Sbjct: 236 NGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIA 295

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
               T+N +I G C   +  +A++  +K+ +    P+IVT NIL++G C    ++ A++ 
Sbjct: 296 CGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRL 355

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F      G +   VTYNTLI+   K   L  A  L+ EMEE+ + P + TY  +  A   
Sbjct: 356 FNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFAR 415

Query: 443 SGRLEEAQKFTSIMVETGKI----------NHQVVQPNTSKTPE--------EIDPSSIS 484
               E+A +  S+M ++G +          +   V  N  +  +         + P+S+ 
Sbjct: 416 LNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVI 475

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  I+ +C +G    AL++  E  Q G+  N +++ + +  L +  K
Sbjct: 476 YNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEK 523



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VTY  ++DA  +     +  ++ S M+K GLVP+  TY++L+ G C  G +KEA ++
Sbjct: 401 PSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKL 460

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              + +    P+   YN +I+G+C  G    A RL  EM    ++P+V ++ + I     
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCR 520

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
             +  EA  L+ ++   G+KP+   + ++ K
Sbjct: 521 DEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 127/316 (40%), Gaps = 56/316 (17%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIW-GLSQSGKTEQAIDMLNELLQSGMIPDETT 327
            +++ AL L  +M +     +   +N   + GL  +  +   I  LN LL SGM+P   +
Sbjct: 2   SQSHEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFI--LNHLLSSGMLPQAQS 59

Query: 328 --------------------------------FNTIIHGFCSEGQVEKALQFHNKMVEKS 355
                                           ++T+++ +      ++AL F + M+ + 
Sbjct: 60  LILRLISGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEG 119

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDA 414
             P   T N LL  L R    +KA   F    LK K V D+ ++  +I   C+       
Sbjct: 120 HVPLSNTFNNLLCLLIRSNYFDKAWWIFNE--LKSKVVLDAYSFGIMIKGCCEAGYFVKG 177

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH---------- 464
           F LL+ +EE  L P+   Y  +     + G +  A+     M   G + +          
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNG 237

Query: 465 ---QVVQPNTSKTPEE-----IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
              Q +Q    +  E      I P++ +Y+  I+E+C+ G    A ++F E R+KGIA  
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACG 297

Query: 517 KSTYMNLMNGLIKRRK 532
             TY  L+ GL + +K
Sbjct: 298 VMTYNILIGGLCRGKK 313


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 262/531 (49%), Gaps = 17/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T N I+ ++ K  + + V      M    + PN +++NIL+S  C  G LK+A+ +
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNI 197

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M +N  +P + +YN L++  C  G  + A  L   ME   +  DV TYN  I+    
Sbjct: 198 LTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCR 257

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + RS + + ++ ++    I PN V++N +I  + KEGKI  A ++   M E   SP+ +T
Sbjct: 258 NSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLIT 317

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI+  C  GN EEA R++DVM    ++ N +T+ T+L+ L    K D A  +L   S
Sbjct: 318 YNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYS 377

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                L+ +S+  +I G  R+   + A +L  EM +  + P   T++ +I G  + G   
Sbjct: 378 INRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLN 437

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A ++++++ + G +P+   F+T+I+  C  G V + ++F+  M       D  TCN L+
Sbjct: 438 KAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLV 497

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC  G L +A +F       G   +SVT++ +I+          AF +  +M      
Sbjct: 498 ASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHH 557

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P  +TY ++   L +     EA+K    +       H +        P  +D  +ISY+ 
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEARKLLKKL-------HCI--------PLAVD--TISYNT 600

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            I E    G   +A+++FEE  Q  I  +  TY  +++GLI+  + +   +
Sbjct: 601 LIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFI 651



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 241/540 (44%), Gaps = 23/540 (4%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            DN T N+++ +L + GKL E  + L  + + GLVPN  T++ +++GY  +G    A  V 
Sbjct: 489  DNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVF 548

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            D M      P  +TY  L+   C      EA +L K++  + L  D ++YNTLI    +S
Sbjct: 549  DKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKS 608

Query: 129  GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV---RNMEENGFSPDC 185
            G  +EA +L +E+ ++ I P++ T+  ++    +EG++   C  +   R M++   + + 
Sbjct: 609  GNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL--VCAFIFLGRLMQKEILTLNS 666

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            + Y   ID   KAG  + A  +   M  KGL ++ I LN+I        K+  A  L++ 
Sbjct: 667  IVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK 726

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               +    +  ++  L+ GY R +      KL++ M+     P+  TY+++I GL   G 
Sbjct: 727  TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGM 786

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             E  I ML   +      D+ TFN +I   C    ++K +   + M       D  T   
Sbjct: 787  LELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKA 846

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            +   L R  + +    F    + KG    S  Y T++  +C+   ++ AF L  +M    
Sbjct: 847  VTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALG 906

Query: 426  LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN---------HQVVQPNTSKTPE 476
            +  D     A+   L   G++EEA      M+   KI          H   + +  K   
Sbjct: 907  ISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAH 966

Query: 477  ---------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                      +    ++Y+  I+  C+ G    AL  +EE +QKG+  N +TY  L++ +
Sbjct: 967  NLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 207/445 (46%), Gaps = 17/445 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            +++LI  +   GM+  A      M      P V T N ++    ++ R+   +    ++
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQM 166

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
               + PN  + NI+I   C +GK+ KA  I+  ME NG+ P  V+YNTL+   CK G  
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A  ++  M  KG++ +  T N  + +LC   +  + Y++L     +    +EVSY TL
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G+ ++ K   A ++++EM E  + P+  TYN +I G   +G  E+A+ +L+ +  + +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDV 346

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+E T  T+++G     + + A     +        + ++  +++ GLCR G+L++A +
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQ 406

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                   G   D +T++ LI+  CK   L  A  ++S++  +   P+   ++ +     
Sbjct: 407 LLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSC 466

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           + G + E  KF + M   G+                 +  + + +  +   C  G+  +A
Sbjct: 467 KVGNVYEGMKFYAAMNLNGQ-----------------NADNFTCNSLVASLCENGKLVEA 509

Query: 502 LQIFEETRQKGIAINKSTYMNLMNG 526
            +      + G+  N  T+  ++NG
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIING 534



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 202/460 (43%), Gaps = 39/460 (8%)

Query: 6    CLP---DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            C+P   D ++YNT++  + K G L E   L  +M +  ++P+  TY  ++SG  + G L 
Sbjct: 588  CIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLV 647

Query: 63   EAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A   +  + Q + L  +   Y   I+G   AG  + A  L KEME   L  D++  N++
Sbjct: 648  CAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSI 707

Query: 122  INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
             + +   G+   A  LI +     + PN  T NI++  Y +   I    K+   M  +GF
Sbjct: 708  TDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGF 767

Query: 182  SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-- 239
             P+ +TY++LI   C  G +E   +M+ +   +   ++ +T N ++   C    LD+   
Sbjct: 768  FPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVID 827

Query: 240  ---------------------------------YMLLNSASKRGYYLDEVSYGTLITGYF 266
                                             ++ ++   K+G+      Y T++    
Sbjct: 828  LTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMC 887

Query: 267  RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
            R      A KL D+M    I        AM+ GL+  GK E+A+ +L  +L+   IP  +
Sbjct: 888  RVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS 947

Query: 327  TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            TF T++H FC +   ++A      M     K DIV  N+L+S  C  G +  AL F+   
Sbjct: 948  TFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 387  ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
              KG   +  TY  L+S++  +  +     +L ++ ++ L
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL 1047



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 35/357 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G   D +  N+I D   + GK+     L+S  + + ++PN TT+NIL+ GY +   
Sbjct: 692  MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQD 751

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +    ++ +LM ++   P+  TY+ LI G CN GMLE   ++ K   +     D +T+N 
Sbjct: 752  IMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNM 811

Query: 121  LI---------NRFFESGRSMEAFKL--------------------------IDELDEHG 145
            LI         ++  +   +ME F++                          + E+ + G
Sbjct: 812  LIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKG 871

Query: 146  IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
              P +  +  M+K  C+ G I  A K+   M   G S D      ++      G +EEA 
Sbjct: 872  FIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAM 931

Query: 206  RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
             ++  M R      T T  T++H  C +    EA+ L          LD V+Y  LI+  
Sbjct: 932  WILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISAC 991

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
              +     AL  ++E+K++ ++P+  TY  ++  +S      +   +L +L   G++
Sbjct: 992  CANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 18/299 (6%)

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG+     +   ++    ++ +A+     + +M   ++ P+  ++N +I  L   GK ++
Sbjct: 134 RGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKK 193

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++L  + ++G +P   ++NT++   C +G+ + AL   + M  K  + D+ T N+ + 
Sbjct: 194 AVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFID 253

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LCR     +     +    K    + V+YNTLI+   KE ++  A  + +EM E  L P
Sbjct: 254 SLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSP 313

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIM---------VETGKINHQVVQPNTSKTPEEI- 478
           +  TY  +      +G  EEA +   +M         V  G + + + +         I 
Sbjct: 314 NLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373

Query: 479 --------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     + IS++  I+  C  G   +A Q+  E  + G+  +  T+  L+NG  K
Sbjct: 374 ERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCK 432


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 156/577 (27%), Positives = 277/577 (48%), Gaps = 51/577 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           F   PD  T+   + +  + G+L+   + + +M K G+ P   T+ +L+    K G + E
Sbjct: 281 FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDE 340

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A +  + M   +  P+V TY  L+NG   AG LEEA  +  EM+     PD + YNTLI+
Sbjct: 341 ACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLID 400

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G +  A  L  E+ + G+ PN  T+NIMI    K G+  +A ++  +++E G  P
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVP 460

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK-------------------------- 217
           D  TYNTLID   K G M++   ++  M  KG +                          
Sbjct: 461 DVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPS 520

Query: 218 -----MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
                +  IT NT++        +DEA  LL    K       V+Y TL+ G  +  + +
Sbjct: 521 LGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLD 580

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A+ L  EM+++   PS  TY++++    +  + E+++ + +E+++ G + D +T++ +I
Sbjct: 581 EAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVI 640

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +  C    V++AL    +M E+  +P +     LLS L ++  ++ AL+ F         
Sbjct: 641 NCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLV 700

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA--- 449
            D+  YN +++ L K  R+++A  L+  M+ + + PD +TY ++   L +SGRLEEA   
Sbjct: 701 PDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNM 760

Query: 450 -------------QKFTSIM---VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
                          +TS+M    + GK++H ++    +   +   P  ++YS  I+   
Sbjct: 761 FTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR-AMAKKRCVPDVVTYSSLIDSLG 819

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +GR ++A   FE +  KG   N   Y +L++   K+
Sbjct: 820 KEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKK 856



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 149/578 (25%), Positives = 282/578 (48%), Gaps = 49/578 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FGC P    YN +L+ L K G  +    +   + +  + P+  T+ I V  + + G 
Sbjct: 243 MKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A   +  M ++   P V T+ +LI+    +G ++EA +    M++L+  P+VVTY T
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   ++GR  EA ++  E+ E+   P+A+ +N +I    K G+ D AC + + M++ G
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRG 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN +I    KAG   EA+++   +  +G   +  T NT++  L    ++D+  
Sbjct: 423 LVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVL 482

Query: 241 MLLNSASKRG-------------------------------YYLDEVSYGTLITGYFRDE 269
            ++    ++G                                 L E++Y TL++ +  + 
Sbjct: 483 AIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNG 542

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             + A+KL + MK+ + +P+  TY  ++ GL ++G+ ++A+ +L E+ + G  P   T++
Sbjct: 543 HVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYS 602

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           +++  F    Q E++L   ++MV K    D+ T +++++ LC+   +++AL  F     +
Sbjct: 603 SLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G       Y TL+SSL K+ +++ A  + +E++E  L PD + Y  +   LV+S R++EA
Sbjct: 663 GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722

Query: 450 QK----------------FTSIMVETGKINH--QVVQPNTSKTPEEIDPSSISYSEKINE 491
            K                +TS++   GK     +     T  T E  +P  ++Y+  ++ 
Sbjct: 723 CKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDV 782

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               G+   AL IF    +K    +  TY +L++ L K
Sbjct: 783 LGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGK 820



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 241/462 (52%), Gaps = 35/462 (7%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            C+P  VTY T++D L K G+L+E   LL +M+KQG  P+  TY+ L++ + K    +E++
Sbjct: 559  CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESL 618

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             + D M +   + DV TY+++IN  C +  +++A  +   M+   + P +  Y TL++  
Sbjct: 619  SLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +  +   A ++ +EL E  + P+   +NIM+    K  ++D+ACK+V +M+     PD 
Sbjct: 679  VKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDL 738

Query: 186  VTYNTLIDANCKAGNMEEAFRM-------------------MDVMGRKG----------- 215
             TY +L+D   K+G +EEAF M                   MDV+G+ G           
Sbjct: 739  FTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRA 798

Query: 216  -----LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
                    + +T ++++ +L  E +++EAY    ++  +G   +   Y +LI  + +   
Sbjct: 799  MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858

Query: 271  ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
             +RAL+L++EM+ RQ  P+  TYN ++ GL+++G+   A  +L E+ + G +PD  T+N 
Sbjct: 859  VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918

Query: 331  IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
            +I G    G V++A  +  +M EK   PD++T   L+  L +   L +A + F S   +G
Sbjct: 919  LIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978

Query: 391  KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
                 VTYN LI  L +  ++ +A  +  EM+ K   PD  T
Sbjct: 979  YNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 158/596 (26%), Positives = 284/596 (47%), Gaps = 88/596 (14%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG---LV--------------PNRT- 46
            G +PD  TYNT++D L K G++++V  ++ +M ++G   ++               +RT 
Sbjct: 457  GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTV 516

Query: 47   -------------TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA 93
                         TYN L+S +   G + EA++++++M +++ +P V TY  L++G   A
Sbjct: 517  EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKA 576

Query: 94   GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
            G L+EA  L +EME     P VVTY++L+  F++  +  E+  L DE+   G   +  T+
Sbjct: 577  GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTY 636

Query: 154  NIMIKWYCK----------------EG-------------------KIDKACKIVRNMEE 178
            +++I   CK                EG                   KID A +I   ++E
Sbjct: 637  SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE 696

Query: 179  NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            +   PD   YN +++   K+  ++EA +++D M  + +  +  T  ++L  L    +L+E
Sbjct: 697  SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEE 756

Query: 239  AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            A+ +    ++ G+  D V+Y +L+    +  K + AL ++  M +++ +P   TY+++I 
Sbjct: 757  AFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLID 816

Query: 299  GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
             L + G+ E+A       +  G  P+   ++++I  F  +G V++AL+   +M  +   P
Sbjct: 817  SLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPP 876

Query: 359  DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            +IVT N LLSGL + G L  A K        G   D VTYN LI  + K   +++A    
Sbjct: 877  NIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYF 936

Query: 419  SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
              M+EK + PD  T+ ++  +L +  +L EA +    M E G                  
Sbjct: 937  KRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG-----------------Y 979

Query: 479  DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            +PS ++Y+  I+     G+  +A  IF E + KG   +  T      G++KR  S+
Sbjct: 980  NPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITI-----GIMKRILSV 1030



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 221/441 (50%), Gaps = 22/441 (4%)

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           A  +  +M+S    P    YN ++    + G    A  +  +L +  I+P+A T  I + 
Sbjct: 236 ALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVH 295

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
            + + G++D A + ++ M ++G  P   T+  LIDA  K+GN++EA +  + M       
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSP 355

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N +T  T+++ L    +L+EA  +     +     D ++Y TLI G  +  +A+ A  L+
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            EMK+R ++P+  TYN MI  L ++G+  +A  + ++L + G +PD  T+NT+I      
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           GQ++K L    +MVEK  +  I++ +   S    EG +E A +      L  K++  +TY
Sbjct: 476 GQMDKVLAIIKEMVEKGGEC-IISRD---SNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           NTL+S+      +++A  LL  M++ +  P   TY  +   L ++GRL+EA      M +
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                  +PS ++YS  +     + + +++L +F+E  +KG   + S
Sbjct: 592 QG-----------------CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS 634

Query: 519 TYMNLMNGLIKRRKSISKAVD 539
           TY  ++N L K    + +A+D
Sbjct: 635 TYSLVINCLCK-SDDVDQALD 654



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/447 (21%), Positives = 190/447 (42%), Gaps = 48/447 (10%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TY  +I R   +  +    +++  + + G + +      +++ +     +  A +I  
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M+  G +P    YN +++   K G    A  +   +G+  ++ +  T    +H+     
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +LD A   +    K G      ++  LI    +    + A K ++ MK  +  P+  TY 
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYT 361

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ GL+++G+ E+A ++  E+ ++   PD   +NT+I G    G+ + A     +M ++
Sbjct: 362 TLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P++ T NI++S L + G   +A + F     +G   D  TYNTLI  L K  +++  
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481

Query: 415 FGLLSEMEEKK-----------------LGPDR--------------YTYAAIHTALVES 443
             ++ EM EK                   G DR               TY  + +A + +
Sbjct: 482 LAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHN 541

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G ++EA K   +M +     H+ +            P+ ++Y+  ++     GR  +A+ 
Sbjct: 542 GHVDEAVKLLEVMKK-----HECI------------PTVVTYTTLVDGLGKAGRLDEAVS 584

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKR 530
           +  E  ++G   +  TY +LM    KR
Sbjct: 585 LLREMEKQGCEPSVVTYSSLMASFYKR 611



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 17/336 (5%)

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +++G+S    TY  +I     A   +   +++  M ++G +++   L ++L T      +
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
             A  + N     G       Y  ++    +    + A+ ++ ++ + +I P   T+   
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +   ++SG+ + A + + E+++SG+ P   TF  +I      G +++A +F N M     
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P++VT   L++GL + G LE+A + F        + D++ YNTLI  L K    + A G
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           L  EM+++ L P+  TY  + + L ++GR  EA +    + E G +              
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV-------------- 459

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              P   +Y+  I+     G+    L I +E  +KG
Sbjct: 460 ---PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 259/522 (49%), Gaps = 17/522 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T + +++   +  KL+     +  + K G  P+  T++ L++G C  G + EA+ +VD M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    P + T N L+NG C  G + +A  L   M      P+ VTY  ++    +SG++
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A +L+ +++E  IK +AV ++I+I   CK+G +D A  +   ME  GF  D + Y TL
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C AG  ++  +++  M ++ +  + +  + ++     E KL EA  L     +RG 
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V+Y +LI G+ ++ + ++A  + D M  +   P+  T+N +I G  ++   +  ++
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  ++   G++ D  T+NT+I GFC  G++E A +   +MV +  +PDIV+  ILL GLC
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G  EKAL+ F         +D   YN +I  +C   +++DA+ L   +  K + PD  
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   L + G L EA      M E G                   P+  +Y+  I  
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGH-----------------SPNGCTYNILIRA 571

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           H  +G    + ++ EE ++ G +++ ST    ++ L +  K+
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKA 613



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 265/528 (50%), Gaps = 7/528 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT++T+++ L  +G+++E  +L+  M + G  P   T N LV+G C  G + +A+ +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +    P+  TY  ++   C +G    A  L ++ME  K+  D V Y+ +I+   +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    AF L +E++  G K + + +  +I+ +C  G+ D   K++R+M +   +PD V 
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++ LID   K G + EA  +   M ++G+  +T+T  +++   C E +LD+A  +L+   
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   +  ++  LI GY +    +  L+L+ +M  R ++  T TYN +I G  + GK E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++  E++   + PD  ++  ++ G C  G+ EKAL+   K+ +   + DI   NI++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G+C    ++ A   F S  LKG   D  TYN +I  LCK+  L +A  L  +MEE    
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPEEI----DPSS 482
           P+  TY  +  A +  G   ++ K    +   G  ++   ++   S     +    +P  
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDV 619

Query: 483 ISYSEKINEHCSQ--GRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
            +++  +   C +      DA  +F+  +  G   N  TY  ++ GL+
Sbjct: 620 FTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLL 667



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 258/533 (48%), Gaps = 13/533 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +T N +++ L   GK+++   L+  M + G  PN  TY  ++   CK G    AM +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M + K   D   Y+++I+G C  G L+ AF L  EME      D++ Y TLI  F  
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +GR  +  KL+ ++ +  I P+ V  + +I  + KEGK+ +A ++ + M + G SPD VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +LID  CK   +++A  M+D+M  KG   N  T N +++  C    +D+   L    S
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            RG   D V+Y TLI G+    K   A +L+ EM  R++ P   +Y  ++ GL  +G+ E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++  ++ +S M  D   +N IIHG C+  +V+ A      +  K  KPD+ T NI++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC++G L +A   FR     G + +  TYN LI +   E     +  L+ E++     
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS--KTPEEI------- 478
            D  T   +  AL    R+ +A     +   T  +    ++ N S    P          
Sbjct: 595 VDAST---LRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMG 651

Query: 479 -DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             P+ ++Y+  I    +         + ++  ++G   N  T    ++GL K+
Sbjct: 652 YKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 213/418 (50%), Gaps = 17/418 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V ++ ++D   K+GKL E  +L  +M ++G+ P+  TY  L+ G+CK   L +A  +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +DLM      P++ T+N+LING+C A ++++   L ++M    ++ D VTYNTLI  F E
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+   A +L  E+    ++P+ V++ I++   C  G+ +KA +I   +E++    D   
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   C A  +++A+ +   +  KG+K +  T N ++  LC +  L EA +L     
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G+  +  +Y  LI  +  +  A ++ KL +E+K                G S    T 
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR--------------CGFSVDASTL 600

Query: 308 Q-AIDMLNELLQSGMIPDETTFNTIIHGFCSE--GQVEKALQFHNKMVEKSFKPDIVTCN 364
           + A+  L  +L++G  PD  TF T++  FC E    V  A      M    +KP++VT N
Sbjct: 601 RFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYN 660

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            ++ GL    ++ +          +G   ++VT +T IS LCK+     A  LL +ME
Sbjct: 661 TVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 218/470 (46%), Gaps = 17/470 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ +   MT+++  P +  ++ L +        +    L K+ME   +  ++ T + +I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N      +   AF  + ++ + G +P+ VT + +I   C EG++ +A ++V  M E G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P  +T N L++  C  G + +A  ++D M   G + N +T   +L  +C   +   A  L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L    +R   LD V Y  +I G  +D   + A  L++EM+ +        Y  +I G   
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G+ +    +L ++++  + PD   F+ +I  F  EG++ +A + H +M+++   PD VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ G C+E  L+KA       + KG   +  T+N LI+  CK   ++D   L  +M 
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + +  D  TY  +     E G+LE A++    MV                    + P  
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS-----------------RRVRPDI 457

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +SY   ++  C  G  + AL+IFE+  +  + ++   Y  +++G+    K
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 175/365 (47%), Gaps = 17/365 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K D A  + + M  +   P  + ++ L     +    +    +   M  KG+  N  TL+
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C  +KL  A+  +    K GY  D V++ TLI G   + + + AL+L D M E 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+  T NA++ GL  +GK   A+ +++ ++++G  P+E T+  ++   C  GQ   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           ++   KM E+  K D V  +I++ GLC++G L+ A   F    +KG   D + Y TLI  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            C   R +D   LL +M ++K+ PD   ++A+    V+ G+L EA++    M++ G    
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG---- 347

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        I P +++Y+  I+  C + +   A  + +    KG   N  T+  L+
Sbjct: 348 -------------ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394

Query: 525 NGLIK 529
           NG  K
Sbjct: 395 NGYCK 399



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 17/273 (6%)

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
           +VSY   +     D K + A+ L+ EM   +  P    ++ +   ++++ + +  +D+  
Sbjct: 37  KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           ++   G+  +  T + +I+  C   ++  A     K+++  ++PD VT + L++GLC EG
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            + +AL+     +  G     +T N L++ LC   ++ DA  L+  M E    P+  TY 
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   + +SG+   A +    M E                  +I   ++ YS  I+  C 
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEE-----------------RKIKLDAVKYSIIIDGLCK 259

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            G   +A  +F E   KG   +   Y  L+ G 
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 26/200 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG----- 59
           G  PD  TYN ++  L KKG L+E   L   M++ G  PN  TYNIL+  +   G     
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581

Query: 60  -----------------WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC---NAGMLEEA 99
                             L+ A+  +  M +    PDV+T+  L+  +C   NA + + A
Sbjct: 582 AKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYD-A 640

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
             L K M+++   P+VVTYNT+I          +   ++D++ E G +PNAVT +  I  
Sbjct: 641 PTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700

Query: 160 YCKEGKIDKACKIVRNMEEN 179
            CK+     A  ++R ME +
Sbjct: 701 LCKQDLHGSAILLLRKMEND 720


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 264/525 (50%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  + YN IL  L KK ++ E   +  +MK+   VPN  TYNIL+   C+ G L  A
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAA 423

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + D M +    P+V T N++I+  C A  LEEA  + + M+     P+ VT+++LI+ 
Sbjct: 424 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A+ L +++ + G  P A+ +  +I+ + K G+ +   KI + M   G SPD
Sbjct: 484 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG  E+   +   +   G   +  + + ++H L      +E Y L  
Sbjct: 544 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 603

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G  LD  +Y  +I G+ +  K N+A +L +EMK +   P+  TY ++I GL++  
Sbjct: 604 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 663

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E   +G+  +   ++++I GF   G++++A     ++++K   P++ T N
Sbjct: 664 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        + +TY+ LI+ LC+ R+   AF    EM++ 
Sbjct: 724 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 783

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY  + + L ++G + EA    S     G I                 P S S
Sbjct: 784 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI-----------------PDSAS 826

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    S  +  DA  +FEETR KG  I+  T + L++ L K
Sbjct: 827 YNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 871



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 266/556 (47%), Gaps = 53/556 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V YN  +D   K GK++       +MK  GL+P+  TY  ++   CK   L EA+ + 
Sbjct: 264 DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELF 323

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + + QN+ +P  + YN +I G+ +AG  +EA+ L +  ++   +P V+ YN ++    + 
Sbjct: 324 EQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKK 383

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  EA ++ +E+    + PN  T+NI+I   C+EGK++ A +I  +ME  G  P+ +T 
Sbjct: 384 RRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTV 442

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N +ID  CKA  +EEA  + + M  K    N +T ++++  L    ++D+AY L      
Sbjct: 443 NIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD 502

Query: 249 RGYYLDEVSYGTLITGYF---RDEKANRALK----------------------------- 276
            G+    + Y +LI  +F   R E  ++  K                             
Sbjct: 503 CGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEK 562

Query: 277 ---LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
              L+ E+     +P   +Y+ +I GL ++G   +  ++   + + G + D   +N +I 
Sbjct: 563 GRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 622

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           GFC  G+V KA Q   +M  K   P +VT   ++ GL +   L++A   F      G  +
Sbjct: 623 GFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKL 682

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           + V Y++LI    K  R+++A+ ++ E+ +K L P+ YT+  +  ALV++  + EA    
Sbjct: 683 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 742

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M +              K P    P+ I+YS  IN  C   ++  A   ++E ++ G+
Sbjct: 743 QSMKDL-------------KCP----PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGL 785

Query: 514 AINKSTYMNLMNGLIK 529
             N  TY  +++GL K
Sbjct: 786 KPNTITYTTMISGLAK 801



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 239/493 (48%), Gaps = 35/493 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+  TYN ++D L ++GKLN   ++  DM++ GL PN  T NI++   CK   L+EA  
Sbjct: 401 VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACS 460

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M      P+  T++ LI+G    G +++A+ L ++M     +P  + Y +LI  FF
Sbjct: 461 IFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFF 520

Query: 127 ESGRSMEAFK-----------------------------------LIDELDEHGIKPNAV 151
           + GR  +  K                                   L  E++ HG  P+A 
Sbjct: 521 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR 580

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           +++I+I    K G  ++  ++   M+E G   D   YN +ID  CK+G + +A+++++ M
Sbjct: 581 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 640

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG     +T  +++  L    +LDEAYML   A   G  L+ V Y +LI G+ +  + 
Sbjct: 641 KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRI 700

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A  + +E+ ++ + P+ +T+N ++  L ++ +  +A+     +      P++ T++ +
Sbjct: 701 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 760

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G C   +  KA  F  +M +   KP+ +T   ++SGL + G + +A   F  +   G 
Sbjct: 761 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 820

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             DS +YN +I  L    +  DA+ L  E   K       T   +  AL ++  LE+A  
Sbjct: 821 IPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAI 880

Query: 452 FTSIMVETGKINH 464
             +++ ET K  H
Sbjct: 881 VGAVLKETAKSQH 893



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 251/546 (45%), Gaps = 57/546 (10%)

Query: 24  GKLNEVRD------LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL 77
           G L+EVR+      L   M++ G   N   +  L+  + + G +  A+ ++D M  N   
Sbjct: 203 GALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLD 262

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
            D+  YN+ I+ +  AG ++ +++   EM+S  L+PD VTY ++I    ++ R  EA +L
Sbjct: 263 ADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVEL 322

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP-----DCV------ 186
            ++L+++   P A  +N MI  Y   GK D+A  ++   +  G  P     +C+      
Sbjct: 323 FEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGK 382

Query: 187 -----------------------TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
                                  TYN LID  C+ G +  A  + D M R GL  N +T+
Sbjct: 383 KRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTV 442

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           N ++  LC  +KL+EA  +      +    + V++ +LI G  +  + + A  L+++M +
Sbjct: 443 NIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD 502

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
              +P    Y ++I    + G+ E    +  E++ +G  PD T  NT +      G+ EK
Sbjct: 503 CGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEK 562

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
                 ++    F PD  + +IL+ GL + G+  +  + F +   +G  +D+  YN +I 
Sbjct: 563 GRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 622

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
             CK  ++  A+ LL EM+ K   P   TY ++   L +  RL+EA     ++ E  K N
Sbjct: 623 GFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY----MLFEEAKSN 678

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I  + + YS  I+     GR  +A  I EE  QKG+  N  T+  L
Sbjct: 679 G-------------IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 725

Query: 524 MNGLIK 529
           ++ L+K
Sbjct: 726 LDALVK 731



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 241/536 (44%), Gaps = 19/536 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YN++L  + +  + + +  +L +M   G  P+      LV+   K   L+EA  ++  M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y +LI         +    L  +M+ L    +V  + TLI  F   GR 
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+  + +  + V +N+ I  + K GK+D + K    M+ +G  PD VTY ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CKA  ++EA  + + + +          NT++       K DEAY LL     +G 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               ++Y  ++T   +  +   AL++++EMK R  +P+  TYN +I  L + GK   A++
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALE 425

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++ ++G+ P+  T N +I   C   ++E+A      M +K   P+ VT + L+ GL 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G ++ A   +   +  G    ++ Y +LI S  K  R ED   +  EM      PD  
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKIN---------HQVVQPNTSKTPEEIDPS- 481
                   + ++G  E+ +     +   G I          H +V+   +    E+  + 
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605

Query: 482 --------SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + +Y+  I+  C  G+   A Q+ EE + KG      TY ++++GL K
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 661



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/276 (19%), Positives = 115/276 (41%), Gaps = 17/276 (6%)

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y +L+    R+ + +   ++ +EM      PS+     ++    +S K  +A D++  +
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            +    P  + +  +I       + +  L   ++M E  ++ ++     L+    REG +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + AL             D V YN  I    K  +++ ++    EM+   L PD  TY ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L ++ RL+EA +    + +  K+                 P + +Y+  I  + S G
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKV-----------------PCAYAYNTMIMGYGSAG 349

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++ +A  + E  + KG   +   Y  ++  L K+R+
Sbjct: 350 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRR 385


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 260/521 (49%), Gaps = 18/521 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT+++  F +GK+N  R + + M +Q LVP+  TY  ++ GYC+   + +A+ V
Sbjct: 257 PDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSV 316

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M     +P   TY+ L+NG+C   ML  A  L  +++S  +  +      LI+ F +
Sbjct: 317 LSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQ 376

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A +++  + E GI P+ VT++ +I   C+  K+ +  +I+  M+++G  P+ V 
Sbjct: 377 VGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVL 436

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLI   CKAG ++ A +    + R+GL  N +  N +L     E  + EA       S
Sbjct: 437 YTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMS 496

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     + VS+  +I  Y    K   A  ++D+M      P+  TY  ++ GL Q G   
Sbjct: 497 RMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLV 556

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA   +  LL      DE TFN ++ G C  G +++AL    KMV+ +  PDI T  ILL
Sbjct: 557 QAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILL 616

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-L 426
           SG CR+G +  AL   +  + KG   D+V Y  L++ L  E +++ A  +  E+  K+ L
Sbjct: 617 SGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGL 676

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D   Y ++    ++ G +   ++  S M +                  E+ P+S SY+
Sbjct: 677 YADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQ-----------------NEVYPNSASYN 719

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ +  +G++  +L +++   +KGI  +  TY  L+ GL
Sbjct: 720 ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 760



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 255/557 (45%), Gaps = 54/557 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N +L++L   G+  +  D+L  MK   L  N  TYN ++  Y K G  K A+ V+
Sbjct: 154 DVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCL-SNSATYNTILHWYVKKGRFKAALCVL 212

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M ++    D++TYN++I+  C       AF L K M    L PD  TYNTLIN FF  
Sbjct: 213 EDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGE 272

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+   A  + + +    + P+  T+  MI  YC+  +IDKA  ++  ME  G  P  +TY
Sbjct: 273 GKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTY 332

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           + L++  CK   +  A  +M  +  +G+ +N      ++   C   ++ +A  +L S  +
Sbjct: 333 SALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLE 392

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+Y  LI G  R  K +   ++   M++  I+P+   Y  +I    ++G  + 
Sbjct: 393 DGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKV 452

Query: 309 AIDMLNELLQSGMIP-----------------------------------DETTFNTIIH 333
           A+    ++ + G++                                    +  +FN II 
Sbjct: 453 ALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIID 512

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            +C  G++ +A   ++ MV     P++ T   LL GLC+ G L +A +F    +    AV
Sbjct: 513 SYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAV 572

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D  T+N L+  +CK   L++A  +  +M +    PD +TY  + +     G++  A    
Sbjct: 573 DEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVML 632

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK-G 512
            +M+E G +                 P +++Y+  +N   ++G+ K A  +F+E   K G
Sbjct: 633 QMMLEKGVV-----------------PDTVAYTCLLNGLINEGQVKAASYVFQEIICKEG 675

Query: 513 IAINKSTYMNLMNGLIK 529
           +  +   Y +LMNG +K
Sbjct: 676 LYADCIAYNSLMNGYLK 692



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 256/535 (47%), Gaps = 26/535 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  +TY+ +L+   K   L    DL+ D+K +G+  N+T   IL+ G+C++G 
Sbjct: 320 MEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGE 379

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A +++  M ++   PDV TY+ LING C    + E   +   M+   +LP+ V Y T
Sbjct: 380 ISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTT 439

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + ++G    A K   ++   G+  N V HN +++ + +EG I +A    + M    
Sbjct: 440 LICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMN 499

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA- 239
            S + V++N +ID+ C  G + EAF + D M R G   N  T   +L  LC    L +A 
Sbjct: 500 ISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAK 559

Query: 240 ---YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
              + LL+  S     +DE ++  L+ G  +    + AL + ++M +   +P   TY  +
Sbjct: 560 QFMFCLLDIPSA----VDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTIL 615

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA-LQFHNKMVEKS 355
           + G  + GK   A+ ML  +L+ G++PD   +  +++G  +EGQV+ A   F   + ++ 
Sbjct: 616 LSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEG 675

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
              D +  N L++G  + G +    +            +S +YN L+    K  +   + 
Sbjct: 676 LYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSL 735

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            L   M  K + PD  TY  +   L E G ++ A KF   MV  G    ++V        
Sbjct: 736 YLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLV-------- 787

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              D    S+SEK   H       +AL++F   +   ++ +  T+  ++NGLI++
Sbjct: 788 --FDILITSFSEKSKMH-------NALRLFNCMKCLHLSPSSKTFSAMINGLIRK 833



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 240/498 (48%), Gaps = 36/498 (7%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +G  P+  TY  +L  L + G L + +  +  +       +  T+N L+ G CK G 
Sbjct: 530  MVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGT 589

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA+ + + M +N  LPD+ TY +L++G+C  G +  A  + + M    ++PD V Y  
Sbjct: 590  LDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTC 649

Query: 121  LINRFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            L+N     G+   A  +  E+  + G+  + + +N ++  Y K G ++   +++ +M +N
Sbjct: 650  LLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQN 709

Query: 180  GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
               P+  +YN L+    K G   ++  +   M RKG++ + +T   ++  L     +D A
Sbjct: 710  EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIA 769

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
               L      G + D++ +  LIT +    K + AL+L++ MK   + PS+ T++AMI G
Sbjct: 770  VKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMING 829

Query: 300  LSQSGKTEQAIDMLNELLQSGMIPDETTF------------------------------- 328
            L +    +Q+ ++L+E+LQ G+ P+ T +                               
Sbjct: 830  LIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPA 889

Query: 329  ----NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
                ++II G C  G++E+A+   + M+     P + T   L+  LC+E  +  AL   R
Sbjct: 890  EVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKR 949

Query: 385  SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               L    VD V+YN LI+ LCK++ + DA  L  EM+ K L P+  TY  +  A+  +G
Sbjct: 950  LMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTG 1009

Query: 445  RLEEAQKFTSIMVETGKI 462
            R++  ++    + E G I
Sbjct: 1010 RMQNGEELLEDIEERGLI 1027



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 144/609 (23%), Positives = 266/609 (43%), Gaps = 89/609 (14%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            PD VTY+ +++ + +  K++E +++LS M+K G++PN   Y  L+  YCK G++K A++ 
Sbjct: 397  PDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKH 456

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
               + +   + +   +N L+  +   GM+ EA   R+ M  + +  + V++N +I+ +  
Sbjct: 457  FVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCH 516

Query: 128  SGRSMEAFKLIDELDEHGIKPNAVTH---------------------------------- 153
             G+ +EAF + D++  +G  PN  T+                                  
Sbjct: 517  RGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKT 576

Query: 154  -NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
             N ++   CK G +D+A  I   M +N   PD  TY  L+   C+ G +  A  M+ +M 
Sbjct: 577  FNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMML 636

Query: 213  RKGLKMNTITLNTILHTLCCEKKLDEA-YMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG+  +T+    +L+ L  E ++  A Y+      K G Y D ++Y +L+ GY +    
Sbjct: 637  EKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNV 696

Query: 272  N-----------------------------------RALKLWDEMKERQIMPSTFTYNAM 296
            N                                   ++L L+  M  + I P   TY  +
Sbjct: 697  NTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLL 756

Query: 297  IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            I GLS+ G  + A+  L +++  G+ PD+  F+ +I  F  + ++  AL+  N M     
Sbjct: 757  ILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHL 816

Query: 357  KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
             P   T + +++GL R+  L+++ +     +  G   +   Y  L+++ C+   ++ AF 
Sbjct: 817  SPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFR 876

Query: 417  LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI----NHQVVQPNTS 472
            L  EM+   + P     ++I   L   G+LEEA    S M+ +G +        +  +  
Sbjct: 877  LKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLC 936

Query: 473  KTPEEIDP--------------SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            K  +  D                 +SY+  I   C      DAL ++ E + KG+  N +
Sbjct: 937  KESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVT 996

Query: 519  TYMNLMNGL 527
            TY+ L   +
Sbjct: 997  TYITLTGAM 1005



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 220/424 (51%), Gaps = 1/424 (0%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            CLPD  TY  +L    +KGK+     +L  M ++G+VP+   Y  L++G    G +K A 
Sbjct: 605  CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 664

Query: 66   RVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V  +++ +     D   YN L+NG+   G +    R+  +M   ++ P+  +YN L++ 
Sbjct: 665  YVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHG 724

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            + + G+  ++  L   +   GI+P+ VT+ ++I    + G ID A K +  M   G  PD
Sbjct: 725  YVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 784

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             + ++ LI +  +   M  A R+ + M    L  ++ T + +++ L  +  LD+++ +L+
Sbjct: 785  KLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLH 844

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               + G   +   Y  L+    R  + +RA +L +EMK   I+P+    +++I GL + G
Sbjct: 845  EMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCG 904

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            K E+A+ + + +++SGM+P   TF T++H  C E ++  AL     M     K D+V+ N
Sbjct: 905  KLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYN 964

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +L++GLC++  +  AL  +     KG   +  TY TL  ++    R+++   LL ++EE+
Sbjct: 965  VLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEER 1024

Query: 425  KLGP 428
             L P
Sbjct: 1025 GLIP 1028



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 170/354 (48%), Gaps = 35/354 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G   D + YN++++   K G +N ++ ++SDM +  + PN  +YNIL+ GY K G   ++
Sbjct: 675  GLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 734

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + +   M +    PD  TY +LI G    G+++ A +  ++M    + PD + ++ LI  
Sbjct: 735  LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITS 794

Query: 125  FFESGRSMEAFKLID-----------------------------------ELDEHGIKPN 149
            F E  +   A +L +                                   E+ + G++PN
Sbjct: 795  FSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPN 854

Query: 150  AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
               +  ++   C+ G+ID+A ++   M+  G  P  V  +++I   C+ G +EEA  +  
Sbjct: 855  HTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFS 914

Query: 210  VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
             M R G+     T  T++H+LC E K+ +A  L          +D VSY  LITG  +D+
Sbjct: 915  NMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDK 974

Query: 270  KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              + AL L+ EMK + + P+  TY  +   +  +G+ +   ++L ++ + G+IP
Sbjct: 975  HISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/499 (23%), Positives = 223/499 (44%), Gaps = 58/499 (11%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           ++ + G+    +     R+    +S     + V +  LI  + +  + ++A   +  +D+
Sbjct: 58  HLAVTGFSCTAIFTSLLRIISRFDS----TNHVVFELLIKAYVKERKVLDAAVAVFFMDD 113

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G K + V  N ++K   +EG+       +R      F  D  T N L+++ C  G   +
Sbjct: 114 CGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRK 173

Query: 204 AFRMMDVMGRKGLKMNTITLNTILH----------------------------------- 228
           A  M+  M    L  N+ T NTILH                                   
Sbjct: 174 AEDMLQKMKSCCLS-NSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMID 232

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC  K+   A++LL    K     DE +Y TLI G+F + K N A  +++ M  + ++P
Sbjct: 233 KLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVP 292

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S  TY  MI G  ++ + ++A+ +L+E+  +G++P E T++ +++G+C    +  AL   
Sbjct: 293 SVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLM 352

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             +  +    +   C IL+ G C+ G + KA +  +S +  G   D VTY+ LI+ +C+ 
Sbjct: 353 VDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRM 412

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            ++ +   +LS M++  + P+   Y  +     ++G ++ A K    +   G + + V+ 
Sbjct: 413 AKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIH 472

Query: 469 PNTSK--------TPEE----------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
               +        T  E          I  +S+S++  I+ +C +G+  +A  ++++  +
Sbjct: 473 NALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVR 532

Query: 511 KGIAINKSTYMNLMNGLIK 529
            G + N  TY NL+ GL +
Sbjct: 533 YGHSPNVCTYQNLLRGLCQ 551



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 143/285 (50%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PDNVTY  ++  L + G ++     L  M  +G+ P++  ++IL++ + +   +  A
Sbjct: 745  GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNA 804

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +R+ + M      P   T++ +ING      L+++  +  EM  + L P+   Y  L+N 
Sbjct: 805  LRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNA 864

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                G    AF+L +E+   GI P  V  + +I+  C+ GK+++A  +  NM  +G  P 
Sbjct: 865  KCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPT 924

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+ TL+ + CK   + +A  +  +M    LK++ ++ N ++  LC +K + +A  L  
Sbjct: 925  VATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYG 984

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
                +G + +  +Y TL    +   +     +L ++++ER ++P+
Sbjct: 985  EMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPA 1029



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 80/148 (54%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G +P  V  ++I+  L + GKL E   + S+M + G+VP   T+  L+   CK   
Sbjct: 881  MKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESK 940

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A+ +  LM   +   DV +YN+LI G C    + +A  L  EM+S  L P+V TY T
Sbjct: 941  IADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYIT 1000

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKP 148
            L    + +GR     +L+++++E G+ P
Sbjct: 1001 LTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 114/327 (34%), Gaps = 72/327 (22%)

Query: 274 ALKLWDEMKERQIMPS-TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI---------- 322
           ALK+ + + ER  +   T+ Y   +  L Q+    QA+ +L  L  +G            
Sbjct: 16  ALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLR 75

Query: 323 -------PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
                   +   F  +I  +  E +V  A      M +  FK   V CN +L  L  EG 
Sbjct: 76  IISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGE 135

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLC----------------------------- 406
            +    F R  + +   +D  T N L++SLC                             
Sbjct: 136 SKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTI 195

Query: 407 -----KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET-- 459
                K+ R + A  +L +ME   +  D YTY  +   L    R   A      M +   
Sbjct: 196 LHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDL 255

Query: 460 -----------------GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
                            GKINH     N     + + PS  +Y+  I+ +C   R   AL
Sbjct: 256 TPDECTYNTLINGFFGEGKINHARCVFN-HMLRQTLVPSVATYTTMIDGYCRNRRIDKAL 314

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
            +  E    G+  ++ TY  L+NG  K
Sbjct: 315 SVLSEMEITGVMPSELTYSALLNGYCK 341


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 263/531 (49%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +Y+ +L +L  +GK  +  DLL  M + G V  PN   YN ++ G+ K G +
Sbjct: 189 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 248

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD+ TYN +++  C A  +++A    ++M + ++LP+  TYN L
Sbjct: 249 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+  H I P+ VT ++++   CK GKI +A  +   M   G 
Sbjct: 309 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 368

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  +YN +++     G + +   + D+M   G+  +  T N ++        LD+A +
Sbjct: 369 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 428

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G   D V+Y T+I    R  K + A++ +++M ++ + P  + YN +I G  
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 488

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A ++++E++ +GM  D   F++II+  C  G+V  A    +  V     PD V
Sbjct: 489 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 548

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             ++L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 549 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++ + P    Y+ I   L ++GR   A+     M E+G                +I   
Sbjct: 609 LQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG-------------IAMDICTY 655

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +I         C    + +A+ +F+E R   + IN  T   +++G+ + R+
Sbjct: 656 NIVLRGLFKNRC----FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 702



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 252/529 (47%), Gaps = 72/529 (13%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C P+ V YNT++D  FK+G +N+  DL  +M ++G+ P+  TYN +V   CK   + 
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 284

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT----- 117
           +A   +  M   + LP+ WTYN LI G+ + G  +EA R+ KEM    +LPDVVT     
Sbjct: 285 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344

Query: 118 ------------------------------YNTLINRFFESGRSMEAFKLIDELDEHGIK 147
                                         YN ++N +   G  ++   L D +   GI 
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 404

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF-- 205
           P+  T N++IK Y   G +DKA  I   M ++G  PD VTY T+I A C+ G M++A   
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464

Query: 206 --RMMD-------------VMG------------------RKGLKMNTITLNTILHTLCC 232
             +M+D             + G                    G+ ++ +  ++I++ LC 
Sbjct: 465 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 524

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++ +A  + +     G + D V Y  L+ GY    K  +AL+++D M    I P+   
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKM 351
           Y  ++ G  + G+ ++ + +  E+LQ G+ P    ++ II G    G+ V   ++FH +M
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFH-EM 643

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            E     DI T NI+L GL +    ++A+  F+        ++ +T NT+I  + + RR+
Sbjct: 644 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 703

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           E+A  L + +   +L P+  TY+ + T L++ G +EEA+   S M   G
Sbjct: 704 EEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 254/530 (47%), Gaps = 20/530 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  N    N L+ G+C+     EA+ +
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++Y++L+   C+ G   +A  L + M     +  P+VV YNT+I+ 
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT+N ++   CK   +DKA   +R M      P+
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R  +  + +TL+ ++ +LC   K+ EA  + +
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  SY  ++ GY           L+D M    I P  +T+N +I   +  G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ PD  T+ T+I   C  G+++ A++  N+M+++   PD    N
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V ++++I++LCK  R+ DA  +       
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD   Y+ +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNVVV 584

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           Y   +N +C  GR  + L +F E  Q+GI  +   Y  +++GL +  +++
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 634



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 236/448 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD VT + ++ +L K GK+ E RD+   M  +G  P+  +YNI+++GY   G L +   
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + DLM  +   PD +T+N+LI  + N GML++A  +  EM    + PDVVTY T+I    
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+  +A +  +++ + G+ P+   +N +I+ +C  G + KA +++  +  NG   D V
Sbjct: 454 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 513

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            ++++I+  CK G + +A  + D+    GL  + +  + ++   C   K+++A  + ++ 
Sbjct: 514 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 573

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + V Y TL+ GY +  + +  L L+ EM +R I PST  Y+ +I GL Q+G+T
Sbjct: 574 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 633

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A    +E+ +SG+  D  T+N ++ G       ++A+    ++   + K +I+T N +
Sbjct: 634 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+ +   +E+A   F S        + VTY+ +I++L KE  +E+A  + S M+    
Sbjct: 694 IDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 753

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTS 454
            P+      +   L++   +  A  + S
Sbjct: 754 EPNSRLLNHVVRELLKKNEIVRAGAYLS 781



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 213/475 (44%), Gaps = 56/475 (11%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P   TY  L++    + R   A     +L   G++ N +  N +++ +C+  + D+A 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 171 KI------------------------------------VRNMEENGF--SPDCVTYNTLI 192
            I                                    +R M E G   SP+ V YNT+I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G++ +A  +   M ++G+  + +T N+++H LC  + +D+A   L     +   
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +  +Y  LI GY    +   A++++ EM+   I+P   T + ++  L + GK ++A D+
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + +   G  PD  ++N +++G+ ++G +       + M+     PD  T N+L+     
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L+KA+  F      G   D VTY T+I++LC+  +++DA    ++M ++ + PD+Y 
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKTPEEID--------- 479
           Y  +       G L +A++  S ++  G     +    +  N  K    +D         
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 539

Query: 480 -----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P ++ YS  ++ +C  G+ + AL++F+     GI  N   Y  L+NG  K
Sbjct: 540 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 594



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 96/204 (47%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  + Y+ I+D LF+ G+    +    +M + G+  +  TYNI++ G  K     EA
Sbjct: 612 GIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 671

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   +       ++ T N +I+G      +EEA  L   +   +L+P+VVTY+ +I  
Sbjct: 672 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITN 731

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA  +   +   G +PN+   N +++   K+ +I +A   +  ++E  FS +
Sbjct: 732 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 791

Query: 185 CVTYNTLIDANCKAGNMEEAFRMM 208
            +T   L+D     G   E  R +
Sbjct: 792 HLTAMLLVDLFSSKGTCREQIRFL 815


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 264/525 (50%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  + YN IL  L KK ++ E   +  +MK+   VPN  TYNIL+   C+ G L  A
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAA 178

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + D M +    P+V T N++I+  C A  LEEA  + + M+     P+ VT+++LI+ 
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A+ L +++ + G  P A+ +  +I+ + K G+ +   KI + M   G SPD
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG  E+   +   +   G   +  + + ++H L      +E Y L  
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G  LD  +Y  +I G+ +  K N+A +L +EMK +   P+  TY ++I GL++  
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 418

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E   +G+  +   ++++I GF   G++++A     ++++K   P++ T N
Sbjct: 419 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 478

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        + +TY+ LI+ LC+ R+   AF    EM++ 
Sbjct: 479 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 538

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY  + + L ++G + EA    S     G I                 P S S
Sbjct: 539 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI-----------------PDSAS 581

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    S  +  DA  +FEETR KG  I+  T + L++ L K
Sbjct: 582 YNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 626



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 239/493 (48%), Gaps = 35/493 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+  TYN ++D L ++GKLN   ++  DM++ GL PN  T NI++   CK   L+EA  
Sbjct: 156 VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACS 215

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M      P+  T++ LI+G    G +++A+ L ++M     +P  + Y +LI  FF
Sbjct: 216 IFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFF 275

Query: 127 ESGRSMEAFK-----------------------------------LIDELDEHGIKPNAV 151
           + GR  +  K                                   L  E++ HG  P+A 
Sbjct: 276 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR 335

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           +++I+I    K G  ++  ++   M+E G   D   YN +ID  CK+G + +A+++++ M
Sbjct: 336 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 395

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG     +T  +++  L    +LDEAYML   A   G  L+ V Y +LI G+ +  + 
Sbjct: 396 KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRI 455

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A  + +E+ ++ + P+ +T+N ++  L ++ +  +A+     +      P++ T++ +
Sbjct: 456 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 515

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G C   +  KA  F  +M +   KP+ +T   ++SGL + G + +A   F  +   G 
Sbjct: 516 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 575

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             DS +YN +I  L    +  DA+ L  E   K       T   +  AL ++  LE+A  
Sbjct: 576 IPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAI 635

Query: 452 FTSIMVETGKINH 464
             +++ ET K  H
Sbjct: 636 VGAVLKETAKSQH 648



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 269/574 (46%), Gaps = 65/574 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY----- 55
           + GFG    N++   + + + K  KL E  D++  M+K    P  + Y IL+        
Sbjct: 3   LSGFG-PSSNISIELVANCV-KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 56  -----CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
                CK   L EA+ + + + QN+ +P  + YN +I G+ +AG  +EA+ L +  ++  
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
            +P V+ YN ++    +  R  EA ++ +E+    + PN  T+NI+I   C+EGK++ A 
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAAL 179

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           +I  +ME  G  P+ +T N +ID  CKA  +EEA  + + M  K    N +T ++++  L
Sbjct: 180 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 239

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF---RDEKANRALK----------- 276
               ++D+AY L       G+    + Y +LI  +F   R E  ++  K           
Sbjct: 240 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 299

Query: 277 ---------------------LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
                                L+ E+     +P   +Y+ +I GL ++G   +  ++   
Sbjct: 300 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 359

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + + G + D   +N +I GFC  G+V KA Q   +M  K   P +VT   ++ GL +   
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 419

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           L++A   F      G  ++ V Y++LI    K  R+++A+ ++ E+ +K L P+ YT+  
Sbjct: 420 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 479

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +  ALV++  + EA      M +              K P    P+ I+YS  IN  C  
Sbjct: 480 LLDALVKAEEINEALICFQSMKDL-------------KCP----PNQITYSILINGLCRV 522

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            ++  A   ++E ++ G+  N  TY  +++GL K
Sbjct: 523 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 556


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 261/531 (49%), Gaps = 17/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T N I+ ++ K  + + V      M    + PN +++NIL+S  C  G LK+A+ +
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNI 197

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M +N  +P + +YN L++  C  G  + A  L   ME   +  DV TYN  I+    
Sbjct: 198 LTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCR 257

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + RS + + ++ ++    I PN V++N +I  + KEGKI  A ++   M E   SP+ +T
Sbjct: 258 NSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLIT 317

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI+  C  GN EEA R++DVM    ++ N +T+ T+L+ L    K D A  +L    
Sbjct: 318 YNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYC 377

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                L+ +S+  +I G  R+   + A +L  EM +  + P   T++ +I G  + G   
Sbjct: 378 INRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNIN 437

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A ++++++ + G +P+   F+T+I+  C  G V +A++F+  M       D  TCN L+
Sbjct: 438 KAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLV 497

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC  G L +A +F       G   +SVT++ +I+          AF +   M      
Sbjct: 498 ASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHH 557

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P  +TY ++   L +     EA+K    +       H +        P  +D  +ISY+ 
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEARKLLKKL-------HCI--------PLAVD--TISYNT 600

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            I E    G   +A+++FEE  Q  I  +  TY  +++GLI+  + +   +
Sbjct: 601 LIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFI 651



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/565 (26%), Positives = 272/565 (48%), Gaps = 51/565 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  ++N ++  L  +GKL +  ++L+ M++ G VP   +YN L+S  CK G  K A+ +
Sbjct: 173 PNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVL 232

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M       DV TYNM I+  C      + + + K+M +  + P+ V+YNTLIN F +
Sbjct: 233 IHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVK 292

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD--- 184
            G+   A ++ +E+ E  + PN +T+NI+I  YC  G  ++A +++  ME N   P+   
Sbjct: 293 EGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVT 352

Query: 185 --------------------------------CVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                           C+++  +ID  C+ G ++EAF+++  M 
Sbjct: 353 IGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMC 412

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           + G+  + IT + +++  C    +++A  +++   + G+  + V + TLI    +     
Sbjct: 413 KDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVY 472

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A+K +  M         FT N+++  L ++GK  +A + L+ + + G++P+  TF+ II
Sbjct: 473 EAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCII 532

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G+ + G    A    ++M+     P   T   LL  LC+     +A K  +       A
Sbjct: 533 NGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLA 592

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           VD+++YNTLI  + K   L +A  L  EM +  + PD YTY  I + L+  GRL  A  F
Sbjct: 593 VDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIF 652

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              +++                 E +  +SI Y+  I+     G+ K AL +F+E  +KG
Sbjct: 653 LGRLMQ----------------KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKG 696

Query: 513 IAINKSTYMNLMNGLIKRRKSISKA 537
           ++++     ++ +G  +  K  S +
Sbjct: 697 LSLDLIALNSITDGYSRMGKVFSAS 721



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 241/540 (44%), Gaps = 23/540 (4%)

Query: 9    DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
            DN T N+++ +L + GKL E  + L  + + GLVPN  T++ +++GY  +G    A  V 
Sbjct: 489  DNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVF 548

Query: 69   DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            D M      P  +TY  L+   C      EA +L K++  + L  D ++YNTLI    +S
Sbjct: 549  DRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKS 608

Query: 129  GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV---RNMEENGFSPDC 185
            G  +EA +L +E+ ++ I P++ T+  ++    +EG++   C  +   R M++   + + 
Sbjct: 609  GNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL--VCAFIFLGRLMQKEILTLNS 666

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            + Y   ID   KAG  + A  +   M  KGL ++ I LN+I        K+  A  L++ 
Sbjct: 667  IVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK 726

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               +    +  ++  L+ GY R +      KL++ M+     P+  TY+++I GL   G 
Sbjct: 727  TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGM 786

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             E  I ML   +      D+ TFN +I   C    ++K +   + M       D  T   
Sbjct: 787  LELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKA 846

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            +   L R  + +    F    + KG    S  Y T++  +C+   ++ AF L  +M    
Sbjct: 847  VTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALG 906

Query: 426  LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN---------HQVVQPNTSKTPE 476
            +  D     A+   L   G++EEA      M+   KI          H   + +  K   
Sbjct: 907  ISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAH 966

Query: 477  ---------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                      +    ++Y+  I+  C+ G    AL  +EE +QKG+  N +TY  L++ +
Sbjct: 967  NLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 208/445 (46%), Gaps = 17/445 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            +++LI  +   GM+  A      M      P V T N ++    ++ R+   +    ++
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
               + PN  + NI+I   C +GK+ KA  I+  ME NG+ P  V+YNTL+   CK G  
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A  ++  M  KG++ +  T N  + +LC   +  + Y++L     +    +EVSY TL
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G+ ++ K   A ++++EM E  + P+  TYN +I G   +G  E+A+ +L+ +  + +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDV 346

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+E T  T+++G     + + A     +        + ++  +++ GLCR G+L++A +
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQ 406

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                   G   D +T++ LI+  CK   +  A  ++S++  +   P+   ++ +     
Sbjct: 407 LLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSC 466

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           + G + EA KF + M   G+                 +  + + +  +   C  G+  +A
Sbjct: 467 KVGNVYEAMKFYAAMNLNGQ-----------------NADNFTCNSLVASLCENGKLVEA 509

Query: 502 LQIFEETRQKGIAINKSTYMNLMNG 526
            +      + G+  N  T+  ++NG
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIING 534



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 202/460 (43%), Gaps = 39/460 (8%)

Query: 6    CLP---DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            C+P   D ++YNT++  + K G L E   L  +M +  ++P+  TY  ++SG  + G L 
Sbjct: 588  CIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLV 647

Query: 63   EAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A   +  + Q + L  +   Y   I+G   AG  + A  L KEME   L  D++  N++
Sbjct: 648  CAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSI 707

Query: 122  INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
             + +   G+   A  LI +     + PN  T NI++  Y +   I    K+   M  +GF
Sbjct: 708  TDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGF 767

Query: 182  SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-- 239
             P+ +TY++LI   C  G +E   +M+ +   +   ++ +T N ++   C    LD+   
Sbjct: 768  FPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVID 827

Query: 240  ---------------------------------YMLLNSASKRGYYLDEVSYGTLITGYF 266
                                             ++ ++   K+G+      Y T++    
Sbjct: 828  LTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMC 887

Query: 267  RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
            R      A KL D+M    I        AM+ GL+  GK E+A+ +L  +L+   IP  +
Sbjct: 888  RVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS 947

Query: 327  TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            TF T++H FC +   ++A      M     K DIV  N+L+S  C  G +  AL F+   
Sbjct: 948  TFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 387  ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
              KG   +  TY  L+S++  +  +     +L ++ ++ L
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL 1047



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 35/357 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G   D +  N+I D   + GK+     L+S  + + ++PN TT+NIL+ GY +   
Sbjct: 692  MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQD 751

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +    ++ +LM ++   P+  TY+ LI G CN GMLE   ++ K   +     D +T+N 
Sbjct: 752  IMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNM 811

Query: 121  LI---------NRFFESGRSMEAFKL--------------------------IDELDEHG 145
            LI         ++  +   +ME F++                          + E+ + G
Sbjct: 812  LIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKG 871

Query: 146  IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
              P +  +  M+K  C+ G I  A K+   M   G S D      ++      G +EEA 
Sbjct: 872  FIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAM 931

Query: 206  RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
             ++  M R      T T  T++H  C +    EA+ L          LD V+Y  LI+  
Sbjct: 932  WILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISAC 991

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
              +     AL  ++E+K++ ++P+  TY  ++  +S      +   +L +L   G++
Sbjct: 992  CANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 18/299 (6%)

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG+     +   ++    ++ +A+     + +M   ++ P+  ++N +I  L   GK ++
Sbjct: 134 RGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKK 193

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++L  + ++G +P   ++NT++   C +G+ + AL   + M  K  + D+ T N+ + 
Sbjct: 194 AVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFID 253

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LCR     +     +    K    + V+YNTLI+   KE ++  A  + +EM E  L P
Sbjct: 254 SLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSP 313

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIM---------VETGKINHQVVQPNTSKTPEEI- 478
           +  TY  +      +G  EEA +   +M         V  G + + + +         I 
Sbjct: 314 NLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373

Query: 479 --------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     + IS++  I+  C  G   +A Q+  E  + G+  +  T+  L+NG  K
Sbjct: 374 ERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCK 432


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 204/368 (55%), Gaps = 2/368 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ VTYNT++     +G++    D++ +M+++G + PN+ TY  ++SG+CK+G + EA++
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 242

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V D ++T+ +  P+   YN LI G+C+ G L+ A   R  M    +   V TYN L++  
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F  GR  EA++L++E+   G+  +  T+NI+I  +CKEG + KA +I  NM   G     
Sbjct: 303 FMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 362

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY +LI A  K G ++E  ++ D   R+G++ + +  N ++++      +D A+ ++  
Sbjct: 363 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 422

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+    D+V+Y TL+ G     + + A KL DEM +R I P   TYN +I G S  G 
Sbjct: 423 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 482

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ + NE++  G  P   T+N +I G C  GQ + A     +MVE    PD  T   
Sbjct: 483 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 542

Query: 366 LLSGLCRE 373
           L+ GL  E
Sbjct: 543 LIEGLTTE 550



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 223/406 (54%), Gaps = 8/406 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L   GK     +LL  M +    PN  TYN +++G+C  G ++ A+ ++  M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESG 129
            +   + P+ +TY  +I+GWC  G ++EA ++  EM +  ++ P+ V YN LI  + + G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   A    D + E G+     T+N+++     +G+  +A ++V  M   G + D  TYN
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+ +CK GN+++A  + + M R+G++   +T  ++++ L  + ++ E   L + A +R
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V Y  LI  +      +RA ++  EM++++I P   TYN ++ GL   G+ ++A
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +++E+ + G+ PD  T+NT+I G+  +G V+ AL+  N+M+ K F P ++T N L+ G
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC--KERRLED 413
           LC+ G  + A    +  +  G   D  TY +LI  L    ER ++D
Sbjct: 512 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDD 557



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 222/407 (54%), Gaps = 6/407 (1%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L +DM +  L    TT+NI++   C  G    A+ ++  M +    P+  TYN +I G+C
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 196

Query: 92  NAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPN 149
           + G ++ A  + +EM E   + P+  TY T+I+ + + GR  EA K+ DE+   G +KP 
Sbjct: 197 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 256

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           AV +N +I  YC +GK+D A      M E G +    TYN L+ A    G   EA+ +++
Sbjct: 257 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 316

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            MG KGL ++  T N +++  C E  + +A  +  + S+RG     V+Y +LI    +  
Sbjct: 317 EMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 376

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +     KL+DE   R I P    YNA+I   S SG  ++A +++ E+ +  + PD+ T+N
Sbjct: 377 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 436

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G C  G+V++A +  ++M ++  +PD+VT N L+SG   +G ++ AL+     + K
Sbjct: 437 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 496

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           G     +TYN LI  LCK  + +DA  ++ EM E  + PD  TY ++
Sbjct: 497 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 543



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 201/381 (52%), Gaps = 6/381 (1%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C+AG    A  L ++M      P+ VTYNT+I  F   GR   A  ++ E+
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211

Query: 142 DEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDANCKAG 199
            E G I PN  T+  +I  +CK G++D+A K+   M   G   P+ V YN LI   C  G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A    D M  +G+ M   T N ++H L  + +  EAY L+     +G  LD  +Y 
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI G+ ++    +AL++++ M  R +  +  TY ++I+ LS+ G+ ++   + +E ++ 
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD   +N +I+   + G +++A +   +M +K   PD VT N L+ GLC  G +++A
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K       +G   D VTYNTLIS    +  ++DA  + +EM  K   P   TY A+   
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L ++G+ ++A+     MVE G
Sbjct: 512 LCKNGQGDDAENMVKEMVENG 532



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 186/337 (55%), Gaps = 1/337 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKE 63
           G  P+  TY T++    K G+++E   +  +M  +G V P    YN L+ GYC  G L  
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+   D M +      V TYN+L++     G   EA+ L +EM    L  DV TYN LIN
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G   +A ++ + +   G++   VT+  +I    K+G++ +  K+       G  P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V YN LI+++  +GN++ AF +M  M +K +  + +T NT++  LC   ++DEA  L+
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  +KRG   D V+Y TLI+GY        AL++ +EM  +   P+  TYNA+I GL ++
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           G+ + A +M+ E++++G+ PD++T+ ++I G  +E +
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 214/456 (46%), Gaps = 32/456 (7%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           SLP     N+L+           + RL   M+SL L     + + L++       S  AF
Sbjct: 89  SLP-----NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAF 139

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L  ++    +     T NIM++  C  GK  +A +++R M      P+ VTYNT+I   
Sbjct: 140 ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGF 195

Query: 196 CKAGNMEEAFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           C  G ++ A  +M  M  R G+  N  T  T++   C   ++DEA  + +    +G    
Sbjct: 196 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 255

Query: 255 E-VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           E V Y  LI GY    K + AL   D M ER +  +  TYN ++  L   G+  +A +++
Sbjct: 256 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 315

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E+   G+  D  T+N +I+G C EG V+KAL+    M  +  +  +VT   L+  L ++
Sbjct: 316 EEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 375

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G +++  K F   + +G   D V YN LI+S      ++ AF ++ EME+K++ PD  TY
Sbjct: 376 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 435

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +   L   GR++EA+K    M + G                 I P  ++Y+  I+ + 
Sbjct: 436 NTLMRGLCLLGRVDEARKLIDEMTKRG-----------------IQPDLVTYNTLISGYS 478

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +G  KDAL+I  E   KG      TY  L+ GL K
Sbjct: 479 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 514



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 37/275 (13%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            TYN ++ ALF  G+  E  +L+ +M  +GL  +  TYNIL++G+CK G +K+A+ + + 
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFEN 352

Query: 71  MTQN---------KSL--------------------------PDVWTYNMLINGWCNAGM 95
           M++           SL                          PD+  YN LIN    +G 
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           ++ AF +  EME  ++ PD VTYNTL+      GR  EA KLIDE+ + GI+P+ VT+N 
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y  +G +  A +I   M   GF+P  +TYN LI   CK G  ++A  M+  M   G
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532

Query: 216 LKMNTITLNTILHTLCC--EKKLDEAYMLLNSASK 248
           +  +  T  +++  L    E+ +D+  +    A+K
Sbjct: 533 ITPDDSTYISLIEGLTTEDERAIDDERLAAADAAK 567



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 150/344 (43%), Gaps = 62/344 (18%)

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+ A+        + R+   M    L ++T +L+ +L  L        A+ L     +
Sbjct: 92  NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFR 147

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
               L   ++  ++       K  RAL+L  +M      P+  TYN +I G    G+ + 
Sbjct: 148 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQA 203

Query: 309 AIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNIL 366
           A+D++ E+ + G I P++ T+ T+I G+C  G+V++A++  ++M+ K   KP+ V  N L
Sbjct: 204 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 263

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C +G L+ AL +    + +G A+   TYN L+ +L  + R  +A+ L+ EM  K L
Sbjct: 264 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 323

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D +T                                                    Y+
Sbjct: 324 ALDVFT----------------------------------------------------YN 331

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             IN HC +G  K AL+IFE   ++G+     TY +L+  L K+
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 375


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 263/531 (49%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +Y+ +L +L  +GK  +  DLL  M + G V  PN   YN ++ G+ K G +
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 235

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD+ TYN +++  C A  +++A    ++M + ++LP+  TYN L
Sbjct: 236 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+  H I P+ VT ++++   CK GKI +A  +   M   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  +YN +++     G + +   + D+M   G+  +  T N ++        LD+A +
Sbjct: 356 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 415

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G   D V+Y T+I    R  K + A++ +++M ++ + P  + YN +I G  
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A ++++E++ +GM  D   F++II+  C  G+V  A    +  V     PD V
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 535

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             ++L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++ + P    Y+ I   L ++GR   A+     M E+G                +I   
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG-------------IAMDICTY 642

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +I         C    + +A+ +F+E R   + IN  T   +++G+ + R+
Sbjct: 643 NIVLRGLFKNRC----FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 689



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 251/529 (47%), Gaps = 72/529 (13%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C P+ V YNT++D  FK+G +N+  DL  +M ++G+ P+  TYN +V   CK   + 
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 271

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT----- 117
           +A   +  M   + LP+ WTYN LI G+ + G  +EA R+ KEM    +LPDVVT     
Sbjct: 272 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331

Query: 118 ------------------------------YNTLINRFFESGRSMEAFKLIDELDEHGIK 147
                                         YN ++N +   G  ++   L D +   GI 
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF-- 205
           P+  T N++IK Y   G +DKA  I   M ++G  PD VTY T+I A C+ G M++A   
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 206 --RMMD-------------VMG------------------RKGLKMNTITLNTILHTLCC 232
             +M+D             + G                    G+ ++ +  ++I++ LC 
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             ++ +A  + +     G + D V Y  L+ GY    K  +AL+++D M    I P+   
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKM 351
           Y  ++ G  + G+ ++ + +  E+LQ G+ P    ++ II G    G+ V   ++FH +M
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFH-EM 630

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            E     DI T NI+L GL +    ++A+  F+        ++ +T NT+I  + + RR+
Sbjct: 631 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 690

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           E+A  L + +   +L P   TY+ + T L++ G +EEA+   S M   G
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 255/534 (47%), Gaps = 20/534 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  N    N L+ G+C+     EA+ +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++Y++L+   C+ G   +A  L + M     +  P+VV YNT+I+ 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT+N ++   CK   +DKA   +R M      P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R  +  + +TL+ ++ +LC   K+ EA  + +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  SY  ++ GY           L+D M    I P  +T+N +I   +  G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ PD  T+ T+I   C  G+++ A++  N+M+++   PD    N
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V ++++I++LCK  R+ DA  +       
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD   Y+ +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNVVV 571

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Y   +N +C  GR  + L +F E  Q+GI  +   Y  +++GL +  +++   V
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 240/449 (53%), Gaps = 2/449 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD VT + ++ +L K GK+ E RD+   M  +G  P+  +YNI+++GY   G L +   
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + DLM  +   PD +T+N+LI  + N GML++A  +  EM    + PDVVTY T+I    
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+  +A +  +++ + G+ P+   +N +I+ +C  G + KA +++  +  NG   D V
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            ++++I+  CK G + +A  + D+    GL  + +  + ++   C   K+++A  + ++ 
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 560

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + V Y TL+ GY +  + +  L L+ EM +R I PST  Y+ +I GL Q+G+T
Sbjct: 561 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 620

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A    +E+ +SG+  D  T+N ++ G       ++A+    ++   + K +I+T N +
Sbjct: 621 VPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDS-VTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           + G+ +   +E+A   F S I + + V S VTY+ +I++L KE  +E+A  + S M+   
Sbjct: 681 IDGMFQTRRVEEAKDLFAS-ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             P+      +   L++   +  A  + S
Sbjct: 740 CEPNSRLLNHVVRELLKKNEIVRAGAYLS 768



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 213/475 (44%), Gaps = 56/475 (11%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P   TY  L++    + R   A     +L   G++ N +  N +++ +C+  + D+A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 171 KI------------------------------------VRNMEENGF--SPDCVTYNTLI 192
            I                                    +R M E G   SP+ V YNT+I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G++ +A  +   M ++G+  + +T N+++H LC  + +D+A   L     +   
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +  +Y  LI GY    +   A++++ EM+   I+P   T + ++  L + GK ++A D+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + +   G  PD  ++N +++G+ ++G +       + M+     PD  T N+L+     
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L+KA+  F      G   D VTY T+I++LC+  +++DA    ++M ++ + PD+Y 
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKTPEEID--------- 479
           Y  +       G L +A++  S ++  G     +    +  N  K    +D         
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 480 -----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P ++ YS  ++ +C  G+ + AL++F+     GI  N   Y  L+NG  K
Sbjct: 527 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 581



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 95/204 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  + Y+ I+D LF+ G+    +    +M + G+  +  TYNI++ G  K     EA
Sbjct: 599 GIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 658

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   +       ++ T N +I+G      +EEA  L   +   +L+P VVTY+ +I  
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 718

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA  +   +   G +PN+   N +++   K+ +I +A   +  ++E  FS +
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 185 CVTYNTLIDANCKAGNMEEAFRMM 208
            +T   L+D     G   E  R +
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRFL 802


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 240/476 (50%), Gaps = 37/476 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+V+Y  +  A  + G++++    L DM ++G V +  T  +++S +C+ G+    
Sbjct: 226 GVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRV 285

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               D   +    P++  +  LING C  G +++AF + +EM      P+V T+  LI+ 
Sbjct: 286 FWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDG 345

Query: 125 FFESGRSMEAFKLIDEL---DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
             + G + +AF+L  +L   D++  KPN  T+  MI  YCKE K+++A  ++  M+E G 
Sbjct: 346 LCKKGWTEKAFRLFLKLVRSDDY--KPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGL 403

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+  TY  LID + KAGN E+A+ +MD+MG++G   N  T N  + +LC + +  EA  
Sbjct: 404 VPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACK 463

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL    + G   D V+Y  LI+   R      AL  + +M +  + P   TYN +I   S
Sbjct: 464 LLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFS 523

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +  + E++  +  E +  G++P + T+ ++I G+C +  V  AL+F N+M +    PD +
Sbjct: 524 RQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSL 583

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKG----------------KAVDSV--------- 396
           T   L+SGLC+E  L++A + + + + KG                K  DS          
Sbjct: 584 TYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERL 643

Query: 397 -------TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                  T NTLI  LC ER++  A     ++ +K    DR T  A  TA  ES +
Sbjct: 644 DKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNK 699



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 239/508 (47%), Gaps = 25/508 (4%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GK  E  +++ +M+  GLV    T N +     ++G +  A  V D M      PD  +Y
Sbjct: 175 GKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSY 234

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            ++   +C  G + +  R  K+M     + D  T   +I+ F E G +   F   D+  E
Sbjct: 235 KLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVE 294

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+KPN +    +I   CK G I +A +++  M + G+ P+  T+  LID  CK G  E+
Sbjct: 295 LGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEK 354

Query: 204 AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+ + ++     K N  T  +++H  C E KL+ A MLL+   ++G   +  +Y  LI
Sbjct: 355 AFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLI 414

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +     +A +L D M +     + FTYNA I  L + G+  +A  +L +  + G+ 
Sbjct: 415 DGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQ 474

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D  T+  +I   C      +AL F +KM +   +PD+ T N L++   R+  +E++ K 
Sbjct: 475 ADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKL 534

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   +  G      TY ++I   C++R +  A    + M +    PD  TY A+ + L +
Sbjct: 535 FAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCK 594

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             +L+EA +    MV+ G             +P E+   +++Y     E+C Q     A+
Sbjct: 595 ESKLDEACQLYEAMVDKG------------LSPCEVTRLTLAY-----EYCKQDDSATAM 637

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I E        ++K  ++  +N LI++
Sbjct: 638 VILER-------LDKKLWIRTVNTLIRK 658



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 233/491 (47%), Gaps = 18/491 (3%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           + +V  + ++G  +EA+ +V  M  +  +  V T N +       G++  A  +  EM  
Sbjct: 165 DCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRV 224

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + PD V+Y  +   +   GR  +  + + ++   G   +  T  +MI  +C++G   +
Sbjct: 225 RGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASR 284

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
                    E G  P+ + + +LI+  CK G++++AF M++ M +KG K N  T   ++ 
Sbjct: 285 VFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALID 344

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            LC +   ++A+ L     +   Y   V +Y ++I GY +++K NRA  L   MKE+ ++
Sbjct: 345 GLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLV 404

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+T TY  +I G S++G  E+A ++++ + + G   +  T+N  I   C +G+  +A + 
Sbjct: 405 PNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKL 464

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             K      + D VT  IL+S LCR     +AL FF      G   D  TYNTLI++  +
Sbjct: 465 LKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSR 524

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           +RR+E++  L +E     L P + TY ++         +  A KF + M + G       
Sbjct: 525 QRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHG------- 577

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                       P S++Y   I+  C + +  +A Q++E    KG++  + T + L    
Sbjct: 578 ----------CTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEY 627

Query: 528 IKRRKSISKAV 538
            K+  S +  V
Sbjct: 628 CKQDDSATAMV 638



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD++TY  ++  L K+ KL+E   L   M  +GL P   T   L   YCK   
Sbjct: 573 MSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDD 632

Query: 61  LKEAMRVVDLMTQNKSLPDVW--TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
              AM +++ + +      +W  T N LI   C+   +  A     ++       D VT 
Sbjct: 633 SATAMVILERLDKK-----LWIRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTL 687

Query: 119 NTLINRFFESGRSMEAFKLIDELDE 143
                  +ES +    + L+ +L E
Sbjct: 688 TAFTTACYESNK----YALVSDLSE 708



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 33/76 (43%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G +P   TY +++    +   ++      + M   G  P+  TY  L+SG CK   L 
Sbjct: 540 GLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLD 599

Query: 63  EAMRVVDLMTQNKSLP 78
           EA ++ + M      P
Sbjct: 600 EACQLYEAMVDKGLSP 615


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 227/444 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T   ++++     +++    +L+ + K G  P+  T+  LV G C +G 
Sbjct: 82  MDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK 141

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ V D M      P+V TY  L+NG C    L EA  L  EM +  + PD+ TYN+
Sbjct: 142 IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNS 201

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+             L++E+ +  I PN V+ NI++   CKEGK+ +A  +V  M + G
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGG 261

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY  L+D +C    M+EA ++ D+M R G   N ++ NT+++  C  +++D+A 
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAM 321

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++    + ++Y TLI G     +   A+ L++EM     +P+  TY+ ++  L
Sbjct: 322 YLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYL 381

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ +  +A+ +L  +  S + PD   +N  I G C  G +E A    + +  +  +PD+
Sbjct: 382 CKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDV 441

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ GLC+ G+L++A K FR     G   +  TYNT+   L +  +   A  LL E
Sbjct: 442 WTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEE 501

Query: 421 MEEKKLGPDRYTYAAIHTALVESG 444
           M  +    D  T A +   L + G
Sbjct: 502 MLARGFSADVSTTALLVKMLSDDG 525



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 229/453 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    +  +L ++ K    + V  L   M   G+ P+  T  I+++ +C L  +  A+ V
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+  L+ G C  G + EA  +  +M      P+VVTY TL+N   +
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             +  EA  L  E+   GI P+  T+N +I   C   +      ++  M ++   P+ V+
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            N ++DA CK G + EA  ++D+M + G++ + +T   ++   C   ++DEA  + +   
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   + VSY TLI GY + ++ ++A+ L++EM  ++++P+T TY+ +I GL   G+ +
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            AI + NE++  G IP+  T++ ++   C   ++ +A+     +   +  PD+   NI +
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G+CR G LE A   F +   +G   D  T+N +I  LCK   L++A  L  EM+E    
Sbjct: 414 DGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCL 473

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            +  TY  I   L+++ +   A +    M+  G
Sbjct: 474 RNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 222/480 (46%), Gaps = 22/480 (4%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+     M      P ++ +  L+              L K+M+S  + PDV T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F    R   A  ++ ++ + G +P+  T   +++  C  GKI +A  +   M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKKLDE 238
           F P+ VTY TL++  CK   + EA  +   M  KG+  +  T N+++H LC  CE K   
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK--H 214

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              LLN   K     + VS   ++    ++ K   A  + D M +  + P   TY A++ 
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G     + ++A+ + + ++++G + +  ++NT+I+G+C   +++KA+    +M  +   P
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           + +T + L+ GLC  G L+ A+  F   +  G+  + VTY+ L+  LCK  RL +A  LL
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             +E   L PD   Y      +  +G LE A+   S                 +  P  +
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFS-----------------NLAPRGL 437

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            P   +++  I   C +G   +A ++F E  + G   N  TY  +  GL++  K+ S+A+
Sbjct: 438 QPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKT-SRAI 496



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 1/381 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY T+++ L K  +L E  +L S+M  +G+ P+  TYN L+   C L  
Sbjct: 152 MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE 211

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K    +++ M ++K +P+V + N++++  C  G + EA  +   M    + PDVVTY  
Sbjct: 212 WKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAA 271

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++         EA K+ D +  +G   N V++N +I  YCK  +IDKA  +   M    
Sbjct: 272 LMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQE 331

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TY+TLI   C  G +++A  + + M   G   N +T + +L  LC   +L EA 
Sbjct: 332 LIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAM 391

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +        D   Y   I G  R      A  L+  +  R + P  +T+N MI GL
Sbjct: 392 ALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGL 451

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A  +  E+ ++G + +  T+NTI  G     +  +A+Q   +M+ + F  D+
Sbjct: 452 CKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADV 511

Query: 361 VTCNILLSGLCREGILEKALK 381
            T  +L+  L  +G L++++K
Sbjct: 512 STTALLVKMLSDDG-LDQSVK 531



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 173/312 (55%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ V+ N ++DAL K+GK+ E  D++  M + G+ P+  TY  L+ G+C    + EA++
Sbjct: 228 MPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVK 287

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D+M +N  + +V +YN LING+C    +++A  L +EM   +L+P+ +TY+TLI+   
Sbjct: 288 VFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLC 347

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L +E+   G  PN VT++I++ + CK  ++ +A  +++ +E +   PD  
Sbjct: 348 HVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQ 407

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN  ID  C+AG++E A  +   +  +GL+ +  T N ++  LC    LDEA  L    
Sbjct: 408 VYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREM 467

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   +  +Y T+  G  ++ K +RA++L +EM  R       T   ++  LS  G  
Sbjct: 468 DENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLD 527

Query: 307 EQAIDMLNELLQ 318
           +    +L E ++
Sbjct: 528 QSVKQILCEFMR 539


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 233/433 (53%), Gaps = 7/433 (1%)

Query: 28  EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
            V ++LS ++     PN   + +L+  + ++G ++EA+ V   M     LP +   NM++
Sbjct: 111 SVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVL 165

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +G    G  +  +++  +M +    P+VVTY TLI+     G  ++AF+L DE+ E  I 
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P  V + I+I+  C E +I +A  + R M  +G  P+  TYNT++D  CK  ++++A  +
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
              M   GL  N +T   ++  LC   ++  A   L   +  G   +   Y  LI GY +
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
               + AL L  E+++ +I+P  FTY+ +I GL    + E+A  +L E+ + G +P+  T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +NT+I G+C EG +EKA++  ++M EK  +P+I+T + L+ G C+ G +E A+  +   +
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           +KG   D V Y  LI    K+   ++AF L  EM+E  L P+ +T + +   L + GR+ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 448 EAQKFTSIMVETG 460
           +A K    + +TG
Sbjct: 526 DAIKL--FLAKTG 536



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 204/377 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP     N +LD L KKG+ + +  +  DM  +G  PN  TY  L+ G C+ G   +A R
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M + K  P V  Y +LI G C    + EA  + + M +  +LP++ TYNT+++ + 
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +     +A +L  E+   G+ PN VT  I+I   CK  ++  A K + +M   G  P+  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LID  CKAGN+ EA  +   + +  +  +  T + ++  LC   +++EA  LL   
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K+G+  + V+Y TLI GY ++    +A+++  +M E+ I P+  T++ +I G  ++GK 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A+ +  E++  G++PD   +  +I G   +G  ++A + H +M E    P++ T + L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 367 LSGLCREGILEKALKFF 383
           + GLC++G +  A+K F
Sbjct: 515 IDGLCKDGRISDAIKLF 531



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 220/441 (49%), Gaps = 23/441 (5%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
             F +   +ES K  P+V  +  LI  F E G   EA  +  ++D   + P     N+++
Sbjct: 111 SVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVL 165

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
               K+G+ D   K+  +M   G SP+ VTY TLID  C+ G+  +AFR+ D M  K + 
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
              +    ++  LC E ++ EA  +  +    G   +  +Y T++ GY +     +AL+L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           + EM    ++P+  T+  +I GL ++ +   A   L ++   G++P+   +N +I G+C 
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G + +AL  H+++ +    PD+ T +IL+ GLC    +E+A    +    KG   ++VT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNTLI   CKE  +E A  + S+M EK + P+  T++ +     ++G++E A    + MV
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
             G +                 P  ++Y+  I+ H   G  K+A ++ +E ++ G+  N 
Sbjct: 466 IKGLL-----------------PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 518 STYMNLMNGLIKRRKSISKAV 538
            T   L++GL K  + IS A+
Sbjct: 509 FTLSCLIDGLCKDGR-ISDAI 528



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 186/347 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY T++D   ++G   +   L  +M ++ + P    Y IL+ G C    
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +   M  +  LP+++TYN +++G+C    +++A  L +EM    LLP+VVT+  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++   + A K + ++   G+ PN   +N +I  YCK G + +A  +   +E++ 
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY+ LI   C    MEEA  ++  M +KG   N +T NT++   C E  +++A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +  +++G   + +++ TLI GY +  K   A+ L+ EM  + ++P    Y A+I G 
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            + G T++A  +  E+ ++G+ P+  T + +I G C +G++  A++ 
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 158/313 (50%), Gaps = 35/313 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LP+  TYNT++D   K   + +  +L  +M   GL+PN  T+ IL+ G CK   
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A + +  M     +P+++ YN LI+G+C AG L EA  L  E+E  ++LPDV TY+ 
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       R  EA  L+ E+ + G  PNAVT+N +I  YCKEG ++KA ++   M E G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +T++TLID  CKAG ME A  +   M  KGL                        
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL------------------------ 469

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                        D V+Y  LI G+F+D     A +L  EM+E  + P+ FT + +I GL
Sbjct: 470 -----------LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 301 SQSGKTEQAIDML 313
            + G+   AI + 
Sbjct: 519 CKDGRISDAIKLF 531



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/446 (20%), Positives = 180/446 (40%), Gaps = 70/446 (15%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +T++T++D   K GK+     L ++M  +GL+P+   Y  L+ G+ K G  KEA
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M +    P+V+T + LI+G C  G + +A         +KL       +T  ++
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA---------IKLFLAKTGTDTTGSK 543

Query: 125 FFESGRSME-----AFKLIDELDEHGI-------------KPNAVTH--------NIMIK 158
             E  RS+      A  L   + E  I             +P A  H        N  +K
Sbjct: 544 TNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLK 603

Query: 159 WYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
            Y +     K     R +  +N  S D  +    + A     ++ E  +M  ++   G +
Sbjct: 604 RYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFE 663

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
                  +++        + +A+ + +    +    + +S+ ++I+ Y  +++ N+AL+L
Sbjct: 664 PIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQL 719

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA----------------------IDMLNE 315
           + +M+   + P   T    +   +  G  +                        I+M ++
Sbjct: 720 FRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSK 779

Query: 316 LLQSG-------MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILL 367
             + G       ++P++ TF  ++      G VE+  Q    M E  S +P I     ++
Sbjct: 780 CGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMV 839

Query: 368 SGLCREGILEKALKFFRSWILKGKAV 393
             LCR G+L +A +F     ++  AV
Sbjct: 840 DLLCRAGLLTEAYEFILKMPVRPNAV 865



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P  F   ++I   S +G    A +M +E+    +I    ++ ++I  +    +  KALQ 
Sbjct: 664 PIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLI----SWTSVISAYVDNQRPNKALQL 719

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL-KGKAVDSVTYNTLIS--S 404
             +M     +PDIVT  + LS     G L+   ++  ++I  +G   D    N+LI+  S
Sbjct: 720 FRQMQMDDVQPDIVTVTVALSACADLGALDMG-EWIHAYIRHRGLDTDLCLNNSLINMYS 778

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSI 455
            C E      F L+         P+  T+  +  A   +G +EE  Q F S+
Sbjct: 779 KCGEIGTARRFSLVL--------PNDVTFMGVLMACSHAGLVEEGKQHFRSM 822



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 45/249 (18%), Positives = 104/249 (41%), Gaps = 18/249 (7%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG  P      +++      G + +  ++  ++  + L+    ++  ++S Y       +
Sbjct: 660 FGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLI----SWTSVISAYVDNQRPNK 715

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+++   M  +   PD+ T  + ++   + G L+    +   +    L  D+   N+LIN
Sbjct: 716 ALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 775

Query: 124 RFFESGR--SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-G 180
            + + G   +   F L        + PN VT   ++      G +++  +  R+M+E+  
Sbjct: 776 MYSKCGEIGTARRFSL--------VLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYS 827

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P    +  ++D  C+AG + EA+  +  M    ++ N +   T+L     +   D+  
Sbjct: 828 LRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWDKKM 884

Query: 241 MLLNSASKR 249
           ++ N   +R
Sbjct: 885 LVRNQIKQR 893



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 57/312 (18%), Positives = 115/312 (36%), Gaps = 49/312 (15%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+ +N S  D ++    +        L E  ++   + +    P +    +LI+ +  +G
Sbjct: 621 LLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATG 680

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
              +A  + DE+       N ++   +I  Y    + +KA ++ R M+ +   PD VT  
Sbjct: 681 NVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVT 736

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
             + A    G ++    +   +  +GL  +    N+                L+N  SK 
Sbjct: 737 VALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNS----------------LINMYSKC 780

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G        GT            R   L        ++P+  T+  ++   S +G  E+ 
Sbjct: 781 G------EIGT-----------ARRFSL--------VLPNDVTFMGVLMACSHAGLVEEG 815

Query: 310 IDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
                 + +   + P  + F  ++   C  G + +A +F  KM     +P+ V    LL 
Sbjct: 816 KQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLG 872

Query: 369 GLCREGILEKAL 380
               +G+ +K +
Sbjct: 873 ACSLQGMWDKKM 884


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 243/457 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V+Y+T+++     G+L +V  L+ +M+ +GL PN  TYN ++   CK G + +A RV
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M     +PD   Y  LI+G+C  G ++ A++L  EME  +++PD + Y  +I     
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+ MEA K+ +++   G++P+ VT+  +I  YCK G+++KA  +   M ++G +P+ VT
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L D  CK G ++ A  ++  M  KGL++N  T N++++ LC    + +A  L+    
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G Y D +++ TL+  Y +  +  +A +L  EM +R + P+  T+N ++ G   SG  E
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+ G++P+ TT+N+++  +C    +    + +  M  +   PD  T NIL+
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILI 367

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   +++A    +    KG  + + +YN++I    K++++ +A  L  EM  + + 
Sbjct: 368 KGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMA 427

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            D   Y          G +E A +     +E   +N 
Sbjct: 428 ADAEIYNLFVDISYGEGNMETALELCDEAIENCFLNR 464



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 228/425 (53%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           MK +G  P+  +Y+ +++GYC  G L++ ++++  M      P+++TYN +I   C +G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           +++A R+ +EM +  ++PD V Y TLI+ F + G    A+KL DE+++  I P+ + +  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   C+ GK+ +A K+   M   G  PD VTY TLID  CK+G ME+AF + + M + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L  N +T   +   LC   ++D A  LL+    +G  L+  +Y +L+ G  +     +A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           KL +EM+   + P T T+  ++    ++G+  +A ++L E+L  G+ P   TFN +++GF
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G +E   +    M+EK   P+  T N L+   C    +    + ++    +G   DS
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            TYN LI   CK R +++A+ L  EM EK       +Y +I     +  ++ EA++    
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 456 MVETG 460
           M   G
Sbjct: 421 MRREG 425



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 219/420 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+  TYN+I+  L K GK+++   +L +M  QG+VP+   Y  L+ G+CKLG 
Sbjct: 36  MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A ++ D M + + +PD   Y  +I G C  G + EA ++  +M S  + PD VTY T
Sbjct: 96  IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + +SG   +AF L +++ + G+ PN VT+  +    CK G++D A +++  M   G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +  TYN+L++  CK+GN+ +A ++M+ M   G+  +TIT  T++   C   ++ +A+
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     RG     +++  L+ G+          +L   M E+ IMP+T TYN+++   
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                     ++   +   G++PD  T+N +I G C    +++A   H +M EK F    
Sbjct: 336 CIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTA 395

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N ++ G  ++  + +A + F     +G A D+  YN  +     E  +E A  L  E
Sbjct: 396 SSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 191/398 (47%), Gaps = 53/398 (13%)

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M+  G +PD V+Y+T+I+  C  G +++  +++  M  KGLK N  T N+I+  LC   K
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D+A  +L     +G   D V Y TLI G+ +      A KL+DEM++++I+P    Y A
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL + GK  +A  + N++   G+ PDE T+ T+I G+C  G++EKA   HN+MV+  
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P++VT   L  GLC+ G ++ A +       KG  ++  TYN+L++ LCK   +  A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 416 GLLSEMEEKKLGPDRYTYAAI-------------HTALVE-------------------- 442
            L+ EME   + PD  T+  +             H  L E                    
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 443 --SGRLEEAQKFTSIMVETG---------KINHQVVQPNTSKTPEEID---------PSS 482
             SG LE+ ++  + M+E G          +  Q    N  +   EI          P S
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
            +Y+  I  HC     K+A  + +E  +KG  +  S+Y
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 182/350 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD + Y  ++  L + GK+ E   + + M  +G+ P+  TY  L+ GYCK G +++A  
Sbjct: 112 VPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS 171

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M Q+   P+V TY  L +G C  G ++ A  L  EM    L  ++ TYN+L+N   
Sbjct: 172 LHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLC 231

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +SG   +A KL++E++  G+ P+ +T   ++  YCK G++ KA +++R M + G  P  +
Sbjct: 232 KSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI 291

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+N L++  C +G +E+  R++  M  KG+  NT T N+++   C    +     +    
Sbjct: 292 TFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             RG   D  +Y  LI G+ +      A  L  EM E+    +  +YN++I G  +  K 
Sbjct: 352 CARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKI 411

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            +A ++  E+ + GM  D   +N  +     EG +E AL+  ++ +E  F
Sbjct: 412 SEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENCF 461



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 18/160 (11%)

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G A D V+Y+T+I+  C    L+    L+ EM+ K L P+ YTY +I   L +SG+++
Sbjct: 3   FRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVD 62

Query: 448 EAQKFTSIMVETGKINHQVVQPN------------------TSKTPEEIDPSSISYSEKI 489
           +A++    M+  G +   VV                          + I P  I+Y+  I
Sbjct: 63  DAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVI 122

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              C  G+  +A ++F +   +G+  ++ TY  L++G  K
Sbjct: 123 CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCK 162


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 223/430 (51%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT+NT+L  L  K K+ +   L  +M K G  P+  TY+ +++G CK+G    
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++  M +    P+V  YN +I+  C   ++ EA     EM    + PDV TY+++++
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   GR  EA  L  ++ E  + PN VT  I+I   CK+  I +A  +   M E G  P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYN L+D  C    M+EA ++ ++M RKG   N  + N +++  C   ++DEA  LL
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S +    D  +Y TL+ G+ +  +   A +L  EM    ++P+  TY+ ++ GL + 
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A ++L  + +S + P+   +  +I G C+ G++E A +  + +  K  +P +VT 
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +++SGL + G+  +A + FR   + G   +S TYN +I    +     +A  L+ EM  
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVG 423

Query: 424 KKLGPDRYTY 433
           K    D  T+
Sbjct: 424 KGFSADSSTF 433



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 216/425 (50%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M K GL P   T+N L+SG C    + +A+++ D M +    PDV TY+ +ING C  G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
              A +L K+ME     P+VV YNT+I+   +     EA     E+ + GI P+  T++ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++  +C  G++++A  + + M E    P+ VT+  LID  CK   + EA+ + + M  KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L+ +  T N ++   C   ++DEA  L N   ++G   +  SY  LI G+ +  + + A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L  EM  + + P  FTY+ ++ G  Q G+ ++A ++L E+   G++P+  T++ ++ G 
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G +++A +    M E   +P+I    IL+ G+C  G LE A + F +  +KG     
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTY  +IS L K     +A  L  EM      P+  TY  I    + +G    A +    
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 456 MVETG 460
           MV  G
Sbjct: 421 MVGKG 425



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 195/366 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ V YNTI+D+L K   + E  D  S+M K+G+ P+  TY+ ++ G+C LG 
Sbjct: 71  MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +   M +   +P+  T+ +LI+G C   M+ EA+ + + M    L PDV TYN 
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +    +  EA KL + +D  G  PN  ++NI+I  +CK G+ID+A  ++  M    
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  TY+TL+   C+ G  +EA  ++  M   GL  N IT + +L  LC    LDEA+
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAF 310

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL +  +     +   Y  LI G     K   A +L+  +  + I P+  TY  MI GL
Sbjct: 311 ELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGL 370

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G + +A ++  E+  +G +P+  T+N II GF   G    A++   +MV K F  D 
Sbjct: 371 LKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADS 430

Query: 361 VTCNIL 366
            T  +L
Sbjct: 431 STFRML 436



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 201/394 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TY+TI++ L K G       LL  M+++G  PN   YN ++   CK   + EAM  
Sbjct: 43  PDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDF 102

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +    PDV+TY+ +++G+CN G + EA  L K+M    ++P+ VT+  LI+   +
Sbjct: 103 FSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCK 162

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                EA+ + + + E G++P+  T+N ++  YC   ++D+A K+   M+  G +P+  +
Sbjct: 163 KRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRS 222

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI+ +CK+G ++EA  ++  M  K L  +  T +T++   C   +  EA  LL    
Sbjct: 223 YNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMC 282

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   + ++Y  ++ G  +    + A +L   M+E +I P+ F Y  +I G+   GK E
Sbjct: 283 SYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLE 342

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++ + L   G+ P   T+  +I G    G   +A +   +M      P+  T N+++
Sbjct: 343 AARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVII 402

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
            G  R G    A++     + KG + DS T+  L
Sbjct: 403 QGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 217/424 (51%), Gaps = 17/424 (4%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M  L L P +VT+NTL++      + M+A KL DE+ + G +P+ +T++ +I   CK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
              A ++++ MEE G  P+ V YNT+ID+ CK   + EA      M ++G+  +  T ++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ILH  C   +++EA  L     +R    ++V++  LI G  +    + A  +++ M E+ 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           + P  +TYNA++ G     + ++A  + N + + G  P+  ++N +I+G C  G++++A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
               +M  KS  PDI T + L+ G C+ G  ++A +  +     G   + +TY+ ++  L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK   L++AF LL  M+E K+ P+ + Y  +   +   G+LE A++  S +   G     
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG----- 355

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       I P+ ++Y+  I+     G   +A ++F E    G   N  TY  ++ 
Sbjct: 356 ------------IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQ 403

Query: 526 GLIK 529
           G ++
Sbjct: 404 GFLR 407



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 104/186 (55%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY+T++    + G+  E ++LL +M   GL+PN  TY+I++ G CK G L EA  +
Sbjct: 253 PDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFEL 312

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M ++K  P+++ Y +LI G C  G LE A  L   +    + P VVTY  +I+   +
Sbjct: 313 LKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLK 372

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G S EA +L  E+  +G  PN+ T+N++I+ + + G    A +++  M   GFS D  T
Sbjct: 373 GGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSST 432

Query: 188 YNTLID 193
           +  L D
Sbjct: 433 FRMLSD 438



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 18/187 (9%)

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M +   +P +VT N LLSGLC +  +  A+K F   +  G   D +TY+T+I+ LCK   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
              A  LL +MEEK   P+   Y  I  +L +   + EA  F S MV+ G          
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG---------- 110

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  I P   +YS  ++  C+ GR  +A  +F++  ++ +  NK T+  L++GL K+
Sbjct: 111 -------IPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKK 163

Query: 531 RKSISKA 537
           R  IS+A
Sbjct: 164 RM-ISEA 169


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 265/564 (46%), Gaps = 59/564 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D  TY T ++A  K GK++E   L   M + G++PN  TYN L+ G CK G L+EA
Sbjct: 236 GVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEA 295

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M +NK  P + TY +L+NG       +EA  +  EM S    P+   +N LI+ 
Sbjct: 296 LMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDG 355

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC----------------------- 161
           +   G   +A ++ D++   G+KPNAVTHN +++ +C                       
Sbjct: 356 YSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVN 415

Query: 162 ------------KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA----F 205
                       K  K D A KIV+ +       +      L+   CK G   EA    F
Sbjct: 416 EDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWF 475

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R+ D   +KGL  NT T N +L+ LC    ++E + +     +RG  LD +SY TLI G 
Sbjct: 476 RLAD---KKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGC 532

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +  K   A KL ++M ++   P T+TYN ++ GL+  GK +    +L+E    G++P+ 
Sbjct: 533 CKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNI 592

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+  ++ G+C+  +++ A+   NK+V    +   V  NIL++   + G   +A K   +
Sbjct: 593 YTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDA 652

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                      TY+++I  +C    +E+A G+  EM  + L P+ + Y A+     + G+
Sbjct: 653 MRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQ 712

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +++ +               ++Q  TS     I P+ I+Y+  I+ +C  G  K+A ++ 
Sbjct: 713 MDQIE--------------SILQEMTSNC---IQPNKITYTIMIDGYCKMGNTKEATKLL 755

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
            E    GI+ +  TY  L  G  K
Sbjct: 756 NEMIANGISPDTVTYTVLQKGYCK 779



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 257/526 (48%), Gaps = 18/526 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   + N ++ +L K  +L++   +   M + G++ +  TY   ++ YCK G + EA
Sbjct: 201 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 260

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M +   LP+V TYN LI+G C +G LEEA   +  M   K+ P +VTY  L+N 
Sbjct: 261 VGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNG 320

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  +  EA  ++ E+   G  PN    N +I  Y ++G +D A ++  +M   G  P+
Sbjct: 321 LVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPN 380

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+NTL+   C+   ME+A ++++ +    L +N    + +LH LC   K D A  ++ 
Sbjct: 381 AVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVK 440

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWGLSQS 303
           +   R   +++     L+ G  +  K   A+ LW  + +++ +  +T T NA+++GL + 
Sbjct: 441 ALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCER 500

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+   +  E+++ G++ D  ++NT+I G C  G++E+A +   KM+++ FKPD  T 
Sbjct: 501 GNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTY 560

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ GL  +G ++   +        G   +  TY  ++   C   R+++A  L +++  
Sbjct: 561 NFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVY 620

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
            K+      Y  +  A  ++G   EA K    M  +                  I P+  
Sbjct: 621 NKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSS-----------------NIHPTIF 663

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +YS  I+  C     ++A  IFEE R +G+  N   Y  L+ G  K
Sbjct: 664 TYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCK 709



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 173/331 (52%), Gaps = 5/331 (1%)

Query: 19  ALFKKGKLNEVRDL---LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
            L K GK  E  DL   L+D  K+GL  N TT N L+ G C+ G ++E   V   M +  
Sbjct: 460 GLCKCGKHLEAIDLWFRLAD--KKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERG 517

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
            + D  +YN LI G C +G +EEAF+L+++M      PD  TYN L+    + G+  +  
Sbjct: 518 LVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVG 577

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           +++ E  +HG+ PN  T+ +M++ YC   +ID A  +   +  N      V YN LI A+
Sbjct: 578 RVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAH 637

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
            KAGN  EAF++ D M    +     T ++I+H +CC   ++EA  +       G   + 
Sbjct: 638 SKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNV 697

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
             Y  LI GY +  + ++   +  EM    I P+  TY  MI G  + G T++A  +LNE
Sbjct: 698 FCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNE 757

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           ++ +G+ PD  T+  +  G+C E ++E+ LQ
Sbjct: 758 MIANGISPDTVTYTVLQKGYCKENELEETLQ 788



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 200/447 (44%), Gaps = 36/447 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+   +N ++D   +KG +++   +  DM  +GL PN  T+N L+ G+C+   +++A
Sbjct: 341 GFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA 400

Query: 65  MRVVDLMTQN--KSLPDVWTY---------------------------------NMLING 89
            +V++ +  N      D  +Y                                  +L+ G
Sbjct: 401 EQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCG 460

Query: 90  WCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
            C  G   EA  L   +   K L  +  T N L+    E G   E F +  E+ E G+  
Sbjct: 461 LCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVL 520

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           + +++N +I   CK GKI++A K+   M + GF PD  TYN L+      G M++  R++
Sbjct: 521 DGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVL 580

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
                 G+  N  T   +L   C   ++D A  L N        L  V Y  LI  + + 
Sbjct: 581 HEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKA 640

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A KL D M+   I P+ FTY+++I G+  +   E+A  +  E+   G++P+   +
Sbjct: 641 GNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCY 700

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             +I G+C  GQ+++      +M     +P+ +T  I++ G C+ G  ++A K     I 
Sbjct: 701 TALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIA 760

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAF 415
            G + D+VTY  L    CKE  LE+  
Sbjct: 761 NGISPDTVTYTVLQKGYCKENELEETL 787



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 160/328 (48%), Gaps = 5/328 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   +  T N +L  L ++G + EV  +  +M ++GLV +  +YN L+ G CK G ++EA
Sbjct: 482 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 541

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ + M +    PD +TYN L+ G  + G +++  R+  E +   ++P++ TY  ++  
Sbjct: 542 FKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEG 601

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  + R   A  L ++L  + ++ + V +NI+I  + K G   +A K+   M  +   P 
Sbjct: 602 YCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPT 661

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+++I   C    +EEA  + + M  +GL  N      ++   C   ++D+   +L 
Sbjct: 662 IFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQ 721

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             +      ++++Y  +I GY +      A KL +EM    I P T TY  +  G  +  
Sbjct: 722 EMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKEN 781

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTII 332
           + E+ +        + +  +E T+ T++
Sbjct: 782 ELEETLQG-----DTAVPLEEITYTTLV 804



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 7/126 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P+   Y  ++    K G+++++  +L +M    + PN+ TY I++ GYCK+G 
Sbjct: 688 MRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGN 747

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP-DVVTYN 119
            KEA ++++ M  N   PD  TY +L  G+C    LEE       ++    +P + +TY 
Sbjct: 748 TKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET------LQGDTAVPLEEITYT 801

Query: 120 TLINRF 125
           TL+++ 
Sbjct: 802 TLVDKL 807


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 16/461 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL----------------VPNRTTYNIL 51
           P  + +N IL +L K    + V  L   M+ +G+                 PN  T+  L
Sbjct: 74  PPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTL 133

Query: 52  VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
           + G C  G + +A+   D +       D   Y  LI+G C  G    A  L + ++   +
Sbjct: 134 IKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLV 193

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
            P+VV Y+T+I+   +     +AF L  E+   GI PN VT++ +I  +   G++  A  
Sbjct: 194 QPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAID 253

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           +   M      PD  T+N L+D  CK G M+E   +  +M ++G+K N +T  +++   C
Sbjct: 254 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 313

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
             K++++A  +L + S+RG   D  SY  LI G+ + +K + A+ L+ EM  + I+P   
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVV 373

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TYN++I GL + GK   A+ +++E+   G+ PD  T+++I+   C   QV+KA+    K+
Sbjct: 374 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 433

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            ++  +P++ T  IL+ GLC+ G LE A   F   ++KG  +   TY  +I   C +   
Sbjct: 434 KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 493

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           ++A  LLS+M++    PD  TY  I  +L +    ++A+K 
Sbjct: 494 DEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 212/401 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +T+ T++  L  KG++++      ++   G   ++  Y  L+ G CK+G  + A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +  N   P+V  Y+ +I+G C    + +AF L  EM S  + P+VVTY+ LI+ 
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF  G+  +A  L +++    IKP+  T NI++  +CK+GK+ +   +   M + G  P+
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY +L+D  C    + +A  ++  M ++G+  +  + N ++   C  KK+DEA  L  
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +    D V+Y +LI G  +  K + ALKL DEM +R + P   TY++++  L ++ 
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 421

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++AI +L +L   G+ P+  T+  +I G C  G++E A      ++ K +   + T  
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +++ G C +G+ ++AL             D+VTY  +I SL
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 203/451 (45%), Gaps = 34/451 (7%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           + + Y+++   F  +   ++AF L   L      P A+  N ++    K         + 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 174 RNMEENG----------------FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           + ME  G                + P+ +T+ TLI   C  G + +A    D +   G +
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
           ++ +   T++H LC   +   A  LL          + V Y T+I G  +D+  N A  L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           + EM  + I P+  TY+A+I G    G+ + AID+ N+++   + PD  TFN ++ GFC 
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           +G++++       M+++  KP++VT   L+ G C    + KA     +   +G   D  +
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN LI   CK +++++A  L  EM  K + PD  TY ++   L + G++  A K    M 
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 399

Query: 458 ETGKI---------------NHQV---VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           + G                 NHQV   +   T    + I P+  +Y+  I+  C  GR +
Sbjct: 400 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLE 459

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           DA  IFE+   KG  I  +TY  +++G   +
Sbjct: 460 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNK 490



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 169/318 (53%), Gaps = 1/318 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY+ ++   F  G+L +  DL + M  + + P+  T+NILV G+CK G +KE 
Sbjct: 227 GISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG 286

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V  +M +    P+V TY  L++G+C    + +A  +   M    + PD+ +YN LI+ 
Sbjct: 287 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDG 346

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +  EA  L  E+    I P+ VT+N +I   CK GKI  A K+V  M + G  PD
Sbjct: 347 FCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 406

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY++++DA CK   +++A  ++  +  +G++ N  T   ++  LC   +L++A+ +  
Sbjct: 407 IITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFE 466

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +GY +   +Y  +I G+      + AL L  +MK+   +P   TY  +I  L    
Sbjct: 467 DLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKD 526

Query: 305 KTEQAIDMLNELLQSGMI 322
           + ++A + L E++  G++
Sbjct: 527 ENDKA-EKLREMITRGLL 543



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 2/138 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TY++ILDAL K  ++++   LL+ +K QG+ PN  TY IL+ G CK G 
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGR 457

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L++A  +  DL+ +  ++  V TY ++I+G+CN G+ +EA  L  +M+    +PD VTY 
Sbjct: 458 LEDAHNIFEDLLVKGYNI-TVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYE 516

Query: 120 TLINRFFESGRSMEAFKL 137
            +I   F+   + +A KL
Sbjct: 517 IIIRSLFDKDENDKAEKL 534


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 250/462 (54%), Gaps = 8/462 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P++VT+N +++   K+G+  +   LL  M  + + PN  +YN L+ G CKL  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 61  LKEAMRVV-DLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             EA  +V D++++  +S PD+ TY+ L++G+C AG +EE+  L KE+ S  L PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
             ++    +S R  EA +L++E+   G  P  +T N +I   C+E  ++ A  +++ M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G   D VTYNTL+D  CKAG ++EA ++++ M   G   + +  ++ ++ LC   K+ +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP-STFTYNAMI 297
           A+ +L       +  + V+Y T++ G  +  K + AL++ ++M        +   Y+ ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL + G+T++A  ++  + ++G  PD  T++++++G C  G++E+A++   +M  +  K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV-----TYNTLISSLCKERRLE 412
           P+ VT   L+ GLC  G L +A +        G           TYN LI  LCK  R++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           DA      M  +   PD  +Y+ I   L  SGR  +A+   S
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILS 462



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 247/482 (51%), Gaps = 25/482 (5%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M + G  PN  T+N LV+G+ K G   +  R+++ M      P+V +YN L+ G C    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 96  LEEAFRLRKEMESL--KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
             EA  L ++M S   +  PD+VTY+TL++ + ++G+  E+ +L+ E+   G++P+A+ +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
             ++   CK  ++ +A +++  M   G  P  +T+NTLI   C+  N+E A  ++  M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
            G+K + +T NT++  LC   +L EA  LL      G   D V+Y + + G  +  K   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIPDETTFNTII 332
           A ++ ++M++    P+  TYN ++ GL +SGK + A++M+ ++  S G   +   ++T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            G C  G+ ++A      M     +PD+VT + L++GLC+ G +E+A++  R   ++G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-----LGPDRYTYAAIHTALVESGRLE 447
            ++VTY +L+  LC   RL +A  ++ EM           P   TY A+   L ++GR++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A KF   M   G                  DP  +SYS  +      GR   A  I  E
Sbjct: 421 DALKFFQRMRSQG-----------------CDPDGVSYSTIVEGLARSGRALQAEMILSE 463

Query: 508 TR 509
            R
Sbjct: 464 VR 465



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 233/467 (49%), Gaps = 15/467 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +    P+  T+N L+NG+   G   +  RL + M +  + P+VV+YN L+    +  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 131 SMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
             EA +L+ ++   G +  P+ VT++ ++  YCK GK++++ ++++ +   G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             ++ + CK+  + EA  +++ M R G     IT NT++   C EK L+ A  LL   + 
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+Y TL+ G  +  +   A +L + MK     P    Y++ ++GL +SGK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILL 367
           A  +L ++  S   P+  T+NTI+ G C  G+++ AL+   +M        ++V  + ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+ G  ++A     +    G   D VTY++L++ LCK  ++E+A   + EM  +   
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  TY ++   L   GRL EA++    M             +         PS  +Y+ 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMS------------SGGGGGHHCPPSVSTYNA 408

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            I   C  GR  DAL+ F+  R +G   +  +Y  ++ GL +  +++
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRAL 455



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 153/288 (53%), Gaps = 6/288 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D VTYNT++D L K G+L E   LL  MK  G  P+   Y+  V G CK G 
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP-DVVTYN 119
           + +A +V++ M  +   P+V TYN +++G C +G ++ A  + ++M S      +VV Y+
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+++   + GR+ EA  +++ +   G +P+ VT++ ++   CK GKI++A + VR M   
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-----NTITLNTILHTLCCEK 234
           G  P+ VTY +L+   C  G + EA RM++ M   G        +  T N ++  LC   
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAG 417

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
           ++D+A         +G   D VSY T++ G  R  +A +A  +  E++
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 245/451 (54%), Gaps = 4/451 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C      Y+ ++ +L K G L +  ++   MK +  VP+  TYN+L++  C  G   +A+
Sbjct: 6   CAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKAL 65

Query: 66  RVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +   M + K + PD WTYN LI+G C++G  E A +L  EM    +  +V TY+++I  
Sbjct: 66  DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKS 125

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  +  E++K+++E+   G  P+    N +++ + +   ++KA ++ ++M E+G+ PD
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMNTITLNTILHTLCCEKKLDEAYML 242
            V+Y+ LI    K G ++E+ +++  M  +  G   N IT +T++H LC   +L++A  +
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
             S  + G   ++ +Y TLI G  R EK  +A +L+++M +  I P    YN++I G  +
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 303 SGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            G  ++A  +  E+   +G+ P   TFNT+I GFC  G++ +A +   +M  K    D  
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T  IL++GL R   L++AL+ ++    K   +D V+  + +  LCK   ++ A+ +    
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 425

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +    P+  T+  +  +L++ GR+E+AQK 
Sbjct: 426 RKSGAVPNPETFRILSESLIKLGRVEDAQKL 456



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 222/454 (48%), Gaps = 25/454 (5%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            Y+ ++     AGML +A  + + M+S   +P +VTYN LIN    +G   +A  L   +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 142 D-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
             E  ++P+  T+N +I   C  G  + A K++  M +   + +  TY+++I +  K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
            EE++++++ M   G   +    N ++        +++A  +     + GY  D VSY  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 261 LITGYFRDEKANRALKLWDEMKERQI--MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
           LI G  +  K + +LK+  EM  R    +P+  T++ +I GL ++G+ E+A+++   +L+
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G  P++ T+ T+I G C   +V +A +   KM +    PD V  N L++G C+ G +++
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 379 ALKFFRSWILKGKAVDS--VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           A K +R  +  G  +    VT+NTLI   CK  +L  A  L++EM  K L  D  TY  +
Sbjct: 312 AEKLYRE-MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRIL 370

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP-SSISYSEKINEHCSQ 495
              L  + +L+EA +    M E   +               +DP S +S+   +   C  
Sbjct: 371 IAGLSRATKLDEALEVYKQMREKKFL---------------LDPVSCVSF---VGGLCKT 412

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           G    A  +FE TR+ G   N  T+  L   LIK
Sbjct: 413 GNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 446



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 192/384 (50%), Gaps = 19/384 (4%)

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            ++ +++   K G + +A ++   M+     P  VTYN LI++ C AG   +A  +   M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 212 GR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            R K ++ +  T NT++  LC     + A  LL+    +    +  +Y ++I    ++ K
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              + K+ +EM      P  F +N ++ G ++S   E+A ++   +++SG  PD  +++ 
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKS--FKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           +IHG    G+++++L+  ++M  ++  + P+++T + L+ GLCR G LEKAL+ F S + 
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   +  TY TLI+ LC+  ++  A  L  +M +  + PD   Y ++     + G ++E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A+K    M  +G    Q              P+ ++++  I+  C  G+   A ++  E 
Sbjct: 312 AEKLYREM--SGGAGLQ--------------PTIVTFNTLIDGFCKLGKLGRANELVAEM 355

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
             KG+A +  TY  L+ GL +  K
Sbjct: 356 GTKGLAADTCTYRILIAGLSRATK 379



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 134/250 (53%), Gaps = 1/250 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P+ +T++T++  L + G+L +  ++   M + G  PN+ TY  L++G C+   
Sbjct: 214 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEK 273

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYN 119
           + +A  + + MTQ    PD   YN LI G+C  G ++EA +L +EM     L P +VT+N
Sbjct: 274 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 333

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+ F + G+   A +L+ E+   G+  +  T+ I+I    +  K+D+A ++ + M E 
Sbjct: 334 TLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREK 393

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            F  D V+  + +   CK GN+++A+ + +   + G   N  T   +  +L    ++++A
Sbjct: 394 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453

Query: 240 YMLLNSASKR 249
             L+  A  R
Sbjct: 454 QKLMEPAKAR 463



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 23/265 (8%)

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
            Y+ ++  L+++G   QA+++   +     +P   T+N +I+  C+ G+  KAL     M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 352 -VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
             EK  +PD  T N L+SGLC  G  E A K       K  A +  TY+++I SL KE +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQV 466
            E+++ +L EM      PD + +  +      S  +E+A++    MVE+G     +++ +
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 467 VQPNTSKTPEEID-----------------PSSISYSEKINEHCSQGRYKDALQIFEETR 509
           +    +K  + +D                 P+ I++S  I+  C  G  + AL++F    
Sbjct: 192 LIHGLAKIGK-LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSI 534
           + G   NK TY  L+ GL +  K I
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVI 275


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 257/512 (50%), Gaps = 18/512 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D +   T++     + ++    +L  +  K G+VP +  Y +L+ G  ++G  ++A  + 
Sbjct: 296 DVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             MT    LP  +  ++++ G  N    ++A  L +EM     LPDV TYN LI+   ++
Sbjct: 356 RQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMAD-SGLPDVFTYNNLIHWHCQA 414

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            +  EA  L D + + G+KP+  T+N ++  YCK+G +D+A K+   M   GF P+ VTY
Sbjct: 415 HKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTY 474

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            TL+       + + A+ ++D M + G+  N  T N +++ +C   ++ E   +L S   
Sbjct: 475 ITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMS 534

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G+    ++Y ++I G+ +      A  ++ +M+E+ + P+  TY + I G  ++G ++ 
Sbjct: 535 EGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDM 594

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+ MLN++ + G+ PD   +N +I+GFC EG +  ALQ    +++    P+ V  N L++
Sbjct: 595 ALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLIT 654

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G     ++++  KF+ S I  G   D+ TY TLI    K+  +  A  L SEM  K   P
Sbjct: 655 GYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIP 714

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D +T+ A+   L  SG ++ A+K    M                    ++ P+   Y+  
Sbjct: 715 DAFTFTALTHGLCRSGDIDGAKKLLEEMRRL-----------------DVRPNVFIYNML 757

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           IN +    + ++A ++ +E    GI  + +TY
Sbjct: 758 INGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 196/368 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   TYN++L    KKG ++E   L S+M  +G  PN  TY  L+ GY     
Sbjct: 427 MKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKD 486

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  ++D M QN    + +TYN+LING C    + E   + K   S   +P ++TYN+
Sbjct: 487 FDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNS 546

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F ++G    AF +  ++ E G+ PN +T+   I  YC+ G  D A K++ ++   G
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V YN LI+  C+ GNM  A +++ ++ + GL  NT+  N+++        + E  
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVS 666

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
               S  K G   D  +Y TLI G+ +D     AL+L+ EM  +  +P  FT+ A+  GL
Sbjct: 667 KFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG  + A  +L E+ +  + P+   +N +I+G+  + ++++A + H++M+    +PD 
Sbjct: 727 CRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDD 786

Query: 361 VTCNILLS 368
            T +IL+S
Sbjct: 787 TTYDILVS 794



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/563 (26%), Positives = 243/563 (43%), Gaps = 51/563 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D   ++ ++ A  K+G   +   L  +M    + P++  Y + ++  CKLG 
Sbjct: 183 MRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGD 242

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R++  M +       +TY  +++     G +EEA R+  EM       DV+   T
Sbjct: 243 GGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATT 302

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  +        A  L  E  + GI P  V + ++I+   + G   KA ++ R M   G
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG 362

Query: 181 F----------------------------------SPDCVTYNTLIDANCKAGNMEEAFR 206
                                               PD  TYN LI  +C+A  + EA  
Sbjct: 363 LLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALN 422

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           + D M + G+K +  T N++L   C +  +DEA  L +     G+  + V+Y TL+ GY 
Sbjct: 423 LFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYI 482

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
             +  + A  L DEMK+  +  + +TYN +I G+    +  +   ML   +  G IP   
Sbjct: 483 AKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMM 542

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+N+II+GF   G +  A   + +M EK   P+I+T    + G CR G  + ALK     
Sbjct: 543 TYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDV 602

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             +G   D V YN LI+  C+E  +  A  LL  + +  L P+   Y ++ T       +
Sbjct: 603 RRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMM 662

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +E  KF   M++ G      +  +TS           +Y+  I+     G    AL+++ 
Sbjct: 663 KEVSKFYESMIKGG------IVADTS-----------TYTTLIDGFSKDGNVAFALELYS 705

Query: 507 ETRQKGIAINKSTYMNLMNGLIK 529
           E   KG   +  T+  L +GL +
Sbjct: 706 EMMAKGYIPDAFTFTALTHGLCR 728



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 215/456 (47%), Gaps = 18/456 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M     +PD+ +   L+         ++A  L  EM       D   ++ L++   + G 
Sbjct: 148 MVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGM 207

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A +L DE+    I P+   + + I   CK G   +A +++R M+E GF     TY T
Sbjct: 208 HEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRT 267

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++D   K G MEEA R+ D M   G KM+ I   T++   C  +++  A  L     K G
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDG 327

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
               +V YG LI G  +     +A +L  +M  + ++PSTF  + ++ GL    + + A+
Sbjct: 328 IVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAV 387

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  E+  SG +PD  T+N +IH  C   ++ +AL   ++M +   KP I T N LL G 
Sbjct: 388 CLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGY 446

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C++G +++A+K +    ++G   + VTY TL+     ++  ++A+ LL EM++  +  + 
Sbjct: 447 CKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCND 506

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           YTY  +   +    R+ E        +  G I                 P+ ++Y+  IN
Sbjct: 507 YTYNVLINGICMVDRVCEVDGMLKSFMSEGFI-----------------PTMMTYNSIIN 549

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                G    A  ++++ R+KG+  N  TY + ++G
Sbjct: 550 GFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 246/529 (46%), Gaps = 24/529 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLS---DMKKQGLVPNRTTYNILVSGYCK 57
           M   G +PD     +  D L +  + +  +D L+   +M+ +G   +   ++ L+S   K
Sbjct: 148 MVARGVVPD---IKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            G  ++A+R+ D M   +  PD   Y + I   C  G    A R+ +EM+ +       T
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y T+++   ++GR  EA ++ DE+ + G K + +    +++ YC   ++  A  + +   
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           ++G  P  V Y  LI    + G  ++A+ +   M  +GL  +T  L+ +L  L  +++  
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  L    +  G   D  +Y  LI  + +  K   AL L+D MK+  + PS  TYN+++
Sbjct: 385 DAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  + G  ++A+ + +E+   G  P+  T+ T++ G+ ++   + A    ++M +    
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVS 503

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            +  T N+L++G+C    + +     +S++ +G     +TYN++I+   K   +  AF +
Sbjct: 504 CNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTV 563

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             +M EK L P+  TY +       +G  + A K  + +   G                 
Sbjct: 564 YQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG----------------- 606

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           + P  ++Y+  IN  C +G    ALQ+     + G+A N   Y +L+ G
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITG 655



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 2/265 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF  +P  +TYN+I++   K G +     +   M+++GL PN  TY   + GYC+ G  
Sbjct: 535 EGF--IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS 592

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A+++++ + +    PD+  YN LING+C  G +  A +L   +    L P+ V YN+L
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +       E  K  + + + GI  +  T+  +I  + K+G +  A ++   M   G+
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD  T+  L    C++G+++ A ++++ M R  ++ N    N +++    + KL EA+ 
Sbjct: 713 IPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772

Query: 242 LLNSASKRGYYLDEVSYGTLITGYF 266
           L +     G   D+ +Y  L++  F
Sbjct: 773 LHDEMLNMGIQPDDTTYDILVSKKF 797



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 155/357 (43%), Gaps = 18/357 (5%)

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           +M   G  PD  +   L+    +  + ++A  +   M  +G +++    + ++     E 
Sbjct: 147 HMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEG 206

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
             ++A  L +         D+  Y   IT   +     RAL++  EMKE       FTY 
Sbjct: 207 MHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYR 266

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            M+  L ++G+ E+A+ + +E+  +G   D     T++ G+C   +V  AL    + ++ 
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKD 326

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P  V   +L+ G  + G+ +KA +  R    +G    +   + ++  L  +RR +DA
Sbjct: 327 GIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDA 386

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L  EM +  L PD +TY  +     ++ +L EA      M + G              
Sbjct: 387 VCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG-------------- 431

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
              + PS  +Y+  +  +C +G   +A++++ E   +G   N  TY+ LM G I ++
Sbjct: 432 ---VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKK 485


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 265/590 (44%), Gaps = 89/590 (15%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P  V +  ++    K+GK+ E   +  +M   G   N      L+ GYCK G 
Sbjct: 285 MRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGD 344

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ + D M +N   P+  TY ++I   C  G +++A+ +  +M++  + P V   N+
Sbjct: 345 LDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNS 404

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + ++    EA KL DE    GI  N  T+N ++ W CKEGK+ +AC I   M   G
Sbjct: 405 LIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKG 463

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V+YN +I  +C+ G+M+ A  +   M  KGLK N IT                  
Sbjct: 464 VRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLIT------------------ 505

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                            Y  L+ GYF+      A  L+D M+   I PS FT N +I GL
Sbjct: 506 -----------------YSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGL 548

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+T ++ D L +L+Q G IP   T+N II GF  EG V  AL  + +M +    P++
Sbjct: 549 CKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNV 608

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L++G C+   ++ ALK       KG  +D   Y  LI   C++  + +A  LLSE
Sbjct: 609 FTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSE 668

Query: 421 MEEKKLGPDRYTY--------------AAIH---------------------TALVESGR 445
           ++E  L P++  Y              AA+H                     + L++ G+
Sbjct: 669 LQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728

Query: 446 LEEAQKFTSIMVETG----KINHQVV---------QPNTSKTPEEID-----PSSISYSE 487
           L  A +  + M+  G     I + V+           N  K  E++D     P+   Y+ 
Sbjct: 729 LLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNT 788

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            I  H  +G  ++A ++  E   KG+  + +TY  L+NG +K     S A
Sbjct: 789 LITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSGA 838



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 247/532 (46%), Gaps = 18/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D  T + ++ A  ++GKL E      + K +G+  +   Y+I++   CK   
Sbjct: 215 MASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPD 274

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ ++  M     +P    +  +I      G + EA +++ EM S     +VV   T
Sbjct: 275 SVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATT 334

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  + + G    A +L D+++E+GI PN VT+ ++I+W CK G +DKA +I   M+   
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKD 394

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP     N+LI    KA + EEA ++ D     G+  N  T N++L  LC E K+ EA 
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEAC 453

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     ++G     VSY  +I G+ +    + A  ++ EM E+ + P+  TY+ ++ G 
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G TE A  + + +    + P + T N II+G C  G+  ++     K+V++ F P  
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++ G  +EG +  AL  +      G + +  TY  LI+  CK   ++ A  ++ E
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDE 633

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+ K +  D   Y A+       G +  A +  S + E G                 + P
Sbjct: 634 MKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG-----------------LSP 676

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + + YS  I+        + AL + +    +GI  +   Y  L++GL+K  K
Sbjct: 677 NKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 242/522 (46%), Gaps = 18/522 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D+  +N +L++  K  ++N+  D  + + ++ +VP  T  NI +S   K   ++EA  V 
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M       D  T +++I      G LEEA    +E ++  +  D   Y+ +I    + 
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
             S+ A  L+ E+ + G  P+ V    +I    K+GK+ +A K+   M   G   + V  
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVA 332

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            TL+   CK G+++ A  + D M   G+  N +T   I+   C    +D+AY + N    
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +       +  +LI GY +      A KL+DE     I  + FTYN+++  L + GK  +
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSE 451

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +  ++++ G+ P   ++N +I G C +G ++ A     +M+EK  KP+++T ++L+ 
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD 511

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G  ++G  E A   +     +  A    T N +I+ LCK  R  ++   L ++ ++   P
Sbjct: 512 GYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIP 571

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
              TY  I    V+ G +  A    + M + G                 + P+  +Y+  
Sbjct: 572 TCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG-----------------VSPNVFTYTNL 614

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           IN  C       AL++ +E + KGI ++ + Y  L++G  ++
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRK 656



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 237/501 (47%), Gaps = 18/501 (3%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           V  L+   ++     +   +N L++ Y K   + +A+   + + +   +P +   N+ ++
Sbjct: 138 VARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLS 197

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                 M+ EA  +  +M S  +  D  T + +I      G+  EA     E    G++ 
Sbjct: 198 ELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVEL 257

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +A  ++I+I+  CK+     A  ++R M + G+ P  V +  +I    K G M EA ++ 
Sbjct: 258 DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVK 317

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M   G  MN +   T++   C +  LD A  L +  ++ G   + V+Y  +I    ++
Sbjct: 318 GEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKN 377

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              ++A +++++MK + I P+ F  N++I G  ++   E+A  + +E +  G I +  T+
Sbjct: 378 GNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTY 436

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N+++   C EG++ +A     KMV K  +P +V+ N ++ G C++G ++ A   F   + 
Sbjct: 437 NSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLE 496

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG   + +TY+ L+    K+   E AFGL   M  + + P  +T   I   L ++GR  E
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSE 556

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           +Q     +V+ G I                 P+ ++Y+  I+    +G    AL ++ E 
Sbjct: 557 SQDRLKKLVQEGFI-----------------PTCMTYNCIIDGFVKEGSVNSALAVYTEM 599

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
            + G++ N  TY NL+NG  K
Sbjct: 600 CKIGVSPNVFTYTNLINGFCK 620



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 197/443 (44%), Gaps = 34/443 (7%)

Query: 102 LRKEMESLKLLPDVVTYNT--------LINRFFESG----RSMEAFKLIDELDEHGIKPN 149
           L K +++L +L  ++T +T        L+NRF         S+   +LI+       + +
Sbjct: 94  LIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESD 153

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           +   N ++  Y K  +I+ A     ++ E    P     N  +    K   + EA  + +
Sbjct: 154 SRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYN 213

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M  KG+K +  T++ ++     E KL+EA      A  +G  LD  +Y  +I    +  
Sbjct: 214 KMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKP 273

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
            +  AL L  EM+++  +P    +  +I    + GK  +A+ +  E+L  G   +     
Sbjct: 274 DSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVAT 333

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G+C +G ++ AL+  +KM E    P+ VT  +++   C+ G ++KA + +    +K
Sbjct: 334 TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQ--MK 391

Query: 390 GKAVDSVTY--NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            K +    +  N+LI    K R  E+A  L  E     +  + +TY ++ + L + G++ 
Sbjct: 392 NKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMS 450

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA      MV  G                 + PS +SY+  I  HC QG    A  +F E
Sbjct: 451 EACSIWEKMVRKG-----------------VRPSVVSYNNMILGHCQQGDMDSANGVFVE 493

Query: 508 TRQKGIAINKSTYMNLMNGLIKR 530
             +KG+  N  TY  LM+G  K+
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKK 516



 Score = 38.5 bits (88), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 17/142 (11%)

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           DS  +N L++S  K +R+ DA    + + EK + P         + LV++  + EA+   
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + M   G                 +     + S  I     +G+ ++A   F E + KG+
Sbjct: 213 NKMASKG-----------------VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGV 255

Query: 514 AINKSTYMNLMNGLIKRRKSIS 535
            ++   Y  ++  + K+  S++
Sbjct: 256 ELDARAYSIVIEAVCKKPDSVA 277


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 254/500 (50%), Gaps = 18/500 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y T+LD L K       R +L  M ++G+  +   ++ ++  Y + G L+ A+R++
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            LM +    PD+   N  I        LE+A R  + M+   + PD+V+YN LI  + + 
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVT 187
            R  +A +LI E+   G  P+ V++  ++ + CK+ K+++  +++ NM +N    PD VT
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVT 375

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI A  K G+ ++A   +     KG  ++ +  + ++ + C  K +D+A  L+    
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY 435

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D V+Y  +I G+ R  K + A K+  +M +    P+T TY  ++ GL  +GK+ 
Sbjct: 436 SKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSL 495

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A +M+N   +    P+  T++ ++HG   EG++ +A     +M+EK F P+ V  N+L+
Sbjct: 496 EAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLI 555

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LCR   +  A K+    + KG AV+ V + ++I   C+   L+ A  +L +M      
Sbjct: 556 QSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKH 615

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +  AL +  RL+EA +    M+  G                 IDP+ ++Y  
Sbjct: 616 PDAITYTTLFDALGKKSRLDEASELIVKMLGKG-----------------IDPTPVTYRA 658

Query: 488 KINEHCSQGRYKDALQIFEE 507
            I+  C  GR  D +++ E+
Sbjct: 659 VIHRFCQWGRVDDMMKLLEK 678



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 226/461 (49%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD    NT +  L K  KL +    L  MK  G+ P+  +YN L+ GYC +  
Sbjct: 258 MQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHR 317

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           + +A+ ++  M      PD  +Y  ++   C    +EE  RL + M ++  L+PD VTYN
Sbjct: 318 IDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYN 377

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI    + G + +A   + E +E G   + V ++ ++  +CK   IDKA  +V +M   
Sbjct: 378 TLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSK 437

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD VTY  +ID  C+ G ++EA +M+  M + G K NT+T   +L+ LC   K  EA
Sbjct: 438 GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA 497

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++Y  ++ G  R+ K + A  L  EM E+  +P+    N +I  
Sbjct: 498 REMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQS 557

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++     A   L E L  G   +   F ++I+GFC  G ++ AL     M   +  PD
Sbjct: 558 LCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPD 617

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +T   L   L ++  L++A +     + KG     VTY  +I   C+  R++D   LL 
Sbjct: 618 AITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLE 677

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M  ++  P +  Y  +   L   G  EEA+K    ++ T 
Sbjct: 678 KMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTA 716



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 200/417 (47%), Gaps = 33/417 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD VTYNT++ AL K G  ++    L + +++G   ++  Y+ +V  +CK   + +A  
Sbjct: 370 IPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKS 429

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +V  M      PDV TY  +I+G+C  G ++EA ++ ++M      P+ VTY  L+N   
Sbjct: 430 LVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLC 489

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +G+S+EA ++I+  +EH   PNA+T++ ++    +EGK+ +AC + R M E GF P+ V
Sbjct: 490 HNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPV 549

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
             N LI + C+  N+  A + ++    KG  +N +   ++++  C    LD A  +L   
Sbjct: 550 DINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDM 609

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI-----WG-- 299
                + D ++Y TL     +  + + A +L  +M  + I P+  TY A+I     WG  
Sbjct: 610 YLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRV 669

Query: 300 --------------------------LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
                                     L   G  E+A  +L ++L++    D  T + +I 
Sbjct: 670 DDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIE 729

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
            +  +G    A +   +M  ++  PD+  C  +   L  +G+  +A      ++ +G
Sbjct: 730 SYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERG 786



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 192/417 (46%), Gaps = 18/417 (4%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D + Y T+++   ++     A +++  +   GI+ +    + ++  Y + G +  A +I+
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M++ G  PD    NT I    K   +E+A R ++ M   G++ + ++ N ++   C  
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFT 292
            ++D+A  L+     +G   D+VSY T++    +D K     +L + M +   ++P   T
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVT 375

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I+ LS+ G  + A+  L E  + G   D+  ++ ++  FC    ++KA      M 
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY 435

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K   PD+VT   ++ G CR G +++A K  +     G   ++VTY  L++ LC   +  
Sbjct: 436 SKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSL 495

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +A  +++  EE    P+  TY+A+   L   G+L EA   T  M+E G +          
Sbjct: 496 EAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFL---------- 545

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  P+ +  +  I   C       A +  EE   KG A+N   + +++ G  +
Sbjct: 546 -------PNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQ 595



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 168/360 (46%), Gaps = 19/360 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D + Y T++D   K    + A R++ +M R+G++ +    + ++ +      L  A 
Sbjct: 193 YRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNAL 252

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K G   D     T I    +  K  +AL+  + MK   I P   +YN +I G 
Sbjct: 253 RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGY 312

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPD 359
               + + A++++ E+   G  PD+ ++ T++   C + +VE+  +    MV+ S   PD
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPD 372

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+  L + G  + AL F R    KG  +D V Y+ ++ S CK + ++ A  L+ 
Sbjct: 373 QVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVI 432

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +M  K   PD  TY AI       G+++EA+K    M + G       +PNT        
Sbjct: 433 DMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHG------CKPNT-------- 478

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              ++Y+  +N  C  G+  +A ++   + +     N  TY  +M+GL +R   +S+A D
Sbjct: 479 ---VTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGL-RREGKLSEACD 534



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 152/350 (43%), Gaps = 33/350 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY  I+D   + GK++E + +L  M K G  PN  TY +L++G C  G   EA
Sbjct: 438 GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA 497

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++++  ++   P+  TY+ +++G    G L EA  L +EM     LP+ V  N LI  
Sbjct: 498 REMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQS 557

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +   + A K ++E    G   N V    +I  +C+ G +D A  ++ +M  +   PD
Sbjct: 558 LCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPD 617

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD------- 237
            +TY TL DA  K   ++EA  ++  M  KG+    +T   ++H  C   ++D       
Sbjct: 618 AITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLE 677

Query: 238 --------------------------EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                                     EA  LL    +    LD  +   LI  Y  D  A
Sbjct: 678 KMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNA 737

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
             A K+  +M  R ++P       +   L   G   +A D++   ++ G+
Sbjct: 738 LSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGI 787


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 228/430 (53%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G  PD ++Y+T+++   + G+L++V  L+  MK++GL PN   Y  ++   C++  
Sbjct: 715  MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 774

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA      M +   LPD   Y  LI+G+C  G +  A +   EM S  + PDV+TY  
Sbjct: 775  LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +I+ F + G  +EA KL  E+   G++P++VT   +I  YCK G +  A ++  +M + G
Sbjct: 835  IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             SP+ VTY TLID  CK G+++ A  ++  M + GL+ N  T N+I++ LC    ++EA 
Sbjct: 895  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+      G   D V+Y TL+  Y +  + ++A ++  EM  + + P+  T+N ++ G 
Sbjct: 955  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               G  E    +LN +L  G+ P+ TTFN+++  +C    ++ A   +  M  +   PD 
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074

Query: 361  VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             T   L+ G C+   +++A   F+    KG +V   TY+ LI    K ++  +A  +  +
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134

Query: 421  MEEKKLGPDR 430
            M  + L  D+
Sbjct: 1135 MRREGLAADK 1144



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 250/489 (51%), Gaps = 17/489 (3%)

Query: 32   LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
            +  +  + G+  N  +YNI++   C+LG +KEA  ++ LM      PDV +Y+ ++NG+C
Sbjct: 676  VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735

Query: 92   NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
              G L++ ++L + M+   L P+   Y ++I       +  EA +   E+   GI P+ V
Sbjct: 736  RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795

Query: 152  THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             +  +I  +CK G I  A K    M     +PD +TY  +I   C+ G+M EA ++   M
Sbjct: 796  VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855

Query: 212  GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              KGL+ +++T   +++  C    + +A+ + N   + G   + V+Y TLI G  ++   
Sbjct: 856  FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915

Query: 272  NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            + A +L  EM +  + P+ FTYN+++ GL +SG  E+A+ ++ E   +G+  D  T+ T+
Sbjct: 916  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975

Query: 332  IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
            +  +C  G+++KA +   +M+ K  +P IVT N+L++G C  G+LE   K     + KG 
Sbjct: 976  MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035

Query: 392  AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            A ++ T+N+L+   C    L+ A  +  +M  + +GPD  TY  +     ++  ++EA  
Sbjct: 1036 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 1095

Query: 452  FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
                M   G                    S  +YS  I     + ++ +A ++F++ R++
Sbjct: 1096 LFQEMKGKG-----------------FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138

Query: 512  GIAINKSTY 520
            G+A +K  +
Sbjct: 1139 GLAADKEIF 1147



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 247/501 (49%), Gaps = 30/501 (5%)

Query: 60   WLKEAMRVVDLMTQNKSL---------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
            W +  + V D   Q   L          D   +++      + G+L EA R+ ++M +  
Sbjct: 589  WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 648

Query: 111  LLPDVVTYNTLINRFF-ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
            L+  V + N  + R   +  ++  A  +  E  E G+  N  ++NI+I + C+ G+I +A
Sbjct: 649  LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 708

Query: 170  CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
              ++  ME  G++PD ++Y+T+++  C+ G +++ +++++VM RKGLK N+    +I+  
Sbjct: 709  HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 768

Query: 230  LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            LC   KL EA    +   ++G   D V Y TLI G+ +      A K + EM  R I P 
Sbjct: 769  LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 828

Query: 290  TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
              TY A+I G  Q G   +A  + +E+   G+ PD  TF  +I+G+C  G ++ A + HN
Sbjct: 829  VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 888

Query: 350  KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
             M++    P++VT   L+ GLC+EG L+ A +        G   +  TYN++++ LCK  
Sbjct: 889  HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948

Query: 410  RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
             +E+A  L+ E E   L  D  TY  +  A  +SG +++AQ+    M+  G +   +V  
Sbjct: 949  NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTF 1007

Query: 470  NTSKT-------------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
            N                        + I P++ +++  + ++C +   K A  I+++   
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067

Query: 511  KGIAINKSTYMNLMNGLIKRR 531
            +G+  +  TY NL+ G  K R
Sbjct: 1068 RGVGPDGKTYENLVKGHCKAR 1088



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 226/449 (50%)

Query: 12   TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            +YN ++  + + G++ E   LL  M+ +G  P+  +Y+ +V+GYC+ G L +  +++++M
Sbjct: 691  SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750

Query: 72   TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             +    P+ + Y  +I   C    L EA     EM    +LPD V Y TLI+ F + G  
Sbjct: 751  KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810

Query: 132  MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
              A K   E+    I P+ +T+  +I  +C+ G + +A K+   M   G  PD VT+  L
Sbjct: 811  RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870

Query: 192  IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
            I+  CKAG+M++AFR+ + M + G   N +T  T++  LC E  LD A  LL+   K G 
Sbjct: 871  INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930

Query: 252  YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
              +  +Y +++ G  +      A+KL  E +   +   T TY  ++    +SG+ ++A +
Sbjct: 931  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990

Query: 312  MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
            +L E+L  G+ P   TFN +++GFC  G +E   +  N M+ K   P+  T N L+   C
Sbjct: 991  ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050

Query: 372  REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
                L+ A   ++    +G   D  TY  L+   CK R +++A+ L  EM+ K       
Sbjct: 1051 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 1110

Query: 432  TYAAIHTALVESGRLEEAQKFTSIMVETG 460
            TY+ +    ++  +  EA++    M   G
Sbjct: 1111 TYSVLIKGFLKRKKFLEAREVFDQMRREG 1139



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 149/283 (52%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC P+ VTY T++D L K+G L+   +LL +M K GL PN  TYN +V+G CK G ++EA
Sbjct: 894  GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++V          D  TY  L++ +C +G +++A  + KEM    L P +VT+N L+N 
Sbjct: 954  VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F   G   +  KL++ +   GI PNA T N ++K YC    +  A  I ++M   G  PD
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              TY  L+  +CKA NM+EA+ +   M  KG  ++  T + ++      KK  EA  + +
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
               + G   D+  +       ++ ++ +  +   DE+ E  ++
Sbjct: 1134 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 253/534 (47%), Gaps = 53/534 (9%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D+   + ++G  P+  T N L+S   K    ++   V  +M++  + PDV+++  +IN  
Sbjct: 195 DVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEG-ACPDVFSFTNVINAL 253

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C  G +E A  L  +ME L + P+VVTYN +IN   ++GR   AF+L +++   G++PN 
Sbjct: 254 CKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNL 313

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
            T+  +I    K    DK   ++  M  +GF+P+ V +N LID  CK GN+E A ++ DV
Sbjct: 314 KTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDV 373

Query: 211 MGRKGLKMNTITLNT-----------------------------------ILHTLCCEKK 235
           M  K +   ++TL +                                   ++H LC + +
Sbjct: 374 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR 433

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
              A+        R +   ++    L+ G  +D K   A +LW  + E+    S  T NA
Sbjct: 434 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 493

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL  +GK  +A  ++ E+L+ G+  D  T+N +I GFC+EG+VE   +   +M ++ 
Sbjct: 494 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 553

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +PDI T N LL GLC  G L+ A+K +  +   G   +  TY  ++   CK  R+ED  
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            L +E+  KK+  +   Y  I  A  ++G +  A +    M   G               
Sbjct: 614 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG--------------- 658

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I P+  +YS  I+  C+ G  +DA  + +E R++G   N   Y  L+ G  K
Sbjct: 659 --ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 257/529 (48%), Gaps = 17/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYN I++ L + G+L+   +L   M  +G+ PN  TY  L++G  KL +
Sbjct: 269 MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNF 328

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   V+D M  +   P+V  +N LI+G+C  G +E A +++  M S  + P  VT  +
Sbjct: 329 FDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS 388

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F +S +   A   ++E+   G+  +      ++ W CK+ +   A +  + M    
Sbjct: 389 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 448

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P  +    L+   CK G   EA  +   +  KG   + +T N ++H LC   KL EA 
Sbjct: 449 FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 508

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++    +RG  +D ++Y  LI G+  + K     +L +EM +R I P  +TYN ++ GL
Sbjct: 509 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 568

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              GK + AI + +E   SG+I +  T+  ++ G+C   ++E      N+++ K  + + 
Sbjct: 569 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 628

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  NI++   C+ G +  AL+   +   KG   +  TY++LI  +C    +EDA  L+ E
Sbjct: 629 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 688

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++   P+   Y A+     + G+++ A+   S  +E    N              I P
Sbjct: 689 MRKEGFVPNVVCYTALIGGYCKLGQMDTAE---STWLEMISFN--------------IHP 731

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +Y+  I+ +C  G  + A  +  + ++ GI  +  TY  L NG  K
Sbjct: 732 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 780



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 227/491 (46%), Gaps = 35/491 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  +++ L K    ++V  +L +M   G  PN   +N L+ GYCK+G ++ A
Sbjct: 308 GVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGA 367

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA------------------------- 99
           +++ D+M      P   T   L+ G+C +  +E A                         
Sbjct: 368 LKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHW 427

Query: 100 ----------FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                     FR  K M S    P  +    L+    + G+ +EA +L   L E G   +
Sbjct: 428 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 487

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT N +I   C  GK+ +A +IV+ M E G   D +TYN LI   C  G +E  FR+ +
Sbjct: 488 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 547

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M ++G++ +  T N +L  LC   KLD+A  L +     G   +  +YG ++ GY +  
Sbjct: 548 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 607

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +      L++E+  +++  ++  YN +I    Q+G    A+ +L  +   G++P+  T++
Sbjct: 608 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 667

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++IHG C+ G VE A    ++M ++ F P++V    L+ G C+ G ++ A   +   I  
Sbjct: 668 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 727

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
               +  TY  +I   CK   +E A  LL +M+E  + PD  TY  +     ++  ++ A
Sbjct: 728 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 787

Query: 450 QKFTSIMVETG 460
            K    M   G
Sbjct: 788 FKVCDQMATEG 798



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 193/363 (53%), Gaps = 2/363 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P ++    ++  L K GK  E  +L   + ++G   ++ T N L+ G C  G L EA R+
Sbjct: 451 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI 510

Query: 68  VDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V  M + + LP D  TYN LI G+CN G +E  FRLR+EM    + PD+ TYN L+    
Sbjct: 511 VKEMLE-RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLC 569

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+  +A KL DE    G+  N  T+ IM++ YCK  +I+    +   +       + +
Sbjct: 570 NVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSI 629

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN +I A+C+ GN+  A ++++ M  KG+  N  T ++++H +C    +++A  L++  
Sbjct: 630 VYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM 689

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G+  + V Y  LI GY +  + + A   W EM    I P+ FTY  MI G  + G  
Sbjct: 690 RKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNM 749

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A ++L ++ +SG++PD  T+N + +GFC    ++ A +  ++M  +    D +T   L
Sbjct: 750 EKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTL 809

Query: 367 LSG 369
           + G
Sbjct: 810 VHG 812



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 194/400 (48%), Gaps = 2/400 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G    PDN    +++  L KK + +        M  +   P+     +LV G CK G   
Sbjct: 413 GLSIHPDNCY--SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHL 470

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA  +   + +  S     T N LI+G C AG L EA R+ KEM    L  D +TYN LI
Sbjct: 471 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 530

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             F   G+    F+L +E+ + GI+P+  T+N +++  C  GK+D A K+    + +G  
Sbjct: 531 LGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 590

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            +  TY  +++  CKA  +E+   + + +  K +++N+I  N I+   C    +  A  L
Sbjct: 591 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 650

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L +   +G   +  +Y +LI G         A  L DEM++   +P+   Y A+I G  +
Sbjct: 651 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ + A     E++   + P++ T+  +I G+C  G +EKA     KM E    PD+VT
Sbjct: 711 LGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVT 770

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            N+L +G C+   ++ A K       +G  VD +TY TL+
Sbjct: 771 YNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 176/325 (54%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VT N ++  L   GKL E   ++ +M ++GL  +R TYN L+ G+C  G ++   R+ + 
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           MT+    PD++TYN L+ G CN G L++A +L  E ++  L+ ++ TY  ++  + ++ R
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +   L +EL    ++ N++ +NI+IK +C+ G +  A +++ NM+  G  P+C TY++
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C  G +E+A  ++D M ++G   N +    ++   C   ++D A           
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 728

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            + ++ +Y  +I GY +     +A  L  +MKE  I+P   TYN +  G  ++   + A 
Sbjct: 729 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 788

Query: 311 DMLNELLQSGMIPDETTFNTIIHGF 335
            + +++   G+  DE T+ T++HG+
Sbjct: 789 KVCDQMATEGLPVDEITYTTLVHGW 813



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 204/424 (48%), Gaps = 24/424 (5%)

Query: 112 LPDVVTYNTLINRFFESG---RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
            P + T N L++   ++    +  E F+++ E    G  P+  +   +I   CK GK++ 
Sbjct: 206 FPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE----GACPDVFSFTNVINALCKGGKMEN 261

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A ++   ME+ G SP+ VTYN +I+  C+ G ++ AF + + M  KG++ N  T   +++
Sbjct: 262 AIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALIN 321

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            L      D+   +L+     G+  + V +  LI GY +      ALK+ D M  + I P
Sbjct: 322 GLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITP 381

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           ++ T  +++ G  +S + E A + L E+L SG+        +++H  C + +   A +F 
Sbjct: 382 TSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFT 441

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             M+ ++F+P  +   +L+ GLC++G   +A + +   + KG     VT N LI  LC  
Sbjct: 442 KMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGA 501

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            +L +A  ++ EM E+ L  DR TY A+       G++E   +    M + G        
Sbjct: 502 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG-------- 553

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    I P   +Y+  +   C+ G+  DA+++++E +  G+  N  TY  +M G  
Sbjct: 554 ---------IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYC 604

Query: 529 KRRK 532
           K  +
Sbjct: 605 KANR 608



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 135/261 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN +L  L   GKL++   L  + K  GL+ N  TY I++ GYCK   +++ 
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + +   K   +   YN++I   C  G +  A +L + M+S  +LP+  TY++LI+ 
Sbjct: 613 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 672

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   +A  LIDE+ + G  PN V +  +I  YCK G++D A      M      P+
Sbjct: 673 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 732

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  +ID  CK GNME+A  ++  M   G+  + +T N + +  C    +D A+ + +
Sbjct: 733 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 792

Query: 245 SASKRGYYLDEVSYGTLITGY 265
             +  G  +DE++Y TL+ G+
Sbjct: 793 QMATEGLPVDEITYTTLVHGW 813



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 34/230 (14%)

Query: 327 TFNTIIHGFCSEGQ---VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            F+ +IH + ++ +      A+     +  K   P + TCN LLS L +    EK  + F
Sbjct: 173 AFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF 232

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           R  + +G   D  ++  +I++LCK  ++E+A  L  +ME+  + P+  TY  I   L ++
Sbjct: 233 RV-MSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQN 291

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI------------------------D 479
           GRL+ A +    M   G      VQPN       I                        +
Sbjct: 292 GRLDNAFELKEKMTVKG------VQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFN 345

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           P+ + ++  I+ +C  G  + AL+I +    K I     T  +LM G  K
Sbjct: 346 PNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 395



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P+  TY  ++D   K G + +  +LL  MK+ G+VP+  TYN+L +G+CK   
Sbjct: 724 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 783

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           +  A +V D M       D  TY  L++GW
Sbjct: 784 MDNAFKVCDQMATEGLPVDEITYTTLVHGW 813


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 170/560 (30%), Positives = 274/560 (48%), Gaps = 55/560 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   T+N ++ +L +    +    L   M ++G  PN  T  ILV G C+ G +K+A+ +
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 68  VDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V+    N S  + +   YN L++ +C   M  EA RL + M  L +LPDVVT+N+ I+  
Sbjct: 208 VN---NNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISAL 264

Query: 126 FESGRSMEAFKLIDELD---EHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
             +G+ MEA ++  ++    E G+ +PN VT N+M+K +CK G +  A  +V  M++ G 
Sbjct: 265 CRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGN 324

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
                 YN  +    + G + EA  ++D M  KG++ N  T N ++  LC    L +A  
Sbjct: 325 FDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG 384

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L++   + G Y D V+Y TL+ GY    K   A  +  EM      P+T+T N ++  L 
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM-------VEK 354
           + G+T +A +ML ++ +    PD  T N +++G C  G+++KA +  ++M       ++K
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 355 --SFK-------------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
             SF              PD +T   L++GLC+ G LE+A K F   + K    DSVTY+
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           T I S CK+ ++  AF +L +ME         TY A+   L  + ++ E       M E 
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 I P   +Y+  I   C  G+ KDA+ +  E   KGI+ N S+
Sbjct: 625 G-----------------ISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSS 667

Query: 520 YMNLMNGLIKRRKSISKAVD 539
           +  L+       K+ SK+ D
Sbjct: 668 FKILI-------KAFSKSSD 680



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 240/468 (51%), Gaps = 23/468 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN  L  L + G+L E R +L +M  +G+ PN  TYNI++ G C+   L +A  ++DLM 
Sbjct: 331 YNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMM 390

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +N   PD   Y+ L++G+C+ G + EA  +  EM      P+  T NTL++  ++ GR++
Sbjct: 391 RNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS---------- 182
           EA +++ +++E   +P+ VT NI++   C+ G++DKA +IV  M  NG +          
Sbjct: 451 EAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFAS 510

Query: 183 ------------PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
                       PD +TY TLI+  CK G +EEA +    M  K L+ +++T +T + + 
Sbjct: 511 LINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSF 570

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C + K+  A+ +L    + G      +Y  LI G   + +      L DEMKE+ I P  
Sbjct: 571 CKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDI 630

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TYN +I  L + GK + AI +L+E+L  G+ P+ ++F  +I  F      + A +    
Sbjct: 631 CTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEV 690

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
            +    + + +  +++ + L   G L +A + F   + +   + +  Y  LI+ LC++ R
Sbjct: 691 ALNICGRKEALY-SLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDER 749

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           L DA  LL ++ +K  G D  ++  +   L + G   +A +    M+E
Sbjct: 750 LADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMME 797



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 263/553 (47%), Gaps = 52/553 (9%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           + + V YNT++    ++   NE   L+  M + G++P+  T+N  +S  C+ G + EA R
Sbjct: 216 IANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASR 275

Query: 67  VVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +   M  +  L    P+V T+N+++ G+C  GM+ +A  L + M+ +     +  YN  +
Sbjct: 276 IFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWL 335

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                +G  +EA  ++DE+   GI+PNA T+NIM+   C+   +  A  ++  M  NG  
Sbjct: 336 MGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVY 395

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD V Y+TL+   C  G + EA  ++  M R G + NT T NT+LH+L  E +  EA  +
Sbjct: 396 PDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEM 455

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW--GL 300
           L   +++ Y  D V+   ++ G  R+ + ++A ++  EM                W  G 
Sbjct: 456 LQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM----------------WTNGP 499

Query: 301 SQSGKTEQAIDMLNELLQ-SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           +   K      ++N +   S  +PD  T+ T+I+G C  G++E+A +   +M+ K+ +PD
Sbjct: 500 TSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPD 559

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT +  +   C++G +  A +  +     G +    TYN LI  L    ++ + +GL  
Sbjct: 560 SVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKD 619

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM+EK + PD  TY  I T L E G+ ++A      M++ G      + PN S     I 
Sbjct: 620 EMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKG------ISPNVSSFKILIK 673

Query: 480 PSSIS-----------------------YSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
             S S                       YS   NE  + G+  +A ++FE +  + + + 
Sbjct: 674 AFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLK 733

Query: 517 KSTYMNLMNGLIK 529
              Y +L+  L +
Sbjct: 734 NFMYKDLIARLCQ 746



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 175/405 (43%), Gaps = 56/405 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y+T+L     +GK+ E + +L +M + G  PN  T N L+    K G   EA
Sbjct: 393 GVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEA 452

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--------------ESL- 109
             ++  M +    PD  T N+++NG C  G L++A  +  EM               SL 
Sbjct: 453 EEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLI 512

Query: 110 -------KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
                    LPD +TY TLIN   + GR  EA K   E+    ++P++VT++  I  +CK
Sbjct: 513 NSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCK 572

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           +GKI  A +++++ME NG S    TYN LI        + E + + D M  KG+  +  T
Sbjct: 573 QGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICT 632

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD--- 279
            N I+  LC   K  +A  LL+    +G   +  S+  LI  + +      A +L++   
Sbjct: 633 YNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVAL 692

Query: 280 ------------------------EMKE-------RQIMPSTFTYNAMIWGLSQSGKTEQ 308
                                   E KE       R +    F Y  +I  L Q  +   
Sbjct: 693 NICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLAD 752

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           A  +L +L+  G   D  +F  +I G    G   +A +   +M+E
Sbjct: 753 ANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMME 797



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           CLPD +TY T+++ L K G+L E +    +M  + L P+  TY+  +  +CK G +  A 
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           RV+  M +N     + TYN LI G  +   + E + L+ EM+   + PD+ TYN +I   
Sbjct: 581 RVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCL 640

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            E G++ +A  L+ E+ + GI PN  +  I+IK + K      AC++   +  N      
Sbjct: 641 CEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE-VALNICGRKE 699

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             Y+ + +     G + EA  + +V   + L +       ++  LC +++L +A  LL  
Sbjct: 700 ALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYK 759

Query: 246 ASKRGYYLDEVSYGTLITGYFR-------DEKANRALKLWDEMKERQI 286
              +GY  D  S+  +I G  +       DE A R ++L  E+++R +
Sbjct: 760 LIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMEL--ELEDRPV 805



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 176/400 (44%), Gaps = 33/400 (8%)

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN--GFSPDCVTYNTLIDANCKAGNM 201
           H   P+ ++   M++   + G +D A    +++       SP    YN L+ +  +    
Sbjct: 75  HIAHPSLIS---MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRP 131

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
                +   M    +   T T N ++H+LC  +  D A  L     ++G   +E + G L
Sbjct: 132 GFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGIL 191

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ---SGKTEQAIDMLNELLQ 318
           + G  R     +AL+L +     +I  +   YN ++    +   + + E+ ++ +NEL  
Sbjct: 192 VRGLCRAGLVKQALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNEL-- 248

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQ-FHNKMVEKSF---KPDIVTCNILLSGLCREG 374
            G++PD  TFN+ I   C  G+V +A + F +  ++      +P++VT N++L G C+ G
Sbjct: 249 -GVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHG 307

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
           ++  A     +    G       YN  +  L +   L +A  +L EM  K + P+ YTY 
Sbjct: 308 MMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYN 367

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   L  +  L +A+    +M+  G                 + P +++YS  ++ +CS
Sbjct: 368 IMMDGLCRNHMLSDARGLMDLMMRNG-----------------VYPDTVAYSTLLHGYCS 410

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           +G+  +A  +  E  + G   N  T   L++ L K  +++
Sbjct: 411 RGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 21/222 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC     TYN ++  L    ++ E+  L  +MK++G+ P+  TYN +++  C+ G 
Sbjct: 586 MERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGK 645

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG-------MLEEAFRLRKEMESLKLLP 113
            K+A+ ++  M      P+V ++ +LI  +  +        + E A  +    E+L    
Sbjct: 646 AKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL---- 701

Query: 114 DVVTYNTLINRFFESGRSMEAFKLID-ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
               Y+ + N     G+  EA +L +  LD +    N +  +++ +  C++ ++  A  +
Sbjct: 702 ----YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIAR-LCQDERLADANSL 756

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNM----EEAFRMMDV 210
           +  + + G+  D  ++  +ID   K GN     E A RMM++
Sbjct: 757 LYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMEL 798


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 269/537 (50%), Gaps = 17/537 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C PD VT+N +++A    G+     D L  M + G+ P+  T+  ++   C+ G 
Sbjct: 273 MPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGN 332

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++ D +      P+   YN L++G+  A  + +A  L +EM +  + PD VT+N 
Sbjct: 333 VVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNI 392

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+   ++ GR  ++ +L+ +L   G+  ++  +++M+   C  G++D+A K+++ + E G
Sbjct: 393 LVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKG 452

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +   V +N+LI A  +AG  ++AF    +M R G   ++ T N++L  LC +  L EA 
Sbjct: 453 LTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEAR 512

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +LL    ++G+ +++V+Y  L+ GYF+      A  LW EMKER I P    + A+I GL
Sbjct: 513 ILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGL 572

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++G  E+A ++  E+   G +P+   +N++I G C  G+V +AL+   +M +K    D 
Sbjct: 573 SKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDT 632

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ G CR G ++ A++ F      G   D  T+N LI   CK   +  A  ++++
Sbjct: 633 FTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNK 692

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN--TSKTPEEI 478
           M    L PD  TY           ++ +A      ++  G +   V      +    + +
Sbjct: 693 MYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDIL 752

Query: 479 D---------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           D               P+ I+ +  ++  C QG  + AL   ++ R+     ++ +Y
Sbjct: 753 DRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISY 809



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 233/502 (46%), Gaps = 54/502 (10%)

Query: 66  RVVDLMTQNKSL--PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           ++VD M +N ++   D    N L+ G+ N GM  EA  + + M  + + P + +   L+ 
Sbjct: 161 KIVDFMWRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLR 220

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G     +KL  ++   G +P+ +T N MI  +C++ ++     ++  M +   SP
Sbjct: 221 LLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSP 280

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VT+N LI+A C  G    A   + +M R G++ +  T  TILH LC E  + EA  L 
Sbjct: 281 DVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLF 340

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG---- 299
           +     G   +   Y TL+ GYF+  +  +A  L++EM+   + P   T+N ++WG    
Sbjct: 341 DGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400

Query: 300 -------------------------------LSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                                          L  +G+ ++A+ +L ELL+ G+      F
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAF 460

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N++I  +   G  +KA + +  MV   F P   TCN LL GLCR+G L++A       + 
Sbjct: 461 NSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG  ++ V Y  L+    K   LE A  L  EM+E+ + PD   + A+   L ++G +EE
Sbjct: 521 KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEE 580

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A +    M   G +                 P++ +Y+  I   C  GR  +AL++ +E 
Sbjct: 581 AYEVFLEMSAIGFV-----------------PNNFAYNSLIRGLCDCGRVTEALKLEKEM 623

Query: 509 RQKGIAINKSTYMNLMNGLIKR 530
           RQKG+  +  T+  +++G  +R
Sbjct: 624 RQKGLLSDTFTFNIIIDGFCRR 645



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 257/552 (46%), Gaps = 32/552 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   +   +L  L + G    V  L  DM  +G  P+  T+N ++ G+C+   
Sbjct: 203 MRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHR 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     ++ LM +    PDV T+N+LIN  C  G    A      M    + P V T+ T
Sbjct: 263 VVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTT 322

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++     G  +EA KL D + + GI PNA  +N ++  Y K  ++ +A  +   M   G
Sbjct: 323 ILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTG 382

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPDCVT+N L+  + K G +E++ R++  +   GL +++   + ++ +LC   +LDEA 
Sbjct: 383 VSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAM 442

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    ++G  L  V++ +LI  Y R    ++A + +  M      PS+ T N+++ GL
Sbjct: 443 KLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGL 502

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A  +L  +L+ G   ++  +  ++ G+     +E A     +M E+   PD 
Sbjct: 503 CRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDA 562

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V    L+ GL + G +E+A + F      G   ++  YN+LI  LC   R+ +A  L  E
Sbjct: 563 VAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKE 622

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSI------------------------ 455
           M +K L  D +T+  I       G+++ A + F  +                        
Sbjct: 623 MRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFD 682

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           MV  G+I +++           +DP   +Y+  ++ +C   +   A+ I ++    GI  
Sbjct: 683 MVGAGEIVNKMYSCG-------LDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVP 735

Query: 516 NKSTYMNLMNGL 527
           +  TY  +++G+
Sbjct: 736 DTVTYNTMLSGI 747



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 180/367 (49%), Gaps = 36/367 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P + T N++L  L +KG L E R LL  M ++G   N+  Y +L+ GY K+  L+ A
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +    PD   +  LI+G   AG +EEA+ +  EM ++  +P+   YN+LI  
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG 606

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  EA KL  E+ + G+  +  T NI+I  +C+ G++  A +   +M+  G  PD
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LI   CKA +M  A  +++ M   GL  +  T NT +H                
Sbjct: 667 IFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMH---------------- 710

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                              GY R  K N+A+ + D++    I+P T TYN M+ G+  S 
Sbjct: 711 -------------------GYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SD 750

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ +  +LL+ G IP+  T N ++  FC +G  EKAL +  K+ E SF  D ++  
Sbjct: 751 ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYR 810

Query: 365 ILLSGLC 371
           IL    C
Sbjct: 811 ILDQAYC 817


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 229/449 (51%), Gaps = 5/449 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  +T+NT+++ L  +G++ E   L++ M  +GL  +  TY  +V+G CK+G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K A+ ++  M +    PDV  Y+ +I+  C  G   +A  L  EM    + P+V TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F   GR  +A +L+ ++ E  I P+ +T N +I    KEGK+ +A K+   M    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN++I   CK    ++A  M D+M       + +T NTI+   C  K++DE  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 236

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   S+RG   +  +Y TLI G+   +  N A  L+ EM    + P T T N +++G 
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ K E+A+++   +  S +  D   +N IIHG C   +V++A      +     +PD+
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++SG C +  +  A   F      G   D+ TYNTLI    K   ++ +  L+SE
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M       D +T   +   L+  GRL+++
Sbjct: 417 MRSNGFSGDAFTIKMV-ADLITDGRLDKS 444



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 223/425 (52%), Gaps = 4/425 (0%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M + GL P   T+N L++G C  G + EA  +V+ M       DV TY  ++NG C  G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
            + A  L  +ME   + PDVV Y+ +I+R  + G   +A  L  E+ E GI PN  T+N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           MI  +C  G+   A +++R+M E   +PD +T+N LI A+ K G + EA ++ D M  + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  +T+T N++++  C   + D+A  + +  +      D V++ T+I  Y R ++ +  +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 236

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  E+  R ++ +T TYN +I G  +      A D+  E++  G+ PD  T N +++GF
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   ++E+AL+    +       D V  NI++ G+C+   +++A   F S  + G   D 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            TYN +IS  C +  + DA  L  +M++    PD  TY  +    +++G ++++ +  S 
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 456 MVETG 460
           M   G
Sbjct: 417 MRSNG 421



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 223/415 (53%), Gaps = 5/415 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D VTY TI++ + K G      +LLS M++  + P+   Y+ ++   CK G 
Sbjct: 36  MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +   M +    P+V+TYN +I+G+C+ G   +A RL ++M   ++ PDV+T+N 
Sbjct: 96  HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+  EA KL DE+    I P+ VT+N MI  +CK  + D A    ++M +  
Sbjct: 156 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLM 211

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VT+NT+ID  C+A  ++E  +++  + R+GL  NT T NT++H  C    L+ A 
Sbjct: 212 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 271

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D ++   L+ G+  +EK   AL+L++ ++  +I   T  YN +I G+
Sbjct: 272 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 331

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K ++A D+   L   G+ PD  T+N +I GFC +  +  A    +KM +   +PD 
Sbjct: 332 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 391

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            T N L+ G  + G ++K+++        G + D+ T   +++ L  + RL+ +F
Sbjct: 392 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 445



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 188/395 (47%), Gaps = 22/395 (5%)

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           E G+ P  +T N +I   C EG++ +A  +V  M   G   D VTY T+++  CK G+ +
Sbjct: 3   EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 62

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  ++  M    +K + +  + I+  LC +    +A  L +   ++G   +  +Y  +I
Sbjct: 63  SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 122

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+    + + A +L  +M ER+I P   T+NA+I    + GK  +A  + +E+L   + 
Sbjct: 123 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 182

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+N++I+GFC   + + A    + M      PD+VT N ++   CR   +++ ++ 
Sbjct: 183 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQL 238

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            R    +G   ++ TYNTLI   C+   L  A  L  EM    + PD  T   +     E
Sbjct: 239 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 298

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
           + +LEEA +             +V+Q +      +ID  +++Y+  I+  C   +  +A 
Sbjct: 299 NEKLEEALEL-----------FEVIQMS------KIDLDTVAYNIIIHGMCKGSKVDEAW 341

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            +F      G+  +  TY  +++G    + +IS A
Sbjct: 342 DLFCSLPIHGVEPDVQTYNVMISGFCG-KSAISDA 375



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 162/308 (52%), Gaps = 6/308 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +T+N ++ A  K+GKL E   L  +M  + + P+  TYN ++ G+CK     +A  +
Sbjct: 148 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 207

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            DLM      PDV T+N +I+ +C A  ++E  +L +E+    L+ +  TYNTLI+ F E
Sbjct: 208 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 263

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                 A  L  E+  HG+ P+ +T NI++  +C+  K+++A ++   ++ +    D V 
Sbjct: 264 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 323

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I   CK   ++EA+ +   +   G++ +  T N ++   C +  + +A +L +   
Sbjct: 324 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 383

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+  D  +Y TLI G  +  + +++++L  EM+        FT   M+  L   G+ +
Sbjct: 384 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLD 442

Query: 308 QAI-DMLN 314
           ++  DML+
Sbjct: 443 KSFSDMLS 450



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 17/182 (9%)

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           MVE    P ++T N L++GLC EG + +A       + KG  +D VTY T+++ +CK   
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
            + A  LLS+MEE  + PD   Y+AI   L + G   +AQ   S M+E G          
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG---------- 110

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  I P+  +Y+  I+  CS GR+ DA ++  +  ++ I  +  T+  L++  +K 
Sbjct: 111 -------IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 163

Query: 531 RK 532
            K
Sbjct: 164 GK 165


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 251/524 (47%), Gaps = 55/524 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWLKEAM 65
           P  VTYNT+LD+  K+G+ +E   LL +M+ QG   + N  TYN+++S   + G L+ A 
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++VD M  +K     +TYN LI      G +++   L+ EME+  ++P +VTYN +I+  
Sbjct: 301 KLVDSMRLSKK-ASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL 359

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +S +   A     E+   G+ P+ +T+N M+  YCK G + +A  ++ ++   G +P  
Sbjct: 360 LKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTV 419

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TYNTLID  C+ G +EEA R+ + M  +G   +  T   +++     + L  A    + 
Sbjct: 420 LTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDE 479

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +G   D  +Y T I         ++A +L + M  + I P T TYN +I GL ++G 
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A D+  +++  G+ PD  T+  +IH  C  G + +A +  N MV    +P +VT  I
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+   CR G L  A  +FR  +  G   + +TYN LI +LC+  R   A+    EM E+ 
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P++YTY  +                                                 
Sbjct: 660 LAPNKYTYTLL------------------------------------------------- 670

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              I+ +C +G + DA++++ E  Q GI  +  T+  L  G  K
Sbjct: 671 ---IDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK 711



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/352 (34%), Positives = 184/352 (52%), Gaps = 1/352 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD +TYN++L+   K G L E   LL D+++ GL P   TYN L+ GYC+LG 
Sbjct: 375 MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGG 434

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA R+ + M +    PDV TY +L+NG      L  A     EM S  L PD   YNT
Sbjct: 435 LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I      G + +AF+L + +   GI P+ VT+N++I   CK G +  A  +   M  +G
Sbjct: 495 RICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDG 554

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PDC+TY  LI A+C+ G + EA ++++ M   GL+ + +T   ++HT C    L  AY
Sbjct: 555 LQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAY 614

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G   +E++Y  LI    R  +   A   + EM ER + P+ +TY  +I G 
Sbjct: 615 GWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGN 674

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
            + G    AI +  E+ Q+G+ PD  T N +  GF  +G +  A+++   +V
Sbjct: 675 CREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DKGHMYHAIEYLENIV 725



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 199/388 (51%), Gaps = 1/388 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VTYN I+  L K  ++   +   ++M+  GL+P+  TYN +++GYCK G 
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA+ ++  + +    P V TYN LI+G+C  G LEEA RL++EM      PDV TY  
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   +      A +  DE+   G++P+   +N  I      G   KA ++   M   G
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKG 519

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN +ID  CK GN+++A  +   M   GL+ + IT   ++H  C    L EA 
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEAR 579

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN     G     V+Y  LI    R      A   + +M +  I P+  TYN +I  L
Sbjct: 580 KLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 639

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+T  A    +E+L+ G+ P++ T+  +I G C EG    A++ + +M +    PD 
Sbjct: 640 CRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDY 699

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL 388
            T N L  G   +G +  A+++  + +L
Sbjct: 700 CTHNALFKGF-DKGHMYHAIEYLENIVL 726



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 230/472 (48%), Gaps = 27/472 (5%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           PDV   N ++    +A   ++   + +EM  L++ P +VTYNTL++ F + GR  EA  L
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASML 265

Query: 138 IDELDEHG--IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           + E++  G     N VT+N++I +  +EG ++ A K+V +M  +       TYN LI A 
Sbjct: 266 LKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLITAL 324

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
            + G +++   +   M  +G+    +T N I+H L   ++++ A +        G   D 
Sbjct: 325 LERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDL 384

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           ++Y +++ GY +      AL L  +++   + P+  TYN +I G  + G  E+A  +  E
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +++ G  PD  T+  +++G      +  A +F ++M+ K  +PD    N   + +C E I
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN---TRICAELI 501

Query: 376 L---EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           L    KA +     +LKG   D+VTYN +I  LCK   L+DA  L  +M    L PD  T
Sbjct: 502 LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT 561

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPE------------ 476
           Y  +  A  E G L EA+K  + MV  G     + + ++     +               
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML 621

Query: 477 --EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
              I+P+ I+Y+  I+  C  GR   A   F E  ++G+A NK TY  L++G
Sbjct: 622 DVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDG 673


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 228/430 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD ++Y+T+++   + G+L++V  L+  MK++GL PN   Y  ++   C++  
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA      M +   LPD   Y  LI+G+C  G +  A +   EM S  + PDV+TY  
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F + G  +EA KL  E+   G++P++VT   +I  YCK G +  A ++  +M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ VTY TLID  CK G+++ A  ++  M + GL+ N  T N+I++ LC    ++EA 
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+      G   D V+Y TL+  Y +  + ++A ++  EM  + + P+  T+N ++ G 
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  E    +LN +L  G+ P+ TTFN+++  +C    ++ A   +  M  +   PD 
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ G C+   +++A   F+    KG +V   TY+ LI    K ++  +A  +  +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691

Query: 421 MEEKKLGPDR 430
           M  + L  D+
Sbjct: 692 MRREGLAADK 701



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 250/489 (51%), Gaps = 17/489 (3%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           +  +  + G+  N  +YNI++   C+LG +KEA  ++ LM      PDV +Y+ ++NG+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G L++ ++L + M+   L P+   Y ++I       +  EA +   E+   GI P+ V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +  +I  +CK G I  A K    M     +PD +TY  +I   C+ G+M EA ++   M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KGL+ +++T   +++  C    + +A+ + N   + G   + V+Y TLI G  ++   
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A +L  EM +  + P+ FTYN+++ GL +SG  E+A+ ++ E   +G+  D  T+ T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +  +C  G+++KA +   +M+ K  +P IVT N+L++G C  G+LE   K     + KG 
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           A ++ T+N+L+   C    L+ A  +  +M  + +GPD  TY  +     ++  ++EA  
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G                    S  +YS  I     + ++ +A ++F++ R++
Sbjct: 653 LFQEMKGKG-----------------FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

Query: 512 GIAINKSTY 520
           G+A +K  +
Sbjct: 696 GLAADKEIF 704



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 247/501 (49%), Gaps = 30/501 (5%)

Query: 60  WLKEAMRVVDLMTQNKSL---------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           W +  + V D   Q   L          D   +++      + G+L EA R+ ++M +  
Sbjct: 146 WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 205

Query: 111 LLPDVVTYNTLINRFF-ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
           L+  V + N  + R   +  ++  A  +  E  E G+  N  ++NI+I + C+ G+I +A
Sbjct: 206 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 265

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
             ++  ME  G++PD ++Y+T+++  C+ G +++ +++++VM RKGLK N+    +I+  
Sbjct: 266 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           LC   KL EA    +   ++G   D V Y TLI G+ +      A K + EM  R I P 
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TY A+I G  Q G   +A  + +E+   G+ PD  TF  +I+G+C  G ++ A + HN
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M++    P++VT   L+ GLC+EG L+ A +        G   +  TYN++++ LCK  
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            +E+A  L+ E E   L  D  TY  +  A  +SG +++AQ+    M+  G +   +V  
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTF 564

Query: 470 NTSKT-------------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           N                        + I P++ +++  + ++C +   K A  I+++   
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 511 KGIAINKSTYMNLMNGLIKRR 531
           +G+  +  TY NL+ G  K R
Sbjct: 625 RGVGPDGKTYENLVKGHCKAR 645



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 226/449 (50%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN ++  + + G++ E   LL  M+ +G  P+  +Y+ +V+GYC+ G L +  +++++M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    P+ + Y  +I   C    L EA     EM    +LPD V Y TLI+ F + G  
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A K   E+    I P+ +T+  +I  +C+ G + +A K+   M   G  PD VT+  L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+  CKAG+M++AFR+ + M + G   N +T  T++  LC E  LD A  LL+   K G 
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y +++ G  +      A+KL  E +   +   T TY  ++    +SG+ ++A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L E+L  G+ P   TFN +++GFC  G +E   +  N M+ K   P+  T N L+   C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
               L+ A   ++    +G   D  TY  L+   CK R +++A+ L  EM+ K       
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY+ +    ++  +  EA++    M   G
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREG 696



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 149/283 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY T++D L K+G L+   +LL +M K GL PN  TYN +V+G CK G ++EA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +++V          D  TY  L++ +C +G +++A  + KEM    L P +VT+N L+N 
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G   +  KL++ +   GI PNA T N ++K YC    +  A  I ++M   G  PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  L+  +CKA NM+EA+ +   M  KG  ++  T + ++      KK  EA  + +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
              + G   D+  +       ++ ++ +  +   DE+ E  ++
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 236/454 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +N IL ++ K         L   M  +G+ P+  T +IL++ YC LG +  A  
Sbjct: 75  LPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFS 134

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+ ++ +     +  T   ++ G C  G + +A      + +   L D VTY TLIN   
Sbjct: 135 VLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLC 194

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G + EAF+L+ +++   ++PN V +N+++   CK+G + +A  +  ++   G  PD  
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY  LI   C  G   E  R++  M  + + +N  T N ++  LC +  L +A+ + N  
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +RG   D V++ TL++GY        A KL+D   E  I P  ++YN +I G  ++ + 
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A+ + N++    + P+  T++++I G C  G++  A +  + + +    P+++T NI+
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L  LC+  +++KA++ F     +G   +  +YN LI+  CK +R+++A  L  EM  + L
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNL 494

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            PD  TY  +   L +SGR+  A +  ++M + G
Sbjct: 495 VPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 225/436 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VT + +++     G +     +L  + K+G   N  T   ++ G C  G +++A
Sbjct: 108 GITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKA 167

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   D +     L D  TY  LING C  G+  EAF L  +ME   + P+VV YN +++ 
Sbjct: 168 LEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDG 227

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA  L  ++   GI P+  T+  +I  +C  G+  +  +++ +M +   + +
Sbjct: 228 LCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLN 287

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LIDA CK G + +A  M ++M  +G + + +T NT++   C    + EA  L +
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFD 347

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + ++ G   D  SY  LI GY ++ + + AL L+++M  +++ P+  TY+++I GL +SG
Sbjct: 348 TFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSG 407

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A ++ + +   G  P+  T+N ++   C    V+KA++  N M E+   P++ + N
Sbjct: 408 RISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYN 467

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL++G C+   +++A+  F     +    DSVTYN LI  LCK  R+  A+ L + M + 
Sbjct: 468 ILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDG 527

Query: 425 KLGPDRYTYAAIHTAL 440
               D  TY  +  A 
Sbjct: 528 GPPVDVITYNILFDAF 543



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 191/336 (56%), Gaps = 2/336 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG    P+ V YN I+D L K G + E RDL SD+  +G+ P+  TY  L+ G+C LG 
Sbjct: 209 MEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQ 268

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            +E  R++ D++ +N +L +V+TYN+LI+  C  GML +A  +R  M      PD+VT+N
Sbjct: 269 WREVTRLLCDMVDRNVNL-NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFN 327

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++ +      +EA KL D   E GI P+  ++NI+I  YCK  +ID+A  +   M   
Sbjct: 328 TLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYK 387

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P+ VTY++LID  CK+G +  A+ +   +   G   N IT N +L  LC  + +D+A
Sbjct: 388 KLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKA 447

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L N   +RG   +  SY  LI GY + ++ + A+ L++EM  R ++P + TYN +I G
Sbjct: 448 IELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDG 507

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           L +SG+   A ++ N +   G   D  T+N +   F
Sbjct: 508 LCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAF 543



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 208/397 (52%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           +T  TI+  L   G++ +  +    +  QG + +  TY  L++G CK+G  +EA  ++  
Sbjct: 149 ITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHK 208

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P+V  YNM+++G C  G++ EA  L  ++    + PDV TY  LI+ F   G+
Sbjct: 209 MEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQ 268

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             E  +L+ ++ +  +  N  T+NI+I   CK+G + KA  +   M E G  PD VT+NT
Sbjct: 269 WREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNT 328

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+   C   ++ EA ++ D     G+  +  + N ++   C   ++DEA  L N  + + 
Sbjct: 329 LMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK 388

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V+Y +LI G  +  + + A +L+  + +    P+  TYN M+  L +    ++AI
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAI 448

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++ N + + G+ P+ +++N +I+G+C   ++++A+    +M  ++  PD VT N L+ GL
Sbjct: 449 ELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGL 508

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           C+ G +  A + F      G  VD +TYN L  +  K
Sbjct: 509 CKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 230/492 (46%), Gaps = 18/492 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   +     LP V  +NM++           A  L K+M    + P +VT + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +   G    AF ++  + + G + NA+T   ++K  C  G++ KA +   ++   G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F  D VTY TLI+  CK G   EAF ++  M  + ++ N +  N I+  LC +  + EA 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    RG   D  +Y  LI G+    +     +L  +M +R +  + +TYN +I  L
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G   +A DM N +++ G  PD  TFNT++ G+C    V +A +  +   E    PD+
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + NIL+ G C+   +++AL  F     K  A + VTY++LI  LCK  R+  A+ L S 
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---KINHQVVQPNTSKTPEE 477
           + +    P+  TY  +  AL +   +++A +  ++M E G    ++   +  N     + 
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 478 ID---------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
           ID               P S++Y+  I+  C  GR   A ++F      G  ++  TY  
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538

Query: 523 LMNGLIKRRKSI 534
           L +   K +  I
Sbjct: 539 LFDAFSKIQHVI 550



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 31/52 (59%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           +PD+VTYN ++D L K G+++   +L + M   G   +  TYNIL   + K+
Sbjct: 495 VPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 230/473 (48%), Gaps = 35/473 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N +++ L  +G   +   L+  M+K G  P   TYN ++  YCK G  K A+ +
Sbjct: 191 PDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M       DV TYNMLI+  C +    + + L ++M    + P+ VTYNTL+N F  
Sbjct: 251 LDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSN 310

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+ + A +L++E+   G+ PN VT N +I  +  EG   +A K+   ME  G     V+
Sbjct: 311 EGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVS 370

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CK    + A      M R G+ +  IT   ++  LC    LDEA ++LN  S
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMS 430

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRA--------------------------------- 274
           K G   D V+Y  LI G+ R  +   A                                 
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 275 --LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             +++++ M      P  FT+N ++  L ++GK  +A + +  +   G++P+  +F+ +I
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLI 550

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G+ S G+  KA    ++M +    P   T   LL GLC+ G L  A KF +S      A
Sbjct: 551 NGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAA 610

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
           VD+V  NTLI+++CK   L+ A  L  EM ++ + PD +TY ++ + L   G+
Sbjct: 611 VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGK 663



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 262/531 (49%), Gaps = 17/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  P   T N IL ++ K  +   V   L +M K+ + P+  T+NIL++  C  G  K+
Sbjct: 152 YGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKK 211

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +  ++  M ++   P + TYN +++ +C  G  + A  L   M    +  DV TYN LI+
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIH 271

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               S RS + + L+ ++ +  I PN VT+N ++  +  EGK+  A +++  M   G SP
Sbjct: 272 DLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSP 331

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VT+N LID +   GN +EA +M  +M  KGL    ++   +L  LC   + D A    
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFY 391

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G  +  ++Y  +I G  ++   + A+ + +EM +  I P   TY+A+I G  + 
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRV 451

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + A +++  + + G+ P+   ++T+I+  C  G +++ ++ +  M+ +   PD  T 
Sbjct: 452 GRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTF 511

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+L++ LC+ G + +A +F R     G   ++V+++ LI+          AF +  EM +
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTK 571

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P  +TY ++   L + G L  A+KF                 +    P  +D  ++
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLIAAEKFLK---------------SLQNVPAAVD--TV 614

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             +  I   C  G    A+ +F E  Q+ I  +  TY +L++GL ++ K++
Sbjct: 615 MCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTV 665



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/551 (26%), Positives = 255/551 (46%), Gaps = 25/551 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +   V+Y  +LD L K  + +  R     MK+ G+   R TY  ++ G CK G+
Sbjct: 359 MEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +++ M+++   PD+ TY+ LING+C  G L+ A  +   +  + L P+ + Y+T
Sbjct: 419 LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G   E  ++ + +   G  P+  T N+++   CK GK+ +A + +R M  +G
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V+++ LI+    +G   +AF + D M + G      T  ++L  LC    L  A 
Sbjct: 539 ILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAE 598

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L S       +D V   TLIT   +    ++A+ L+ EM +R I+P +FTY ++I GL
Sbjct: 599 KFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGL 658

Query: 301 SQSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + GKT  AI    E    G ++P++  +   + G    GQ +    F  +M +     D
Sbjct: 659 CRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRD 718

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT N ++ G  R G +EK          + +  +  TYN L+    K + +  +F L  
Sbjct: 719 VVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYR 778

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPEEI 478
            M    + PD+ T  +I   + ES  LE   K     +  G +++        SK     
Sbjct: 779 SMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCAN- 837

Query: 479 DPSSISYS-EKINEHCSQG-------------------RYKDALQIFEETRQKGIAINKS 518
               I+++ + +N   S G                   R++++  +  E  ++GI+    
Sbjct: 838 --GEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESR 895

Query: 519 TYMNLMNGLIK 529
            Y+ L+NGL +
Sbjct: 896 KYIGLLNGLCR 906



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/625 (24%), Positives = 279/625 (44%), Gaps = 99/625 (15%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD VTY+ +++   + G+L   ++++  + + GL PN   Y+ L+   C++G LKE 
Sbjct: 433  GIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKET 492

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +R+ + M    + PD +T+N+L+   C AG + EA    + M S  +LP+ V+++ LIN 
Sbjct: 493  IRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLING 552

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +  SG  ++AF + DE+ + G  P   T+  ++K  CK G +  A K +++++    + D
Sbjct: 553  YGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVD 612

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             V  NTLI A CK+GN+++A  +   M ++ +  ++ T  +++  LC + K   A +   
Sbjct: 613  TVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAK 672

Query: 245  SASKR-------------------------GYYL-----------DEVSYGTLITGYFRD 268
             A  R                         G+Y            D V+   +I GY R 
Sbjct: 673  EAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRM 732

Query: 269  EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
             K  +   L  EM  +   P+  TYN ++ G S+      +  +   ++ SG++PD+ T 
Sbjct: 733  GKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTC 792

Query: 329  NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG-------------- 374
             +II G C    +E  L+     + +  + D  T N+L+S  C  G              
Sbjct: 793  YSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTS 852

Query: 375  ---------------ILEKALKFFRSWIL------KGKAVDSVTYNTLISSLCKERRLED 413
                           +L +  +F  S ++      +G + +S  Y  L++ LC+   ++ 
Sbjct: 853  LGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKT 912

Query: 414  AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ----------------KFTSIM- 456
            AF +  EM   K+ P     +A+  AL + G+ +EA                  FT++M 
Sbjct: 913  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMH 972

Query: 457  --VETGKINH----QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
               + G +      +VV  N       +    +SY+  I   C++G    A ++FEE ++
Sbjct: 973  LFCKNGNVTEALELRVVMSNCG-----LKLDLVSYNVLITGLCAKGDMAIAFELFEEMKR 1027

Query: 511  KGIAINKSTYMNLMNGLIKRRKSIS 535
             G   N +TY  L+ G++ +    S
Sbjct: 1028 DGFLANVTTYKALVGGILSQGTEFS 1052



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 25/399 (6%)

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F  G  M  ++L +         N    +I+I+ Y +EG I  + +I R M   GF+P  
Sbjct: 107 FVFGALMATYRLCNS--------NPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSV 158

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            T N ++ +  K+      +  +  M ++ +  +  T N +++ LC E    ++  L+  
Sbjct: 159 YTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQK 218

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K GY    V+Y T++  Y +  +   A++L D M  + +     TYN +I  L +S +
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNR 278

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           + +   +L ++ +  + P+E T+NT+++GF +EG+V  A Q  N+M+     P+ VT N 
Sbjct: 279 SAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNA 338

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G   EG  ++ALK F     KG     V+Y  L+  LCK    + A G    M+   
Sbjct: 339 LIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           +   R TY  +   L ++G L+EA    + M + G                 IDP  ++Y
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDG-----------------IDPDIVTY 441

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           S  IN  C  GR K A +I     + G++ N   Y  L+
Sbjct: 442 SALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI 480



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 200/476 (42%), Gaps = 71/476 (14%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  P   TY ++L  L K G L      L  ++      +    N L++  CK G 
Sbjct: 569  MTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGN 628

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYN 119
            L +A+ +   M Q   LPD +TY  LI+G C  G    A    KE E+   L+P+ V Y 
Sbjct: 629  LDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYT 688

Query: 120  TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
              ++  F++G+    F    ++D+ G+  + VT N MI  Y + GKI+K   ++  M   
Sbjct: 689  CFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQ 748

Query: 180  GFSPDCVTYNTLIDAN-----------------------------------CKAGNMEEA 204
               P+  TYN L+                                      C++  +E  
Sbjct: 749  NQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIG 808

Query: 205  FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +++     +G++++  T N ++   C   +++ A+ ++N  +  G  LD+ +   +++ 
Sbjct: 809  LKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSV 868

Query: 265  YFRDEKANRALKLWDEMKERQIMPSTFTY------------------------------- 293
              R+ +   +  +  EM ++ I P +  Y                               
Sbjct: 869  LNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPP 928

Query: 294  ----NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
                +AM+  L++ GK ++A  +L  +L+  ++P   +F T++H FC  G V +AL+   
Sbjct: 929  NVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRV 988

Query: 350  KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
             M     K D+V+ N+L++GLC +G +  A + F      G   +  TY  L+  +
Sbjct: 989  VMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGI 1044



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 159/339 (46%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G   D VT N ++D   + GK+ +  DLL +M  Q   PN TTYNIL+ GY K   
Sbjct: 710  MDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKH 769

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  +  +   M  +  LPD  T   +I G C + MLE   ++ K      +  D  T+N 
Sbjct: 770  VSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNM 829

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI++   +G    AF +++ +   GI  +  T + ++    +  +  ++  ++  M + G
Sbjct: 830  LISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQG 889

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             SP+   Y  L++  C+ G+++ AF + + M    +    +  + ++  L    K DEA 
Sbjct: 890  ISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAS 949

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +LL S  K        S+ TL+  + ++     AL+L   M    +     +YN +I GL
Sbjct: 950  LLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
               G    A ++  E+ + G + + TT+  ++ G  S+G
Sbjct: 1010 CAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQG 1048


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 265/525 (50%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  + YN IL  L +KGK+ E   +L  MK     PN T+YNIL+   CK G L+ A
Sbjct: 372 GCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAA 430

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V D M +    P++ T N++I+  C A  L+EA  +   ++     PD VT+ +LI+ 
Sbjct: 431 LKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDG 490

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A+ L +++ + G  PNAV +  +I+ + K G+ +   KI + M   G SPD
Sbjct: 491 LGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD 550

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +  N  +D   KAG +E+   + + +  +GL  +  + + ++H L       + Y L  
Sbjct: 551 LMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFY 610

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G +LD  +Y  +I G+ +  K N+A +L +EMK + + P+  TY ++I GL++  
Sbjct: 611 EMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKID 670

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E     +  +   ++++I GF   G++++A     ++++K   P+  T N
Sbjct: 671 RLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWN 730

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   +++AL  F++        + VTY+ +++ LCK R+   AF    EM+++
Sbjct: 731 CLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQ 790

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY  + + L   G + EA+        +G I                 P S  
Sbjct: 791 GLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGI-----------------PDSAC 833

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    +  +  DA  +FEETR KG  I   T + L++ L K
Sbjct: 834 YNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHK 878



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 278/581 (47%), Gaps = 58/581 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V YN  +D   K GK++       ++K QGLVP+  T+  ++   CK   + EA+ + 
Sbjct: 271 DLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELF 330

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + +  NKS+P V+ YN +I G+ + G   EA+ L +  +    +P V+ YN ++      
Sbjct: 331 EELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRK 390

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  EA ++++ + +    PN  ++NI+I   CK G+++ A K+  +M+E G  P+ +T 
Sbjct: 391 GKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITV 449

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N +ID  CKA  ++EA  +   +  K    +++T  +++  L    K+++AYML      
Sbjct: 450 NIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLD 509

Query: 249 RGYYLDEVSYGTLITGYF---RDEKANRALK----------------------------- 276
            G   + V Y +LI  +F   R E  ++  K                             
Sbjct: 510 SGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEK 569

Query: 277 ---LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
              L++E+K + + P   +Y+ +I GL + G ++    +  E+ + G+  D   +N +I 
Sbjct: 570 GRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVID 629

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           GFC  G+V KA Q   +M  K  +P +VT   ++ GL +   L++A   F     K KAV
Sbjct: 630 GFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA--KSKAV 687

Query: 394 D--SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-- 449
           D   V Y++LI    K  R+++A+ +L E+ +K L P+ YT+  +  ALV++  ++EA  
Sbjct: 688 DLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALV 747

Query: 450 --QKFTSIMVETGKINHQVVQPNTSKT--------------PEEIDPSSISYSEKINEHC 493
             Q   ++     ++ + ++     K                + + P++I+Y+  I+   
Sbjct: 748 CFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLA 807

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             G   +A  +FE  +  G   + + Y  ++ GL    K++
Sbjct: 808 RVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAM 848



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 250/563 (44%), Gaps = 51/563 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P    Y T++ AL    + + +  LL  M++ G       +  L+  + + G 
Sbjct: 193 MRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGR 252

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++D M  N    D+  YN+ I+ +   G ++ A++   E++S  L+PD VT+ +
Sbjct: 253 VDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTS 312

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    ++ R  EA +L +ELD +   P    +N MI  Y   GK ++A  ++   +  G
Sbjct: 313 MIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMM-------------------------------- 208
             P  + YN ++    + G +EEA R++                                
Sbjct: 373 CIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 209 --DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             D M   GL  N IT+N ++  LC  ++LDEA  +      +    D V++ +LI G  
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R  K N A  L+++M +    P+   Y ++I    + G+ E    +  E++  G  PD  
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
             N  +      G++EK      ++  +   PD+ + +IL+ GL + G  +   K F   
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             +G  +D+  YN +I   CK  ++  A+ LL EM+ K L P   TY ++   L +  RL
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +EA              + + +   SK    +D + + YS  I+     GR  +A  I E
Sbjct: 673 DEA--------------YMLFEEAKSKA---VDLNVVVYSSLIDGFGKVGRIDEAYLILE 715

Query: 507 ETRQKGIAINKSTYMNLMNGLIK 529
           E  QKG+  N  T+  L++ L+K
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVK 738



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 239/536 (44%), Gaps = 19/536 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YN +L  + +   L  +  +L +M   G  P+  T   +V+ + K   L+EA  V++ M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y  LI     A   +    L ++M+ +     V  + TLI  F   GR 
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+  +    + V +N+ I  + K GK+D A K    ++  G  PD VT+ ++
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CKA  ++EA  + + +            NT++       K +EAY LL    ++G 
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               ++Y  ++T   R  K   AL++ + MK     P+  +YN +I  L ++G+ E A+ 
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + + ++G+ P+  T N +I   C   ++++A      +  K   PD VT   L+ GL 
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD-- 429
           R G +  A   +   +  G+  ++V Y +LI +  K  R ED   +  EM  +   PD  
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 430 ---RYTYAAIHTALVESGR--LEE--AQKFTSIMVETGKINHQVVQPNTSKTP------- 475
               Y         +E GR   EE  AQ  T  +     + H +V+   SK         
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 476 --EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + +   + +Y+  I+  C  G+   A Q+ EE + KG+     TY ++++GL K
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAK 668



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 220/481 (45%), Gaps = 31/481 (6%)

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           + K L     YN L+        LE   ++ +EM      P   T   ++  F +S +  
Sbjct: 125 KTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLR 184

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EAF +I+ + +   +P    +  +I       + D    ++R M+E G+      + TLI
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE-----KKLDEAYMLLNSAS 247
               + G ++ A  ++D M     K N+   + +L+ +C +      K+D A+   +   
Sbjct: 245 CVFAREGRVDAALSLLDEM-----KSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELK 299

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D+V++ ++I    + E+ + A++L++E+   + +P  + YN MI G    GK  
Sbjct: 300 SQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFN 359

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L    + G IP    +N I+     +G+VE+AL+    M +    P++ + NIL+
Sbjct: 360 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILI 418

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+ G LE ALK   S    G   + +T N +I  LCK +RL++A  +   ++ K   
Sbjct: 419 DMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCT 478

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP----NTSKTPEEIDPSSI 483
           PD  T+ ++   L   G++ +A      M+++G+  + VV      N  K   + D   I
Sbjct: 479 PDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKI 538

Query: 484 SYSEKINEHCS---------------QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
            Y E ++  CS                G  +    +FEE + +G+  +  +Y  L++GL+
Sbjct: 539 -YKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLV 597

Query: 529 K 529
           K
Sbjct: 598 K 598


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/579 (27%), Positives = 258/579 (44%), Gaps = 72/579 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   T+N +L     +G +     LL  M K G+ P+  +YNIL+ G+C  GW
Sbjct: 209 MTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGW 268

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A ++ + M ++   P V TYN+L++  C+ G + EA RL  EM  + +  + +T+N 
Sbjct: 269 SRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNV 328

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI------------------------- 155
           LI+ + +SG+  +A     E+   G+ P++ T NI                         
Sbjct: 329 LIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHM 388

Query: 156 -------MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
                  ++   C + ++D A +++    E G       +N LI A  K G  EEA  + 
Sbjct: 389 SADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELY 448

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
            +M + GL  ++ T N ++  LC + +LDEA +LL     +GY L   S+   +  YFRD
Sbjct: 449 RIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL-STSFTICLDAYFRD 507

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
             A  ALK WD+M    +      ++A I GL +     +A     E+   G++P+  T+
Sbjct: 508 GNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITY 567

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N+II   C  G + +AL+    M +    PDI T NIL+ GLCREG L+           
Sbjct: 568 NSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCS 627

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D+VTYNT+I++ C+ + +  A   +++M      PD +TY     +L  +  L +
Sbjct: 628 NGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQ 687

Query: 449 AQKFTS----------------------------IMVETGKINHQVVQPNTSKTPEEIDP 480
           A K                                M+ TG++     +PNT         
Sbjct: 688 AGKLLDELVAVDCSPNSVTYNTLMDGICSDVLDRAMILTGRLIKMAFKPNT--------- 738

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             I+ +  ++  C QG    AL   E+ R+     + +T
Sbjct: 739 --ITLNVFLSHFCKQGFGNRALMWAEKLREDSFVFDGAT 775



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 242/509 (47%), Gaps = 21/509 (4%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           F+ G++    ++  +M  +G  P+  T+N ++ G+C  G ++ A  ++ +M ++   PDV
Sbjct: 194 FRSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDV 253

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
            +YN+LI G C  G   +AF++ + M      P VVTYN L++     GR  EA +L DE
Sbjct: 254 CSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDE 313

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + + GI+ N +T N++I  Y K G++D+A    R M+  G  PD  T+N +     K G 
Sbjct: 314 MAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGY 373

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
             +     D+       M+   L+ ++  LC + +LD+A+ LL  A ++G  L    +  
Sbjct: 374 AAQLVHDHDMFSS---HMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNA 430

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI  Y ++     A +L+  M +  + PS+ T+N +I GL   G+ ++A  +L  ++  G
Sbjct: 431 LIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 490

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
                T+F   +  +  +G    AL+  + M     + D +  +  ++GLCR   + +A 
Sbjct: 491 YCL-STSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAY 549

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           + F     +G   +++TYN++IS+LCK   + +A  L+  M +  L PD YT   +   L
Sbjct: 550 QAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGL 609

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
              G+L+        M   G                 + P +++Y+  IN +C       
Sbjct: 610 CREGKLKMVDNLLLDMCSNG-----------------LTPDTVTYNTIINAYCRAQDMNS 652

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           A+    +    G   +  TY   M+ L +
Sbjct: 653 AMNFMNKMLVAGCEPDIFTYNIWMHSLCR 681



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 217/470 (46%), Gaps = 30/470 (6%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           + ++ +  AGM  EA  +   +      P +   + L+   F SG    A+ + +E+   
Sbjct: 153 LALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAE 212

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G +P+  T N M+  +C  G +  A  ++  M ++G +PD  +YN LI  +C  G   +A
Sbjct: 213 GPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDA 272

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           F+M + M R G +   +T N ++  LC E ++ EA  L +  ++ G  ++ +++  LI G
Sbjct: 273 FKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDG 332

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           Y +  + ++A   + EM+ R ++P + T+N +     + G   Q +   +++  S M  D
Sbjct: 333 YAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHD-HDMFSSHMSAD 391

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
               + ++   C + +++ A +     +E+     +   N L++   +EG+ E+A + +R
Sbjct: 392 --GLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYR 449

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES- 443
                G A  S T+N LI  LC + RL++A  LL  M  K      Y  +   T  +++ 
Sbjct: 450 IMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG-----YCLSTSFTICLDAY 504

Query: 444 -------GRLEEAQKFTSIMVETGKIN--------------HQVVQPNTSKTPEEIDPSS 482
                  G L+      +I ++T  I               ++  Q     T   I P++
Sbjct: 505 FRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNN 564

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+Y+  I+  C  G   +AL++ +  RQ G+  +  T   L++GL +  K
Sbjct: 565 ITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGK 614



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 15/326 (4%)

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
            L   LH         EA  +L    + G      +   L+   FR  +   A  +++EM
Sbjct: 150 ALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEM 209

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
                 PS  T+NAM+ G    G    A  +L  + +SG+ PD  ++N +I G C  G  
Sbjct: 210 TAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWS 269

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             A +    M     +P +VT NIL+  LC EG + +A + F      G  V+++T+N L
Sbjct: 270 RDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVL 329

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY----AAIHTALVESGRLEEAQKFTSIMV 457
           I    K  +++ A     EM+ + L PD  T+    A  H     +  + +   F+S M 
Sbjct: 330 IDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMS 389

Query: 458 ETGK--------INHQVVQP---NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
             G          +H++            + +      ++  I  +  +G +++A +++ 
Sbjct: 390 ADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYR 449

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
              + G+A + ST+  L+ GL  + +
Sbjct: 450 IMNKLGLAPSSSTFNYLIMGLCNQGR 475


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 219/429 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +N +L ++ K    + +  L   M   G+ P+  T  I+++  C L  +  A   
Sbjct: 43  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+  LI G C  G + EA  L  +M      P+VVTY TLIN   +
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             +  EAF +  E+   GI PN VT+N +I   CK  +      ++  M ++   PD  T
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            NT++DA CK G + EA  ++D+M  +G++ N +T N ++   C   ++D A  + ++  
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +    + +SY TLI GY + +  ++A+ L++EM  +++ P+T TYN +I GL   G+ +
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            AI + +E++  G IPD  T+ T+    C    ++KA+     +   ++ PDI     +L
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G+CR G LE A   F +   KG   +  TYN +I  LCK+  L +A  L SEM +    
Sbjct: 403 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 462

Query: 428 PDRYTYAAI 436
           P+  TY  I
Sbjct: 463 PNDCTYNLI 471



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 263/588 (44%), Gaps = 85/588 (14%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  T NT++DAL K+G + E  D++  M  +G+ PN  TYN L+ G+C    +  A++
Sbjct: 217 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 276

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V D M     + +V +YN LING+C    +++A  L +EM   +L P+ VTYNTLI+   
Sbjct: 277 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 336

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A  L  E+   G  P+ VT+  +  + CK   +DKA  +++ +E + + PD  
Sbjct: 337 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y T++D  C+AG +E+A  +   +  KGL+ N  T N ++H LC +  L EA  L +  
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW-----GLS 301
           +K G   ++ +Y  +  G+ R+ +A R ++L +EM  R       T   ++      GL 
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLD 516

Query: 302 QSGKT-----------------------------------------EQAIDMLNELLQSG 320
           QS K                                          + A+   N +L   
Sbjct: 517 QSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMH 576

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC---REG--- 374
             P    F  ++            L    +M      PD+ T NIL++  C   R G   
Sbjct: 577 PPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAF 636

Query: 375 -ILEKALKF-FRS--------------WILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            +L K LK  F+                I KG + D  TYN+LI +LC     +    LL
Sbjct: 637 SVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 696

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +EM   K+ P+   ++ +  AL + G +  A     +M++ G                 +
Sbjct: 697 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG-----------------V 739

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           +P  ++Y+  ++ HC +    +A+++F+    KG   N  +Y  L+NG
Sbjct: 740 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 787



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 249/558 (44%), Gaps = 35/558 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD  T+ T++  L  +GK+ E   L   M  +G  PN  TY  L++G CK   + E
Sbjct: 109 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTE 168

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M      P++ TYN LI+G C     +    L  EM   K++PDV T NT+++
Sbjct: 169 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 228

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G   EA  ++D +   G++PN VT+N ++  +C   ++D A K+   M       
Sbjct: 229 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 288

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + ++YNTLI+  CK  ++++A  + + M R+ L  NT+T NT++H LC   +L +A  L 
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    RG   D V+Y TL     ++   ++A+ L   ++     P    Y  ++ G+ ++
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E A D+ + L   G+ P+  T+N +IHG C +G + +A +  ++M +    P+  T 
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 468

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS-------------LCKE-- 408
           N++  G  R     + ++     + +G +VD  T   L+               LCK   
Sbjct: 469 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSS 528

Query: 409 ---------RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK------FT 453
                    R L   F   S        P    +  +  AL    R+           FT
Sbjct: 529 SSRPSGTQMRSLPPLFLSSSHNSLHSRSPH---FNTLDDALSSFNRMLHMHPPPSTVDFT 585

Query: 454 SIMVETGKINH--QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
            ++    K+ H   V+  +T      I P   + +  IN  C   R   A  +  +  + 
Sbjct: 586 KLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL 645

Query: 512 GIAINKSTYMNLMNGLIK 529
           G   +  TY  LMNGL K
Sbjct: 646 GFQPDVVTYGTLMNGLCK 663



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 227/491 (46%), Gaps = 21/491 (4%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           +++N   S       L EA+   + M   +  P    +N L+              L ++
Sbjct: 11  SSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 70

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M+S  + PDV T   +IN      R   AF  + ++ + G +P+A T   +I+  C EGK
Sbjct: 71  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           I +A  +   M   GF P+ VTY TLI+  CK   + EAF +   M  KG+  N +T N+
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190

Query: 226 ILHTLC--CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           ++H LC  CE K      L+N         D  +  T++    ++     A  + D M  
Sbjct: 191 LIHGLCKLCEWK--HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R + P+  TYNA++ G     + + A+ + + ++    + +  ++NT+I+G+C    V+K
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A+    +M  +   P+ VT N L+ GLC  G L+ A+  F   + +G+  D VTY TL  
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            LCK R L+ A  LL  +E     PD   Y  I   +  +G LE+A+   S +   G   
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG--- 425

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
              +QPN             +Y+  I+  C QG   +A ++F E  + G + N  TY  +
Sbjct: 426 ---LQPNVW-----------TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 471

Query: 524 MNGLIKRRKSI 534
             G ++  +++
Sbjct: 472 TRGFLRNNEAL 482



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 222/451 (49%), Gaps = 1/451 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T   ++++L    +++     L+ + K G  P+ TT+  L+ G C  G 
Sbjct: 71  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D M      P+V TY  LING C    + EAF +  EM +  + P++VTYN+
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +         L++E+ +  I P+  T N ++   CKEG + +A  +V  M   G
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYN L+D +C    ++ A ++ D M  K    N I+ NT+++  C  + +D+A 
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S++    + V+Y TLI G     +   A+ L+ EM  R  +P   TY  +   L
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++   ++A+ +L  +  S   PD   + TI+ G C  G++E A    + +  K  +P++
Sbjct: 371 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 430

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++ GLC++G+L +A K F      G + +  TYN +     +         LL E
Sbjct: 431 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 490

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           M  +    D  T   +   L + G L+++ K
Sbjct: 491 MLARGFSVDVSTTTLLVGMLSDDG-LDQSVK 520



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 185/377 (49%), Gaps = 13/377 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +  +L ++ K    + V  L + M   G+ P+  T NIL++ +C L  L  A  V
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PDV TY  L+NG C             +M +  + PD+ TYN+LI+    
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCN 685

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                    L++E+    I PN V  + ++   CKEG I  A  +V  M + G  PD VT
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D +C    M+EA ++ D M  KG   N  + N +++  C  +++D+A  LL   S
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D V+Y TLI G     +   A+ L+ EM     +P   TY  ++  L ++    
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +  S +  D   +N  I G C  G++E A    + +  K  +PD+ T NI++
Sbjct: 866 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925

Query: 368 SGLCREGILEKALKFFR 384
            GLC+ G+L++A K FR
Sbjct: 926 HGLCKRGLLDEANKLFR 942



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 197/387 (50%), Gaps = 19/387 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEA 99
           P+   +  L++   K+   K    V+ L TQ  S    PDV+T N+LIN +C+   L  A
Sbjct: 579 PSTVDFTKLLTSIAKM---KHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYA 635

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           F +  ++  L   PDVVTY TL+N            K+I +    GI P+  T+N +I  
Sbjct: 636 FSVLAKLLKLGFQPDVVTYGTLMNGLC---------KMITK----GISPDIFTYNSLIHA 682

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            C   +      ++  M  +   P+ V ++T++DA CK G +  A  ++D+M ++G++ +
Sbjct: 683 LCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD 742

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T   ++   C   ++DEA  + ++   +G   +  SY  LI GY + ++ ++A+ L +
Sbjct: 743 VVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLE 802

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           +M  + ++  T TYN +I GL   G+ + AI + +E++ SG IPD  T+  ++   C   
Sbjct: 803 QMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH 862

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
            + +A+     +   +   DI+  NI + G+CR G LE A   F +   KG   D  TYN
Sbjct: 863 HLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYN 922

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKL 426
            +I  LCK   L++A  L  +M+E  +
Sbjct: 923 IMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 226/519 (43%), Gaps = 74/519 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN ++  L K+G L E   L S+M K G  PN  TYN++  G+ +     EA
Sbjct: 425 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR---NNEA 481

Query: 65  MRVVDL---MTQNKSLPDVWTYNMLINGWCNAGM-------------------------- 95
           +R ++L   M       DV T  +L+    + G+                          
Sbjct: 482 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLP 541

Query: 96  --------------------LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
                               L++A      M  +   P  V +  L+    +        
Sbjct: 542 PLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVL 601

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L  ++D  GI P+  T NI+I  +C   ++  A  ++  + + GF PD VTY TL++  
Sbjct: 602 SLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGL 661

Query: 196 CKA---GNMEEAF-------------------RMMDVMGRKGLKMNTITLNTILHTLCCE 233
           CK    G   + F                    +++ M    +  N +  +T++  LC E
Sbjct: 662 CKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
             +  A+ +++   KRG   D V+Y  L+ G+    + + A+K++D M  +  +P+  +Y
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I G  Q  + ++A+ +L ++   G+I D  T+NT+IHG C  G+++ A+   ++MV 
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               PD+VT  ILL  LC+   L +A+   ++        D + YN  I  +C+   LE 
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           A  L S +  K L PD  TY  +   L + G L+EA K 
Sbjct: 902 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKL 940



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 182/353 (51%), Gaps = 13/353 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T N ++++     +L     +L+ + K G  P+  TY  L++G CK+  
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKM-- 664

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
                     +T+  S PD++TYN LI+  CN    +    L  EM + K++P+VV ++T
Sbjct: 665 ----------ITKGIS-PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 713

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G    A  ++D + + G++P+ VT+  ++  +C   ++D+A K+   M   G
Sbjct: 714 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 773

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  +YN LI+  C+   M++A  +++ M  +GL  +T+T NT++H LC   +L  A 
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 833

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +     G   D V+Y  L+    ++     A+ L   ++   +      YN  I G+
Sbjct: 834 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 893

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            ++G+ E A D+ + L   G+ PD  T+N +IHG C  G +++A +   KM E
Sbjct: 894 CRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 16/320 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN+++ AL    +   V  LL++M    ++PN   ++ +V   CK G +  A
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 727

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             VVD+M +    PDV TY  L++G C    ++EA ++   M     +P+V +YN LIN 
Sbjct: 728 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 787

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +  R  +A  L++++   G+  + VT+N +I   C  G++  A  +   M  +G  PD
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  L+D  CK  ++ EA  ++  +    L  + +  N  +  +C   +L+ A  L +
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 907

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S +G   D  +Y  +I G  +    + A KL+ +M E             IW  S S 
Sbjct: 908 NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND-----------IWSNSTSS 956

Query: 305 KTEQAIDMLNELLQSGMIPD 324
           + ++++     + Q  M+P+
Sbjct: 957 RNQKSL-----IYQKIMLPE 971



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG     D + YN  +D + + G+L   RDL S++  +GL P+  TYNI++ G CK G 
Sbjct: 874 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 933

Query: 61  LKEAMRVVDLMTQNKSLPDVWT 82
           L EA ++   M +N    D+W+
Sbjct: 934 LDEANKLFRKMDEN----DIWS 951


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 239/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +PD VT + +++     G++     +L  + K G  PN    N L+ G C  G 
Sbjct: 36  MEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGE 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+++   D +       D  +Y +L+NG C  G    A +L + +E     PDVV Y+T
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EA+ L  E++  GI P+ +T+  +I  +C  G++ +A  ++  M    
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  TYNTLID  CK G ++E+  ++ VM +KG+K + +  + ++   C   ++ +A 
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAK 275

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     + G   D  SY  +I G  + ++ + A+ L  EM  + ++P T TY+++I GL
Sbjct: 276 QIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGL 335

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+    +D+  E+   G   +  T+N+++ G C    ++KA+    KM E+  +P+ 
Sbjct: 336 CKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNK 395

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ GLC+ G L+K    F+  ++KG  +D  TY  +IS LCKE   ++A  + S+
Sbjct: 396 YTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSK 455

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ME+    P+  T+  I  +L+E    ++A+K    M+  G
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKG 495



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 234/427 (54%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P+ +  NT++  L  KG++ +       +  QG   ++ +Y IL++G CK+G  + 
Sbjct: 74  LGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRC 133

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++  +    + PDV  Y+ +I+G C   +++EA+ L  EM +  + PDV+TY TLI 
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F  +G+ MEAF L++E+    I PN  T+N +I   CKEGK+ ++  ++  M + G  P
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP 253

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V Y+ L+D  C  G +++A ++  VM + G+  +  + N I++ LC  K++DEA  LL
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +    D V+Y +LI G  +  +    L L  EM  R    +  TYN+++ GL ++
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKN 373

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++AI +  ++ + G+ P++ T+  +I G C  G+++K       ++ K +  D+ T 
Sbjct: 374 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTY 433

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +++SGLC+EG+ ++AL         G   ++VT+  +I SL ++   + A  LL EM  
Sbjct: 434 TVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIA 493

Query: 424 KKLGPDR 430
           K L P R
Sbjct: 494 KGLLPFR 500



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 230/455 (50%), Gaps = 17/455 (3%)

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           + +P +  +  ++              L K+ME+  ++PD+VT + LIN F   G+   +
Sbjct: 5   RHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFS 64

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
           F ++ ++ + G +PN +  N ++K  C +G++ K+      +   GF  D V+Y  L++ 
Sbjct: 65  FSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNG 124

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            CK G    A +++  +  +  + + +  +TI+  LC +K +DEAY L +  + RG + D
Sbjct: 125 LCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPD 184

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
            ++Y TLI G+    +   A  L +EM  + I P+ +TYN +I  L + GK +++ ++L 
Sbjct: 185 VITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLA 244

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            + + G+ PD   ++ ++ G+C  G+V+KA Q    MV+    PD+ + NI+++GLC+  
Sbjct: 245 VMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGK 304

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +++A+   R  + K    D+VTY++LI  LCK  R+     L  EM  +    +  TY 
Sbjct: 305 RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN 364

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
           ++   L ++  L++A      M E G                 I P+  +Y+  I+  C 
Sbjct: 365 SLLDGLCKNQNLDKAIALFMKMKERG-----------------IQPNKYTYTALIDGLCK 407

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            GR K    +F+    KG  I+  TY  +++GL K
Sbjct: 408 GGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 219/424 (51%), Gaps = 17/424 (4%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M  L+ +P ++ +  ++    +         L  +++  GI P+ VT +I+I  +C  G+
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +  +  ++  + + G+ P+ +  NTL+   C  G ++++    D +  +G +M+ ++   
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +L+ LC   +   A  LL +   R    D V Y T+I G  +D+  + A  L+ EM  R 
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I P   TY  +I G   +G+  +A  +LNE++   + P+  T+NT+I   C EG+V+++ 
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
                M +K  KPD+V  +IL+ G C  G ++KA + F   +  G   D  +YN +I+ L
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK +R+++A  LL EM  K + PD  TY+++   L + GR+      T+I+  T +++H+
Sbjct: 301 CKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRI------TTILDLTKEMHHR 354

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             QP           + ++Y+  ++  C       A+ +F + +++GI  NK TY  L++
Sbjct: 355 -GQP----------ANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403

Query: 526 GLIK 529
           GL K
Sbjct: 404 GLCK 407



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 180/345 (52%), Gaps = 7/345 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TY T++      G+L E   LL++M  + + PN  TYN L+   CK G 
Sbjct: 176 MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGK 235

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE+  ++ +MT+    PDV  Y++L++G+C  G +++A ++   M    + PDV +YN 
Sbjct: 236 VKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNI 295

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   +  R  EA  L+ E+    + P+ VT++ +I   CK G+I     + + M   G
Sbjct: 296 IINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + VTYN+L+D  CK  N+++A  +   M  +G++ N  T   ++  LC   +L +  
Sbjct: 356 QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQ 415

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +GY +D  +Y  +I+G  ++   + AL +  +M++   +P+  T+  +I  L
Sbjct: 416 ALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL 475

Query: 301 SQSGKTEQAIDMLNELLQSGMIP-------DETTFNTIIHGFCSE 338
            +  + ++A  +L+E++  G++P         +  N +I  F SE
Sbjct: 476 LEKDENDKAEKLLHEMIAKGLLPFRNFHSERSSVTNKVIVNFHSE 520



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 148/296 (50%), Gaps = 20/296 (6%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           + +G ++    + +     + L  +M+ + I+P   T + +I      G+   +  +L +
Sbjct: 11  IEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGK 70

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +L+ G  P+    NT++ G C +G+V+K+L FH+K+V + F+ D V+  ILL+GLC+ G 
Sbjct: 71  ILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGE 130

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
              A+K  R+   +    D V Y+T+I  LCK++ +++A+ L SEM  + + PD  TY  
Sbjct: 131 TRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTT 190

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------------SK------TPE 476
           +      +G+L EA    + M+    IN  +   NT             SK      T +
Sbjct: 191 LICGFCLAGQLMEAFGLLNEMI-LKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            + P  + YS  ++ +C  G  + A QIF    Q G+  +  +Y  ++NGL K ++
Sbjct: 250 GVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 239/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   + VT N +++     G++     +L  + K G  P+  T N L+ G C  G 
Sbjct: 36  MEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+++   D +       D  +Y  L+NG C  G    A +L + +E     P+VV YNT
Sbjct: 96  VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     EA+ L  E+D  GI P+A+T+  +I  +C  G++  A  ++  M    
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P    YN LI+A CK GN++EA  ++ VM ++G+K   +T +T++   C   ++  A 
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAK 275

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++  + G   +  SY  +I G  + ++ + A+ L  EM  + ++P T TYN++I GL
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+   A++++NE+   G   D  T+ +++   C    ++KA     KM E+  +P +
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 395

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   L+ GLC+ G L+ A + F+  ++KG  +D  TY  +IS LCKE   ++A  + S+
Sbjct: 396 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ME+    P+  T+  I  +L E    ++A+K    M+  G
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 229/459 (49%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  + +N IL +L K  +      L   M+ +G+  N  T NIL++ +C LG +  +  V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T N L+ G C  G ++++     ++ +     D V+Y TL+N   +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A KL+  +++   +PN V +N +I   CK+  +++A  +   M+  G  PD +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLI   C  G +  AF ++D M  K +       N +++ LC E  + EA  LL   +
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G     V+Y TL+ GY    +   A +++  M +  + P+ ++YN MI GL +  + +
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++L E+L   M+PD  T+N++I G C  G++  AL   N+M  +    D+VT   LL
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+   L+KA   F     +G      TY  LI  LCK  RL++A  L   +  K   
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
            D +TY  + + L + G  +EA    S M + G I + V
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAV 466



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 233/452 (51%), Gaps = 17/452 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P +  +N ++           A  L K+ME   +  + VT N LIN F   G+   +F +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           + ++ + G +P+ +T N ++K  C +G++ K+      +   GF  D V+Y TL++  CK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G    A +++ ++  +  + N +  NTI+  LC +K ++EAY L +    RG + D ++
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI G+    +   A  L DEM  + I P  + YN +I  L + G  ++A ++L  + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G+ P   T++T++ G+C  G+V+ A Q  + MV+    P++ + NI+++GLC+   ++
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A+   R  + K    D+VTYN+LI  LCK  R+  A  L++EM  +    D  TY ++ 
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
            AL ++  L++A      M E G                 I P+  +Y+  I+  C  GR
Sbjct: 368 DALCKNQNLDKATALFMKMKERG-----------------IQPTMYTYTALIDGLCKGGR 410

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            K+A ++F+    KG  I+  TY  +++GL K
Sbjct: 411 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 442



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 222/423 (52%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD +T NT++  L  KG++ +       +  QG   +  +Y  L++G CK+G  + 
Sbjct: 74  LGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRC 133

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++ ++    + P+V  YN +I+G C   ++ EA+ L  EM++  + PD +TY TLI 
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   G+ M AF L+DE+    I P    +NI+I   CKEG + +A  ++  M + G  P
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VTY+TL+D  C  G ++ A ++   M + G+  N  + N +++ LC  K++DEA  LL
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 313

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +    D V+Y +LI G  +  +   AL L +EM  R       TY +++  L ++
Sbjct: 314 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              ++A  +  ++ + G+ P   T+  +I G C  G+++ A +    ++ K    D+ T 
Sbjct: 374 QNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTY 433

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +++SGLC+EG+ ++AL         G   ++VT+  +I SL ++   + A  LL EM  
Sbjct: 434 TVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIA 493

Query: 424 KKL 426
           K L
Sbjct: 494 KGL 496



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 198/385 (51%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D+V+Y T+L+ L K G+      LL  ++ +   PN   YN ++ G CK   + EA  + 
Sbjct: 114 DHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY 173

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      PD  TY  LI G+C  G L  AF L  EM    + P V  YN LIN   + 
Sbjct: 174 SEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKE 233

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   EA  L+  + + GIKP  VT++ ++  YC  G++  A +I   M + G +P+  +Y
Sbjct: 234 GNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSY 293

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N +I+  CK   ++EA  ++  M  K +  +T+T N+++  LC   ++  A  L+N    
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 353

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   D V+Y +L+    +++  ++A  L+ +MKER I P+ +TY A+I GL + G+ + 
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKN 413

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A ++   LL  G   D  T+  +I G C EG  ++AL   +KM +    P+ VT  I++ 
Sbjct: 414 AQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 473

Query: 369 GLCREGILEKALKFFRSWILKGKAV 393
            L  +   +KA K     I KG  V
Sbjct: 474 SLFEKDENDKAEKLLHEMIAKGLLV 498



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 17/384 (4%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P  +  N ++    K  +   A  + + ME  G   + VT N LI+  C  G M  +F +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +  + + G + +TITLNT++  LC + ++ ++    +    +G+ +D VSYGTL+ G  +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             +   A+KL   +++R   P+   YN +I GL +     +A D+ +E+   G+ PD  T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           + T+I+GFC  GQ+  A    ++M+ K+  P +   NIL++ LC+EG +++A        
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G     VTY+TL+   C    +++A  +   M +  + P+ Y+Y  +   L +  R++
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA      M+    +                 P +++Y+  I+  C  GR   AL +  E
Sbjct: 308 EAMNLLREMLHKNMV-----------------PDTVTYNSLIDGLCKSGRITSALNLMNE 350

Query: 508 TRQKGIAINKSTYMNLMNGLIKRR 531
              +G   +  TY +L++ L K +
Sbjct: 351 MHHRGQPADVVTYTSLLDALCKNQ 374



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 170/315 (53%), Gaps = 4/315 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +++AL K+G + E ++LL+ M K+G+ P   TY+ L+ GYC +G ++ A ++
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI 277

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M Q    P+V++YN++ING C    ++EA  L +EM    ++PD VTYN+LI+   +
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 337

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR   A  L++E+   G   + VT+  ++   CK   +DKA  +   M+E G  P   T
Sbjct: 338 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 397

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  CK G ++ A  +   +  KG  ++  T   ++  LC E   DEA  + +   
Sbjct: 398 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 457

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   + V++  +I   F  ++ ++A KL  EM  + ++   F   A ++  +++ K E
Sbjct: 458 DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKV-ADVFVQNENDKAE 516

Query: 308 QAIDMLNELLQSGMI 322
           +   +L+E++  G++
Sbjct: 517 K---LLHEMIAKGLL 528



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 170/350 (48%), Gaps = 35/350 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V YNTI+D L K   +NE  DL S+M  +G+ P+  TY  L+ G+C LG L  A  +
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSL 207

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      P V+ YN+LIN  C  G ++EA  L   M    + P VVTY+TL++ +  
Sbjct: 208 LDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCL 267

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A ++   + + G+ PN  ++NIMI   CK  ++D+A  ++R M      PD VT
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 327

Query: 188 YNTLI-----------------------------------DANCKAGNMEEAFRMMDVMG 212
           YN+LI                                   DA CK  N+++A  +   M 
Sbjct: 328 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G++    T   ++  LC   +L  A  L      +G  +D  +Y  +I+G  ++   +
Sbjct: 388 ERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFD 447

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            AL +  +M++   +P+  T+  +I  L +  + ++A  +L+E++  G++
Sbjct: 448 EALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 159/351 (45%), Gaps = 52/351 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P  + +N ++ +  K      A  +   M  KG++ N +TLN +++  C   ++  ++ 
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L    K GY                                    P T T N ++ GL 
Sbjct: 67  VLGKILKLGY-----------------------------------QPDTITLNTLMKGLC 91

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G+ ++++   ++++  G   D  ++ T+++G C  G+   A++    + ++S +P++V
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVV 151

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++ GLC++ ++ +A   +     +G   D++TY TLI   C   +L  AF LL EM
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEM 211

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             K + P  Y Y  +  AL + G ++EA+   ++M                 T E I P 
Sbjct: 212 ILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM-----------------TKEGIKPG 254

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            ++YS  ++ +C  G  ++A QIF    Q G+  N  +Y  ++NGL K ++
Sbjct: 255 VVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305


>gi|255593595|ref|XP_002535907.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223521568|gb|EEF26477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 155

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/155 (70%), Positives = 133/155 (85%)

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           +KLWDEMKE++I+PS  TY+ MI GL +SGKT+Q+ID LNELL+SG++P + T+NTIIHG
Sbjct: 1   MKLWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 60

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           +C EGQVEKA QF NKMVEKSFKPD+ TCNILL GLC EG+L+ ALK F +WI KGKA+D
Sbjct: 61  YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 120

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           +VTYNT+IS LCKE R E+AF LL+EMEEKKLGPD
Sbjct: 121 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 155



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 86/153 (56%)

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           KL DE+ E  I P+  T++ MI   C+ GK D++   +  + E+G  P  +TYNT+I   
Sbjct: 2   KLWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGY 61

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C+ G +E+AF+  + M  K  K +  T N +L  LC E  LD A  L N+   +G  +D 
Sbjct: 62  CREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 121

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           V+Y T+I+G  ++ +   A  L  EM+E+++ P
Sbjct: 122 VTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGP 154



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 87/143 (60%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P   TY+T++  L + GK ++  D L+++ + GLVP++ TYN ++ GYC+ G +++A +
Sbjct: 13  IPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQ 72

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
             + M +    PD++T N+L+ G C  GML+ A +L     S     D VTYNT+I+   
Sbjct: 73  FRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLC 132

Query: 127 ESGRSMEAFKLIDELDEHGIKPN 149
           + GR  EAF L+ E++E  + P+
Sbjct: 133 KEGRFEEAFDLLAEMEEKKLGPD 155



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 85/143 (59%)

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
           +L  EM+  +++P + TY+T+I     SG++ ++   ++EL E G+ P+ +T+N +I  Y
Sbjct: 2   KLWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGY 61

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           C+EG+++KA +    M E  F PD  T N L+   C  G ++ A ++ +    KG  ++ 
Sbjct: 62  CREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 121

Query: 221 ITLNTILHTLCCEKKLDEAYMLL 243
           +T NTI+  LC E + +EA+ LL
Sbjct: 122 VTYNTIISGLCKEGRFEEAFDLL 144



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 85/152 (55%)

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M++ D M + + +P + TY+ +I G C +G  +++     E+    L+P  +TYNT+I+ 
Sbjct: 1   MKLWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 60

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G+  +AF+  +++ E   KP+  T NI+++  C EG +D A K+       G + D
Sbjct: 61  YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 120

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
            VTYNT+I   CK G  EEAF ++  M  K L
Sbjct: 121 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKL 152



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 84/153 (54%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L  +MK++ ++P+  TY+ ++ G C+ G   +++  ++ + ++  +P   TYN +I+G+C
Sbjct: 3   LWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYC 62

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +E+AF+ R +M      PD+ T N L+      G    A KL +     G   +AV
Sbjct: 63  REGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 122

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           T+N +I   CKEG+ ++A  ++  MEE    PD
Sbjct: 123 TYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 155



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 79/154 (51%)

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++ D M  K +  +  T +T++  LC   K D++   LN   + G    +++Y T+I GY
Sbjct: 2   KLWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGY 61

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R+ +  +A +  ++M E+   P  FT N ++ GL   G  + A+ + N  +  G   D 
Sbjct: 62  CREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 121

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            T+NTII G C EG+ E+A     +M EK   PD
Sbjct: 122 VTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 155



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 80/154 (51%)

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           K+   M+E    P   TY+T+I   C++G  +++   ++ +   GL  + IT NTI+H  
Sbjct: 2   KLWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGY 61

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C E ++++A+   N   ++ +  D  +   L+ G   +   + ALKL++    +      
Sbjct: 62  CREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 121

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            TYN +I GL + G+ E+A D+L E+ +  + PD
Sbjct: 122 VTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 155



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 58/110 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  +TYNTI+    ++G++ +     + M ++   P+  T NIL+ G C  G L  A
Sbjct: 46  GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 105

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
           +++ +         D  TYN +I+G C  G  EEAF L  EME  KL PD
Sbjct: 106 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 155



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 17/170 (10%)

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           ++  ++M EK   P I T + ++ GLCR G  ++++      +  G     +TYNT+I  
Sbjct: 1   MKLWDEMKEKEIIPSINTYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 60

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            C+E ++E AF   ++M EK   PD +T   +   L   G L+ A K  +  +  GK   
Sbjct: 61  YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGK--- 117

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                        ID  +++Y+  I+  C +GR+++A  +  E  +K + 
Sbjct: 118 ------------AID--AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLG 153



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 17/133 (12%)

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TY+T+I  LC+  + + +   L+E+ E  L P + TY  I       G++E+A +F + M
Sbjct: 18  TYSTMIGGLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKM 77

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           VE                 +   P   + +  +   C++G   +AL++F     KG AI+
Sbjct: 78  VE-----------------KSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 120

Query: 517 KSTYMNLMNGLIK 529
             TY  +++GL K
Sbjct: 121 AVTYNTIISGLCK 133


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 250/494 (50%), Gaps = 17/494 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F C PD   YN +++A   +G+  +    +  M   G  P+  T+  +++ +C  G 
Sbjct: 175 MQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGN 234

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  + D M +   +P+V  YN L+NG+  A  + +A  L +EM+S  + PD  T+N 
Sbjct: 235 MMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNI 294

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+   +  GR  +  +L+ +L + G    +  +NI +   C  G +D+A K + +M E G
Sbjct: 295 LVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKG 354

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  V +N++I A  +AG  E+A++   +M + GL  +++T ++++  L    +L EA 
Sbjct: 355 ITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEAR 414

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G  +++ ++  L+ GYFR      A  LW+EM+ R I P    ++A I GL
Sbjct: 415 DLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGL 474

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S  G  ++A D+  ++ + G +P+   +N++I GFC+ G++++AL    +M  K   PDI
Sbjct: 475 SIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDI 534

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI+++GLC+EG ++ A   FR+    G   D VTYNTLI   CK         ++++
Sbjct: 535 FTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNK 594

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  TY      L    ++  A      ++  G +                 P
Sbjct: 595 MYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVV-----------------P 637

Query: 481 SSISYSEKINEHCS 494
            +++Y+  +N  C+
Sbjct: 638 DTVTYNTVMNGVCT 651



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 225/479 (46%), Gaps = 36/479 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VT+ T+++A   +G + E R+L   MK+ G +PN   YN L++GY K   + +A
Sbjct: 214 GCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQA 273

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M      PD  T+N+L+ G    G  E+  RL +++     L     YN  ++ 
Sbjct: 274 NMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSG 333

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G   EA K ++++ E GI P  V  N +I  Y + G  +KA K  R M + G  P 
Sbjct: 334 LCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPS 393

Query: 185 CVTYNTLIDANCKAGNMEEA--------------------------FRMMDVMGR----- 213
            +T ++LI    K   ++EA                          FRM DV G      
Sbjct: 394 SLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWN 453

Query: 214 ----KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
               +G+  + +  +  ++ L     +DEAY +    SK+G+  +   Y +LI G+    
Sbjct: 454 EMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSG 513

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   AL L  EM  + ++P  FT N +I GL + G+ + A D+   +  +G+IPD  T+N
Sbjct: 514 RLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYN 573

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I G+C         +  NKM    + PDI T NI L GLC    + +A+      I  
Sbjct: 574 TLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISA 633

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           G   D+VTYNT+++ +C +  LE A  + +++ +    P+  T   + +   + G  E+
Sbjct: 634 GVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEK 691



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 204/408 (50%), Gaps = 36/408 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N ++   ++ G+  +   LL D+ + G +   + YNI VSG C  GWL EAM+ 
Sbjct: 287 PDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKF 346

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI----- 122
           ++ M +    P V  +N +I  +  AG+ E+A++  + M    L P  +T ++LI     
Sbjct: 347 LEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSK 406

Query: 123 ------------------------------NRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                                         + +F  G    A+ L +E++  GI P+AV 
Sbjct: 407 LWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVA 466

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            +  I      G +D+A  +   M + GF P+   YN+LI   C +G ++EA  +   M 
Sbjct: 467 FSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMA 526

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           RKGL  +  T N I++ LC E ++  A  +  +    G   D V+Y TLI GY +     
Sbjct: 527 RKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTV 586

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
              ++ ++M      P   TYN  + GL    K  +A+ ML EL+ +G++PD  T+NT++
Sbjct: 587 STDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVM 646

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +G C++  +E+A+    K+++ +F P++VT N+LLS  C++G+ EK +
Sbjct: 647 NGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTI 693



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D    +T++    K     E  +++  M++ GL P+ +   IL     ++G      +++
Sbjct: 78  DFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLL 137

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      P    +N +I G+C  G ++    L   M+  K  PDV  YN LIN +   
Sbjct: 138 RGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTR 197

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G++ +A   +  + ++G  P+ VT   +I  +C +G + +A  +   M+E G  P+ V Y
Sbjct: 198 GQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCY 257

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI---------------------- 226
           NTL++   KA ++ +A  + + M  K +  +  T N +                      
Sbjct: 258 NTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQ 317

Query: 227 -------------LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
                        +  LC    LDEA   L    ++G     V++ ++I  Y R     +
Sbjct: 318 SGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEK 377

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A K +  M +  + PS+ T +++I GLS+  + ++A D+L E++  G+  ++  F  ++ 
Sbjct: 378 AYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLD 437

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G+   G V  A    N+M  +   PD V  +  ++GL   G++++A   F     KG   
Sbjct: 438 GYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMP 497

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           ++  YN+LI   C   RL++A  L  EM  K L PD +T   I   L + GR++ A    
Sbjct: 498 NNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVF 557

Query: 454 SIMVETGKINHQVVQP----------NTSKTPEEI--------DPSSISYSEKINEHCSQ 495
             M  TG I   V             +T  T E +        DP   +Y+ +++  C+ 
Sbjct: 558 RNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTG 617

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +   A+ + EE    G+  +  TY  +MNG+
Sbjct: 618 RKMSRAVMMLEELISAGVVPDTVTYNTVMNGV 649



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 213/494 (43%), Gaps = 54/494 (10%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D    + L+ G+    M  EA  +   M  + L P       L       G     +KL+
Sbjct: 78  DFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLL 137

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
             +   G +P     N +I  +C++G +     ++  M++    PD   YN LI+A C  
Sbjct: 138 RGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTR 197

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G   +A   M  M   G   + +T  T+++  C +  + EA  L +   + G+  + V Y
Sbjct: 198 GQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCY 257

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TL+ GY +     +A  L++EMK + + P   T+N ++ G  + G+ E    +L +L Q
Sbjct: 258 NTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQ 317

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           SG +   + +N  + G C  G +++A++F   M+EK   P +V  N +++   R G+ EK
Sbjct: 318 SGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEK 377

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED------------------------- 413
           A K +R  +  G    S+T ++LI  L K  RL++                         
Sbjct: 378 AYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLD 437

Query: 414 ----------AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
                     A+ L +EME + + PD   ++A    L   G ++EA      M + G + 
Sbjct: 438 GYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFM- 496

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                           P++  Y+  I   C+ GR ++AL +  E  +KG+  +  T   +
Sbjct: 497 ----------------PNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNII 540

Query: 524 MNGLIK--RRKSIS 535
           +NGL K  R KS S
Sbjct: 541 INGLCKEGRMKSAS 554


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 253/494 (51%), Gaps = 17/494 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C PD  +YN +++A   KG+ +    LL+ M + G  P+  T+  ++  +CK G 
Sbjct: 314 MGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGN 373

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A +  D +       +   YN++I+G+  A  + +A  L +EM +  ++PD +T+NT
Sbjct: 374 VELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 433

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+   +  G+  +  +L+ +L   G+  ++   ++ +   C  G+ D+A K++ N+   G
Sbjct: 434 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKG 493

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V +N++I A   AG  E AF    +M + GL  ++ T +++L +L  +  LDEA+
Sbjct: 494 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAW 553

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           + L     +G+ +  +++  L+ GYFR    N A  LW+EMK R + P    + A I GL
Sbjct: 554 IALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGL 613

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG    A D+ +++L+ G +P+   +N++I GFC  G++ +AL+   +M ++   PDI
Sbjct: 614 CISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDI 673

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N+++ GLC++G ++ A++ F      G + D VTYNTLI   CK   +  A  L+ +
Sbjct: 674 FTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMK 733

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +    PD  TY           ++  A      ++  G                 I P
Sbjct: 734 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG-----------------IVP 776

Query: 481 SSISYSEKINEHCS 494
           ++++Y+  IN  C+
Sbjct: 777 NTVTYNTMINAVCN 790



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 248/573 (43%), Gaps = 55/573 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D    +T++ A  K     E  ++LS M++ G+ PN +  +IL     + G      ++ 
Sbjct: 217 DYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 276

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             + +    P+ +T+N+LI  +C  G       L   M   +  PDV +YN +IN     
Sbjct: 277 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLK 336

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+S  A  L++ + E+G KP+  T   +I  +CKEG ++ A K    +E+ G S + + Y
Sbjct: 337 GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVY 396

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT----------------------- 225
           N +I    KA ++ +A  + + M  K +  + IT NT                       
Sbjct: 397 NIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSV 456

Query: 226 --ILHT----------LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
             +LH           LC   + DEA  LL +   +G     V++ ++I  Y       R
Sbjct: 457 SGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEER 516

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A   +  M +  + PS+ T ++++  L + G  ++A   L +++  G       F  ++ 
Sbjct: 517 AFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLD 576

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G+   G V  A    N+M  +   PD V     ++GLC  G++  A   F   + KG   
Sbjct: 577 GYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVP 636

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           ++  YN+LI   CK  +L +A  L+ EM ++ L PD +T   I   L + GR++ A +  
Sbjct: 637 NNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETF 696

Query: 454 SIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKINEHCS 494
             M   G ++  +V  NT                     +    +P   +Y+ +I+ +C+
Sbjct: 697 MDMCRMG-LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCT 755

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             +   A+ I EE    GI  N  TY  ++N +
Sbjct: 756 VRKINRAVMILEELISVGIVPNTVTYNTMINAV 788



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 192/409 (46%), Gaps = 36/409 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD +T+NT++   ++ GK  +   LL D+   GL+ + +  ++ V+G C  G   EAM+
Sbjct: 425 VPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMK 484

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT--------- 117
           +++ +      P V  +N +I  + NAG+ E AF     M    L P   T         
Sbjct: 485 LLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLV 544

Query: 118 --------------------------YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                     +  L++ +F  G    A  L +E+   G+ P+AV
Sbjct: 545 RKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAV 604

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                I   C  G +  A  +  +M   GF P+   YN+LI   CK G + EA +++  M
Sbjct: 605 AFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREM 664

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            ++GL  +  T+N I+  LC + ++  A        + G   D V+Y TLI GY +    
Sbjct: 665 NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDV 724

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A  L  +M +    P   TYN  I G     K  +A+ +L EL+  G++P+  T+NT+
Sbjct: 725 GGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTM 784

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           I+  C+   ++ A+    K+++ +F P+ VT N+LLS  C++G+ EKA+
Sbjct: 785 INAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 832



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 215/470 (45%), Gaps = 17/470 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA+ ++  M +    P+    ++L      AG     ++L  ++      P+  T+N LI
Sbjct: 236 EALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLI 295

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             F   G +     L+  + +   +P+  ++NI+I   C +G+   A  ++  M ENG  
Sbjct: 296 LEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCK 355

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P   T+ T+IDA CK GN+E A +  D +   GL  NTI  N ++      + + +A +L
Sbjct: 356 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 415

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                 +    D +++ TL+ G++R  K     +L  ++    ++  +   +  + GL  
Sbjct: 416 FEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCW 475

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G+ ++A+ +L  LL  G+ P    FN+II  + + G  E+A   +  MV+    P   T
Sbjct: 476 AGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSST 535

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           C+ LL  L R+G L++A       I KG  V ++ +  L+    +   +  A  L +EM+
Sbjct: 536 CSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMK 595

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + + PD   +AA    L  SG + +A    S M+  G +                 P++
Sbjct: 596 GRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFV-----------------PNN 638

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             Y+  I   C  G+  +AL++  E  ++G+  +  T   ++ GL K+ +
Sbjct: 639 FVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 688



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 169/327 (51%), Gaps = 1/327 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  P + T +++L +L +KG L+E    L DM  +G       + +L+ GY ++G 
Sbjct: 524 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 583

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  + + M      PD   +   ING C +G++ +A+ +  +M     +P+   YN+
Sbjct: 584 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 643

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + G+  EA KL+ E+++ G+ P+  T N++I   CK+G++  A +   +M   G
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VTYNTLID  CKA ++  A  +M  M   G + +  T N  +H  C  +K++ A 
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 763

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           M+L      G   + V+Y T+I     +   + A+ L  ++ +   +P+T T N ++   
Sbjct: 764 MILEELISVGIVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQF 822

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETT 327
            + G  E+AI    +L +  +  DETT
Sbjct: 823 CKQGMPEKAIFWGQKLSEIHLDFDETT 849



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 3/352 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  P  V +N+I+ A    G           M K GL P+ +T + L+    + G L 
Sbjct: 491 GKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLD 550

Query: 63  EA-MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           EA + + D++ +   + ++  + +L++G+   G +  A  L  EM+   + PD V +   
Sbjct: 551 EAWIALYDMIDKGFPVTNM-AFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAF 609

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN    SG   +A+ +  ++   G  PN   +N +I  +CK GK+++A K+VR M + G 
Sbjct: 610 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 669

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD  T N +I   CK G M+ A      M R GL  + +T NT++   C    +  A  
Sbjct: 670 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADD 729

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L+   S  G+  D  +Y   I GY    K NRA+ + +E+    I+P+T TYN MI  + 
Sbjct: 730 LMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC 789

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
                + A+ +  +LL+   +P+  T N ++  FC +G  EKA+ +  K+ E
Sbjct: 790 NV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSE 840



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 18/357 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D    +TL+ A  K+    EA  ++  M   G+  N   ++ +   L         +
Sbjct: 214 YESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVW 273

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++G   +  ++  LI  + R         L   M + +  P  ++YN +I   
Sbjct: 274 KLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINAN 333

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G++  A+ +LN ++++G  P   TF TII  FC EG VE A ++ +++ +     + 
Sbjct: 334 CLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNT 393

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  NI++SG  +   + +A   F     K    D +T+NTL++   +  + ED   LL +
Sbjct: 394 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 453

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +    L  D          L  +GR +EA K    ++  G                 I P
Sbjct: 454 LSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKG-----------------IPP 496

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           S ++++  I  + + G  + A   +    + G+  + ST  +L+  L+ R+ S+ +A
Sbjct: 497 SVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLV-RKGSLDEA 552



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYN  +       K+N    +L ++   G+VPN  TYN +++  C +  
Sbjct: 734 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-I 792

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  AM +   + +   +P+  T N+L++ +C  GM E+A    +++  + L  D  T+  
Sbjct: 793 LDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHK- 851

Query: 121 LINRFFES 128
           L+NR + +
Sbjct: 852 LMNRAYRA 859


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 223/422 (52%), Gaps = 1/422 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V++  ++ A    G++ E    L+ M ++G + +  T  +++  +C+ G++   
Sbjct: 219 GVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRV 278

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M +    P+V  +  LING C  G +++AF L +EM      P+V T+ TLI+ 
Sbjct: 279 VGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDG 338

Query: 125 FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G + +AF+L  +L    G KPN  T+  MI  YCKE K+++A  ++  M+E G  P
Sbjct: 339 LCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLID +CK GN   A+ +MD+MG++G   N  T N I+  LC +  LDEAY LL
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N  S  G   D V+Y  L++ + R    NR+L  +++M +    P   +Y  +I    + 
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQ 518

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + +++  +  E +  G+IP + T+ ++I G+C  G    A++   +M      PD +T 
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+SGLC+E  L+ A   + + + KG +   VT  TL    CK+     A  +L  +E+
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638

Query: 424 KK 425
           ++
Sbjct: 639 RQ 640



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 247/518 (47%), Gaps = 16/518 (3%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GKL E  +++ +M+ QGLV +  T N ++     +G ++ A  +   M Q    PD  ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +++   CN G + EA +    M     + D  T   +I+ F + G          ++ E
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ PN +    +I   CK+G I +A +++  M   G+ P+  T+ TLID  CK G  E+
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 204 AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+ + ++   G K N  T   +++  C E KL+ A MLL+   ++G   +  +Y TLI
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +     RA +L D M +    P+ +TYNA+I GL + G  ++A  +LN++   G+ 
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D  T+  ++   C +    ++L F NKM++  F PDI +   L+S  CR+  ++++ + 
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERL 527

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   +  G      TY ++I   C+      A  L   M      PD  TY A+ + L +
Sbjct: 528 FEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK 587

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS-----EK--------- 488
             +L++A+     M++ G    +V +   +    + D SS + +     EK         
Sbjct: 588 ESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNT 647

Query: 489 -INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            + + CS+G+   A   F +   K   +N+ T +  MN
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 219/425 (51%), Gaps = 8/425 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ + +  +++ L K+G + +  +LL +M ++G  PN  T+  L+ G CK GW
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 61  LKEAMRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            ++A R+ + L+  +   P+V TY  +ING+C    L  A  L   M+   L+P+  TY 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   + G  + A++L+D + + G  PN  T+N +I   CK+G +D+A +++  +  +
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G   D VTY  L+  +C+  +   +    + M + G   +  +  T++   C +K++ E+
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKES 524

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L   A   G    + +Y ++I GY R    + A+KL+  M      P + TY A+I G
Sbjct: 525 ERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  K + A ++ + ++  G+ P E T  T+ + +C +     A+   +++ ++ +   
Sbjct: 585 LCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW--- 641

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I T N L+  LC EG L+ A  FF   + K   V+ VT    ++  C E    + +GL+S
Sbjct: 642 IRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNK-CYE---SNKYGLVS 697

Query: 420 EMEEK 424
           E+ E+
Sbjct: 698 ELSER 702



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 233/474 (49%), Gaps = 18/474 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           +V  + + G LKEA+ +V  M     +    T N +++     G++E A  +  EM    
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + PD V++  ++      GR +EA K ++ + E G   +  T  ++I  +C++G +++  
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
                M E G +P+ + +  LI+  CK G++++AF +++ M R+G K N  T  T++  L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 231 CCEKKLDEAY-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           C +   ++A+ + L      GY  +  +Y  +I GY +++K NRA  L   M+E+ ++P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           T TY  +I G  + G   +A ++++ + + G  P+  T+N II G C +G +++A +  N
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           K+     + D VT  IL+S  CR+    ++L FF   +  G   D  +Y TLIS  C+++
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +++++  L  E     L P + TY ++       G    A K    M   G         
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG--------- 570

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                     P SI+Y   I+  C + +  DA  +++    KG++  + T + L
Sbjct: 571 --------CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 189/393 (48%), Gaps = 19/393 (4%)

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           M+  + + GK+ +A  +V  M+  G      T N ++D     G +E A  M   M ++G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  + ++   ++   C   ++ EA   LN+  +RG+ +D  +   +I  + +    NR +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
             + +M E  + P+   + A+I GL + G  +QA ++L E+++ G  P+  T  T+I G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 336 CSEGQVEKALQFHNKMVEK-SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           C +G  EKA +   K+V    +KP++ T   +++G C+E  L +A         +G   +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           + TY TLI   CK      A+ L+  M ++   P+ YTY AI   L + G L+EA +  +
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 455 IM----VETGKINHQVV------QPNTSKT--------PEEIDPSSISYSEKINEHCSQG 496
            +    ++   + + ++      Q +T+++             P   SY+  I+  C Q 
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + K++ ++FEE    G+   K TY +++ G  +
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 262/510 (51%), Gaps = 20/510 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V+YNT+L AL ++G   +    L  +      P   +Y  L+   C      +A+ ++
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M  +   PDV TY  LI G C+A  +++A  L +EM    + P+VV Y+ L+  + ++
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR     K+ +E+   GI+P+ V +  +I   C+EGK+ KA +++  M E G  P+ VTY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI++ CK G+++EA  + + M  KG+ ++ +T NT++  L    ++DEA  LL     
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 249 RGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
               ++   V++ ++I G  +  +  +A ++ D M E     +  T+N +I GL +  K 
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A+++++E+  SG+ PD  T++ +I+GFC   QV++A    +KM     +P++V    L
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L+ LC +G++E+A  FF   + K   +D V Y+T+I   C+ R  + A   L  M ++ L
Sbjct: 437 LAALCEQGMMEQARNFF-DEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY+ +      SG L  A++    M  +G +                 P    + 
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFV-----------------PDVAVFD 538

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAIN 516
             I  + ++G  +  L++  E   K IA++
Sbjct: 539 SLIKGYGAKGDTEKVLELIREMTAKDIALD 568



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 234/431 (54%), Gaps = 3/431 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V+Y T++ AL  + +  +   LL DM+  G+ P+  TY  L+ G C    + +A+ +
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M ++   P+V  Y+ L+ G+C AG  E   ++ +EM    + PDVV Y  LI+    
Sbjct: 171 LREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A +++D++ E G++PN VT+N++I   CKEG + +A  +  NM E G + D VT
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290

Query: 188 YNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           YNTLI        M+EA  +++ M  G   ++ N +T N+++H LC   ++ +A+ + + 
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDM 350

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++ G   + V++  LI G  R  K  +A++L DEM    + P +FTY+ +I G  +  +
Sbjct: 351 MAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQ 410

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A  +L+++ + G+ P+   +  ++   C +G +E+A  F ++M  K+ K D+V  + 
Sbjct: 411 VDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYST 469

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ G CR    + A +F +  + +G   DSVTY+ LI+       L  A  +L +M    
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529

Query: 426 LGPDRYTYAAI 436
             PD   + ++
Sbjct: 530 FVPDVAVFDSL 540



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 220/443 (49%), Gaps = 3/443 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTY T++  L     +++  +LL +M + G+ PN   Y+ L+ GYCK G 
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +   +V + M+     PDV  Y  LI+  C  G +++A ++  +M    L P+VVTYN 
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--EE 178
           LIN   + G   EA  L + + E G+  +AVT+N +I       ++D+A  ++  M   E
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               P+ VT+N++I   CK G M +AF++ D+M   G   N +T N ++  L    K+ +
Sbjct: 319 TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKK 378

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L++  +  G   D  +Y  LI G+ +  + +RA  L  +M+   I P    Y  ++ 
Sbjct: 379 AMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLA 438

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G  EQA +  +E+ ++  + D   ++T+IHG C     + A +F   M+++   P
Sbjct: 439 ALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIP 497

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT ++L++     G L  A +  +     G   D   +++LI     +   E    L+
Sbjct: 498 DSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELI 557

Query: 419 SEMEEKKLGPDRYTYAAIHTALV 441
            EM  K +  D    + I+T LV
Sbjct: 558 REMTAKDIALDSKIISTIYTCLV 580



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 192/368 (52%), Gaps = 22/368 (5%)

Query: 184 DCVTYNTLIDANCKAGN-MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           D V+YNT++ A C+ G  ++ A  ++ VM  +  +   ++  T++  LC E++  +A  L
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L      G   D V+YGTLI G       ++A++L  EM E  I P+   Y+ ++ G  +
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G+ E    +  E+   G+ PD   +  +I   C EG+V+KA Q  +KM+E+  +P++VT
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM- 421
            N+L++ +C+EG +++A+    + + KG A+D+VTYNTLI+ L     +++A GLL EM 
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 422 -EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV---------VQPNT 471
             E  + P+  T+ ++   L ++GR+ +A +   +M E G   + V         ++ + 
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 472 SKTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
            K   E+         +P S +YS  IN  C   +   A  +  + R+ GI      Y+ 
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 523 LMNGLIKR 530
           L+  L ++
Sbjct: 436 LLAALCEQ 443



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 182/383 (47%), Gaps = 38/383 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD V Y  ++D+L ++GK+ +   ++  M ++GL PN  TYN+L++  CK G 
Sbjct: 209 MSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGS 268

Query: 61  LKEAMRV----------VDLMTQNKSL---------------------------PDVWTY 83
           +KEAM +          +D +T N  +                           P+V T+
Sbjct: 269 VKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTF 328

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N +I+G C  G + +AF++R  M       ++VT+N LI       +  +A +L+DE+  
Sbjct: 329 NSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMAS 388

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G++P++ T++I+I  +CK  ++D+A  ++  M  +G  P+ V Y  L+ A C+ G ME+
Sbjct: 389 SGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQ 448

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A    D M  K  K++ +  +T++H  C  +    A   L      G   D V+Y  LI 
Sbjct: 449 ARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLIN 507

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
            +        A ++  +M     +P    ++++I G    G TE+ ++++ E+    +  
Sbjct: 508 MFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIAL 567

Query: 324 DETTFNTIIHGFCSEGQVEKALQ 346
           D    +TI     +  + +  LQ
Sbjct: 568 DSKIISTIYTCLVANNEGKALLQ 590



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 8/236 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ TY+ +++   K  +++    LLS M++ G+ P    Y  L++  C+ G 
Sbjct: 386 MASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGM 445

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A    D M +N  L DV  Y+ +I+G C     + A    K M    L+PD VTY+ 
Sbjct: 446 MEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSM 504

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F  SG    A +++ ++   G  P+    + +IK Y  +G  +K  +++R M    
Sbjct: 505 LINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKD 564

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG-----RKGLKMNTITLNTILHTLC 231
            + D    +T+    C   N E    +  V G      KG  +++  L  +LH LC
Sbjct: 565 IALDSKIISTIY--TCLVANNEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLC 618



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 19/175 (10%)

Query: 359 DIVTCNILLSGLCREG-ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           D V+ N +L+ LCR+G  L+ AL   R    + +   +V+Y TL+ +LC ERR   A GL
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPT-AVSYTTLMRALCAERRTGQAVGL 135

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L +M+   + PD  TY  +   L ++  +++A +    M E+G                 
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG----------------- 178

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+P+ + YS  +  +C  GR++   ++FEE   +GI  +   Y  L++ L +  K
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK 233


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 241/465 (51%), Gaps = 6/465 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  +YN ++  L++ GK ++   +  +M   G+VPN  TYN ++ G+ K G L+   R+
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M  +   P++ TYN+L++G C AG ++E   L  EM S  + PD  TY+ L +    
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  E  + G+   A T +I++   CK+GK+ KA +++  +   G  P  V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+  ++  AF + + M  + ++ + IT N +++ LC  + + +A  L+    
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G      ++ TLI  Y    +  +   +  +M+++ I     ++ +++    ++GK  
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L++++   + P+   +N+II  +   G  E+A     KM        IVT N+LL
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCR   +++A +   +   +G   D V+YNT+IS+ C +   + A  LL EM +  + 
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           P   TY  + +AL  +GR+ + +     M+      H+ V+P++S
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQML------HKNVEPSSS 472



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 223/450 (49%), Gaps = 17/450 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           PD ++YN++I G   +G   +A ++  EM  + ++P+ +TYNT+I+   + G     F+L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            D++   G KPN VT+N+++   C+ G++D+   ++  M  +   PD  TY+ L D   +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G       +     +KG+ +   T + +L+ LC + K+ +A  +L      G     V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI GY +      A  ++++MK R I P   TYNA+I GL +     +A D++ E+ 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           +SG+ P   TFNT+I  + + GQ+EK     + M +K  K D+++   ++   C+ G + 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A+      I K  A ++  YN++I +  +    E AF L+ +M+   +     TY  + 
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L  S +++EA++    +   G                 + P  +SY+  I+  C++G 
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQG-----------------LRPDVVSYNTIISACCNKGD 416

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              AL++ +E  + GI     TY  L++ L
Sbjct: 417 TDKALELLQEMNKYGIRPTLRTYHTLVSAL 446



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 219/464 (47%), Gaps = 35/464 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P+ +TYNT++D   K G L     L   M   G  PN  TYN+L+SG C+ G 
Sbjct: 42  MVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGR 101

Query: 61  LKEAMRVVDLMTQNKSLPDVWTY-----------------------------------NM 85
           + E   ++D M  +   PD +TY                                   ++
Sbjct: 102 MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 161

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+NG C  G + +A ++ + +    L+P  V YNTLIN + +      AF + +++    
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+P+ +T+N +I   CK   + KA  +V  ME++G  P   T+NTLIDA   AG +E+ F
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 281

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M +KG+K + I+  +++   C   K+ EA  +L+    +    +   Y ++I  Y
Sbjct: 282 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                  +A  L ++MK   +  S  TYN ++ GL +S + ++A +++  L   G+ PD 
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            ++NTII   C++G  +KAL+   +M +   +P + T + L+S L   G +      ++ 
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            + K     S  Y  ++ +  +         L  EM EK +  D
Sbjct: 462 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 53/320 (16%)

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D  SY  +I G +R  K + ALK++DEM +  ++P+  TYN MI G  + G  E    + 
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD-------------- 359
           +++L  G  P+  T+N ++ G C  G++++     ++M   S  PD              
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 360 ---------------------IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
                                  TC+ILL+GLC++G + KA +     +  G    +V Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           NTLI+  C+ R L  AF +  +M+ + + PD  TY A+   L +   + +A+     M +
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
           +G                 +DPS  +++  I+ + + G+ +    +  + +QKGI  +  
Sbjct: 255 SG-----------------VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 297

Query: 519 TYMNLMNGLIKRRKSISKAV 538
           ++ +++    K  K I +AV
Sbjct: 298 SFGSVVKAFCKNGK-IPEAV 316



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 18/252 (7%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P  F+YN +I GL +SGK   A+ + +E++  G++P+  T+NT+I G    G +E   + 
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            ++M+    KP+IVT N+LLSGLCR G +++               D  TY+ L   L +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
                    L +E  +K +    YT + +   L + G++ +A++   ++V TG +     
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV----- 188

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                       P+++ Y+  IN +C     + A  IFE+ + + I  +  TY  L+NGL
Sbjct: 189 ------------PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 236

Query: 528 IKRRKSISKAVD 539
            K  + ++KA D
Sbjct: 237 CK-LEMVTKAED 247


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 223/422 (52%), Gaps = 1/422 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V++  ++ A    G++ E    L+ M ++G + +  T  +++  +C+ G++   
Sbjct: 219 GVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRV 278

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M +    P+V  +  LING C  G +++AF L +EM      P+V T+ TLI+ 
Sbjct: 279 VGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDG 338

Query: 125 FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G + +AF+L  +L    G KPN  T+  MI  YCKE K+++A  ++  M+E G  P
Sbjct: 339 LCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLID +CK GN   A+ +MD+MG++G   N  T N I+  LC +  LDEAY LL
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N  S  G   D V+Y  L++ + R    NR+L  +++M +    P   +Y  +I    + 
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQ 518

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + +++  +  E +  G+IP + T+ ++I G+C  G    A++   +M      PD +T 
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+SGLC+E  L+ A   + + + KG +   VT  TL    CK+     A  +L  +E+
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638

Query: 424 KK 425
           ++
Sbjct: 639 RQ 640



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 248/518 (47%), Gaps = 16/518 (3%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GKL E  +++ +M+ QGLVP+  T N ++     +G ++ A  +   M Q    PD  ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +++   CN G + EA R    M     + D  T   +I+ F + G          ++ E
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ PN +    +I   CK+G I +A +++  M   G+ P+  T+ TLID  CK G  E+
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 204 AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+ + ++   G K N  T   +++  C E KL+ A MLL+   ++G   +  +Y TLI
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +     RA +L D M +    P+ +TYNA+I GL + G  ++A  +LN++   G+ 
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D  T+  ++   C +    ++L F NKM++  F PDI +   L+S  CR+  ++++ + 
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERL 527

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   +  G      TY ++I   C+      A  L   M      PD  TY A+ + L +
Sbjct: 528 FEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK 587

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS-----EK--------- 488
             +L++A+     M++ G    +V +   +    + D SS + +     EK         
Sbjct: 588 ESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNT 647

Query: 489 -INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            + + CS+G+   A   F +   K   +N+ T +  MN
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMN 685



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 220/425 (51%), Gaps = 8/425 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ + +  +++ L K+G + +  +LL +M ++G  PN  T+  L+ G CK GW
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 61  LKEAMRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            ++A R+ + L+  +   P+V TY  +ING+C    L  A  L   M+   L+P+  TY 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   + G  + A++L+D + + G  PN  T+N +I   CK+G +D+A +++  +  +
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G   D VTY  L+  +C+  +   +    + M + G   +  +  T++ T C +K++ E+
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKES 524

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L   A   G    + +Y ++I GY R    + A+KL+  M      P + TY A+I G
Sbjct: 525 ERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  K + A ++ + ++  G+ P E T  T+ + +C +     A+   +++ ++ +   
Sbjct: 585 LCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW--- 641

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I T N L+  LC EG L+ A  FF   + K   V+ VT    ++  C E    + +GL+S
Sbjct: 642 IRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNK-CYE---SNKYGLVS 697

Query: 420 EMEEK 424
           E+ E+
Sbjct: 698 ELSER 702



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 242/490 (49%), Gaps = 19/490 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           +V  + + G LKEA+ +V  M     +P   T N +++     G++E A  +  EM    
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + PD V++  ++      GR +EA + ++ + E G   +  T  ++I  +C++G +++  
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
                M E G +P+ + +  LI+  CK G++++AF +++ M R+G K N  T  T++  L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 231 CCEKKLDEAY-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           C +   ++A+ + L      GY  +  +Y  +I GY +++K NRA  L   M+E+ ++P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           T TY  +I G  + G   +A ++++ + + G  P+  T+N II G C +G +++A +  N
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           K+     + D VT  IL+S  CR+    ++L FF   +  G   D  +Y TLIS+ C+++
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +++++  L  E     L P + TY ++       G    A K    M   G         
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG--------- 570

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     P SI+Y   I+  C + +  DA  +++    KG++  + T + L     K
Sbjct: 571 --------CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCK 622

Query: 530 RRKSISKAVD 539
           +  S S A++
Sbjct: 623 KDDS-STAIN 631


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 251/503 (49%), Gaps = 36/503 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P   + N  L  L K GK +       DM   G+  +  TYNI++   CK G 
Sbjct: 208 MTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGD 267

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  +   M Q    PD+ TYN LI+G+   G+L+E+F L +EM+ +   PDV+TYN 
Sbjct: 268 MVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNA 327

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +  +AF  + E+   G+KPN VT++ +I   CKE  + +A K + +M   G
Sbjct: 328 LINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVG 387

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+  TY +LIDANCKAG + +A ++ D M +  +  N +T  T+L  LC E ++ EA 
Sbjct: 388 LSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAE 447

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +  K G   +  +Y  L+ G+ ++++   AL+L  E+KE++I P    Y  +IWGL
Sbjct: 448 DLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGL 507

Query: 301 S-----------------------------------QSGKTEQAIDMLNELLQSGMIPDE 325
                                               ++GKT +A+++L E+   G+    
Sbjct: 508 CSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTI 567

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP-DIVTCNILLSGLCREGILEKALKFFR 384
            TF  +I G C +G VE+A+ +  +M + + +P ++  C  L+ GLC+   +E A K F 
Sbjct: 568 VTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFD 627

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               K    D + Y  LI    K +  ++A  + S M E  +  D + Y ++   L +  
Sbjct: 628 EMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGN 687

Query: 445 RLEEAQKFTSIMVETGKINHQVV 467
            +++A+ F + M+  G +  +++
Sbjct: 688 LVQQARMFLNEMIGKGIVPDEIL 710



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 214/485 (44%), Gaps = 36/485 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G      TYN ++  + K+G +   + L   MK+ GL P+  TYN L+ GY KLG 
Sbjct: 243 MVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGL 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E+  + + M      PDV TYN LIN +C    + +AF    EM++  L P+VVTY+T
Sbjct: 303 LDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYST 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +     +A K + ++   G+ PN  T+  +I   CK G +  A K+   M +  
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT----------- 229
              + VTY TL+D  CK G M EA  +   M + G+  N  T   ++H            
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482

Query: 230 ------------------------LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
                                   LC + KL+E   +++     G   + V Y   +  Y
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAY 542

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
           F+  K   AL L  EM +  +  +  T+  +I GL + G  E+AID    +    + P+ 
Sbjct: 543 FKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN 602

Query: 326 TTFNT-IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
               T +I G C    +E A +  ++M +K+  PD +    L+ G  +    ++AL    
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G  +D   Y +L+  L +   ++ A   L+EM  K + PD      +     E G
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELG 722

Query: 445 RLEEA 449
            ++EA
Sbjct: 723 SIDEA 727



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 233/490 (47%), Gaps = 16/490 (3%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
           VP    ++ L S + +LG L+EA +    MT+ +  P   + N  +      G  + + +
Sbjct: 179 VPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNK 238

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
             ++M    +   V TYN +I    + G  + A  L  ++ + G+ P+ VT+N +I  Y 
Sbjct: 239 FFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYG 298

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K G +D++  +   M++ G  PD +TYN LI+  CK   M +AF  +  M   GLK N +
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T +T++  LC E  L +A   L    + G   +E +Y +LI    +    + ALKL DEM
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            + Q+  +  TY  ++ GL + G+  +A D+   ++++G+ P+  T+  ++HG     +V
Sbjct: 419 LQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRV 478

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E AL+   ++ EK  KPD++    ++ GLC +  LE+           G   +SV Y   
Sbjct: 479 ENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIR 538

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           + +  K  +  +A  LL EM +  +     T+  +   L + G +EEA  + + M +   
Sbjct: 539 MDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFN- 597

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                +QPN       +          I+  C     + A ++F+E + K +  +K  Y 
Sbjct: 598 -----LQPNNVAVCTAL----------IDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYT 642

Query: 522 NLMNGLIKRR 531
            L++G +K +
Sbjct: 643 ALIDGNLKHK 652



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 187/390 (47%), Gaps = 36/390 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ VTY+T++DAL K+  L +    L DM++ GL PN  TY  L+   CK G+
Sbjct: 348 MKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGY 407

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+++ D M Q +   +V TY  L++G C  G + EA  L + M    + P++ TY  
Sbjct: 408 LSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTA 467

Query: 121 LINRFFESGRSMEAFK-----------------------------------LIDELDEHG 145
           L++   ++ R   A +                                   ++ E+   G
Sbjct: 468 LVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACG 527

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+ N+V + I +  Y K GK  +A  +++ M + G     VT+  LID  CK G +EEA 
Sbjct: 528 IRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAI 587

Query: 206 RMMDVMGRKGLKMNTITLNT-ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
                M    L+ N + + T ++  LC    ++ A  L +    +    D+++Y  LI G
Sbjct: 588 DYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             + +    AL +   M E  +      Y +++WGLSQ    +QA   LNE++  G++PD
Sbjct: 648 NLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           E     ++  +   G +++A++ H+++++K
Sbjct: 708 EILCIRLLRKYYELGSIDEAIELHDELLKK 737



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 17/263 (6%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K + + K + +M    I  S FTYN MI  + + G    A  + +++ Q G+ PD  T+N
Sbjct: 232 KGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYN 291

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++I G+   G ++++     +M +   +PD++T N L++  C+   + KA  F       
Sbjct: 292 SLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS 351

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + VTY+TLI +LCKE  L+ A   L +M    L P+ +TY ++  A  ++G L +A
Sbjct: 352 GLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDA 411

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            K    M++                  ++  + ++Y+  ++  C +GR  +A  +F    
Sbjct: 412 LKLADEMLQV-----------------QVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMI 454

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
           + G+  N  TY  L++G IK ++
Sbjct: 455 KAGVTPNLKTYTALVHGHIKNKR 477


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 237/450 (52%), Gaps = 1/450 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +    ++   F    + +   ++  +++ G  P+   YN L+SG+ K   L+ A
Sbjct: 99  GYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENA 157

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV+D M     LPDV TYN++I  +C+ G L+ A  + +E+      P V+TY  LI  
Sbjct: 158 NRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEA 217

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    A KL+DE+   G++P+ +T+N +I+  CKE  +DKA +++R++   G  PD
Sbjct: 218 TILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPD 277

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN L+      G   E  +++  M   G K N +T + ++ TLC + K++EA  LL 
Sbjct: 278 IITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLR 337

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G   D   Y  LI G+ R+ + + A +  + M     +P    YN ++ GL ++G
Sbjct: 338 SMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTG 397

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +QA+++  +L + G  P+ +++NT+     S G   +AL+   K++ +   PD +T N
Sbjct: 398 KADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYN 457

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+S LCR+G++++A++            + V+YN ++  LCK  R  DA  +L+ M EK
Sbjct: 458 SLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK 517

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
              P+  TY  +   +  SG   EA +  +
Sbjct: 518 GCQPNETTYILLIEGIGFSGLRAEAMELAN 547



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 230/449 (51%), Gaps = 7/449 (1%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           + GK NE    L  M  +G  P+      L+ G+     + +A RV++++ +    PDV+
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEIL-ERYGKPDVF 139

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            YN LI+G+  A  LE A R+   M+S   LPDVVTYN +I  F   G+   A ++ +EL
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            +   +P  +T+ I+I+    +G ID A K++  M   G  PD +TYN +I   CK   +
Sbjct: 200 LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMV 259

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           ++AF ++  +  +G K + IT N +L TL    K  E   L++     G   + V++  L
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSIL 319

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I    RD K   A+ L   MKE+ + P  + Y+ +I G  + G+ + A + L  ++  G 
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD   +NTI+ G C  G+ ++AL+   K+ E    P++ + N L S L   G   +AL+
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                + +G   D +TYN+LIS LC++  +++A  LL +M+  +  P+  +Y  I   L 
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +  R  +A +  + M E G       QPN
Sbjct: 500 KVNRANDAIEVLAAMTEKG------CQPN 522



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 246/477 (51%), Gaps = 18/477 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L++  C+ G   E++  ++ M      PDV     LI G+ N+  + +A R+ + +E   
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
             PDV  YN LI+ F ++ +   A +++D +   G  P+ VT+NIMI  +C  GK+D A 
Sbjct: 135 K-PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           +I   + ++   P  +TY  LI+A    G ++ A +++D M  KGL+ +T+T N I+  +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C E  +D+A+ LL S S RG   D ++Y  L+       K +   KL  EM      P+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            T++ +I  L + GK E+A+++L  + + G+ PD   ++ +I GFC EG+++ A +F   
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M+     PDIV  N +++GLCR G  ++AL+ F      G   +  +YNTL S+L     
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
              A  ++ ++  + + PD  TY ++ + L   G ++EA +    M ++G+         
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM-QSGRYR------- 485

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                    P+ +SY+  +   C   R  DA+++     +KG   N++TY+ L+ G+
Sbjct: 486 ---------PNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 206/405 (50%), Gaps = 35/405 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LPD VTYN ++ +   +GKL+   ++  ++ K    P   TY IL+      G 
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  AM+++D M      PD  TYN +I G C   M+++AF L + + S    PD++TYN 
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      G+  E  KLI E+   G KPN VTH+I+I   C++GK+++A  ++R+M+E G
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   Y+ LI   C+ G ++ A   ++ M   G   + +  NTI+  LC         
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLC--------- 394

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                                     R  KA++AL++++++ E    P+  +YN +   L
Sbjct: 395 --------------------------RTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             SG   +A++M+ +LL  G+ PDE T+N++I   C +G V++A++    M    ++P++
Sbjct: 429 WSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNV 488

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           V+ NI+L GLC+      A++   +   KG   +  TY  LI  +
Sbjct: 489 VSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 213/448 (47%), Gaps = 18/448 (4%)

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+N  C AG   E+    + M      PDV+    LI  FF S    +A ++++ L+ +G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
            KP+   +N +I  + K  +++ A +++  M+  GF PD VTYN +I + C  G ++ A 
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + + + +   +   IT   ++     +  +D A  LL+    +G   D ++Y  +I G 
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            ++   ++A +L   +  R   P   TYN ++  L   GK  +   +++E++  G  P+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T + +I   C +G+VE+A+     M EK  KPD    + L++G CREG L+ A +F   
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            I  G   D V YNT+++ LC+  + + A  +  +++E    P+  +Y  + +AL  SG 
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
              A +    ++  G                 IDP  I+Y+  I+  C  G   +A+++ 
Sbjct: 434 RYRALEMILKLLNQG-----------------IDPDEITYNSLISCLCRDGMVDEAIELL 476

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKS 533
            + +      N  +Y  ++ GL K  ++
Sbjct: 477 VDMQSGRYRPNVVSYNIILLGLCKVNRA 504


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 240/465 (51%), Gaps = 6/465 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  +YN ++  L++ GK ++   +  +M   G+ PNR TYN ++ G+ K G L+   R+
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M  +   P+V TYN+L++G C  G ++E   L  EM S  +LPD  TY+ L +    
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  E  + G+   A T +I++   CK+GK+ KA ++   +   G  P  V 
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+  ++  AF + + M  + ++ + IT N +++ LC  + + +A  L+    
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G      ++ TLI  Y    +  +   +  +M+++ I     ++ +++    ++GK  
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L++++   + P+   +N+II  +   G  E+AL    KM        IVT N+LL
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCR   +++A +   +   +G   D V+YNT+IS+ C +   + A  LL EM +  + 
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           P   T   + +AL  +GR+ + +     M+      H+ V+P++S
Sbjct: 612 PTLRTCHTLVSALASAGRVHDMECLYQQML------HKNVEPSSS 650



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 251/523 (47%), Gaps = 19/523 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP   + N +L++L   G+  +VR     +   G  P+   +N +V      G L  A+ 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 67  VVDLM--TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++  M  ++    PD ++YN++I G   +G   +A ++  EM  + + P+ +TYNT+I+ 
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G     F+L D++   G KPN VT+N+++   C+ G++D+   ++  M  +   PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+ L D   + G  +    +     +KG+ +   T + +L+ LC + K+ +A  +  
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G     V Y TLI GY +      A  ++++MK R I P   TYNA+I GL +  
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A D++ E+ +SG+ P   TFNT+I  + + GQ+EK     + M +K  K D+++  
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++   C+ G + +A+      I K  A ++  YN++I +  +    E A  L+ +M+  
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNS 538

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +     TY  +   L  S +++EA++    +   G                 + P  +S
Sbjct: 539 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG-----------------LRPDVVS 581

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I+  C++G    AL++ +E  + GI     T   L++ L
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSAL 624



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 221/464 (47%), Gaps = 35/464 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYNT++D   K G L     L   M   G  PN  TYN+L+SG C+ G 
Sbjct: 220 MVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGR 279

Query: 61  LKEAMRVVDLMTQNKSLPDVWTY-----------------------------------NM 85
           + E   ++D M  +  LPD +TY                                   ++
Sbjct: 280 MDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSI 339

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+NG C  G + +A ++ + +    L+P  V YNTLIN + +      AF + +++    
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+P+ +T+N +I   CK   + KA  +V  ME++G  P   T+NTLIDA   AG +E+ F
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M +KG+K + I+  +++   C   K+ EA  +L+    +    +   Y ++I  Y
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                  +AL L ++MK   +  S  TYN ++ GL +S + ++A +++  L   G+ PD 
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            ++NTII   C++G  +KAL+   +M +   +P + TC+ L+S L   G +      ++ 
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            + K     S  Y  ++ +  +         L  EM EK +  D
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 172/361 (47%), Gaps = 20/361 (5%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMNTITLNTILHTLCCEKKLD 237
           G  PD   +N ++ A   AG+++ A  M+  MGR       +  + N ++  L    K  
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  + +     G   + ++Y T+I G+ +        +L D+M      P+  TYN ++
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLL 271

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL ++G+ ++   +++E+    M+PD  T++ +  G    G+ +  L    + ++K   
Sbjct: 272 SGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
               TC+ILL+GLC++G + KA + F   +  G    +V YNTLI+  C+ R L  AF +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             +M+ + + PD  TY A+   L +   + +A+     M ++G                 
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG----------------- 434

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +DPS  +++  I+ + + G+ +    +  + +QKGI  +  ++ +++    K  K I +A
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK-IPEA 493

Query: 538 V 538
           V
Sbjct: 494 V 494



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 143/303 (47%), Gaps = 23/303 (7%)

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAM 296
           A+ LL +A  R    D  ++  ++         + AL +   M   E    P  F+YN +
Sbjct: 144 AFGLLVAAGARP---DTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVV 200

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I GL +SGK   A+ + +E++  G+ P+  T+NT+I G    G +E   +  ++M+    
Sbjct: 201 IAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP 260

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           KP++VT N+LLSGLCR G +++               D  TY+ L   L +    +    
Sbjct: 261 KPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLS 320

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           L +E  +K +    YT + +   L + G++ +A++   ++V TG +              
Sbjct: 321 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLV-------------- 366

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
              P+++ Y+  IN +C     + A  IFE+ + + I  +  TY  L+NGL K  + ++K
Sbjct: 367 ---PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK-LEMVTK 422

Query: 537 AVD 539
           A D
Sbjct: 423 AED 425



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 21/134 (15%)

Query: 399 NTLISSLCKERRLED---AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           N L+ SL    R  D   AFGLL     +   PD + +  +  A V +G L+ A      
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGAR---PDTFAWNKVVQACVAAGDLDVALAMLRR 182

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M                ++     P + SY+  I      G+  DAL++F+E    G+A 
Sbjct: 183 M---------------GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAP 227

Query: 516 NKSTYMNLMNGLIK 529
           N+ TY  +++G +K
Sbjct: 228 NRITYNTMIDGHVK 241


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 259/546 (47%), Gaps = 32/546 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P   T N  L+AL + G+L+  R++  +M++ + +  N  +Y  ++   CK G +  
Sbjct: 180 GAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDA 239

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              ++  + +    P V TYN+L++  C +G +EEAFRL+  ME   + P VVT+  LIN
Sbjct: 240 GFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILIN 299

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                 R  E   ++ E+++ G+ PN V +N +I W+C++G   +A ++   M      P
Sbjct: 300 GLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKP 359

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE-KKLDEAYML 242
             VTYN +  A CK G ME A R+++ M   G+ ++    NT++  L    ++L+    +
Sbjct: 360 TAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSI 419

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N    RG   ++      +    +  K   A+ +W +   + +  +  T NA+I GL +
Sbjct: 420 TNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCE 479

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
               ++A  ++  +L  G+  D  T+N +I G C + ++E+A++ H  M  + FKPD+ T
Sbjct: 480 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 539

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N LL   C  G +E+          +G   D V+Y T+I   CK + +  A   L+E+ 
Sbjct: 540 FNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN------------ 470
           ++ L P+ + Y A+      +G +  A       VET K N   +QP             
Sbjct: 600 DRGLKPNVFIYNALIGGYGRNGDISGAID----AVETMKSNG--IQPTNVTYGSLMYWMC 653

Query: 471 ------------TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                       +      +D   I Y+  I  +C  G+  +A+  FEE R +GI+ NK 
Sbjct: 654 HAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKL 713

Query: 519 TYMNLM 524
           TY  LM
Sbjct: 714 TYTTLM 719



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 255/549 (46%), Gaps = 53/549 (9%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +Y  ++ AL K GK++   ++L+++ + GL P   TYN+L+   CK G ++EA R+   M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            Q    P V T+ +LING        E   + +EME L + P+ V YN LI      G  
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A +L DE+    +KP AVT+N++ K  CKEG++++A +I+ +M   G +  C  +NT+
Sbjct: 343 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402

Query: 192 ID------------------------------------ANCKAGNMEEAFRMMDVMGRKG 215
           +                                       CK G  +EA  +      KG
Sbjct: 403 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 462

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L +N  T N ++H LC  K + EA  ++ +   +G  LD ++Y  +I G  +D K   A+
Sbjct: 463 LGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 522

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           KL  +M  R   P  FT+N ++      GK E+   +L+++   G+ PD  ++ TII G 
Sbjct: 523 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 582

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C    + KA ++  +++++  KP++   N L+ G  R G +  A+    +    G    +
Sbjct: 583 CKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTN 642

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTY +L+  +C    +E+A  + S+  E  +      Y  +     + G++ EA  +   
Sbjct: 643 VTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEE 702

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M   G                 I P+ ++Y+  +  +   G  ++A ++F+E    G+  
Sbjct: 703 MRSRG-----------------ISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIP 745

Query: 516 NKSTYMNLM 524
           +  TY  L+
Sbjct: 746 DNITYGTLI 754



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 239/507 (47%), Gaps = 51/507 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P  VT+  +++ L +  +  EV  +L +M++ G+ PN   YN L+  +C+ G 
Sbjct: 282 MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 341

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+R+ D M   K  P   TYN++    C  G +E A R+ ++M S+ +      +NT
Sbjct: 342 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 401

Query: 121 LINRFFESGRSMEA-FKLIDELDEHGIKP------------------------------- 148
           ++    +  R +E+   + +E+   G++P                               
Sbjct: 402 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 461

Query: 149 ----NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
               N  T N +I   C+   + +A K+++ M   G   D +TYN +I   CK   MEEA
Sbjct: 462 GLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 521

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            ++   M R+G K +  T NT+LH  C   K++E + LL+     G   D VSYGT+I G
Sbjct: 522 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 581

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + + +   +A +   E+ +R + P+ F YNA+I G  ++G    AID +  +  +G+ P 
Sbjct: 582 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPT 641

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+ ++++  C  G VE+A    ++  E +    ++   I++ G C+ G + +A+ +F 
Sbjct: 642 NVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFE 701

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI-------- 436
               +G + + +TY TL+ +  K    E+A  L  EM    + PD  TY  +        
Sbjct: 702 EMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVN 761

Query: 437 -------HTALVESGRLEEAQKFTSIM 456
                  HTA + SG L +  +  +I+
Sbjct: 762 SLDKDIGHTAELSSGALTKDDRMYNIL 788



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 188/367 (51%), Gaps = 2/367 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P++      +  L K GK  E   +      +GL  N  T N L+ G C+  ++KEA
Sbjct: 427 GMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEA 486

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+  M       D  TYN++I G C    +EEA +L  +M      PD+ T+NTL++ 
Sbjct: 487 TKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHA 546

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G+  E F L+D++   G++P+ V++  +I  +CK   I KA + +  + + G  P+
Sbjct: 547 YCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPN 606

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN LI    + G++  A   ++ M   G++   +T  ++++ +C    ++EA  + +
Sbjct: 607 VFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFS 666

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            A +    L  + Y  +I GY +  K   A+  ++EM+ R I P+  TY  +++  S+SG
Sbjct: 667 QARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSG 726

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE-GQVEKALQFHNKMVEKSFKPDIVTC 363
            +E+A  + +E++ SG+IPD  T+ T+I   CSE   ++K +    ++   +   D    
Sbjct: 727 NSEEASKLFDEMVGSGVIPDNITYGTLI-ARCSEVNSLDKDIGHTAELSSGALTKDDRMY 785

Query: 364 NILLSGL 370
           NIL +G+
Sbjct: 786 NILSNGI 792



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 119/267 (44%), Gaps = 18/267 (6%)

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP-DETTFNTI 331
           RA   +  +  R   PS  T NA +  L ++G+ + A ++ +E+ +S  +  +E ++  +
Sbjct: 168 RAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAM 227

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C  G+V+   +   ++     +P +VT N+L+  LC+ G +E+A +        G 
Sbjct: 228 IKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM 287

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
               VT+  LI+ L +  R  +   +L EME+  + P+   Y  +       G   +A +
Sbjct: 288 TPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALR 347

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               MV                  +++ P++++Y+      C +G  + A +I E+    
Sbjct: 348 LFDEMVL-----------------KKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 390

Query: 512 GIAINKSTYMNLMNGLIKRRKSISKAV 538
           G+ ++   +  ++  L++R + +   V
Sbjct: 391 GMTVHCGLFNTVVAWLLQRTRRLESVV 417



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 24/222 (10%)

Query: 331 IIHGFC---SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +IH F    ++G + +A      +  +   P I TCN  L  L R G L+ A + F    
Sbjct: 153 LIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMR 212

Query: 388 -LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             +  A++  +Y  +I +LCK  +++  F +L+E+    L P   TY  +  AL +SGR+
Sbjct: 213 ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 272

Query: 447 EEAQKFTSIMVETGKINHQVVQ----PNTSKTPEE---------------IDPSSISYSE 487
           EEA +    M E G +   VV      N     E                + P+ + Y+E
Sbjct: 273 EEAFRLKGRM-EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNE 331

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I  HC +G    AL++F+E   K +     TY  +   L K
Sbjct: 332 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 373


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 228/433 (52%), Gaps = 1/433 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P + T+N ++  L +    ++   + +++K + +V +  ++ I++ G C+ G+  + 
Sbjct: 119 GHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKG 177

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++ ++ +    P+V  Y  LI+G C  G +  A  L  +M+ L L+P+  TY+ L+N 
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNG 237

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   E F++ + +   GI PNA  +N +I  YC  G +DKA K+   M E G +  
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACG 297

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI   C+     EA +++  + + GL  N +T N +++  C   K+D A  L N
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G     V+Y TLI GY + E    AL L  EM+ER I PS  TY  +I   ++  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            TE+A +M + + +SG++PD  T++ +IHG C  G +++A +    + E   +P+ V  N
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+EG   +AL+     +  G   +  ++ + I  LC++ + ++A  LL +M   
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINS 537

Query: 425 KLGPDRYTYAAIH 437
            L P    Y  +H
Sbjct: 538 GLKPSVSLYKMVH 550



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 194/360 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E FG  P+ V Y T++D   K G +   ++L   M + GLVPN  TY++L++G+ K G 
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGL 243

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +E  ++ + M ++  +P+ + YN LI+ +CN GM+++AF++  EM    +   V+TYN 
Sbjct: 244 QREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNI 303

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA KL+ ++++ G+ PN VT+NI+I  +C  GK+D A ++   ++ +G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VTYNTLI    K  N+  A  ++  M  + +  + +T   ++         ++A 
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKAC 423

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   K G   D  +Y  LI G         A KL+  + E  + P++  YN MI G 
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGY 483

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G + +A+ +LNE++ SGM+P+  +F + I   C + + ++A     +M+    KP +
Sbjct: 484 CKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV 543



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 176/331 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P+  TY+ +++  FK+G   E   +  +MK+ G+VPN   YN L+S YC  G 
Sbjct: 219 MDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGM 278

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A +V   M +      V TYN+LI G C      EA +L  ++  + L P++VTYN 
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F + G+   A +L ++L   G+ P  VT+N +I  Y K   +  A  +V+ MEE  
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTY  LIDA  +    E+A  M  +M + GL  +  T + ++H LC    + EA 
Sbjct: 399 IAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEAS 458

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  +     + V Y T+I GY ++  + RAL+L +EM    ++P+  ++ + I  L
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLL 518

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +  K ++A  +L +++ SG+ P  + +  +
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 213/448 (47%), Gaps = 36/448 (8%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y+ +V+ Y       +A+  +  M     +P   T+N L+     +   ++A+ +  E++
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           S K++ D  ++  +I    E+G  ++ F+L+  L+E G+ PN V +  +I   CK G + 
Sbjct: 152 S-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 168 KA----CKIVR-------------------------------NMEENGFSPDCVTYNTLI 192
            A    CK+ R                               NM+ +G  P+   YN LI
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C  G +++AF++   M  KG+    +T N ++  LC  KK  EA  L++  +K G  
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V+Y  LI G+    K + A++L++++K   + P+  TYN +I G S+      A+D+
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + E+ +  + P + T+  +I  F      EKA + H+ M +    PD+ T ++L+ GLC 
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G +++A K F+S        +SV YNT+I   CKE     A  LL+EM    + P+  +
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG 460
           + +    L    + +EA+     M+ +G
Sbjct: 511 FCSTIGLLCRDEKWKEAELLLGQMINSG 538



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 199/451 (44%), Gaps = 53/451 (11%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y+ ++N + ++   ++A      M     +P   T+N L+     S    +A+ + +EL 
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
              +  +A +  IMIK  C+ G   K  +++  +EE G SP+ V Y TLID  CK GN+ 
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  +   M R GL  N        HT                            Y  L+
Sbjct: 211 LAKNLFCKMDRLGLVPNP-------HT----------------------------YSVLM 235

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+F+        ++++ MK   I+P+ + YN +I      G  ++A  +  E+ + G+ 
Sbjct: 236 NGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIA 295

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
               T+N +I G C   +  +A++  +K+ +    P+IVT NIL++G C  G ++ A++ 
Sbjct: 296 CGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRL 355

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F      G +   VTYNTLI+   K   L  A  L+ EMEE+ + P + TY  +  A   
Sbjct: 356 FNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFAR 415

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
               E+A +  S+M ++G +                 P   +YS  I+  C  G  K+A 
Sbjct: 416 LNYTEKACEMHSLMEKSGLV-----------------PDVYTYSVLIHGLCVHGNMKEAS 458

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           ++F+   +  +  N   Y  +++G  K   S
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VTY  ++DA  +     +  ++ S M+K GLVP+  TY++L+ G C  G +KEA ++
Sbjct: 401 PSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKL 460

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              + +    P+   YN +I+G+C  G    A RL  EM    ++P+V ++ + I     
Sbjct: 461 FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCR 520

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
             +  EA  L+ ++   G+KP+   + ++ K
Sbjct: 521 DEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 127/316 (40%), Gaps = 56/316 (17%)

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIW-GLSQSGKTEQAIDMLNELLQSGMIPDETT 327
            +++ AL L  +M +     +   +N   + GL  +  +   I  LN LL SGM+P   +
Sbjct: 2   SQSHEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFI--LNHLLSSGMLPQAQS 59

Query: 328 --------------------------------FNTIIHGFCSEGQVEKALQFHNKMVEKS 355
                                           ++TI++ +      ++AL F + M+ + 
Sbjct: 60  LILRLISGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEG 119

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDA 414
             P   T N L+  L R    +KA   F    LK K V D+ ++  +I   C+       
Sbjct: 120 HVPLSNTFNNLMCLLIRSNYFDKAWWIFNE--LKSKVVLDAYSFGIMIKGCCEAGYFVKG 177

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH---------- 464
           F LL+ +EE  L P+   Y  +     + G +  A+     M   G + +          
Sbjct: 178 FRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNG 237

Query: 465 ---QVVQPNTSKTPEE-----IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
              Q +Q    +  E      I P++ +Y+  I+E+C+ G    A ++F E R+KGIA  
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACG 297

Query: 517 KSTYMNLMNGLIKRRK 532
             TY  L+ GL + +K
Sbjct: 298 VMTYNILIGGLCRGKK 313


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 202/357 (56%)

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V+D   + +  PDV TY +LI   C    + +A +L  EM S    PDVVTYN L+N 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  EA K ++ +  +G +PN +THNI+++  C  G+   A K++  M   G SP 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N LI+  C+ G +  A  +++ M   G   N+++ N +LH  C EKK+D A   L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG Y D V+Y T++T   +D K + A++L +++  +   P   TYN +I GLS+ G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT+QA+++L+E+   G+ PD  T++++I G   EG+VE+A++F + +     KP+  T N
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            ++ GLC+    ++A+ F    I KG     V+Y  LI  +  E   ++A  LL+E+
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 200/348 (57%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+  TY IL+   C    + +AM+++D M      PDV TYN+L+NG C  G L+EA + 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
              M S    P+V+T+N ++     +GR M+A KL+ E+   G  P+ VT NI+I + C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           +G + +A  I+  M  +G +P+ ++YN L+   CK   M+ A + +++M  +G   + +T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            NT+L  LC + K+D A  LLN  S +G     ++Y T+I G  +  K ++A++L  EM+
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            + + P   TY+++I GLS+ GK E+AI   +++   G+ P+  T+N+I+ G C   Q +
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +A+ F   M+ K  KP  V+  IL+ G+  EG+ ++AL+       +G
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 200/349 (57%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD +TY  +++A   +  + +   LL +M  +G  P+  TYN+LV+G CK G L EA+
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           + ++ M    S P+V T+N+++   C+ G   +A +L  EM      P VVT+N LIN  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G    A  +++++  HG  PN++++N ++  +CKE K+D+A + +  M   G  PD 
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYNT++ A CK G ++ A  +++ +  KG     IT NT++  L    K D+A  LL+ 
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +G   D ++Y +LI G  R+ K   A+K + +++   + P+ FTYN++++GL ++ +
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           T++AID L  ++  G  P E ++  +I G  +EG  ++AL+  N++  +
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 192/350 (54%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PDV+TY  LI          +A KL+DE+   G KP+ VT+N+++   CKEG++D+A K 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           + +M   G  P+ +T+N ++ + C  G   +A +++  M RKG   + +T N +++ LC 
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           +  L  A  +L      G   + +SY  L+ G+ +++K +RA++  + M  R   P   T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN M+  L + GK + A+++LN+L   G  P   T+NT+I G    G+ ++A++  ++M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K  KPD++T + L++GL REG +E+A+KFF      G   ++ TYN+++  LCK ++ +
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            A   L+ M  K   P   +Y  +   +   G  +EA +  + +   G +
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 197/385 (51%), Gaps = 18/385 (4%)

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            +++D   E    P+ +T+ I+I+  C E  + +A K++  M   G  PD VTYN L++ 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            CK G ++EA + ++ M   G + N IT N IL ++C   +  +A  LL    ++G    
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
            V++  LI    R     RA+ + ++M      P++ +YN ++ G  +  K ++AI  L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            ++  G  PD  T+NT++   C +G+V+ A++  N++  K   P ++T N ++ GL + G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
             ++A++       KG   D +TY++LI+ L +E ++E+A     ++E   + P+ +TY 
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
           +I   L ++ + + A  F + M+  G                   P+ +SY+  I    +
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKG-----------------CKPTEVSYTILIEGIAN 343

Query: 495 QGRYKDALQIFEETRQKGIAINKST 519
           +G  K+AL++  E   +G+ + KS+
Sbjct: 344 EGLAKEALELLNELCSRGV-VKKSS 367



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 155/287 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  P+ +T+N IL ++   G+  +   LL++M ++G  P+  T+NIL++  C+ G 
Sbjct: 77  MPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGL 136

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ +++ M  +   P+  +YN L++G+C    ++ A +  + M S    PD+VTYNT
Sbjct: 137 LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNT 196

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++    + G+   A +L+++L   G  P  +T+N +I    K GK D+A +++  M   G
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY++LI    + G +EEA +    +   G+K N  T N+I+  LC  ++ D A 
Sbjct: 257 LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAI 316

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L     +G    EVSY  LI G   +  A  AL+L +E+  R ++
Sbjct: 317 DFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 17/259 (6%)

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           +++ D   E++  P   TY  +I          QA+ +L+E+   G  PD  T+N +++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C EG++++A++F N M     +P+++T NI+L  +C  G    A K     + KG +  
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VT+N LI+ LC++  L  A  +L +M      P+  +Y  +     +  +++ A ++  
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           IMV  G                   P  ++Y+  +   C  G+   A+++  +   KG +
Sbjct: 181 IMVSRG-----------------CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS 223

Query: 515 INKSTYMNLMNGLIKRRKS 533
               TY  +++GL K  K+
Sbjct: 224 PVLITYNTVIDGLSKVGKT 242



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 82/154 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TYNT++D L K GK ++  +LL +M+ +GL P+  TY+ L++G  + G ++EA
Sbjct: 221 GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++    +      P+ +TYN ++ G C A   + A      M S    P  V+Y  LI  
Sbjct: 281 IKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
               G + EA +L++EL   G+   +    ++++
Sbjct: 341 IANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 262/508 (51%), Gaps = 23/508 (4%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV-VDLMTQNKSLPDVWTY 83
           K  E   L   M K G  P+ T Y+ +V  +CKL  L EA ++ +++  ++K+  +   +
Sbjct: 249 KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAW 308

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
              ++G C +G +E+AF   + M+   L      Y+ LI    ESGR  +A +   E+  
Sbjct: 309 TAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             I+P++ T + +I+  CK G++D A  ++  M + G+ PD  T++ LI+  CKA  ++E
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQE 427

Query: 204 AFRMMDVMGRK--GLKMNTITLNTILHTLCCEKKLDEAYMLLNS-ASKRGYYLDEVSYGT 260
           A   +  M RK      +  + N++L++LC  KK+ +A+ + ++  S+R +  D VSY  
Sbjct: 428 AQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI G+ + ++  RA KL+ +M +   +P+  TYNA + GL + G+   A  +  E++ +G
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
             PD  T++T+IHGF    + ++A +    M+ +  +P+ VT N LL GLC+E   ++A 
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           + FR  + +G   D VTY TL+   C   ++E A  +  EM  K   PD   Y  +    
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 667

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
             +G+  EA++   +MV                   +  P ++S++  I+      R  D
Sbjct: 668 FRAGKPGEAKQLFQVMVS-----------------RQCKPDTVSHNIMIDGLSKAKRLDD 710

Query: 501 ALQIFEETRQ-KGIAINKSTYMNLMNGL 527
           A+++FE   Q  G + +  TY +L+ GL
Sbjct: 711 AVEVFERMEQDHGCSPDLVTYNSLIFGL 738



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 228/433 (52%), Gaps = 4/433 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            Y+ ++  L + G++++  +   ++  + + P+  T + ++   CK G +  A+ +++ M
Sbjct: 341 VYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETM 400

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES--LKLLPDVVTYNTLINRFFESG 129
            +    PD+ T++MLIN  C A  ++EA    + M+           +YN+L+N   ++ 
Sbjct: 401 IKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAK 460

Query: 130 RSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           +  +AF +   +  E    P+ V+++I+I  +CK  ++ +A K+ + M +    P+  TY
Sbjct: 461 KVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 520

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N  ++   + G + +A  + + M   G   + IT +T++H     +K D+A+ L  +   
Sbjct: 521 NAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMIS 580

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   + V+Y  L+ G  ++ K + A +L+ +M ER   P   TY  +++G    GK EQ
Sbjct: 581 RGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQ 640

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++ +E++  G  PD   +N ++ GF   G+  +A Q    MV +  KPD V+ NI++ 
Sbjct: 641 AVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMID 700

Query: 369 GLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           GL +   L+ A++ F R     G + D VTYN+LI  LC E+RL +A  +  E++  KL 
Sbjct: 701 GLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLS 760

Query: 428 PDRYTYAAIHTAL 440
           PD + +  +  A+
Sbjct: 761 PDPHAFNVLLEAI 773



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 229/487 (47%), Gaps = 41/487 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP-NRTTYNILVSGYCKLGWLKE 63
           GC PD   Y+ ++ A  K   L+E   L  +M  +   P N   +   +SG CK G +++
Sbjct: 264 GCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQ 323

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A      M ++ S      Y+MLI     +G +++A     E+    + P   T +++I 
Sbjct: 324 AFEACRTMQESLS-SSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQ 382

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME------ 177
              ++GR   A  L++ + + G  P+  TH+++I   CK  KI +A + ++ M+      
Sbjct: 383 ELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSR 442

Query: 178 --------------------------------ENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                                           E  F PD V+Y+ LID  CK   +  A 
Sbjct: 443 SSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAE 502

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++   M       N  T N  L+ L  + ++ +A  +       G   D ++Y TLI G+
Sbjct: 503 KLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGF 562

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
               K ++A +L++ M  R   P+  TYN ++ GL +  K ++A ++  ++++ G  PD 
Sbjct: 563 SLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDR 622

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+ T+++GFC+ G++E+A++  ++MV K   PD+V  N LL G  R G   +A + F+ 
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTALVESG 444
            + +    D+V++N +I  L K +RL+DA  +   ME+     PD  TY ++   L    
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742

Query: 445 RLEEAQK 451
           RL EA K
Sbjct: 743 RLSEAMK 749



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 193/370 (52%), Gaps = 4/370 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ--GLVPNRTTYNILVSGYCKLGWLK 62
           G  PD  T++ +++ L K  K+ E ++ L  M ++      +  +YN L++  CK   + 
Sbjct: 404 GYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVH 463

Query: 63  EAMRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +A  +   M   +S +PDV +Y++LI+G+C    L  A +L K+M  L  +P+V TYN  
Sbjct: 464 QAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 523

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +N     GR  +A  + +E+   G  P+ +T++ +I  +    K D+A ++   M   G 
Sbjct: 524 LNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC 583

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTYN L+   CK    +EA  +   M  +G   + +T  T+L+  C   K+++A  
Sbjct: 584 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVE 643

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + +    +G+  D V+Y  L+ G+FR  K   A +L+  M  RQ  P T ++N MI GLS
Sbjct: 644 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLS 703

Query: 302 QSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++ + + A+++   + Q  G  PD  T+N++I G C E ++ +A++   ++      PD 
Sbjct: 704 KAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDP 763

Query: 361 VTCNILLSGL 370
              N+LL  +
Sbjct: 764 HAFNVLLEAI 773



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 205/402 (50%), Gaps = 4/402 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + T ++++  L K G+++    LL  M K+G  P+  T+++L++  CK   ++EA   
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431

Query: 68  VDLMTQN--KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINR 124
           +  M +         ++YN L+N  C A  + +AF +   M S +  +PDVV+Y+ LI+ 
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDG 491

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +      A KL  ++ +    PN  T+N  +    ++G+I  A  +   M   G SPD
Sbjct: 492 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY+TLI     A   ++A  + + M  +G + N +T N +LH LC E K DEA+ L  
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG   D V+Y TL+ G+    K  +A++++DEM  +   P    YN ++ G  ++G
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 671

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM-VEKSFKPDIVTC 363
           K  +A  +   ++     PD  + N +I G     +++ A++   +M  +    PD+VT 
Sbjct: 672 KPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 731

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           N L+ GLC E  L +A+K F+       + D   +N L+ ++
Sbjct: 732 NSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/543 (21%), Positives = 233/543 (42%), Gaps = 58/543 (10%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           TYN L+    +   LK+A +V + M     +P+ +TY +L+   C     +EA R   EM
Sbjct: 131 TYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEM 190

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
                 P    Y  +      +G+  E  ++     E  +    +    ++  +  + K 
Sbjct: 191 VDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKA 250

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM-MDVMGRKGLKMNTITLNT 225
            +A K+ R M ++G  PD   Y+ ++ A+CK  N++EAF++ +++       +N +    
Sbjct: 251 IEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTA 310

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
            L  LC   K+++A+    +  +      +  Y  LI       + ++A +   E+  R 
Sbjct: 311 FLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRN 369

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT------------------ 327
           I PS+ T +++I  L ++G+ + A+ +L  +++ G  PD  T                  
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429

Query: 328 -------------------FNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDIVTCNILL 367
                              +N++++  C   +V +A    + MV E+SF PD+V+ +IL+
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   L +A K ++  I      +  TYN  ++ L ++ R+ DA G+  EM      
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---------KINHQVVQPNTSKTPEEI 478
           PD  TY+ +      + + ++A +    M+  G          + H + + +      E+
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 609

Query: 479 ---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                    DP  ++Y+  +   C+ G+ + A+++F+E   KG   +   Y  L+ G  +
Sbjct: 610 FRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFR 669

Query: 530 RRK 532
             K
Sbjct: 670 AGK 672



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 119/233 (51%), Gaps = 1/233 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD +TY+T++       K ++  +L   M  +G  PN  TYN L+ G CK   
Sbjct: 543 MVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  +   M +    PD  TY  L+ G+CN G +E+A  +  EM S    PDVV YN 
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNC 662

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN- 179
           L+  FF +G+  EA +L   +     KP+ V+HNIMI    K  ++D A ++   ME++ 
Sbjct: 663 LLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 722

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           G SPD VTYN+LI   C    + EA ++   + R  L  +    N +L  + C
Sbjct: 723 GCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKC 775



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 204/473 (43%), Gaps = 55/473 (11%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           EA    + +++     DV TYN L+++        +A ++ +++   G+ PN  T+ +++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           +  C E   D+A +    M + GF P    Y  + +     G   E  R+      K + 
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
           +  +    +L     + K  EA  L  +  K G   D   Y  ++  + + E  + A KL
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 278 WDEMKERQIMP-STFTYNAMIWGLSQSGKTEQAI-----------------DMLNELL-Q 318
           + EM      P +   + A + GL +SGK EQA                  DML  LL +
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIE 351

Query: 319 SGMI----------------PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           SG I                P   T +++I   C  G+V+ AL     M+++ + PD+ T
Sbjct: 352 SGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMAT 411

Query: 363 CNILLSGLCREGILEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            ++L++ LC+   +++A +F +    K   ++    +YN+L++SLCK +++  AF + S 
Sbjct: 412 HSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFST 471

Query: 421 M-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           M  E+   PD  +Y+ +     +   L  A+K    M++   +                 
Sbjct: 472 MVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV----------------- 514

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P+  +Y+  +N    +GR  DA  ++EE    G + +  TY  L++G    RK
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARK 567


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 241/465 (51%), Gaps = 6/465 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  +YN ++  L++ GK ++   +  +M   G+VPN  TYN ++ G+ K G L+   R+
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M  +   P++ TYN+L++G C AG ++E   L  EM S  + PD  TY+ L +    
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  E  + G+   A T +I++   CK+GK+ KA +++  +   G  P  V 
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+  ++  AF + + M  + ++ + IT N +++ LC  + + +A  L+    
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G      ++ TLI  Y    +  +   +  +M+++ I     ++ +++    ++GK  
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L++++   + P+   +N+II  +   G  E+A     KM        IVT N+LL
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCR   +++A +   +   +G   D V+YNT+IS+ C +   + A  LL EM +  + 
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           P   TY  + +AL  +GR+ + +     M+      H+ V+P++S
Sbjct: 612 PTLRTYHTLVSALASAGRVHDMECLYQQML------HKNVEPSSS 650



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 254/523 (48%), Gaps = 19/523 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP   + N +L++L   G+  +VR     +   G  P+   +N +V      G L  A+ 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 67  VVDLM--TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +V  M  ++    PD ++YN++I G   +G   +A ++  EM  + ++P+ +TYNT+I+ 
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G     F+L D++   G KPN VT+N+++   C+ G++D+   ++  M  +   PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+ L D   + G       +     +KG+ +   T + +L+ LC + K+ +A  +L 
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G     V Y TLI GY +      A  ++++MK R I P   TYNA+I GL +  
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A D++ E+ +SG+ P   TFNT+I  + + GQ+EK     + M +K  K D+++  
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++   C+ G + +A+      I K  A ++  YN++I +  +    E AF L+ +M+  
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 538

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +     TY  +   L  S +++EA++    +   G                 + P  +S
Sbjct: 539 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG-----------------LRPDVVS 581

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I+  C++G    AL++ +E  + GI     TY  L++ L
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 624



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 219/464 (47%), Gaps = 35/464 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P+ +TYNT++D   K G L     L   M   G  PN  TYN+L+SG C+ G 
Sbjct: 220 MVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGR 279

Query: 61  LKEAMRVVDLMTQNKSLPDVWTY-----------------------------------NM 85
           + E   ++D M  +   PD +TY                                   ++
Sbjct: 280 MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 339

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+NG C  G + +A ++ + +    L+P  V YNTLIN + +      AF + +++    
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+P+ +T+N +I   CK   + KA  +V  ME++G  P   T+NTLIDA   AG +E+ F
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M +KG+K + I+  +++   C   K+ EA  +L+    +    +   Y ++I  Y
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                  +A  L ++MK   +  S  TYN ++ GL +S + ++A +++  L   G+ PD 
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            ++NTII   C++G  +KAL+   +M +   +P + T + L+S L   G +      ++ 
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            + K     S  Y  ++ +  +         L  EM EK +  D
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 169/361 (46%), Gaps = 20/361 (5%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMNTITLNTILHTLCCEKKLD 237
           G  PD   +N ++ A   AG+++ A  M+  MGR       +  + N ++  L    K  
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  + +     G   + ++Y T+I G+ +        +L D+M      P+  TYN ++
Sbjct: 212 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 271

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL ++G+ ++   +++E+    M PD  T++ +  G    G+    L    + ++K   
Sbjct: 272 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
               TC+ILL+GLC++G + KA +     +  G    +V YNTLI+  C+ R L  AF +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             +M+ + + PD  TY A+   L    +LE   K   +++E  K                
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLC---KLEMVTKAEDLVMEMEK--------------SG 434

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           +DPS  +++  I+ + + G+ +    +  + +QKGI  +  ++ +++    K  K I +A
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK-IPEA 493

Query: 538 V 538
           V
Sbjct: 494 V 494



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 23/303 (7%)

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAM 296
           A+ LL +A  R    D  ++  ++         + AL +   M   E    P  F+YN +
Sbjct: 144 AFGLLVAAGARP---DTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVV 200

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I GL +SGK   A+ + +E++  G++P+  T+NT+I G    G +E   +  ++M+    
Sbjct: 201 IAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP 260

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           KP+IVT N+LLSGLCR G +++               D  TY+ L   L +         
Sbjct: 261 KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLS 320

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           L +E  +K +    YT + +   L + G++ +A++   ++V TG +              
Sbjct: 321 LFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV-------------- 366

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
              P+++ Y+  IN +C     + A  IFE+ + + I  +  TY  L+NGL K  + ++K
Sbjct: 367 ---PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK-LEMVTK 422

Query: 537 AVD 539
           A D
Sbjct: 423 AED 425


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 204/368 (55%), Gaps = 37/368 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ VTYNT++     +G++    +++ +M+++G + P++ TY  ++SG+CK+G +++A +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATK 204

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V D ++T+ K  P+   YN LI G+C+ G LE A R R EM    +   V TYN  ++  
Sbjct: 205 VFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--------- 176
           F  GR+ EA  L++E+ E G+ P+A T+NI+I  YCKEGK  KA K+   M         
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324

Query: 177 --------------------------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
                                        G  PD   YN LI+++C  G+M+ AF +M  
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M +K +  + +T NT++  LC   +LDEA  L+   +KRG   D VSY TLI+GY     
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A+K+ DEM  +   P+  TYNAMI GL  +G+   A D++ E++ +G+ PD++T+ +
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYIS 504

Query: 331 IIHGFCSE 338
           +I G  +E
Sbjct: 505 LIEGLTTE 512



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L   GK     +LL  M      PN  TYN +++G+C  G ++  + ++  M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYNTLINRFFESG 129
            +   + PD +TY  +I+GWC  G +E+A ++  EM +  K+ P+ V YN LI  + + G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
               A +   E+ + G+     T+N+ +     EG+  +A  +V  M E G +PD  TYN
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+  CK G  ++A +M +VM  KG++   +T  +++H L  +  + E   L N A +R
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRR 353

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D   Y  LI  +      +RA ++  EM++++I P   TYN ++ GL   G+ ++A
Sbjct: 354 GIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEA 413

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             ++ E+ + G+ PD  ++NT+I G+  +G ++ A++  ++M+ K F P ++T N ++ G
Sbjct: 414 RGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKG 473

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           LC  G    A    +  +  G   D  TY +LI  L  E
Sbjct: 474 LCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 195/381 (51%), Gaps = 6/381 (1%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C AG    A  L ++M S    P+ VTYNT+I  F   GR     +++ E+
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 142 DEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLIDANCKAG 199
            E G I P+  T+  +I  +CK GK++ A K+   M  E    P+ V YN LI   C  G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           N+E A R    M  +G+ M   T N  +HTL  E +  EA+ L+    ++G   D  +Y 
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI GY ++ K  +A+K+++ M  + I  +  TY ++I  LS  G  ++   + N+ ++ 
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRR 353

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD   +N +I+  C+ G +++A +   +M +K   PD VT N L+ GLC  G L++A
Sbjct: 354 GIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEA 413

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                    +G   D V+YNTLIS    +  ++DA  +  EM  K   P   TY A+   
Sbjct: 414 RGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKG 473

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L  +G+  +A+     MV  G
Sbjct: 474 LCLNGQGGDAEDLVKEMVGNG 494



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 210/407 (51%), Gaps = 6/407 (1%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L +D+ +  L  + TT+NI++   C  G   + +R ++L+ Q  S P+  TYN +I G+C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAG---KPVRALELLRQMPS-PNAVTYNTVIAGFC 158

Query: 92  NAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE-LDEHGIKPN 149
             G ++    + +EM E   + PD  TY T+I+ + + G+  +A K+ DE L E  ++PN
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           AV +N +I  YC +G ++ A +    M + G S    TYN  +      G   EA  +++
Sbjct: 219 AVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVE 278

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            MG KGL  +  T N +++  C E K  +A  +      +G     V+Y +LI       
Sbjct: 279 EMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKG 338

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
                 +L+++   R I P  F YNA+I      G  ++A +++ E+ +  + PD+ T+N
Sbjct: 339 MVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYN 398

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G C  G++++A     +M ++  +PD+V+ N L+SG   +G ++ A+K     + K
Sbjct: 399 TLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGK 458

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           G     +TYN +I  LC   +  DA  L+ EM    + PD  TY ++
Sbjct: 459 GFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISL 505



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 203/430 (47%), Gaps = 56/430 (13%)

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           AF L  ++  L+L     T+N ++     +G+ + A +L+ ++      PNAVT+N +I 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIA 155

Query: 159 WYCKEGKIDKACKIVRNMEE-NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
            +C  G++    +I+R M E  G +PD  TY T+I   CK G +E+A ++ D M      
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEM------ 209

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
                          E K++                + V Y  LI GY        AL+ 
Sbjct: 210 -------------LTEGKVEP---------------NAVMYNALIGGYCDQGNLEVALRY 241

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             EM +R +  +  TYN  +  L   G+  +A  ++ E+ + G+ PD  T+N +I+G+C 
Sbjct: 242 RGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCK 301

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           EG+ +KA++    MV K  +  +VT   L+  L  +G++++  + F   + +G   D   
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFM 361

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN LI+S C    ++ AF ++ EME+K++ PD  TY  +   L   GRL+EA+     M 
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           + G                 I P  +SY+  I+ +  +G  KDA+++ +E   KG     
Sbjct: 422 KRG-----------------IQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTL 464

Query: 518 STYMNLMNGL 527
            TY  ++ GL
Sbjct: 465 LTYNAMIKGL 474



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 106/194 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G     VTY +++ AL  KG + E   L +D  ++G+ P+   YN L++ +C  G 
Sbjct: 315 MVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGD 374

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  ++  M + +  PD  TYN L+ G C  G L+EA  L +EM    + PD+V+YNT
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +   G   +A K+ DE+   G  P  +T+N MIK  C  G+   A  +V+ M  NG
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494

Query: 181 FSPDCVTYNTLIDA 194
            +PD  TY +LI+ 
Sbjct: 495 ITPDDSTYISLIEG 508



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 27/274 (9%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L+T          +L L+  +K   +   T + + ++  L  +     A  +  ++ +  
Sbjct: 56  LLTASVAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPA----PAFVLFADIFRLR 111

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +    TTFN ++   C+ G+  +AL+   +M      P+ VT N +++G C  G ++  +
Sbjct: 112 LPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGI 167

Query: 381 KFFRSWILKGK-AVDSVTYNTLISSLCKERRLEDAFGLLSEM-EEKKLGPDRYTYAAIHT 438
           +  R    +G  A D  TY T+IS  CK  ++EDA  +  EM  E K+ P+   Y A+  
Sbjct: 168 EIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIG 227

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
              + G LE A ++   MV+ G                 +  +  +Y+  ++    +GR 
Sbjct: 228 GYCDQGNLEVALRYRGEMVDRG-----------------VSMTVATYNLFVHTLFMEGRA 270

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +A  + EE  +KG+A +  TY  L+NG  K  K
Sbjct: 271 AEAHALVEEMGEKGLAPDAFTYNILINGYCKEGK 304


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 274/567 (48%), Gaps = 46/567 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +     K+ +++ V  L  DM    + P   T+N+L+S  C++G+L+ A  V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M++    P+ ++  +L+ G+C AG+      L  EM S   LP+ V YNT+I+    
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---EENGFS-P 183
            G+++EA KL++++ E G+ P+ VT N  I   CK G+I +A +I R+M   EE G   P
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN +++  C  G  EEA  + D M +    ++  + N  +  L    KL EA+++L
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLIL 354

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N  +++    +  SY  L+ G  +    + A  +   M+E  + P T TY+ ++ G  + 
Sbjct: 355 NEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A  +L E++Q G  P+  T N ++H    EG+  +A      M E+ +  D VTC
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTC 474

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
           N +++GLC+ G L+KA++       +G A                        DS+TY T
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYAT 534

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +I  LCK  R+++A   L EM  KKL PD   +        + G+L  A +    M + G
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594

Query: 461 -----KINHQVVQPNTSKTP-------------EEIDPSSISYSEKINEHCSQGRYKDAL 502
                +  + ++Q   S+                 I P+  +Y+  I+     G+ KDA 
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
            + +E  QKGI+ N  T+  L+    K
Sbjct: 655 CLLDEMLQKGISPNIYTFRILIGAFFK 681



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 280/574 (48%), Gaps = 45/574 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LP+ V YNT++ +L  +G+  E   L+  M++ GL P+  T+N  ++  CK G 
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273

Query: 61  LKEAMRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + EA R+   M  ++ +    P+  TYN+++ G+C+ GM EEA  +   M++ + L  + 
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL-SLR 332

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           +YN  +     SG+ +EA  +++E+ E  IKPN  ++NI++   CK G    A  I+  M
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
            E+G +PD VTY+TL+   C+ G + EA  ++  M + G   N  T N +LH+L  E + 
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER------------ 284
            EA  LL   ++RGY LD V+  T+I G  +    ++A+++   M  R            
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 285 -----------QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
                      + +P + TY  +I GL + G+ ++A   L E++   + PD   F+T I+
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIY 572

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            +C +G++  A +   +M +K     + T N L+ GL  E  + +          +G   
Sbjct: 573 NYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFP 632

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +  TYN +IS L +  +L+DA  LL EM +K + P+ YT+  +  A  ++     AQ+  
Sbjct: 633 NVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692

Query: 454 SIMVE---------TGKINHQVVQPNTSKTPEEIDPS--------SISYSEKINEHCSQG 496
            I +          +   N  +    T K  E  + +        +  Y + I + C  G
Sbjct: 693 EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDG 752

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +  DA  I  +   K  + + +++M +++ L KR
Sbjct: 753 KLDDASFILHKMMDKQYSFDPASFMPVIDELGKR 786



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 242/474 (51%), Gaps = 32/474 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  +  L + GKL E   +L++M ++ + PN  +YNILV G CK G   +A  ++ LM
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            ++   PD  TY+ L++G+C  G + EA  + +EM  +   P++ T N L++  ++ GR+
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--------- 182
            EA  L+  ++E G   + VT N MI   CK G +DKA +IV  M   G +         
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 183 --------------PDCVTYNTLIDANCKAGNMEEA-FRMMDVMGRKGLKMNTITLNTIL 227
                         PD +TY T+I   CK G ++EA  ++++++G+K L  +++  +T +
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKK-LSPDSLIFDTFI 571

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           +  C + KL  A+ +L    K+G      +Y +LI G   + +      L DEMKER I 
Sbjct: 572 YNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIF 631

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF---CSEGQVEKA 344
           P+ +TYN +I  LS+ GK + A  +L+E+LQ G+ P+  TF  +I  F   C  G  ++ 
Sbjct: 632 PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQEL 691

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +    +            N LL+G    G   KA + F + + +  A+ +  Y  LI  
Sbjct: 692 FEIALSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEK 747

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           LCK+ +L+DA  +L +M +K+   D  ++  +   L + G    A +F   M+E
Sbjct: 748 LCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 189/404 (46%), Gaps = 30/404 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+T+L    ++GK+ E   +L +M + G  PN  T NIL+    K G   EA
Sbjct: 396 GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEA 455

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-----ESL---------- 109
             ++ +M +     D  T N +ING C AG L++A  +   M      SL          
Sbjct: 456 EDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDL 515

Query: 110 --------KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
                   K LPD +TY T+I    + GR  EA K + E+    + P+++  +  I  YC
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K+GK+  A ++++ ME+ G +    TYN+LI        + E + +MD M  +G+  N  
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD-- 279
           T N I+  L    KL +A  LL+   ++G   +  ++  LI  +F+      A +L++  
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIA 695

Query: 280 -EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
             +   +    +F +N ++ G    G+T +A ++    L   +      +  +I   C +
Sbjct: 696 LSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKD 751

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           G+++ A    +KM++K +  D  +   ++  L + G    A +F
Sbjct: 752 GKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEF 795



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 14/297 (4%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  CLPD++TY TI+  L K G+++E +  L +M  + L P+   ++  +  YCK G L 
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A RV+  M +      + TYN LI G  +   + E + L  EM+   + P+V TYN +I
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY---CKEGKIDKACKIVRNMEEN 179
           +   E G+  +A  L+DE+ + GI PN  T  I+I  +   C  G   +  +I  ++  +
Sbjct: 642 SCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGH 701

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             S     +N L+      G   +A  + +    + L +       ++  LC + KLD+A
Sbjct: 702 KESLYSFMFNELL----AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDA 757

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK-LWDEMKERQI-MPSTFTYN 294
             +L+    + Y  D  S+  +I     DE   R  K   DE  ER + M S   +N
Sbjct: 758 SFILHKMMDKQYSFDPASFMPVI-----DELGKRGSKHAADEFAERMMEMASETDFN 809


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 266/523 (50%), Gaps = 22/523 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++ AL  +G++ +   +L DM ++G  P    Y++ +   C+    + A+ V
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR-LRKEMESLKLLPDVVTYNTLINRF 125
           + DL  +  +L DV   N+++   C+ G ++EA R LR  + S    PDVV+YN ++   
Sbjct: 169 LRDLHGRGCAL-DVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             + R      L++E+   G  PN VT + +I   C+ G  ++  ++   M E+G +PD 
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDV 287

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             Y T+ID  CK   +E A  +++ M   GL  N +  NT+L  LC   + +EA  LL  
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +   LD+V++  L+    ++   +R +++ ++M E   MP   TY  +I G  + G 
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A+ +L  +   G  P+  ++  ++ G CS  +   A +  ++M+++   P+ VT N 
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++ LC++G++E+A++  +  ++ G + D ++Y+T+I  L K    ++A  LL+ M +K 
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 426 LGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           + P+   Y++I +AL   GR+ +  Q F +I            Q  T ++       ++ 
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENI------------QDTTVRS------DAVL 569

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I+  C +G    A++        G   N+STY  L+ GL
Sbjct: 570 YNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 223/424 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  FGC PD V+YN +L  L    +   V+DL+ +M   G  PN  T++ L+   C+ G 
Sbjct: 208 LPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGL 267

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +    V   M ++   PDV  Y  +I+G C    LE A  +   M S  L P+VV YNT
Sbjct: 268 FERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNT 327

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     + R  EA  L+ E+ +     + VT NI++ + C+ G +D+  +++  M E+G
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY T+I+  CK G ++EA  ++  M   G + NT++   +L  LC  ++  +A 
Sbjct: 388 CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAE 447

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   ++G   + V++ TLI    +     +A++L  +M      P   +Y+ +I GL
Sbjct: 448 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 507

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G T++A+++LN +++ GM P+   +++I      EG++ K +Q    + + + + D 
Sbjct: 508 GKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDA 567

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N ++S LC+ G  ++A++F    +  G   +  TY  LI  L  E  +++A  +L+E
Sbjct: 568 VLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTE 627

Query: 421 MEEK 424
           +  K
Sbjct: 628 LCSK 631



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 250/509 (49%), Gaps = 18/509 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P    Y+  L+A  +         +L D+  +G   +    N+++   C  G + EA
Sbjct: 141 GCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEA 200

Query: 65  MRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +R++ DL+      PDV +YN ++ G C A        L +EM +    P++VT++TLI 
Sbjct: 201 VRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIG 260

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               +G      ++  ++ EHG  P+   +  +I   CKE +++ A  I+  M   G SP
Sbjct: 261 HLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSP 320

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V YNTL+   C A   EEA  ++  M  K   ++ +T N ++  LC    +D    +L
Sbjct: 321 NVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVL 380

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   D ++Y T+I G+ ++   + A+ L   M      P+T +Y  ++ GL  +
Sbjct: 381 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSA 440

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            +   A +++++++Q G  P+  TFNT+I+  C +G VE+A++   +M+     PD+++ 
Sbjct: 441 ERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 500

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + ++ GL + G  ++AL+     + KG + +++ Y+++ S+L  E R+     +   +++
Sbjct: 501 STVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQD 560

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             +  D   Y A+ ++L + G  + A +F + MV +G +      PN S           
Sbjct: 561 TTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCV------PNES----------- 603

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKG 512
           +Y+  I    S+G  K+A +I  E   KG
Sbjct: 604 TYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 230/469 (49%), Gaps = 1/469 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLG 59
           + G GC  D    N +L A+  +G ++E   LL D+    G  P+  +YN ++ G C   
Sbjct: 172 LHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMAR 231

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
                  +++ M      P++ T++ LI   C  G+ E    +  +M      PDV  Y 
Sbjct: 232 RWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYA 291

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+I+   +  R   A  +++ +  +G+ PN V +N ++K  C   + ++A  ++  M + 
Sbjct: 292 TIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK 351

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
               D VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA
Sbjct: 352 DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 411

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL S +  G   + VSY  ++ G    E+   A +L  +M ++   P+  T+N +I  
Sbjct: 412 VMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINF 471

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  EQAI++L ++L +G  PD  +++T+I G    G  ++AL+  N MV+K   P+
Sbjct: 472 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPN 531

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +  + + S L  EG + K ++ F +        D+V YN +ISSLCK    + A   L+
Sbjct: 532 TIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLA 591

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            M      P+  TY  +   L   G ++EAQ+  + +   G +   +++
Sbjct: 592 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHLMK 640



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 222/519 (42%), Gaps = 91/519 (17%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           YN ++ G+C AG   +    R+   S+ + P+  TY  L+      GR  +A  ++D++ 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 143 EHGIKPNAVTH-----------------------------------NIMIKWYCKEGKID 167
             G  P    +                                   N++++  C +G +D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 168 KACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           +A +++R++  + G  PD V+YN ++   C A        +M+ M   G   N +T +T+
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +  LC     +  + +    ++ G   D   Y T+I G  ++E+   A  + + M    +
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 287 MPSTFTYNAMIWG-----------------------------------LSQSGKTEQAID 311
            P+   YN ++ G                                   L Q+G  ++ I+
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L ++L+ G +PD  T+ T+I+GFC EG +++A+     M     +P+ V+  I+L GLC
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
                  A +     I +G   + VT+NTLI+ LCK+  +E A  LL +M      PD  
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 498

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           +Y+ +   L ++G  +EA +  ++MV+ G                 + P++I YS   + 
Sbjct: 499 SYSTVIDGLGKAGNTDEALELLNVMVKKG-----------------MSPNTIIYSSIASA 541

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              +GR    +Q+FE  +   +  +   Y  +++ L KR
Sbjct: 542 LSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKR 580


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 271/536 (50%), Gaps = 27/536 (5%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P   TYN ++D   +  + +    L   + + GL  ++ T N L+   C     +EA+ 
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 67  VV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLIN 123
           V+   M++   +P+  +Y++++   C+  M + A  L + M  +     PDVV Y+T+I+
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF  G + +A  L  E+   G+KP+ VT+N++I   CK   +DKA  ++R M  +G  P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY+ +I      G ++EA +M   M ++GL  N +T N+ L +LC   +  EA    
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S + +G+  D  SY TL+ GY  +      + L++ MK   I  +   +  +I   ++ 
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKR 453

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  + A+ +  E+ Q G+ PD  T++T+I  F   G++  A++  N+MV +  +P+    
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 364 NILLSGLCREGILEKALKFFRSWILKG-KAVDSVTYNTLISSLCKERRLEDA---FGLLS 419
           + ++ G C  G L KA +     I KG    D V ++++I+SLCK+ R+ DA   F L +
Sbjct: 514 SSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLAT 573

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           ++ E+   P   T+ ++       G++++A K    M   G                 ++
Sbjct: 574 DIGER---PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVG-----------------VE 613

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           P  ++Y+  ++ +   GR  D L +F E ++KG+  N  TY  ++ GL +  ++++
Sbjct: 614 PDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 232/463 (50%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC+P+ V+Y+ +L AL          DLL  M KQG    P+   Y+ ++ G+   
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G   +A  +   MT+    PDV TYN++I+  C A  +++A  + ++M +    PD VTY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + +I+ +   GR  EA K+  E+ + G+ PN VT N  +   CK G+  +A +   +M  
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTA 398

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD  +Y TL+      G   +   + + M   G+  N      ++H       +D+
Sbjct: 399 KGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDD 458

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++     ++G   D V+Y T+I+ + R  +   A++ +++M  R I P+T  Y+++I 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQ 518

Query: 299 GLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           G    G   +A ++++E++  G+  PD   F+++I+  C +G+V  A    +   +   +
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGER 578

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P ++T N L+ G C  G ++KA K   +  + G   D VTYNTL+    K  R+ D   L
Sbjct: 579 PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTL 638

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM+ K + P+  TY  +   L  +GR   A+K    M+E+G
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 243/486 (50%), Gaps = 36/486 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+ ++      G+L E   +  +MKK+GL+PN  T N  ++  CK G  KEA
Sbjct: 330 GAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEA 389

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGW----CNA--------------------------- 93
               D MT     PD+++Y  L++G+    C A                           
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449

Query: 94  ----GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
               GM+++A  +  EM+   + PDVVTY+T+I+ F   GR  +A +  +++   GI+PN
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-PDCVTYNTLIDANCKAGNMEEAFRMM 208
              ++ +I+ +C  G + KA ++V  M   G   PD V ++++I++ CK G + +A  + 
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D+    G +   IT N+++   C   K+D+A+ +L++    G   D V+Y TL+ GYF++
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKN 629

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            + N  L L+ EM+ + + P+T TY  M+ GL ++G+T  A    +E+++SG     + +
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             I+ G C     ++A+    K+   + K  I   N +++ + +    E+A + F +   
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   +  TY  +I +L K+  +EDA  + S ME+  + P       I   L+E G + +
Sbjct: 750 SGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAK 809

Query: 449 AQKFTS 454
           A  + S
Sbjct: 810 AGNYLS 815



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 244/532 (45%), Gaps = 71/532 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V Y+T++   F +G+  +   L  +M +QG+ P+  TYN+++   CK   +
Sbjct: 257 QGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAM 316

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  V+  MT + + PD  TY+ +I+G+   G L+EA ++ +EM+   L+P++VT N+ 
Sbjct: 317 DKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSF 376

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKP------------------------------NAV 151
           +    + GRS EA +  D +   G KP                              N +
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436

Query: 152 THN-----IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
             N     I+I  Y K G +D A  I   M++ G SPD VTY+T+I    + G + +A  
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY-YLDEVSYGTLITGY 265
             + M  +G++ NT   ++I+   C    L +A  L++    +G    D V + ++I   
Sbjct: 497 KFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSL 556

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +D +   A  ++D   +    P   T+N++I G    GK ++A  +L+ +   G+ PD 
Sbjct: 557 CKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDI 616

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+NT++ G+   G++   L    +M  K  KP+ VT  I+L+GL R G    A K F  
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 386 WILKGKAVDSVTY-----------------------------------NTLISSLCKERR 410
            I  G  V    Y                                   NT+I+++ K +R
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            E+A  L + +    L P+  TY  +   L++ G +E+A    S M ++G +
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIV 788



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 211/423 (49%), Gaps = 10/423 (2%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            +  ++ A  K+G +++   + ++M++QG+ P+  TY+ ++S + ++G L +AM   + M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-LPDVVTYNTLINRFFESGR 130
                 P+   Y+ +I G+C  G L +A  L  EM +  +  PD+V ++++IN   + GR
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            M+A  + D   + G +P  +T N +I  YC  GK+DKA KI+  ME  G  PD VTYNT
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+D   K G + +   +   M RKG+K NT+T   +L  L    +   A    +   + G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             +    YG ++ G  R+  A+ A+ L+ ++    +  S    N MI  + +  + E+A 
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++   +  SG++P+E+T+  +I     +G VE A    + M +    P     N ++  L
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
             +G + KA  +      K   +++ T + ++S   ++ + +         E+ KL P +
Sbjct: 802 LEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQ---------EDIKLLPAK 852

Query: 431 YTY 433
           Y +
Sbjct: 853 YQF 855



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 188/385 (48%), Gaps = 3/385 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTY+T++    + G+L +  +  + M  +G+ PN   Y+ ++ G+C  G 
Sbjct: 466 MQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGG 525

Query: 61  LKEAMRVVDLMTQNKSLP--DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           L +A  +V  M  NK +P  D+  ++ +IN  C  G + +A  +      +   P V+T+
Sbjct: 526 LVKAKELVSEMI-NKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITF 584

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N+LI+ +   G+  +AFK++D ++  G++P+ VT+N ++  Y K G+I+    + R M+ 
Sbjct: 585 NSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQR 644

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+ VTY  ++    +AG    A +    M   G  +       IL  LC     DE
Sbjct: 645 KGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADE 704

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A +L                 T+I   ++ ++   A +L+  +    ++P+  TY  MI 
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMII 764

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G  E A +M + + +SG++P     N II     +G++ KA  + +K+  K    
Sbjct: 765 NLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILL 824

Query: 359 DIVTCNILLSGLCREGILEKALKFF 383
           +  T +++LS   R+G  ++ +K  
Sbjct: 825 EASTTSLMLSLFSRKGKYQEDIKLL 849



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 58/309 (18%)

Query: 279 DEMKERQIMPSTFTYNAMI----------WGLSQSG------------------------ 304
           +E   +  +P+  TYN ++           GL+  G                        
Sbjct: 146 EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA 205

Query: 305 -KTEQAID-MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK--SFKPDI 360
            +TE+A++ +L+ + + G +P+  +++ ++   C     ++AL     M ++  +  PD+
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  + ++ G   EG   KA   F     +G   D VTYN +I +LCK R ++ A  +L +
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--------- 471
           M      PD  TY+ +       GRL+EA K    M + G I + +V  N+         
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPN-IVTCNSFLASLCKHG 384

Query: 472 ----------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                     S T +   P   SY   ++ + S+G + D + +F   +  GIA N   + 
Sbjct: 385 RSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444

Query: 522 NLMNGLIKR 530
            L++   KR
Sbjct: 445 ILIHAYAKR 453


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 236/463 (50%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M    C+PD ++YNT++ +L    +  E  D++  M K+G    P+  ++N ++ G+ K 
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G + +A  + + M Q   +PDV TYN +++  C A  +++A  + ++M    + PD VTY
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N +I+ +  SG   E+ K+  ++   G+ P+ VT +  +   CK G+   A +I + M  
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTT 365

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD V+Y+ L+      G   +   +   M  KG+  N   +N ++        +DE
Sbjct: 366 KGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDE 425

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++      +G   + V+Y TLI+ + R  +   A++ + +M    I P+T  Y+++I 
Sbjct: 426 AMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIH 485

Query: 299 GLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           G    G   +A + ++E++  G+  P+   F++IIH  C EG+V  A    N ++    +
Sbjct: 486 GFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR 545

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P IVT N L+ G C  G +EKA     + +  G   D VT NTL+S  CK  +++D   L
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM  KK+ P   TY  +   L+ +GR   A+K    M+++G
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 233/449 (51%), Gaps = 1/449 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG  C PD V++NT++   FK+G++++  +L ++M ++G+VP+  TYN +V   CK   +
Sbjct: 224 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAM 283

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  V+  M      PD  TYN +I+G+  +G  +E+ ++ ++M S  L+PD VT+++ 
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSF 343

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++   + GRS +A ++   +   G  P+ V+++I++  Y  EG+      +  +M + G 
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGI 403

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             +C   N LI A+ K G M+EA  +   M  +G++ N +T +T++   C   +L +A  
Sbjct: 404 VSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAME 463

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM-PSTFTYNAMIWGL 300
             +     G   +   Y +LI G+       +A +   EM  + +  P+   ++++I  L
Sbjct: 464 KFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A D+ N ++  G  P   TFN++I G+C  G++EKA    + MV    +PD+
Sbjct: 524 CIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 583

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L+SG C+ G ++  L  FR  + K     +VTYN ++  L +  R   A  +  E
Sbjct: 584 VTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHE 643

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M +     D  TY  +   L  +   +EA
Sbjct: 644 MIDSGTAVDIDTYKILLKGLCRNDLTDEA 672



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 222/457 (48%), Gaps = 1/457 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYN I+      G   E   +   M  +GL+P+  T++  +S  CK G  K+A
Sbjct: 297 GVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDA 356

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   MT    +PD+ +Y++L++G+   G   +   L   M    ++ +    N LI+ 
Sbjct: 357 EEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISA 416

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA  +  E+   G++PN VT++ +I  +C+ G++  A +    M   G  P+
Sbjct: 417 HAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPN 476

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL-KMNTITLNTILHTLCCEKKLDEAYMLL 243
              Y++LI   C  G++ +A   +  M  KGL + N +  ++I+H+LC E ++ +A  + 
Sbjct: 477 TAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVF 536

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N     G     V++ +LI GY    K  +A  + D M    I P   T N ++ G  +S
Sbjct: 537 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK +  + +  E+L   + P   T+N ++ G    G+   A +  ++M++     DI T 
Sbjct: 597 GKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTY 656

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            ILL GLCR  + ++A+  F          D    NT+I++L K RR E+A  L + +  
Sbjct: 657 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIST 716

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             L P+  TY  +   L++ G +EEA    S M ++G
Sbjct: 717 SGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 265/557 (47%), Gaps = 56/557 (10%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-DL 70
           TY  ++D   +  + +     ++ + + GL          +   C      EA+ V+   
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINRFFES 128
           M++   +PD  +YN +I   C     +EA  + + M  E  +  PDVV++NT+I+ FF+ 
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +A  L +E+ + G+ P+  T+N ++   CK   +DKA  ++R M + G  PD VTY
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N +I     +G+ +E+ +M   M  KGL  +T+T ++ + +LC   +  +A  +    + 
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTT 365

Query: 249 RGYYLDEVSYGTLITGY-----FRD-------------------------EKANR----- 273
           +G+  D VSY  L+ GY     F D                           A R     
Sbjct: 366 KGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDE 425

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A+ ++ EM+ + + P+  TY+ +I    + G+   A++  ++++  G+ P+   ++++IH
Sbjct: 426 AMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIH 485

Query: 334 GFCSEGQVEKALQFHNKMVEKSF-KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           GFC  G + KA +F ++M+ K   +P+IV  + ++  LC EG +  A   F   I  G  
Sbjct: 486 GFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR 545

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
              VT+N+LI   C   ++E AFG+L  M    + PD  T   + +   +SG++++    
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG--- 602

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              ++   ++ H+ V+P T           ++Y+  ++     GR   A ++F E    G
Sbjct: 603 ---LILFREMLHKKVKPTT-----------VTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648

Query: 513 IAINKSTYMNLMNGLIK 529
            A++  TY  L+ GL +
Sbjct: 649 TAVDIDTYKILLKGLCR 665



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 217/451 (48%), Gaps = 36/451 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD V+Y+ +L     +G+  ++ +L   M  +G+V N    NIL+S + K G + EA
Sbjct: 367 GHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEA 426

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M      P+V TY+ LI+ +C  G L +A     +M S+ + P+   Y++LI+ 
Sbjct: 427 MLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHG 486

Query: 125 FFESGRSMEAFKLIDELDEHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
           F   G  ++A + I E+   G+ +PN V  + +I   C EG++  A  +   +   G  P
Sbjct: 487 FCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRP 546

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VT+N+LID  C  G ME+AF ++D M   G++ + +T NT++                
Sbjct: 547 TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV---------------- 590

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                              +GY +  K +  L L+ EM  +++ P+T TYN ++ GL ++
Sbjct: 591 -------------------SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+T  A  M +E++ SG   D  T+  ++ G C     ++A+   +K+     K DI   
Sbjct: 632 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITIL 691

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N +++ L +    E+A   F +    G   +  TY  +I +L KE  +E+A  + S ME+
Sbjct: 692 NTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEK 751

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
               P       I   L++ G + +A  + S
Sbjct: 752 SGCAPSSRLLNDIIRMLLQKGDIVKAGYYMS 782



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 1/384 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G  P+ VTY+T++ A  + G+L +  +  S M   G+ PN   Y+ L+ G+C  G 
Sbjct: 433 MQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGD 492

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A   + ++M++    P++  ++ +I+  C  G + +A  +   +  +   P +VT+N
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFN 552

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +LI+ +   G+  +AF ++D +   GI+P+ VT+N ++  YCK GKID    + R M   
Sbjct: 553 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHK 612

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P  VTYN ++D   +AG    A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 613 KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 672

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L +         D     T+I   ++  +   A  L+  +    ++P+  TY  MI  
Sbjct: 673 ITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  E+A  M + + +SG  P     N II     +G + KA  + +K+       +
Sbjct: 733 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLE 792

Query: 360 IVTCNILLSGLCREGILEKALKFF 383
             T ++L+S    +G   + +KF 
Sbjct: 793 ASTTSLLMSLFSSKGKHREQIKFL 816



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 123/262 (46%), Gaps = 21/262 (8%)

Query: 276 KLWDEMKERQIMPSTF-TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           ++  E    ++ P T  TY  ++    ++ + +     +  LL++G+        T +  
Sbjct: 109 RICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKC 168

Query: 335 FCSEGQVEKALQ-FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK-- 391
            C   + ++A+    ++M E S  PD ++ N ++  LC +   ++AL   +    +G   
Sbjct: 169 LCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 228

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           + D V++NT+I    K+  +  A  L +EM +K + PD  TY +I  AL ++  +++A+ 
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF 288

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               MV+ G                 ++P  ++Y+  I+ +   G +K++ ++F +   K
Sbjct: 289 VLRQMVDKG-----------------VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSK 331

Query: 512 GIAINKSTYMNLMNGLIKRRKS 533
           G+  +  T+ + M+ L K  +S
Sbjct: 332 GLIPDTVTFSSFMSSLCKHGRS 353


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 263/558 (47%), Gaps = 53/558 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN IL +L  +G ++    L S ++++G+ P+R TY+ L+SG  K   L  A+ +
Sbjct: 156 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDL 215

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFF 126
           +D M       D   YN L++G    GM E+A ++ +++       P++ TY  +++   
Sbjct: 216 LDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLC 275

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + GR  EA ++   +  +  + + VT+ I+I   C+ G +D A ++  +M + G   D  
Sbjct: 276 KLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVS 335

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT-------------------------- 220
            YN+LI   C+ G   EA++  D  G  G++  T                          
Sbjct: 336 VYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLE 395

Query: 221 ---------ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                    +T  T++H LC     + A+ +L  A   G  LD  SY ++I  + +D + 
Sbjct: 396 NDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRT 455

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A +++  M +    P++  YNA+I G  +  K   AI +  E+  +G  P   T+NT+
Sbjct: 456 HDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTL 515

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G C   + ++A     +M+E+ FKPDI T   L+ GLCR+  ++ AL+ +   +  G 
Sbjct: 516 IDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGL 575

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            VD + +N LI  LC   ++++AF +  EM+EK   P+  TY  +     E G +++A  
Sbjct: 576 QVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAAS 635

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             + +++ G                 + P  ++Y+ +I   CS  R  + + +  E    
Sbjct: 636 LWTAILDNG-----------------LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLAT 678

Query: 512 GIAINKSTYMNLMNGLIK 529
           GI     T+  L+  +IK
Sbjct: 679 GIMPTVITWSILVRAVIK 696



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 235/484 (48%), Gaps = 38/484 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLG 59
           M  +G   D V YN +L   F+ G   +   +   + +  G  PN  TY +++ G CKLG
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
             KEA  V   M  N    D  TY +LI+G C +G ++ A R+  +M    L+ DV  YN
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYN 338

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +LI  F E GR+ EA+K  D     GI+    T+NIM K     G + +A ++++ +E +
Sbjct: 339 SLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLEND 397

Query: 180 G-FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
              SPD VT+ TLI   C+ G    AF +++     G +++  + +++++  C + +  +
Sbjct: 398 ASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHD 457

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +  +  K G   +   Y  LI G+ R  K N A+K++ EM      P+  TYN +I 
Sbjct: 458 ANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLID 517

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTF------------------------------ 328
           GL ++ K ++A  +  E+L+ G  PD  T+                              
Sbjct: 518 GLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV 577

Query: 329 -----NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
                N +IHG CS G+V++A   + +M EK+  P++VT N L+ G    G ++KA   +
Sbjct: 578 DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLW 637

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            + +  G   D VTYNT I  LC   R  +   LL+E+    + P   T++ +  A+++ 
Sbjct: 638 TAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKY 697

Query: 444 GRLE 447
           G ++
Sbjct: 698 GPIQ 701



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 212/459 (46%), Gaps = 33/459 (7%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           ++++ +  A M + A    +++ SL    P V ++NTL++ F  + R  +A      L  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASL-S 146

Query: 144 HG-----IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           HG     I PN  T+NI+++  C  G +D+A  +  ++   G +PD VTY+TL+    K 
Sbjct: 147 HGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKH 206

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR--GYYLDEV 256
             ++ A  ++D M   G++ + +  N +L   C    + E  M +     R  G   +  
Sbjct: 207 DQLDNALDLLDEMPNYGVQADAVCYNALLSG-CFRTGMFEKAMKVWEQLVRDPGASPNLA 265

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  ++ G  +  +   A ++W  M        T TY  +I GL +SG  + A  + +++
Sbjct: 266 TYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDM 325

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           +++G++ D + +N++I GFC  G+  +A +F +       +  I T NI+  GL   G++
Sbjct: 326 VKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMV 384

Query: 377 EKALKFFRSWILKGKAV---DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
            +A +  +   L+  A    D VT+ TLI  LC+      AF +L +        D ++Y
Sbjct: 385 SEATELLKQ--LENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSY 442

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
           +++     + GR  +A +    MV+ G                   P+S  Y+  IN  C
Sbjct: 443 SSMINRFCKDGRTHDANEVYKNMVKDG-----------------CKPNSHVYNALINGFC 485

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              +  DA++I+ E    G      TY  L++GL K  K
Sbjct: 486 RVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 202/461 (43%), Gaps = 24/461 (5%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEME----SLKLLPDVVTYNTLINRFFESGRSME 133
           P V ++N L++ +  A    +A      +       ++ P++ TYN ++      G    
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  L   L   G+ P+ VT++ ++    K  ++D A  ++  M   G   D V YN L+ 
Sbjct: 177 AVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLS 236

Query: 194 ANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              + G  E+A ++ + + R  G   N  T   +L  LC   +  EA  + +      + 
Sbjct: 237 GCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQ 296

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D V+YG LI G  R    + A +++ +M +  ++     YN++I G  + G+T +A   
Sbjct: 297 ADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLC 371
            +    SG I   TT+N +  G    G V +A +   ++  + S  PD VT   L+ GLC
Sbjct: 357 WDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G   +A +        G+ +D  +Y+++I+  CK+ R  DA  +   M +    P+ +
Sbjct: 416 ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSH 475

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
            Y A+        ++ +A K    M   G                   P+ I+Y+  I+ 
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSNGCC-----------------PTIITYNTLIDG 518

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C   +Y++A  + +E  ++G   +  TY +L+ GL + +K
Sbjct: 519 LCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 252/494 (51%), Gaps = 17/494 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C PD   YN +++A   +G+ ++    L  M K G  P+  T++ +++ +C  G 
Sbjct: 304 MPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGN 363

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++ + + +    P+V  YN L++G+  A  + +A  L +EM    + PD  T+N 
Sbjct: 364 VVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNI 423

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+   ++ G+  ++++L  +     + P+   +++ +   C  G++D+A + + +M E G
Sbjct: 424 LVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKG 483

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V +N++I A  +AG  + A +   +M   GL  ++ T +++L  L  + +L EA 
Sbjct: 484 MPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEAR 543

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +G  +++V++  L+ GYF+      A  LW EM+ R I P    ++A I GL
Sbjct: 544 DLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGL 603

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S++G  E+A +  +E+ + G +P+   +N++IHG C+ G++ +AL+   +M +K   PDI
Sbjct: 604 SKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDI 663

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI+++G C+EG ++ A   F      G   D+VTYNTLI   CK   +  A   L++
Sbjct: 664 FTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNK 723

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  TY         S ++  A      ++  G +                 P
Sbjct: 724 MYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVV-----------------P 766

Query: 481 SSISYSEKINEHCS 494
           ++++Y+  +N  C+
Sbjct: 767 NTVTYNTMMNAVCT 780



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 224/445 (50%), Gaps = 1/445 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+   YNT++   FK   + +   L  +M+ +G+ P+  T+NILV+G  K G   ++
Sbjct: 378 GLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADS 437

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +    + +  +PD   Y++ + G C AG L+EA +  ++M    + P VV +N++I  
Sbjct: 438 YELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAA 497

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G    A K    +   G+ P++ T + M+    K+G++ +A  ++  M + G   +
Sbjct: 498 YSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVN 557

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V +  L+D   K G+   A  +   M  +G+  + I  +  +  L     ++EAY   +
Sbjct: 558 KVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFS 617

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             SK+G+  +   Y +LI G     K + ALKL  EM+++ ++P  FT N +I G  + G
Sbjct: 618 EMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEG 677

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A D   E+   G+ PD  T+NT+I G+C    +  A +F NKM    + PDI T N
Sbjct: 678 RMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYN 737

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I + G C    + +A+      I  G   ++VTYNT+++++C +  L+ A  L +++ + 
Sbjct: 738 IRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKM 796

Query: 425 KLGPDRYTYAAIHTALVESGRLEEA 449
              P+  T   + +   + G  E+A
Sbjct: 797 AFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 250/589 (42%), Gaps = 87/589 (14%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D    NT++          E  ++LS M++ G+ P+ +  +IL     ++G      +++
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLL 266

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M ++   P    +N++I  +C  G L  A  L   M      PDV  YN LIN +   
Sbjct: 267 RGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIR 326

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR+ +A   +  + ++G KP+ +T + +I  +C EG + +A KI   ++E G SP+   Y
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI---------------------- 226
           NTL+    KA ++ +A  + + M  KG+  +  T N +                      
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 227 -------------LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
                        +  LC   +LDEA   L    ++G     V++ ++I  Y R    + 
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM------------ 321
           A K +  M    ++PS+ T ++M+ GLS+ G+ ++A D+L +++  G+            
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 322 -----------------------IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
                                   PD   F+  I G    G VE+A +  ++M +K F P
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +    N L+ GLC  G L +ALK  R    KG   D  T N +I+  CKE R++ AF   
Sbjct: 627 NNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAF 686

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +EM    + PD  TY  +     +   +  A +F + M  +G                  
Sbjct: 687 AEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG-----------------W 729

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           DP   +Y+ +I   CS  +   A+ + +E    G+  N  TY  +MN +
Sbjct: 730 DPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAV 778



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 222/525 (42%), Gaps = 55/525 (10%)

Query: 66  RVVDLMTQN--KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            +V+ M  N  K   D    N L+ G+ N+ M  E+  +   M  + + P     + L  
Sbjct: 192 HLVEFMWANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFR 251

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G     +KL+  +   G +P     NIMI  +C++G +  A  ++  M +    P
Sbjct: 252 LLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEP 311

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D   YN LI+A    G   +A   + +M + G K + IT +TI+   C E  + EA  + 
Sbjct: 312 DVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIF 371

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   +   Y TL++GYF+     +A  L++EM+++ I P   T+N ++ G  + 
Sbjct: 372 EGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKY 431

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV-- 361
           GK   + ++  +   S ++PD + ++  + G C  GQ+++A+QF   M+EK   P +V  
Sbjct: 432 GKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAF 491

Query: 362 ---------------------------------TCNILLSGLCREGILEKALKFFRSWIL 388
                                            TC+ +L GL ++G L++A       I 
Sbjct: 492 NSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMID 551

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG  V+ V +  L+    K      A  L  EME + + PD   ++A    L ++G +EE
Sbjct: 552 KGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEE 611

Query: 449 AQKFTSIMVETGKINHQVVQP-------NTSKTPEEID-----------PSSISYSEKIN 490
           A +  S M + G + +  V         N  K  E +            P   + +  IN
Sbjct: 612 AYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIIN 671

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             C +GR K A   F E    G+  +  TY  L+ G  K    +S
Sbjct: 672 GFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVS 716


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 239/492 (48%), Gaps = 5/492 (1%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            G  C P+ VTY T++D L K    +    +   M   G+ PN  TYN L+ GY  +G  
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           KE +++++ M+     PD +TY  L+N  C    L E       M    L PD   +N  
Sbjct: 259 KEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIF 315

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
            + + + G   +A  + +++ +HG+ PN V +  +I   CK G++D A      M   G 
Sbjct: 316 FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGV 375

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P+ V +N+L+   C     E A  ++  M  +G+  N +  NT++  LC   ++ E   
Sbjct: 376 TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR 435

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L++     G   D  SY  LI+GY    + + A K++D M    + P+  TYN ++ G  
Sbjct: 436 LIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 495

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            + + + A  +  E+L+ G+ P   T+NTI+HG     +  +A + +  M+    K DI 
Sbjct: 496 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 555

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T NI+L+GLC+   +++A K F+S   KG  ++ +T+  +I +L K  R EDA  L + +
Sbjct: 556 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 615

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI-NHQVVQPNTSKTPEEIDP 480
               L P+  TY  +   L+E G LEE     S M + G   N Q++     +     D 
Sbjct: 616 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 675

Query: 481 SSI-SYSEKINE 491
           S   +Y  K++E
Sbjct: 676 SRAGAYLSKLDE 687



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 260/543 (47%), Gaps = 30/543 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK---QGLVPNRTTYNILVSGYCK 57
           M   GC PD V+Y+ +L     + +  E  +LL  M     +   PN  TY  ++ G CK
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCK 219

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
                 A  V   M  N   P+  TYN LI+G+ + G  +E  ++ ++M +  L PD  T
Sbjct: 220 AQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYT 279

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y +L+N +  +   M +F  +D + E+G+ P+    NI    Y K G IDKA  I   M 
Sbjct: 280 YGSLLN-YLCALSEMHSF--LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR 336

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           ++G SP+ V Y  LIDA CK G +++A    + M  +G+  N +  N++++ LC   K +
Sbjct: 337 QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWE 396

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  L+     +G   + V + TLI       +     +L D M+   + P  F+Y  +I
Sbjct: 397 RAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLI 456

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G   +G+T++A  + + ++  G+ P E T+NT++HG+CS  +++ A     +M+ K   
Sbjct: 457 SGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT 516

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P +VT N +L GL +     +A + + + I  G   D  TYN +++ LCK   +++AF +
Sbjct: 517 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKM 576

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
              +  K L  +  T+  +  AL++ GR E+A    + +   G +               
Sbjct: 577 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV--------------- 621

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR---RKSI 534
             P+ ++Y         +G  ++   +F    + G A N      ++N L++R   R  I
Sbjct: 622 --PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ----MLNALVRRLLHRGDI 675

Query: 535 SKA 537
           S+A
Sbjct: 676 SRA 678



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 193/399 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+  +N    A  K G +++  D+ + M++ GL PN   Y  L+   CKLG + +A
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 363

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + M      P++  +N L+ G C     E A  L  EM    + P+ V +NTLI  
Sbjct: 364 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 423

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR ME  +LID ++  G++P+A ++  +I  YC  G+ D+A K+   M   G SP 
Sbjct: 424 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPT 483

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTL+   C A  +++A+ +   M RKG+    +T NTILH L   K+  EA  L  
Sbjct: 484 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL 543

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +    G   D  +Y  ++ G  +    + A K++  +  + +  +  T+  MI  L + G
Sbjct: 544 NMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 603

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A+D+   +  +G++P+  T+  +      EG +E+     + M +    P+    N
Sbjct: 604 RKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 663

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
            L+  L   G + +A  +      +  +V++ T + LIS
Sbjct: 664 ALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLIS 702



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 207/432 (47%), Gaps = 3/432 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY ++L+ L     L+E+   L  M + GL P+   +NI  S Y K G 
Sbjct: 268 MSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 324

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM + + M Q+   P+V  Y  LI+  C  G +++A     +M +  + P++V +N+
Sbjct: 325 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 384

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+       +   A +L+ E+ + GI PNAV  N +I   C  G++ +  +++  ME  G
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 444

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  +Y  LI   C AG  +EA ++ D M   GL    +T NT+LH  C   ++D+AY
Sbjct: 445 VRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 504

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++G     V+Y T++ G F+ ++ + A +L+  M         +TYN ++ GL
Sbjct: 505 CLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 564

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S   ++A  M   L   G+  +  TF  +I      G+ E A+     +      P++
Sbjct: 565 CKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNV 624

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  ++   L  EG LE+    F +    G A +S   N L+  L     +  A   LS+
Sbjct: 625 VTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 684

Query: 421 MEEKKLGPDRYT 432
           ++E+    +  T
Sbjct: 685 LDERNFSVEAST 696



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 212/464 (45%), Gaps = 59/464 (12%)

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFK------------------------------- 136
           S+K+ P+  TY+ LI      GR   +F                                
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 137 -----LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFS--PDCVTY 188
                L+  + E G  P+ V+++I++K +C E + ++A +++R M  ++G S  P+ VTY
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            T+ID  CKA   + A  +   M   G+K N  T N ++H      K  E   +L   S 
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG   D  +YG+L+       + +  L   D M E  + P    +N      ++ G  ++
Sbjct: 271 RGLKPDCYTYGSLLNYLCALSEMHSFL---DLMVENGLSPDHHIFNIFFSAYAKCGMIDK 327

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+D+ N++ Q G+ P+   +  +I   C  G+V+ A    N+M+ +   P+IV  N L+ 
Sbjct: 328 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 387

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC     E+A +     + +G   ++V +NTLI +LC   R+ +   L+  ME   + P
Sbjct: 388 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 447

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D ++Y  + +    +GR +EA+K    MV  G                 + P+ ++Y+  
Sbjct: 448 DAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG-----------------LSPTEVTYNTL 490

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++ +CS  R  DA  +F E  +KG+     TY  +++GL + ++
Sbjct: 491 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 179/368 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V Y  ++DAL K G++++     + M  +G+ PN   +N LV G C +  
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A  +V  M      P+   +N LI   CN G + E  RL   ME + + PD  +Y  
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +  +GR+ EA K+ D +   G+ P  VT+N ++  YC   +ID A  + R M   G
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTYNT++    +     EA  +   M   G K +  T N IL+ LC    +DEA+
Sbjct: 515 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 574

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S   +G  L+ +++  +I    +  +   A+ L+  +    ++P+  TY  +   L
Sbjct: 575 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 634

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+   + + + ++G  P+    N ++      G + +A  + +K+ E++F  + 
Sbjct: 635 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 694

Query: 361 VTCNILLS 368
            T ++L+S
Sbjct: 695 STTSLLIS 702



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 123/277 (44%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  +Y  ++      G+ +E   +   M   GL P   TYN L+ GYC    
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  +   M +    P V TYN +++G        EA  L   M +     D+ TYN 
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   +S    EAFK+   L   G++ N +T  IMI    K G+ + A  +   +  NG
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  + +   + G++EE   +   M + G   N+  LN ++  L     +  A 
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 679

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
             L+   +R + ++  +   LI+ +  DE  + A  L
Sbjct: 680 AYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 31/250 (12%)

Query: 296 MIWGLSQSGKT--EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK---------- 343
           +I   ++SG    + A+ + +ELL          FN I++      +             
Sbjct: 18  IIAARARSGSLGLDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESE 77

Query: 344 -ALQFHNKMV-EKSFK--PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
             +   N+MV E S K  P+  T +IL+  LCR G L+ +   F   +  G  V+ +  N
Sbjct: 78  LVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVIN 137

Query: 400 TLISSLCKERRLEDAFG-LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            L+  LC  +R+ +A   LL  M E    PD  +Y+ +        R EEA +   +M  
Sbjct: 138 QLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAN 197

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
               +H    P          P+ ++Y+  I+  C    +  A  +F++    G+  N  
Sbjct: 198 ----DHGRSCP----------PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNND 243

Query: 519 TYMNLMNGLI 528
           TY  L++G +
Sbjct: 244 TYNCLIHGYL 253


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 274/567 (48%), Gaps = 46/567 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +     K+ +++ V  L  DM    + P   T+N+L+S  C++G+L+ A  V
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M++    P+ ++  +L+ G+C AG+      L  EM S   LP+ V YNT+I+    
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---EENGFS-P 183
            G+++EA KL++++ E G+ P+ VT N  I   CK G+I +A +I R+M   EE G   P
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN +++  C  G  EEA  + D M +    ++  + N  +  L    KL EA+++L
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLIL 354

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N  +++    +  SY  L+ G  +    + A  +   M+E  + P T TY+ ++ G  + 
Sbjct: 355 NEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A  +L E++Q G  P+  T N ++H    EG+  +A      M E+ +  D VTC
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTC 474

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
           N +++GLC+ G L+KA++       +G A                        DS+TY T
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYAT 534

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +I  LCK  R+++A   L EM  KKL PD   +        + G+L  A +    M + G
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594

Query: 461 -----KINHQVVQPNTSKTP-------------EEIDPSSISYSEKINEHCSQGRYKDAL 502
                +  + ++Q   S+                 I P+  +Y+  I+     G+ KDA 
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIK 529
            + +E  QKGI+ N  T+  L+    K
Sbjct: 655 CLLDEMLQKGISPNIYTFRILIGAFFK 681



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 280/574 (48%), Gaps = 45/574 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LP+ V YNT++ +L  +G+  E   L+  M++ GL P+  T+N  ++  CK G 
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273

Query: 61  LKEAMRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + EA R+   M  ++ +    P+  TYN+++ G+C+ GM EEA  +   M++ + L  + 
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL-SLR 332

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           +YN  +     SG+ +EA  +++E+ E  IKPN  ++NI++   CK G    A  I+  M
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
            E+G +PD VTY+TL+   C+ G + EA  ++  M + G   N  T N +LH+L  E + 
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER------------ 284
            EA  LL   ++RGY LD V+  T+I G  +    ++A+++   M  R            
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 285 -----------QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
                      + +P + TY  +I GL + G+ ++A   L E++   + PD   F+T I+
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIY 572

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            +C +G++  A +   +M +K     + T N L+ GL  E  + +          +G   
Sbjct: 573 NYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFP 632

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +  TYN +IS L +  +L+DA  LL EM +K + P+ YT+  +  A  ++     AQ+  
Sbjct: 633 NVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692

Query: 454 SIMVE---------TGKINHQVVQPNTSKTPEEIDPS--------SISYSEKINEHCSQG 496
            I +          +   N  +    T K  E  + +        +  Y + I + C  G
Sbjct: 693 EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDG 752

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +  DA  I  +   K  + + +++M +++ L KR
Sbjct: 753 KLDDASFILHKMMDKQYSFDPASFMPVIDELGKR 786



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 242/474 (51%), Gaps = 32/474 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  +  L + GKL E   +L++M ++ + PN  +YNILV G CK G   +A  ++ LM
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            ++   PD  TY+ L++G+C  G + EA  + +EM  +   P++ T N L++  ++ GR+
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--------- 182
            EA  L+  ++E G   + VT N MI   CK G +DKA +IV  M   G +         
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 183 --------------PDCVTYNTLIDANCKAGNMEEA-FRMMDVMGRKGLKMNTITLNTIL 227
                         PD +TY T+I   CK G ++EA  ++++++G+K L  +++  +T +
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKK-LSPDSLIFDTFI 571

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           +  C + KL  A+ +L    K+G      +Y +LI G   + +      L DEMKER I 
Sbjct: 572 YNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIF 631

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF---CSEGQVEKA 344
           P+ +TYN +I  LS+ GK + A  +L+E+LQ G+ P+  TF  +I  F   C  G  ++ 
Sbjct: 632 PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQEL 691

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +    +            N LL+G    G   KA + F + + +  A+ +  Y  LI  
Sbjct: 692 FEIALSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEK 747

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           LCK+ +L+DA  +L +M +K+   D  ++  +   L + G    A +F   M+E
Sbjct: 748 LCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 189/404 (46%), Gaps = 30/404 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+T+L    ++GK+ E   +L +M + G  PN  T NIL+    K G   EA
Sbjct: 396 GVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEA 455

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-----ESL---------- 109
             ++ +M +     D  T N +ING C AG L++A  +   M      SL          
Sbjct: 456 EDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDL 515

Query: 110 --------KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
                   K LPD +TY T+I    + GR  EA K + E+    + P+++  +  I  YC
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K+GK+  A ++++ ME+ G +    TYN+LI        + E + +MD M  +G+  N  
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD-- 279
           T N I+  L    KL +A  LL+   ++G   +  ++  LI  +F+      A +L++  
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIA 695

Query: 280 -EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
             +   +    +F +N ++ G    G+T +A ++    L   +      +  +I   C +
Sbjct: 696 LSLCGHKESLYSFMFNELLAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKD 751

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           G+++ A    +KM++K +  D  +   ++  L + G    A +F
Sbjct: 752 GKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEF 795



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 14/297 (4%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  CLPD++TY TI+  L K G+++E +  L +M  + L P+   ++  +  YCK G L 
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A RV+  M +      + TYN LI G  +   + E + L  EM+   + P+V TYN +I
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY---CKEGKIDKACKIVRNMEEN 179
           +   E G+  +A  L+DE+ + GI PN  T  I+I  +   C  G   +  +I  ++  +
Sbjct: 642 SCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGH 701

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             S     +N L+      G   +A  + +    + L +       ++  LC + KLD+A
Sbjct: 702 KESLYSFMFNELL----AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDA 757

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK-LWDEMKERQI-MPSTFTYN 294
             +L+    + Y  D  S+  +I     DE   R  K   DE  ER + M S   +N
Sbjct: 758 SFILHKMMDKQYSFDPASFMPVI-----DELGKRGSKHAADEFAERMMEMASETDFN 809



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 14/245 (5%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P    YN +     +  + +  I +  ++  + + P   TFN +I   C  G +E A + 
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            +KM EK  KP+  +  IL+ G CR G+    +         G   + V YNT+ISSLC 
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           E +  +A  L+ +M E  L PD  T+     AL +SG++ EA +    M    +I+ ++ 
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDM----QIDEEMG 291

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            P          P++++Y+  +   CS+G +++A  IF+  +     ++  +Y   M GL
Sbjct: 292 LPK---------PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE-TLSLRSYNIWMLGL 341

Query: 528 IKRRK 532
           ++  K
Sbjct: 342 VRSGK 346


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 225/430 (52%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G  PD ++Y+T+++   + G+L++V  L+  MK++GL PN  TY  ++   C++  
Sbjct: 695  MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICK 754

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA      M     LPD   Y  L++G+C  G +  A +   EM S  + PDV+TY  
Sbjct: 755  LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +I+ F + G  +EA KL  E+   G++P+ +T   ++  YCK G I  A ++  +M + G
Sbjct: 815  IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             SP+ VTY TLID  CK G+++ A  ++  M + GL+ N  T N+I++ LC    ++EA 
Sbjct: 875  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+      G   D V+Y TL+  Y +  + ++A ++  EM  + + P+  T+N ++ G 
Sbjct: 935  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               G  E    +LN +L  G+ P+ TTFN ++  +C    ++ A   +  M  +  +PD 
Sbjct: 995  CLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054

Query: 361  VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             T   L+ G C    +++A   F+    KG +V   TY+ LI    K ++  +A  +  +
Sbjct: 1055 KTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114

Query: 421  MEEKKLGPDR 430
            M    L  D+
Sbjct: 1115 MRRDGLAADK 1124



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 246/489 (50%), Gaps = 17/489 (3%)

Query: 32   LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
            +  +  + G+  N  +YNI++   C+LG + EA  ++ LM      PDV +Y+ +ING+C
Sbjct: 656  VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715

Query: 92   NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
              G L++ ++L ++M+   L P+  TY ++I       +  EA +   E+   GI P+ +
Sbjct: 716  RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775

Query: 152  THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             +  ++  +CK G I  A K    M     +PD +TY  +I   C+ G+M EA ++   M
Sbjct: 776  VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 212  GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              +GL+ + IT   +++  C    + +A+ + N   + G   + V+Y TLI G  ++   
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 272  NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            + A +L  EM +  + P+ FTYN+++ GL +SG  E+A+ ++ E   +G+  D  T+ T+
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 332  IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
            +  +C  G+++KA +   +M+ K  +P IVT N+L++G C  G+LE   K     + KG 
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 392  AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            A ++ T+N L+   C    L+ A  +  +M  + + PD  TY  +      +  ++EA  
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075

Query: 452  FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
                M   G                    S  +YS  I     + ++ +A +IF++ R+ 
Sbjct: 1076 LFQEMKGKG-----------------FSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRD 1118

Query: 512  GIAINKSTY 520
            G+A +K  +
Sbjct: 1119 GLAADKEIF 1127



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 225/449 (50%)

Query: 12   TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            +YN ++  + + G++NE   LL  M+ +G  P+  +Y+ +++GYC+ G L +  ++++ M
Sbjct: 671  SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730

Query: 72   TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             Q    P+ +TY  +I   C    L EA     EM    +LPD + Y TL++ F + G  
Sbjct: 731  KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790

Query: 132  MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
              A K   E+    I P+ +T+  +I  +C+ G + +A K+   M   G  PD +T+  L
Sbjct: 791  RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850

Query: 192  IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
            ++  CKAG++++AFR+ + M + G   N +T  T++  LC E  LD A  LL+   K G 
Sbjct: 851  MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910

Query: 252  YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
              +  +Y +++ G  +      A+KL  E +   +   T TY  ++    +SG+ ++A +
Sbjct: 911  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970

Query: 312  MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
            +L E+L  G+ P   TFN +++GFC  G +E   +  N M+ K   P+  T N L+   C
Sbjct: 971  ILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYC 1030

Query: 372  REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
                L+ A   ++    +G   D  TY  L+   C  R +++A+ L  EM+ K       
Sbjct: 1031 IRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVS 1090

Query: 432  TYAAIHTALVESGRLEEAQKFTSIMVETG 460
            TY+ +     +  +  EA++    M   G
Sbjct: 1091 TYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 234/453 (51%), Gaps = 22/453 (4%)

Query: 79   DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF-ESGRSMEAFKL 137
            D   +++        GML EA ++ ++M +  L+  V + N  + R   +  ++  A  +
Sbjct: 597  DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 138  IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
              E  E G+  N  ++NI+I + C+ G+I++A  ++  ME  G++PD ++Y+T+I+  C+
Sbjct: 657  FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716

Query: 198  AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
             G +++ +++++ M +KGLK N+ T  +I+  LC   KL EA    +    +G   D + 
Sbjct: 717  FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776

Query: 258  YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
            Y TL+ G+ +      A K + EM  R I P   TY A+I G  Q G   +A  + +E+L
Sbjct: 777  YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836

Query: 318  QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
              G+ PD  TF  +++G+C  G ++ A + HN M++    P++VT   L+ GLC+EG L+
Sbjct: 837  CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896

Query: 378  KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             A +        G   +  TYN++++ LCK   +E+A  L+ E E   L  D  TY  + 
Sbjct: 897  SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956

Query: 438  TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             A  +SG +++AQ+  + M+  G                 + P+ ++++  +N  C  G 
Sbjct: 957  DAYCKSGEMDKAQEILTEMLGKG-----------------LQPTIVTFNVLMNGFCLHGM 999

Query: 498  YKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             +D  ++      KGIA N +T+    N L+K+
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTF----NCLVKQ 1028



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 147/283 (51%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC P+ VTY T++D L K+G L+   +LL +M K GL PN  TYN +V+G CK G ++EA
Sbjct: 874  GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 933

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++V          D  TY  L++ +C +G +++A  +  EM    L P +VT+N L+N 
Sbjct: 934  VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F   G   +  KL++ +   GI PNA T N ++K YC    +  A  I ++M   G  PD
Sbjct: 994  FCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              TY  L+  +C A NM+EA+ +   M  KG  ++  T + ++      KK  EA  + +
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFD 1113

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
               + G   D+  +       ++ ++ +  +   DE+ E  ++
Sbjct: 1114 QMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1156


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 239/488 (48%), Gaps = 35/488 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY T++D L K   ++  + +   M  +G+ PN  TY  L+ GY  +G  KE +++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M+ +   PD + Y +L++  C  G   EA  +   +    + P+V  Y  L++ +  
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   E    +D +  +G+ P+    NIM   Y K+  ID+A  I   M +   SP+ VT
Sbjct: 320 EGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT 379

Query: 188 YNTLIDANCKAGNMEEAF----RMMD-------------VMG------------------ 212
           Y  LIDA CK G +++A     +M+D             V G                  
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL 439

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G++++T+  NT++  LC E ++ EA  L++   + G   D +SY TL+ G+    + +
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRID 499

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A KL D +    + P   TYN ++ G  ++ + + A  +  E+L  G+ PD  T+NTI+
Sbjct: 500 EAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG    G+  +A + +  M+    + +I T NI+++GLC+   +++A K F S   K   
Sbjct: 560 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQ 619

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +D  T N +I +L K  R EDA  L + +    L PD  TY  I   L++ G LEE  + 
Sbjct: 620 LDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDEL 679

Query: 453 TSIMVETG 460
            S M E G
Sbjct: 680 FSAMEENG 687



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 230/454 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD   Y  +LD L K G+  E R++   + ++G+ PN T Y IL+ GY   G 
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS 322

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E    +DLM  N   PD   +N++   +    M++EA  +  +M   +L P++VTY  
Sbjct: 323 LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGA 382

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++ + G+ P+    + ++   C   K +KA ++   + + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V +NTL+   C+ G + EA R++D+M R G++ + I+ NT++   C   ++DEA 
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   D+V+Y TL+ GY +  + + A  L+ EM  + + P   TYN ++ GL
Sbjct: 503 KLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 562

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G+  +A ++   ++ S    +  T+N II+G C    V++A +  + +  K  + DI
Sbjct: 563 FQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDI 622

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  E A+  F +    G   D  TY  +  +L KE  LE+   L S 
Sbjct: 623 FTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSA 682

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           MEE    P+     A+   L+  G +  A  + S
Sbjct: 683 MEENGTAPNSRMLNALVRWLLHRGDINRAGAYLS 716



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 249/532 (46%), Gaps = 20/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG---LVPNRTTYNILVSGYCK 57
           M  FGC PD  +Y+ +L     + +  E  +LLS M   G     PN  TY  ++ G CK
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              +  A  V   M      P+  TY  LI+G+ + G  +E  ++ +EM +  L PD   
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  L++   ++GR  EA  + D +   GIKPN   + I++  Y  EG + +    +  M 
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
            NG SPD   +N +  A  K   ++EA  + D M ++ L  N +T   ++  LC   ++D
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVD 394

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A +  N     G   D   + +L+ G    +K  +A +L+ E+ ++ I   T  +N ++
Sbjct: 395 DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLM 454

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
             L + G+  +A  +++ +L+ G+ PD  ++NT++ G C  G++++A +  + +V    K
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLK 514

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD VT N LL G C+   ++ A   FR  ++KG   D VTYNT++  L +  R  +A  L
Sbjct: 515 PDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 574

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
              M   +   + YTY  I   L ++  ++EA K                    S   ++
Sbjct: 575 YLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFH-----------------SLCSKD 617

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +     + +  I      GR +DA+ +F      G+  +  TY  +   LIK
Sbjct: 618 LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIK 669



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 206/407 (50%), Gaps = 8/407 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD+  +N +  A  KK  ++E   +   M++Q L PN  TY  L+   CKLG 
Sbjct: 333 MVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGR 392

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   + M      PD++ ++ L+ G C     E+A  L  E+    +  D V +NT
Sbjct: 393 VDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNT 452

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      GR MEA +LID +   G++P+ +++N ++  +C  G+ID+A K++  +   G
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG 512

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA- 239
             PD VTYNTL+   CKA  +++A+ +   M  KGL  + +T NTILH L    +  EA 
Sbjct: 513 LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 572

Query: 240 --YM-LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
             Y+ ++NS ++   Y    +Y  +I G  ++   + A K++  +  + +    FT N M
Sbjct: 573 ELYLSMINSRTQMNIY----TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I  L + G+ E A+D+   +   G++PD  T+  I      EG +E+  +  + M E   
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGT 688

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
            P+    N L+  L   G + +A  +      K  ++++ T + LIS
Sbjct: 689 APNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLIS 735



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 222/497 (44%), Gaps = 57/497 (11%)

Query: 41  LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK-SLPDVWTYNMLINGWCNAGMLEEA 99
           + P+  TY IL+  +C++G LK       L+ +    + D   ++ L+ G C+A  ++EA
Sbjct: 88  VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147

Query: 100 FR-LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG---IKPNAVTHNI 155
              L + M      PDV +Y+ L+  F    R+ EA +L+  + + G     PN VT+  
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   CK   +D+A  + ++M + G  P+  TY  LI      G  +E  +M+  M   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           L+ +      +L  LC   +  EA  + +S  ++G   +   YG L+ GY  +   +   
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
              D M    + P    +N M    ++    ++A+ + +++ Q  + P+  T+  +I   
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G+V+ A+   N+M+++   PDI   + L+ GLC     EKA + F   + +G  +D+
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           V +NTL+ +LC+E                                   GR+ EAQ+   +
Sbjct: 448 VFFNTLMCNLCRE-----------------------------------GRVMEAQRLIDL 472

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M+  G                 + P  ISY+  ++ HC  GR  +A ++ +     G+  
Sbjct: 473 MLRVG-----------------VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKP 515

Query: 516 NKSTYMNLMNGLIKRRK 532
           +K TY  L++G  K R+
Sbjct: 516 DKVTYNTLLHGYCKARR 532



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 128/273 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD ++YNT++D     G+++E   LL  +   GL P++ TYN L+ GYCK   + +A
Sbjct: 477 GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDA 536

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M      PDV TYN +++G    G   EA  L   M + +   ++ TYN +IN 
Sbjct: 537 YSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIING 596

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    EAFK+   L    ++ +  T NIMI    K G+ + A  +   +   G  PD
Sbjct: 597 LCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPD 656

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  + +   K G++EE   +   M   G   N+  LN ++  L     ++ A   L+
Sbjct: 657 VETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLS 716

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
              ++ + L+  +   LI+ Y R E    A  L
Sbjct: 717 KLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 170/635 (26%), Positives = 279/635 (43%), Gaps = 113/635 (17%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-------- 58
           LP+ VTYNTIL+   KKG+      +L DM+K G+  +  TYNI++   CKL        
Sbjct: 261 LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320

Query: 59  ---------------------------GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
                                      G +  A+ + + M +    P V TY  LI+G+C
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380

Query: 92  NAGMLEEAFRLRKEM--------------ESLKLL------PDVVTYNTLINRFFESGRS 131
             G  +EA R+  EM              + LK +      PDV+TY+ LIN     G  
Sbjct: 381 RNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINE----GMI 436

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +    +    I  +  + N +I  YC+ G + +A  +  NM  +G+ PD  TY +L
Sbjct: 437 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 496

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +   C+ G++ +A   M  +  K   ++  TLNT+L  +C    LDEA  L      R  
Sbjct: 497 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 556

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  +Y  L+ G+ +  K   AL L   M E+ ++P T  Y  ++ GL   G+ + A  
Sbjct: 557 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 616

Query: 312 MLNEL--------------------LQSGMI----------------PDETTFNTIIHGF 335
           M  E+                    L+ G I                P   ++N ++HG+
Sbjct: 617 MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 676

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
             +GQ+ + L  +  MV++  KPD VT  +L+ GLC  G++E A+KF    +L+G   D+
Sbjct: 677 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 736

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           + ++ LI +  ++ ++ +A  L S M+   + P   TY A+   L+    L+++ +    
Sbjct: 737 LAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHD 796

Query: 456 MVETG---KINHQVVQPNTSKTPEEID---------------PSSISYSEKINEHCSQGR 497
           MVE+G   K  H +   N      +ID               PS ++ S  +   C  G+
Sbjct: 797 MVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 856

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            ++A+ +F    + G+    +T+  LM+GL K  K
Sbjct: 857 VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFK 891



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 269/574 (46%), Gaps = 70/574 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N +L++L  +GKL++   +L  MK   L PN  TYN +++ Y K G  K A+R++
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M +N    D++TYN++I+  C       A+ L K M  + L PD  +YNTLI+ FF  
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID--------------------K 168
           G+   A  + +++    +KP+  T+  +I  YC+ G+ D                    K
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 169 ACKIVRNMEENGFSPDCVTY-------------------------------NTLIDANCK 197
           A +I++ M  +G  PD +TY                               N +ID+ C+
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 467

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            GN+ EAF + D M R G   +  T  ++L  LC    L +A   +    ++   +DE +
Sbjct: 468 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 527

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
             TL+ G  +    + AL L ++M  R I+P T+TY  ++ G  + GK   A+ +L  +L
Sbjct: 528 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML 587

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKA-LQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           + G++PD   +  +++G  +EGQV+ A   F   + ++    D +  N +++G  + G +
Sbjct: 588 EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 647

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +  +  R+         S +YN L+    K+ +L     L  +M ++ + PD  TY  +
Sbjct: 648 NEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 707

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L E G +E A KF   MV  G                 + P ++++   I     + 
Sbjct: 708 IFGLCEYGLIEIAVKFLEKMVLEG-----------------VFPDNLAFDILIKAFSEKS 750

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +  +ALQ+F   +   ++ +  TY+ ++NGLI++
Sbjct: 751 KMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRK 784



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 234/484 (48%), Gaps = 36/484 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TY ++L  L + G L + ++ +  + ++    +  T N L+ G CK G L EA
Sbjct: 485 GWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEA 544

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M     LPD +TY +L++G+C  G +  A  L + M    L+PD + Y  L+N 
Sbjct: 545 LDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNG 604

Query: 125 FFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               G+   A  +  E+  + G+  + + +N M+  Y K G+I++  +++RNM EN   P
Sbjct: 605 LVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYP 664

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
              +YN L+    K G +     +   M ++G+K + +T   ++  LC    ++ A   L
Sbjct: 665 SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 724

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G + D +++  LI  +    K + AL+L+  MK   + PS+ TY AM+ GL + 
Sbjct: 725 EKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRK 784

Query: 304 GKTEQAIDMLNELLQSGM-----------------------------------IPDETTF 328
              +Q+ ++L+++++SG+                                   +P E   
Sbjct: 785 NWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAE 844

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           ++I+ G C  G+VE+A+   + ++     P I T   L+ GLC+E  ++ A    +    
Sbjct: 845 SSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMES 904

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G  VD VTYN LI+ LC ++ + DA  L  EM+ K L P+  TY  +  A+  +G +++
Sbjct: 905 CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 964

Query: 449 AQKF 452
            +K 
Sbjct: 965 GEKL 968



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 155/629 (24%), Positives = 272/629 (43%), Gaps = 113/629 (17%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  +YNT++   F +GK+N    + + M +Q L P+  TY  L+ GYC+ G   EA RV
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391

Query: 68  V--------------------DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           +                      M  +   PDV TY+ LIN     GM+ EA + ++ M 
Sbjct: 392 LYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMS 447

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH-------------- 153
            +K+  DV ++N +I+ + + G  +EAF + D +  HG  P+  T+              
Sbjct: 448 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 507

Query: 154 ---------------------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
                                N ++   CK G +D+A  +   M      PD  TY  L+
Sbjct: 508 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 567

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-YMLLNSASKRGY 251
           D  CK G +  A  ++ +M  KGL  +TI    +L+ L  E ++  A YM      K G 
Sbjct: 568 DGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGL 627

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           Y D ++Y +++ GY +  + N   +L   M E ++ PS+ +YN ++ G  + G+  + + 
Sbjct: 628 YADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 687

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  ++++ G+ PD  T+  +I G C  G +E A++F  KMV +   PD +  +IL+    
Sbjct: 688 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFS 747

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
            +  +  AL+ F        +  S TY  +++ L ++  L+ ++ +L +M E  L P   
Sbjct: 748 EKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHT 807

Query: 432 TYAAIHTA-----------------------------------LVESGRLEEAQKFTSIM 456
            Y A+  A                                   L + G++EEA    S +
Sbjct: 808 HYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 867

Query: 457 VETGKIN---------HQVVQP-------NTSKTPEE--IDPSSISYSEKINEHCSQGRY 498
           +  G +          H + +        +  +  E   +    ++Y+  I   C++   
Sbjct: 868 MRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCI 927

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGL 527
            DAL ++EE + KG+  N +TY+ L   +
Sbjct: 928 CDALDLYEEMKSKGLLPNITTYITLTGAM 956



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 228/460 (49%), Gaps = 36/460 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C  D  T NT+L  + K G L+E  DL   M  + ++P+  TY IL+ G+CK G +  A
Sbjct: 520 ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPA 579

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLIN 123
           + ++ +M +   +PD   Y  L+NG  N G ++ A  + +E+   + L  D + YN+++N
Sbjct: 580 LILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMN 639

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + G+  E  +L+  + E+ + P++ ++NI++  Y K+G++ +   + R+M + G  P
Sbjct: 640 GYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKP 699

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK-------- 235
           D VTY  LI   C+ G +E A + ++ M  +G+  + +  + ++     + K        
Sbjct: 700 DNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLF 759

Query: 236 ---------------------------LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
                                      L ++Y +L+   + G       Y  LI    R 
Sbjct: 760 SYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRV 819

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              + A +L ++MK   ++PS    ++++ GL + GK E+AI + + ++++GM+P   TF
Sbjct: 820 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 879

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            T++HG C E +++ A      M     K D+VT N+L++GLC +  +  AL  +     
Sbjct: 880 TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKS 939

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           KG   +  TY TL  ++     ++D   LL ++E++ + P
Sbjct: 940 KGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 233/503 (46%), Gaps = 70/503 (13%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           ++++ ++L+N +   G + +A      M+       + + N ++N      +S   +  +
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            E  +     +  T NI++   C +GK+ KA  +++ M +N   P+ VTYNT+++   K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKK 277

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G  + A R++D M + G++ +  T N ++  LC  K+   AY+LL    +     DE SY
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TLI G+F + K N A+ ++++M  + + PS  TY A+I G  ++G+T++A  +L E+  
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 319 SGMIP---------------------------------------------------DETT 327
           +G+ P                                                   D  +
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVAS 457

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           FN II  +C  G V +A   ++ MV   + PDI T   LL GLC+ G L +A +F    +
Sbjct: 458 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 517

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            K  A+D  T NTL+  +CK   L++A  L  +M  + + PD YTY  +     + G++ 
Sbjct: 518 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 577

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            A     +M+E G +                 P +I+Y+  +N   ++G+ K A  +F+E
Sbjct: 578 PALILLQMMLEKGLV-----------------PDTIAYTCLLNGLVNEGQVKAASYMFQE 620

Query: 508 TRQK-GIAINKSTYMNLMNGLIK 529
              K G+  +   Y ++MNG +K
Sbjct: 621 IICKEGLYADCIAYNSMMNGYLK 643



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 6/312 (1%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PDNVTY  ++  L + G +      L  M  +G+ P+   ++IL+  + +   +  A
Sbjct: 696  GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNA 755

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++   M      P   TY  ++NG      L++++ +  +M    L P    Y  LIN 
Sbjct: 756  LQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINA 815

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                G    AF+L +++   G+ P+ V  + +++  CK GK+++A  +  ++   G  P 
Sbjct: 816  KCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPT 875

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              T+ TL+   CK   +++AF +  +M   GLK++ +T N ++  LC +K + +A  L  
Sbjct: 876  IATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYE 935

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                +G   +  +Y TL    +         KL  ++++R I+PS     ++ W      
Sbjct: 936  EMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEW------ 989

Query: 305  KTEQAIDMLNEL 316
            + E AI  LN +
Sbjct: 990  RMENAIKRLNTI 1001



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 1/159 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P  V  ++I+  L K GK+ E   + S + + G+VP   T+  L+ G CK   
Sbjct: 832 MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFK 891

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  +  LM       DV TYN+LI G CN   + +A  L +EM+S  LLP++ TY T
Sbjct: 892 IDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYIT 951

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           L    + +G   +  KL+ ++++ GI P +  H   ++W
Sbjct: 952 LTGAMYATGTMQDGEKLLKDIEDRGIVP-SYKHPESLEW 989



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/352 (20%), Positives = 146/352 (41%), Gaps = 42/352 (11%)

Query: 188 YNTLIDANCKAGNMEEA-----FRMMD-VMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           + TL     K+G +++A      RM+D ++ + GL   T      +H L   +   +A  
Sbjct: 70  WETLSQMAYKSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMS 129

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L   +  G+    + + +L+    R +  N                  F+ + ++    
Sbjct: 130 VLRHLALTGFSCSAI-FSSLLRTISRCDPTN-----------------LFSVDLLVNAYV 171

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + GK   A   +  + + G      + N I++      + E    F  + +++ F  D+ 
Sbjct: 172 KEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVT 231

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           TCNI+L+ LC +G L KA    +  +   +  ++VTYNT+++   K+ R + A  +L +M
Sbjct: 232 TCNIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDM 290

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           E+  +  D YTY  +   L +  R   A      M E                   + P 
Sbjct: 291 EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREV-----------------NLTPD 333

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             SY+  I+    +G+   A+ IF +  ++ +  + +TY  L++G  +  ++
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT 385


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 268/537 (49%), Gaps = 8/537 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY+T+++ L   G++NE  D +S+M + G++P   T+   +   C +G 
Sbjct: 289 MDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGR 348

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A ++   M +    P+V+TY  LI+G   + M   A  L   M    ++P+ VTYN 
Sbjct: 349 IEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM---AIGLFHRMSRDGVVPNTVTYNA 405

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   E+     A  + + + +HG  PN  ++N +I+ YC  G  +KA  ++ NM +  
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGR 465

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTYN +I   C +G+ + A R++++M   G + +  +   ++   C   K++ A 
Sbjct: 466 PTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELAS 525

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N    RG   +EV+Y  LI+GY +DEK + A ++ + MK     P+  TYN +I GL
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++      A ++   +L+  + PD  T++T+I+G C+ G +  AL+  NKMV+    P++
Sbjct: 586 TKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNL 645

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T + L+  L +EG +E+A + F     +G   D VTY  +I       +++ AF  L E
Sbjct: 646 HTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGE 705

Query: 421 MEEKKLGPDRYTY----AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           M      P   TY      +   +V    +      ++   +   IN  V+   +SK  E
Sbjct: 706 MINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAE 765

Query: 477 -EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            + + S   Y   ++     GR+ +A  ++     +    N+ TY + +  L++  K
Sbjct: 766 LDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALK 822



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 258/528 (48%), Gaps = 21/528 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY T+L  L K    + V D    + ++GL PN   YN +++  CK G +++A  +++ +
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            ++   PD +TY  +I G+C    L+ AF +   M+     P+  TY+TLIN    SGR 
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA   I E+  HG+ P   T    I   C  G+I+ A KI  +M++ G  P+  TY +L
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I    +   M  A  +   M R G+  NT+T N +++ L    ++D A ++ N   K G 
Sbjct: 375 ISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGC 431

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  SY  LI GY       +A+ +   M + +  P+  TYN +I G   SG T+ AI 
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIR 491

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L  +  +G  PDE ++  +I GFC   ++E A    N+M+++   P+ VT   L+SG C
Sbjct: 492 VLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYC 551

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++  L+ A +        G   +  TYN LI  L K+     A  L   M E+K+ PD  
Sbjct: 552 KDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVV 611

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY+ +   L  +G +  A +  + MV+ G +                 P+  +YS  I  
Sbjct: 612 TYSTVINGLCNNGAIPLALEMFNKMVKHGCL-----------------PNLHTYSSLIQA 654

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +GR ++A ++F E +++G+  ++ TY+ ++   +   K + +A D
Sbjct: 655 LGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGK-VDRAFD 701



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 235/488 (48%), Gaps = 32/488 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ + YN++++AL K G + +   +++ + K G+ P+  TY  ++ GYC+   L  A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M +    P+  TY+ LING CN+G + EA     EM    +LP V T+   I  
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342

Query: 125 FFESGRSMEAFK--------------------------------LIDELDEHGIKPNAVT 152
             + GR  +A+K                                L   +   G+ PN VT
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVT 402

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N ++    +  +ID A  +   M ++G  P+  +YN LI   C  G+ E+A  M+  M 
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML 462

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           +       +T N I+   C     D A  +L      G   DE SY  LI+G+ +  K  
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKME 522

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  +++EM +R + P+  TY A+I G  +  K + A  ML  + +SG  P+  T+N +I
Sbjct: 523 LASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLI 582

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           HG   +     A +    M+E+   PD+VT + +++GLC  G +  AL+ F   +  G  
Sbjct: 583 HGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL 642

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +  TY++LI +L +E R+E+A  + SE++++ L PD  TY  +    V SG+++ A  F
Sbjct: 643 PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDF 702

Query: 453 TSIMVETG 460
              M+  G
Sbjct: 703 LGEMINAG 710



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 252/524 (48%), Gaps = 30/524 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ VTYN +++ L +  +++    + + M K G +PN ++YN L+ GYC +G  ++A
Sbjct: 395 GVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKA 454

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M + +  P + TYN++I G+C++G  + A R+ + M++    PD  +Y  LI+ 
Sbjct: 455 MSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISG 514

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +   A  + +E+ + G+ PN VT+  +I  YCK+ K+D A +++  M+ +G  P+
Sbjct: 515 FCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPN 574

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI    K  N   A  +  VM  + +  + +T +T+++ LC    +  A  + N
Sbjct: 575 VQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFN 634

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   +  +Y +LI    ++ +   A +++ E+K++ ++P   TY  MI     SG
Sbjct: 635 KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSG 694

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A D L E++ +G  P   T++ +I G  +E    K +   N     +F   I+  +
Sbjct: 695 KVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKD 754

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++   +    + E   +  R             Y+ L+S L +  R  +A  L   M  +
Sbjct: 755 VI--SVLSSKLAELDFELSRQL-----------YDALLSRLSRSGRWFEANNLYRSMVSQ 801

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P++ TY     +L+ + +++ A      M +                 +  +     
Sbjct: 802 SQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSD-----------------QRCELHLTG 844

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           Y E I   C   R K+A  +FE+   + +  ++  +  L+NGL+
Sbjct: 845 YKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLL 888



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 219/520 (42%), Gaps = 93/520 (17%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GCLP+  +YN ++      G   +   +L++M K    P   TYNI++ GYC  G 
Sbjct: 426 MGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD 485

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+RV++LM  N   PD W+Y  LI+G+C    +E A  +  EM    L P+ VTY  
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA 545

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + +  +   A ++++ +   G +PN  T+N++I    K+     A ++ + M E  
Sbjct: 546 LISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VTY+T+I+  C  G +  A  M + M + G   N  T ++++  L  E +++EA 
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAE 665

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK-----------------------L 277
            + +   K+G   DEV+Y  +I       K +RA                         L
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725

Query: 278 WDEMKERQIMP-------STFT---------------------------YNAMIWGLSQS 303
            +EM   +++        STF                            Y+A++  LS+S
Sbjct: 726 QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRS 785

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A ++   ++     P++ T+   +       +V+ A+     M ++        C
Sbjct: 786 GRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQR-------C 838

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            + L+G                            Y  LI +LC+  R ++A  +  +M  
Sbjct: 839 ELHLTG----------------------------YKELICTLCQLHRRKEARFVFEKMLS 870

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           + L  D   +  +   L+ +G  +   +F  IM ET + N
Sbjct: 871 RALNADEIVWTILINGLLGAGYKDLCMEFLHIM-ETNRRN 909



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 20/257 (7%)

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           +AL   D   +R      FTY  ++  L++   T   +D  +++L+ G+ P+   +N++I
Sbjct: 176 QALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVI 235

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +  C +G V  A    NK+ +   KPD  T   ++ G CR   L+ A + F     +G  
Sbjct: 236 NALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            ++ TY+TLI+ LC   R+ +A   +SEM    + P  +T+ A   AL + GR+E+A K 
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKI 355

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              M + G                   P+  +Y+  I+    Q   + A+ +F    + G
Sbjct: 356 FIDMKKKG-----------------CKPNVYTYTSLIS---GQRVSRMAIGLFHRMSRDG 395

Query: 513 IAINKSTYMNLMNGLIK 529
           +  N  TY  LMN L++
Sbjct: 396 VVPNTVTYNALMNVLME 412



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 17/239 (7%)

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           MI   S   +  QA++ L+   Q G      T+ T++            +  +++++ + 
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +P+++  N +++ LC++G +  A          G   D+ TY ++I   C+ R L+ AF
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            + + M+E+   P+  TY+ +   L  SGR+ EA  F S M   G +             
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVL------------- 330

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
               P+  +++  I   C  GR +DA +IF + ++KG   N  TY +L++G    R +I
Sbjct: 331 ----PTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAI 385



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 62/151 (41%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y+ +L  L + G+  E  +L   M  Q   PN+ TY   +    +   +  AM V   M+
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
             +    +  Y  LI   C     +EA  + ++M S  L  D + +  LIN    +G   
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKD 894

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
              + +  ++ +   P++    I+ +   KE
Sbjct: 895 LCMEFLHIMETNRRNPSSHARTILAREALKE 925


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 267/550 (48%), Gaps = 18/550 (3%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C PD V YNT++D  FK+G +N+  DL  +M ++G+ P+  TY+ +V   CK   + 
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A   +  M     LPD WTYN LI G+ + G  +EA R+ KEM    +LPDVV  NTL+
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
               + G+  EA  + D +   G  P+  ++ IM+  Y  +G +     +   M  +G +
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  T+N LI A    G +++A  + + M   G+K + +T  T++  LC   K+D+A   
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N    +G   D+ +Y  LI G+       +A +L  E+    +      + ++I  L +
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+   A ++ +  +  G+ PD   +N ++ G+C  G++EKAL+  + MV    +P++V 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L++G C+ G +++ L  FR  + KG    ++ YN +I  L +  R   A     EM 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA------QKFTSIMVETGKINHQVVQPNTSKTPE 476
           E  +  ++ TY+ +   L ++   +EA       +  ++ ++   +N  +     ++  E
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693

Query: 477 E------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           E            + P +++YS  I     +G  ++A  +F   +  G   +     +++
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753

Query: 525 NGLIKRRKSI 534
             L+K+ + +
Sbjct: 754 RELLKKNEIV 763



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 254/534 (47%), Gaps = 20/534 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  +    + L+ G+C+     EA+ +
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++YN+L+   CN G   +A  L + M     +  PDVV YNT+I+ 
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT++ ++   CK   +DKA   +R M   G  PD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R+ +  + + LNT++ +LC   K+ EA  + +
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  SY  ++ GY           L+D M    I P  +T+N +I   +  G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ P   T+ T+I   C  G+++ A++  N+M+++   PD    +
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V + ++I++LCK  R+ DA  +       
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD   Y  +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNVVG 573

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Y   +N +C  GR  + L +F E  QKGI  +   Y  +++GL +  +++   V
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 256/531 (48%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +YN +L +L  +GK  +  DLL  M + G V  P+   YN ++ G+ K G +
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD+ TY+ +++  C A  +++A    ++M +  +LPD  TYN L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+    I P+ V  N ++   CK GKI +A  +   M   G 
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  +Y  +++     G + +   + D+M   G+  +  T N ++        LD+A +
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 417

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G     V+Y T+I    R  K + A++ +++M ++ ++P  + Y+ +I G  
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A ++++E++ +GM  D   F +II+  C  G+V  A    +  V     PD V
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N+L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +K + P    Y  I   L E+GR   A+     M E+G                 I  +
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG-----------------IAMN 640

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +YS  +        + +A+ +F+E R   + I+  T   ++ G+ + R+
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 190/359 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  T+N ++ A    G L++   + ++M+  G+ P+  TY  +++  C++G 
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM   + M     +PD + Y+ LI G+C  G L +A  L  E+ +  +  D+V + +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR M+A  + D     G+ P+AV +N+++  YC  GK++KA ++   M   G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V Y TL++  CK G ++E   +   M +KG+K +TI  N I+  L    +   A 
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +  +  ++ G  +++ +Y  ++ G F++   + A+ L+ E++   +     T N MI G+
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            Q+ + E+A D+   + +SG++P   T++ +I     EG VE+A    + M     +PD
Sbjct: 687 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 186/380 (48%), Gaps = 5/380 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VTY T++ AL + GK+++  +  + M  QG+VP++  Y+ L+ G+C  G 
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  ++  +  N    D+  +  +IN  C  G + +A  +     ++ L PD V YN 
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +   G+  +A ++ D +   GI+PN V +  ++  YCK G+ID+   + R M + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  + YN +ID   +AG    A      M   G+ MN  T + +L  L   +  DEA 
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L          +D ++  T+I G F+  +   A  L+  +    ++P   TY+ MI  L
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A DM + +  +G  PD    N ++     + ++ +A  + +K+ E++F  + 
Sbjct: 722 LKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 781

Query: 361 VTCNILLS-----GLCREGI 375
           +T  +L+      G CRE I
Sbjct: 782 LTAMLLVDLFSSKGTCREQI 801



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 214/475 (45%), Gaps = 56/475 (11%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P   TY  L++    + R   A     +L   G++ +A+  + ++K +C+  + D+A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 171 KI------------------------------------VRNMEENG--FSPDCVTYNTLI 192
            I                                    +R M E G   SPD V YNT+I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G++ +A  +   M ++G+  + +T ++++H LC  + +D+A   L     +G  
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  +Y  LI GY    +   A++++ EM+ + I+P     N ++  L + GK ++A D+
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + +   G  PD  ++  +++G+ ++G +       + M+     PDI T N+L+     
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L+KA+  F      G     VTY T+I++LC+  +++DA    ++M ++ + PD+Y 
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKTPEEID--------- 479
           Y  +       G L +A++  S ++  G     +    +  N  K    +D         
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 480 -----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P ++ Y+  ++ +C  G+ + AL++F+     GI  N   Y  L+NG  K
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 583



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 144/305 (47%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V + +I++ L K G++ + +++       GL P+   YN+L+ GYC +G +++A+RV 
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      P+V  Y  L+NG+C  G ++E   L +EM    + P  + YN +I+  FE+
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR++ A     E+ E GI  N  T++I+++   K    D+A  + + +       D +T 
Sbjct: 620 GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 679

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NT+I    +   +EEA  +   + R GL    +T + ++  L  E  ++EA  + +S   
Sbjct: 680 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQN 739

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D      ++    +  +  RA     ++ ER       T   ++   S  G   +
Sbjct: 740 AGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799

Query: 309 AIDML 313
            I  L
Sbjct: 800 QIRFL 804


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/424 (31%), Positives = 231/424 (54%), Gaps = 1/424 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P +  +N +L  +      N+     ++ K + +V +  ++ I++ G C+ G ++++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKS 182

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  + +    P+V  Y  LI+G C  G +E+A  L  EM    L+ +  TY  LI+ 
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++G   + F++ +++ EHG+ PN  T+N ++   CK+G+   A K+   M E G S +
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   C+     EA  +MD M   G+  N IT NT++   C  +KL +A  L  
Sbjct: 303 IVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCR 362

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG     V+Y  L++G+ +    + A K+  EM+ER I PS  TY  +I   ++S 
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+AI + + + + G+ PD  T++ +IHGFC +G++ +A +    MVEK F+P+ V  N
Sbjct: 423 NMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYN 482

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+EG   +AL+ FR    K    +  +Y  +I  LCKER+ ++A GL+ +M + 
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDS 542

Query: 425 KLGP 428
            +GP
Sbjct: 543 GIGP 546



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  I++A  +   L+      ++M  +G VP    +N L++         +     +  +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ES 155

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           + K + DV+++ ++I G C AG +E++F L  E+      P+VV Y TLI+   + G   
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L  E+ + G+  N  T+ ++I    K G   +  ++   M+E+G  P+  TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           +  CK G  ++AF++ D M  +G+  N +T NT++  LC E K +EA  +++     G  
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + ++Y TLI G+    K  +AL L  ++K R + PS  TYN ++ G  + G T  A  +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + E+ + G+ P + T+  +I  F     +EKA+Q  + M E    PD+ T ++L+ G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +G + +A + F+S + K    + V YNT++   CKE     A  L  EMEEK+L P+  +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG 460
           Y  +   L +  + +EA+     M+++G
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSG 543



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 188/331 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG + +  TY  ++  LFK G   +  ++   M++ G+ PN  TYN +++  CK G 
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGR 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+A +V D M +     ++ TYN LI G C      EA  +  +M+S  + P+++TYNT
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F    +  +A  L  +L   G+ P+ VT+NI++  +CK+G    A K+V+ MEE G
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTY  LID   ++ NME+A ++   M   GL  +  T + ++H  C + +++EA 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEAS 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  ++ +  +EV Y T++ GY ++  + RAL+L+ EM+E+++ P+  +Y  MI  L
Sbjct: 464 RLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +  K+++A  ++ +++ SG+ P ++  N I
Sbjct: 524 CKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 193/363 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG  P+ V Y T++D   KKG++ + +DL  +M K GLV N  TY +L+ G  K G  K+
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              + + M ++   P++ TYN ++N  C  G  ++AF++  EM    +  ++VTYNTLI 
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                 ++ EA +++D++   GI PN +T+N +I  +C   K+ KA  + R+++  G SP
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VTYN L+   CK G+   A +++  M  +G+K + +T   ++ T      +++A  L 
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  + G   D  +Y  LI G+    + N A +L+  M E++  P+   YN M+ G  + 
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G + +A+ +  E+ +  + P+  ++  +I   C E + ++A     KM++    P     
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSIL 551

Query: 364 NIL 366
           N++
Sbjct: 552 NLI 554



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 220/451 (48%), Gaps = 18/451 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y ++IN +  +  L+ +     EM     +P    +N L+     S    + +   +E  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-S 155

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           +  +  +  +  I+IK  C+ G+I+K+  ++  + E GFSP+ V Y TLID  CK G +E
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A  +   MG+ GL  N  T   ++H L       + + +     + G + +  +Y  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
               +D +   A K++DEM+ER +  +  TYN +I GL +  K  +A ++++++   G+ 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T+NT+I GFC   ++ KAL     +  +   P +VT NIL+SG C++G    A K 
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            +    +G     VTY  LI +  +   +E A  L S MEE  L PD +TY+ +      
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            GR+ EA +    MVE                 ++ +P+ + Y+  +  +C +G    AL
Sbjct: 456 KGRMNEASRLFKSMVE-----------------KKFEPNEVIYNTMVLGYCKEGSSYRAL 498

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           ++F E  +K +  N ++Y  ++  L K RKS
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKS 529


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 261/500 (52%), Gaps = 18/500 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y  +L+ L K       + +L  M K+ +      +  ++  Y + G L+ AMRV+
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVL 192

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M +    PD+   N  I+       L++A R  + M+ +++ P+V+TYN LI  + + 
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDL 252

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVT 187
            R  +A +LI E+   G  P+ +++  ++ + CKE +I +   ++  M +++   PD VT
Sbjct: 253 HRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT 312

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT +    K G+ +EA   +     +  +++ +  + I+H+ C E ++D+A  ++N   
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D V+Y ++I G  ++ K ++A K+  +M +    P+T +Y A++ GL ++G + 
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A +M+N   +   IP+  T++ ++HGF  EG+  +A     +M++K F P  V  N+L+
Sbjct: 433 EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+E  +++A +F    +  G AV+ V + T+I   C++  LE A  LL +M      
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH 552

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  I  AL + GR+EEA K    M+  G I                 P+ ++Y  
Sbjct: 553 PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLI-----------------PTPVTYRT 595

Query: 488 KINEHCSQGRYKDALQIFEE 507
            I+++C  GR +D L++ E+
Sbjct: 596 VIHQYCRMGRVEDLLKLLEK 615



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 241/479 (50%), Gaps = 8/479 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD    NT +  L    +L++    L  M+   + PN  TYN L+ GYC L  
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHR 254

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA-FRLRKEMESLKLLPDVVTYN 119
           L++AM ++  M      PD  +Y  ++   C    ++E    + K ++   LLPD VTYN
Sbjct: 255 LEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYN 314

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T ++   + G   EA + + E +E   + + V ++ ++  +C+EG++DKA +IV  M   
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY ++I+  C+   +++A +M+  M + G K NT++   +L+ LC      EA
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++Y  L+ G+ R+ K++ A  L  EM ++   P+    N +I  
Sbjct: 435 REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 494

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L Q  K ++A   + + L +G   +   F T+IHGFC +  +E AL   + M   +  PD
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT   ++  L ++G +E+A K     +  G     VTY T+I   C+  R+ED   LL 
Sbjct: 555 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLE 614

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KIN----HQVVQPNTSK 473
           +M  ++    R  Y  +   L   G LE+A K    ++ T  KI+    H +++   SK
Sbjct: 615 KMLSRQ--ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSK 671



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 237/462 (51%), Gaps = 3/462 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           GC PD ++Y T++  L K+ ++ EVR L+  M K   L+P++ TYN  V    K G   E
Sbjct: 269 GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 328

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +    + +   D   Y+ +++ +C  G +++A  +  EM S   +PDVVTY ++IN
Sbjct: 329 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVIN 388

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +  +  +A K++ ++ +HG KPN V++  ++   CK G   +A +++   EE+ + P
Sbjct: 389 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIP 448

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TY+ L+    + G   EA  ++  M +KG     + +N ++ +LC E+K+DEA   +
Sbjct: 449 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G  ++ V++ T+I G+ + +    AL L D+M      P   TY  +I  L + 
Sbjct: 509 EQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKK 568

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E+A  +  ++L+ G+IP   T+ T+IH +C  G+VE  L+   KM+ +  +      
Sbjct: 569 GRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAY 626

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  LC  G LE+A K     +     +D+ T + LI S   +     ++ +   M  
Sbjct: 627 NQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFN 686

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           + L PD      +   L+  G+ EEA K     VE G+I+ Q
Sbjct: 687 RNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 728



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 186/386 (48%), Gaps = 22/386 (5%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           +P A  + +M+  Y + GK+  A +++  M++ G  PD    NT I        +++A R
Sbjct: 168 RPEAFGY-VMVS-YSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 225

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            ++ M    ++ N IT N ++   C   +L++A  L+     +G   D++SY T + G+ 
Sbjct: 226 FLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYT-VMGFL 284

Query: 267 RDEKANRALKLWDE--MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             EK  + ++L  E  +K+  ++P   TYN  +  LS+ G  ++A++ L E  +     D
Sbjct: 285 CKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 344

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           +  ++ I+H FC EG+++KA +  N+M  K   PD+VT   +++GLC+E  +++A K  R
Sbjct: 345 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLR 404

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G   ++V+Y  L++ LCK     +A  +++  EE    P+  TY+ +       G
Sbjct: 405 QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREG 464

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +  EA      M++ G                   P+ +  +  I   C + +  +A + 
Sbjct: 465 KSSEACDLVREMIKKGFF-----------------PTPVEINLLIQSLCQEEKVDEAKRF 507

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
            E+    G A+N   +  +++G  ++
Sbjct: 508 MEQCLNNGCAVNVVNFTTVIHGFCQK 533



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 168/360 (46%), Gaps = 19/360 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D + Y  +++   K    + A R++ +M ++ ++        ++ +     KL  A 
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K G   D     T I       + ++A++  + M+  +I P+  TYN +I G 
Sbjct: 190 RVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGY 249

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPD 359
               + E A++++ E+   G  PD+ ++ T++   C E ++++      KM++ S   PD
Sbjct: 250 CDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPD 309

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N  +  L + G  ++AL+F R    +   VD V Y+ ++ S C+E R++ A  +++
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  K   PD  TY ++   L +  ++++A+K    M + G       +PNT        
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG------CKPNT-------- 415

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +SY+  +N  C  G   +A ++   + +     N  TY  LM+G  +  KS S+A D
Sbjct: 416 ---VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS-SEACD 471


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 159/598 (26%), Positives = 291/598 (48%), Gaps = 82/598 (13%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V Y+ +++   + G+ N+ R +L  +  +G  PN  TY +LV GYC    ++EA  VV  
Sbjct: 279 VAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQE 338

Query: 71  MTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           + +NK L  D   +  +ING+C  G +E+A RL  EM   +L  ++  YN +IN + + G
Sbjct: 339 IRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLG 398

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R +EA  ++ E+   G++P+  ++N ++  YCK+G ++KA +    M  NGF+   +TYN
Sbjct: 399 RMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYN 458

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRK----------------------------------- 214
            L+   C  G++++A R+  +M +K                                   
Sbjct: 459 ALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLAR 518

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           GL  NT T NT+++ LC  +++ EA  L++   +     D ++Y TL +GY +    +RA
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRA 578

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            ++ +E++     P+   +N++I G   + +  +  D+L E+   G+ P+   +  +I G
Sbjct: 579 SRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAG 638

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK----- 389
           +C EG +  A   + +M+EK   P++  C+ L+S   R+G  ++A    ++ +       
Sbjct: 639 WCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPD 698

Query: 390 --------GKA---VDSVT----------YNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
                   GK    +D+V           +N +I  LCK  R+EDA  LL+++++K    
Sbjct: 699 ISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVA 758

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----SKTPE------- 476
           D +TY+++      SG ++ A      M+  G +   +V  N+      K+ E       
Sbjct: 759 DNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG-LTPNIVTYNSLIYGLCKSGELSRAVSL 817

Query: 477 -------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                   I P++I+Y+  I++HC  G   +A ++ +   ++GI     TY  L+NGL
Sbjct: 818 FKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 243/484 (50%), Gaps = 26/484 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  +YN+++D   KKG +N+  +  + M + G      TYN L+ G+C LG 
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+R+  LM +    P+  + + L++G+  +G  E+A  L KE  +  L  +  T+NT
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNT 529

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   +  R  EA +L+D++ +    P+ +T+  +   YCK G +D+A +I+  +E  G
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F+P    +N+LI  +  A    +   ++  M  +GL  NT+    ++   C E  L  AY
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP------------ 288
            L     ++G   +     +L++ ++R  K + A  +   +    ++P            
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKV 709

Query: 289 --------------STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
                         +   +N +I+GL + G+ E A ++L +L   G + D  T++++IHG
Sbjct: 710 ANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG 769

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
             + G V+ A    + M+     P+IVT N L+ GLC+ G L +A+  F+    KG + +
Sbjct: 770 CSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPN 829

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           ++TYNTLI   CK+  + +AF L   M E+ + P  +TY+ +   L   G +EEA K   
Sbjct: 830 AITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLD 889

Query: 455 IMVE 458
            M+E
Sbjct: 890 QMIE 893



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 260/544 (47%), Gaps = 43/544 (7%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YN +++   K G++ E  ++L +M   G+ P+  +YN LV GYCK G + +A    + M
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM 445

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N       TYN L+ G+C+ G +++A RL   M    + P+ ++ +TL++ FF+SG++
Sbjct: 446 LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT 505

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A  L  E    G+  N  T N +I   CK  ++ +A ++V  M++    PD +TY TL
Sbjct: 506 EKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
               CK G+M+ A R+++ +   G        N+++      K+  +   +L   S RG 
Sbjct: 566 FSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGL 625

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + V+YG LI G+ ++   + A  L+ EM E+ ++P+ F  ++++    + GK ++A  
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 312 MLNELLQSGMIPD--------------------------ETTFNTIIHGFCSEGQVEKAL 345
           +L  L+ + MIPD                          +  +N +I G C  G++E A 
Sbjct: 686 VLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
                + +K F  D  T + L+ G    G ++ A     + +  G   + VTYN+LI  L
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK   L  A  L  ++  K + P+  TY  +     + G + EA K    M+E G     
Sbjct: 806 CKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG----- 860

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       I P+  +YS  IN  C+QG  ++A+++ ++  +  +  N  TY  L+ 
Sbjct: 861 ------------IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908

Query: 526 GLIK 529
           G ++
Sbjct: 909 GYVR 912



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 210/424 (49%), Gaps = 26/424 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++ +T+LD  FK GK  +  +L  +   +GL  N TT+N +++G CK+  + EA
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +VD M Q +  PD+ TY  L +G+C  G ++ A R+  E+E+L   P +  +N+LI  
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F + +  +   ++ E+   G+ PN V +  +I  +CKEG +  A  +   M E G  P+
Sbjct: 604 HFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPN 663

Query: 185 CVTYNTLIDANCKAGNMEEA--------------------------FRMMDVMGRKGLKM 218
               ++L+    + G  +EA                             +D +       
Sbjct: 664 LFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHS 723

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
             I  N ++  LC   ++++A  LL     +G+  D  +Y +LI G       + A  L 
Sbjct: 724 AKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLR 783

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           D M    + P+  TYN++I+GL +SG+  +A+ +  +L   G+ P+  T+NT+I   C +
Sbjct: 784 DTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKD 843

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G + +A +   +M+E+   P + T +IL++GLC +G +E+A+K     I      + VTY
Sbjct: 844 GYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTY 903

Query: 399 NTLI 402
            TLI
Sbjct: 904 WTLI 907



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/596 (24%), Positives = 275/596 (46%), Gaps = 82/596 (13%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +++ +L AL   G+L+    +  +M+  G   +  + N +++   + G L   + V + M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +  +LPD +T  ++   +C    +  A    +EM  + +  ++V Y+ ++N + E G++
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNT 190
            +A +++D L   G  PN VT+ +++K YC E  +++A  +V+ + +N     D   +  
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +I+  C+ G ME+A R+++ M    L++N    N +++  C   ++ EA+ +L+  +  G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM-------------- 296
              D  SY +L+ GY +    N+A + ++ M       +T TYNA+              
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 297 -IW--------------------GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            +W                    G  +SGKTE+A+++  E L  G+  + TTFNT+I+G 
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA---------------L 380
           C   ++ +A +  +KM +    PDI+T   L SG C+ G +++A               +
Sbjct: 535 CKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTI 594

Query: 381 KFFRSWIL--------------------KGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +FF S I                     +G + ++V Y  LI+  CKE  L  A+ L  E
Sbjct: 595 EFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLE 654

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN--TSKTPEEI 478
           M EK L P+ +  +++ +     G+ +EA      +V T  I   +  P     K    I
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIP-DISAPRLEIGKVANFI 713

Query: 479 D--------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           D         + I ++  I   C  GR +DA  +  + + KG   +  TY +L++G
Sbjct: 714 DTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG 769



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 181/364 (49%), Gaps = 32/364 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ + C PD +TY T+     K G ++    +L++++  G  P    +N L++G+     
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHF---I 606

Query: 61  LKEAMRVVDLMTQ--NKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            K+  +V D++ +  N+ L P+   Y  LI GWC  G L  A+ L  EM    L+P++  
Sbjct: 607 AKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFI 666

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNA--------------------------V 151
            ++L++ F+  G+  EA  ++  L    + P+                           +
Sbjct: 667 CSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKI 726

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             NI+I   CK G+I+ A  ++ ++++ GF  D  TY++LI     +G ++ AF + D M
Sbjct: 727 MWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTM 786

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GL  N +T N++++ LC   +L  A  L      +G   + ++Y TLI  + +D   
Sbjct: 787 LSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYI 846

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A KL   M E  I P+ FTY+ +I GL   G  E+AI +L++++++ + P+  T+ T+
Sbjct: 847 TEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTL 906

Query: 332 IHGF 335
           I G+
Sbjct: 907 IQGY 910



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 143/279 (51%), Gaps = 33/279 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPN-------------------- 44
           G +P+    ++++   ++KGK +E   +L ++    ++P+                    
Sbjct: 659 GLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAG 718

Query: 45  ------RTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE 98
                 +  +NI++ G CKLG +++A  ++  +     + D +TY+ LI+G   +G ++ 
Sbjct: 719 GNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDV 778

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           AF LR  M S+ L P++VTYN+LI    +SG    A  L  +L   GI PNA+T+N +I 
Sbjct: 779 AFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLID 838

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
            +CK+G I +A K+ + M E G  P   TY+ LI+  C  G MEEA +++D M    +  
Sbjct: 839 KHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDP 898

Query: 219 NTITLNTILHTLC-CEK------KLDEAYMLLNSASKRG 250
           N +T  T++     CE        LD++ +++ ++ +R 
Sbjct: 899 NYVTYWTLIQGYVRCESVDVPIMPLDQSTIVVKASPRRA 937



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 178/382 (46%), Gaps = 18/382 (4%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +A + +++++     G++D A ++   M   G      + N++++   + G++     + 
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M R G   +  T+  +    C  K +  A   +   +K G  ++ V+Y  ++ GY   
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIPDETT 327
            + N A ++ D +  R   P+  TY  ++ G       E+A  ++ E+ ++  ++ DE  
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           F  +I+G+C  G++E A +  N+MV+   + ++   NI+++G C+ G + +A        
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   D+ +YN+L+   CK+  +  AF   + M          TY A+       G ++
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A +   +M++ G                 I P+ IS S  ++     G+ + AL +++E
Sbjct: 472 DALRLWFLMLKKG-----------------IAPNEISCSTLLDGFFKSGKTEKALNLWKE 514

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
           T  +G+A N +T+  ++NGL K
Sbjct: 515 TLARGLAKNTTTFNTVINGLCK 536



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 162/354 (45%), Gaps = 18/354 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           FS    +++ L+ A   AG ++ A ++ D M   G +++  + N+IL+ L     L    
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATV 228

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     + G   D+ +   +   Y + +    AL+  +EM +  +  +   Y+A++ G 
Sbjct: 229 AVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGY 288

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPD 359
            + G+T  A  ML+ L   G  P+  T+  ++ G+C+E  +E+A     ++ + K    D
Sbjct: 289 CEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVD 348

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
                 +++G C+ G +E A +     +     V+   YN +I+  CK  R+ +A  +L 
Sbjct: 349 EAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILH 408

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM    + PD Y+Y ++     + G + +A +  + M+  G                   
Sbjct: 409 EMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNG-----------------FA 451

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            ++++Y+  +   CS G   DAL+++    +KGIA N+ +   L++G  K  K+
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT 505


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 221/436 (50%), Gaps = 1/436 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D    NT++    + G L + R LL  M       +  TY ILV+ +C+ G 
Sbjct: 187 MLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQ 246

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E    ++L   +        YN +I G+   G L EA +L +   + + +PDV TYN 
Sbjct: 247 MHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNL 306

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +S +  EA  L  E ++ G+  +  T++ ++  + K G+  KA ++  NM++ G
Sbjct: 307 LIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAG 365

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V YN LI    K G ++EA  +++ M RKG+  +  T N ++  L    + ++AY
Sbjct: 366 CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAY 425

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  +R +  D V+Y TL+ G  +  + + A  L+DEM+  + MP   T+  +I  L
Sbjct: 426 SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 485

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +++G+ E A++    L++ G  P+   +N +I GFC  GQV+K  +    M+E S  PD 
Sbjct: 486 AKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDS 545

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T  IL+ G  R G    A++  +  + +G      TYN LI SL    ++EDA+ L  E
Sbjct: 546 ITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKE 605

Query: 421 MEEKKLGPDRYTYAAI 436
           M  K   PD  TY+A+
Sbjct: 606 MIAKGFNPDMQTYSAL 621



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 254/525 (48%), Gaps = 25/525 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEAMRVVD 69
           VT    + A  + G L+    +L DM++     P+   +   +   C++  +++AM + D
Sbjct: 54  VTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFD 113

Query: 70  LMTQN-KSLPDVWTYNMLINGWCNAGMLEEA---FRLRKEMESLKLLPDVVTYNTLINRF 125
            M +     PDV  YN LI G+C AG  + A   FR  K+  S K  P+ V+++TL+   
Sbjct: 114 DMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCK--PNAVSFDTLVIFL 171

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +  R+ +A  +  E+   G+K +    N +I   C+ G + +A +++ +M  +  + D 
Sbjct: 172 CKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDA 231

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY  L++A+C+AG M E    M++    G  ++ +  N I+       +L EA  L  S
Sbjct: 232 FTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFES 291

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +    D  +Y  LI    + ++   AL L+ E ++  ++   FTY+ ++    ++G+
Sbjct: 292 TMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGR 350

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A+++   + ++G +PD   +N +I     +G+V++AL+    M  K   PD  T NI
Sbjct: 351 AAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 410

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++  L   G  EKA  FF     +  + D VTYNTL++ L K RR ++A  L  EM+  K
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD  T+  +   L ++GR+E+A + ++ +V+ G                   P+S  Y
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHA-----------------PNSYIY 513

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +  I+  C  G+     ++F++  +     +  TY  L+ G  +R
Sbjct: 514 NALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRR 558



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 254/540 (47%), Gaps = 21/540 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEA 64
           C PD V +   +  L +  ++ +   L  DM++     P+   YN L++GYCK G    A
Sbjct: 85  CQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRA 144

Query: 65  MRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           + +   + Q  S  P+  +++ L+   C      +A  + +EM    L  DV   NTLI+
Sbjct: 145 LDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIH 204

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G   +A +L+  +  H    +A T+ I++  +C+ G++ +    +     +G + 
Sbjct: 205 CTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCAL 264

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             V YN +I    + G + EA ++ +    K    +  T N +L  LC  K+L+EA  L 
Sbjct: 265 SAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEEALTLF 323

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             A + G  LD  +Y  L+  + +  +A +AL+++  M++   MP T  YN +I  L + 
Sbjct: 324 QEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQ 383

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK ++A+++L ++ + G++PD  T+N +I    S G+ EKA  F   M  +   PD+VT 
Sbjct: 384 GKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTY 443

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N LL+GL +    ++A   F          D  T+ TLI +L K  R+EDA    + + +
Sbjct: 444 NTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVK 503

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVV------QPNTSK 473
               P+ Y Y A+ +    SG++++  +    M+E       I + ++      + +TS 
Sbjct: 504 MGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSM 563

Query: 474 TPEEID--------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             E +         P+  +Y+  I      G+ +DA  +F+E   KG   +  TY  L N
Sbjct: 564 AMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 182/421 (43%), Gaps = 21/421 (4%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VT    I  F  +G    A  ++D++      +P+ V     + W C+  ++++A  +  
Sbjct: 54  VTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFD 113

Query: 175 NMEEN-GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG-LKMNTITLNTILHTLCC 232
           +M E    +PD V YNTLI   CKAG+ + A  M   + ++G  K N ++ +T++  LC 
Sbjct: 114 DMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCK 173

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +  +A  +       G   D     TLI    R     +A +L   M         FT
Sbjct: 174 MSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFT 233

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  ++    ++G+  +    +      G       +N II GF   G++ +A Q     +
Sbjct: 234 YGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTM 293

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K   PD+ T N+L++ LC+   LE+AL  F+     G  +D  TY+ L+ +  K  R  
Sbjct: 294 TKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAA 352

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  +   M++    PD   Y  + + L + G+++EA +    M   G            
Sbjct: 353 KALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG------------ 400

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                I P   +Y+  I+   S GRY+ A   F   +++  + +  TY  L+NGL K R+
Sbjct: 401 -----IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 455

Query: 533 S 533
           +
Sbjct: 456 T 456



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 162/371 (43%), Gaps = 26/371 (7%)

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           +++ + G   D  T   ++   CK G  E    ++  + +KG+ ++ +T    +      
Sbjct: 7   KHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRA 66

Query: 234 KKLDEAYMLLNSASKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKER-QIMPST 290
             LD A  +L+   +RG +   D V++   +       +  +A+ L+D+M+E     P  
Sbjct: 67  GDLDAAMGMLDDM-RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDV 125

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHN 349
             YN +I G  ++G  ++A+DM   L Q G   P+  +F+T++   C   +   AL    
Sbjct: 126 VAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQ 185

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M+    K D+  CN L+   CR G+L +A +          A D+ TY  L+++ C+  
Sbjct: 186 EMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAG 245

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQ 468
           ++ +    +              Y  I    +  GRL EA Q F S M            
Sbjct: 246 QMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTM------------ 293

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                T E + P   +Y+  I   C   + ++AL +F+E  Q G+ ++  TY  LM+   
Sbjct: 294 -----TKESV-PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFG 346

Query: 529 KRRKSISKAVD 539
           K  ++ +KA++
Sbjct: 347 KAGRA-AKALE 356



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P++  YN ++    + G++++  +L  DM +    P+  TY ILV G+ + G    A
Sbjct: 505 GHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 564

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           M ++  M +    P + TYN+LI     AG +E+A+ L KEM +    PD+ TY+ L N
Sbjct: 565 MELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 110/294 (37%), Gaps = 55/294 (18%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM------------ 321
           AL  +  + +  +     T  AM+  + + G+TE   ++L EL Q G+            
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 322 ------------------------IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-F 356
                                    PD   F   +H  C   +VE+A+   + M E    
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA-VDSVTYNTLISSLCKERRLEDAF 415
            PD+V  N L++G C+ G  ++AL  FR    +G    ++V+++TL+  LCK  R  DA 
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            +  EM    L  D      +       G L +A++    M                 T 
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM-----------------TA 224

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 + +Y   +N HC  G+  +     E  R  G A++   Y  ++ G I+
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIR 278


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 251/534 (47%), Gaps = 53/534 (9%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D+   + ++G  P+  T N  +S   K    ++   V  +M++  + PDV+++  +IN  
Sbjct: 172 DVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEG-ACPDVFSFTNVINAL 230

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C  G +E A  L  +ME L + P+VVTYN +IN   ++GR   AF+L +++   G++PN 
Sbjct: 231 CKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNL 290

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
            T+  +I    K    DK   I+  M   GF+P+ V +N LID  CK GN+E A ++ DV
Sbjct: 291 KTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDV 350

Query: 211 MGRKGLKMNTITLNT-----------------------------------ILHTLCCEKK 235
           M  K +   ++TL +                                   ++H LC + +
Sbjct: 351 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR 410

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
              A+        R +   ++    L+ G  +D K   A +LW  + E+    S  T NA
Sbjct: 411 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 470

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL  +GK  +A  ++ E+L+ G+  D  T+N +I GFC+EG+VE   +   +M ++ 
Sbjct: 471 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +PDI T N LL GLC  G L+ A+K +  +   G   +  TY  ++   CK  R+ED  
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            L +E+  KK+  +   Y  I  A  ++G +  A +    M   G               
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG--------------- 635

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I P+  +YS  I+  C+ G  +DA  + +E R++G   N   Y  L+ G  K
Sbjct: 636 --ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 687



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 256/529 (48%), Gaps = 17/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYN I++ L + G+L+   +L   M  +G+ PN  TY  L++G  KL +
Sbjct: 246 MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNF 305

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +   ++D M      P+V  +N LI+G+C  G +E A +++  M S  + P  VT  +
Sbjct: 306 FDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS 365

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F +S +   A   ++E+   G+  +      ++ W CK+ +   A +  + M    
Sbjct: 366 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 425

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P  +    L+   CK G   EA  +   +  KG   + +T N ++H LC   KL EA 
Sbjct: 426 FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 485

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++    +RG  +D ++Y  LI G+  + K     +L +EM +R I P  +TYN ++ GL
Sbjct: 486 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 545

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              GK + AI + +E   SG+I +  T+  ++ G+C   ++E      N+++ K  + + 
Sbjct: 546 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 605

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  NI++   C+ G +  AL+   +   KG   +  TY++LI  +C    +EDA  L+ E
Sbjct: 606 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 665

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++   P+   Y A+     + G+++ A+   S  +E    N              I P
Sbjct: 666 MRKEGFVPNVVCYTALIGGYCKLGQMDTAE---STWLEMISFN--------------IHP 708

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +Y+  I+ +C  G  + A  +  + ++ GI  +  TY  L NG  K
Sbjct: 709 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 757



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 227/491 (46%), Gaps = 35/491 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  +++ L K    ++V  +L +M   G  PN   +N L+ GYCK+G ++ A
Sbjct: 285 GVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGA 344

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA------------------------- 99
           +++ D+M      P   T   L+ G+C +  +E A                         
Sbjct: 345 LKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHW 404

Query: 100 ----------FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                     FR  K M S    P  +    L+    + G+ +EA +L   L E G   +
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 464

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT N +I   C  GK+ +A +IV+ M E G   D +TYN LI   C  G +E  FR+ +
Sbjct: 465 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 524

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M ++G++ +  T N +L  LC   KLD+A  L +     G   +  +YG ++ GY +  
Sbjct: 525 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 584

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +      L++E+  +++  ++  YN +I    Q+G    A+ +L  +   G++P+  T++
Sbjct: 585 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 644

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++IHG C+ G VE A    ++M ++ F P++V    L+ G C+ G ++ A   +   I  
Sbjct: 645 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 704

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
               +  TY  +I   CK   +E A  LL +M+E  + PD  TY  +     ++  ++ A
Sbjct: 705 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 764

Query: 450 QKFTSIMVETG 460
            K    M   G
Sbjct: 765 FKVCDQMATEG 775



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 193/363 (53%), Gaps = 2/363 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P ++    ++  L K GK  E  +L   + ++G   ++ T N L+ G C  G L EA R+
Sbjct: 428 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI 487

Query: 68  VDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V  M + + LP D  TYN LI G+CN G +E  FRLR+EM    + PD+ TYN L+    
Sbjct: 488 VKEMLE-RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLC 546

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+  +A KL DE    G+  N  T+ IM++ YCK  +I+    +   +       + +
Sbjct: 547 NVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSI 606

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN +I A+C+ GN+  A ++++ M  KG+  N  T ++++H +C    +++A  L++  
Sbjct: 607 VYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM 666

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G+  + V Y  LI GY +  + + A   W EM    I P+ FTY  MI G  + G  
Sbjct: 667 RKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNM 726

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A ++L ++ +SG++PD  T+N + +GFC    ++ A +  ++M  +    D +T   L
Sbjct: 727 EKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTL 786

Query: 367 LSG 369
           + G
Sbjct: 787 VHG 789



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 194/400 (48%), Gaps = 2/400 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G    PDN    +++  L KK + +        M  +   P+     +LV G CK G   
Sbjct: 390 GLSIHPDNCY--SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHL 447

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA  +   + +  S     T N LI+G C AG L EA R+ KEM    L  D +TYN LI
Sbjct: 448 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 507

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             F   G+    F+L +E+ + GI+P+  T+N +++  C  GK+D A K+    + +G  
Sbjct: 508 LGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 567

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            +  TY  +++  CKA  +E+   + + +  K +++N+I  N I+   C    +  A  L
Sbjct: 568 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 627

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L +   +G   +  +Y +LI G         A  L DEM++   +P+   Y A+I G  +
Sbjct: 628 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 687

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ + A     E++   + P++ T+  +I G+C  G +EKA     KM E    PD+VT
Sbjct: 688 LGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVT 747

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            N+L +G C+   ++ A K       +G  VD +TY TL+
Sbjct: 748 YNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 176/325 (54%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VT N ++  L   GKL E   ++ +M ++GL  +R TYN L+ G+C  G ++   R+ + 
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           MT+    PD++TYN L+ G CN G L++A +L  E ++  L+ ++ TY  ++  + ++ R
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +   L +EL    ++ N++ +NI+IK +C+ G +  A +++ NM+  G  P+C TY++
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C  G +E+A  ++D M ++G   N +    ++   C   ++D A           
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 705

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            + ++ +Y  +I GY +     +A  L  +MKE  I+P   TYN +  G  ++   + A 
Sbjct: 706 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 765

Query: 311 DMLNELLQSGMIPDETTFNTIIHGF 335
            + +++   G+  DE T+ T++HG+
Sbjct: 766 KVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 196/406 (48%), Gaps = 21/406 (5%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           E  +  E F+++ E    G  P+  +   +I   CK GK++ A ++   ME+ G SP+ V
Sbjct: 201 EFEKCCEVFRVMSE----GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVV 256

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN +I+  C+ G ++ AF + + M  KG++ N  T   +++ L      D+   +L+  
Sbjct: 257 TYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEM 316

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G+  + V +  LI GY +      ALK+ D M  + I P++ T  +++ G  +S + 
Sbjct: 317 IGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQI 376

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E A + L E+L SG+        +++H  C + +   A +F   M+ ++F+P  +   +L
Sbjct: 377 EHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTML 436

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLC++G   +A + +   + KG     VT N LI  LC   +L +A  ++ EM E+ L
Sbjct: 437 VCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGL 496

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             DR TY A+       G++E   +    M + G                 I P   +Y+
Sbjct: 497 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRG-----------------IQPDIYTYN 539

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +   C+ G+  DA+++++E +  G+  N  TY  +M G  K  +
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 135/261 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN +L  L   GKL++   L  + K  GL+ N  TY I++ GYCK   +++ 
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + +   K   +   YN++I   C  G +  A +L + M+S  +LP+  TY++LI+ 
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 649

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   +A  LIDE+ + G  PN V +  +I  YCK G++D A      M      P+
Sbjct: 650 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 709

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  +ID  CK GNME+A  ++  M   G+  + +T N + +  C    +D A+ + +
Sbjct: 710 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 769

Query: 245 SASKRGYYLDEVSYGTLITGY 265
             +  G  +DE++Y TL+ G+
Sbjct: 770 QMATEGLPVDEITYTTLVHGW 790



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P+  TY  ++D   K G + +  +LL  MK+ G+VP+  TYN+L +G+CK   
Sbjct: 701 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 760

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           +  A +V D M       D  TY  L++GW
Sbjct: 761 MDNAFKVCDQMATEGLPVDEITYTTLVHGW 790


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 268/547 (48%), Gaps = 47/547 (8%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  NT++    ++G+++E   L+  M+ +GL PN  T+N  +S  CK G + +A R+ + 
Sbjct: 213 VVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFND 272

Query: 71  MTQN--KSLP--DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           M +   + LP  D  T++++++G+C AGM++EA  L   M     L  V +YN  ++   
Sbjct: 273 MQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLV 332

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +G   EA +L+ E+   G++PN+ T+NI++   CKEGK     K+   ++    +PD V
Sbjct: 333 RNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVV 392

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +L+ A C  GN   A R++D M +KG   N+ T N +L +L    ++ EA  LL   
Sbjct: 393 TYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERM 452

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-----------------------KE 283
           S++GY LD  S   +I G  R+ K + A+ + D M                         
Sbjct: 453 SEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSS 512

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           ++ +P   TY+ ++  L + G+ ++A   L E++   + PD   ++T IHG+C  G+   
Sbjct: 513 KRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSL 572

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A++    M +K  KP   T N+L+ G   +   ++ LK       KG   + +TYN+LI 
Sbjct: 573 AVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIK 632

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKI 462
           S C+   +  A  LL EM + ++ P+  ++  +  A  ++     AQ+ F + +   G+ 
Sbjct: 633 SFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQ- 691

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                               + YS    +  + GR+ +A+ I E   +  I+I++  Y  
Sbjct: 692 ------------------KEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQ 733

Query: 523 LMNGLIK 529
           ++ GL K
Sbjct: 734 IIEGLCK 740



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 240/479 (50%), Gaps = 30/479 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT++ +L    + G ++E R L+  M+  G +    +YN  +SG  + G + EA  +
Sbjct: 284 PDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQEL 343

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLINR 124
           +  M      P+ +TYN++++G C  G   +AF +RK  + +K   + PDVVTY +L++ 
Sbjct: 344 LREMAHEGVQPNSYTYNIIVDGLCKEG---KAFDVRKVEDFVKSGVMTPDVVTYTSLLHA 400

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G +  A +++DE+ + G  PN+ T+N++++   K G+I +A +++  M E G+S D
Sbjct: 401 YCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLD 460

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVM--------GRKGLKM---------------NTI 221
             + N +ID  C+   ++ A  ++D M        GR G                  + I
Sbjct: 461 TASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRI 520

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T +T++  LC E + DEA   L     +    D V Y T I GY +  K + A+K+  +M
Sbjct: 521 TYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDM 580

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           +++   PST TYN +IWG  +   +++ + +++E+   G+ P+  T+N++I  FC  G V
Sbjct: 581 EKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMV 640

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
            KA+   ++M++    P+I +  +L+   C+      A + F +  L       V Y+ +
Sbjct: 641 NKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDA-SLSTCGQKEVLYSLM 699

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            + L    R  +A  +L  + E ++   R+ Y  I   L +   ++   +   +++  G
Sbjct: 700 CTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKG 758



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 241/486 (49%), Gaps = 58/486 (11%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           PDV+T N+L+   C AG +E A R+   M       +  ++  L   +  +GRSM+A  +
Sbjct: 148 PDVFTRNILLQALCAAGRMELARRVFDAMPE----RNEFSFGILARGYCRAGRSMDALGV 203

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +D +       N V  N ++  +C+EG++D+A ++V  M + G +P+ VT+N  I A CK
Sbjct: 204 LDSMPTM----NLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCK 259

Query: 198 AGNMEEAFRMMDVMGRK---GL-KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           AG + +A+R+ + M  K   GL + + +T + +L   C    +DEA +L++     G+  
Sbjct: 260 AGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLR 319

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM- 312
              SY   ++G  R+     A +L  EM    + P+++TYN ++ GL + GK   A D+ 
Sbjct: 320 RVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGK---AFDVR 376

Query: 313 -LNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            + + ++SG M PD  T+ +++H +CSEG    A +  ++M +K   P+  T N+LL  L
Sbjct: 377 KVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSL 436

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM--------- 421
            + G + +A +       KG ++D+ + N +I  LC+  +L+ A  ++  M         
Sbjct: 437 WKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALG 496

Query: 422 --------------EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
                           K+  PDR TY+ + +AL + GR +EA+K    M+  GK      
Sbjct: 497 RLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMI--GK------ 548

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                    +I P S+ Y   I+ +C  G+   A+++  +  +KG   +  TY  L+ G 
Sbjct: 549 ---------DISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGF 599

Query: 528 IKRRKS 533
            ++  S
Sbjct: 600 REKHNS 605



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 251/563 (44%), Gaps = 53/563 (9%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YN +L A  ++ + + V  L  D+   G  P+  T NIL+   C  G ++ A RV D M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +       +++ +L  G+C AG   +A  +   M ++ L    V  NT++  F   G+ 
Sbjct: 177 PERNE----FSFGILARGYCRAGRSMDALGVLDSMPTMNL----VVCNTVVAGFCREGQV 228

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME---ENGFS-PDCVT 187
            EA +L++ + + G+ PN VT N  I   CK G++  A +I  +M+   E G   PD VT
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVT 288

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           ++ ++   C+AG ++EA  ++D+M   G      + N  L  L     + EA  LL   +
Sbjct: 289 FDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMA 348

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   +  +Y  ++ G  ++ KA    K+ D +K   + P   TY +++      G   
Sbjct: 349 HEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAA 408

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +L+E+ Q G  P+  T+N ++      G++ +A +   +M EK +  D  +CNI++
Sbjct: 409 AANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIII 468

Query: 368 SGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNTLISS 404
            GLCR   L+ A+        +G                          D +TY+TL+S+
Sbjct: 469 DGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSA 528

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---- 460
           LCKE R ++A   L EM  K + PD   Y        + G+   A K    M + G    
Sbjct: 529 LCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPS 588

Query: 461 -----------KINH---QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
                      +  H   ++++  +    + I P+ ++Y+  I   C +G    A+ + +
Sbjct: 589 TRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLD 648

Query: 507 ETRQKGIAINKSTYMNLMNGLIK 529
           E  Q  I  N +++  L+    K
Sbjct: 649 EMLQNEIVPNITSFELLIKAFCK 671



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 212/501 (42%), Gaps = 73/501 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P++ TYN I+D L K+GK  +VR +   +K   + P+  TY  L+  YC  G    A
Sbjct: 351 GVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++D M Q    P+ +TYN+L+     AG + EA RL + M       D  + N +I+ 
Sbjct: 411 NRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDG 470

Query: 125 FFESGRSMEAFKLIDELDEHG-----------------------IKPNAVTHNIMIKWYC 161
              + +   A  ++D +   G                         P+ +T++ ++   C
Sbjct: 471 LCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALC 530

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           KEG+ D+A K +  M     SPD V Y+T I   CK G    A +++  M +KG K +T 
Sbjct: 531 KEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTR 590

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T                                   Y  LI G+     ++  LKL  EM
Sbjct: 591 T-----------------------------------YNLLIWGFREKHNSDEILKLISEM 615

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           K + I P+  TYN++I    + G   +A+ +L+E+LQ+ ++P+ T+F  +I  FC     
Sbjct: 616 KGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDF 675

Query: 342 EKALQFHNKMVEKSFKPDIVTCN---ILLSGLCRE----GILEKALKFFRSWILKGKAVD 394
             A        ++ F   + TC    +L S +C +    G   +A+    + +    ++ 
Sbjct: 676 SAA--------QRVFDASLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIH 727

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
              Y  +I  LCK   ++    LL  +  K    D   +  +  AL E G+ +     + 
Sbjct: 728 RFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQ 787

Query: 455 IMVETGKINHQVVQPNTSKTP 475
            M+E  + ++ +  P+    P
Sbjct: 788 KMMEMAERDNGLAAPSGEFKP 808


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 240/448 (53%), Gaps = 2/448 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +    ++   F    +++   ++  ++K G  P+   YN ++SG+CK   ++ A  V
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFF 126
           +D M +    PDV T+N++I  +C  G ++ A ++ +E+ +     P ++TY  LI  + 
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G   EA KL+DE+   G++P+  T+N++ +  CKEGK+D+A + VR +   G  PD +
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN L+ A    G  +E  + M  +  +G + N +T + ++ +LC + K++E+  L+   
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++G   D   Y  LI  + R+ K + A++  D M     +P    YN ++  L ++G  
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A+++  +L + G  P+ +++NT++    S G   +AL   ++M+ K   PD++T N L
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSL 366

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +S LCR+G++++A+      +      + V+Y T++  LCK  R++DA  +L+ M E   
Sbjct: 367 ISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGC 426

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTS 454
            P+  TY  +   +  SG   +A +  +
Sbjct: 427 QPNETTYTLLIEGIGFSGSRTQAMELAN 454



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 224/429 (52%), Gaps = 8/429 (1%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+      L+ G+     + +A RV+ ++ ++   PDV+ YN +I+G+C A  +E A  +
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKTV 66

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYC 161
              M+     PDVVT+N +I  F   G+   A K+ +EL  ++  KP  +T+ I+I+ Y 
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
            EG ID+A K++  M   G  PD  TYN +    CK G ++ AF  +  +  +G K + I
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +L  L  + K DE    ++    RG   + V+Y  LI+   RD K   ++ L   M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           KE+ + P  + Y+ +I    + GK + AI+ L+ ++  G +PD   +NTI+   C  G  
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           + A++   K+ E    P++ + N +LS L   G   +AL      + KG   D +TYN+L
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSL 366

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           IS LC++  +++A GLL++M   +  P+  +Y  +   L ++ R+++A +  + M+E G 
Sbjct: 367 ISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG- 425

Query: 462 INHQVVQPN 470
                 QPN
Sbjct: 426 -----CQPN 429



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 234/451 (51%), Gaps = 19/451 (4%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           PDV     LI G+ N+  +++A R+   +E     PDV  YN +I+ F ++ R   A  +
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKTV 66

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLIDANC 196
           +D +   G  P+ VTHNIMI  +C +GKID A K+   + ++N   P  +TY  LI+A  
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
             G ++EA +++D M  +GL+ +T T N I   LC E K+D A+  + + + RG   D +
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  L+       K +   K   E+  R   P+  TY+ +I  L + GK E++++++  +
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            + G+ PD   ++ +I  FC EG+++ A++F + M+   F PDIV  N +++ LC+ G  
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A++ F      G   +  +YNT++S+L        A G++S+M  K + PD  TY ++
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSL 366

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
            + L   G ++EA    + M+ +G+      QPN            +SY   +   C   
Sbjct: 367 ISCLCRDGMVDEAIGLLADML-SGRF-----QPNI-----------VSYKTVLLGLCKAH 409

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           R  DA+++     + G   N++TY  L+ G+
Sbjct: 410 RIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 201/393 (51%), Gaps = 2/393 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G  PD VT+N ++     KGK++    +  ++ K     P   TY IL+  Y   G + E
Sbjct: 74  GFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDE 133

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++D M      PD +TYN++  G C  G ++ AF   + + S    PDV+TYN L+ 
Sbjct: 134 ALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLR 193

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G+  E  K + E+   G +PN VT++I+I   C++GKI+++  +V+ M+E G +P
Sbjct: 194 ALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTP 253

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D   Y+ LI A C+ G ++ A   +D M   G   + +  NTI+  LC     D A  + 
Sbjct: 254 DAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIF 313

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   +  SY T+++  +      RAL +  +M  + I P   TYN++I  L + 
Sbjct: 314 GKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRD 373

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++AI +L ++L     P+  ++ T++ G C   +++ A++    M+E   +P+  T 
Sbjct: 374 GMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTY 433

Query: 364 NILLSGLCREGILEKALKFFRS-WILKGKAVDS 395
            +L+ G+   G   +A++   S +I+   + DS
Sbjct: 434 TLLIEGIGFSGSRTQAMELANSLYIMNAISEDS 466



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 199/421 (47%), Gaps = 19/421 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PDV+    LI  FF S    +A +++  L++HG KP+   +N +I  +CK  +I+ A  +
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD-VMGRKGLKMNTITLNTILHTLC 231
           +  M+  GFSPD VT+N +I   C  G ++ A ++ + ++     K   IT   ++    
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
            E  +DEA  LL+    RG   D  +Y  +  G  ++ K +RA +    +  R   P   
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TYN ++  L   GK ++    ++E+   G  P+  T++ +I   C +G++E+++     M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            EK   PD    + L++  CREG L+ A++F    I  G   D V YNT++++LCK    
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           + A  +  +++E    P+  +Y  + +AL  SG    A    S M+  G           
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG----------- 355

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 IDP  I+Y+  I+  C  G   +A+ +  +        N  +Y  ++ GL K  
Sbjct: 356 ------IDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAH 409

Query: 532 K 532
           +
Sbjct: 410 R 410



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 179/353 (50%), Gaps = 19/353 (5%)

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M    + PD +    LI     + N+++A R+M ++ + G K +    N ++   C   +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE-MKERQIMPSTFTYN 294
           ++ A  +L+   ++G+  D V++  +I  +    K + ALK+++E +K+    P+  TY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I      G  ++A+ +L+E+L  G+ PD  T+N I  G C EG+V++A +F   +  +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KPD++T NILL  L  +G  ++  K+      +G   + VTY+ LISSLC++ ++E++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L+  M+EK L PD Y Y  +  A    G+L+ A +F   M+  G +            
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFL------------ 287

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                P  ++Y+  +   C  G    A++IF +  + G   N S+Y  +++ L
Sbjct: 288 -----PDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 140/285 (49%), Gaps = 19/285 (6%)

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           + Y  D +    LI G+F     ++A ++   + E+   P  F YNA+I G  ++ + E 
Sbjct: 4   KDYQPDVILCTKLIKGFFNSRNIDKATRVMGIL-EKHGKPDVFAYNAVISGFCKANRIES 62

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ-FHNKMVEKSFKPDIVTCNILL 367
           A  +L+ + + G  PD  T N +I  FC +G+++ AL+ F   + + + KP ++T  IL+
Sbjct: 63  AKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILI 122

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                EG +++ALK     + +G   D+ TYN +   LCKE +++ AF  +  +  +   
Sbjct: 123 EAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCK 182

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +  AL+  G+ +E +K+ S +   G                  +P+ ++YS 
Sbjct: 183 PDVITYNILLRALLNQGKWDEGEKWMSEIFSRG-----------------CEPNVVTYSI 225

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            I+  C  G+ ++++ + +  ++KG+  +   Y  L+    +  K
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGK 270



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 17/182 (9%)

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           MV K ++PD++ C  L+ G      ++KA +        GK  D   YN +IS  CK  R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKP-DVFAYNAVISGFCKANR 59

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +E A  +L  M+ K   PD  T+  +       G+++ A           K+  ++++ N
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLAL----------KVFEELLKDN 109

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             K      P+ I+Y+  I  +  +G   +AL++ +E   +G+  +  TY  +  GL K 
Sbjct: 110 NCK------PTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKE 163

Query: 531 RK 532
            K
Sbjct: 164 GK 165


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 249/524 (47%), Gaps = 29/524 (5%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN ++ +L ++  L      LS M + G  P+  T+N L+ GYC+   +  A  + D M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                  DV +Y  LI G+C  G ++EA  L  EM+     PD+  Y  L+    ++GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            E   ++  + E G +P+   +  ++ + C E K  +A ++++ M E G +P  VT   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I+A CK G M +A R++++M  +G K N  T N ++   C E K+ +A  LLN     G 
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V+Y  LI G   D     A +L   M+   ++   +TYNA+I  L + G+T+QA  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + L   G+ P+  TFN++I+G C  G+V+ A +F  KMV     PD  T +  +  LC
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS----EMEEKKLG 427
           +    ++ L F    + K     +V Y  +I  L KER     +GL++    EM      
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN----YGLVARTWGEMVSSGCN 424

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY     A    GRL EA+     M + G                 +   +++Y+ 
Sbjct: 425 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG-----------------VTVDTMAYNT 467

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            ++ H S G+   A+ I ++        N+ TY  L+  L++ R
Sbjct: 468 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 511



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 254/569 (44%), Gaps = 39/569 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+N+++    +  +++  RDL   M  +G   +  +Y  L+ G+C+ G + EA
Sbjct: 41  GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEA 100

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-------------- 110
           + +   M Q    PD+  Y  L+ G C AG  EE   + + M+ L               
Sbjct: 101 VELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDF 156

Query: 111 ---------------------LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                                L P VVT   +IN + + GR  +A ++++ +   G KPN
Sbjct: 157 RCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 216

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+N +++ +C EGK+ KA  ++  M   G +PD VTYN LI   C  G++E AFR++ 
Sbjct: 217 VWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 276

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           +M   GL  +  T N +++ LC + + D+A  L +S   RG   + V++ +LI G  +  
Sbjct: 277 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 336

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K + A K  ++M      P T+TY++ I  L +   +++ +  + E+LQ  + P    + 
Sbjct: 337 KVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 396

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +IH    E       +   +MV     PD+VT    +   C EG L +A          
Sbjct: 397 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 456

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G  VD++ YNTL+       + + A  +L +M      P+++TY  +   LV    +E+ 
Sbjct: 457 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 516

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
              T   V        V          E  P+S +YS  +      GR ++A  +    +
Sbjct: 517 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 576

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +  I++N+  Y  L+    K ++ +   V
Sbjct: 577 EDSISLNEDIYTALVTCFCKSKRYLDAWV 605



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 246/528 (46%), Gaps = 35/528 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P    Y  ++D    + K  E  ++L +M ++GL P   T   +++ YCK G 
Sbjct: 138 MKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 197

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+RV++LM      P+VWTYN L+ G+CN G + +A  L  +M    + PD VTYN 
Sbjct: 198 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNL 257

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G    AF+L+  ++  G+  +  T+N +I   CK+G+ D+AC +  ++E  G
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+N+LI+  CK+G ++ A++ ++ M   G   +T T ++ +  LC  K   E  
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    ++      V+Y  +I    ++       + W EM      P   TY   +   
Sbjct: 378 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 437

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+  +A ++L E+ ++G+  D   +NT++ G  S GQ + A+    +M   +  P+ 
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  ILL  L R  ++E  L    + +   KA++                L D FGL   
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVW--KAIE----------------LTDVFGLFDV 539

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M++ +  P+  TY++I     E GR EEA    S+M E                 + I  
Sbjct: 540 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE-----------------DSISL 582

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           +   Y+  +   C   RY DA  +     Q G   +  +Y +L++GLI
Sbjct: 583 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLI 630



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 242/526 (46%), Gaps = 55/526 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VT   +++A  K+G++++   +L  MK +G  PN  TYN LV G+C  G + +A
Sbjct: 177 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 236

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +++ M      PD  TYN+LI G C  G +E AFRL + ME   L+ D  TYN LIN 
Sbjct: 237 MALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 296

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR+ +A  L D L+  GIKPNAVT N +I   CK GK+D A K +  M   G +PD
Sbjct: 297 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPD 356

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-------------- 230
             TY++ I+  CK    +E    +  M +K +K +T+    ++H L              
Sbjct: 357 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWG 416

Query: 231 ---------------------CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                                C E +L+EA  +L   SK G  +D ++Y TL+ G+    
Sbjct: 417 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 476

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMI-----------------WGLSQSGKTEQAIDM 312
           + + A+ +  +M     +P+ FTY  ++                  G+ ++ +      +
Sbjct: 477 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 536

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + + ++  +P+  T+++I+ GF  +G+ E+A    + M E S   +      L++  C+
Sbjct: 537 FDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 596

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
                 A     S I  G     ++Y  L+S L  E + + A  +      K   PD   
Sbjct: 597 SKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 656

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVE--TGKINHQVVQPNTSKTPE 476
           +  I   L++ G  + +++   IM+E    + +HQ     T + P+
Sbjct: 657 WKVIIDGLIKKGHSDISREMI-IMLERMNCRPSHQTYAMLTEELPD 701



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 21/346 (6%)

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN +I + C+  ++  A R + +M R G + +  T N+++   C   ++D A  L +  
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             RG+  D VSY  LI G+    + + A++L+ EM +    P    Y A++ GL ++G+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+ + ML  + + G  P    +  ++   C E + ++A +   +M EK   P +VTC  +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           ++  C+EG +  AL+      L+G   +  TYN L+   C E ++  A  LL++M    +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY  +       G +E A +   +M   G I  Q                  +Y+
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY-----------------TYN 291

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             IN  C  GR   A  +F+    +GI  N  T+ +L+NGL K  K
Sbjct: 292 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 337


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 237/434 (54%), Gaps = 5/434 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM---KKQGLVPNRTTYNILVSGYCKLGW 60
           F C     ++N++L+ + ++G  +   +  + +   K   + PN  T+N+++   CK+G 
Sbjct: 155 FECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGL 214

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A++V   MT  K  PDV+TY  L++G C A  ++EA  L  EM+     P  VT+N 
Sbjct: 215 VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 274

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G    A KL+D +   G  PN VT+N +I   C +GK++KA  ++  M  + 
Sbjct: 275 LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 334

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY T+I+   K G   +   ++ +M  +G  +N    +T++  L  E K  EA 
Sbjct: 335 CVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAM 394

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    + +GY L+ + Y  +I G  RD K + A+++  EM  +   P+ +T ++++ G 
Sbjct: 395 HLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGF 454

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G + +A+++  ++ +     +E  ++ +IHG C +G+V++A+    +M+ K  KPD+
Sbjct: 455 FEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDV 514

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKG--KAVDSVTYNTLISSLCKERRLEDAFGLL 418
           V  + +++GL   G++E A++ +   + +G     D VTYN L+++LCK+  +  A  LL
Sbjct: 515 VAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLL 574

Query: 419 SEMEEKKLGPDRYT 432
           + M ++   PD  T
Sbjct: 575 NSMLDRGCDPDLVT 588



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 247/480 (51%), Gaps = 26/480 (5%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G    P+ +T+N ++ A+ K G +++   +  DM  +   P+  TY  L+ G CK   +
Sbjct: 191 KGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRI 250

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            EA+ ++D M  +   P   T+N+LING C  G L  A +L   M     +P+ VTYNTL
Sbjct: 251 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTL 310

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-IDKACKIVRNMEENG 180
           I+     G+  +A  L+D +      PN VT+  +I    K+G+ +D AC ++  MEE G
Sbjct: 311 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGAC-VLALMEERG 369

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  +   Y+TLI    K G  +EA  +   M  KG ++NTI  + ++  LC + K D+A 
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+  + +G   +  +  +L+ G+F    ++RA+++W +M +     +   Y+ +I GL
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGL 489

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS--FKP 358
            + GK ++A+ +  ++L  G  PD   ++++I+G    G VE A+Q +N+M+ +    +P
Sbjct: 490 CKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQP 549

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT--------------------- 397
           D+VT NILL+ LC++  + +A+    S + +G   D VT                     
Sbjct: 550 DVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREF 609

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIM 456
            + L+  L K +R+  A  ++  M +K L P   T+A +   L +  +++   QK  SI+
Sbjct: 610 LDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCWSIL 669



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 189/420 (45%), Gaps = 42/420 (10%)

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--EENG 180
           ++ F+SG  M +++L D            T   +I  Y   G      K++  M  E+  
Sbjct: 74  DKIFKSGPKMGSYRLGDS-----------TFYSLINNYANLGDFKSLEKVLDRMKCEKRV 122

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG------RKGLKMNTITLNTILHTLCCEK 234
               C  +  +  A  KA   E+A  + D M       R G   N++ LN I+      +
Sbjct: 123 IFEKC--FIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSV-LNVIIQEGLFHR 179

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            L E Y  +  A       + +++  +I    +    + A++++ +M  R+  P  +TY 
Sbjct: 180 AL-EFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYC 238

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ GL ++ + ++A+ +L+E+   G  P   TFN +I+G C +G + +A +  + M  K
Sbjct: 239 TLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLK 298

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P+ VT N L+ GLC +G LEKA+      +      + VTY T+I+ L K+ R  D 
Sbjct: 299 GCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDG 358

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSK 473
             +L+ MEE+    + Y Y+ + + L + G+ +EA   F  + V+  ++N          
Sbjct: 359 ACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELN---------- 408

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                   +I YS  I+  C  G+  DA+++  E   KG   N  T  +LM G  +   S
Sbjct: 409 --------TIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNS 460



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 36/308 (11%)

Query: 242 LLNSASKRGYY-LDEVSYGTLITGYFRDEKANRALKLWDEMK--ERQIMPSTFTYNAMIW 298
           +  S  K G Y L + ++ +LI  Y          K+ D MK  +R I    F      +
Sbjct: 76  IFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAY 135

Query: 299 GLSQSGKTEQAIDMLN------ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           G  ++   E+A+D+ +      E  ++G      +FN++++    EG   +AL+F+N ++
Sbjct: 136 G--KAHLPEKAVDLFDRMACEFECKRTG-----KSFNSVLNVIIQEGLFHRALEFYNHVI 188

Query: 353 EK---SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
                S  P+++T N+++  +C+ G+++ A++ FR   ++    D  TY TL+  LCK  
Sbjct: 189 GAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKAD 248

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+++A  LL EM+     P   T+  +   L + G L  A K    M   G I       
Sbjct: 249 RIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCI------- 301

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     P+ ++Y+  I+  C +G+ + A+ + +         N  TY  ++NGL+K
Sbjct: 302 ----------PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVK 351

Query: 530 RRKSISKA 537
           + +++  A
Sbjct: 352 QGRALDGA 359



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 16/312 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   +   Y+T++  LFK+GK  E   L  +M  +G   N   Y+ ++ G C+ G 
Sbjct: 365 MEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGK 424

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ V+  MT     P+ +T + L+ G+  AG    A  + K+M       + V Y+ 
Sbjct: 425 PDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSV 484

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+  EA  +  ++   G KP+ V ++ MI      G ++ A ++   M   G
Sbjct: 485 LIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQG 544

Query: 181 --FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD VTYN L++  CK  ++  A  +++ M  +G   + +T    L  L   +KLD 
Sbjct: 545 PDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML--REKLD- 601

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                        +LDE     L+    + ++   A K+ + M ++ + P   T+  ++ 
Sbjct: 602 ------PPQDGREFLDE-----LVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVE 650

Query: 299 GLSQSGKTEQAI 310
            L +  K +  I
Sbjct: 651 NLCKPKKVQAVI 662


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 269/540 (49%), Gaps = 14/540 (2%)

Query: 4   FGCLP--DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           F  +P  + V+Y  ++  L + GKL+E  +  + M++ G  P   TY +LV   C+ G  
Sbjct: 247 FCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRE 306

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            EA+ +   M +    P+V+TY +LI+  C  G ++EA ++  EM    + P VV +N L
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  + + G   +A  ++  ++   + PN  T+N +I  +C+   +D+A  ++  M E+  
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKL 426

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SPD VTYNTLI   C+ G ++ A R+  +M R G   +  T N  +  LC   ++ EA+ 
Sbjct: 427 SPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQ 486

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L S  ++    +E +Y  LI GY +  K   A  L+  M   + +P++ T+N MI GL 
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLR 546

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + GK + A+ ++ ++ +  + P   T+N ++     E   ++A +  N+++   ++P++V
Sbjct: 547 KEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVV 606

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T    +   C +G LE+A +       +G  +DS  YN LI++      L+ AFG+L  M
Sbjct: 607 TYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRM 666

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQ-------KFTSIMVETGKINHQVVQPNTSKT 474
                 P   TY+ +   LV     +E           T+I V+   I  ++    T+  
Sbjct: 667 FGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVL 726

Query: 475 PEEID-----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            E++      P+  +YS+ IN  C  GR   A  ++   R+ GI+ ++  + +L++   K
Sbjct: 727 FEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCK 786



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/574 (27%), Positives = 260/574 (45%), Gaps = 51/574 (8%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G    P+ +T NT+L++  K G +   R     + +    P+  TY  LV GYC+   ++
Sbjct: 182 GNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVE 241

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A  V  +M +  ++    +Y  LI+G C AG L EA      M      P V TY  L+
Sbjct: 242 RACGVFCVMPRRNAV----SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLV 297

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
               ESGR +EA  L  E+ E G +PN  T+ ++I + CKEG++D+A K++  M E G +
Sbjct: 298 CALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVA 357

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--------------------------- 215
           P  V +N LI + CK G ME+A  ++ +M  K                            
Sbjct: 358 PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMAL 417

Query: 216 --------LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
                   L  + +T NT++H LC    +D A  L     + G+  D+ ++   +    R
Sbjct: 418 LNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR 477

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             +   A ++ + +KE+ +  +   Y A+I G  ++GK E A  +   +L    +P+  T
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           FN +I G   EG+V+ A+     M +   KP + T NIL+  + +E   ++A +     I
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   + VTY   I + C + RLE+A  ++ +++ + +  D + Y  +  A    G L+
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLD 657

Query: 448 EAQKFTSIMVETG----------KINHQVVQPNTSK--TPEEIDPSSISYSEKINEHCSQ 495
            A      M  TG           + H V++ +  +   P  +D S  + S    +  S+
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSK 717

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             +     +FE+  + G   N +TY  L+NGL K
Sbjct: 718 IDFGITTVLFEKMAECGCVPNLNTYSKLINGLCK 751



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 220/456 (48%), Gaps = 31/456 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYNT++  L + G ++    L   M + G  P++ T+N  +   C++G + EA ++
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQI 487

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ + +     +   Y  LI+G+C AG +E A  L K M + + LP+ +T+N +I+   +
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L++++ +  +KP   T+NI+++   KE   D+A +I+  +  +G+ P+ VT
Sbjct: 548 EGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVT 607

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y   I A C  G +EEA  M+  +  +G+ +++   N +++   C   LD A+ +L    
Sbjct: 608 YTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF 667

Query: 248 KRGYYLDEVSYGTLITGYF----RDEKANRA-------------------------LKLW 278
             G     ++Y  L+        + E +N                             L+
Sbjct: 668 GTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLF 727

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           ++M E   +P+  TY+ +I GL + G+   A  + + + + G+ P E   N+++   C  
Sbjct: 728 EKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKL 787

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G   +A+   + M+E S    + +  +L+ GL  +   EKA   F S +  G   D V +
Sbjct: 788 GMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAW 847

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEK--KLGPDRYT 432
             LI  L K   ++    LL+ ME+   +L P+ Y+
Sbjct: 848 KVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYS 883



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 229/555 (41%), Gaps = 99/555 (17%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TY  ++D L K+G+++E   +L++M ++G+ P+   +N L+  YCK G +++A
Sbjct: 320 GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDA 379

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN- 123
           + V+ LM   K  P+V TYN LI G+C    ++ A  L  +M   KL PDVVTYNTLI+ 
Sbjct: 380 VGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHG 439

Query: 124 -----------RFFE-----------------------SGRSMEAFKLIDELDEHGIKPN 149
                      R F                         GR  EA ++++ L E  +K N
Sbjct: 440 LCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKAN 499

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
              +  +I  YCK GKI+ A  + + M      P+ +T+N +ID   K G +++A  +++
Sbjct: 500 EHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVE 559

Query: 210 VMGR-----------------------------------KGLKMNTITLNTILHTLCCEK 234
            M +                                    G + N +T    +   C + 
Sbjct: 560 DMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQG 619

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +L+EA  ++      G  LD   Y  LI  Y      + A  +   M      PS  TY+
Sbjct: 620 RLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYS 679

Query: 295 AMIWGL-----SQSGKTEQAID------------------------MLNELLQSGMIPDE 325
            ++  L      + G     +D                        +  ++ + G +P+ 
Sbjct: 680 ILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNL 739

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T++ +I+G C  G++  A   ++ M E    P  +  N LLS  C+ G+  +A+    S
Sbjct: 740 NTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDS 799

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +         +Y  LI  L ++   E A  +   +       D   +  +   L ++G 
Sbjct: 800 MMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGY 859

Query: 446 LEEAQKFTSIMVETG 460
           +++  +  ++M + G
Sbjct: 860 VDQCSELLNLMEKNG 874



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 204/454 (44%), Gaps = 59/454 (12%)

Query: 114 DVVTYNTLI---NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
            + +YN L+   +RF      +  +K +   + + + PN +T N M+  YCK G +  A 
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
                +      PD  TY +L+   C+  ++E A  +  VM R+    N ++   ++H L
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGL 265

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   KL EA        + G +    +Y  L+       +   AL L+ EM+ER   P+ 
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE-------- 342
           +TY  +I  L + G+ ++A+ MLNE+++ G+ P    FN +I  +C  G +E        
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385

Query: 343 ---------------------------KALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
                                      +A+   NKMVE    PD+VT N L+ GLC  G+
Sbjct: 386 MESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGV 445

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           ++ A + FR  I  G + D  T+N  +  LC+  R+ +A  +L  ++EK +  + + Y A
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTA 505

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +     ++G++E A      M+                  EE  P+SI+++  I+    +
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLA-----------------EECLPNSITFNVMIDGLRKE 548

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           G+ +DA+ + E+  +  +     TY  L+  ++K
Sbjct: 549 GKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLK 582



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 184/397 (46%), Gaps = 24/397 (6%)

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFS--PDCVTYNTLIDAN 195
           D   +   K +  ++N ++    +   +D+   + + M  +NG S  P+ +T NT++++ 
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK GNM  A      + R     +  T  +++   C    ++ A  +     +R    + 
Sbjct: 200 CKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NA 255

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           VSY  LI G     K + AL+ W  M+E    P+  TY  ++  L +SG+  +A+ +  E
Sbjct: 256 VSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE 315

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + + G  P+  T+  +I   C EG++++AL+  N+MVEK   P +V  N L+   C+ G+
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +E A+        K    +  TYN LI   C+ + ++ A  LL++M E KL PD  TY  
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNT 435

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L E G ++ A +   +M+  G                   P   +++  +   C  
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDG-----------------FSPDQWTFNAFMVCLCRM 478

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           GR  +A QI E  ++K +  N+  Y  L++G  K  K
Sbjct: 479 GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGK 515



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 164/357 (45%), Gaps = 29/357 (8%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           CLP+++T+N ++D L K+GK+ +   L+ DM K  + P   TYNILV    K      A 
Sbjct: 531 CLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRAN 590

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +++ +  +   P+V TY   I  +C+ G LEEA  +  ++++  +L D   YN LIN +
Sbjct: 591 EILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAY 650

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC-----KEG---------------- 164
              G    AF ++  +   G +P+ +T++I++K        KEG                
Sbjct: 651 GCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD 710

Query: 165 ------KIDKACKIV--RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
                 KID     V    M E G  P+  TY+ LI+  CK G +  AF +   M   G+
Sbjct: 711 NTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGI 770

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             + I  N++L + C      EA  LL+S  +  +     SY  LI G F      +A  
Sbjct: 771 SPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEA 830

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           ++  +           +  +I GL+++G  +Q  ++LN + ++G      T++ ++ 
Sbjct: 831 VFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 52/303 (17%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ---SGMIPDET 326
           + N A    D   +     S  +YN ++  LS+    ++ I +  E+L    + + P+  
Sbjct: 131 RMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLI 190

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT-----------------CNI---- 365
           T NT+++ +C  G +  A  F  +++     PD+ T                 C +    
Sbjct: 191 TLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM 250

Query: 366 ----------LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
                     L+ GLC  G L +AL+F+      G      TY  L+ +LC+  R  +A 
Sbjct: 251 PRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEAL 310

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            L  EM E+   P+ YTY  +   L + GR++EA K  + MVE G               
Sbjct: 311 SLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG--------------- 355

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             + PS + ++  I  +C +G  +DA+ +      K +  N  TY  L+ G   R KS+ 
Sbjct: 356 --VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFC-RGKSMD 412

Query: 536 KAV 538
           +A+
Sbjct: 413 RAM 415



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 35/296 (11%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY   + A   +G+L E  +++  +K +G++ +   YN+L++ Y  +G L  A  V
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGV 662

Query: 68  VDLMTQNKSLPDVWTYNMLINGWC---------NAGMLEEAFR----------------- 101
           +  M      P   TY++L+             N   L+ +                   
Sbjct: 663 LRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGI 722

Query: 102 ---LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
              L ++M     +P++ TY+ LIN   + GR   AF L   + E GI P+ + HN ++ 
Sbjct: 723 TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLS 782

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
             CK G   +A  ++ +M E        +Y  LI    +  N E+A  +   + R G   
Sbjct: 783 SCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNY 842

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           + +    ++  L     +D+   LLN   K G  L   +Y  L+      ++ NRA
Sbjct: 843 DEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM------QELNRA 892



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 29/255 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D+  YN +++A    G L+    +L  M   G  P+  TY+IL+         KE 
Sbjct: 635 GVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEG 694

Query: 65  MRVVDL-----------------------------MTQNKSLPDVWTYNMLINGWCNAGM 95
              V L                             M +   +P++ TY+ LING C  G 
Sbjct: 695 SNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGR 754

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L  AF L   M    + P  + +N+L++   + G   EA  L+D + E     +  ++ +
Sbjct: 755 LNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKL 814

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I    ++   +KA  +  ++   G++ D V +  LID   K G +++   ++++M + G
Sbjct: 815 LICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNG 874

Query: 216 LKMNTITLNTILHTL 230
            +++  T + ++  L
Sbjct: 875 CRLHPETYSMLMQEL 889



 Score = 45.4 bits (106), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 30/265 (11%)

Query: 274 ALKLWDEMKERQIMPSTF-TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           AL  +  ++     P +  T+++++  L +      A ++ N +++S   P + TF   +
Sbjct: 69  ALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATF---L 125

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL-KGK 391
                      A   H   +  +FK  + + N LL  L R  ++++ +  ++  +   G 
Sbjct: 126 LNLLRRMNTAAAAADHQHQL--AFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGN 183

Query: 392 AV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           +V  + +T NT+++S CK   +  A      +   + GPD +TY ++      +  +E A
Sbjct: 184 SVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERA 243

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                +M                  P     +++SY+  I+  C  G+  +AL+ +   R
Sbjct: 244 CGVFCVM------------------PRR---NAVSYTNLIHGLCEAGKLHEALEFWARMR 282

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSI 534
           + G      TY  L+  L +  + +
Sbjct: 283 EDGCFPTVRTYTVLVCALCESGREL 307


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 248/528 (46%), Gaps = 29/528 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TYN ++ +L ++  L      LS M + G  P+  T+N L+ GYC+   +  A  +
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M       DV +Y  LI G C AG ++EA  L  EM+     PD+  Y  L+     
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCN 266

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  E   ++  + E G +P+   +  ++ + C+E K  +A ++++ M E G +P  VT
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
              +I+A CK G M +A R++++M  +G K N  T N ++   C E K+ +A  LLN   
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D V+Y  LI G   D     A +L   M+   ++   +TYNA+I  L + G+T+
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA  + + L   G+ P+  TFN++I+G C  G+ + A +F  KMV     PD  T +  +
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS----EMEE 423
             LC+    ++ L F    + K     +V Y  +I  L KER     +GL++    EM  
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN----YGLVARTWGEMVS 562

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               PD  TY     A    GRL EA+     M + G                 +   ++
Sbjct: 563 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG-----------------VTVDTM 605

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +Y+  ++ H S G+   A+ I ++        N+ TY  L+  L++ R
Sbjct: 606 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 248/528 (46%), Gaps = 35/528 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P    Y  ++D   ++ K  E  ++L +M ++GL P   T   +++ YCK G 
Sbjct: 280 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 339

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+RV++LM      P+VWTYN L+ G+CN G + +A  L  +M +  + PD VTYN 
Sbjct: 340 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G    AF+L+  ++  G+  +  T+N +I   CK+G+ D+AC +  ++E  G
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+N+LI+  CK+G  + A++ ++ M   G   +T T ++ +  LC  K   E  
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    ++      V+Y  +I    ++       + W EM      P   TY   +   
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 579

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+  +A ++L E+ ++G+  D   +NT++ G  S GQ + A+    +M   +  P+ 
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  ILL  L R  ++E  L    + +   KA++                L D FGL   
Sbjct: 640 FTYFILLRHLVRMRLVEDVLPLTPAGVW--KAIE----------------LTDVFGLFDV 681

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M++ +  P+  TY++I     E GR EEA    S+M E           ++    E+I  
Sbjct: 682 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE-----------DSISLNEDI-- 728

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
               Y+  +   C   RY DA  +     Q G      +Y +L++GLI
Sbjct: 729 ----YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLI 772



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 255/569 (44%), Gaps = 39/569 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+N+++    +  +++  RDL   M  +G   +  +Y  L+ G C+ G + EA
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 242

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA------------------------F 100
           + +   M Q    PD+  Y  L+ G CNA   EE                         F
Sbjct: 243 VELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 298

Query: 101 RLR-----------KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           R R           +EM    L P VVT   +IN + + GR  +A ++++ +   G KPN
Sbjct: 299 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 358

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+N +++ +C EGK+ KA  ++  M   G +PD VTYN LI   C  G++E AFR++ 
Sbjct: 359 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 418

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           +M   GL  +  T N +++ LC + + D+A  L +S   RG   + V++ +LI G  +  
Sbjct: 419 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 478

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           KA+ A K  ++M      P T+TY++ I  L +   +++ +  + E+LQ  + P    + 
Sbjct: 479 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 538

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +IH    E       +   +MV     PD+VT    +   C EG L +A          
Sbjct: 539 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 598

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G  VD++ YNTL+       + + A  +L +M      P+++TY  +   LV    +E+ 
Sbjct: 599 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 658

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
              T   V        V          E  P+S +YS  +      GR ++A  +    +
Sbjct: 659 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 718

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +  I++N+  Y  L+    K ++ +   V
Sbjct: 719 EDSISLNEDIYTALVTCFCKSKRYLDAWV 747



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 235/519 (45%), Gaps = 87/519 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VT   +++A  K+G++++   +L  MK +G  PN  TYN LV G+C  G + +A
Sbjct: 319 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 378

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +++ M      PD  TYN+LI G C  G +E AFRL + ME   L+ D  TYN LIN 
Sbjct: 379 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 438

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR+ +A  L D L+  GIKPNAVT N +I   CK GK D A K +  M   G +PD
Sbjct: 439 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 498

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-------------- 230
             TY++ I+  CK    +E    +  M +K +K +T+    ++H L              
Sbjct: 499 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWG 558

Query: 231 ---------------------CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                                C E +L+EA  +L   SK G  +D ++Y TL+ G+    
Sbjct: 559 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 618

Query: 270 KANRALK----------------------------------------------------L 277
           + + A+                                                     L
Sbjct: 619 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 678

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           +D MK+ + +P++ TY++++ G S+ G+TE+A  +++ + +  +  +E  +  ++  FC 
Sbjct: 679 FDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 738

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
             +   A      M++  F P +++   LLSGL  EG  +KA + F +   K  + D + 
Sbjct: 739 SKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 798

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +  +I  L K+   + +  ++  +E     P   TYA +
Sbjct: 799 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 837



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 21/352 (5%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P   TYN +I + C+  ++  A R + +M R G + +  T N+++   C   ++D A  
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +    RG+  D VSY TLI G     + + A++L+ EM +    P    Y A++ GL 
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 265

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            + + E+ + ML  + + G  P    +  ++   C E + ++A +   +M EK   P +V
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           TC  +++  C+EG +  AL+      L+G   +  TYN L+   C E ++  A  LL++M
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
               + PD  TY  +       G +E A +   +M   G I  Q                
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY--------------- 430

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             +Y+  IN  C  GR   A  +F+    +GI  N  T+ +L+NGL K  K+
Sbjct: 431 --TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 22/271 (8%)

Query: 258 YGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           + +L+    R   A  AL+L+  M +     P+  TYNA+I  L +     +A+  L+ +
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           ++SG  PD  TFN++I G+C   QV+ A    +KM  + F  D+V+   L+ GLC  G +
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           ++A++ F     +    D   Y  L+  LC   R E+   +L  M+E    P    YAA+
Sbjct: 240 DEAVELFG----EMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                   + +EA++    M E G                 + P  ++ +  IN +C +G
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKG-----------------LAPCVVTCTAVINAYCKEG 338

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           R  DAL++ E  + +G   N  TY  L+ G 
Sbjct: 339 RMSDALRVLELMKLRGCKPNVWTYNALVQGF 369


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 269/525 (51%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  + YN IL  L +KGK+ E   +  +M+ Q   PN TTYNIL+   CK G L+ A
Sbjct: 373 GCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAA 431

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V D M +    P++ T N++I+  C A  L+EA  +   ++     PD  T+ +LI+ 
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  +A+ L +++ +    PN V +  +I+ + K G+ +   KI + M   G SPD
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +  N+ +D   KAG +E+   + + +  +GL  +  + + ++H L       E Y L  
Sbjct: 552 LMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFY 611

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G +LD ++Y T+I G+ +  K ++A +L +EMK + + P+  TY +++ GL++  
Sbjct: 612 EMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKID 671

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     ++++K   P+  T N
Sbjct: 672 RLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWN 731

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   +++A   F++      + +++TY+ +I+ LC  R+   AF    EM+++
Sbjct: 732 CLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQ 791

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY  +   L ++G + EA+        +G +                 P S  
Sbjct: 792 GLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGV-----------------PDSAC 834

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    S  +  DA  +FEETR KG  +N  T + L++ L K
Sbjct: 835 YNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHK 879



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 252/563 (44%), Gaps = 51/563 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P    Y T++ AL    + + +  L   M++ G   N   +  LV  + + G 
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++D M  N    D+  YN+ I+ +   G ++ A++   EM++  L+PD VTY T
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++ R  EA +L +ELD +   P    +N MI  Y   GK D+A  ++   +  G
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373

Query: 181 ----------------------------------FSPDCVTYNTLIDANCKAGNMEEAFR 206
                                              +P+  TYN LID  CKAG +E A +
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALK 433

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           + D M   GL  N +T+N ++  LC  +KLDEA  +      +    D  ++ +LI G  
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R  + + A  L+++M +   +P+   Y ++I    + G+ E    +  E++  G  PD  
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLM 553

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
             N+ +      G+VEK      ++  +   PD+ + +IL+ GL + G   +  K F   
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             +G  +D + YNT+I   CK  +++ A+ LL EM+ K L P   TY ++   L +  RL
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +EA          G                 +D + + YS  I+     GR  +A  I E
Sbjct: 674 DEAYMLFEEAKSIG-----------------VDLNVVIYSSLIDGFGKVGRIDEAYLILE 716

Query: 507 ETRQKGIAINKSTYMNLMNGLIK 529
           E  QKG+  N  T+  L++ L+K
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVK 739



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 253/555 (45%), Gaps = 53/555 (9%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           + T++    ++G+++    LL +MK      +   YN+ +  + K+G +  A +    M 
Sbjct: 241 FTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMK 300

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
               +PD  TY  LI   C A  L+EA  L +E++  + +P V  YNT+I  +  +G+  
Sbjct: 301 AQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFD 360

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA+ L++     G  P+ + +N ++    ++GK+++A +I   M ++  +P+  TYN LI
Sbjct: 361 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILI 419

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  CKAG +E A ++ D M   GL  N +T+N ++  LC  +KLDEA  +      +   
Sbjct: 420 DMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCS 479

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  ++ +LI G  R  + + A  L+++M +   +P+   Y ++I    + G+ E    +
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
             E++  G  PD    N+ +      G+VEK      ++  +   PD+ + +IL+ GL +
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G   +  K F     +G  +D + YNT+I   CK  +++ A+ LL EM+ K L P   T
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y ++   L +  RL+EA          G                 +D + + YS  I+  
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIG-----------------VDLNVVIYSSLIDGF 702

Query: 493 CSQGRYKDALQIFEETRQKGI-----------------------------------AINK 517
              GR  +A  I EE  QKG+                                   + N 
Sbjct: 703 GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNA 762

Query: 518 STYMNLMNGLIKRRK 532
            TY  ++NGL   RK
Sbjct: 763 MTYSIMINGLCMIRK 777



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 237/536 (44%), Gaps = 19/536 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            YN  L  + +   L+ +  +L +M   G   +      LV+ + K   LKEA  V+++M
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y  LI     A   +    L  +M+ +    +V  + TL+  F   GR 
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+  +    + V +N+ I  + K GK+D A K    M+  G  PD VTY TL
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CKA  ++EA  + + +            NT++       K DEAY LL    ++G 
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               ++Y  ++T   R  K   AL++ DEM++    P+  TYN +I  L ++G+ E A+ 
Sbjct: 375 IPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALK 433

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + + ++G+ P+  T N +I   C   ++++A      +  K   PD  T   L+ GL 
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD-- 429
           R G ++ A   +   +   +  + V Y +LI +  K  R ED   +  EM  +   PD  
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLM 553

Query: 430 ---RYTYAAIHTALVESGR--LEE--AQKFTSIMVETGKINHQVVQPNTSKTP------- 475
               Y         VE GR   EE  AQ     +     + H +V+   S+         
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613

Query: 476 --EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + +    ++Y+  I+  C  G+   A Q+ EE + KG+     TY ++++GL K
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 52/309 (16%)

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           N  L  +   + LD    +L   S  G+ L       L+  + +  K   A  + + M++
Sbjct: 137 NAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRK 196

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
            +  P+   Y  +I  LS + + +  + + +++ + G   +   F T++  F  EG+++ 
Sbjct: 197 FKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDA 256

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL   ++M   SF  D+                                   V YN  I 
Sbjct: 257 ALSLLDEMKSNSFTADL-----------------------------------VLYNVCID 281

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
              K  +++ A+    EM+ + L PD  TY  +   L ++ RL+EA +    + E   +N
Sbjct: 282 CFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVE----LFEELDLN 337

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
             V             P   +Y+  I  + S G++ +A  + E  ++KG   +   Y  +
Sbjct: 338 RSV-------------PCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCI 384

Query: 524 MNGLIKRRK 532
           +  L ++ K
Sbjct: 385 LTCLGRKGK 393


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 250/523 (47%), Gaps = 19/523 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           C+PD    N++L+ L   GK+   R +  +M  + G V N T   I+  G CK G ++E 
Sbjct: 163 CVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVC-IVTKGLCKEGKVEEG 221

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++       +P++  YN LI+G+C  G +E A  L KE++    LP V TY  +IN 
Sbjct: 222 RHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINA 281

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+     KL+ E+ E G+  +    N +I    K G   +A   VR M E+G  PD
Sbjct: 282 FCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPD 341

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYNTLI+ +C  G + EA  +++   R+GL  N  +   ++H      +   A  LL 
Sbjct: 342 MATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLI 401

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+RG+ LD ++YG L+ G     + + AL + D+M ER I+P    YN ++ GL + G
Sbjct: 402 EMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKG 461

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A  +L E+L   + PD     T++ GF   G +++A +     +E+     +V CN
Sbjct: 462 RFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECN 521

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+ G++  AL  F+       + D  TY+T+I    K+  L  A  +   M +K
Sbjct: 522 AMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK 581

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  T+ ++      +G L  A+K    M   G                  +P+ ++
Sbjct: 582 TCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFG-----------------FEPNVVT 624

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I   C +G+   A   FE+        N +T+  L+NGL
Sbjct: 625 YTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 258/568 (45%), Gaps = 60/568 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++GF C       +++L  L +     E+ +LL  MK + L+P     + ++S Y   G 
Sbjct: 94  LDGFVC-------SSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGL 146

Query: 61  LKEAMRVVD-LMTQNKSLPDVWTYNMLIN------------------------------- 88
           +KEA+ + + ++  +  +PDV+  N L+N                               
Sbjct: 147 VKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVC 206

Query: 89  ----GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
               G C  G +EE   L ++      +P++V YNTLI+ + ++G    A  L  EL   
Sbjct: 207 IVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVK 266

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G  P   T+  MI  +CK+GK +   K++  M+E G +     +N +IDA  K G   EA
Sbjct: 267 GFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEA 326

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
              +  M   G + +  T NT+++  C + K+ EA  LL  A +RG + ++ SY  LI  
Sbjct: 327 ADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHA 386

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + ++ +  RA +L  EM ER        Y A++ GL  +G+ + A+ + +++++ G++PD
Sbjct: 387 FSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPD 446

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +N ++ G C +G+   A Q   +M++++  PD      L+ G  R G L++A K F+
Sbjct: 447 ANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQ 506

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             I +G     V  N +I   CK   + DA      M      PD +TY+ I    V+  
Sbjct: 507 LTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQN 566

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
            L  A +   +M++      +  +PN            ++++  IN  C  G    A ++
Sbjct: 567 DLRGALRMFGLMLK------KTCKPNV-----------VTFTSLINGFCRNGDLNRAEKV 609

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           FEE R  G   N  TY  L+    K  K
Sbjct: 610 FEEMRSFGFEPNVVTYTILIGYFCKEGK 637



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 153/560 (27%), Positives = 243/560 (43%), Gaps = 53/560 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           DN T   +   L K+GK+ E R L+     +G VPN   YN L+ GYCK G ++ A  + 
Sbjct: 201 DNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLF 260

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME------SLKLL---------- 112
             +     LP V TY  +IN +C  G  E   +L  EM+      SL++           
Sbjct: 261 KELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKH 320

Query: 113 -------------------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
                              PD+ TYNTLIN     G+  EA +L++     G+ PN  ++
Sbjct: 321 GCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSY 380

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
             +I  + K G+  +A +++  M E G + D + Y  L+     AG ++ A  + D M  
Sbjct: 381 TPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMME 440

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +G+  +    N ++  LC + +   A  LL     +    D     TL+ G+ R    + 
Sbjct: 441 RGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDE 500

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A KL+    ER I  S    NAMI G  + G    A+     +      PDE T++TII 
Sbjct: 501 AKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIID 560

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G+  +  +  AL+    M++K+ KP++VT   L++G CR G L +A K F      G   
Sbjct: 561 GYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEP 620

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           + VTY  LI   CKE +L  A     +M   K  P+  T+  +   L  +          
Sbjct: 621 NVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNN---------N 671

Query: 454 SIMVETGKINHQVVQPNTS------KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            I + + + N    QPN +         +  D    +Y+  +   C     K ALQ+ ++
Sbjct: 672 GIAISSKRSNS---QPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDK 728

Query: 508 TRQKGIAINKSTYMNLMNGL 527
              KG   +  +++ L++GL
Sbjct: 729 MMSKGFPPDPVSFIALLHGL 748



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 253/553 (45%), Gaps = 63/553 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP   TY  +++A  KKGK   V  LL +MK++GL  +   +N ++    K G   EA
Sbjct: 267 GFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEA 326

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              V  M ++   PD+ TYN LING C+ G + EA  L +      L P+  +Y  LI+ 
Sbjct: 327 ADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHA 386

Query: 125 FFESGRSMEAFKLI-----------------------------------DELDEHGIKPN 149
           F ++G  + A +L+                                   D++ E GI P+
Sbjct: 387 FSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPD 446

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           A  +N+++   CK+G+   A +++  M +   +PD     TL+D   + GN++EA ++  
Sbjct: 447 ANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQ 506

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           +   +G+  + +  N ++   C    +++A +         +  DE +Y T+I GY +  
Sbjct: 507 LTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQN 566

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               AL+++  M ++   P+  T+ ++I G  ++G   +A  +  E+   G  P+  T+ 
Sbjct: 567 DLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYT 626

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE-GILEKA--------- 379
            +I  FC EG++ KA  F  +M+     P+  T N L++GL    GI   +         
Sbjct: 627 ILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNL 686

Query: 380 -LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
            L+FF   I  G       YN+++  LC+ + ++ A  L  +M  K   PD  ++ A+  
Sbjct: 687 TLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLH 746

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L   GRL++               + V+  N ++   +I   ++ YSEK+++  S+G  
Sbjct: 747 GLCLEGRLQDW--------------NNVIPCNFNERQLQI---AVKYSEKLDQFLSEGLT 789

Query: 499 KDALQIFEETRQK 511
            DA  + +   +K
Sbjct: 790 SDASLLLQTLVEK 802



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 11/141 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG  P+ VTY  ++    K+GKL +       M     +PN  T+N LV+G      
Sbjct: 613 MRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNG 672

Query: 61  LKEAMRV------VDLMTQNKSLPDVW-----TYNMLINGWCNAGMLEEAFRLRKEMESL 109
           +  + +       + L      + D W      YN ++   C   M++ A +L  +M S 
Sbjct: 673 IAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSK 732

Query: 110 KLLPDVVTYNTLINRFFESGR 130
              PD V++  L++     GR
Sbjct: 733 GFPPDPVSFIALLHGLCLEGR 753


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 230/453 (50%), Gaps = 1/453 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY   +  L + GK++E   ++  M   G  P+  TY +L+   C    
Sbjct: 255 MESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARK 314

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +AM +   M  +   PD  TY  L++ + + G L++  ++  EME+    PDVVT+  
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   ++GR  EAF L+D + + G+ PN  T+N +I    +  ++D A  +  NME  G
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY  LID + K+G+  +A    + M  +G+  N +  N  L++L    +L EA 
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK 494

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N     G   D V+Y  ++  Y +  + + A+KL  EM + Q  P     N++I  L
Sbjct: 495 AMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ E+A  M   + +  + P   T+N ++ G   EGQ++KA+Q    M      P+ 
Sbjct: 555 YKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNT 614

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N LL  LC+   ++ ALK F          D +T+NT+I    K+ ++++A  L  +
Sbjct: 615 ITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ 674

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           M +K L PD  T   +   +++SG++E+A + T
Sbjct: 675 M-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRIT 706



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/560 (26%), Positives = 272/560 (48%), Gaps = 54/560 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + +  +YN ++  L + G   E  ++   M  +GL P+  T++ L+    K   +K  
Sbjct: 189 GFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTV 248

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +++ M      P+++TY + I      G ++EA+R+ K M+     PDVVTY  LI+ 
Sbjct: 249 MGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDA 308

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + +  +A  L  ++     KP+ VT+  ++  +   G +DK  KI   ME +G++PD
Sbjct: 309 LCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPD 368

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+  L++A CKAG + EAF ++D M ++G+  N  T NT++  L    +LD+A  L +
Sbjct: 369 VVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFS 428

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +    G      +Y  LI  + +     +AL+ +++MK R I P+    NA ++ L++ G
Sbjct: 429 NMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMG 488

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL------------------- 345
           +  +A  M NEL  SG+ PD  T+N ++  +   GQV++A+                   
Sbjct: 489 RLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVIN 548

Query: 346 ----------------QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
                           Q   +M E +  P +VT NILL+GL +EG ++KA++ F S    
Sbjct: 549 SLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGH 608

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G + +++T+NTL+  LCK   ++ A  +  +M      PD  T+  I    ++  +++ A
Sbjct: 609 GCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNA 668

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE-T 508
                       + HQ+         + + P  ++    +      G+ +DA +I E+  
Sbjct: 669 I----------WLFHQM--------KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFF 710

Query: 509 RQKGIAINKSTYMNLMNGLI 528
            Q G  I++S + ++M G++
Sbjct: 711 YQVGSNIDRSFWEDVMGGIL 730



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/595 (26%), Positives = 264/595 (44%), Gaps = 88/595 (14%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G  P+ V  N  L +L + G+L E + + +++K  GL P+  TYN+++  Y K+G 
Sbjct: 465  MKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQ 524

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + EA++++  M++ +  PDV   N LI+    AG +EEA+++   ME + L P VVTYN 
Sbjct: 525  VDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNI 584

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L+    + G+  +A +L + ++ HG  PN +T N ++   CK  ++D A K+   M    
Sbjct: 585  LLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN 644

Query: 181  FSPDCVTYNTLIDA----------------------------------NCKAGNMEEAFR 206
              PD +T+NT+I                                      K+G +E+AFR
Sbjct: 645  CRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFR 704

Query: 207  MM-----------------DVMGR-------------------KGLKMNTITLNTILHTL 230
            +                  DVMG                    + +  +   L  I+  L
Sbjct: 705  ITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVL 764

Query: 231  CCEKKLDEAYMLLNSASKR-GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C  KK   A  +    +K  G       Y  LI G+        A  L++EMK     P 
Sbjct: 765  CKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPD 824

Query: 290  TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
            TFTYN++I    +SGK  +  D+ +E+L  G  P+  T+N +I       +++KA+  + 
Sbjct: 825  TFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYY 884

Query: 350  KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
             +V   F P   T   L+ GL + G L+ A + F   +  G   +S  YN L++   K  
Sbjct: 885  NLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLG 944

Query: 410  RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
             ++ A      M ++ + PD  +Y  +   L  +GR+++A  +   + + G         
Sbjct: 945  HVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG--------- 995

Query: 470  NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                    +DP  ++Y+  IN      R ++AL +F E + +GI  +  TY +L+
Sbjct: 996  --------LDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLI 1042



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 257/529 (48%), Gaps = 21/529 (3%)

Query: 5   GCLPDNV----TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           G LP+ V    T N +L+ L    ++ ++  +   M++Q +  N  TY I+       G 
Sbjct: 115 GELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A   ++ M +   + + ++YN LI+    +G  +EA  + + M S  L P + T++ 
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSA 234

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    +         L++E++  G++PN  T+ I I+   ++GKID+A +I++ M+++G
Sbjct: 235 LMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG 294

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY  LIDA C A  +++A  +   M     K + +T  T+L        LD+  
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVE 354

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       GY  D V++  L+    +  + N A  L D M+++ ++P+  TYN +I GL
Sbjct: 355 KIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + + A+D+ + +   G+ P   T+  +I      G   KAL+   KM  +   P+I
Sbjct: 415 LRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI 474

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V CN  L  L   G L +A   F      G A DSVTYN ++    K  ++++A  LLSE
Sbjct: 475 VACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSE 534

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M + +  PD     ++   L ++GR+EEA +    M E                   + P
Sbjct: 535 MSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEM-----------------NLAP 577

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + ++Y+  +     +G+ + A+Q+FE     G + N  T+  L++ L K
Sbjct: 578 TVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCK 626



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 235/527 (44%), Gaps = 55/527 (10%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M    C PD +T+NTI+    K+ ++     L   MKK  L P+  T   L+ G  K G 
Sbjct: 640  MTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQ 698

Query: 61   LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            +++A R+  D   Q  S  D   +  ++ G       E+A    + +    +  D     
Sbjct: 699  IEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLI 758

Query: 120  TLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
             +I    +  ++  A  +  +   E G+KP    +N++I  + +   ++ A  +   M+ 
Sbjct: 759  PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKS 818

Query: 179  NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
             G +PD  TYN+LIDA+ K+G + E F + D M  +G K NTIT N ++  L    +LD+
Sbjct: 819  AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDK 878

Query: 239  AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            A  L               Y  L++G F                     P+  T+  +I 
Sbjct: 879  AMDL---------------YYNLVSGDFS--------------------PTPCTFGPLID 903

Query: 299  GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            GL +SG+ + A +M + ++  G  P+   +N +++G+   G V+ A +F  +MV++  +P
Sbjct: 904  GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP 963

Query: 359  DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            D+ +  IL+  LC  G ++ AL +F      G   D V YN +I+ L + +R E+A  L 
Sbjct: 964  DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLF 1023

Query: 419  SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             EM+ + + PD YTY ++   L   G +EEA K    +   G                 +
Sbjct: 1024 HEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG-----------------L 1066

Query: 479  DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             P+  +Y+  I  +   G  + A  I+++    G   N  T+  L N
Sbjct: 1067 KPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 65/120 (54%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD V YN +++ L +  +  E   L  +M+ +G+VP+  TYN L+     +G ++EA
Sbjct: 995  GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ + +      P+V+TYN LI G+  +G  E A+ + K+M      P+  T+  L N+
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPNQ 1114


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 230/424 (54%), Gaps = 1/424 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P +  +N +L  +      N+     ++ K + +V +  ++ I++ G C+ G ++++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKS 182

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  + +    P+V  Y  LI+G C  G +E+A  L  EM    L+ +  TY  LI+ 
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++G   + F++ +++ EHG+ PN  T+N ++   CK+G+   A K+   M E G S +
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   C+     EA ++MD M    +  N IT NT++   C   KL +A  L  
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCR 362

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG     V+Y  L++G+ R    + A K+  EM+ER I PS  TY  +I   ++S 
Sbjct: 363 DLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E AI + + + + G++PD  T++ +IHGFC +GQ+ +A +    MVEK  +P+ V  N
Sbjct: 423 NMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYN 482

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+EG   +AL+ FR    K  A +  +Y+ LI  LCKER+L++A  L+ +M + 
Sbjct: 483 TMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDS 542

Query: 425 KLGP 428
            + P
Sbjct: 543 GIDP 546



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  I++A  +   L+      ++M  +G VP    +N L++         +     +  +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ES 155

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           + K + DV+++ ++I G C AG +E++F L  E+      P+VV Y TLI+   + G   
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L  E+ + G+  N  T+ ++I    K G   +  ++   M+E+G  P+  TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           +  CK G  ++AF++ D M  +G+  N +T NT++  LC E K +EA  +++        
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + ++Y TLI G+    K  +AL L  ++K R + PS  TYN ++ G  + G T  A  M
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + E+ + G+ P + T+  +I  F     +E A+Q  + M E    PD+ T ++L+ G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +G + +A + F+S + K    + V YNT+I   CKE     A  L  +MEEK+L P+  +
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG 460
           Y+ +   L +  +L+EA+     M+++G
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKMIDSG 543



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 197/363 (54%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG  P+ V Y T++D   KKG++ + +DL  +M K GLV N  TY +L+ G  K G  K+
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              + + M ++   P+++TYN ++N  C  G  ++AF++  EM    +  ++VTYNTLI 
Sbjct: 252 GFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                 ++ EA K++D++  + I PN +T+N +I  +C  GK+ KA  + R+++  G SP
Sbjct: 312 GLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSP 371

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VTYN L+   C+ G+   A +M+  M  +G+K + +T   ++ T      ++ A  L 
Sbjct: 372 SLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLR 431

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  + G   D  +Y  LI G+    + N A +L+  M E+ + P+   YN MI G  + 
Sbjct: 432 SSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKE 491

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G + +A+ +  ++ +  + P+  +++ +I   C E ++++A     KM++    P    C
Sbjct: 492 GSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTIC 551

Query: 364 NIL 366
           N++
Sbjct: 552 NLI 554



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 189/331 (57%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG + +  TY  ++  LFK G   +  ++   M++ G+ PN  TYN +++  CK G 
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGR 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+A +V D M +     ++ TYN LI G C      EA ++  +M+S  + P+++TYNT
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   G+  +A  L  +L   G+ P+ VT+N+++  +C++G    A K+V+ MEE G
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTY  LID   ++ NME A ++   M   GL  +  T + ++H  C + +++EA 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  ++    +EV Y T+I GY ++  + RAL+L+ +M+E+++ P+  +Y+ +I  L
Sbjct: 464 RLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +  K ++A D++ +++ SG+ P +T  N I
Sbjct: 524 CKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 213/455 (46%), Gaps = 31/455 (6%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y ++IN +  +  L+ +     EM     +P    +N L+     S    + +   +E  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-S 155

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           +  +  +  +  I+IK  C+ G+I+K+  ++  + E GFSP+ V Y TLID  CK G +E
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A  +   MG+ GL  N  T   ++H L       + + +     + G + +  +Y  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
               +D +   A K++DEM+ER +  +  TYN +I GL +  K  +A  +++++    + 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T+NT+I GFCS G++ KAL     +  +   P +VT N+L+SG CR+G    A K 
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            +    +G     VTY  LI +  +   +E A  L S MEE  L PD +TY+ +      
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPN------------------------TSKTPEEI 478
            G++ EA +    MVE      ++++PN                             +E+
Sbjct: 456 KGQMNEASRLFKSMVE------KMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL 509

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            P+  SYS  I   C + + K+A  + E+    GI
Sbjct: 510 APNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 210/445 (47%), Gaps = 43/445 (9%)

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI----------KWYC--KEGK 165
           Y  +IN + +S     +    +E+ + G  P +   N ++          +W+C   E K
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           I    K+V          D  ++  +I   C+AG +E++F ++  +   G   N +   T
Sbjct: 157 I----KVVL---------DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++   C + ++++A  L     K G   +E +Y  LI G F++    +  +++++M+E  
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           + P+ +TYN ++  L + G+T+ A  + +E+ + G+  +  T+NT+I G C E +  +A 
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN 323

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  ++M      P+++T N L+ G C  G L KAL   R    +G +   VTYN L+S  
Sbjct: 324 KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGF 383

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN-- 463
           C++     A  ++ EMEE+ + P + TY  +      S  +E A +  S M E G +   
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDV 443

Query: 464 ----------------HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
                           ++  +   S   + ++P+ + Y+  I  +C +G    AL++F +
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRD 503

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
             +K +A N ++Y  L+  L K RK
Sbjct: 504 MEEKELAPNVASYSYLIRVLCKERK 528



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 18/241 (7%)

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  +I    QS   + +I   NE++  G +P    FN ++          +   F N+  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K    D+ +  I++ G C  G +EK+          G + + V Y TLI   CK+  +E
Sbjct: 157 IKVV-LDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  L  EM +  L  + +TY  +   L ++G  ++  +    M E G            
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG------------ 263

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                + P+  +Y+  +N+ C  GR KDA ++F+E R++G++ N  TY  L+ GL +  K
Sbjct: 264 -----VFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 533 S 533
           +
Sbjct: 319 A 319


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 231/457 (50%), Gaps = 7/457 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G + +  + N +L AL +  +   +  LL++MK+  + PN  T+ IL++  CK   + E
Sbjct: 299 LGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDE 358

Query: 64  AMRVVDLMTQNKS-----LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVT 117
           A+ V + M   +S      PDV TYN LI+G C  G  EE   L + M S  + +P+ VT
Sbjct: 359 ALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVT 418

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN LI+ + ++     A +L D++++ G+ PN VT N ++   CK G+I+ A +    M+
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G   + VTY  LI A C   N+E+A  + D M   G   + I   T++  L    KLD
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  +L+   + G+  D VS+  LI G+ R  K + A ++  EM+   I P   TYN +I
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-F 356
              S++G    A  ++ ++++ G++P   T+  +IH +C  G +++A++    M   S  
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P+ V  NIL++ LCR+  ++ AL       +KG   ++ T+N +   L ++  L  AF 
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFE 718

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           L+  M E    PD  T   +   L   G   + + F 
Sbjct: 719 LMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFV 755



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/544 (29%), Positives = 277/544 (50%), Gaps = 39/544 (7%)

Query: 14  NTILDALFKKGKLNEVRDLLSDM--KKQGLVPNRTTYNILVSGYCK---LGWLKEAMRVV 68
           N ++D LF+KG++++   LL +M   K    PN  T +I+ S   K   +G   +   +V
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 69  DLMT---QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            L++   +++  P+      LI+  C +G  + A+ +   +  L  + +  + N L+   
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315

Query: 126 FESGRSMEAFK----LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---EE 178
              GR+ E FK    L+ E+ E  I+PN VT  I+I   CK  ++D+A ++   M   E 
Sbjct: 316 ---GRARE-FKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGES 371

Query: 179 NGF--SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-NTITLNTILHTLCCEKK 235
           NGF   PD +TYNTLID  CK G  EE   +++ M  +   M NT+T N ++   C    
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           ++ A  L +  +K G   + V+  TL+ G  +  + N A++ ++EM+ + +  +  TY A
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I         E+A+++ +E+L++G  PD   + T+I G    G++++A    +KM E  
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           F PDIV+ N+L++G CR+  L++A +  +     G   D VTYNTLIS   K      A 
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            L+ +M ++ L P   TY A+  A   +G L+EA K    M             +TSK P
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM------------SSTSKVP 659

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
               P+++ Y+  IN  C + +   AL + ++ + KG+  N +T+  +  GL + +  +S
Sbjct: 660 ----PNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL-QEKNWLS 714

Query: 536 KAVD 539
           KA +
Sbjct: 715 KAFE 718



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 239/462 (51%), Gaps = 13/462 (2%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P+++    ++  L + G+ +   D+L  + K G V    + N L++    LG  +E  R
Sbjct: 267 FPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTA---LGRAREFKR 323

Query: 67  VVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLL--PDVVTY 118
           +  L+ + K +   P+V T+ +LIN  C    ++EA  + ++M   ES   L  PDV+TY
Sbjct: 324 MNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY 383

Query: 119 NTLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           NTLI+   + GR  E   L++ +  +    PN VT+N +I  YCK   I+ A ++   M 
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           ++G  P+ VT NTL+D  CK G +  A    + M  KGLK N +T   ++   C    ++
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  L +   + G   D + Y TLI+G  +  K +RA  +  +MKE    P   ++N +I
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  +  K ++A +ML E+  +G+ PD  T+NT+I  F   G    A +   KMV++   
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKA-VDSVTYNTLISSLCKERRLEDAFG 416
           P +VT   L+   C  G L++A+K FR      K   ++V YN LI+SLC++ +++ A  
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALS 683

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           L+ +M+ K + P+  T+ A+   L E   L +A +    M E
Sbjct: 684 LMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 201/393 (51%), Gaps = 2/393 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWL 61
           GF   PD +TYNT++D L K G+  E   L+  M+ Q   +PN  TYN L+ GYCK   +
Sbjct: 373 GFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMI 432

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + A  + D M ++   P+V T N L++G C  G +  A     EM+   L  + VTY  L
Sbjct: 433 EAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTAL 492

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  F       +A +L DE+ E G  P+A+ +  +I    + GK+D+A  ++  M+E GF
Sbjct: 493 IRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGF 552

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SPD V++N LI+  C+   ++EA+ M+  M   G+K + +T NT++           A+ 
Sbjct: 553 SPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHR 612

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE-RQIMPSTFTYNAMIWGL 300
           L+    K G     V+YG LI  Y  +   + A+K++ +M    ++ P+T  YN +I  L
Sbjct: 613 LMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSL 672

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + + A+ +++++   G+ P+  TFN +  G   +  + KA +  ++M E +  PD 
Sbjct: 673 CRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDY 732

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           +T  IL   L   G   K   F + + +   A 
Sbjct: 733 ITMEILTEWLSAVGETAKLKSFVQGYEVSASAA 765



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 1/262 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G   + VTY  ++ A      + +  +L  +M + G  P+   Y  L+SG  + G 
Sbjct: 477 MQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGK 536

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  V+  M +    PD+ ++N+LING+C    L+EA+ + KEME+  + PD VTYNT
Sbjct: 537 LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT 596

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++G    A +L+ ++ + G+ P  VT+  +I  YC  G +D+A KI R+M    
Sbjct: 597 LISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS 656

Query: 181 -FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+ V YN LI++ C+   ++ A  +MD M  KG+K NT T N +   L  +  L +A
Sbjct: 657 KVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKA 716

Query: 240 YMLLNSASKRGYYLDEVSYGTL 261
           + L++  ++     D ++   L
Sbjct: 717 FELMDRMTEHACNPDYITMEIL 738



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 1/178 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VTYNT++    K G  +    L+  M K+GLVP   TY  L+  YC  G 
Sbjct: 582 MENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN 641

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L EAM++  D+ + +K  P+   YN+LIN  C    ++ A  L  +M+   + P+  T+N
Sbjct: 642 LDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFN 701

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
            +     E     +AF+L+D + EH   P+ +T  I+ +W    G+  K    V+  E
Sbjct: 702 AMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/556 (30%), Positives = 265/556 (47%), Gaps = 30/556 (5%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY T++D L K G L+  + LL  M   G  PN  TY  L+ G CK     +A++ V  
Sbjct: 11  VTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKR 70

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M ++   PD+ TYN LI+G C A  +++A  + +E+      P+ +TY+TL+       R
Sbjct: 71  MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRR 130

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA---CKIVRNMEENGFSPDCVT 187
             +A  LI E+   G   N V +   I  +C E +   +   C+    M E+G  PD VT
Sbjct: 131 LDQARGLIREMILRGSVCNLVVYIDCIFGFC-EARCQSSRYECRDGDEMIESGRIPDVVT 189

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT I   CKAG +++   M++ M R G+  + +T  +I+  LC   ++D+A+ +     
Sbjct: 190 YNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGML 249

Query: 248 KRGYYLDEVSYGTLITGYFRDEK---ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +RG   D ++Y  ++    R  +    +  L+    MK   +M   +T+NA I  L +SG
Sbjct: 250 ERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVM-EVYTHNAFIGALCRSG 308

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTC 363
           K   A ++L  +++SG +P+  ++N +I G C  G V+ A +   KM++    KPD++  
Sbjct: 309 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 368

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDAFGLLSEME 422
           N L+SG C+ G L +A +       K   V D VTYNTLI    K   L+ A  LL EM+
Sbjct: 369 NTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQ 428

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKT---- 474
                P+  TYAA+     + G  EEA+     M   G     I +  V    SK     
Sbjct: 429 AVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMS 488

Query: 475 ------------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                            P +I+Y   I+ +C     +  L + +E   +G + +  TY  
Sbjct: 489 KAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNV 548

Query: 523 LMNGLIKRRKSISKAV 538
           L+  L +  +  SKA+
Sbjct: 549 LIAKLAETEEVPSKAL 564



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 215/427 (50%), Gaps = 7/427 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTYNT +  L K GKL++  ++L +M + G+ P+  T+  ++SG CK   + +A
Sbjct: 182 GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDA 241

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK--LLPDVVTYNTLI 122
            +V   M +   +PD  TY+++++    A  L+    + + M+++K   + +V T+N  I
Sbjct: 242 FQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFI 301

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                SG+   A  ++  + E G  PN +++N +I   CK G +D A K+ R M ++G  
Sbjct: 302 GALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCC 361

Query: 183 -PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEAY 240
            PD + +NTLI   CKAG + +A +++  M  K + + + +T NT++        L +A 
Sbjct: 362 KPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAK 421

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +LL      G   + V+Y  LI GY +      A  L+DEM  +   P   TYN ++   
Sbjct: 422 LLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAF 481

Query: 301 SQSGKTEQAIDMLNELLQ--SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           S++G   +A  +  +L    S   PD  T+  +I G+C     E+ L    +M  + +  
Sbjct: 482 SKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSC 541

Query: 359 DIVTCNILLSGLCR-EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           D  T N+L++ L   E +  KAL  ++  + +     +  +N+L+    +   +  A  +
Sbjct: 542 DSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSM 601

Query: 418 LSEMEEK 424
           + EM EK
Sbjct: 602 VQEMNEK 608



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 113/213 (53%), Gaps = 3/213 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+PD VTYNT++D   K G L + + LL +M+  G  PN  TY  L++GY K G  +EA 
Sbjct: 397 CVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAE 456

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLIN 123
            + D M+     PD+ TYN +++ +  AGM+ +A  + +++  ++    PD +TY  LI+
Sbjct: 457 SLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILID 516

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI-DKACKIVRNMEENGFS 182
            +  +  + +   L+ E+   G   ++ T+N++I    +  ++  KA  + + M +    
Sbjct: 517 GYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCV 576

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           P    +N+L+    + G++  A  M+  M  KG
Sbjct: 577 PSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 252/524 (48%), Gaps = 21/524 (4%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC P    YN +LDA+  + +   +  + S+MK+ G  PN  TYNIL+   CK   +  
Sbjct: 143 FGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDG 202

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A +++  M+     PDV +Y  +I+     G +EEA  L     S++  P+V  YN LIN
Sbjct: 203 ACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALIN 257

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F    +  E F L+ ++ E GI PN +T++ +I      G ++ A  +   M   G SP
Sbjct: 258 GFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSP 317

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  T+ +L+      G + EA  + + M  +G + N +  NT++H LC   K+ EA  + 
Sbjct: 318 NVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVS 377

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   + G   +  +YG LI G+ +      A ++W++M     +P+   Y +M+  L +S
Sbjct: 378 SKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRS 437

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
               QA  ++ ++      P+  TFNT I G C  G+VE A+    +M +    P+I T 
Sbjct: 438 SMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTY 497

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N +L GL +E  +++AL+       KG  ++ VTYNT+    C   + E+A  LL +M  
Sbjct: 498 NEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLV 557

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD  TY  +  A    G+++ A +    +   GK                  P   
Sbjct: 558 GGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK----------------WVPEVA 601

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +Y+  +   C+Q   ++A+   ++   +GI +N +T+  L+ GL
Sbjct: 602 AYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 231/444 (52%), Gaps = 6/444 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD V+Y T++ ++ K GK+ E R+L   ++ Q   PN + YN L++G+C+   
Sbjct: 210 MSNKGCEPDVVSYTTVISSMSKLGKVEEAREL--SIRFQ---PNVSVYNALINGFCREYK 264

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE   ++  M +    P+V TY+ +I+     G +E A  +  +M      P+V T+ +
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  +F  GR +EA  + + + E G +PN V +N +I   C  GK+ +A  +   ME NG
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+  TY  LID   KAG++  A  + + M   G   N +   ++++ LC      +A+
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   S      + V++ T I G     +   A+ L+ +M++    P+  TYN ++ GL
Sbjct: 445 SLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + ++A++++ E+ + GM  +  T+NTI  GFC+ G+ E+AL+   KM+    KPD 
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLS 419
           +T N L    C +G ++ A++        GK V  V  Y +L+  +C +  +E+A   L 
Sbjct: 565 ITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLD 624

Query: 420 EMEEKKLGPDRYTYAAIHTALVES 443
           +M  + +  +  T+ A+   L  S
Sbjct: 625 KMLNEGICLNAATWNALVRGLFNS 648



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 261/538 (48%), Gaps = 28/538 (5%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           +TY  +++ L ++  ++ V+ LL  MK +G+  +   +  +++ Y ++G  ++A+++   
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +    P V  YN L++   +    +    +   M+     P+V TYN L+    ++ R
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI-VRNMEENGFSPDCVTYN 189
              A KL+ E+   G +P+ V++  +I    K GK+++A ++ +R      F P+   YN
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIR------FQPNVSVYN 253

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+  C+   ++E F ++  M  KG+  N IT +T++ +L     ++ A  +      R
Sbjct: 254 ALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVR 313

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   +  ++ +L+ GYF   +   AL +W+ M E    P+   YN +I GL   GK  +A
Sbjct: 314 GCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEA 373

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           + + +++ ++G  P+ +T+  +I GF   G +  A +  NKM+     P++V    +++ 
Sbjct: 374 VSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNV 433

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LCR  +  +A              ++VT+NT I  LC   R+E A  L  +ME+    P+
Sbjct: 434 LCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPN 493

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--------SKTPEE---- 477
             TY  +   L++  R++EA +  + M E G +   +V  NT         K  E     
Sbjct: 494 IKTYNEVLDGLLKENRIKEALELVTEMEEKG-MELNLVTYNTIFGGFCNVGKFEEALKLL 552

Query: 478 -------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK-STYMNLMNGL 527
                  + P +I+Y+     +C QG+ K A+Q+ ++    G  + + + Y +L+ G+
Sbjct: 553 GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGI 610



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 168/320 (52%), Gaps = 3/320 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF   P+ V YNT++  L   GK+ E   + S M++ G  PN +TY  L+ G+ K G L
Sbjct: 348 EGFE--PNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A  + + M  N  +P+V  Y  ++N  C + M  +A+ L ++M +    P+ VT+NT 
Sbjct: 406 VGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTF 465

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I     SGR   A  L  +++++G  PN  T+N ++    KE +I +A ++V  MEE G 
Sbjct: 466 IKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGM 525

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             + VTYNT+    C  G  EEA +++  M   G+K + IT NT+ +  C + K+  A  
Sbjct: 526 ELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQ 585

Query: 242 LLNSASKRGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           LL+  S  G ++ EV+ Y +L+ G         A+   D+M    I  +  T+NA++ GL
Sbjct: 586 LLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645

Query: 301 SQSGKTEQAIDMLNELLQSG 320
             S      I +L+++L SG
Sbjct: 646 FNSLGHLGPIHILDDILTSG 665



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 193/431 (44%), Gaps = 60/431 (13%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN +   G + +A K+   + E G +P    +N ++     E +      I  NM+ +G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN L+ A CK   ++ A +++  M  KG + + ++  T++ ++    K++EA 
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR 239

Query: 241 MLLNSASKRGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            L    S R  +   VS Y  LI G+ R+ K      L  +M E+ I P+  TY+ +I  
Sbjct: 240 EL----SIR--FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS  G  E A+ +  ++   G  P+  TF +++ G+   G+V +AL   N+M E+ F+P+
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPN 353

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +V                                    YNTLI  LC   ++ +A  + S
Sbjct: 354 VVA-----------------------------------YNTLIHGLCSHGKMGEAVSVSS 378

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------ 473
           +ME     P+  TY A+     ++G L  A +  + M+  G I + VV  +         
Sbjct: 379 KMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSS 438

Query: 474 ------------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                       + +   P++++++  I   C  GR + A+ +F +  Q G + N  TY 
Sbjct: 439 MFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYN 498

Query: 522 NLMNGLIKRRK 532
            +++GL+K  +
Sbjct: 499 EVLDGLLKENR 509



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 156/340 (45%), Gaps = 25/340 (7%)

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
            +   K  +   +T   ++  L  E  +D    LL      G    E  +  +I  Y R 
Sbjct: 68  SIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRV 127

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
             A +ALK++  ++E    P+   YN ++  +    + +    + + + + G  P+  T+
Sbjct: 128 GLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTY 187

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N ++   C   +V+ A +   +M  K  +PD+V+   ++S + + G +E+A    R   +
Sbjct: 188 NILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA----RELSI 243

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           + +   SV YN LI+  C+E ++++ F LL +M EK + P+  TY+ + ++L   G +E 
Sbjct: 244 RFQPNVSV-YNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVEL 302

Query: 449 A----------------QKFTSIM---VETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
           A                  FTS+M      G++  + +        E  +P+ ++Y+  I
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRV-LEALNIWNRMAEEGFEPNVVAYNTLI 361

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  CS G+  +A+ +  +  + G + N STY  L++G  K
Sbjct: 362 HGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK 401



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 24/288 (8%)

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            L + YFR    ++A +            +  TY  MI  L +    +    +L ++   
Sbjct: 60  VLASNYFRSIANSKAFQ-----------HTQLTYQIMIEKLGRECDVDGVQYLLQQMKLE 108

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+   E  F  +I+ +   G  E+AL+   ++ E   +P +   N LL  +  E   +  
Sbjct: 109 GISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMI 168

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
              + +    GK  +  TYN L+ +LCK  R++ A  LL EM  K   PD  +Y  + ++
Sbjct: 169 EPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISS 228

Query: 440 LVESGRLEEAQKFT-----SIMVETGKIN--------HQVVQPNTSKTPEEIDPSSISYS 486
           + + G++EEA++ +     ++ V    IN         +V         + IDP+ I+YS
Sbjct: 229 MSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYS 288

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             I+     G  + AL ++ +   +G + N  T+ +LM G   R + +
Sbjct: 289 TVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVL 336



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 36/181 (19%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +GC P+  TYN +LD L K+ ++ E  +L+++M+++G+  N  TYN +  G+C +G 
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 61  LKEAMRVV----------DLMTQN--------------------------KSLPDVWTYN 84
            +EA++++          D +T N                          K +P+V  Y 
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYT 604

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            L+ G CN   +EEA     +M +  +  +  T+N L+   F S   +    ++D++   
Sbjct: 605 SLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTS 664

Query: 145 G 145
           G
Sbjct: 665 G 665


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 165/621 (26%), Positives = 291/621 (46%), Gaps = 88/621 (14%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+ VTYN+++D     G +   + +L+ M ++G+  N  TY +L+ GYCK G 
Sbjct: 282 MERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQ 341

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK---------------- 104
           +++A +++  M +     D   Y +LI+ +C AG +++A R+R                 
Sbjct: 342 MEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNS 401

Query: 105 -------------------EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                               M+   L PD   YNTL++ F +    ++AFKL DE+   G
Sbjct: 402 LINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKG 461

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           +    VT+N ++K     G ++ A  I   M + G +P+ VTY TL+DA  K G  + A 
Sbjct: 462 VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAM 521

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +      KG   +    NT++   C  +KL +A  +     + G+  DE++Y TLI GY
Sbjct: 522 MIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGY 581

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +      ALKL D  +   I  ST  YN++I G+ +S + ++   +L E+    + P+ 
Sbjct: 582 CKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNV 641

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA------ 379
            T+ ++I G+C +G ++KA   + KM++K   P+I+  + ++S L R G +++A      
Sbjct: 642 VTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQ 701

Query: 380 --------------------------LKFFRSWILKGKAV---DSVTYNTLISSLCKERR 410
                                      K   S+  K  ++   +++ YN  I+ LCK + 
Sbjct: 702 IADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKN 761

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV--- 467
           ++D   +LS++  K   PD YTY ++  A    G++ EA      M+  G + + VV   
Sbjct: 762 IDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNA 821

Query: 468 -------QPNTSK--------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
                    N  +          + + P+ ++Y+  I+ +C  GR  +AL++ ++ R++G
Sbjct: 822 LINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEG 881

Query: 513 IAINKSTYMNLMNGLIKRRKS 533
           I  +  TY  L++GL    KS
Sbjct: 882 ICPSSITYSTLIHGLYMEGKS 902



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 266/544 (48%), Gaps = 18/544 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD  +Y  +++A  K+G+++E  + + +M++    PN  TYN L+ GY  LG 
Sbjct: 247 MIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGD 306

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A +V+ LM++     +  TY +LI G+C  G +E+A +L   M    L  D   Y  
Sbjct: 307 VCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGV 366

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +  +GR  +A ++ D + + G+K N V  N +I  YCK G ++KA +++ +M++  
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   YNTL+D  CK  +  +AF++ D M  KG+    +T NT+L  L     ++ A 
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL 486

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N   KRG   +EV+Y TL+  +F+    +RA+ +W +   +    S   YN MI G 
Sbjct: 487 HIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K  QA ++  ++ + G  PDE T+ T+I G+C  G + +AL+  +           
Sbjct: 547 CKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSST 606

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N L++G+ R   L+K          +  + + VTY +LI+  C +  ++ A+    +
Sbjct: 607 EMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFK 666

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI---NHQVVQPNTS----K 473
           M +K + P+    + I ++L   G+++EA      + +   I    H V  P +     +
Sbjct: 667 MIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLE 726

Query: 474 TPEEID-----------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
           T + +D            ++I Y+  I   C      D  +I  +   KG   +  TY +
Sbjct: 727 TQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCS 786

Query: 523 LMNG 526
           L++ 
Sbjct: 787 LIHA 790



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 243/505 (48%), Gaps = 17/505 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            ++ IL    +KG       +  +M K G VP+  + N L+S   + G   +A+ V + M
Sbjct: 188 VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQM 247

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                LPD+++Y +++N +C  G ++EAF   KEME     P+VVTYN+LI+ +   G  
Sbjct: 248 IALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDV 307

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A K++  + E GI  N+ T+ ++IK YCK G++++A K++  M E     D   Y  L
Sbjct: 308 CGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVL 367

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I A C AG +++A R+ D M + GLKMNT+  N++++  C    +++A  +L S      
Sbjct: 368 IHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNL 427

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D   Y TL+ G+ + E   +A KL DEM  + +  +  TYN ++  L   G  E A+ 
Sbjct: 428 KPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALH 487

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + N + + G+ P+E T+ T++  F   G  ++A+      + K F   I   N ++ G C
Sbjct: 488 IWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFC 547

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +   L +A + F      G   D +TY TLI   CK   L +A  L    E   +     
Sbjct: 548 KMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTE 607

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
            Y ++ T +  S   EE QK   ++ E                  E+ P+ ++Y   I  
Sbjct: 608 MYNSLITGVFRS---EELQKLNGLLAEMKN--------------RELSPNVVTYGSLIAG 650

Query: 492 HCSQGRYKDALQIFEETRQKGIAIN 516
            C +G    A   + +   KGIA N
Sbjct: 651 WCDKGMMDKAYNAYFKMIDKGIAPN 675



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 221/464 (47%), Gaps = 1/464 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYNT+L  LF  G +     + + M K+G+ PN  TY  L+  + K+G    AM +   
Sbjct: 467 VTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD 526

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
                    +  YN +I G+C    L +A  +  +M+ L   PD +TY TLI+ + + G 
Sbjct: 527 ALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGN 586

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            +EA KL D  +  GI  +   +N +I    +  ++ K   ++  M+    SP+ VTY +
Sbjct: 587 LVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGS 646

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C  G M++A+     M  KG+  N I  + I+ +L    K+DEA ++L+  +   
Sbjct: 647 LIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADID 706

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
                     L     R  +  + +  + +      + +   YN  I GL +S   +   
Sbjct: 707 PIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVR 766

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L++LL  G  PD  T+ ++IH   + G+V +A    + M+     P+IV  N L++GL
Sbjct: 767 RILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGL 826

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G L++A + F     KG +   VTYNTLI   CK  R  +A  L  +M E+ + P  
Sbjct: 827 CKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSS 886

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
            TY+ +   L   G+ E++    + M++ GK    V+ P  ++ 
Sbjct: 887 ITYSTLIHGLYMEGKSEQSVGLLNEMMKAGK-GSSVMDPLVARA 929



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 211/491 (42%), Gaps = 77/491 (15%)

Query: 52  VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY-NMLI----NGWCNAGMLEEAFRLRKEM 106
           VS YCK         +V ++++ +   +V  Y N L+    N +  + + +E   + +E 
Sbjct: 132 VSSYCK---------IVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYRE- 181

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
                 P V  ++ ++  F E G +  A  + D + + G  P+  + N ++    + G+ 
Sbjct: 182 --FSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEA 237

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            KA  +   M   G  PD  +Y  +++A CK G ++EAF  +  M R             
Sbjct: 238 FKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS------------ 285

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
               CCE  +                   V+Y +LI GY        A K+   M E+ I
Sbjct: 286 ----CCEPNV-------------------VTYNSLIDGYVSLGDVCGAKKVLALMSEKGI 322

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
             ++ TY  +I G  + G+ EQA  ++  +++  +  DE  +  +IH +C+ G+V+ AL+
Sbjct: 323 PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR 382

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKA---LKFFRSWILKGKAVDSVTYNTLIS 403
             + M++   K + V CN L++G C+ G + KA   L   + W LK    DS  YNTL+ 
Sbjct: 383 IRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKP---DSYGYNTLLD 439

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
             CK+     AF L  EM  K +     TY  +   L   G +E A    ++M + G   
Sbjct: 440 GFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG--- 496

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         + P+ ++Y   ++     G +  A+ I+++   KG   + + Y  +
Sbjct: 497 --------------VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTM 542

Query: 524 MNGLIKRRKSI 534
           + G  K  K +
Sbjct: 543 ICGFCKMEKLV 553



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 101/174 (58%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           + +N+ YN  +  L K   +++VR +LSD+  +G  P+  TY  L+     +G + EA  
Sbjct: 743 ISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFC 802

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D M     +P++  YN LING C +G L+ A RL  ++    L P VVTYNTLI+ + 
Sbjct: 803 LRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYC 862

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           + GR+ EA +L D++ E GI P+++T++ +I     EGK +++  ++  M + G
Sbjct: 863 KGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 1/158 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PDN TY +++ A    GK+NE   L  DM   GLVPN   YN L++G CK G L  A
Sbjct: 776 GFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRA 835

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+ + + +    P V TYN LI+G+C  G   EA  L+ +M    + P  +TY+TLI+ 
Sbjct: 836 RRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHG 895

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
            +  G+S ++  L++E+ + G K ++V   ++ + Y K
Sbjct: 896 LYMEGKSEQSVGLLNEMMKAG-KGSSVMDPLVARAYVK 932


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 240/464 (51%), Gaps = 3/464 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAM 65
           +PD VTYNT+++   K  +L E R L   MKK G   PN  TY++L+  YCK G + E +
Sbjct: 146 VPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGL 205

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +++ M +     DV+ Y+ LI+ +C  G +E    L  EM   K+ P+VVTY+ L+   
Sbjct: 206 GLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGL 265

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +GR  EA +++ ++   G++P+ V + ++    CK G+   A K++  M + G  P  
Sbjct: 266 GRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGT 325

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TYN +++  CK   M++AF ++++M +KG K + +T NT+L  LC   K+ EA  L   
Sbjct: 326 LTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKL 385

Query: 246 ASKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +++  D  +   LI G  ++ + + A ++   M E  +  +  TYN +I G   +
Sbjct: 386 LLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAA 445

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K  +A+ +    ++SG  P+  T++ +I+G C    +  A     KM +   +P ++  
Sbjct: 446 RKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDY 505

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L++ LCRE  LE+A   F+        VD V++N +I    K   ++ A  LLSEM  
Sbjct: 506 NALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFM 565

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             L PD  T++ +     + G L+EA      MV  G +   VV
Sbjct: 566 MDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVV 609



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 258/527 (48%), Gaps = 22/527 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P     +T++D L K  + + V  +   M    ++P  T+ + L   +        A  V
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK--LLPDVVTYNTLINRF 125
           + LMT+     +V+  N+++ G+C +G  ++A  L  +M+     ++PD VTYNTL+N F
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 126 FESGRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            ++ R  EA  L + + + G  +PN VT++++I  YCK G++ +   ++  ME  G   D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y++LI A C  G++E    + D M R+ +  N +T + ++  L    +  EA  +L 
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + RG   D V+Y  L  G  ++ +A  A+K+ D M ++   P T TYN ++ GL +  
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF--KPDIVT 362
           + + A  ++  +++ G  PD  T+NT++ G C  G++ +A+     ++ + F  KPD+ T
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFT 399

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
           CN L+ GLC+EG +  A +   S +  G   + VTYN LI      R+L +A  L     
Sbjct: 400 CNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV 459

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E    P+  TY+ +   L +   L  A+     M ++G                 I P+ 
Sbjct: 460 ESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSG-----------------IRPTV 502

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I Y+  +   C +   + A  +F+E R     ++  ++  +++G +K
Sbjct: 503 IDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLK 549



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 221/422 (52%), Gaps = 2/422 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C P+ VTY+ ++D   K G++ E   LL +M+++GL  +   Y+ L+S +C  G +
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +    + D M + K  P+V TY+ L+ G    G   EA  + K+M +  + PDVV Y  L
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
            +   ++GR+ +A K++D + + G +P  +T+N+++   CKE ++D A  +V  M + G 
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDEA 239
            PD VTYNTL+   C AG + EA  +  ++   +  +K +  T N ++  LC E ++ +A
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDA 416

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +S  + G   + V+Y  LI GY    K   ALKLW    E    P++ TY+ MI G
Sbjct: 417 ARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMING 476

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +      A  +  ++  SG+ P    +N ++   C E  +E+A     +M   +   D
Sbjct: 477 LCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVD 536

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +V+ NI++ G  + G ++ A +      +     D+VT++ LI+   K   L++A GL  
Sbjct: 537 VVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYE 596

Query: 420 EM 421
           +M
Sbjct: 597 KM 598



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 216/436 (49%), Gaps = 2/436 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY+ ++  L + G+  E  ++L DM  +G+ P+   Y +L  G CK G   +A++V
Sbjct: 253 PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKV 312

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +DLM Q    P   TYN+++NG C    +++AF + + M      PD VTYNTL+     
Sbjct: 313 LDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCG 372

Query: 128 SGRSMEAFKLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           +G+  EA  L   L  ++  +KP+  T N +I+  CKEG++  A +I  +M E G   + 
Sbjct: 373 AGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNI 432

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN LI+    A  + EA ++       G   N++T + +++ LC  + L  A  L   
Sbjct: 433 VTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK 492

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G     + Y  L+T   R++   +A  L+ EM+         ++N +I G  ++G 
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A ++L+E+    ++PD  TF+ +I+ F   G +++A+  + KMV     P +V  + 
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G   +G  EK +        K   +DS   +T+++ LC   R  D   +L +  ++ 
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQS 672

Query: 426 LGPDRYTYAAIHTALV 441
               + T    H  L+
Sbjct: 673 EHTSKGTTIKCHELLM 688



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 239/496 (48%), Gaps = 24/496 (4%)

Query: 41  LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK--SLPDVWTYNMLINGWCNAGMLEE 98
           ++P R   N     + +   L +A+ +      N   S P     + LI+    A   + 
Sbjct: 1   MIPKRLLNNSSSIAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDA 60

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
              +  +M S  +LP   + + L   F  +     AF ++  + + G   N    N+++K
Sbjct: 61  VVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLK 120

Query: 159 WYCKEGKIDKACKIVRNMEEN--GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG- 215
            +C+ G+ DKA  +   M+ N     PDCVTYNTL++  CKA  + EA  + + M + G 
Sbjct: 121 GFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGD 180

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + N +T + ++   C   ++ E   LL    + G   D   Y +LI+ +  +       
Sbjct: 181 CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGR 240

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L+DEM  R++ P+  TY+ ++ GL ++G+  +A +ML ++   G+ PD   +  +  G 
Sbjct: 241 ELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G+   A++  + MV+K  +P  +T N++++GLC+E  ++ A       + KGK  D+
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360

Query: 396 VTYNTLISSLCKERRLEDAFGL--LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           VTYNTL+  LC   ++ +A  L  L   E+  + PD +T   +   L + GR+ +A +  
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           S MVE G      +Q N            ++Y+  I  + +  +  +AL++++   + G 
Sbjct: 421 SSMVEMG------LQGNI-----------VTYNFLIEGYLAARKLIEALKLWKYAVESGF 463

Query: 514 AINKSTYMNLMNGLIK 529
           + N  TY  ++NGL K
Sbjct: 464 SPNSMTYSVMINGLCK 479


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 265/532 (49%), Gaps = 24/532 (4%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW------LKEAMRV 67
           N +L  L +  +   +R L  +MK  G  PN  TY I+++ YCK  +       ++A  +
Sbjct: 218 NFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEI 277

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M +N   P V TY+  I G C  G +E A    + + S   L +V  YN +I+   +
Sbjct: 278 LEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCK 337

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA K+++E+   GI P+  T++I+I  +CK+G ++K   ++  M+ +   P  V+
Sbjct: 338 KGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS 397

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++L    CK    + +  +   +G  G K +    + ++   C +  LD A+ L+    
Sbjct: 398 YSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +     D  ++ +L+ G+ +      AL+ ++ M E  I+PS  T N +I    + G+ E
Sbjct: 458 RNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVE 517

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A++++NE+   G+ P+  T+N +I+  C E + E+AL+    M++++  P +V  + L+
Sbjct: 518 EALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G  ++   +KAL  +   +  G   D V Y  LI+ LC   R+ +A+ L  +M E  + 
Sbjct: 578 DGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMT 637

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD+ +Y ++       G + +A    + M++ G +                 P+ ++Y+ 
Sbjct: 638 PDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHL-----------------PTVVTYTS 680

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++ +C   R   A  + +E ++KGI  +  TY N++    +RR ++ KA++
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTY-NVLIAAHRRRGNLDKALE 731



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 237/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P  VTY+T +  L + G +    D +  +     + N   YN ++ G CK G 
Sbjct: 281 MERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGE 340

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA++V++ M      PDV+TY++LI+G+C  G +E+   L +EM+   + P +V+Y++
Sbjct: 341 LDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSS 400

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L +   +   S  +  +  +L   G K +   ++I+IK +C +G +D A K++  M  N 
Sbjct: 401 LFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNN 460

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD   + +L+   CK G    A    ++M   G+  +  T N I+   C E +++EA 
Sbjct: 461 LAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEAL 520

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+N    +G + +  +Y  +I    ++ K+ RAL+L+  M +R ++PS   Y+ +I G 
Sbjct: 521 NLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGF 580

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++   +++A+ +   +L+ G+ PD   +  +I+  C   ++ +A     KM E    PD 
Sbjct: 581 AKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDK 640

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++   +++G CR G + KA   F   + +G     VTY +L+   CK  R++ A  L+ E
Sbjct: 641 ISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDE 700

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M+ K + PD  TY  +  A    G L++A +  + M E G
Sbjct: 701 MKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENG 740



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/532 (26%), Positives = 260/532 (48%), Gaps = 25/532 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEV-------RDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           P NV   TI+   + KG   E         ++L +M++ G  P   TY+  + G C++G+
Sbjct: 246 PPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGY 305

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A+  V  +     L +V+ YN +I+G C  G L+EA ++ +EM+S  + PDV TY+ 
Sbjct: 306 VESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSI 365

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   +   LI+E+    ++P+ V+++ +    CK+   D +  I R++   G
Sbjct: 366 LIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAG 425

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D   Y+ LI   C  G+++ A ++M+ M R  L  +     +++H  C       A 
Sbjct: 426 YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNAL 485

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              N   + G      +   +I  + R+ +   AL L +EM+ + I P+ FTYNA+I  L
Sbjct: 486 EFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRL 545

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K+E+A+++   +L+  ++P    ++T+I GF  +   +KAL  + +M++    PD+
Sbjct: 546 CKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDM 605

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V   IL++ LC    + +A   F+     G   D ++Y ++I+  C+   +  A+ L +E
Sbjct: 606 VAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNE 665

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++   P   TY ++     +  R++ A      M   G                 I P
Sbjct: 666 MLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG-----------------ITP 708

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             ++Y+  I  H  +G    AL++  E ++ G+  +  TYM ++  L+K +K
Sbjct: 709 DVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYM-MLEWLLKAKK 759



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 225/522 (43%), Gaps = 54/522 (10%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYN-ILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DV 80
           K NE+R     MK++  +  +   + ++V  +  L W  E  R +   T  K       +
Sbjct: 71  KRNEIRV----MKRRSRIHRKHVLSPVVVKVFKSLNW--EVARHIKFSTTMKKYGFSRSI 124

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
             +  ++N    AGM          ME   LL D+V Y   +N        ++AF+L   
Sbjct: 125 DAFRTVVNVLALAGM---------HMEVYALLRDIVCYYNKVN--------LDAFELFPI 167

Query: 141 LDEH--GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           L E       + +  +++IK +     ++ A  +    ++ G      + N L+    +A
Sbjct: 168 LLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEA 227

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM-------LLNSASKRGY 251
              E    + + M   G   N  T  TI+    C+    EA +       +L    + G 
Sbjct: 228 NRREFLRSLFEEMKSTGPPPNVFTY-TIMMNFYCKGNFGEADIDTRQATEILEEMERNGE 286

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               V+Y T I G  R      AL     +     + + + YNA+I GL + G+ ++A+ 
Sbjct: 287 SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALK 346

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L E+   G+ PD  T++ +IHGFC +G VEK L    +M   + +P +V+ + L  GLC
Sbjct: 347 VLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLC 406

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++ + + +L  FR     G   D   Y+ LI   C +  L+ A  L+ EM    L PD  
Sbjct: 407 KKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPS 466

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
            + ++     + G    A +F ++M+E G                 I PS  + +  I+ 
Sbjct: 467 NFESLVHGFCKMGLWVNALEFFNMMLEGG-----------------ILPSIATCNVIIDA 509

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           HC +GR ++AL +  E + +GI  N  TY  ++N L K RKS
Sbjct: 510 HCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKS 551



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 140/261 (53%), Gaps = 1/261 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG G LP   T N I+DA  ++G++ E  +L+++M+ QG+ PN  TYN +++  CK   
Sbjct: 492 LEG-GILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERK 550

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+ +  LM +   LP V  Y+ LI+G+      ++A  L   M  + + PD+V Y  
Sbjct: 551 SERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTI 610

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN      R  EA+ L  ++ E+G+ P+ +++  +I  +C+ G + KA  +   M + G
Sbjct: 611 LINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRG 670

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTY +L+D  CK   ++ A  ++D M RKG+  + +T N ++        LD+A 
Sbjct: 671 HLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKAL 730

Query: 241 MLLNSASKRGYYLDEVSYGTL 261
            +LN   + G   D ++Y  L
Sbjct: 731 EMLNEMKENGVLPDHMTYMML 751



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 96/166 (57%), Gaps = 1/166 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD V Y  +++ L  + ++ E  +L   M + G+ P++ +Y  +++G+C++G 
Sbjct: 596 MLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGD 655

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  + + M Q   LP V TY  L++G+C    ++ A  L  EM+   + PDVVTYN 
Sbjct: 656 MRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNV 715

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
           LI      G   +A ++++E+ E+G+ P+ +T+ +M++W  K  K+
Sbjct: 716 LIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY-MMLEWLLKAKKL 760


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 230/434 (52%), Gaps = 38/434 (8%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L AL K+ K+ +V  +  +M K+ +  N  T+NI ++G C+ G L +A   ++ M  
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 74  NKSLPDVWTYNMLINGWC---NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
               P+V TYN L++G+C   +AG + +A    KEM + K+ P+ VT+NTLI+ F +   
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A K  +E+ + G+KPN VT+N +I   C  GK+++A  +   M   G  P+ VTYN 
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  CK   M+EA ++ D + ++ L  N IT NT++   C E  ++E + L +S    G
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  +Y  LI G  R +    A +L +EM+ + +     TYN +I GL ++ K+  A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +LNE+   G+ P+  T+NT++ G+C EG+++ AL    +M ++  +P++VT N+L+ G 
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGY 528

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C                                   K  +LE A GLL+EM EK L P+R
Sbjct: 529 C-----------------------------------KINKLEAANGLLNEMLEKGLNPNR 553

Query: 431 YTYAAIHTALVESG 444
            TY  +   ++E G
Sbjct: 554 TTYDIVRLEMLEKG 567



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/358 (35%), Positives = 201/358 (56%), Gaps = 3/358 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK---LGWLKEAMRVV 68
           T+N  ++ L + GKLN+  D + DMK  G+ PN  TYN LV GYCK    G + +A   +
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFM 261

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M  NK  P+  T+N LI+G+C    +  A +  +EM+   L P++VTYN+LIN    +
Sbjct: 262 KEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNN 321

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  EA  L D++   G+KPN VT+N +I  +CK+  + +A K+  ++ +    P+ +T+
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NT+IDA CK G MEE F +   M  +G+  N  T N ++  LC ++ L  A  LLN    
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D V+Y  LI G  +++K+  A KL +EM    + P+  TYN ++ G    GK + 
Sbjct: 442 KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKA 501

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           A+++   + +    P+  T+N +I G+C   ++E A    N+M+EK   P+  T +I+
Sbjct: 502 ALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 19/363 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKG---KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           M+ +G  P+ VTYNT++D   K+G   K+ +    + +M    + PN  T+N L+ G+CK
Sbjct: 226 MKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCK 285

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              +  A +  + M +    P++ TYN LING CN G LEEA  L  +M  L L P++VT
Sbjct: 286 DENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVT 345

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN LIN F +     EA K+ D++ +  + PN +T N MI  YCKEG +++   +  +M 
Sbjct: 346 YNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSML 405

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  P+  TYN LI   C+  +++ A  +++ M  KGLK + +T N ++  LC   K  
Sbjct: 406 DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSR 465

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  LLN     G   + V+Y TL+ GY  + K   AL +   M++ +  P+  TYN +I
Sbjct: 466 NAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLI 525

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  +  K E A  +LNE+L+ G+ P+ TT++ +                  +M+EK F 
Sbjct: 526 KGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV----------------RLEMLEKGFS 569

Query: 358 PDI 360
           PDI
Sbjct: 570 PDI 572



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 195/360 (54%), Gaps = 3/360 (0%)

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           KEM   ++  ++ T+N  IN    +G+  +A   I+++   GI PN VT+N ++  YCK 
Sbjct: 189 KEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKR 248

Query: 164 G---KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           G   K+ KA   ++ M  N   P+ VT+NTLID  CK  N+  A +  + M ++GLK N 
Sbjct: 249 GSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNI 308

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +T N++++ LC   KL+EA  L +     G   + V+Y  LI G+ + +    A K++D+
Sbjct: 309 VTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDD 368

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           + +++++P+  T+N MI    + G  E+   + + +L  G++P+ +T+N +I G C +  
Sbjct: 369 VSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQD 428

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           ++ A +  N+M  K  K D+VT NIL+ GLC+      A K        G   + VTYNT
Sbjct: 429 LQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNT 488

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+   C E +L+ A  + + ME+++  P+  TY  +     +  +LE A    + M+E G
Sbjct: 489 LMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 548



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 200/405 (49%), Gaps = 20/405 (4%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N L++   +  +  +   +  E+ +  I  N  T NI I   C+ GK++KA   + +M+ 
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 179 NGFSPDCVTYNTLIDANCK---AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
            G SP+ VTYNTL+D  CK   AG M +A   M  M    +  N +T NT++   C ++ 
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +  A        K+G   + V+Y +LI G   + K   A+ LWD+M    + P+  TYNA
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I G  +    ++A  + +++ +  ++P+  TFNT+I  +C EG +E+     + M+++ 
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P++ T N L++GLCR+  L+ A +       KG   D VTYN LI  LCK  +  +A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL+EM    L P+  TY  +       G+L+ A    + M +  K      QPN     
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK------QPNV---- 518

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                  ++Y+  I  +C   + + A  +  E  +KG+  N++TY
Sbjct: 519 -------VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 162/322 (50%), Gaps = 20/322 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G K++  + N +L  L  E K+ +   +     KR  + +  ++   I G  R  K N+A
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQ---SGKTEQAIDMLNELLQSGMIPDETTFNTI 331
               ++MK   I P+  TYN ++ G  +   +GK  +A   + E+L + + P+E TFNT+
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTL 279

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I GFC +  V  A +   +M ++  KP+IVT N L++GLC  G LE+A+  +   +  G 
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             + VTYN LI+  CK++ +++A  +  ++ +++L P+  T+  +  A  + G +EE   
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFS 399

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             S M++ G      + PN S           +Y+  I   C +   + A ++  E   K
Sbjct: 400 LCSSMLDEG------ILPNVS-----------TYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 512 GIAINKSTYMNLMNGLIKRRKS 533
           G+  +  TY  L++GL K  KS
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKS 464



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 21/292 (7%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L+  Y ++ + + A + +   K+     S  + N ++  L +  K      +  E+++  
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI---LE 377
           +  +  TFN  I+G C  G++ KA      M      P++VT N L+ G C+ G    + 
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           KA  F +  +      + VT+NTLI   CK+  +  A     EM+++ L P+  TY ++ 
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315

Query: 438 TALVESGRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEEID 479
             L  +G+LEEA      MV  G                  K+  +  +     + +E+ 
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           P+ I+++  I+ +C +G  ++   +      +GI  N STY  L+ GL +++
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQ 427


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 197/358 (55%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
            TYN L+  YC+ G L+EA  +++ M      P ++TYN +ING C  G    A  +  E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M ++ L PD  TYNTL+          EA ++  E+   G+ P+ V+ + ++  + +   
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +D+A    R+M++ G  PD V Y  L+   C+ GNM EA ++ D M  +G  ++ I  NT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           IL+ LC EK L +A  L +   +RG   D  ++ TLI G+ +D    +AL L+  M +R 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I P    YN +I G  + G+ E+A ++ + ++   + P+  T+  +I+ +CS G V +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           +  + M+EK  KP +VTCN ++ G CR G   KA +F    I KG A D ++YNTLI+
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 190/377 (50%), Gaps = 17/377 (4%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           +VTYNTLI  +   G   EAF++++ + + G+KP+  T+N +I   CK+G+  +A  I+ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M   G SPD  TYNTL+  +C+  N  EA  +   M R+G+  + ++ ++++      +
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            LD+A +      K G   D V Y  L+ GY R+     ALK+ DEM E+  +     YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ GL +      A  + +E+++ G +PD  TF T+IHG C +G + KAL     M ++
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           + KPDIV  N L+ G C+ G +EKA + +   I +    + +TY  LI++ C    + +A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           F L   M EK + P   T   +      SG   +A +F   M+  G              
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG-------------- 346

Query: 475 PEEIDPSSISYSEKINE 491
              + P  ISY+  IN+
Sbjct: 347 ---VAPDHISYNTLIND 360



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 188/358 (52%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYNT++ A  ++G L E  ++++ M  +GL P+  TYN +++G CK G    A  ++  
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      PD  TYN L+   C      EA  +  EM    ++PD+V++++L+  F  +  
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A     ++ + G+ P+ V + +++  YC+ G + +A KI   M E G   D + YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +++  CK   + +A ++ D M  +G   +  T  T++H  C +  + +A  L  + ++R 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y TLI G+ +  +  +A +LWD M  R+I P+  TY  +I      G   +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            + + +++ G+ P   T NT+I G+C  G   KA +F  +M+ K   PD ++ N L++
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 174/329 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TYN I++ L KKG+    + +L +M   GL P+ TTYN L+   C+     EA
Sbjct: 31  GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 90

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +   +PD+ +++ L+  +     L++A    ++M+   L+PD V Y  L++ 
Sbjct: 91  KEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 150

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G  +EA K+ DE+ E G   + + +N ++   CKE  +  A K+   M E G  PD
Sbjct: 151 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 210

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+ TLI  +C+ GNM +A  +   M ++ +K + +  NT++   C   ++++A  L +
Sbjct: 211 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 270

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R  + + ++YG LI  Y      + A +LWD M E+ I P+  T N +I G  +SG
Sbjct: 271 GMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 330

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            + +A + L  ++  G+ PD  ++NT+I+
Sbjct: 331 DSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 189/385 (49%), Gaps = 19/385 (4%)

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           VT+N +I  YC+EG +++A +I+ +M + G  P   TYN +I+  CK G    A  ++  
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M   GL  +T T NT+L   C      EA  +     ++G   D VS+ +L+  + R+  
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            ++AL  + +MK+  ++P    Y  ++ G  ++G   +A+ + +E+L+ G + D   +NT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           I++G C E  +  A +  ++MVE+   PD  T   L+ G C++G + KAL  F +   + 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D V YNTLI   CK   +E A  L   M  +K+ P+  TY  +  A    G + EA 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +   +M+E G                 I P+ ++ +  I  +C  G    A +       
Sbjct: 302 RLWDVMIEKG-----------------IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIA 344

Query: 511 KGIAINKSTYMNLMNGLIKRRKSIS 535
           KG+A +  +Y  L+N    +R+S++
Sbjct: 345 KGVAPDHISYNTLIND--GKRRSVA 367



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 178/352 (50%), Gaps = 18/352 (5%)

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYNTLI A C+ G +EEAF +M+ M  KGLK +  T N I++ LC + +   A  +L  
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G   D  +Y TL+    R +  + A +++ EM  + ++P   ++++++   S++  
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            +QA+    ++ + G++PD   +  ++HG+C  G + +AL+  ++M+E+    D++  N 
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +L+GLC+E +L  A K F   + +G   D  T+ TLI   C++  +  A  L   M ++ 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + PD   Y  +     + G +E+A +    M+                   +I P+ I+Y
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS-----------------RKIFPNHITY 284

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
              IN +CS G   +A ++++   +KGI     T   ++ G  +   S SKA
Sbjct: 285 GILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS-SKA 335



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 155/297 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TYNT+L    ++   +E +++  +M +QG+VP+  +++ L++ + +   
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+     M +   +PD   Y +L++G+C  G + EA ++R EM     + DV+ YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   +     +A KL DE+ E G  P+  T   +I  +C++G + KA  +   M +  
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V YNTLID  CK G ME+A  + D M  + +  N IT   +++  C    + EA+
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            L +   ++G     V+  T+I GY R   +++A +    M  + + P   +YN +I
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 125/228 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG +PDNV Y  ++    + G + E   +  +M +QG V +   YN +++G CK   
Sbjct: 132 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 191

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A ++ D M +  +LPD +T+  LI+G C  G + +A  L   M    + PD+V YNT
Sbjct: 192 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 251

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   +A +L D +    I PN +T+ I+I  YC  G + +A ++   M E G
Sbjct: 252 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 311

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
             P  VT NT+I   C++G+  +A   +  M  KG+  + I+ NT+++
Sbjct: 312 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 235/434 (54%), Gaps = 3/434 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C P+ V+Y  ++ AL      ++   LL  M+  G+  +  TY  L+ G C    + +A
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M ++   P+V  Y+ L+ G+C +G  E+  ++  EM    + PDVV Y  LI+ 
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G++ +A  ++D +   G++PN VT+N++I   CKEG + +A  +++ M E G +PD
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMD--VMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            VTYNTLI        M+EA  +++  V G+  +K N +T N+++  LC   ++ +A+ +
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                + G  ++ V+Y  LI G  R  K  +A++L DEM    + P +FTY+ +I G  +
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             + ++A D+L+ +   G+ P+   +  ++   C +G +E+A    N+M + +F  D+V 
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVA 468

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + ++ G C+ G L+ A +  +S + +G   D+VTY+ +I+   K   +E A G+L +M 
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528

Query: 423 EKKLGPDRYTYAAI 436
                PD   + ++
Sbjct: 529 ASGFLPDVAVFDSL 542



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 261/534 (48%), Gaps = 25/534 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ---GLVPNRTTYNILVSGYCK 57
           ++    + D V+YNT+L AL ++G  +    LL  M  +      PN  +Y +L+   C 
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
                +A+ ++  M       DV TY  LI G C+A  +++A  L  EM    + P+VV 
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y++L+  + +SGR  +  K+  E+ E GI+P+ V +  +I   CK GK  KA  ++  M 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  P+ VTYN LI+  CK G+++EA  ++  M  KG+  + +T NT++  L    ++D
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 238 EAYMLLNSASKRGYYL---DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           EA  LL     RG  +   + V++ ++I G     +  +A ++   M+E   M +  TYN
Sbjct: 308 EAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL +  K  +A+++++E+   G+ PD  T++ +I GFC   QV++A    + M ++
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             +P++     LL  +C +G++E+A   F   +     +D V Y+T+I   CK   L+ A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL  + ++ L PD  TY+ +     +SG +E A      M  +G +            
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL------------ 533

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                P    +   I  + ++G     L++  E   K IA++      L   L+
Sbjct: 534 -----PDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 223/445 (50%), Gaps = 3/445 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D VTY T++  L    ++++  +L+ +M + G+ PN   Y+ L+ GYCK G 
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++  +V   M++    PDV  Y  LI+  C  G  ++A  +   M    L P+VVTYN 
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--EE 178
           LIN   + G   EA  ++ ++ E G+ P+ VT+N +IK      ++D+A  ++  M   +
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           N   P+ VT+N++I   C  G M +AF++  +M   G  +N +T N ++  L    K+ +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L++  +  G   D  +Y  LI G+ +  + +RA  L   M++R I P  F Y  ++ 
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLV 440

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            + + G  E+A ++ NE + +    D   ++T+IHG C  G ++ A +    +V++   P
Sbjct: 441 AMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTP 499

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT +I+++   + G +E A    +     G   D   +++LI     +  +     L+
Sbjct: 500 DAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI 559

Query: 419 SEMEEKKLGPDRYTYAAIHTALVES 443
            EM  K +  D    + + T+LV S
Sbjct: 560 REMITKNIALDSKIISTLSTSLVAS 584



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 233/480 (48%), Gaps = 26/480 (5%)

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME---SLKL 111
           + +L  L EA  ++D +    S+ D  +YN ++   C  G  + A  L + M        
Sbjct: 55  HLRLLPLGEATSLLDAL---PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPAC 111

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
            P+ V+Y  L+        + +A  L+  +   G++ + VT+  +I+  C   ++DKA +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           ++  M E+G  P+ V Y++L+   CK+G  E+  ++   M  KG++ + +    ++ +LC
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              K  +A+ +++   +RG   + V+Y  LI    ++     A+ +  +M E+ + P   
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMI--PDETTFNTIIHGFCSEGQVEKALQFHN 349
           TYN +I GLS   + ++A+ +L E+++   I  P+  TFN++I G C  G++ +A Q   
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M E     ++VT N+L+ GL R   + KA++        G   DS TY+ LI   CK  
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +++ A  LLS M ++ + P+ + Y  +  A+ E G +E A+   + M             
Sbjct: 412 QVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM------------- 458

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             +  P ++    ++YS  I+  C  G  K A ++ +    +G+  +  TY  ++N   K
Sbjct: 459 -DNNFPLDV----VAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 20/178 (11%)

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAV---DSVTYNTLISSLCKERRLEDAF 415
           D V+ N +L+ LCR G  ++A    R+  L+       ++V+Y  L+ +LC +R  + A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
           GLL  M    +  D  TY  +   L ++  +++A +    M E+G               
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG--------------- 180

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             I+P+ + YS  +  +C  GR++D  ++F E  +KGI  +   Y  L++ L K  K+
Sbjct: 181 --IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 229/422 (54%), Gaps = 3/422 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V ++ +L  + K    + V  L   M+  G+  +  +YNI+++  C+      A+ 
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           VV  M +    PDV T + LING+C    + +A  L  +ME +   PDVV YNT+I+   
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   +A +L D ++  G++ +AVT+N ++   C  G+   A +++R+M      P+ +
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+  +ID   K G   EA ++ + M R+ +  +  T N++++ LC   ++DEA  +L+  
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   D V+Y TLI G+ + ++ +   KL+ EM +R ++  T TYN +I G  Q+G+ 
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A ++ + +      P+  T++ +++G C   +VEKAL     M +   + DI T NI+
Sbjct: 307 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 363

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E A   FRS   KG   D V+Y T+IS  C++R+ + +  L  +M+E  L
Sbjct: 364 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 423

Query: 427 GP 428
            P
Sbjct: 424 LP 425



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 207/384 (53%), Gaps = 3/384 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  +YN +++ L +  +      ++  M K G  P+  T + L++G+C+   
Sbjct: 36  MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 95

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +V  M +    PDV  YN +I+G C  G++ +A  L   ME   +  D VTYN+
Sbjct: 96  VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 155

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     SGR  +A +L+ ++    I PN +T   +I  + KEGK  +A K+   M    
Sbjct: 156 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+LI+  C  G ++EA +M+D+M  KG   + +T NT+++  C  K++DE  
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 275

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    ++RG   D ++Y T+I GYF+  + + A +++  M  R   P+  TY+ +++GL
Sbjct: 276 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 332

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + + E+A+ +   + +S +  D TT+N +IHG C  G VE A      +  K  KPD+
Sbjct: 333 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 392

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           V+   ++SG CR+   +K+   +R
Sbjct: 393 VSYTTMISGFCRKRQWDKSDLLYR 416



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 210/422 (49%), Gaps = 32/422 (7%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M Q++ LP +  ++ +++    +   +    L   ME   +  D+ +YN +IN      R
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            + A  ++ ++ + G +P+ VT + +I  +C+  ++  A  +V  MEE GF PD V YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +ID +CK G + +A  + D M R G++ + +T N+++  LCC  +  +A  L+     R 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + +++  +I  + ++ K + A+KL++EM  R + P  FTYN++I GL   G+ ++A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF-------------- 356
            ML+ ++  G +PD  T+NT+I+GFC   +V++  +   +M ++                
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 357 ------------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
                             +P+I T +ILL GLC    +EKAL  F +       +D  TY
Sbjct: 301 FQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 360

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           N +I  +CK   +EDA+ L   +  K L PD  +Y  + +      + +++      M E
Sbjct: 361 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420

Query: 459 TG 460
            G
Sbjct: 421 DG 422



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 212/421 (50%), Gaps = 20/421 (4%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
           LP +V ++ ++++  +S        L   ++  GI  +  ++NI+I   C+  +   A  
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           +V  M + G+ PD VT ++LI+  C+   + +A  ++  M   G + + +  NTI+   C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
               +++A  L +   + G   D V+Y +L+ G     + + A +L  +M  R I+P+  
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T+ A+I    + GK  +A+ +  E+ +  + PD  T+N++I+G C  G+V++A Q  + M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           V K   PD+VT N L++G C+   +++  K FR    +G   D++TYNT+I    +  R 
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           + A  + S M+ +   P+  TY+ +   L  + R+E+A                V+  N 
Sbjct: 307 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL---------------VLFENM 348

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            K+  E+D ++  Y+  I+  C  G  +DA  +F     KG+  +  +Y  +++G  ++R
Sbjct: 349 QKSEIELDITT--YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 406

Query: 532 K 532
           +
Sbjct: 407 Q 407


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 235/451 (52%), Gaps = 2/451 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G  C P++VT++ ++D   K G + E   LL +M+K GL  +   Y+ L+SG+C  G 
Sbjct: 190 MKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGD 249

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++    + + M +    P+V TY+ L+N  C     +EA ++   M   K+ PDVV Y  
Sbjct: 250 IERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTV 309

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L +   ++GR+ +A K++D + + G +PN VT+N +I   CKEG++D A  I+  M + G
Sbjct: 310 LADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMNTITLNTILHTLCCEKKLDE 238
             PD VTY+TL+   C  G ++EA  +++++  K   +K +    N ++  LC +++L  
Sbjct: 370 KKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRH 429

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +  +  +RG+  + V+Y  LI GY    K  +AL+LW +  +  I P+  TY  +I 
Sbjct: 430 AKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL +      A  + N+   SG  P  + +NT++   C E  VE+A     +M   +  P
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP 549

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+V+ NI++ G  + G +E A +     +      D++T++ LI+   K  +L++A  L 
Sbjct: 550 DVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLY 609

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
             M      PD   + ++       G+ E+ 
Sbjct: 610 ERMVSCGHVPDAVLFDSLLKGYSLKGKTEKV 640



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 243/463 (52%), Gaps = 2/463 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V+YNT+++ L K  +L E ++L  +MK     PN  T++ L+ G+CK G ++E   
Sbjct: 161 IPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFG 220

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +++ M +     DV+ Y+ LI+G+C+ G +E    L  EM    + P+VVTY+ L+N   
Sbjct: 221 LLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALC 280

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +  +  EA +++D +    ++P+ V + ++     K G+   A K++  M + G  P+ V
Sbjct: 281 KKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNV 340

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN +I+  CK G +++A  +++ M +KG K + +T +T++  LC   K+DEA  LLN  
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400

Query: 247 SKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             + +++  D  ++  +I    +  +   A +++  M ER    +  TYN +I G   +G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K  +A+++  + + SG+ P+  T+  +I+G C    +  A    NK      +P +   N
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++ LCRE  +E+A   F+         D V++N +I    K   +E A  LL EM   
Sbjct: 521 TLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNM 580

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            L PD  T++ +    ++ G+L+EA      MV  G +   V+
Sbjct: 581 NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVL 623



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 266/546 (48%), Gaps = 20/546 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M      P   + + ++++     K +    +L  + K+G   N   +N+L+ G+C+ G 
Sbjct: 85  MASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGD 144

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +AM +  +M +N  +PD  +YN +ING C    L EA  L KEM+  +  P+ VT++ 
Sbjct: 145 SHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSA 204

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++G   E F L++E+++ G++ +   ++ +I  +C +G I++  ++   M    
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY+ L++A CK    +EA +M+D M    ++ + +    +   L    +  +A 
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+   KRG   + V+Y  +I G  ++ + + AL + + M ++   P   TY+ ++ GL
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384

Query: 301 SQSGKTEQAIDMLNELLQS--GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
              GK ++A+D+LN L+     + PD   FN +I   C + ++  A + +  MVE+ F  
Sbjct: 385 CGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPS 444

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +IVT NIL+ G    G L KAL+ ++  +  G + ++ TY  LI+ LCK + L  A GL 
Sbjct: 445 NIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKT 474
           ++       P    Y  +  +L     +E+A+     M         ++  ++   T K 
Sbjct: 505 NKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKA 564

Query: 475 PE--------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
            +               + P +I++S  IN     G+  +A  ++E     G   +   +
Sbjct: 565 GDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLF 624

Query: 521 MNLMNG 526
            +L+ G
Sbjct: 625 DSLLKG 630



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 256/525 (48%), Gaps = 19/525 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P   + NT++D L K    + V  + S M    + P  T+ + L+  +        A  
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+ L+ +     +V+ +N+L+ G+C +G   +A  L   M+   L+PD V+YNT+IN   
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +  R +EA +L  E+     KPN+VT + +I  +CK G +++   ++  ME+ G   D  
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ LI   C  G++E    + + M RK +  N +T + +++ LC ++K  EA  +L++ 
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           +      D V+Y  L  G  ++ +A+ A+K+ D M +R   P+  TYNA+I GL + G+ 
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF--KPDIVTCN 364
           + A+ +L  + + G  PD  T++T++ G C  G++++A+   N ++ K F  KPD+   N
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++  LC++  L  A + + + + +G   + VTYN LI       +L  A  L  +  + 
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  TY  +   L          K   + +  G  N         K      P+   
Sbjct: 476 GISPNAATYTVLINGLC---------KMQMLSIAKGLFN--------KKRASGTRPTVSE 518

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  +   C +   + A  +F+E R      +  ++  +++G +K
Sbjct: 519 YNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLK 563



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 230/466 (49%), Gaps = 20/466 (4%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           S+P   + N LI+    A   +    +  +M S+ + P   + + LI  F  + +   AF
Sbjct: 55  SIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAF 114

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            ++  + + G   N    N+++K +C+ G   KA  +   M+ N   PDCV+YNT+I+  
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK   + EA  +   M     K N++T + ++   C    ++E + LL    K G   D 
Sbjct: 175 CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
             Y  LI+G+       R  +L++EM  + + P+  TY+ ++  L +  K ++A  ML+ 
Sbjct: 235 FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +    + PD   +  +  G    G+   A++  + MV++  +P+ VT N +++GLC+EG 
Sbjct: 295 MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK--LGPDRYTY 433
           ++ AL    +   KGK  D VTY+TL+  LC   ++++A  LL+ +  K+  + PD + +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +   L +  RL  A++    MVE G              P  I    ++Y+  I+ + 
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVERG-------------FPSNI----VTYNILIDGYL 457

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK-SISKAV 538
           S G+   AL+++++    GI+ N +TY  L+NGL K +  SI+K +
Sbjct: 458 SAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGL 503



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 200/401 (49%), Gaps = 2/401 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY+ +++AL KK K  E   +L  M    + P+   Y +L  G  K G   +A++V
Sbjct: 267 PNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKV 326

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +DLM +    P+  TYN +ING C  G +++A  + + M      PDVVTY+TL+     
Sbjct: 327 LDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCG 386

Query: 128 SGRSMEAFKLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            G+  EA  L++ L   E  IKP+    N++I+  CK+ ++  A ++   M E GF  + 
Sbjct: 387 VGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNI 446

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN LID    AG + +A  +       G+  N  T   +++ LC  + L  A  L N 
Sbjct: 447 VTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK 506

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G       Y TL+    R+    +A  L+ EM+     P   ++N +I G  ++G 
Sbjct: 507 KRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGD 566

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E A ++L E+L   ++PD  TF+ +I+ F   GQ+++A   + +MV     PD V  + 
Sbjct: 567 VESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDS 626

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
           LL G   +G  EK +   +    K   +DS   +T+++ LC
Sbjct: 627 LLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLC 667



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           F   PD   +N ++  L K+ +L   + +   M ++G   N  TYNIL+ GY   G L +
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTK 464

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGML--------------------------- 96
           A+ +      +   P+  TY +LING C   ML                           
Sbjct: 465 ALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMA 524

Query: 97  --------EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                   E+A  L +EM +    PDVV++N +I+   ++G    A +L+ E+    + P
Sbjct: 525 SLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVP 584

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           + +T +I+I  + K G++D+A  +   M   G  PD V +++L+      G  E+   M+
Sbjct: 585 DNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSML 644

Query: 209 DVMGRKGLKMNTITLNTILHTLC 231
             M  K + +++   +TIL  LC
Sbjct: 645 QQMADKDVVLDSKLTSTILACLC 667


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 259/553 (46%), Gaps = 47/553 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD   Y T++  L   G+  E   LLSD   +G  PN   YN L+ GYC +G 
Sbjct: 168 MQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGD 227

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A+ V + M  N   P+V TY  LI+G+C +  L+ A  L   M    L+P+VVTY  
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G+   A++L+  ++  G+ PN  T +++I   CK  ++ +A  ++ ++ + G
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + Y +LID  CKAG    A R+M  +  +G   +  T ++++  LC +K+L EA 
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++L+   ++G     V+Y  +I    R+  A+ + K+ D+M    I P  FTY   +   
Sbjct: 408 LVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSY 467

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ E A  M+  ++  G+ P+  T+N +I G+ + G   +A      MV    KP+ 
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527

Query: 361 VTCNILLSGLCRE-----------------------GILEKALKFFRSWILKGKAVDSVT 397
            +  +LL  L ++                       G+LE+ +K     +     +D   
Sbjct: 528 ESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVK-----LQLPSEID--I 580

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN  ++SLC+  RL++A  LL EM+   L P    Y +I         L EA  F   MV
Sbjct: 581 YNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMV 640

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           ++G I                 P   SY   I+  C +G  + A Q+F +   K     +
Sbjct: 641 KSGYI-----------------PQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEE 683

Query: 518 STYMNLMNGLIKR 530
             +  L++GL+++
Sbjct: 684 IAWRILIDGLLQK 696



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 215/449 (47%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY T+++A    G L   +  LS + + G  P+   Y   V GYC+ G L  A R+  LM
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                +   +TY  L++G C AGM+ EA  +   M++    PD   Y T+++    +GR+
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L+ +    G +PN V +N +I  YC  G ++ A  +   M+ NG SP+  TY  L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CK+  ++ A  +   M   GL  N +T   ++   C + +LD AY LL S    G 
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +E +   LI    + E+   A  L   + ++ I  +   Y ++I GL ++G+   A  
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++  L+  G +PD  T++++I G C + ++ +A+   + M+EK  +P  VT  I++  L 
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           RE   + + K     I  G   D  TY   + S C E R+EDA  ++  M +  + P+  
Sbjct: 434 REVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLV 493

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY A+       G   +A      MV  G
Sbjct: 494 TYNALICGYANLGLTSQAFSTFKHMVANG 522



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 236/523 (45%), Gaps = 7/523 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+  Y + +    + G L     L   M  +G V    TY  L+ G C  G ++EA
Sbjct: 102 GFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREA 161

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M  +   PD   Y  +++G C AG   EA  L  +  +    P+VV YN LI+ 
Sbjct: 162 MSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G    A  + + +D +G  PN  T+  +I  +CK  K+D+A  +   M + G  P+
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  LI   C  G ++ A+R++  M   GL  N  T + ++  LC  +++ EA +LL 
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLG 341

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G  ++E+ Y +LI G  +  +   A +L   +  +  +P   TY+++I GL +  
Sbjct: 342 SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK 401

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A+ +L+++++ G+ P   T+  II     E   + + +  +KM+    KPD+ T  
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYT 461

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I +   C EG +E A       +  G   + VTYN LI           AF     M   
Sbjct: 462 IFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN 521

Query: 425 KLGPDRYTYAAIHTALV--ESGRLEEAQKFTSIMVETGKINHQVVQPNTS-KTPEEIDPS 481
              P+  +Y  +   L+  ES     A   +   +   K  H +++     + P EID  
Sbjct: 522 GCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEID-- 579

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
              Y+  +   C   R  +A  +  E +   +  ++  Y +++
Sbjct: 580 --IYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSII 620



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 229/520 (44%), Gaps = 21/520 (4%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  L AL +   L ++    S M  +    N  TY  L++ YC  G L  + R +  + +
Sbjct: 45  NAFLMALARHRMLADMESFASRMPAR----NLRTYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               PD   Y   + G+C AG+L  A RL   M     +    TY  L++    +G   E
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  +   +   G  P+   +  M+   C  G+  +A  ++ +    GF P+ V YN LID
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C  G++E A  + + M   G   N  T   ++   C  +KLD A ML +     G   
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + V+Y  LI G   D + + A +L   M+   ++P+ +T + +I  L +  +  +A  +L
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             L+Q G+  +E  + ++I G C  G+   A +    +V + F PD  T + L+ GLCR+
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQ 400

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             L +A+      + KG     VTY  +I  L +E   + +  +L +M    + PD +TY
Sbjct: 401 KELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTY 460

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
                +    GR+E+A+     MV+ G                 + P+ ++Y+  I  + 
Sbjct: 461 TIFVRSYCHEGRMEDAEHMMLHMVDHG-----------------VCPNLVTYNALICGYA 503

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           + G    A   F+     G   N+ +Y  L+  LIK+  S
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS 543



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 217/502 (43%), Gaps = 51/502 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC P+  TY  ++    K  KL+    L S M   GLVPN  TY  L+ G C  G 
Sbjct: 238 MDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQ 297

Query: 61  LKEAMRVVDLMTQNKSLPDVWT-----------------------------------YNM 85
           L  A R++  M  +  +P+ WT                                   Y  
Sbjct: 298 LDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTS 357

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI+G C AG    A RL + + S   +PD  TY++LI+         EA  ++D++ E G
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           ++P+ VT+ I+I    +E   D + KI+  M   G  PD  TY   + + C  G ME+A 
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            MM  M   G+  N +T N ++          +A+         G   +E SY  L+   
Sbjct: 478 HMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLL 537

Query: 266 FRDEKANR----ALKLW------------DEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
            + E +N     ++ +W            +EM + Q+      YN  +  L +  + ++A
Sbjct: 538 IKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEA 597

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +L E+  + + P E  + +II   C    + +AL F + MV+  + P + +   ++S 
Sbjct: 598 KILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISS 657

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC EG ++ A + F   + K    + + +  LI  L ++  + +   LLS MEEK   P 
Sbjct: 658 LCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPS 717

Query: 430 RYTYAAIHTALVESGRLEEAQK 451
              YA +   + ++  ++E  +
Sbjct: 718 DALYARLTGKITDANDIQEIAR 739


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 263/521 (50%), Gaps = 19/521 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V+ + +L+   +  K      +L+ M K+G   N   YNIL+ G C+     +A+ ++  
Sbjct: 108 VSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLRE 167

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M QN  +PDV +YN +I G+C    LE+A +L  EM+       +VT+  LI+ F ++G+
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA  L+ E+   G++ + + +  +I+ +C  G++D+   +   + E G SP  +TYNT
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   CK G ++EA  + + M  +G++ N  T   ++  LC   K  EA  LLN   ++ 
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V+Y  +I    +D     AL++ + MK+R+  P   TYN+++ GL   G  ++A 
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEAS 407

Query: 311 DMLNELLQ--SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            +L  +L+  S   PD  +FN +IHG C   ++ +AL  ++ +VEK    DIVT NILL+
Sbjct: 408 KLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLN 467

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
              + G + KA++ ++         +S TY T+I   CK   L  A GLL +M   +L P
Sbjct: 468 STLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPP 527

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
             + Y  + ++L + G L++A +             + +Q + S       P  IS++  
Sbjct: 528 SVFDYNCLLSSLCKKGTLDQAWRL-----------FEEMQRDDSF------PDVISFNIM 570

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+     G  K A  +       G++ +  TY  L+N  +K
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLK 611



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 233/456 (51%), Gaps = 2/456 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V+YNT++    +  +L +   L ++M+  G   +  T+ IL+  +CK G + EAM 
Sbjct: 174 MPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M       D+  Y  LI G+C+ G L+    L  E+      P  +TYNTLI  F 
Sbjct: 234 LLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + GR  EA ++ + + E G++PN  T+  +I   C  GK  +A +++  M +    P+ V
Sbjct: 294 KLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVV 353

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN +I+  CK   + +A  ++++M ++  + + IT N++L  LC +  LDEA  LL   
Sbjct: 354 TYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM 413

Query: 247 SKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            K   Y D   +S+  LI G  +  + ++AL ++D + E+       T N ++    +SG
Sbjct: 414 LKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSG 473

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A+++  ++  S ++P+  T+ T+I GFC  G +  A     KM      P +   N
Sbjct: 474 DVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYN 533

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LLS LC++G L++A + F          D +++N +I    K   ++ A  LL  M   
Sbjct: 534 CLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHA 593

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L PD +TY+ +    ++ G L+EA  F   M+++G
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSG 629



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 233/460 (50%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G GC    VT+  ++DA  K GK++E   LL +MK +GL  +   Y  L+ G+C  G 
Sbjct: 203 MQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGE 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L     + D + +    P   TYN LI G+C  G L+EA  + + M    + P+V TY  
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTG 322

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G++ EA +L++ + +   +PN VT+NI+I   CK+  +  A +IV  M++  
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRR 382

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLNTILHTLCCEKKLDE 238
             PD +TYN+L+   C  G+++EA +++ +M +       + I+ N ++H LC   +L +
Sbjct: 383 TRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQ 442

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  + +   ++    D V+   L+    +    N+A++LW ++   +I+P++ TY  MI 
Sbjct: 443 ALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMID 502

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  ++G    A  +L ++  S + P    +N ++   C +G +++A +   +M      P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFP 562

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+++ NI++ G  + G ++ A          G + D  TY+ LI+   K   L++A    
Sbjct: 563 DVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +M +    PD +   ++    +  G  ++  +F   +V+
Sbjct: 623 DKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVD 662



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 223/454 (49%), Gaps = 20/454 (4%)

Query: 97  EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
           E AF   ++M       + V+ + L+  F +  ++  A  ++  + + G   N   +NI+
Sbjct: 89  EVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNIL 148

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +K  C+  +  KA  ++R M +N   PD V+YNT+I   C+   +E+A ++ + M   G 
Sbjct: 149 LKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGC 208

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             + +T   ++   C   K+DEA  LL     +G   D + Y +LI G+    + +R   
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKA 268

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L+DE+ ER   P   TYN +I G  + G+ ++A ++   +++ G+ P+  T+  +I G C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLC 328

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G+ ++ALQ  N M++K  +P++VT NI+++ LC++ ++  AL+       +    D++
Sbjct: 329 GVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNI 388

Query: 397 TYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           TYN+L+  LC +  L++A  LL  M  +     PD  ++ A+   L +  RL +A     
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYD 448

Query: 455 IMVE---TGKI-------NHQVVQPNTSKTPE--------EIDPSSISYSEKINEHCSQG 496
           ++VE    G I       N  +   + +K  E        +I P+S +Y+  I+  C  G
Sbjct: 449 LLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTG 508

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
               A  +  + R   +  +   Y  L++ L K+
Sbjct: 509 MLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 185/365 (50%), Gaps = 3/365 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  ++D L   GK  E   LL+ M ++   PN  TYNI+++  CK   + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
           + +V+LM + ++ PD  TYN L+ G C  G L+EA +L   M  +S    PDV+++N LI
Sbjct: 372 LEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALI 431

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   +  R  +A  + D L E     + VT NI++    K G ++KA ++ + +  +   
Sbjct: 432 HGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIV 491

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+  TY T+ID  CK G +  A  ++  M    L  +    N +L +LC +  LD+A+ L
Sbjct: 492 PNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRL 551

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                +   + D +S+  +I G  +      A  L   M    + P  FTY+ +I    +
Sbjct: 552 FEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLK 611

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI-V 361
            G  ++AI   ++++ SG  PD    ++++    S+G+ +K  +F  K+V+K    D  +
Sbjct: 612 LGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKEL 671

Query: 362 TCNIL 366
           TC ++
Sbjct: 672 TCTVM 676



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P++ TY T++D   K G LN  + LL  M+   L P+   YN L+S  CK G L +A R
Sbjct: 491 VPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWR 550

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + + M ++ S PDV ++N++I+G   AG ++ A  L   M    L PD+ TY+ LINRF 
Sbjct: 551 LFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFL 610

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   EA    D++ + G +P+A   + ++K+   +G+ DK  + V+ + +     D  
Sbjct: 611 KLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKE 670

Query: 187 TYNTLIDANC-KAGNMEEAFRMMDVMGRK 214
              T++D  C  +GNM+ A R++ V   K
Sbjct: 671 LTCTVMDYMCSSSGNMDIAKRLLRVADDK 699



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 1/242 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D VT N +L++  K G +N+  +L   +    +VPN  TY  ++ G+CK G L  A  ++
Sbjct: 458 DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLL 517

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M  ++  P V+ YN L++  C  G L++A+RL +EM+     PDV+++N +I+   ++
Sbjct: 518 CKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKA 577

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A  L+  +   G+ P+  T++ +I  + K G +D+A      M ++GF PD    
Sbjct: 578 GDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHIC 637

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK-KLDEAYMLLNSAS 247
           ++++      G  ++    +  +  K + ++     T++  +C     +D A  LL  A 
Sbjct: 638 DSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVAD 697

Query: 248 KR 249
            +
Sbjct: 698 DK 699


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 235/434 (54%), Gaps = 3/434 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C P+ V+Y  ++ AL      ++   LL  M+  G+  +  TY  L+ G C    + +A
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  M ++   P+V  Y+ L+ G+C +G  E+  ++  EM    + PDVV Y  LI+ 
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G++ +A  ++D +   G++PN VT+N++I   CKEG + +A  +++ M E G +PD
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMD--VMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            VTYNTLI        M+EA  +++  V G+  +K N +T N+++  LC   ++ +A+ +
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                + G  ++ V+Y  LI G  R  K  +A++L DEM    + P +FTY+ +I G  +
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             + ++A D+L+ +   G+ P+   +  ++   C +G +E+A    N+M + +F  D+V 
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVA 468

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + ++ G C+ G L+ A +  +S + +G   D+VTY+ +I+   K   +E A G+L +M 
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528

Query: 423 EKKLGPDRYTYAAI 436
                PD   + ++
Sbjct: 529 ASGFLPDVAVFDSL 542



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 261/534 (48%), Gaps = 25/534 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ---GLVPNRTTYNILVSGYCK 57
           ++    + D V+YNT+L AL ++G  +    LL  M  +      PN  +Y +L+   C 
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
                +A+ ++  M       DV TY  LI G C+A  +++A  L  EM    + P+VV 
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y++L+  + +SGR  +  K+  E+ E GI+P+ V +  +I   CK GK  KA  ++  M 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  P+ VTYN LI+  CK G+++EA  ++  M  KG+  + +T NT++  L    ++D
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 238 EAYMLLNSASKRGYYL---DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           EA  LL     RG  +   + V++ ++I G     +  +A ++   M+E   M +  TYN
Sbjct: 308 EAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL +  K  +A+++++E+   G+ PD  T++ +I GFC   QV++A    + M ++
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             +P++     LL  +C +G++E+A   F   +     +D V Y+T+I   CK   L+ A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL  + ++ L PD  TY+ +     +SG +E A      M  +G +            
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL------------ 533

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                P    +   I  + ++G     L++  E   K IA++      L   L+
Sbjct: 534 -----PDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 223/445 (50%), Gaps = 3/445 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D VTY T++  L    ++++  +L+ +M + G+ PN   Y+ L+ GYCK G 
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++  +V   M++    PDV  Y  LI+  C  G  ++A  +   M    L P+VVTYN 
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--EE 178
           LIN   + G   EA  ++ ++ E G+ P+ VT+N +IK      ++D+A  ++  M   +
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           N   P+ VT+N++I   C  G M +AF++  +M   G  +N +T N ++  L    K+ +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L++  +  G   D  +Y  LI G+ +  + +RA  L   M++R I P  F Y  ++ 
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLV 440

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            + + G  E+A ++ NE + +    D   ++T+IHG C  G ++ A +    +V++   P
Sbjct: 441 AMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTP 499

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT +I+++   + G +E A    +     G   D   +++LI     +  +     L+
Sbjct: 500 DAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI 559

Query: 419 SEMEEKKLGPDRYTYAAIHTALVES 443
            EM  K +  D    + + T+LV S
Sbjct: 560 REMITKNIALDSKIISTLSTSLVAS 584



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 233/480 (48%), Gaps = 26/480 (5%)

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME---SLKL 111
           + +L  L EA  ++D +    S+ D  +YN ++   C  G  + A  L + M        
Sbjct: 55  HLRLLPLGEATSLLDAL---PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPAC 111

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
            P+ V+Y  L+        + +A  L+  +   G++ + VT+  +I+  C   ++DKA +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           ++  M E+G  P+ V Y++L+   CK+G  E+  ++   M  KG++ + +    ++ +LC
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              K  +A+ +++   +RG   + V+Y  LI    ++     A+ +  +M E+ + P   
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMI--PDETTFNTIIHGFCSEGQVEKALQFHN 349
           TYN +I GLS   + ++A+ +L E+++   I  P+  TFN++I G C  G++ +A Q   
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M E     ++VT N+L+ GL R   + KA++        G   DS TY+ LI   CK  
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +++ A  LLS M ++ + P+ + Y  +  A+ E G +E A+   + M             
Sbjct: 412 QVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM------------- 458

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             +  P ++    ++YS  I+  C  G  K A ++ +    +G+  +  TY  ++N   K
Sbjct: 459 -DNNFPLDV----VAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 20/178 (11%)

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAV---DSVTYNTLISSLCKERRLEDAF 415
           D V+ N +L+ LCR G  ++A    R+  L+       ++V+Y  L+ +LC +R  + A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
           GLL  M    +  D  TY  +   L ++  +++A +    M E+G               
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG--------------- 180

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             I+P+ + YS  +  +C  GR++D  ++F E  +KGI  +   Y  L++ L K  K+
Sbjct: 181 --IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 265/540 (49%), Gaps = 19/540 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  T   +++A  K GK+    + + +M+K G   N  +YN LV GY  LG ++ A  
Sbjct: 63  VPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKG 122

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINRF 125
           V+  M++   + +  T  +LI G+C    +EEA ++ +EME    ++ D   Y  LI+ +
Sbjct: 123 VLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGY 182

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G+  +A ++ DE+ + G+K N    N +I  YCK G++ +  +++  M +    PD 
Sbjct: 183 CKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDS 242

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            +Y TL+D  C+ G   +AF + D M RKG++   +T NT+L  LC      +A  L + 
Sbjct: 243 YSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHL 302

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG   +EV Y TL+ G F+    +RAL LWD++  R I  S + +N MI GL + G+
Sbjct: 303 MLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGE 362

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A +    + + G  PD  T+ T+  G+C  G VE+A +   KM ++   P I   N 
Sbjct: 363 MDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNS 422

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GL     + K +        +G + + VTY  LI+  C + RL+ AF    EM  K 
Sbjct: 423 LIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKG 482

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI-NHQVVQPNTSKTPEEID----- 479
             P+    + I ++L   GR++EA      MV+   + +H+ ++   +    ++D     
Sbjct: 483 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIA 542

Query: 480 ------------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                       P+++ Y+  +   C  G+  DA + F          +  TY  L++G 
Sbjct: 543 DTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGF 602



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 249/502 (49%), Gaps = 18/502 (3%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           IL    +KG +     +  +M K G  P+  + N L+S   K G    A+ V D M +  
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
            +PDV+T  +++N +C AG +E A    +EME L    + V+YN+L++ +   G    A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-ENGFSPDCVTYNTLIDA 194
            ++  + E G+  N VT  ++IK YCK+ K+++A K++R ME E+G   D   Y  LID 
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            CK G M +A R+ D M + GLKMN    N++++  C   ++ E   LL    K     D
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             SY TL+ GY RD  +++A  + D+M  + I P+  TYN ++ GL + G  + A+ + +
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH 301

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            +LQ G+ P+E  + T++ G    G   +AL   + ++ +     I   N +++GLC+ G
Sbjct: 302 LMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMG 361

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            ++ A + F+     G   D +TY TL    CK   +E+AF +  +ME++++ P    Y 
Sbjct: 362 EMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYN 421

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
           ++   L  S ++ +     + M   G                 + P+ ++Y   I   C 
Sbjct: 422 SLIVGLFTSKKISKLIDLLAEMDTRG-----------------LSPNVVTYGALIAGWCD 464

Query: 495 QGRYKDALQIFEETRQKGIAIN 516
           QGR   A   + E   KG A N
Sbjct: 465 QGRLDKAFSAYFEMIGKGFAPN 486



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 268/561 (47%), Gaps = 53/561 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKE 63
           G + + VT   ++    K+ K+ E   +L +M+K+ G+V +   Y  L+ GYCK+G + +
Sbjct: 131 GVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGD 190

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+RV D M +     +++  N LING+C  G + E  RL   M  L L PD  +Y TL++
Sbjct: 191 AIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVD 250

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +   G S +AF + D++   GI+P  VT+N ++K  C+ G    A ++   M + G +P
Sbjct: 251 GYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTP 310

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V Y TL+D   K G+   A  + D +  +G+  +    NT+++ LC   ++D A    
Sbjct: 311 NEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETF 370

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   D ++Y TL  GY +      A K+ ++M++ +I PS   YN++I GL  S
Sbjct: 371 KRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTS 430

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K  + ID+L E+   G+ P+  T+  +I G+C +G+++KA   + +M+ K F P+++ C
Sbjct: 431 KKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIIC 490

Query: 364 NILLSGLCREG-------ILEKALKF-------------------FRSW---------IL 388
           + ++S L R G       +L+K + F                      W          +
Sbjct: 491 SKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAI 550

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           K    ++V YN  ++ LCK  ++ DA      +      PD +TY  +      +G + E
Sbjct: 551 KFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNE 610

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      MV  G +                 P+  +Y+  +N  C  G    A ++F++ 
Sbjct: 611 AFNLRDEMVNKGLV-----------------PNITTYNALLNGLCKSGYLDRARRLFDKL 653

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
             KG+  N  TY  L++G  K
Sbjct: 654 HLKGLIPNVVTYNILIDGYCK 674



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 250/489 (51%), Gaps = 13/489 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V Y T+LD LFK G  +    L  D+  +G+  +   +N +++G CK+G +  A
Sbjct: 307 GVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGA 366

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
                 M +    PD  TY  L +G+C  G +EEAF+++++ME  ++ P +  YN+LI  
Sbjct: 367 KETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVG 426

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F S +  +   L+ E+D  G+ PN VT+  +I  +C +G++DKA      M   GF+P+
Sbjct: 427 LFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPN 486

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL----NTILHTLCCEKKLDEAY 240
            +  + ++ +  + G ++EA  ++  M    L ++   L    N  +  L C K  D   
Sbjct: 487 VIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADT-- 544

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+ ++ +    + V Y   + G  +  K N A + +  +      P  FTY  +I G 
Sbjct: 545 --LDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGF 602

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S +G   +A ++ +E++  G++P+ TT+N +++G C  G +++A +  +K+  K   P++
Sbjct: 603 SAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNV 662

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT NIL+ G C+ G   +AL      + +G +   +TY++LI+  CK+  +E+A  LL+E
Sbjct: 663 VTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNE 722

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM----VETGKINH-QVVQPNTSKTP 475
           M+   +     T++ +    ++ G +++  K  ++M       G  +H Q+     S   
Sbjct: 723 MKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQMELSELSNAK 782

Query: 476 EEIDPSSIS 484
           E +D  +IS
Sbjct: 783 EMLDSYTIS 791



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 184/389 (47%), Gaps = 41/389 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC PD +TY T+ D   K G + E   +   M+K+ + P+   YN L+ G   L  
Sbjct: 373 MEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVG---LFT 429

Query: 61  LKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            K+  +++DL+ +  +    P+V TY  LI GWC+ G L++AF    EM      P+V+ 
Sbjct: 430 SKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVII 489

Query: 118 YNTLINRFFESGRSMEA--------------------------------FKLIDELDEHG 145
            + +++  +  GR  EA                                +K+ D LDE  
Sbjct: 490 CSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESA 549

Query: 146 IK---PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           IK   PN V +NI +   CK GK++ A +    +    F+PD  TY TLI     AG + 
Sbjct: 550 IKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVN 609

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           EAF + D M  KGL  N  T N +L+ LC    LD A  L +    +G   + V+Y  LI
Sbjct: 610 EAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILI 669

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            GY +      AL L  +M +  I PS  TY+++I G  +    E+A+ +LNE+  S + 
Sbjct: 670 DGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVD 729

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKM 351
               TF+ ++ G    G V+K  + HN M
Sbjct: 730 QTIATFSKLVEGCIQHGDVKKMSKLHNMM 758


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 269/568 (47%), Gaps = 47/568 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +L++  ++ ++  V  L  DM   G+ P   T+N+L+   C    +  A  +
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M +    P+ +T+ +L+ G+C AG+ ++   L   MES  +LP+ V YNT+++ F  
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF----SP 183
            GR+ ++ KL++++ E G+ P+ VT N  I   CKEGK+  A +I  +ME + +     P
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TYN ++   CK G +E+A  + + +      ++  + N  L  L    K  EA  +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G      SY  L+ G  +    + A  +   MK   + P   TY  ++ G    
Sbjct: 350 KQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSV 409

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK + A  +L E++++  +P+  T N ++H   + G++ +A +   KM EK +  D VTC
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
           NI++ GLC  G L+KA++  +   + G A                        D +TY+T
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----------- 449
           L++ LCK  R  +A  L +EM  +KL PD   Y        + G++  A           
Sbjct: 530 LLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589

Query: 450 -----QKFTSIMVETGKINHQVVQPN---TSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
                + + S+++  G I +Q+ + +        + I P+  +Y+  I   C  G+ +DA
Sbjct: 590 CHKSLETYNSLILGLG-IKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDA 648

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + +E  QK IA N  ++  L+    K
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIGAFCK 676



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 253/522 (48%), Gaps = 47/522 (9%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  L  L + GK  E   +L  M  +G+ P+  +YNIL+ G CKLG L +A  +V LM
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N   PD  TY  L++G+C+ G ++ A  L +EM     LP+  T N L++  +  GR 
Sbjct: 388 KRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRI 447

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-------------- 177
            EA +L+ +++E G   + VT NI++   C  G++DKA +IV+ M               
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507

Query: 178 ---------ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
                    EN   PD +TY+TL++  CKAG   EA  +   M  + L+ +++  N  +H
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIH 567

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C + K+  A+ +L    K+G +    +Y +LI G     +      L DEM+E+ I P
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISP 627

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN  I  L + GK E A ++L+E++Q  + P+  +F  +I  FC      K   F 
Sbjct: 628 NICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFC------KVPDF- 680

Query: 349 NKMVEKSFKPDIVTC-------NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             M ++ F+  +  C       +++ + L   G L KA +   + + +G  + +  Y  L
Sbjct: 681 -DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           + SLCK+  LE A G+L +M +K  G D      +   L + G  +EA  F   M+E   
Sbjct: 740 VVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMAS 799

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           +          +   ++DP++    +K +   S   +++ L 
Sbjct: 800 V---------GEVANKVDPNATDIHQKKHNKYSGNNWQNILH 832



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 264/557 (47%), Gaps = 45/557 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG LP+ V YNTI+ +  ++G+ ++   L+  M+++GLVP+  T+N  +S  CK G 
Sbjct: 208 MESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGK 267

Query: 61  LKEAMRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + +A R+   M  ++ L    P+  TYN+++ G+C  G+LE+A  L + +     L  + 
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQ 327

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           +YN  +      G+ +EA  ++ ++ + GI P+  ++NI++   CK G +  A  IV  M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           + NG SPD VTY  L+   C  G ++ A  ++  M R     N  T N +LH+L    ++
Sbjct: 388 KRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRI 447

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW------------------ 278
            EA  LL   +++GY LD V+   ++ G     + ++A+++                   
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507

Query: 279 -----DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
                D + E   +P   TY+ ++ GL ++G+  +A  +  E++   + PD   +N  IH
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIH 567

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            FC +G++  A +    M +K     + T N L+ GL  +  + +          KG + 
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISP 627

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +  TYNT I  LC+  ++EDA  LL EM +K + P+ +++  +  A  +    + AQ+  
Sbjct: 628 NICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF 687

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
              V        +                  YS   NE  + G+   A ++ E    +G 
Sbjct: 688 ETAVSICGQKEGL------------------YSLMFNELLAAGQLLKATELLEAVLDRGF 729

Query: 514 AINKSTYMNLMNGLIKR 530
            +    Y +L+  L K+
Sbjct: 730 ELGTFLYKDLVVSLCKK 746



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 218/470 (46%), Gaps = 11/470 (2%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P ++ YN+L+        +E    L K+M    + P+  T+N LI    +S     A +L
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            DE+ E G KPN  T  I+++ YCK G  DK  +++ +ME  G  P+ V YNT++ + C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY----L 253
            G  +++ ++++ M  +GL  + +T N+ +  LC E K+ +A  + +      Y      
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + ++Y  ++ G+ +      A  L++ ++E   + S  +YN  + GL + GK  +A  +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            +++  G+ P   ++N ++ G C  G +  A      M      PD VT   LL G C  
Sbjct: 350 KQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSV 409

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G ++ A    +  +      ++ T N L+ SL    R+ +A  LL +M EK  G D  T 
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKI------NHQVVQPNTSKTPEEIDPSSISYSE 487
             I   L  SG L++A +    M   G        N  +   + S       P  I+YS 
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            +N  C  GR+ +A  +F E   + +  +   Y   ++   K+ K IS A
Sbjct: 530 LLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGK-ISSA 578



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 199/436 (45%), Gaps = 59/436 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   +YN ++D L K G L++ + ++  MK+ G+ P+  TY  L+ GYC +G +  A
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAA 415

Query: 65  MRVVDLMTQNKSLPDVWTYNML-----------------------------------ING 89
             ++  M +N  LP+ +T N+L                                   ++G
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475

Query: 90  WCNAGMLEEAFRLRKEM--------------------ESL---KLLPDVVTYNTLINRFF 126
            C +G L++A  + K M                    +SL     LPD++TY+TL+N   
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++GR  EA  L  E+    ++P+++ +NI I  +CK+GKI  A +++++ME+ G      
Sbjct: 536 KAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+LI        + E   +MD M  KG+  N  T NT +  LC   K+++A  LL+  
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEM 655

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++    +  S+  LI  + +    + A +++ E            Y+ M   L  +G+ 
Sbjct: 656 MQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQL 714

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A ++L  +L  G       +  ++   C + ++E A    +KM++K +  D      +
Sbjct: 715 LKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPV 774

Query: 367 LSGLCREGILEKALKF 382
           + GL + G  ++A  F
Sbjct: 775 IDGLGKMGNKKEANNF 790



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 39/353 (11%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           KP    +N++++   +E +++    + ++M   G SP+  T+N LI A C +  ++ A  
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           + D M  KG K N  T   ++   C     D+   LLNS    G   ++V Y T+++ + 
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI---- 322
           R+ + + + KL ++M+E  ++P   T+N+ I  L + GK   A  + +++     +    
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 323 PDETTFNTIIHGFCSEGQVEKA---------------LQFHN------------------ 349
           P+  T+N ++ GFC  G +E A               LQ +N                  
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 350 --KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M++K   P I + NIL+ GLC+ G+L  A          G + D+VTY  L+   C 
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             +++ A  LL EM      P+ YT   +  +L   GR+ EA++    M E G
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKG 461



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 157/317 (49%), Gaps = 17/317 (5%)

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           T T+  IL      ++++E + L+ S+S +   L   S  ++++ + +    ++A   + 
Sbjct: 42  TPTMACILVRAKMHEEIEELHNLILSSSIQKTKLS--SLLSVVSIFAKSNHIDKAFPQFQ 99

Query: 280 EMKER--QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            ++ R  +  P  + YN ++    +  + E    +  +++  G+ P+  TFN +I   C 
Sbjct: 100 FVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCD 159

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
              V+ A +  ++M EK  KP+  T  IL+ G C+ G+ +K L+   S    G   + V 
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVV 219

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNT++SS C+E R +D+  L+ +M E+ L PD  T+ +  +AL + G++ +A +  S M 
Sbjct: 220 YNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM- 278

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
              +++  +  P          P+SI+Y+  +   C  G  +DA  +FE  R+    ++ 
Sbjct: 279 ---ELDEYLGLPR---------PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSL 326

Query: 518 STYMNLMNGLIKRRKSI 534
            +Y   + GL++  K I
Sbjct: 327 QSYNIWLQGLVRHGKFI 343


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 229/422 (54%), Gaps = 3/422 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V ++ +L  + K    + V  L   M+  G+  +  +YNI+++  C+      A+ 
Sbjct: 66  LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           VV  M +    PDV T + LING+C    + +A  L  +ME +   PDVV YNT+I+   
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G   +A +L D ++  G++ +AVT+N ++   C  G+   A +++R+M      P+ +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+  +ID   K G   EA ++ + M R+ +  +  T N++++ LC   ++DEA  +L+  
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   D V+Y TLI G+ + ++ +   KL+ EM +R ++  T TYN +I G  Q+G+ 
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A ++ + +      P+  T++ +++G C   +VEKAL     M +   + DI T NI+
Sbjct: 366 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E A   FRS   KG   D V+Y T+IS  C++R+ + +  L  +M+E  L
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482

Query: 427 GP 428
            P
Sbjct: 483 LP 484



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 207/384 (53%), Gaps = 3/384 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  +YN +++ L +  +      ++  M K G  P+  T + L++G+C+   
Sbjct: 95  MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +V  M +    PDV  YN +I+G C  G++ +A  L   ME   +  D VTYN+
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     SGR  +A +L+ ++    I PN +T   +I  + KEGK  +A K+   M    
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+LI+  C  G ++EA +M+D+M  KG   + +T NT+++  C  K++DE  
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    ++RG   D ++Y T+I GYF+  + + A +++  M  R   P+  TY+ +++GL
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + + E+A+ +   + +S +  D TT+N +IHG C  G VE A      +  K  KPD+
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           V+   ++SG CR+   +K+   +R
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYR 475



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 215/432 (49%), Gaps = 32/432 (7%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+E + +   M Q++ LP +  ++ +++    +   +    L   ME   +  D+ +YN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN      R + A  ++ ++ + G +P+ VT + +I  +C+  ++  A  +V  MEE G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD V YNT+ID +CK G + +A  + D M R G++ + +T N+++  LCC  +  +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     R    + +++  +I  + ++ K + A+KL++EM  R + P  FTYN++I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF---- 356
              G+ ++A  ML+ ++  G +PD  T+NT+I+GFC   +V++  +   +M ++      
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 357 ----------------------------KPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
                                       +P+I T +ILL GLC    +EKAL  F +   
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
               +D  TYN +I  +CK   +EDA+ L   +  K L PD  +Y  + +      + ++
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469

Query: 449 AQKFTSIMVETG 460
           +      M E G
Sbjct: 470 SDLLYRKMQEDG 481



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 219/437 (50%), Gaps = 20/437 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           LEE   L  +M   + LP +V ++ ++++  +S        L   ++  GI  +  ++NI
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   C+  +   A  +V  M + G+ PD VT ++LI+  C+   + +A  ++  M   G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + + +  NTI+   C    +++A  L +   + G   D V+Y +L+ G     + + A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  +M  R I+P+  T+ A+I    + GK  +A+ +  E+ +  + PD  T+N++I+G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G+V++A Q  + MV K   PD+VT N L++G C+   +++  K FR    +G   D+
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           +TYNT+I    +  R + A  + S M+ +   P+  TY+ +   L  + R+E+A      
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL----- 401

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                     V+  N  K+  E+D ++  Y+  I+  C  G  +DA  +F     KG+  
Sbjct: 402 ----------VLFENMQKSEIELDITT--YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449

Query: 516 NKSTYMNLMNGLIKRRK 532
           +  +Y  +++G  ++R+
Sbjct: 450 DVVSYTTMISGFCRKRQ 466



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 17/327 (5%)

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           N+EE   +   M +     + +  + +L  +   K  D    L +     G   D  SY 
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            +I    R  +   AL +  +M +    P   T +++I G  Q  +   AID+++++ + 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G  PD   +NTII G C  G V  A++  ++M     + D VT N L++GLC  G    A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            +  R  +++    + +T+  +I    KE +  +A  L  EM  + + PD +TY ++   
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L   GR++EA++   +MV  G +                 P  ++Y+  IN  C   R  
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCL-----------------PDVVTYNTLINGFCKSKRVD 331

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNG 526
           +  ++F E  Q+G+  +  TY  ++ G
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQG 358



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 17/191 (8%)

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           S   +E+ +    KM++    P IV  + +LS + +    +  +  F    + G   D  
Sbjct: 46  SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           +YN +I+ LC+  R   A  ++ +M +    PD  T +++     +  R+ +A    S M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
            E G                   P  + Y+  I+  C  G   DA+++F+   + G+  +
Sbjct: 166 EEMG-----------------FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208

Query: 517 KSTYMNLMNGL 527
             TY +L+ GL
Sbjct: 209 AVTYNSLVAGL 219


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 164/559 (29%), Positives = 281/559 (50%), Gaps = 43/559 (7%)

Query: 9   DNVTYNTILDALFKKGKL-------NEV------------RDLLSDMKKQGLVPNRTTYN 49
           D VTYNT+L A  K G L       NE+             D+++  + + L P   TY 
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYT 325

Query: 50  ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
            L++ YCK   ++E+  +   M  N  +PDV T + ++ G+C  G L EA  L +EM  +
Sbjct: 326 TLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEM 385

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
            L P+ V+Y T+IN  F+SGR MEAF L  ++   GI  + VT   ++    K GK  +A
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
            ++   + +   +P+CVTY+ L+D  CK G ME A  ++  M ++ +  N IT ++I++ 
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
              +  L +A  +L    +R    + + Y  LI GYF+  + + A     EMK R++  S
Sbjct: 506 YAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEES 565

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
              ++ ++  L + G+ ++A  ++ ++   G+ PD   + ++I G+  EG    AL    
Sbjct: 566 NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 625

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKE 408
           +M EK+ + D+V  N L+ GL R G  +   ++  S +++ G A D +TYNT+I++ C +
Sbjct: 626 EMKEKNIRFDVVAYNALIKGLLRLGKYDP--RYVCSRMIELGLAPDCITYNTIINTYCIK 683

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG----------------RLEEAQKF 452
            + EDA  +L+EM+   + P+  TY  +   L ++G                R E+A K 
Sbjct: 684 GKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKI 743

Query: 453 TSI---MVETG-KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
             I   +V +G ++  Q V  +       I    ++Y+  I  +C+    + AL+ + + 
Sbjct: 744 LQIHEKLVASGLELKRQKVVLD-EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 802

Query: 509 RQKGIAINKSTYMNLMNGL 527
              GIA N +TY  L+ GL
Sbjct: 803 FVDGIAPNITTYNTLLGGL 821



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 279/558 (50%), Gaps = 38/558 (6%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           DNVTYNT++    +KG +++   LLS+M K+GL  +  T NILV GYC++G ++ A  V+
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             +       DV   N LI+G+C A ++ +A  L +      +  D+VTYNTL+  F ++
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280

Query: 129 GRSMEAFKLIDEL-----DEHGIK--------------PNAVTHNIMIKWYCKEGKIDKA 169
           G    A  L +E+     DE  +K              P  VT+  +I  YCK   ++++
Sbjct: 281 GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEES 340

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
             + + M  NG  PD VT ++++   C+ G + EA  +   M   GL  N ++  TI+++
Sbjct: 341 HSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINS 400

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           L    ++ EA+ L +    RG   D V+  T++ G F+  K   A ++++ + +  + P+
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TY+A++ G  + GK E A  +L ++ +  + P+  TF++II+G+  +G + KA+    
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +MV+++  P+ +   IL+ G  + G  + A  F +    +     +V ++ L+++L +  
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVG 580

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+++A  L+ +M  K + PD   YA++     + G    A      M E   I   VV  
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK-NIRFDVVAY 639

Query: 470 NT-----------------SKTPE-EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
           N                  S+  E  + P  I+Y+  IN +C +G+ +DAL I  E +  
Sbjct: 640 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSY 699

Query: 512 GIAINKSTYMNLMNGLIK 529
           GI  N  TY  L+ GL K
Sbjct: 700 GIMPNAVTYNILIGGLCK 717



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 261/570 (45%), Gaps = 58/570 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VT ++IL    + GKL E   L  +M + GL PN  +Y  +++   K G + EA
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M       D+ T   +++G    G  +EA  + + +  L L P+ VTY+ L++ 
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G+   A  ++ ++++  + PN +T + +I  Y K+G + KA  ++R M +    P+
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + Y  LID   KAG  + A      M  + L+ + +  + +L+ L    ++DEA  L+ 
Sbjct: 531 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 590

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D V+Y +LI GYF++     AL +  EMKE+ I      YNA+I GL + G
Sbjct: 591 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG 650

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +    + + +++ G+ PD  T+NTII+ +C +G+ E AL   N+M      P+ VT N
Sbjct: 651 KYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709

Query: 365 ILLSGLCREGIL----------------EKALKFFR--------------------SWIL 388
           IL+ GLC+ G +                EKA K  +                      + 
Sbjct: 710 ILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVK 769

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG---- 444
           +G + D VTYN LI   C    +E A    S+M    + P+  TY  +   L  +G    
Sbjct: 770 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 829

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
            +EE +K  S M E G +                 P++ +Y   ++ +   G  K  + +
Sbjct: 830 MMEETEKLVSEMNERGLV-----------------PNAATYDILVSGYGRVGNRKKTIIL 872

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             E   KG      TY  L++   K  K I
Sbjct: 873 HIEMITKGFVPTLKTYNVLISDYAKSGKMI 902



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 235/497 (47%), Gaps = 79/497 (15%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY+ +LD   K GK+     +L  M+K+ + PN  T++ +++GY K G L +A+ V
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--------------- 112
           +  M Q   +P+   Y +LI+G+  AG  + A    KEM+S +L                
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578

Query: 113 --------------------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                               PD+V Y +LI+ +F+ G  + A  ++ E+ E  I+ + V 
Sbjct: 579 VGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVA 638

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +IK   + GK D    +   M E G +PDC+TYNT+I+  C  G  E+A  +++ M 
Sbjct: 639 YNALIKGLLRLGKYDPR-YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMK 697

Query: 213 RKGLKMNTITLNTILHTLC---------CEKKLDEAY----------------------- 240
             G+  N +T N ++  LC           K L +AY                       
Sbjct: 698 SYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLEL 757

Query: 241 ----MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
               ++L+   KRG   D V+Y  LI GY       +ALK + +M    I P+  TYN +
Sbjct: 758 KRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTL 817

Query: 297 IWGLSQSG----KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           + GLS +G      E+   +++E+ + G++P+  T++ ++ G+   G  +K +  H +M+
Sbjct: 818 LGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMI 877

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS---SLCKER 409
            K F P + T N+L+S   + G + +A +     + KG+  +S TY+ L     +L  E 
Sbjct: 878 TKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEP 937

Query: 410 RLEDAFGLLSEMEEKKL 426
            ++ +     E+E KKL
Sbjct: 938 EIDRSLKRSYEIEVKKL 954



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 263/588 (44%), Gaps = 77/588 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P    +NT+L      G +++V+ + SDM   G+VP+  + N+LV   CK+G 
Sbjct: 85  MRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGD 144

Query: 61  LKEAMRVVDLMTQNKSLPDV--WTYNMLINGWCNAGMLEEAFRLRKEMESLKLL------ 112
           L  A+  +    +N  + D+   TYN +I G+C  G++++ F L  EM    L       
Sbjct: 145 LDLALGYL----RNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITC 200

Query: 113 -----------------------------PDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
                                         DV+  NTLI+ + E+    +A +LI+    
Sbjct: 201 NILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWR 260

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKA-------------------CKIVRNMEENGFSPD 184
             +K + VT+N ++K +CK G + +A                     +V   E     P 
Sbjct: 261 SDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPT 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TLI A CK   +EE+  +   M   G+  + +T ++IL+  C   KL EA +L  
Sbjct: 321 LVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFR 380

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + VSY T+I   F+  +   A  L  +M  R I     T   ++ GL + G
Sbjct: 381 EMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVG 440

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT++A ++   +L+  + P+  T++ ++ G+C  G++E A     KM ++   P+++T +
Sbjct: 441 KTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFS 500

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++G  ++G+L KA+   R  + +    +++ Y  LI    K    + A     EM+ +
Sbjct: 501 SIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSR 560

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           +L      +  +   L   GR++EA+     M   G                 IDP  ++
Sbjct: 561 RLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG-----------------IDPDIVN 603

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  I+ +  +G    AL I +E ++K I  +   Y  L+ GL++  K
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 249/537 (46%), Gaps = 76/537 (14%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P++V+Y TI+++LFK G++ E  +L S M  +G+  +  T   ++ G  K+G 
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA  V + + +    P+  TY+ L++G+C  G +E A  + ++ME   + P+V+T+++
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY------------CKE----- 163
           +IN + + G   +A  ++ E+ +  + PN + + I+I  Y            CKE     
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561

Query: 164 ------------------GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                             G++D+A  ++ +M   G  PD V Y +LID   K GN   A 
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAAL 621

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M  K ++ + +  N ++  L    K D  Y + +   + G   D ++Y T+I  Y
Sbjct: 622 SIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTY 680

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID-------------- 311
               K   AL + +EMK   IMP+  TYN +I GL ++G     I               
Sbjct: 681 CIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKA 740

Query: 312 ----------------------MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
                                 +L+E+++ G+  D  T+N +I G+C+   VEKAL+ ++
Sbjct: 741 DKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYS 800

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGI----LEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +M      P+I T N LL GL   G+    +E+  K       +G   ++ TY+ L+S  
Sbjct: 801 QMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 860

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            +    +    L  EM  K   P   TY  + +   +SG++ EA++  + ++  G+I
Sbjct: 861 GRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRI 917



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 255/536 (47%), Gaps = 43/536 (8%)

Query: 33  LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
            S M+  GLVP    +N L+  +   G + +   +   M     +PDV++ N+L++  C 
Sbjct: 82  FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G L+ A    +  + + +  D VTYNT+I  F + G   + F L+ E+ + G+  +++T
Sbjct: 142 VGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            NI++K YC+ G +  A  ++ N+ + G + D +  NTLID  C+A  M +A  +++   
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSW 259

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE----------------- 255
           R  +K++ +T NT+L   C    L  A  L N     G++ DE                 
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEI--LGFWKDEDRLKNNDVVTQNEIKNL 317

Query: 256 ----VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               V+Y TLI  Y +      +  L+ +M    IMP   T +++++G  + GK  +A  
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E+ + G+ P+  ++ TII+     G+V +A    ++MV +    DIVTC  ++ GL 
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G  ++A + F + +    A + VTY+ L+   CK  ++E A  +L +ME++ + P+  
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVE----TGKINHQVVQPNTSKTPEE---------- 477
           T+++I     + G L +A      MV+       I + ++     K  E+          
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557

Query: 478 ----IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               ++ S++ +   +N     GR  +A  +  +   KGI  +   Y +L++G  K
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFK 613



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 208/463 (44%), Gaps = 48/463 (10%)

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           + TLI  +    R   A      +   G+ P     N ++  +   G + +   +  +M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEA---FRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             G  PD  + N L+ + CK G+++ A    R  DV     + ++ +T NT++   C + 
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV-----VDIDNVTYNTVIWGFCQKG 176

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            +D+ + LL+   KRG   D ++   L+ GY R      A  +   + +  +       N
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE- 353
            +I G  ++    QA +++    +S +  D  T+NT++  FC  G + +A    N+++  
Sbjct: 237 TLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 354 ------------------KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                             K+ +P +VT   L++  C+   +E++   ++  I+ G   D 
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VT ++++   C+  +L +A  L  EM E  L P+  +YA I  +L +SGR+ EA    S 
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416

Query: 456 MVETGKINHQVVQPNT----------SKTPEEI---------DPSSISYSEKINEHCSQG 496
           MV  G I+  +V   T          +K  EE+          P+ ++YS  ++ +C  G
Sbjct: 417 MVVRG-ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLG 475

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           + + A  + ++  ++ +  N  T+ +++NG  K +  +SKAVD
Sbjct: 476 KMELAELVLQKMEKEHVPPNVITFSSIINGYAK-KGMLSKAVD 517



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 125/303 (41%), Gaps = 87/303 (28%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW--- 60
            G  PD +TYNTI++    KGK  +  D+L++MK  G++PN  TYNIL+ G CK G+   
Sbjct: 664 LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPT 723

Query: 61  ---------------------------------LKEAMRVVDLMTQNKSLPDVWTYNMLI 87
                                            LK    V+D M +     D+ TYN LI
Sbjct: 724 PITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALI 783

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG----RSMEAFKLIDELDE 143
            G+C    +E+A +   +M    + P++ TYNTL+     +G       E  KL+ E++E
Sbjct: 784 RGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 843

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ PNA T++I++  Y + G   K   +   M   GF P   TYN LI    K+G M E
Sbjct: 844 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIE 903

Query: 204 AFRMM---------------DV--------------------------------MGRKGL 216
           A  ++               D+                                MGRKGL
Sbjct: 904 ARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGL 963

Query: 217 KMN 219
           K +
Sbjct: 964 KFS 966


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 226/437 (51%), Gaps = 9/437 (2%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           MK++G  P   T N +++   +L  ++ A      M + +   +V+T+N++IN  C  G 
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      ME   + P +VTYNTL+  F   GR   A  +I E+   G +P+  T+N 
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++ W C EG+   A +++R M+E G  PD V+YN LI      G++E AF   D M ++G
Sbjct: 301 ILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +     T NT++H L  E K++ A +L+    ++G  LD V+Y  LI GY +   A +A 
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L DEM    I P+ FTY ++I+ L +  KT +A ++  +++  GM PD    NT++ G 
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C+ G +++A     +M   S  PD VT N L+ GLC EG  E+A +       +G   D 
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           ++YNTLIS   K+   + AF +  EM      P   TY A+   L ++   E A++    
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597

Query: 456 MVETGKINHQVVQPNTS 472
           M   G      + PN S
Sbjct: 598 MKSEG------IVPNDS 608



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 187/369 (50%), Gaps = 38/369 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG  P  VTYNT++     +G++   R ++S+MK +G  P+  TYN ++S  C  G 
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E +R    M +   +PD  +YN+LI G  N G LE AF  R EM    ++P   TYNT
Sbjct: 311 ASEVLRE---MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA----------- 169
           LI+  F   +   A  LI E+ E GI  ++VT+NI+I  YC+ G   KA           
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427

Query: 170 ---------------CKIVRNMEEN---------GFSPDCVTYNTLIDANCKAGNMEEAF 205
                          C+  +  E +         G  PD V  NTL+D +C  GNM+ AF
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M    +  + +T N ++  LC E K +EA  L+    +RG   D +SY TLI+GY
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +      A  + DEM      P+  TYNA++ GLS++ + E A ++L E+   G++P++
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607

Query: 326 TTFNTIIHG 334
           ++F ++I  
Sbjct: 608 SSFCSVIEA 616



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 205/436 (47%), Gaps = 38/436 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T N IL  L +  ++       +DM +  +  N  T+NI+++  CK G LK+A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244

Query: 65  MRVVDLM---------------TQNKSL--------------------PDVWTYNMLING 89
              + +M                Q  SL                    PD+ TYN +++ 
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            CN G   E  R   EM+ + L+PD V+YN LI     +G    AF   DE+ + G+ P 
Sbjct: 305 MCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+N +I     E KI+ A  ++R + E G   D VTYN LI+  C+ G+ ++AF + D
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G++    T  ++++ LC + K  EA  L      +G   D V   TL+ G+    
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             +RA  L  EM    I P   TYN ++ GL   GK E+A +++ E+ + G+ PD  ++N
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I G+  +G  + A    ++M+   F P ++T N LL GL +    E A +  R    +
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601

Query: 390 GKAVDSVTYNTLISSL 405
           G   +  ++ ++I ++
Sbjct: 602 GIVPNDSSFCSVIEAM 617



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 190/401 (47%), Gaps = 23/401 (5%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           + +  +++++  C+   +D+A +    M+E GF P   T N ++    +   +E A+   
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M R  +K N  T N +++ LC E KL +A   L      G     V+Y TL+ G+   
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +   A  +  EMK +   P   TYN ++  +   G+   A ++L E+ + G++PD  ++
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSY 330

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I G  + G +E A  + ++MV++   P   T N L+ GL  E  +E A    R    
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG  +DSVTYN LI+  C+    + AF L  EM    + P ++TY ++   L    +  E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450

Query: 449 AQKFTSIMVETGKINHQVVQPNT---------------SKTPE----EIDPSSISYSEKI 489
           A +    +V  G +   +V  NT               S   E     I+P  ++Y+  +
Sbjct: 451 ADELFEKVVGKG-MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              C +G++++A ++  E +++GI  +  +Y  L++G  K+
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 148/325 (45%), Gaps = 21/325 (6%)

Query: 210 VMGRKGLKMNTITLNTILHTLCCE-KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           V+    L+  +  L  +L   CC+ + +DEA        ++G+Y    +   ++T   R 
Sbjct: 144 VLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRL 203

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +   A   + +M   +I  + +T+N MI  L + GK ++A   L  +   G+ P   T+
Sbjct: 204 NRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           NT++ GF   G++E A    ++M  K F+PD+ T N +LS +C EG   +A +  R    
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKE 320

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   DSV+YN LI        LE AF    EM ++ + P  YTY  +   L    ++E 
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A+     + E G                 I   S++Y+  IN +C  G  K A  + +E 
Sbjct: 381 AEILIREIREKG-----------------IVLDSVTYNILINGYCQHGDAKKAFALHDEM 423

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKS 533
              GI   + TY +L+  L ++ K+
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKT 448


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 239/455 (52%), Gaps = 7/455 (1%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           ++ TY  ++  L K   L+E   LL DMK +G+ P    +N+++ G C+ G L+ A+ V 
Sbjct: 79  NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY 138

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M  +   PD  TY  L++G   AG L +A ++ +EM S + +PD  T   ++      
Sbjct: 139 RQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLG 197

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN-MEENGFSPDCVT 187
            R  +A +L++E+   G+  NA+T++ ++   CK  ++D+A  ++   +   GF+PD VT
Sbjct: 198 DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVT 257

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+T+ID  CKAG + +A   +D+          IT N+++   C    +DEA  LL    
Sbjct: 258 YSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 314

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 D ++Y TL++ + +  + + A +L+ +M   ++ P   T+ +++ GL   G+ E
Sbjct: 315 DDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 374

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++L E+ + G  P   T+N ++ G+C   QV KA +       + F P+ VT NIL+
Sbjct: 375 DALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILV 434

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDS--VTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +G CR G  ++AL++      +G    +    Y  ++ +LC++ R +DA     EM ++ 
Sbjct: 435 AGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 494

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             P   T+A +  AL ++ + ++A +    M++ G
Sbjct: 495 YVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 529



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 260/528 (49%), Gaps = 26/528 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSD-MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           D+ T+  +L  L    KL  +  LL D ++ +GL P+    N +++  C       AM +
Sbjct: 9   DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M +  ++     YN LI+  C A +L+EA  L  +M+S  + P  + +N +I     
Sbjct: 69  FDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCR 127

Query: 128 SGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +GR   A  +  ++ D H   P+ +T+  ++    K G++  A ++++ M      PD  
Sbjct: 128 AGRLRHALGVYRQMNDAH--PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY-MLLNS 245
           T   ++ + C    +++A  +++ M  +G+  N IT + ++  LC  ++LDEA  +LL  
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++RG+  D V+Y T+I G  +  +   A+ +++EM      P+  TYN++I G  ++G 
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGD 302

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++AI +L +++     PD  T+ T++  FC  G+++ A +   +MV     PD+VT   
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GLC EG +E AL+       +G      TYN ++   CK  ++  A  L+++   + 
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS- 484
             P+  TY  +      +GR ++A ++               Q N+   P    P+S++ 
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLD-------------QLNSEGGPC---PTSVAM 466

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  ++  C  GR  DA+Q +EE  Q+G     +T+  ++  L K  +
Sbjct: 467 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 514



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 221/417 (52%), Gaps = 6/417 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TY  ++  L K G+L +   +L +M     VP+ TT  ++V   C    + +A  +
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 206

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR-KEMESLKLLPDVVTYNTLINRFF 126
           V+ M       +  TY+ L++G C    L+EA  L   E+      PD+VTY+T+I+   
Sbjct: 207 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++GR  +A   +D  +E    P A+T+N +I  YC+ G +D+A +++  M ++  +PD +
Sbjct: 267 KAGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY TL+ A CK G +++A+ +   M    L  + +T  +++  LC E ++++A  LL   
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           ++RG      +Y  ++ GY +  +  +A +L  + + R  +P+T TYN ++ G  ++G+T
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 307 EQAIDMLNEL-LQSGMIPDETT-FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +QA+  L++L  + G  P     +  I+   C +G+ + A+QF+ +M+++ + P   T  
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            ++  LC+    ++A +     I  G      T + ++S+ C+   ++ A  L SE+
Sbjct: 504 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 171/314 (54%), Gaps = 5/314 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY+T++D L K G+L +  D+  +M      P   TYN L+ GYC+ G + EA
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEA 306

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R++  M  +   PDV TY  L++ +C  G L++A+ L ++M + KL PDVVT+ +L++ 
Sbjct: 307 IRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 366

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  +A +L++E+   G  P   T+N ++  YCK  ++ KA ++V +    GF P+
Sbjct: 367 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPN 426

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLNTILHTLCCEKKLDEAYML 242
            VTYN L+   C+AG  ++A + +D +  +G     +      IL  LC + + D+A   
Sbjct: 427 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 486

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                +RGY     ++ T++    +  +  +A +L +EM +    P   T +A++    +
Sbjct: 487 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 546

Query: 303 SGKTEQAIDMLNEL 316
           +G  ++A ++ +EL
Sbjct: 547 AGMIQKADELASEL 560


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 242/455 (53%), Gaps = 5/455 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  +T+NT+LD+ FK G L  V  +  +MK++ +  +  TYNIL++G+ K G ++EA
Sbjct: 269 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEA 328

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R    M ++      +++N LI G+C  G+ +EA+ +  EM +  + P   TYN  I  
Sbjct: 329 RRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRA 388

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             E GR  +A +L+  +      P+ V++N ++  Y K  K  +A  +  +++    +P 
Sbjct: 389 LCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPS 444

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLID  C++GN+E A R+ + M  + +  + IT  T+L        L  A  + +
Sbjct: 445 IVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYD 504

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQS 303
              ++G   D  +Y T   G  R   + +A +L +EM  E    P    YN  I GL + 
Sbjct: 505 EMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKV 564

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+AI+   ++ + G++PD  T+ T+I G+  +G+ + A   +++M+ K   P ++T 
Sbjct: 565 GNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITY 624

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +L+ G  + G LE+A ++      +G   + +T+N L+  +CK   +++A+  L +MEE
Sbjct: 625 FVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEE 684

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           + + P++Y+Y  + +   +  + EE  K    M++
Sbjct: 685 EGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLD 719



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 248/525 (47%), Gaps = 35/525 (6%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M ++G +P+    NI++        + +A  V + M  +  +P V T+N +++    AG 
Sbjct: 230 MIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGD 289

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           LE   ++  EM+   +    VTYN LIN F +SG+  EA +   ++   G      + N 
Sbjct: 290 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNP 349

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I+ YCK+G  D+A  +   M   G  P   TYN  I A C+ G +++A  ++  M    
Sbjct: 350 LIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAP- 408

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              + ++ NT++H     +K  EA +L +           V+Y TLI G         A 
Sbjct: 409 ---DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQ 465

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L +EM  + I P   TY  ++ G  ++G    A ++ +E+L+ G+ PD   + T   G 
Sbjct: 466 RLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGE 525

Query: 336 CSEGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
              G  EKA + H +MV E    PD+   N+ + GLC+ G LEKA++F R     G   D
Sbjct: 526 LRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPD 585

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTY T+I    ++ R + A  L  EM  K+L P   TY  +     ++GRLE+A ++++
Sbjct: 586 HVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYST 645

Query: 455 IMVETGKINHQVVQPNT-----------------------SKTPEE-IDPSSISYSEKIN 490
            M + G      V+PN                         K  EE I P+  SY+  I+
Sbjct: 646 EMKKRG------VRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILIS 699

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +HC   ++++ +++++E   K I  +  T+  L   L K  +S++
Sbjct: 700 KHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESMA 744



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 171/375 (45%), Gaps = 79/375 (21%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TYN  + AL + G++++ R+LLS M      P+  +YN L+ GY K+    EA
Sbjct: 374 GIYPTTSTYNIYIRALCEFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMRKFVEA 429

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D +      P + TYN LI+G C +G LE A RL++EM S  + PDV+TY TL+  
Sbjct: 430 SLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKG 489

Query: 125 FFESGR-----------------------------------SMEAFKLIDEL---DEHGI 146
           F ++G                                    S +AF+L +E+   D H  
Sbjct: 490 FVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHA- 548

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT---------------- 190
            P+   +N+ I   CK G ++KA +  R +   G  PD VTY T                
Sbjct: 549 -PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARD 607

Query: 191 -------------------LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                              LI  + KAG +E+AF+    M ++G++ N +T N +LH +C
Sbjct: 608 LYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMC 667

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
               +DEAY  L    + G   ++ SY  LI+ +   +K    +KL+ EM +++I P  +
Sbjct: 668 KAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGY 727

Query: 292 TYNAMIWGLSQSGKT 306
           T+ A+   L +  ++
Sbjct: 728 THRALFKHLEKDHES 742



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 40/278 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +TY T+L    K G L+   ++  +M ++G+ P+   Y     G  +LG  ++A R+
Sbjct: 478 PDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRL 537

Query: 68  VD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            + ++ ++   PD+  YN+ I+G C  G LE+A   ++++  + L+PD VTY T+I  + 
Sbjct: 538 HEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 597

Query: 127 E-----------------------------------SGRSMEAFKLIDELDEHGIKPNAV 151
           E                                   +GR  +AF+   E+ + G++PN +
Sbjct: 598 EKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVM 657

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           THN ++   CK G ID+A + +  MEE G SP+  +Y  LI  +C     EE  ++   M
Sbjct: 658 THNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEM 717

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
             K ++ +  T   +   L  EK  D   M L+S+ K+
Sbjct: 718 LDKEIEPDGYTHRALFKHL--EK--DHESMALDSSGKQ 751



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 49/87 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +T+N +L  + K G ++E    L  M+++G+ PN+ +Y IL+S +C L  
Sbjct: 647 MKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDK 706

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI 87
            +E +++   M   +  PD +T+  L 
Sbjct: 707 WEEVVKLYKEMLDKEIEPDGYTHRALF 733


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 223/405 (55%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L +L K+G++  V  +  +M ++ +  N  T++++++G CK+G  ++A  VV+ M  
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               P V TYN +I+G+C AG + +A  L KEM + ++ P+ +T+N LI+ F        
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A K+ +E+   G++PN VT+N +I   C  GK+D+A  +   M   G  P+ VTYN LI+
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK   ++EA  M+D +G++GL  N IT NT++       ++D+A++L +     G   
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           +  +Y  LI G+ R+     A KL  EM+   +     TYN ++  L + G+T +A+ +L
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           +E+ + G+ P   T+N +I G+  EG    AL     M +K  + +IVT N+L+ G C +
Sbjct: 498 DEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNK 557

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           G LE+A +     + KG   +  TY+ L   + ++  + D  G L
Sbjct: 558 GKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 602



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 234/445 (52%), Gaps = 1/445 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +GC  +++  + ++ A  K G+++   +        G   +  + N ++    K G +  
Sbjct: 154 WGC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              V   M + +   +V T++++ING C  G  ++A  + ++M++    P V+TYNT+I+
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + ++G+  +A  L+ E+    I PN +T NI+I  +C++  +  A K+   M+  G  P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN+LI+  C  G ++EA  + D M   GLK N +T N +++  C +K L EA  +L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   KRG   + +++ TLI  Y +  + + A  L   M +  + P+  TYN +I G  + 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A  +  E+  +G+  D  T+N ++   C +G+  KA++  ++M E    P  +T 
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ G  REG    AL        KG+  + VTYN LI   C + +LE+A  LL+EM E
Sbjct: 513 NALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 572

Query: 424 KKLGPDRYTYAAIHTALVESGRLEE 448
           K L P+R TY  +   ++E G + +
Sbjct: 573 KGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/394 (33%), Positives = 221/394 (56%), Gaps = 14/394 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VT++ +++ L K GK  +  D++ DMK  G  P+  TYN ++ GYCK G + +A  ++  
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M   +  P+  T+N+LI+G+C    +  A ++ +EM+   L P+VVTYN+LIN    +G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA  L D++   G+KPN VT+N +I  +CK+  + +A +++ ++ + G +P+ +T+NT
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LIDA  KAG M++AF +  +M   G+  N  T N ++   C E  + EA  L       G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y  L+    +  +  +A++L DEM E  + PS  TYNA+I G  + G +  A+
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++   + + G   +  T+N +I GFC++G++E+A +  N+M+EK   P+  T +IL    
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL---- 585

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            R+ ++EK              +D   YN  ISS
Sbjct: 586 -RDEMMEKGFI---------PDIDGHLYNVSISS 609



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/360 (35%), Positives = 202/360 (56%), Gaps = 16/360 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ +G  P  +TYNTI+D   K GK+ +   LL +M  + + PN  T+NIL+ G+C+   
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A +V + M +    P+V TYN LING C+ G L+EA  L+ +M  + L P+VVTYN 
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +     EA +++D++ + G+ PN +T N +I  Y K G++D A  +   M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN LI   C+ GN++EA ++   M   GLK + +T N ++  LC + +  +A 
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   + G     ++Y  LI GYFR+  +  AL +   M+++    +  TYN +I G 
Sbjct: 495 RLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              GK E+A  +LNE+L+ G+IP+ TT++ +                 ++M+EK F PDI
Sbjct: 555 CNKGKLEEANRLLNEMLEKGLIPNRTTYDIL----------------RDEMMEKGFIPDI 598



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 246/524 (46%), Gaps = 49/524 (9%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNIL-VSGYCKLGWLK 62
           FG + +   +  +L  L      N++R LL    K     N T ++ L V G     W  
Sbjct: 101 FGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLG----SWGC 156

Query: 63  EAMRVVDLMTQNKSLPDVWTY------NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
               +VD++        VW Y      ++ + G+  AG  +  FRL             +
Sbjct: 157 ANSIIVDML--------VWAYVKNGEMDLALEGFDRAG--DYGFRL-----------SAL 195

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           + N ++    + GR      +  E+    I  N VT +++I   CK GK  KA  +V +M
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +  GFSP  +TYNT+ID  CKAG M +A  ++  M  K +  N IT N ++   C ++ +
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
             A  +     ++G   + V+Y +LI G   + K + AL L D+M    + P+  TYNA+
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I G  +    ++A +ML+++ + G+ P+  TFNT+I  +   G+++ A    + M++   
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P++ T N L+ G CREG +++A K  +     G   D VTYN L+ +LCK+     A  
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL EM E  L P   TY A+       G    A    ++M + G+               
Sbjct: 496 LLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR--------------- 540

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
               + ++Y+  I   C++G+ ++A ++  E  +KG+  N++TY
Sbjct: 541 --RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 208/418 (49%), Gaps = 19/418 (4%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           +  + L+  + ++G    A +  D   ++G + +A++ N M+    KEG+I     + + 
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M       + VT++ +I+  CK G  ++A  +++ M   G   + IT NTI+   C   K
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + +A  LL     +  + +E+++  LI G+ RDE    A K+++EM+ + + P+  TYN+
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL  +GK ++A+ + +++   G+ P+  T+N +I+GFC +  +++A +  + + ++ 
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDA 414
             P+++T N L+    + G ++ A    RS +L      +V TYN LI   C+E  +++A
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L  EME   L  D  TY  +  AL + G   +A +    M E G              
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG-------------- 504

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              ++PS ++Y+  I+ +  +G    AL +     +KG   N  TY  L+ G   + K
Sbjct: 505 ---LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 136/309 (44%), Gaps = 41/309 (13%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +LH L   K  ++   LL+S +K  +Y +   + +L             L  W       
Sbjct: 113 LLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL-----------SVLGSWG------ 155

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
              ++   + ++W   ++G+ + A++  +     G      + N ++     EG++    
Sbjct: 156 -CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVE 214

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA---LKFFRSWILKGKAVDSVTYNTLI 402
             + +M+ +    ++VT +++++GLC+ G  +KA   ++  ++W   G +   +TYNT+I
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW---GFSPSVITYNTII 271

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              CK  ++  A  LL EM  K++ P+  T+  +         +  A+K    M   G  
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG-- 329

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
               +QPN            ++Y+  IN  CS G+  +AL + ++    G+  N  TY  
Sbjct: 330 ----LQPNV-----------VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 523 LMNGLIKRR 531
           L+NG  K++
Sbjct: 375 LINGFCKKK 383


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 264/550 (48%), Gaps = 24/550 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+P+  TY  ++      G L+    LL +MK  G   N   +  L+ G C  G + EA+
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                M ++ + PDV TY  L++  C AG  +EA  + +EM +    PD VT++TLI+  
Sbjct: 65  EHFRAMAKDCA-PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC-KEGKIDKACKIVRNMEENGFSPD 184
            + G   +AF++++++ + G+  +      +I+  C K   ++ A K++  +   GF+P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + +N +I+  CKA +++ A+++++VM  KG   N  T   ++  LC   ++ EA  LL 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + V+Y T+I G  +  + + A +L+  M+ R   P+  T+N +I GL ++ 
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK-PDIVTC 363
           + E+A  + + + ++G  PD  T+N++I G C   QV++A Q    + E      + VT 
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 363

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + L  G    G +  A + F   + KG + D  TY +LI   CK  R  +   L+ EM  
Sbjct: 364 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEA-QKFTSI------------------MVETGKINH 464
           K   P   T +A+   L E    E A Q F S+                  M    K N 
Sbjct: 424 KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNK 483

Query: 465 --QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
              V++    K   + +PSS +    +   C  GR  DA Q+  +  ++G A   S+Y  
Sbjct: 484 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNG 543

Query: 523 LMNGLIKRRK 532
           L++GL + ++
Sbjct: 544 LLSGLSRLQR 553



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 253/531 (47%), Gaps = 75/531 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL----------------------- 41
           GC PD VT++T++D L K G   +   +L D+ ++G+                       
Sbjct: 108 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 167

Query: 42  -------------VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
                         P    +N++++G+CK   L  A +++++M +   +P+V+T+ +LI 
Sbjct: 168 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G C A  + EA +L ++M +    P+VVTY+T+IN   + G+  +A++L   ++     P
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 287

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N VTHNI+I   CK  +I++A ++   M E G +PD +TYN+LID  CK+  ++EAF++ 
Sbjct: 288 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLF 347

Query: 209 DVMGRKGLK-MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
             +   G+   N +T +T+ H      ++ +A  + +    +G+  D  +Y +LI  Y +
Sbjct: 348 QTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCK 407

Query: 268 DEKA-----------------------------------NRALKLWDEMKERQIMPSTFT 292
             +A                                    RA++L+D M  R        
Sbjct: 408 TSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALI 467

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQS---GMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           YN ++ G++++ K  +A+ +L +++        P  +  + ++   C  G+ + A Q  +
Sbjct: 468 YNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLH 527

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           KM E+ F   + + N LLSGL R    ++A + F + +  G A +  T N +IS LC   
Sbjct: 528 KMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAA 587

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +++DA+ L+  M +    PD  T   +     +SGR + A+K    M E G
Sbjct: 588 KVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG 638



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 211/436 (48%), Gaps = 39/436 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P+  T+  ++  L K  ++ E + LL  M   G  PN  TY+ +++G CK G + +A
Sbjct: 214 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDA 273

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +  LM +    P+V T+N+LI+G C A  +EEA +L   M      PD++TYN+LI+ 
Sbjct: 274 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 333

Query: 125 FFESGRSMEAFKLIDELDEHGIKP-NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             +S +  EAF+L   + E G+   NAVT++ +   Y   G++  AC+I   + + GFSP
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TY +LI   CK     E   +++ M  KG      TL+ +L  L      + A  L 
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM---KERQIMPSTFTYNAMIWGL 300
           +S + RG   D + Y  ++ G  R  K N+AL + +++   ++R+  PS+   +A++  L
Sbjct: 454 DSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESL 513

Query: 301 SQSGKTEQAIDMLNEL-----------------------------------LQSGMIPDE 325
            Q G+T+ A  +L+++                                   + +G  P+ 
Sbjct: 514 CQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEI 573

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           +T N +I   CS  +V+ A +   +M +    PDI TCN L+ G C+ G  + A K    
Sbjct: 574 STVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEE 633

Query: 386 WILKGKAVDSVTYNTL 401
               G   +  T++ L
Sbjct: 634 MTEAGLEPNDTTHDLL 649



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 55/303 (18%)

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R  MP+ FTY  +I G S +G  + AI +L E+  +G   +     T++ G C  G+V +
Sbjct: 3   RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL+ H + + K   PD++T   L+  LC+ G  ++A    R  I +G A D+VT++TLI 
Sbjct: 63  ALE-HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLID 121

Query: 404 SLCKERRLEDAFGLLSEMEEKKLG------------------------------------ 427
            LCK    E AF +L ++ ++ +G                                    
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFT 181

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH---------QVVQPNTSKTPEEI 478
           P    +  +     ++  L+ A K   +M+E G + +          + + N     +++
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 479 ---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     P+ ++YS  IN  C QG+  DA ++F+   ++    N  T+  L++GL K
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 530 RRK 532
            ++
Sbjct: 302 AKR 304


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 240/456 (52%), Gaps = 3/456 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G +PD V++N+ +D+L K G+  E  ++   M  +G  PN  TY IL+ GY   G 
Sbjct: 212 MTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGC 271

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             + M   + M  +  + +   + +LI+ +   GM++EA  +  EM+   L PDV TY+T
Sbjct: 272 FADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYST 331

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     GR  +A    +++   G++PN V ++ +I+ +C  G + KA ++V  M  NG
Sbjct: 332 LISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNG 391

Query: 181 FS-PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+   +N+++ + CK G + +A  + D++   G + + I  NT++   C   ++ +A
Sbjct: 392 IPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKA 451

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + +L++    G   D  +Y TL+ GYF+  + +  L L+ EM +++I P+T TYN ++ G
Sbjct: 452 FSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDG 511

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+T  A  ML+E++  G      T+N I+ G C     ++A+    K+   + K +
Sbjct: 512 LFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFN 571

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I T N +++ +      E+A   F +    G   ++ TY  +I +L KE  +E+A  + S
Sbjct: 572 ITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFS 631

Query: 420 EMEEKKLGP-DRYTYAAIHTALVESGRLEEAQKFTS 454
            ME+    P  R     I T L+E G + +A  + S
Sbjct: 632 SMEKSGCAPCSRLLNDTIRT-LLEKGEIVKAGNYMS 666



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 246/526 (46%), Gaps = 71/526 (13%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD VTYNT++   FK+GK+ +  +L  +M +QG VP+  T+N +++  CK   +  A 
Sbjct: 112 CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAE 171

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  M  N   P+  TY  +I+G+   G  EEA ++ +EM    L+PD+V++N+ ++  
Sbjct: 172 LLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSL 231

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHN------------------------------- 154
            + GRS EA ++   +   G +PN VT+                                
Sbjct: 232 CKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANC 291

Query: 155 ----IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
               I+I  Y K G +D+A  I+  M+  G SPD  TY+TLI A C+ G + +A    + 
Sbjct: 292 LVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQ 351

Query: 211 MGRKGLKMNTIT------------------------------------LNTILHTLCCEK 234
           M   G++ NT+                                      N+I+H++C E 
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           ++ +A+ + +     G   D + + TLI GY    +  +A  + D M    I P TFTYN
Sbjct: 412 RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ G  +SG+ +  +++  E+    + P   T+N I+ G    G+   A +  ++M+  
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
                + T NI+L GLCR    ++A+  F+         +  T NT+I+S+   +R E+A
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             L S + +  L P+  TY  +   L++ G +EEA    S M ++G
Sbjct: 592 KDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/561 (24%), Positives = 246/561 (43%), Gaps = 91/561 (16%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR- 101
           P   TY ++++G C+    +  +     + +     D    N ++   C     ++A + 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL-DEHGI-KPNAVTHNIMIKW 159
           L + M  L  +PD  +Y  ++ R  +  RS +A  L+  +  E G+  P+ VT+N +I  
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA--------------------- 198
           + KEGKI KAC +   M + GF PD VT+N++I+A CKA                     
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 199 --------------GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
                         G  EEA +M   M  +GL  + ++ N+ + +LC   +  EA  +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 245 SASKRGYYLDEVSYGTLITGY------------------------------FRDEKANR- 273
           S + +G+  + V+YG L+ GY                                D  A R 
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 274 ----ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               A+ +  EM+ + + P  FTY+ +I  L + G+   A+D  N+++ +G+ P+   ++
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSF-KPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           ++I GFC+ G + KA +   +M+     +P+I   N ++  +C+EG +  A   F     
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G+  D + +NTLI   C    +  AF +L  M    +GPD +TY  +     +SGR+++
Sbjct: 426 IGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDD 485

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
                  M +                 ++I P++++Y+  ++     GR   A ++  E 
Sbjct: 486 GLNLFREMSD-----------------KKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEM 528

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
              G  ++  TY  ++ GL +
Sbjct: 529 IGCGTTVSLPTYNIILKGLCR 549



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 175/356 (49%), Gaps = 1/356 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G  PD  TY+T++ AL + G+L +  D  + M   G+ PN   Y+ L+ G+C  G 
Sbjct: 317 MQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGD 376

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  +V ++M      P++  +N +++  C  G + +A  +   ++ +    D++ +N
Sbjct: 377 LVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFN 436

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+ +   G   +AF ++D +   GI P+  T+N ++  Y K G+ID    + R M + 
Sbjct: 437 TLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P  VTYN ++D   +AG    A +M+  M   G  ++  T N IL  LC     DEA
Sbjct: 497 KIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            ++           +  +  T+I   +  ++   A  L+  + +  ++P+  TY  MI  
Sbjct: 557 IVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRN 616

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           L + G  E+A +M + + +SG  P     N  I     +G++ KA  + +K+  KS
Sbjct: 617 LLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKS 672


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 225/423 (53%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP    ++ +L A+ K  K + V  L   M+  G+  N  T NIL++ +C+   L  A+ 
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M +    PD+ T+  L+NG+C    + +A  +   M  +   P+VV YNT+I+   
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +S +   A  L++ ++  GI+P+AVT+N +I   C  G+ D A ++V  M +    PD  
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+N LIDA  K G + EA  + + M R+ L  + +T + +++ LC   +LDEA  +    
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + D V+Y  LI GY + +K    +KL+ EM +R ++ +T TY  +I G  ++GK 
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A ++   ++  G+ P+  T+N ++HG C  G++EKAL     M +     DIVT NI+
Sbjct: 378 NVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNII 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +  A   + S  LKG   D  TY  ++  L K+    +A  L  +M+E  +
Sbjct: 438 IRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGI 497

Query: 427 GPD 429
            P+
Sbjct: 498 LPN 500



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 223/456 (48%), Gaps = 6/456 (1%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  +L    +  KL++  DL   M +   +P+   ++ L+S   K+   K+   V+ L  
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM---KKYDVVIYLWE 105

Query: 73  QNKSLP---DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           Q + L    ++ T N+L+N +C    L  A     +M  L   PD+VT+ +L+N F    
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGD 165

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R  +A  + D + E G +PN V +N +I   CK  ++D A  ++  ME +G  PD VTYN
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +LI   C +G  ++A RM+  M ++ +  +  T N ++     E ++ EA  L     +R
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRR 285

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               D V+Y  LI G     + + A +++  M  +   P   TY+ +I G  +S K E  
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           + +  E+ Q G++ +  T+  +I G+C  G++  A +    MV     P+I+T N+LL G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHG 405

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC  G +EKAL         G   D VTYN +I  +CK   + DA+ L   +  K L PD
Sbjct: 406 LCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPD 465

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
            +TY A+   L + G   EA      M E G + ++
Sbjct: 466 IWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 212/435 (48%), Gaps = 17/435 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L+++  L   M   + LP +  ++ L++   +  +      L +++   GI  N  T NI
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++  +C+  ++  A   +  M + G  PD VT+ +L++  C+   + +A  M D M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + N +  NTI+  LC  K++D A  LLN     G   D V+Y +LI+G     + + A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           ++   M +R+I P  FT+NA+I    + G+  +A ++  E+++  + PD  T++ +I+G 
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   ++++A Q    MV K   PD+VT +IL++G C+   +E  +K F     +G   ++
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTY  LI   C+  +L  A  +   M    + P+  TY  +   L ++G++E+A    + 
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M ++G                 +D   ++Y+  I   C  G   DA  ++     KG+  
Sbjct: 422 MQKSG-----------------MDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464

Query: 516 NKSTYMNLMNGLIKR 530
           +  TY  +M GL K+
Sbjct: 465 DIWTYTAMMLGLYKK 479



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 170/318 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V YNTI+D L K  +++   DLL+ M+  G+ P+  TYN L+SG C  G   +A R+
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRM 243

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  MT+ +  PDV+T+N LI+     G + EA  L +EM    L PD+VTY+ LI     
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             R  EA ++   +   G  P+ VT++I+I  YCK  K++   K+   M + G   + VT
Sbjct: 304 YSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LI   C+AG +  A  +   M   G+  N IT N +LH LC   K+++A ++L    
Sbjct: 364 YTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   D V+Y  +I G  +  +   A  L+  +  + + P  +TY AM+ GL + G   
Sbjct: 424 KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRG 483

Query: 308 QAIDMLNELLQSGMIPDE 325
           +A  +  ++ + G++P+E
Sbjct: 484 EADALFRKMKEDGILPNE 501



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 184/400 (46%), Gaps = 52/400 (13%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D +  +  +M +    P    ++ L+ A  K    +    + + M   G+  N  T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +L+  C   +L  A   L    K G+  D V++G+L+ G+ R ++   AL ++D M E 
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS------- 337
              P+   YN +I GL +S + + A+D+LN +   G+ PD  T+N++I G C+       
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 338 ----------------------------EGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
                                       EG++ +A + + +M+ +S  PDIVT ++L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC    L++A + F   + KG   D VTY+ LI+  CK +++E    L  EM ++ +  +
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY  +      +G+L  A++    MV  G                 + P+ I+Y+  +
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG-----------------VPPNIITYNVLL 403

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  C  G+ + AL I  + ++ G+  +  TY  ++ G+ K
Sbjct: 404 HGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCK 443



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 147/294 (50%), Gaps = 20/294 (6%)

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  L++   + +K +  + LW++M+   I  +  T N ++    +  +   A+  L +++
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMM 143

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G  PD  TF ++++GFC   ++  AL   ++MVE  ++P++V  N ++ GLC+   ++
Sbjct: 144 KLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVD 203

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            AL       + G   D+VTYN+LIS LC   R +DA  ++S M ++++ PD +T+ A+ 
Sbjct: 204 NALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALI 263

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVV-------------------QPNTSKTPEEI 478
            A V+ GR+ EA++    M+    ++  +V                   Q       +  
Sbjct: 264 DACVKEGRISEAEELYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGC 322

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            P  ++YS  IN +C   + +  +++F E  Q+G+  N  TY  L+ G  +  K
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 140/293 (47%), Gaps = 18/293 (6%)

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  ++    R  K + +L L+  M + + +PS   ++ ++  +S+  K +  I +  ++ 
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+  +  T N +++ FC   Q+  AL F  KM++   +PDIVT   LL+G CR   + 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            AL  F   +  G   + V YNT+I  LCK +++++A  LL+ ME   + PD  TY ++ 
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 438 TALVESGRLEEAQKFTSIMVE----------TGKINHQVVQPNTSKTPE--------EID 479
           + L  SGR ++A +  S M +             I+  V +   S+  E         +D
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P  ++YS  I   C   R  +A Q+F     KG   +  TY  L+NG  K +K
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 219/398 (55%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD   YN ++    K  ++     +L+ MK +G +P+  TYNI++   C    L  A++V
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D +  +  +P V TY +LI      G + EA +L +EM +  LLPD+ TYN +I    +
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A +LI  L   G KP+ +++NI+++ +  +GK D+  K+V  M   G  P+ VT
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI + C+ G ++EA  ++ VM  K L  +T + + ++  LC E +LD A  +++   
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D V+Y T++    ++  AN+AL+++++++     P+  +YN MI  L   G   
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ M+  ++  G+ PDE T+N++I   C +G VE+A+   + M +  F+P +++ NI+L
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            GLC+   ++ A+  F   I KG   +  TY  LI  +
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 221/412 (53%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+   YN ++SG+CK+  ++ A +V++ M     LPD+ TYN++I   CN   L  A ++
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++     +P V+TY  LI      G   EA KL++E+   G+ P+  T+N +I+  CK
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           EG +++A +++ ++   G  PD ++YN L+ A    G  +E  +++  M  +G + N +T
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            + ++ +LC   ++DEA  +L    ++    D  SY  LI+   ++ + + A+ + D M 
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
               +P    YN ++  L ++G   QA+++ N+L   G  P+ +++NT+I    S G   
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL     M+ K   PD +T N L+S LCR+G++E+A+         G     ++YN ++
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             LCK RR++DA G+ +EM EK   P+  TY  +   +  +G   EA +  +
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELAN 546



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 220/425 (51%), Gaps = 5/425 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LPD VTYN ++ +L  + KL     +L  +     +P   TY IL+      G 
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG 222

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM++++ M     LPD++TYN +I G C  GM+E A  L   + S    PDV++YN 
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F   G+  E  KL+ E+   G +PN VT++I+I   C+ G+ID+A  +++ M E  
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  +Y+ LI A CK G ++ A  +MD M   G   + +  NTIL  LC     ++A 
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N     G   +  SY T+I+  +     +RAL +   M  + + P   TYN++I  L
Sbjct: 403 EIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCL 462

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+AI +L+++ QSG  P   ++N ++ G C   +++ A+    +M+EK  +P+ 
Sbjct: 463 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNE 522

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  +L+ G+   G   +A++   S   +    D ++ ++    L K   + D +  LS 
Sbjct: 523 TTYILLIEGIGFAGWRTEAMELANSLFSR----DVISQDSF-KRLNKTFPMLDVYKELSN 577

Query: 421 MEEKK 425
            E KK
Sbjct: 578 SETKK 582



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 239/479 (49%), Gaps = 22/479 (4%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L++  CK G   E++  ++ +      PDV     LI G+ N   +E+A R+ + +ES  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-H 132

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
             PDV  YN +I+ F +  R   A ++++ +   G  P+ VT+NIMI   C   K+  A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           K++  +  +   P  +TY  LI+A    G + EA ++++ M  +GL  +  T N I+  +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C E  ++ A  L+ S + +G   D +SY  L+  +    K +   KL  EM  R   P+ 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TY+ +I  L + G+ ++AI +L  +++  + PD  +++ +I   C EG+++ A+   + 
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL--CKE 408
           M+     PDIV  N +L+ LC+ G   +AL+ F      G   +  +YNT+IS+L  C +
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           R    A G++  M  K + PD  TY ++ + L   G +EEA      M ++G        
Sbjct: 433 R--SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG-------- 482

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                      P+ ISY+  +   C   R  DA+ +F E  +KG   N++TY+ L+ G+
Sbjct: 483 ---------FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 211/436 (48%), Gaps = 31/436 (7%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+NR  ++G+  E+   ++ L   G  P+ +    +IK +     I+KA +++  +E + 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   YN +I   CK   +E A ++++ M  +G   + +T N ++ +LC  +KL  A 
Sbjct: 134 -EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+           ++Y  LI     +   N A+KL +EM  R ++P  +TYNA+I G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A +++  L   G  PD  ++N ++  F ++G+ ++  +   +M  +  +P+ 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT +IL+S LCR G +++A+   +  I K    D+ +Y+ LIS+LCKE RL+ A G++  
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------- 473
           M      PD   Y  I  AL ++G   +A +  +      K+      PN S        
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFN------KLRGMGCPPNVSSYNTMISA 426

Query: 474 -----------------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
                              + +DP  I+Y+  I+  C  G  ++A+ + ++  Q G    
Sbjct: 427 LWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486

Query: 517 KSTYMNLMNGLIKRRK 532
             +Y  ++ GL K R+
Sbjct: 487 VISYNIVLLGLCKVRR 502



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 157/378 (41%), Gaps = 94/378 (24%)

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF---RDEKANRALKLWD 279
           L  +L+  C   K +E+   L     +GY  D +    LI G+F     EKA+R +++ +
Sbjct: 71  LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE 130

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS-- 337
              E    P  F YNA+I G  +  + E A  +LN +   G +PD  T+N +I   C+  
Sbjct: 131 SHTE----PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186

Query: 338 ---------------------------------EGQVEKALQFHNKMVEKSFKPDIVTCN 364
                                            EG + +A++   +M+ +   PD+ T N
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVD------------------------------ 394
            ++ G+C+EG++E+A +   S   KG   D                              
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 395 -----SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
                 VTY+ LISSLC+  R+++A  +L  M EK+L PD Y+Y  + +AL + GRL+ A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 M+  G +                 P  ++Y+  +   C  G    AL+IF + R
Sbjct: 367 IGIMDYMISNGCL-----------------PDIVNYNTILAALCKNGNANQALEIFNKLR 409

Query: 510 QKGIAINKSTYMNLMNGL 527
             G   N S+Y  +++ L
Sbjct: 410 GMGCPPNVSSYNTMISAL 427



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 52/257 (20%)

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC--------------------- 363
           ET    +++  C  G+  ++L F   +V K + PD++ C                     
Sbjct: 68  ETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME 127

Query: 364 -------------NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
                        N ++SG C+   +E A +       +G   D VTYN +I SLC  R+
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN------- 463
           L  A  +L ++      P   TY  +  A +  G + EA K    M+  G +        
Sbjct: 188 LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247

Query: 464 -----------HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
                       +  +  TS T +   P  ISY+  +    +QG++ +  ++  E   +G
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 513 IAINKSTYMNLMNGLIK 529
              NK TY  L++ L +
Sbjct: 308 CEPNKVTYSILISSLCR 324


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 235/456 (51%), Gaps = 10/456 (2%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N IL  L  KGKL     L+  M ++  +P   +   L+ G  KL   + A RV+
Sbjct: 38  DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 97

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M  +  +PD+ TYNML+ G C  G+L+ A  L  EM      PD +TYNT++   F+ 
Sbjct: 98  KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 157

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +A     +    G     +T+ ++I+  CK     +A +++ +M   G  PD VTY
Sbjct: 158 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 217

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE---KKLDEAYMLLNS 245
           N+L++  CK G  E+   ++  +   G+  NT+T NT+LH+LC      ++DE  +++N+
Sbjct: 218 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 277

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            S+       V+Y  LI G  +    +RA+  +D+M     +P   TYN ++  L + G 
Sbjct: 278 TSQPPTV---VTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGM 334

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A+ +L+ L  +   P   T+N +I G   +G +EKA++ + +M+E+ F PD +T   
Sbjct: 335 VDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRT 394

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L  GL R  ++E AL   +    + + + +  +  +I  LCK+++++ A  +L  M   +
Sbjct: 395 LFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQ 454

Query: 426 LGPDRYTYAAIHTALVESGRLEEA----QKFTSIMV 457
             P+   Y+AI   +  +G +EEA    QK T + V
Sbjct: 455 CKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKV 490



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 176/354 (49%), Gaps = 1/354 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD +TYNTIL  +F  G  ++      D  ++G      TY +L+   CK     +A
Sbjct: 139 GCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQA 198

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V++ M      PD+ TYN L+N  C  G  E+   +   + S  + P+ VTYNTL++ 
Sbjct: 199 MEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHS 258

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   E  +++  ++     P  VT+NI+I   CK G +D+A      M  +   PD
Sbjct: 259 LCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPD 318

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTL+ A CK G ++EA  ++  +         IT N ++  L  +  +++A  L  
Sbjct: 319 IITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYG 378

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG+  D++++ TL  G FR +    AL +  EM +R        +  +I GL +  
Sbjct: 379 EMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKK 438

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFK 357
           K + AI +L  ++ S   P+E  ++ II G  + G +E+A Q H K+ E K F+
Sbjct: 439 KVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFR 492



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 185/389 (47%), Gaps = 9/389 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +TYN ++  L KKG L    +LL +M   G  P+  TYN ++      G   +A
Sbjct: 104 GGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQA 163

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +       +      + TY +LI   C      +A  + ++M      PD+VTYN+L+N 
Sbjct: 164 IGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNY 223

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +   +I  L  HG+ PN VT+N ++   C  G  D+  +I+  M      P 
Sbjct: 224 TCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPT 283

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  CK G ++ A    D M       + IT NT+L  LC E  +DEA  LL+
Sbjct: 284 VVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLH 343

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S +        ++Y  +I G  +     +A++L+ EM ER   P   T+  + WGL +  
Sbjct: 344 SLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLD 403

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E A+ +L E+ +       + F  +IHG C + +V+ A+Q    MV    KP+    +
Sbjct: 404 LVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYS 463

Query: 365 ILLSGLCREGILEKA---------LKFFR 384
            ++ G+   G++E+A         LK FR
Sbjct: 464 AIIKGVGAAGMIEEANQLHQKLTELKVFR 492



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 197/416 (47%), Gaps = 17/416 (4%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T N ++      G+ + A +LID +      P   +   +I+   K    ++A ++++ M
Sbjct: 41  TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 100

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             +G  PD +TYN L+   CK G ++ A  ++D M   G   + IT NTIL  +      
Sbjct: 101 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 160

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+A        ++G     ++Y  LI    +     +A+++ ++M      P   TYN++
Sbjct: 161 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 220

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +    + GK E    ++  LL  GM P+  T+NT++H  C+ G  ++  +    M   S 
Sbjct: 221 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQ 280

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P +VT NIL++GLC+ G+L++A+ FF   +      D +TYNTL+++LCKE  +++A  
Sbjct: 281 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 340

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL  + + +  P   TY  +   L + G +E+A +    M+E G                
Sbjct: 341 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERG---------------- 384

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              P  I++             +DAL I +E  ++   I  S +  +++GL K++K
Sbjct: 385 -FAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKK 439



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 86/178 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    CLPD +TYNT+L AL K+G ++E   LL  +      P   TYNI++ G  K G 
Sbjct: 310 MVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGC 369

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++AM +   M +    PD  T+  L  G     ++E+A  + KEM           +  
Sbjct: 370 MEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRF 429

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           +I+   +  +   A ++++ +     KPN   ++ +IK     G I++A ++ + + E
Sbjct: 430 VIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTE 487


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 229/420 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V +N +L A+ K  K + V  L   M+  G+  +  T+NI+++ +C    +  A+ 
Sbjct: 82  FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    PD  T   L+NG+C    + +A  L  +M  +   PD+V YN +I+   
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++ R  +AF    E++  GI+PN VT+  ++   C   +   A +++ +M +   +P+ +
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY+ L+DA  K G + EA  + + M R  +  + +T +++++ LC   ++DEA  + +  
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   D VSY TLI G+ + ++    +KL+ EM +R ++ +T TYN +I G  Q+G  
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A +  +++   G+ PD  T+N ++ G C  G++EKAL     M ++    DIVT   +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E+A   F S  LKG   D VTY T++S LC +  L +   L ++M+++ L
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 224/439 (51%), Gaps = 6/439 (1%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DVW 81
           KLN+  DL SDM K    P+   +N L+S   KL   K+   V+ L  + + L    D++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL---KKYDVVISLGKKMEVLGIRNDLY 121

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N++IN +C    +  A  +  +M  L   PD VT  +L+N F    R  +A  L+D++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            E G KP+ V +N +I   CK  +++ A    + +E  G  P+ VTY  L++  C +   
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            +A R++  M +K +  N IT + +L       K+ EA  L     +     D V+Y +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G    ++ + A +++D M  +  +    +YN +I G  ++ + E  + +  E+ Q G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           + +  T+NT+I GF   G V+KA +F ++M      PDI T NILL GLC  G LEKAL 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F     +   +D VTY T+I  +CK  ++E+A+ L   +  K L PD  TY  + + L 
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 442 ESGRLEEAQKFTSIMVETG 460
             G L E +   + M + G
Sbjct: 482 TKGLLHEVEALYTKMKQEG 500



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 208/379 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T+N +++      +++    +L  M K G  P+R T   LV+G+C+   
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +VD M +    PD+  YN +I+  C    + +AF   KE+E   + P+VVTY  
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N    S R  +A +L+ ++ +  I PN +T++ ++  + K GK+ +A ++   M    
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY++LI+  C    ++EA +M D+M  KG   + ++ NT+++  C  K++++  
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G+F+    ++A + + +M    I P  +TYN ++ GL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G+ E+A+ +  ++ +  M  D  T+ T+I G C  G+VE+A      +  K  KPDI
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470

Query: 361 VTCNILLSGLCREGILEKA 379
           VT   ++SGLC +G+L + 
Sbjct: 471 VTYTTMMSGLCTKGLLHEV 489



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 229/459 (49%), Gaps = 17/459 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  +N L++        +    L K+ME L +  D+ T+N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F    +   A  ++ ++ + G +P+ VT   ++  +C+  ++  A  +V  M E G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD V YN +ID+ CK   + +AF     + RKG++ N +T   +++ LC   +  +A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   K+    + ++Y  L+  + ++ K   A +L++EM    I P   TY+++I GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               + ++A  M + ++  G + D  ++NT+I+GFC   +VE  ++   +M ++    + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L+ G  + G ++KA +FF      G + D  TYN L+  LC    LE A  +  +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+++++  D  TY  +   + ++G++EEA      +   G                 + P
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-----------------LKP 468

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             ++Y+  ++  C++G   +   ++ + +Q+G+  N  T
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 220/432 (50%), Gaps = 17/432 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L +A  L  +M   +  P +V +N L++   +  +      L  +++  GI+ +  T NI
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C   ++  A  I+  M + G+ PD VT  +L++  C+   + +A  ++D M   G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            K + +  N I+ +LC  K++++A+       ++G   + V+Y  L+ G     + + A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  +M +++I P+  TY+A++    ++GK  +A ++  E+++  + PD  T++++I+G 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   ++++A Q  + MV K    D+V+ N L++G C+   +E  +K FR    +G   ++
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYNTLI    +   ++ A    S+M+   + PD +TY  +   L ++G LE+A      
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL----- 420

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                     V+  +  K   E+D   ++Y+  I   C  G+ ++A  +F     KG+  
Sbjct: 421 ----------VIFEDMQK--REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

Query: 516 NKSTYMNLMNGL 527
           +  TY  +M+GL
Sbjct: 469 DIVTYTTMMSGL 480



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 180/389 (46%), Gaps = 18/389 (4%)

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           ++ K++ A  +  +M ++   P  V +N L+ A  K    +    +   M   G++ +  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +++  CC  ++  A  +L    K GY  D V+ G+L+ G+ R  + + A+ L D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            E    P    YNA+I  L ++ +   A D   E+ + G+ P+  T+  +++G C+  + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             A +  + M++K   P+++T + LL    + G + +A + F   +      D VTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I+ LC   R+++A  +   M  K    D  +Y  +     ++ R+E+  K    M + G 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 462 INHQVV---------QPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQ 503
           +++ V          Q       +E         I P   +Y+  +   C  G  + AL 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           IFE+ +++ + ++  TY  ++ G+ K  K
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGK 450


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 224/427 (52%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            +P  V +  +L A+ K  K + V  L   M+  G+  +  ++ IL+  +C+      A+ 
Sbjct: 612  IPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALA 671

Query: 67   VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            ++  M +    P + T   L+NG+C     +EA  L   M  L L P+VV YNT+IN   
Sbjct: 672  LLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLC 731

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            ++     A ++   +++ GI  +AVT+N +I   C  G+   A +++R+M +    P+ +
Sbjct: 732  KNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI 791

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
             +  LID   K GN+ EA  +   M R+ +  N +T N++++  C + +L +A  + +  
Sbjct: 792  FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851

Query: 247  SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              +G + D V+Y TLITG+ + ++    +KL+ EM  + ++   FTYN +I G  Q+GK 
Sbjct: 852  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911

Query: 307  EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
              A  + N ++  G+ PD  T+N ++   C+ G++EKAL     + +     DI+T NI+
Sbjct: 912  NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971

Query: 367  LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
            + G+CR   +++A   FRS   KG  +D++ Y T+IS LC+     +A  L + M+E   
Sbjct: 972  IQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGF 1031

Query: 427  GPDRYTY 433
             P    Y
Sbjct: 1032 MPSERIY 1038



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 214/436 (49%)

Query: 25   KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
            K ++   L  +M +   +P+   +  +++   K+      + +   M       D++++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 85   MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            +LI+ +C       A  L  +M  L   P +VT  +L+N F +  R  EA  L+D + E 
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 145  GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
            G++PN V +N +I   CK   ++ A +I   ME+ G   D VTYNTLI   C +G   +A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 205  FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             R++  M ++ +  N I    ++ T   E  L EA  L     +R  + + ++Y +LI G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 265  YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            +    +   A  ++D M  +   P   TYN +I G  +S + E  + +  E+   G++ D
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 325  ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              T+NT+IHG+C  G++  A +  N+MV+    PDIVT NILL  LC  G +EKAL    
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 385  SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                    VD +TYN +I  +C+  ++++A+ L   +  K +  D   Y  + + L  +G
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 445  RLEEAQKFTSIMVETG 460
               EA K  + M E G
Sbjct: 1015 LRREADKLCTRMKEDG 1030



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 166/644 (25%), Positives = 270/644 (41%), Gaps = 126/644 (19%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+  ++DA  K+G L+E ++L   M +  + PN  TYN L++G C  G L  A + 
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKT 298

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            DLM      P+V TYN LING+C +  +E+  +L + M    L+ D  TYNTLI+ + +
Sbjct: 299 FDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQ 358

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTH---------------------------------- 153
            G+   A  +   +   G+ P+ +TH                                  
Sbjct: 359 VGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVA 418

Query: 154 -NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA---FRMM- 208
            NIMI   CK  K+++A ++   +   G  PD  TY  +I   CK G   EA   FR M 
Sbjct: 419 YNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK 478

Query: 209 ----------DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
                       +G  G   N ++L TI+  +C +++      ++ S     YY D   +
Sbjct: 479 EDGIICQAEDGHLGEHGTN-NQVSLGTII--ICPKRRRS----IMESGDLYYYYSDTTLW 531

Query: 259 GTLI-----------TGYFRDE-------------------------------------- 269
            +L+            G+ R                                        
Sbjct: 532 SSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSEL 591

Query: 270 ---KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
              K + A  L+ EM + + +PS   +  ++  +++  K +  I + +++   G+  D  
Sbjct: 592 HCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLY 651

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           +F  +IH FC   +   AL    KM++  F+P IVT   LL+G C+    ++A+    S 
Sbjct: 652 SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
              G   + V YNT+I+ LCK R L +A  +   ME+K +  D  TY  + + L  SGR 
Sbjct: 712 AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771

Query: 447 EEAQKFTSIMVE----------TGKINHQVVQPNTSKTP--------EEIDPSSISYSEK 488
            +A +    MV+          T  I+  V + N  +            + P+ ++Y+  
Sbjct: 772 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           IN  C QGR  DA  +F+    KG   +  TY  L+ G  K ++
Sbjct: 832 INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 214/418 (51%), Gaps = 1/418 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  +L A+    +   V      M+  G+  +  ++ IL+  +C+   L  A+ 
Sbjct: 62  LPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALS 121

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T+  L++G+C    + +AF L   M      P+VV YNTLI+   
Sbjct: 122 ILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLC 181

Query: 127 ESGRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           ++G    A +L++E+++ G +  + VT+N ++   C  G+  +A +I+R+M +   +PD 
Sbjct: 182 KNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDV 241

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            T+  LIDA  K GN++EA  +   M +  +  NT+T N++++ LC   +L  A    + 
Sbjct: 242 FTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDL 301

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            + +G + + V+Y TLI G+ +  +    +KL+  M    ++  TFTYN +I G  Q GK
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
              A D+ + ++  G+ PD  T   ++HG C  G++  A+   N M        IV  NI
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           ++ GLC+   +E+A + F    ++G   D+ TY  +I  LCK     +A  L   M+E
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 196/382 (51%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G   D  ++  ++    +  + +    LL  M K G  P+  T   L++G+C+   
Sbjct: 641  MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +EA+ +VD M +    P+V  YN +ING C    L  A  +   ME   ++ D VTYNT
Sbjct: 701  FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI+    SGR  +A +L+ ++ +  I PN +    +I  + KEG + +A  + + M    
Sbjct: 761  LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              P+ +TYN+LI+  C  G + +A  M D+M  KG   + +T NT++   C  K++++  
Sbjct: 821  VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L    + +G   D  +Y TLI GY +  K N A K+++ M +  + P   TYN ++  L
Sbjct: 881  KLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              +GK E+A+ M+ +L ++ M  D  T+N II G C   +V++A      +  K  K D 
Sbjct: 941  CNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDA 1000

Query: 361  VTCNILLSGLCREGILEKALKF 382
            +    ++SGLCR G+  +A K 
Sbjct: 1001 IAYITMISGLCRNGLRREADKL 1022



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 215/448 (47%), Gaps = 6/448 (1%)

Query: 21  FKKGKLNEVR-----DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
            + G L+ +R     DL  +M +   +P+   +  L++    L   +  +     M    
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
              D++++ +LI+ +C    L  A  +  +M  L   P +VT+ +L++ F    R  +AF
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDA 194
            L+  + + G +PN V +N +I   CK G ++ A +++  ME+ G  + D VTYNTL+  
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C +G   +A R++  M ++ +  +  T   ++     +  LDEA  L     +     +
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
            V+Y +LI G     +   A K +D M  +   P+  TYN +I G  +S + E  + +  
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQ 335

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            + + G++ D  T+NT+IHG+C  G++  A    + MV     PDI+T  ILL GLC  G
Sbjct: 336 RMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNG 395

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +  A+  F       K +  V YN +I  LCK  ++E+A+ L   +  + + PD  TY 
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYT 455

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKI 462
            +   L ++G   EA +    M E G I
Sbjct: 456 IMILGLCKNGPRREADELFRRMKEDGII 483



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 218/434 (50%), Gaps = 17/434 (3%)

Query: 96   LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
             ++AF L  EM   + +P +V +  ++    +  +      L  +++  GI  +  +  I
Sbjct: 596  FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655

Query: 156  MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
            +I  +C+  +   A  ++  M + GF P  VT  +L++  C+    +EA  ++D M   G
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 216  LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            L+ N +  NT+++ LC  + L+ A  +     K+G   D V+Y TLI+G     +   A 
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 276  KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            +L  +M +R+I P+   + A+I    + G   +A ++  E+++  + P+  T+N++I+GF
Sbjct: 776  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 336  CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
            C +G++  A    + MV K   PD+VT N L++G C+   +E  +K F     +G   D+
Sbjct: 836  CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 396  VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
             TYNTLI   C+  +L  A  + + M +  + PD  TY  +   L  +G++E+A     +
Sbjct: 896  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL----V 951

Query: 456  MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
            MVE        +Q N      ++D   I+Y+  I   C   + K+A  +F    +KG+ +
Sbjct: 952  MVED-------LQKN------QMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKL 998

Query: 516  NKSTYMNLMNGLIK 529
            +   Y+ +++GL +
Sbjct: 999  DAIAYITMISGLCR 1012



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/294 (37%), Positives = 161/294 (54%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G + D VTYNT++  L   G+  +   LL DM K+ + PN   +  L+  + K G 
Sbjct: 746  MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 805

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA  +   M +    P++ TYN LING+C  G L +A  +   M S    PDVVTYNT
Sbjct: 806  LLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNT 865

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI  F +S R  +  KL  E+   G+  +A T+N +I  YC+ GK++ A K+   M + G
Sbjct: 866  LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD VTYN L+D  C  G +E+A  M++ + +  + ++ IT N I+  +C   K+ EA+
Sbjct: 926  VPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAW 985

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
             L  S +++G  LD ++Y T+I+G  R+     A KL   MKE   MPS   Y+
Sbjct: 986  CLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 248/568 (43%), Gaps = 45/568 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ V YNT++D L K G +N   +LL++M+K+G L  +  TYN L++G C  G  ++A R
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAAR 227

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  MT+ +  PDV+T+  LI+ +   G L+EA  L K+M    + P+ VTYN+LIN   
Sbjct: 228 ILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLC 287

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR   A K  D +   G  PN VT+N +I  +CK  +++   K+ + M   G   D  
Sbjct: 288 MHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTF 347

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYNTLI   C+ G +  A  +   M   G+  + IT   +LH LC   ++  A +  N  
Sbjct: 348 TYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                YL  V+Y  +I G  + +K   A +L+  +    + P   TY  MI GL ++G  
Sbjct: 408 RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 467

Query: 307 EQAIDMLNELLQSGMI-------------PDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            +A ++   + + G+I              ++ +  TII        + ++   +    +
Sbjct: 468 READELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSD 527

Query: 354 KSFKPDIVTCNILLSGLCREGILEKAL-----------KFFRSWILKGKAVDSVTYNTLI 402
            +    +V    + S    +G + + L           + F              Y   +
Sbjct: 528 TTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERL 587

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            S     + +DAFGL  EM + +  P    +  + TA+ +  + +        M   G I
Sbjct: 588 RSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLG-I 646

Query: 463 NHQVVQ--------PNTSKTPEEI-----------DPSSISYSEKINEHCSQGRYKDALQ 503
           +H +             S+    +            PS ++    +N  C   R+++A+ 
Sbjct: 647 SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRR 531
           + +   + G+  N   Y  ++NGL K R
Sbjct: 707 LVDSMAELGLEPNVVIYNTVINGLCKNR 734



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 181/358 (50%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  P  VT  ++L+   +  +  E   L+  M + GL PN   YN +++G CK   
Sbjct: 676  MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD 735

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L  A+ +   M +   + D  TYN LI+G CN+G   +A RL ++M   K+ P+V+ +  
Sbjct: 736  LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI+ F + G  +EA  L  E+    + PN +T+N +I  +C +G++  A  +   M   G
Sbjct: 796  LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD VTYNTLI   CK+  +E+  ++   M  +GL  +  T NT++H  C   KL+ A 
Sbjct: 856  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQ 915

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             + N     G   D V+Y  L+     + K  +AL + +++++ Q+     TYN +I G+
Sbjct: 916  KVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
             ++ K ++A  +   L + G+  D   + T+I G C  G   +A +   +M E  F P
Sbjct: 976  CRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMP 1033



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 192/385 (49%), Gaps = 1/385 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG   D  ++  ++    +  +L+    +L  M K G  P+  T+  L+ G+C    
Sbjct: 91  MELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNR 150

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYN 119
           + +A  +V  M ++   P+V  YN LI+  C  G +  A  L  EME   +L  D+VTYN
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL+     SG   +A +++ ++ +  I P+  T   +I  + K+G +D+A ++ + M ++
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+ VTYN+LI+  C  G +  A +  D+M  KG   N +T NT+++  C  +++++ 
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDG 330

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L     + G   D  +Y TLI GY +  K   A  ++  M    + P   T+  ++ G
Sbjct: 331 MKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHG 390

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L  +G+   A+   N++           +N +IHG C   +VE+A +   ++  +  KPD
Sbjct: 391 LCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPD 450

Query: 360 IVTCNILLSGLCREGILEKALKFFR 384
             T  I++ GLC+ G   +A + FR
Sbjct: 451 ARTYTIMILGLCKNGPRREADELFR 475



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 216/448 (48%), Gaps = 21/448 (4%)

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L  G+ ++   E+A  L  EM   + LP VV +  L+       R         +++  G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I  +  +  I+I  +C+  ++  A  I+  M + G+ P  VT+ +L+   C    + +AF
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG-YYLDEVSYGTLITG 264
            ++  M + G + N +  NT++  LC    ++ A  LLN   K+G    D V+Y TL+TG
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                +  +A ++  +M +R+I P  FT+ A+I    + G  ++A ++  ++LQS + P+
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+N++I+G C  G++  A +  + M  K   P++VT N L++G C+   +E  +K F+
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQ 335

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY----------A 434
               +G   D+ TYNTLI   C+  +L  A  + S M    + PD  T+           
Sbjct: 336 RMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNG 395

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--------SKTP-EEIDPSSISY 485
            I +A+V+   +   +K+  I+     I H + + +          + P E + P + +Y
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMI-HGLCKADKVEEAWELFCRLPVEGVKPDARTY 454

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGI 513
           +  I   C  G  ++A ++F   ++ GI
Sbjct: 455 TIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 170/329 (51%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  P+ V YNT+++ L K   LN   ++   M+K+G+V +  TYN L+SG C  G 
Sbjct: 711  MAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGR 770

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              +A R++  M + K  P+V  +  LI+ +   G L EA  L KEM    + P+++TYN+
Sbjct: 771  WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNS 830

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LIN F   GR  +A  + D +   G  P+ VT+N +I  +CK  +++   K+   M   G
Sbjct: 831  LINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
               D  TYNTLI   C+AG +  A ++ + M   G+  + +T N +L  LC   K+++A 
Sbjct: 891  LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +++    K    +D ++Y  +I G  R++K   A  L+  +  + +      Y  MI GL
Sbjct: 951  VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             ++G   +A  +   + + G +P E  ++
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 130/291 (44%), Gaps = 19/291 (6%)

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L TG+    +   AL L+ EM + Q +PS   +  ++  ++   + E  I    ++   G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +  D  +F  +IH FC   ++  AL    KM++  + P IVT   LL G C    +  A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KLGPDRYTYAAIHTA 439
               S +  G   + V YNTLI  LCK   +  A  LL+EME+K +L  D  TY  + T 
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 440 LVESGRLEEAQKFTSIMVE----------TGKINHQVVQPNTSKTPE--------EIDPS 481
           L  SG   +A +    M +          T  I+  V Q N  +  E         I P+
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +++Y+  IN  C  GR   A + F+    KG   N  TY  L+NG  K R+
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRR 326



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 1/136 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD VTYN +LD L   GK+ +   ++ D++K  +  +  TYNI++ G C+   +KEA
Sbjct: 925  GVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEA 984

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +   +T+     D   Y  +I+G C  G+  EA +L   M+    +P    Y+  +  
Sbjct: 985  WCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRD 1044

Query: 125  FFESGRSMEAFKLIDE 140
             + S  S E  K + E
Sbjct: 1045 HYTS-LSAELIKAVHE 1059


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 260/500 (52%), Gaps = 18/500 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y  +L+ L K       + +L  M K+ +      +  ++  Y + G L+ AMR +
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXL 192

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M +    PD+   N  I+       L++A R  + M+ +++ P+V+TYN LI  + + 
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDL 252

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVT 187
            R  +A +LI E+   G  P+ +++  ++ + CKE +I +   ++  M +++   PD VT
Sbjct: 253 HRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVT 312

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT +    K G+ +EA   +     +  +++ +  + I+H+ C E ++D+A  ++N   
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D V+Y ++I G  ++ K ++A K+  +M +    P+T +Y A++ GL ++G + 
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A +M+N   +   IP+  T++ ++HGF  EG+  +A     +M++K F P  V  N+L+
Sbjct: 433 EAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+E  +++A +F    +  G AV+ V + T+I   C++  LE A  LL +M      
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH 552

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  I  AL + GR+EEA K    M+  G I                 P+ ++Y  
Sbjct: 553 PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWI-----------------PTPVTYRT 595

Query: 488 KINEHCSQGRYKDALQIFEE 507
            I+++C  GR +D L++ E+
Sbjct: 596 VIHQYCRMGRVEDLLKLLEK 615



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 240/479 (50%), Gaps = 8/479 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD    NT +  L    +L++    L  M+   + PN  TYN L+ GYC L  
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHR 254

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE-AFRLRKEMESLKLLPDVVTYN 119
           L++A  ++  M      PD  +Y  ++   C    ++E    + K ++   LLPD VTYN
Sbjct: 255 LEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYN 314

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T ++   + G   EA + + E +E   + + V ++ ++  +C+EG++DKA +IV  M   
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY ++I+  C+   +++A +M+  M + G K NT++   +L+ LC      EA
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++Y  L+ G+ R+ K++ A  L  EM ++   P+    N +I  
Sbjct: 435 REMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 494

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L Q  K ++A   + + L +G   +   F T+IHGFC +  +E AL   + M   +  PD
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT   ++  L ++G +E+A K     +  G     VTY T+I   C+  R+ED   LL 
Sbjct: 555 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLE 614

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KIN----HQVVQPNTSK 473
           +M  ++    R  Y  +   L   G LE+A K    ++ T  KI+    H +++   SK
Sbjct: 615 KMLSRQ--ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSK 671



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 235/462 (50%), Gaps = 3/462 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           GC PD ++Y T++  L K+ ++ E+R L+  M K   L+P++ TYN  V    K G   E
Sbjct: 269 GCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 328

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +    + +   D   Y+ +++ +C  G +++A  +  EM S   +PDVVTY ++IN
Sbjct: 329 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVIN 388

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +  +  +A K++ ++ +HG KPN V++  ++   CK G   +A +++   EE  + P
Sbjct: 389 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIP 448

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TY+ L+    + G   EA  ++  M +KG     + +N ++ +LC E+K+DEA   +
Sbjct: 449 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G  ++ V++ T+I G+ + +    AL L D+M      P   TY  +I  L + 
Sbjct: 509 EQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKK 568

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E+A  +  ++L+ G IP   T+ T+IH +C  G+VE  L+   KM+  S +      
Sbjct: 569 GRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAY 626

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  LC  G LE+A K     +     +D+ T + LI S   +     ++ +   M  
Sbjct: 627 NQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFN 686

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           + L PD      +   L+  G+ EEA K     VE G+I+ Q
Sbjct: 687 RNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 728



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 184/386 (47%), Gaps = 22/386 (5%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           +P A  + +M+  Y + GK+  A + +  M++ G  PD    NT I        +++A R
Sbjct: 168 RPEAFGY-VMVS-YSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 225

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            ++ M    +  N IT N ++   C   +L++A  L+     +G   D++SY T + G+ 
Sbjct: 226 FLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYT-VMGFL 284

Query: 267 RDEKANRALKLWDE--MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             EK  + L+L  E  +K+  ++P   TYN  +  LS+ G  ++A++ L E  +     D
Sbjct: 285 CKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 344

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           +  ++ I+H FC EG+++KA +  N+M  K   PD+VT   +++GLC+E  +++A K  R
Sbjct: 345 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLR 404

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G   ++V+Y  L++ LCK     +A  +++  EE    P+  TY+ +       G
Sbjct: 405 QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREG 464

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +  EA      M++ G                   P+ +  +  I   C + +  +A + 
Sbjct: 465 KSSEACDLVREMIKKGFF-----------------PTPVEINLLIQSLCQEEKVDEAKRF 507

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
            E+    G A+N   +  +++G  ++
Sbjct: 508 MEQCLNNGCAVNVVNFTTVIHGFCQK 533



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 166/360 (46%), Gaps = 19/360 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D + Y  +++   K    + A R++ +M ++ ++        ++ +     KL  A 
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L    K G   D     T I       + ++A++  + M+  +I P+  TYN +I G 
Sbjct: 190 RXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGY 249

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPD 359
               + E A +++ E+   G  PD+ ++ T++   C E ++++      KM++ S   PD
Sbjct: 250 CDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPD 309

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N  +  L + G  ++AL+F R    +   VD V Y+ ++ S C+E R++ A  +++
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  K   PD  TY ++   L +  ++++A+K    M + G       +PNT        
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG------CKPNT-------- 415

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              +SY+  +N  C  G   +A ++   + +     N  TY  LM+G  +  KS S+A D
Sbjct: 416 ---VSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKS-SEACD 471


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 266/544 (48%), Gaps = 62/544 (11%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V++NT++    + G L +   ++   +  G   N  TY  L+ GYC+ G L +A+R++
Sbjct: 149 DAVSHNTLVAGYCRDGSLGDAERVVEAARASGTA-NVVTYTALIDGYCRSGRLADALRLI 207

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      PD +TYN ++ G C A   E+A  L +EM      P+ VT+ T I  F ++
Sbjct: 208 ASM---PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQN 264

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A +L++++ ++G  P+ + ++ ++  + + G++D+A K++  M      P+ V Y
Sbjct: 265 GLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCY 321

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N  +   C AG  EE   ++  M RK    N  T +T++++LC  + ++ A  +L    K
Sbjct: 322 NAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            GY  D VSY T+I+ +    +A+ ALKL   +K     P T ++NA++  L ++ +   
Sbjct: 382 YGYMPDVVSYNTIISCFSDQARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYD 438

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A++++ ++L+     +E TFN +I   C  GQV+ A++    M +    PDIVT + L++
Sbjct: 439 AVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN 498

Query: 369 GLCREGILEKALKFFRS----------------------WILKGKAV----------DSV 396
           G   +G+ E A   FRS                      W   G+ +          + V
Sbjct: 499 GFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEV 558

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           T+N LISSLC++  +  A  +  +M +  + PD +TY A+     E GRL++A KF S M
Sbjct: 559 TFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM 618

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
                                 +P +ISY+  +   C   R+KDA ++  E  +K    N
Sbjct: 619 --------------------PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPN 658

Query: 517 KSTY 520
           + T+
Sbjct: 659 EVTF 662



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 225/428 (52%), Gaps = 12/428 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T + A  + G L+   +LL  M K G  P+   Y+ LV+G+ + G + EA+
Sbjct: 247 CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEAL 306

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++++ M      P+   YN  + G C AG  EE   L  EM      P+  T++TLIN  
Sbjct: 307 KLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSL 363

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++     A ++++++ ++G  P+ V++N +I  +  + + D A K++++M      PD 
Sbjct: 364 CQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDT 420

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +++N ++   CKA    +A  ++  M +K  ++N +T N ++ +LC   ++ +A  +   
Sbjct: 421 ISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFEL 480

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K     D V+Y +LI G+        A  L+  M  R      F+YNA + GL  + +
Sbjct: 481 MPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAAR 537

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A +++ +++    +P+E TFN +I   C +G V +A+  + +M +    PDI T N 
Sbjct: 538 WDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNA 597

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++G   +G L+ ALKF  +   +    D+++YN+++  LC+  R +DA  L++EM  K 
Sbjct: 598 LINGYSEQGRLDDALKFLSTMPCEP---DTISYNSILKGLCRAERWKDAEKLVTEMLRKN 654

Query: 426 LGPDRYTY 433
             P+  T+
Sbjct: 655 CTPNEVTF 662



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 210/399 (52%), Gaps = 14/399 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PD + Y+T+++   + G+++E   LL+ M  +   PN   YN  + G C  G 
Sbjct: 277 MPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGR 333

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +E   ++  M +    P+  T++ LIN  C   ++E A  + ++M+    +PDVV+YNT
Sbjct: 334 WEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNT 393

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F +  R+ +A KL+  +     KP+ ++ N ++K  CK  +   A ++V  M +  
Sbjct: 394 IISCFSDQARADDALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKD 450

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE-A 239
              + +T+N LID+ C+ G +++A  + ++M +     + +T +++++    E+ LDE A
Sbjct: 451 CRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF-SEQGLDEMA 509

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + L  S   R    D  SY   + G     + + A +L  +M     +P+  T+N +I  
Sbjct: 510 FDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISS 566

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L Q G   +AID+  ++ + G+ PD  T+N +I+G+  +G+++ AL+F + M     +PD
Sbjct: 567 LCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPD 623

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
            ++ N +L GLCR    + A K     + K    + VT+
Sbjct: 624 TISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 179/363 (49%), Gaps = 25/363 (6%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P  ++ N LI   C    + +A R+++ +   G   + ++ NT++   C +  L +A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASG-AADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           + +A   G   + V+Y  LI GY R  +   AL+L   M    + P T+TYN ++ GL  
Sbjct: 173 VEAARASGT-ANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCC 228

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           + + EQA +++ E++++   P+E TF T I  FC  G +++A++   +M +    PD++ 
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + L++G    G +++ALK   + + +    ++V YN  +  LC   R E+   L++EM 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTMLCRP---NTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----SKTPEE 477
            K   P+  T++ +  +L ++  +E A +    M + G +   VV  NT     S     
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYM-PDVVSYNTIISCFSDQARA 404

Query: 478 ID-----------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            D           P +IS++  +   C   R+ DA+++  +  +K   IN+ T+  L++ 
Sbjct: 405 DDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDS 464

Query: 527 LIK 529
           L +
Sbjct: 465 LCQ 467



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 126/312 (40%), Gaps = 60/312 (19%)

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            I+ N ++  LC  ++L +A  +L +    G   D VS+ TL+ GY RD           
Sbjct: 116 VISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRD----------- 163

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
                                   G  E+ +    E  ++    +  T+  +I G+C  G
Sbjct: 164 ---------------------GSLGDAERVV----EAARASGTANVVTYTALIDGYCRSG 198

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           ++  AL+    M      PD  T N +L GLC     E+A +  R  I      + VT+ 
Sbjct: 199 RLADALRLIASM---PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFA 255

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           T I + C+   L+ A  LL +M +    PD   Y+ +     E GR++EA K        
Sbjct: 256 TQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL------- 308

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             +N  + +PNT           + Y+  +   C  GR+++  ++  E  +K    N +T
Sbjct: 309 --LNTMLCRPNT-----------VCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDAT 355

Query: 520 YMNLMNGLIKRR 531
           +  L+N L + R
Sbjct: 356 FSTLINSLCQNR 367


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 238/460 (51%), Gaps = 3/460 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V    ++  LF    +++   ++  ++  G  P+   YN +++G+C+   +  A +V
Sbjct: 90  PDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQV 148

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M      PD+ TYN+LI   C+ GML+ A   + ++      P VVTY  LI     
Sbjct: 149 LDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLL 208

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL+DE+ E  ++P+  T+N +I+  C+EG +D+A +I+ ++   G++PD +T
Sbjct: 209 QGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVIT 268

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+      G  E  + +M  M  +G + N +T + ++ ++C + K++E   LL    
Sbjct: 269 YNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMK 328

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K+G   D   Y  LI    ++ + + A+++ D M     +P    YN ++  L +  + +
Sbjct: 329 KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 388

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  +L + G  P+ +++N++     S G   +AL    +M++K   PD +T N L+
Sbjct: 389 EALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLI 448

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDS--VTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           S LCR+G++++A++      ++        V+YN ++  LCK  R+ DA  +L+ M +K 
Sbjct: 449 SCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKG 508

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
             P+  TY  +   +   G L +A+   + +V    I+  
Sbjct: 509 CRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEH 548



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 226/441 (51%), Gaps = 3/441 (0%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           K G  NE    L  +  +G  P+      L+ G      + +A++V+ ++ +N   PD+ 
Sbjct: 69  KAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHIL-ENHGHPDLI 127

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            YN +I G+C A  ++ A+++   M++    PD+VTYN LI      G    A +  ++L
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            +   KP  VT+ I+I+    +G ID+A K++  M E    PD  TYN++I   C+ G +
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + AF+++  +  KG   + IT N +L  L  + K +  Y L++    RG   + V+Y  L
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I+   RD K    + L  +MK++ + P  + Y+ +I  L + G+ + AI++L+ ++  G 
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD   +NTI+   C + + ++AL    K+ E    P+  + N + S L   G   +AL 
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS--EMEEKKLGPDRYTYAAIHTA 439
                + KG   D +TYN+LIS LC++  +++A  LL   EME  +  P   +Y  +   
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L +  R+ +A +  + MV+ G
Sbjct: 488 LCKVSRVSDAIEVLAAMVDKG 508



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 234/476 (49%), Gaps = 16/476 (3%)

Query: 52  VSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL 111
           +S  CK G   E++  +  +      PDV     LI+G   +  +++A ++   +E+   
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH 123

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
            PD++ YN +I  F  + R   A++++D +   G  P+ VT+NI+I   C  G +D A +
Sbjct: 124 -PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
               + +    P  VTY  LI+A    G ++EA +++D M    L+ +  T N+I+  +C
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
            E  +D A+ +++S S +GY  D ++Y  L+ G     K     +L  +M  R    +  
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TY+ +I  + + GK E+ + +L ++ + G+ PD   ++ +I   C EG+V+ A++  + M
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           +     PDIV  N +L+ LC++   ++AL  F      G + ++ +YN++ S+L      
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
             A G++ EM +K + PD  TY ++ + L   G ++EA +    M               
Sbjct: 423 VRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM--------------- 467

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                E  PS +SY+  +   C   R  DA+++      KG   N++TY  L+ G+
Sbjct: 468 EMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 214/409 (52%), Gaps = 3/409 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTYN ++ +L  +G L+   +  + + K+   P   TY IL+      G 
Sbjct: 152 MKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGG 211

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM+++D M +    PD++TYN +I G C  G ++ AF++   + S    PDV+TYN 
Sbjct: 212 IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNI 271

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      G+    ++L+ ++   G + N VT++++I   C++GK+++   ++++M++ G
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   Y+ LI A CK G ++ A  ++DVM   G   + +  NTIL  LC +K+ DEA 
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEAL 391

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     + G   +  SY ++ +  +      RAL +  EM ++ + P   TYN++I  L
Sbjct: 392 SIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCL 451

Query: 301 SQSGKTEQAIDML--NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            + G  ++AI++L   E+  S   P   ++N ++ G C   +V  A++    MV+K  +P
Sbjct: 452 CRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRP 511

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           +  T   L+ G+   G L  A +   + ++   A+   ++  L  + CK
Sbjct: 512 NETTYTFLIEGIGFGGCLNDA-RDLATTLVNMDAISEHSFERLYKTFCK 559



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 211/439 (48%), Gaps = 31/439 (7%)

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
           + LP ++   T INR   S    +   L D  D H +K         +   CK G  +++
Sbjct: 27  RTLP-ILNETTNINRTLSSVSKPQTHTL-DFKDTHLLKS--------LSRSCKAGNFNES 76

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
              +R++   G  PD V    LI     +  +++A ++M ++   G   + I  N I+  
Sbjct: 77  LYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITG 135

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C   ++D AY +L+    +G+  D V+Y  LI         + AL+  +++ +    P+
Sbjct: 136 FCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPT 195

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TY  +I      G  ++A+ +L+E+L+  + PD  T+N+II G C EG V++A Q  +
Sbjct: 196 VVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIIS 255

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            +  K + PD++T NILL GL  +G  E   +     + +G   + VTY+ LISS+C++ 
Sbjct: 256 SISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDG 315

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           ++E+  GLL +M++K L PD Y Y  +  AL + GR++ A +   +M+  G +   +V  
Sbjct: 316 KVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCV-PDIVNY 374

Query: 470 NT-------SKTPEE------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           NT        K  +E              P++ SY+   +   S G    AL +  E   
Sbjct: 375 NTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLD 434

Query: 511 KGIAINKSTYMNLMNGLIK 529
           KG+  +  TY +L++ L +
Sbjct: 435 KGVDPDGITYNSLISCLCR 453



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G   ++L F   +V K  KPD+V C  L+ GL     ++KA++        G   D 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHP-DL 126

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF--- 452
           + YN +I+  C+  R++ A+ +L  M+ K   PD  TY  +  +L   G L+ A +F   
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 453 -------TSIMVETGKINHQVVQPNTSKTPEEID--------PSSISYSEKINEHCSQGR 497
                   +++  T  I   ++Q    +  + +D        P   +Y+  I   C +G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              A QI      KG A +  TY  L+ GL+ + K
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGK 281


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/450 (32%), Positives = 232/450 (51%), Gaps = 6/450 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TYN +L AL K  +++  R LL++M  +G +P+  +Y  +VS  C+LG ++EA    +L 
Sbjct: 180 TYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAR---ELS 236

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + KS   V  YN LING+C    +EE F L  EM    + PDV+TY+T+IN   E G  
Sbjct: 237 MRIKSFVPV--YNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNV 294

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  ++ ++   G  PN  T   ++K Y   G++ +A  +   M + G  P+ V YNTL
Sbjct: 295 EMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTL 354

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C  G M EA  +   M R G+  N  T +T++        L  A  + N     G 
Sbjct: 355 IHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGC 414

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + V Y  ++    R+   N AL L + M      P+T T+N  I GL  SGKTE A+ 
Sbjct: 415 LPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMK 474

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +LN++ Q G  P+ TT+N ++ G  +  +  +ALQ   ++ E   K ++VT N +LSG C
Sbjct: 475 VLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFC 534

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG-PDR 430
             G+ + AL+     ++ G   DS+TYNT+I + CK+  ++ A  L+  + +K  G PD 
Sbjct: 535 HAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDV 594

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +TY ++   +     ++EA      M+  G
Sbjct: 595 FTYTSLLWGVCNWIGVDEAVVHLDKMINEG 624



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 253/521 (48%), Gaps = 25/521 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           +TY T++  L  +  ++ ++ LL  MK +G+  N   + I+++ Y + G  ++A++    
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +    P V  YN +++   +    +    +   M+   +  +V TYN L+    ++ R
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A KL+ E+   G  P+AV++  ++   C+ GK+++A ++  +M    F P    YN 
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNA 248

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  C+   MEE F + + M  +G+  + IT +T+++TL     ++ A  +L     RG
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  ++ +L+ GYF   +   AL LW+ M +    P+T  YN +I GL   GK  +A+
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAV 368

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  ++ ++G+ P+ETT++T+I GF   G +  A +  NKM+     P++V    ++  L
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVL 428

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR  +   AL    +        +++T+NT I  LC   + E A  +L++M +    P+ 
Sbjct: 429 CRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNV 488

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----------SKTPEEI-- 478
            TY  +   L  + R  EA +     +E  +I   +V  NT           K   +I  
Sbjct: 489 TTYNEVLDGLFNAKRTREALQIVG-EIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAG 547

Query: 479 -------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
                   P SI+Y+  I  +C QG  K A+Q+ +   +KG
Sbjct: 548 KLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKG 588



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 199/402 (49%), Gaps = 36/402 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +TY+T+++ L + G +     +L+ M  +G  PN  T+  L+ GY   G L EA
Sbjct: 273 GIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEA 332

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M Q  S P+   YN LI+G C+ G + EA  + ++ME   + P+  TY+TLI+ 
Sbjct: 333 LDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G  + A ++ +++  +G  PN V +  M+   C+    + A  ++ NM      P+
Sbjct: 393 FAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+NT I   C +G  E A ++++ M + G   N  T N +L                 
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLD---------------- 496

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                              G F  ++   AL++  E++E +I  +  TYN ++ G   +G
Sbjct: 497 -------------------GLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 537

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTC 363
             + A+ +  +LL  G  PD  T+NT+I+ +C +G+V+ A+Q  +++ +K    PD+ T 
Sbjct: 538 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTY 597

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
             LL G+C    +++A+      I +G   +  T+N L+  L
Sbjct: 598 TSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 210/454 (46%), Gaps = 29/454 (6%)

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRF-FESGRSMEAFK-LIDELDEHGIKPNAVTHNIMI 157
           F+      S K  P  +TY T+I R  +E  R ++  + L+  +   GI  N     I+I
Sbjct: 60  FKSIANSNSFKHTP--LTYTTMIKRLGYE--RDIDGIQYLLQLMKLEGISCNEDLFVIVI 115

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
             Y + G  ++A K    + E G  P    YN ++DA       +    + + M R G++
Sbjct: 116 NAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIE 175

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
           +N  T N +L  LC   ++D A  LL   S +G   D VSY T+++   R  K   A +L
Sbjct: 176 LNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL 235

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
              M+ +  +P    YNA+I G  +  K E+  ++ NE+   G+ PD  T++T+I+    
Sbjct: 236 --SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSE 290

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G VE AL    KM  +   P++ T   L+ G    G L +AL  +   I +G   ++V 
Sbjct: 291 MGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVA 350

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNTLI  LC   ++ +A  +  +ME   + P+  TY+ +     ++G L  A +  + M+
Sbjct: 351 YNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMI 410

Query: 458 ETGKINHQVVQPNT------------------SKTPEEIDPSSISYSEKINEHCSQGRYK 499
             G + + VV                      +       P++I+++  I   C  G+ +
Sbjct: 411 TNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTE 470

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            A+++  + RQ G A N +TY  +++GL   +++
Sbjct: 471 WAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRT 504



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 1/267 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY+T++D   K G L    ++ + M   G +PN   Y  +V   C+   
Sbjct: 374 MERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSM 433

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ +++ M      P+  T+N  I G C +G  E A ++  +M      P+V TYN 
Sbjct: 434 FNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNE 493

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++  F + R+ EA +++ E++E  IK N VT+N ++  +C  G    A +I   +   G
Sbjct: 494 VLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGG 553

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEA 239
             PD +TYNT+I A CK G ++ A +++D + +KG    +  T  ++L  +C    +DEA
Sbjct: 554 TKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEA 613

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYF 266
            + L+     G   +  ++  L+ G F
Sbjct: 614 VVHLDKMINEGICPNRATWNALVRGLF 640



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 1/136 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYNTIL      G       +   +   G  P+  TYN ++  YCK G +K A+++VD 
Sbjct: 524 VTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDR 583

Query: 71  MTQ-NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           +T+  +  PDV+TY  L+ G CN   ++EA     +M +  + P+  T+N L+   F   
Sbjct: 584 LTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKL 643

Query: 130 RSMEAFKLIDELDEHG 145
             +    ++D +  +G
Sbjct: 644 GHLGPIHIVDNILANG 659


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 242/462 (52%), Gaps = 3/462 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T   +++    +  L+    LL  + K G  PN  T+N L++G+C  G + +A
Sbjct: 85  GITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKA 144

Query: 65  MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           M   +DLM +   L D ++Y  LING C  G   +A +L ++ME   + P+++TY+T+I+
Sbjct: 145 MAFRLDLMAKGYPL-DEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVID 203

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +     +A +L   +   GI  + V +N +I   C  G+  +A +++  M     +P
Sbjct: 204 GLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINP 263

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T+N L+DA CK G + EA  +  VM ++G K + +T N ++   C    + EA  L 
Sbjct: 264 DDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELF 323

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N   KRG   D ++Y  LI GY + +  + A+ L+ E++ + ++P+  TYN++I GL + 
Sbjct: 324 NRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKL 383

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+     ++++E+   G  PD  T+N  +  FC     EKA+    ++V+  + PD    
Sbjct: 384 GRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIW-PDFYMY 442

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           ++++   C+   L+ A +  +  ++ G   +  TY  +I++LCK+   ++A  LLS+M++
Sbjct: 443 DVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDD 502

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
               PD  T+  I  AL E    ++A+K    M+E G +N +
Sbjct: 503 NDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 21/400 (5%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P +  ++ L+      G    A  L  +L   GI P+  T  I+I  YC +  +  A  +
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEE--AFRMMDVMGRKGLKMNTITLNTILHTL 230
           +  + + GF P+ VT+NTLI+  C  G + +  AFR +D+M  KG  ++  +  ++++ L
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFR-LDLMA-KGYPLDEFSYGSLINGL 170

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   +  +A  LL    +     + ++Y T+I G  +D     AL+L+  +  R I+   
Sbjct: 171 CKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDV 230

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             YN++I G    G+  +A  +L  +++  + PD+ TFN ++   C EG++ +A      
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M+++  KPDIVT N L+ G C    + +A + F   + +G   D + YN LI+  CK   
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +++A  L  E+  K L P+  TY ++   L + GR+   Q+    M + G+         
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQ--------- 401

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                    P  ++Y+  ++  C    Y+ A+ +F +  Q
Sbjct: 402 --------SPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ 433



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 171/377 (45%), Gaps = 55/377 (14%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P    ++ L+ A  + G+   A  +   +  KG+  +  TL  +++  C +  L  A+ L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L +  K G+                                    P+  T+N +I G   
Sbjct: 113 LGTILKMGF-----------------------------------QPNMVTFNTLINGFCI 137

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G   +A+    +L+  G   DE ++ ++I+G C  GQ   ALQ   KM E   +P+++T
Sbjct: 138 NGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLIT 197

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + ++ GLC++ ++  AL+ F     +G  VD V YN+LI   C   +  +A  LL+ M 
Sbjct: 198 YSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMV 257

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV----------VQPNTS 472
              + PD YT+  +  AL + GR+ EAQ   ++M++ G+    V          +  N S
Sbjct: 258 RGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVS 317

Query: 473 KTPE--------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           +  E         ++P  ++Y+  IN +C      +A+ +F+E R K +  N +TY +L+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLI 377

Query: 525 NGLIK--RRKSISKAVD 539
           +GL K  R   + + VD
Sbjct: 378 DGLCKLGRMSCVQELVD 394



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 20/269 (7%)

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           ++ M  +   P  F ++ ++  + + G    AI + ++L   G+ P   T   +I+ +C 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           +  +  A      +++  F+P++VT N L++G C  G++ KA+ F    + KG  +D  +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y +LI+ LCK  +  DA  LL +MEE  + P+  TY+ +   L +   + +A +  S++ 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 458 ETGKINHQVVQPN-------------------TSKTPEEIDPSSISYSEKINEHCSQGRY 498
             G I   VV  N                   T      I+P   +++  ++  C +GR 
Sbjct: 223 SRG-ILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRI 281

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +A  +F    ++G   +  TY  LM G 
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGF 310


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 241/456 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D VT N +++     G++     +L+ + K+G  P+  T   L+ G C  G +K+A
Sbjct: 99  GITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKA 158

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++  D +   +   D  +Y  LING C  G  + A +L + +E   + PDVV YN +I+ 
Sbjct: 159 LKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDS 218

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++    EA  L  E++   I PN VT+  +I  +C  G + +A  ++  M+    +PD
Sbjct: 219 LCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPD 278

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T++ LIDA  K G M+ A  ++ VM +  +K + +T N+++       ++  A  + N
Sbjct: 279 VYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFN 338

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S ++ G      SY  +I G  + +  + A+ L++EMK + ++P+T T+N++I GL +SG
Sbjct: 339 SMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSG 398

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +     D+++++     + D  T++++I   C    +++A+    KM+ +  +PD+ T  
Sbjct: 399 RIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYT 458

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ GLC+ G L+ A + F+  ++KG  +D  TY  +IS  CK    ++A  LLS+ME+ 
Sbjct: 459 ILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDN 518

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
              P+  T+  I  AL E    ++A+K    M+  G
Sbjct: 519 GCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 231/467 (49%), Gaps = 17/467 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ + + M   +  P  + +N +++          A  L K ++   +  D+VT N LI
Sbjct: 52  DAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILI 111

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N F   G+   +F ++  + + G  P+ +T   +IK  C  G++ KA K   ++    F 
Sbjct: 112 NCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQ 171

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            D ++Y TLI+  CK G  + A ++M  +  + +K + +  N I+ +LC  K + EA  L
Sbjct: 172 LDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNL 231

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +  + +  Y + V+Y TLI G+        A+ L +EMK + I P  +T++ +I  L +
Sbjct: 232 YSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGK 291

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK + A  +L  ++++ + PD  T+N+++ G+    +V+ A    N M +    P + +
Sbjct: 292 EGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQS 351

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             I++ GLC+  ++++A+  F     K    +++T+N+LI  LCK  R+   + L+ +M 
Sbjct: 352 YTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMR 411

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++    D  TY+++  AL ++  L++A      M+                  +EI P  
Sbjct: 412 DRSQLADVITYSSLIDALCKNCHLDQAIALFKKMIT-----------------QEIQPDM 454

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +Y+  I+  C  GR K A ++F+    KG  ++  TY  +++G  K
Sbjct: 455 YTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCK 501



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 35/350 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V YN I+D+L K   + E  +L S+M  + + PN  TY  L+ G+C +G L EA+ +
Sbjct: 207 PDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVAL 266

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF- 126
           ++ M      PDV+T+++LI+     G ++ A  +   M    + PDVVTYN+L++ +F 
Sbjct: 267 LNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFL 326

Query: 127 ---------------ESGRSM-------------------EAFKLIDELDEHGIKPNAVT 152
                          +SG +                    EA  L +E+    + PN +T
Sbjct: 327 VNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTIT 386

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            N +I   CK G+I     +V  M +     D +TY++LIDA CK  ++++A  +   M 
Sbjct: 387 FNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMI 446

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            + ++ +  T   ++  LC   +L  A  +      +GY+LD  +Y  +I+G+ +    +
Sbjct: 447 TQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFD 506

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            AL L  +M++   +P+  T++ +I  L +  + ++A  +L E++  G++
Sbjct: 507 EALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 113/216 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P   +Y  ++D L K   ++E   L  +MK + ++PN  T+N L+ G CK G 
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +     +VD M     L DV TY+ LI+  C    L++A  L K+M + ++ PD+ TY  
Sbjct: 400 IAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTI 459

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR   A ++   L   G   +  T+ +MI  +CK G  D+A  ++  ME+NG
Sbjct: 460 LIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNG 519

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             P+ +T++ +I A  +    ++A +++  M  +GL
Sbjct: 520 CIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 152/349 (43%), Gaps = 52/349 (14%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P    +N ++ +  K      A  +   +  KG+  + +TLN +++  C   ++  ++ +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L +  KRGY+                                   P   T   +I GL  
Sbjct: 127 LATILKRGYH-----------------------------------PDVITLTTLIKGLCL 151

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ ++A+   ++++      D  ++ T+I+G C  G+ + A+Q    + E+S KPD+V 
Sbjct: 152 RGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVM 211

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            NI++  LC+  ++ +A   +     K    + VTY TLI   C    L +A  LL+EM+
Sbjct: 212 YNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMK 271

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            K + PD YT++ +  AL + G+++ A+   ++M++                   + P  
Sbjct: 272 LKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKA-----------------YVKPDV 314

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           ++Y+  ++ +      K A  +F    Q G+     +Y  +++GL K +
Sbjct: 315 VTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTK 363



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 17/261 (6%)

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           N A+ L++ M   +  P TF +N ++  L +  +   AI +   L   G+  D  T N +
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+ FC  GQ+  +      ++++ + PD++T   L+ GLC  G ++KALKF    +    
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            +D ++Y TLI+ LCK    + A  L+  +EE+ + PD   Y  I  +L ++  + EA  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             S M                   ++I P+ ++Y+  I   C  G   +A+ +  E + K
Sbjct: 231 LYSEM-----------------NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLK 273

Query: 512 GIAINKSTYMNLMNGLIKRRK 532
            I  +  T+  L++ L K  K
Sbjct: 274 NINPDVYTFSILIDALGKEGK 294


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 259/591 (43%), Gaps = 89/591 (15%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P   T+ +++ A  K+G + E   L  +M   G+  N      LV GYCK   
Sbjct: 305 MRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDK 364

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+   D M +N   P+  TY +LI   C  G + +A+ L  +M++  + P V   N+
Sbjct: 365 LVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNS 424

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +     EA KL DE     I  N  T+N ++ W CKEGK+ +A  + + M + G
Sbjct: 425 LIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG 483

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  V+YN++I  +C+ GN++ A  +   M   GLK N IT                  
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVIT------------------ 525

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                            Y  L+ GYF++     A  ++D M +  I+PS FTYN  I GL
Sbjct: 526 -----------------YSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGL 568

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+T +A DML + ++ G +P   T+N+I+ GF  EG V  AL  + +M E    P++
Sbjct: 569 CKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNV 628

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   L++G C+    + ALK       KG  +D   Y  LI   CK++ +E A  L SE
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSE 688

Query: 421 MEEKKLGP-----------------------------------DRYTYAAIHTALVESGR 445
           + +  L P                                   D  TY  +   L++ GR
Sbjct: 689 LLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGR 748

Query: 446 LEEAQKFTSIMVETGKINHQVVQP-------------NTSKTPEEIDPSSIS-----YSE 487
           L  A    S M   G I   ++               N  K   E++  SI+     Y+ 
Sbjct: 749 LVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNA 808

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            I  H   G  ++A ++  E   KG+  N +TY  L+NG IK   S  K++
Sbjct: 809 LIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSL 859



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 191/393 (48%), Gaps = 3/393 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  V+YN+++    ++G L+    + SDM   GL PN  TY+IL+ GY K G  + A
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYA 542

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M     +P  +TYN+ ING C  G   EA  + K+      +P  +TYN++++ 
Sbjct: 543 FYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDG 602

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G    A     E+ E G+ PN +T+  +I  +CK    D A K+   M   G   D
Sbjct: 603 FIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELD 662

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  LID  CK  ++E A  +   +   GL  N++  N+++        ++ A  L  
Sbjct: 663 IAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQK 722

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D  +Y TLI G  ++ +   AL L+ EM  + I+P    Y  +I GL   G
Sbjct: 723 RMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKG 782

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A  +L E+ +  + P+   +N +I G    G +++A + HN+M++K   P+  T +
Sbjct: 783 QLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYD 842

Query: 365 ILLSGLCREGILEKALKFFRSWILK-GKAVDSV 396
           IL++G  + G    ALK   S   K GK +  +
Sbjct: 843 ILINGKIKGG--NSALKSLLSLKFKDGKGMKRI 873



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 236/518 (45%), Gaps = 51/518 (9%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           YN L++ Y K   L +A+   + + ++  +P +   N L+       M+ EA  + ++M 
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
              +  D  T + ++    +     EA K   E    G+K +A  ++I+I+ +CK   ++
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
            AC ++++M + G+ P   T+ ++I A  K GNM EA R+ D M   G++MN +   T++
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
              C + KL  A    +  ++ G   + V+Y  LI    ++    +A  L+ +MK + I 
Sbjct: 357 KGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNIC 416

Query: 288 PST----------------------------------FTYNAMIWGLSQSGKTEQAIDML 313
           P+                                   FTYN+++  L + GK  +A  + 
Sbjct: 417 PTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLW 476

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            ++L  G+ P + ++N++I G C +G ++ A    + M++   KP+++T +IL+ G  + 
Sbjct: 477 QKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G  E A   F   + +       TYN  I+ LCK  R  +A  +L +  EK   P   TY
Sbjct: 537 GDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTY 596

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
            +I    ++ G +  A      M E+G                 + P+ I+Y+  IN  C
Sbjct: 597 NSIMDGFIKEGSVSSALTAYREMCESG-----------------VSPNVITYTTLINGFC 639

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                  AL++  E R KG+ ++ + Y  L++G  K++
Sbjct: 640 KNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQ 677


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 269/570 (47%), Gaps = 51/570 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P   T+ +++ A  K+G + E   L  DM   G   N      L+ GYC  G 
Sbjct: 101 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN 160

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL--------- 111
           L+ A+ +V+ ++++  +P+  TY++LI+G C  G +E+AF    EM++  +         
Sbjct: 161 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 220

Query: 112 -------------------------LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
                                    L +V T+NTL++   + G+  EA  L DE+   GI
Sbjct: 221 ILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            PN V++N +I  +C++  I+ ACK+ + M +NGF+P+ VT+  L+D   K G++E AF 
Sbjct: 281 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 340

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +   M    +     TL  I+  LC   +  E   L N    +G+    + Y T+I G+ 
Sbjct: 341 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 400

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++   N A  ++ EM E  I PST TY ++I G  +    + A+ +LN++ + G+  D  
Sbjct: 401 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 460

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            + T+I GFC    ++ A +  N++      P+    N +++G      +E+A+  ++  
Sbjct: 461 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + +G   D  TY +LI  L K  RL  A  + +EM  K + PD   +  +   L   G+ 
Sbjct: 521 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 580

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           E A+K    M   GK                + PS + Y+  I  H  +G  ++A ++ +
Sbjct: 581 ENARKILEDM--NGK---------------NMIPSVLIYNTLIAGHFKEGNLQEAFRLHD 623

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
           E   +G+  +  TY  L+NG  K   + S+
Sbjct: 624 EMLDRGLVPDNITYDILVNGKFKGDGNFSR 653



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 256/540 (47%), Gaps = 21/540 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y+  +  L  K        LL +M+  G +P   T+  +++   K G + EA+R+ 
Sbjct: 74  DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLK 133

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M       ++     L+ G+C  G L  A  L  E+    L+P+ VTY+ LI+   ++
Sbjct: 134 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKN 193

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +AF+   E+   GI+ +  + N +++ Y K      A  +  +  E+G + +  T+
Sbjct: 194 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTF 252

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTL+   CK G M EA  + D +  KG+  N ++ N I+   C +  ++ A  +      
Sbjct: 253 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 312

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G+  + V++  L+ GYF+      A  ++  MK+  I+P+  T   +I GL ++G++ +
Sbjct: 313 NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE 372

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
             D+ N+ +  G +P    +NTII GF  EG +  A   + +M E    P  VT   L+ 
Sbjct: 373 GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLID 432

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G C+   ++ ALK       KG  +D   Y TLI   CK R ++ A  LL+E+    L P
Sbjct: 433 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 492

Query: 429 DRYTYAAIHTALVESGRLEEA----------------QKFTSI---MVETGKINHQVVQP 469
           +R+ Y ++ T       +EEA                + +TS+   ++++G++ +     
Sbjct: 493 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY-ASDI 551

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +T    + I P   +++  IN  C++G++++A +I E+   K +  +   Y  L+ G  K
Sbjct: 552 HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 611



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 225/475 (47%), Gaps = 25/475 (5%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P +   N+L+       M  EA  L  +M  + +  D  T + ++    + G  +EA + 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
             +    G++ +   ++I +   C +     A  ++R M   G+ P   T+ ++I A  K
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            GN+ EA R+ D M   G  MN     +++   C +  L  A +L+N  S+ G   ++V+
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI G  ++    +A + + EMK + I  S ++ N+++ G  +    + A  M N+ L
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           +SG+  +  TFNT++   C EG++ +A    ++++ K   P++V+ N ++ G CR+  + 
Sbjct: 243 ESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A K ++  +  G   ++VT+  L+    K+  +E+AF +   M++  + P   T   I 
Sbjct: 302 AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 361

Query: 438 TALVESGRLEEAQ----KFTSI---------------MVETGKINHQVVQPNTSKTPEE- 477
             L ++GR  E +    KF S                 ++ G IN   +  N  +   E 
Sbjct: 362 KGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN---LASNVYREMCEV 418

Query: 478 -IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            I PS+++Y+  I+  C       AL++  + ++KG+ ++   Y  L++G  KRR
Sbjct: 419 GITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 473



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 154/349 (44%), Gaps = 18/349 (5%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P     N L+ A  +     EA  + + M   G+  +  TL+ +L     E  + EA  
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
               A  RG  LD+ +Y   +        +  AL L  EM+    +P   T+ ++I    
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G   +A+ + ++++  G   +     +++ G+C +G +  AL   N++ E    P+ V
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T ++L+ G C+ G +EKA +F+     KG      + N+++    K +  ++AF + ++ 
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E  L  + +T+  + + L + G++ EA      ++  G                 I P+
Sbjct: 242 LESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-----------------ISPN 283

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +SY+  I  HC +     A ++++E    G   N  T+  LM+G  K+
Sbjct: 284 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKK 332


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 229/420 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V +N +L A+ K  K + V  L   M+  G+  +  T+NI+++ +C    +  A+ 
Sbjct: 82  FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    PD  T   L+NG+C    + +A  L  +M  +   PD+V YN +I+   
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++ R  +AF    E++  GI+PN VT+  ++   C   +   A +++ +M +   +P+ +
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY+ L+DA  K G + EA  + + M R  +  + +T +++++ LC   ++DEA  + +  
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G   D VSY TLI G+ + ++    +KL+ EM +R ++ +T TYN +I G  Q+G  
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A +  +++   G+ PD  T+N ++ G C  G++EKAL     M ++    DIVT   +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E+A   F S  LKG   D VTY T++S LC +  L +   L ++M+++ L
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/439 (31%), Positives = 224/439 (51%), Gaps = 6/439 (1%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DVW 81
           KLN+  DL SDM K    P+   +N L+S   KL   K+   V+ L  + + L    D++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL---KKYDVVISLGKKMEVLGIRNDLY 121

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N++IN +C    +  A  +  +M  L   PD VT  +L+N F    R  +A  L+D++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            E G KP+ V +N +I   CK  +++ A    + +E  G  P+ VTY  L++  C +   
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            +A R++  M +K +  N IT + +L       K+ EA  L     +     D V+Y +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           + G    ++ + A +++D M  +  +    +YN +I G  ++ + E  + +  E+ Q G+
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           + +  T+NT+I GF   G V+KA +F ++M      PDI T NILL GLC  G LEKAL 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F     +   +D VTY T+I  +CK  ++E+A+ L   +  K L PD  TY  + + L 
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 442 ESGRLEEAQKFTSIMVETG 460
             G L E +   + M + G
Sbjct: 482 TKGLLHEVEALYTKMKQEG 500



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 208/379 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T+N +++      +++    +L  M K G  P+R T   LV+G+C+   
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +VD M +    PD+  YN +I+  C    + +AF   KE+E   + P+VVTY  
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N    S R  +A +L+ ++ +  I PN +T++ ++  + K GK+ +A ++   M    
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY++L++  C    ++EA +M D+M  KG   + ++ NT+++  C  K++++  
Sbjct: 291 IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G+F+    ++A + + +M    I P  +TYN ++ GL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G+ E+A+ +  ++ +  M  D  T+ T+I G C  G+VE+A      +  K  KPDI
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470

Query: 361 VTCNILLSGLCREGILEKA 379
           VT   ++SGLC +G+L + 
Sbjct: 471 VTYTTMMSGLCTKGLLHEV 489



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 229/459 (49%), Gaps = 17/459 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M +++  P +  +N L++        +    L K+ME L +  D+ T+N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F    +   A  ++ ++ + G +P+ VT   ++  +C+  ++  A  +V  M E G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD V YN +ID+ CK   + +AF     + RKG++ N +T   +++ LC   +  +A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   K+    + ++Y  L+  + ++ K   A +L++EM    I P   TY++++ GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               + ++A  M + ++  G + D  ++NT+I+GFC   +VE  ++   +M ++    + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L+ G  + G ++KA +FF      G + D  TYN L+  LC    LE A  +  +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+++++  D  TY  +   + ++G++EEA      +   G                 + P
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-----------------LKP 468

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
             ++Y+  ++  C++G   +   ++ + +Q+G+  N  T
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 220/432 (50%), Gaps = 17/432 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L +A  L  +M   +  P +V +N L++   +  +      L  +++  GI+ +  T NI
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C   ++  A  I+  M + G+ PD VT  +L++  C+   + +A  ++D M   G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            K + +  N I+ +LC  K++++A+       ++G   + V+Y  L+ G     + + A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  +M +++I P+  TY+A++    ++GK  +A ++  E+++  + PD  T++++++G 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   ++++A Q  + MV K    D+V+ N L++G C+   +E  +K FR    +G   ++
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYNTLI    +   ++ A    S+M+   + PD +TY  +   L ++G LE+A      
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL----- 420

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                     V+  +  K   E+D   ++Y+  I   C  G+ ++A  +F     KG+  
Sbjct: 421 ----------VIFEDMQK--REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

Query: 516 NKSTYMNLMNGL 527
           +  TY  +M+GL
Sbjct: 469 DIVTYTTMMSGL 480



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/389 (23%), Positives = 180/389 (46%), Gaps = 18/389 (4%)

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           ++ K++ A  +  +M ++   P  V +N L+ A  K    +    +   M   G++ +  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +++  CC  ++  A  +L    K GY  D V+ G+L+ G+ R  + + A+ L D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            E    P    YNA+I  L ++ +   A D   E+ + G+ P+  T+  +++G C+  + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             A +  + M++K   P+++T + LL    + G + +A + F   +      D VTY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           ++ LC   R+++A  +   M  K    D  +Y  +     ++ R+E+  K    M + G 
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 462 INHQVV---------QPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQ 503
           +++ V          Q       +E         I P   +Y+  +   C  G  + AL 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           IFE+ +++ + ++  TY  ++ G+ K  K
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGK 450


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 258/530 (48%), Gaps = 26/530 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  +YN ++D   K+G++++  DL   M++QG++PN  TY+ L++G CK   + +A
Sbjct: 148 GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKA 207

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV+  M      P+  TYN LI+G+  +GM +E+ R+ KEM S  L+PDV   N+ +  
Sbjct: 208 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 267

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  EA  + D +   G KP+ +++  ++  Y   G I     +   M   G  PD
Sbjct: 268 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 327

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              +NTLI+A  + G M+++  M + M ++G+  + IT +T++   C   +LD+A    N
Sbjct: 328 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT-YNAMIWGLSQS 303
                G   D   Y  LI G        +A +L  +M  + I P     + ++I  L + 
Sbjct: 388 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 447

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +  D+++ ++ +G  P+  TFN+++ G+C  G +++A+   + M     +PDI T 
Sbjct: 448 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 507

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ G C+ G ++ AL  FR  + K   + SV+YN ++  L + RR   A  +  EM E
Sbjct: 508 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 567

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTPEEID 479
             +    +TYA +   L  +   +EA    +K  S+ V+   +   +V            
Sbjct: 568 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIV------------ 615

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                    I      GR ++A ++F      G+     TY  ++  LIK
Sbjct: 616 ---------IRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIK 656



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 254/502 (50%), Gaps = 18/502 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD    N+ + AL K G++ E RD+   M  +G  P+  +Y  L+ GY   G +     
Sbjct: 255 VPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDN 314

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + ++M     +PD   +N LIN +   GM++++  + ++M    + PD++T++T+I+ F 
Sbjct: 315 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 374

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A +  + + + G+ P+   ++ +I+  C    + KA +++ +M   G  P C+
Sbjct: 375 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 434

Query: 187 TYNTLIDAN-CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            + T I  N CK G + E   ++D++   G + N IT N+++   C    + EA  LL+S
Sbjct: 435 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 494

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G   D  +Y TL+ GY +  + + AL L+ +M  +++  ++ +YN ++ GL Q+ +
Sbjct: 495 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           T  A +M +E+++SGM     T+ T++ G C     ++A     K+   + K DI+T NI
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 614

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++  + + G  ++A + F +    G     +TY  +I++L KE   EDA  L S ME+  
Sbjct: 615 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 674

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD      I   L+  G + +A  + S      KI+ + + P  + T      S + Y
Sbjct: 675 CTPDSRILNEIIRMLLNKGEVAKAGNYLS------KIDKKGILPEATTT------SLLIY 722

Query: 486 SEKINEHCSQGRYKDALQIFEE 507
              +N     G+Y++ +++  E
Sbjct: 723 LFSVN-----GKYREYIKLLPE 739



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 227/473 (47%), Gaps = 18/473 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           E  + +D     ++ P ++TYN+LIN +  A   +    +   +    L PDV +YN LI
Sbjct: 101 ELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALI 160

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F + G   +A  L  +++E GI PN VT++ +I   CK  ++DKA +++R M   G  
Sbjct: 161 DGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVR 220

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ +TYN LI     +G  +E+ R+   M    L  +    N+ +  LC   ++ EA  +
Sbjct: 221 PNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDI 280

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +S   +G   D +SYG L+ GY           L++ M    ++P    +N +I   ++
Sbjct: 281 FDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYAR 340

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G  ++++ M  ++ + G+ PD  TF+T+I  FC  G+++ A++  N M++    PD   
Sbjct: 341 LGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAV 400

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT-LISSLCKERRLEDAFGLLSEM 421
            + L+ G C    L KA +     + KG     + + T +I++LCKE R+ +   ++  +
Sbjct: 401 YSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLI 460

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
                 P+  T+ ++       G ++EA      M   G                 ++P 
Sbjct: 461 IHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG-----------------VEPD 503

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             +Y+  ++ +C  GR  DAL +F +   K + +   +Y  +++GL + R++I
Sbjct: 504 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 556



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 115/243 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  TYNT++D   K G++++   L  DM  + +     +YNI++ G  +   
Sbjct: 495 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   M ++     + TY  ++ G C     +EA  L +++ S+ +  D++T+N 
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 614

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I   F+ GR  EA +L   +  +G+ P  +T+ +MI    KE   + A  +  +ME++ 
Sbjct: 615 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 674

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD    N +I      G + +A   +  + +KG+     T + +++      K  E  
Sbjct: 675 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 734

Query: 241 MLL 243
            LL
Sbjct: 735 KLL 737


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 258/530 (48%), Gaps = 26/530 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  +YN ++D   K+G++++  DL   M++QG++PN  TY+ L++G CK   + +A
Sbjct: 219 GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKA 278

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV+  M      P+  TYN LI+G+  +GM +E+ R+ KEM S  L+PDV   N+ +  
Sbjct: 279 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 338

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  EA  + D +   G KP+ +++  ++  Y   G I     +   M   G  PD
Sbjct: 339 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 398

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              +NTLI+A  + G M+++  M + M ++G+  + IT +T++   C   +LD+A    N
Sbjct: 399 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT-YNAMIWGLSQS 303
                G   D   Y  LI G        +A +L  +M  + I P     + ++I  L + 
Sbjct: 459 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 518

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +  D+++ ++ +G  P+  TFN+++ G+C  G +++A+   + M     +PDI T 
Sbjct: 519 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 578

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ G C+ G ++ AL  FR  + K   + SV+YN ++  L + RR   A  +  EM E
Sbjct: 579 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 638

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTPEEID 479
             +    +TYA +   L  +   +EA    +K  S+ V+   +   +V            
Sbjct: 639 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIV------------ 686

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                    I      GR ++A ++F      G+     TY  ++  LIK
Sbjct: 687 ---------IRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIK 727



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 254/502 (50%), Gaps = 18/502 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD    N+ + AL K G++ E RD+   M  +G  P+  +Y  L+ GY   G +     
Sbjct: 326 VPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDN 385

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + ++M     +PD   +N LIN +   GM++++  + ++M    + PD++T++T+I+ F 
Sbjct: 386 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 445

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  +A +  + + + G+ P+   ++ +I+  C    + KA +++ +M   G  P C+
Sbjct: 446 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 505

Query: 187 TYNTLIDAN-CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            + T I  N CK G + E   ++D++   G + N IT N+++   C    + EA  LL+S
Sbjct: 506 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 565

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
               G   D  +Y TL+ GY +  + + AL L+ +M  +++  ++ +YN ++ GL Q+ +
Sbjct: 566 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           T  A +M +E+++SGM     T+ T++ G C     ++A     K+   + K DI+T NI
Sbjct: 626 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 685

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++  + + G  ++A + F +    G     +TY  +I++L KE   EDA  L S ME+  
Sbjct: 686 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 745

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD      I   L+  G + +A  + S      KI+ + + P  + T      S + Y
Sbjct: 746 CTPDSRILNEIIRMLLNKGEVAKAGNYLS------KIDKKGILPEATTT------SLLIY 793

Query: 486 SEKINEHCSQGRYKDALQIFEE 507
              +N     G+Y++ +++  E
Sbjct: 794 LFSVN-----GKYREYIKLLPE 810



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 227/473 (47%), Gaps = 18/473 (3%)

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           E  + +D     ++ P ++TYN+LIN +  A   +    +   +    L PDV +YN LI
Sbjct: 172 ELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALI 231

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F + G   +A  L  +++E GI PN VT++ +I   CK  ++DKA +++R M   G  
Sbjct: 232 DGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVR 291

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ +TYN LI     +G  +E+ R+   M    L  +    N+ +  LC   ++ EA  +
Sbjct: 292 PNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDI 351

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +S   +G   D +SYG L+ GY           L++ M    ++P    +N +I   ++
Sbjct: 352 FDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYAR 411

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G  ++++ M  ++ + G+ PD  TF+T+I  FC  G+++ A++  N M++    PD   
Sbjct: 412 LGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAV 471

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT-LISSLCKERRLEDAFGLLSEM 421
            + L+ G C    L KA +     + KG     + + T +I++LCKE R+ +   ++  +
Sbjct: 472 YSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLI 531

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
                 P+  T+ ++       G ++EA      M   G                 ++P 
Sbjct: 532 IHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG-----------------VEPD 574

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             +Y+  ++ +C  GR  DAL +F +   K + +   +Y  +++GL + R++I
Sbjct: 575 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 627



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 115/243 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  TYNT++D   K G++++   L  DM  + +     +YNI++ G  +   
Sbjct: 566 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   M ++     + TY  ++ G C     +EA  L +++ S+ +  D++T+N 
Sbjct: 626 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 685

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I   F+ GR  EA +L   +  +G+ P  +T+ +MI    KE   + A  +  +ME++ 
Sbjct: 686 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 745

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD    N +I      G + +A   +  + +KG+     T + +++      K  E  
Sbjct: 746 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 805

Query: 241 MLL 243
            LL
Sbjct: 806 KLL 808


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 253/526 (48%), Gaps = 21/526 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK----QGLVPNRTTYNILVSGYCKLGWL 61
           CLP  V  N++L+ L K GK++    L   M +     G V +  T +I+V G C LG +
Sbjct: 158 CLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKI 217

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +E  R+V        +P V  YNM+I+G+C  G L+ A R  KE++   +LP V TY  L
Sbjct: 218 EEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGAL 277

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN F ++G      +L+ E+   G+  N    N +I    K G + KA + +R M E G 
Sbjct: 278 INGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGC 337

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD  TYNT+I+ +CK G ++EA   ++    +GL  N  +   ++H  C +    +A  
Sbjct: 338 GPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAG 397

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L   ++ G   D VSYG  I G     + + AL + ++M E+ + P    YN ++ GL 
Sbjct: 398 MLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLC 457

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G+      +L+E+L   + PD   F T++ GF   G++++A++    ++ K   P IV
Sbjct: 458 KNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIV 517

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++ G C+ G +  AL           A D  TY+T+I    K+  +  A  +  +M
Sbjct: 518 GYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 577

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            + K  P+  TY ++     +   +  A+K     V  G  +  +V            P+
Sbjct: 578 MKHKFKPNVITYTSLINGFCKKADMIRAEK-----VFRGMKSFDLV------------PN 620

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++Y+  +      G+ + A  IFE     G   N +T+  L+NGL
Sbjct: 621 VVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL 666



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 262/564 (46%), Gaps = 32/564 (5%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G G + DN T + ++  L   GK+ E R L+ D   +G VP+   YN+++ GYCK G L
Sbjct: 193 DGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDL 252

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + A R +  +     LP V TY  LING+C AG  E   +L  EM +  L  +V  +N +
Sbjct: 253 QCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNV 312

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+  F+ G   +A + +  + E G  P+  T+N MI + CK G+I +A + +   +E G 
Sbjct: 313 IDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGL 372

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+  +Y  L+ A CK G+  +A  M+  +   G K + ++    +H +    ++D A M
Sbjct: 373 LPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALM 432

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +     ++G + D   Y  L++G  ++ +      L  EM +R + P  + +  ++ G  
Sbjct: 433 VREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFI 492

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G+ ++AI +   +++ G+ P    +N +I GFC  G++  AL   NKM      PD  
Sbjct: 493 RNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEY 552

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T + ++ G  ++  +  ALK F   +      + +TY +LI+  CK+  +  A  +   M
Sbjct: 553 TYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGM 612

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-----KINHQVVQ--PNTSKT 474
           +   L P+  TY  +     ++G+ E+A     +M+  G        H ++    NT+ +
Sbjct: 613 KSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATS 672

Query: 475 P-------------------------EEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           P                         E  D    +Y+  I   C  G    A  +  +  
Sbjct: 673 PVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKML 732

Query: 510 QKGIAINKSTYMNLMNGLIKRRKS 533
            KG  I+   +  +++GL  + KS
Sbjct: 733 TKGFLIDSVCFTAMLHGLCHKGKS 756



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 250/569 (43%), Gaps = 57/569 (10%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           F C  D V ++++L  L       E+  +L +MK Q L P R  ++ L+  Y + G L  
Sbjct: 85  FSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDR 144

Query: 64  AMRV-----------------------------VDLMTQ-----------NKSLPDVWTY 83
           A+++                             VD+  Q             ++ D +T 
Sbjct: 145 ALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTT 204

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           ++++ G CN G +EE  RL K+      +P VV YN +I+ + + G    A + + EL  
Sbjct: 205 SIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKM 264

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ P   T+  +I  +CK G+ +   +++  M   G + +   +N +IDA  K G + +
Sbjct: 265 KGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTK 324

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A   M  M   G   +  T NT+++  C   ++ EA   L  A +RG   ++ SY  L+ 
Sbjct: 325 AAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMH 384

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
            Y +     +A  +   + E    P   +Y A I G+   G+ + A+ +  ++++ G+ P
Sbjct: 385 AYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFP 444

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D   +N ++ G C  G+        ++M++++ +PD+     L+ G  R G L++A+K F
Sbjct: 445 DAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIF 504

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +  I KG     V YN +I   CK  ++ DA   L++M+     PD YTY+ +    V+ 
Sbjct: 505 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQ 564

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
             +  A K    M++                  +  P+ I+Y+  IN  C +     A +
Sbjct: 565 HDMSSALKMFGQMMK-----------------HKFKPNVITYTSLINGFCKKADMIRAEK 607

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +F   +   +  N  TY  L+ G  K  K
Sbjct: 608 VFRGMKSFDLVPNVVTYTTLVGGFFKAGK 636



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 229/485 (47%), Gaps = 32/485 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TYNT+++   K G++ E  + L   K++GL+PN+ +Y  L+  YCK G 
Sbjct: 332 MAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGD 391

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  ++  + +    PD+ +Y   I+G    G ++ A  +R++M    + PD   YN 
Sbjct: 392 YVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNV 451

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++GR      L+ E+ +  ++P+      ++  + + G++D+A KI + +   G
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKG 511

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V YN +I   CK G M +A   ++ M       +  T +T++     +  +  A 
Sbjct: 512 VDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSAL 571

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     K  +  + ++Y +LI G+ +     RA K++  MK   ++P+  TY  ++ G 
Sbjct: 572 KMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGF 631

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS--------------EGQVEKALQ 346
            ++GK E+A  +   +L +G  P++ TF+ +I+G  +              E +    L 
Sbjct: 632 FKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILD 691

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
           F   M+ + +   I   N ++  LC+ G+++ A       + KG  +DSV +  ++  LC
Sbjct: 692 FFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLC 751

Query: 407 KERRLEDAFGLLS------EME---EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
            + + ++   ++S      E++   +  L  D+Y Y          GRL EA      ++
Sbjct: 752 HKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLY---------QGRLSEASVILQTLI 802

Query: 458 ETGKI 462
           E  ++
Sbjct: 803 EEDRV 807


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 269/570 (47%), Gaps = 51/570 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P   T+ +++ A  K+G + E   L  DM   G   N      L+ GYC  G 
Sbjct: 219 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN 278

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL--------- 111
           L+ A+ +V+ ++++  +P+  TY++LI+G C  G +E+AF    EM++  +         
Sbjct: 279 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 338

Query: 112 -------------------------LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
                                    L +V T+NTL++   + G+  EA  L DE+   GI
Sbjct: 339 ILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 398

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            PN V++N +I  +C++  I+ ACK+ + M +NGF+P+ VT+  L+D   K G++E AF 
Sbjct: 399 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 458

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +   M    +     TL  I+  LC   +  E   L N    +G+    + Y T+I G+ 
Sbjct: 459 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 518

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++   N A  ++ EM E  I PST TY ++I G  +    + A+ +LN++ + G+  D  
Sbjct: 519 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 578

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            + T+I GFC    ++ A +  N++      P+    N +++G      +E+A+  ++  
Sbjct: 579 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + +G   D  TY +LI  L K  RL  A  + +EM  K + PD   +  +   L   G+ 
Sbjct: 639 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 698

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           E A+K    M   GK                + PS + Y+  I  H  +G  ++A ++ +
Sbjct: 699 ENARKILEDM--NGK---------------NMIPSVLIYNTLIAGHFKEGNLQEAFRLHD 741

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
           E   +G+  +  TY  L+NG  K   + S+
Sbjct: 742 EMLDRGLVPDNITYDILVNGKFKGDGNFSR 771



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 256/540 (47%), Gaps = 21/540 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y+  +  L  K        LL +M+  G +P   T+  +++   K G + EA+R+ 
Sbjct: 192 DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLK 251

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M       ++     L+ G+C  G L  A  L  E+    L+P+ VTY+ LI+   ++
Sbjct: 252 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKN 311

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +AF+   E+   GI+ +  + N +++ Y K      A  +  +  E+G + +  T+
Sbjct: 312 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTF 370

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTL+   CK G M EA  + D +  KG+  N ++ N I+   C +  ++ A  +      
Sbjct: 371 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 430

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G+  + V++  L+ GYF+      A  ++  MK+  I+P+  T   +I GL ++G++ +
Sbjct: 431 NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE 490

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
             D+ N+ +  G +P    +NTII GF  EG +  A   + +M E    P  VT   L+ 
Sbjct: 491 GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLID 550

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G C+   ++ ALK       KG  +D   Y TLI   CK R ++ A  LL+E+    L P
Sbjct: 551 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 610

Query: 429 DRYTYAAIHTALVESGRLEEA----------------QKFTSI---MVETGKINHQVVQP 469
           +R+ Y ++ T       +EEA                + +TS+   ++++G++ +     
Sbjct: 611 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY-ASDI 669

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +T    + I P   +++  IN  C++G++++A +I E+   K +  +   Y  L+ G  K
Sbjct: 670 HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 729



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 206/426 (48%), Gaps = 25/426 (5%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G  +EA +   +    G++ +   ++I +   C +     A  ++R M   G+ P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+ ++I A  K GN+ EA R+ D M   G  MN     +++   C +  L  A +L+N  
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           S+ G   ++V+Y  LI G  ++    +A + + EMK + I  S ++ N+++ G  +    
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A  M N+ L+SG+  +  TFNT++   C EG++ +A    ++++ K   P++V+ N +
Sbjct: 350 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G CR+  +  A K ++  +  G   ++VT+  L+    K+  +E+AF +   M++  +
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 427 GPDRYTYAAIHTALVESGRLEEAQ----KFTSI---------------MVETGKINHQVV 467
            P   T   I   L ++GR  E +    KF S                 ++ G IN   +
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN---L 525

Query: 468 QPNTSKTPEE--IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             N  +   E  I PS+++Y+  I+  C       AL++  + ++KG+ ++   Y  L++
Sbjct: 526 ASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 585

Query: 526 GLIKRR 531
           G  KRR
Sbjct: 586 GFCKRR 591


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 214/396 (54%)

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++D M      PD+ TY +++NG C  G  + AF L  +ME  KL P V+ YNT+I+ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A  L  E++  GI+PN VT++ +I   C  G+   A +++ +M E   +PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T++ LIDA  K G + EA ++ D M ++ +  + +T +++++  C   +LDEA  +  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +  + D V+Y TLI G+ + ++    ++++ EM +R ++ +T TYN +I GL Q+G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + A ++  E++  G+ P+  T+NT++ G C  G++EKA+     +     +P I T N
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I++ G+C+ G +E     F +  LKG   D V YNT+IS  C++   E+A  L  EM+E 
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
              P+   Y  +  A +  G  E + +    M   G
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 222/418 (53%), Gaps = 1/418 (0%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L+  M  +G  P+  TY ++V+G CK G    A  +++ M Q K  P V  YN +I+G C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
               +++A  L KEME+  + P+VVTY++LI+     GR  +A +L+ ++ E  I P+  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T + +I  + KEGK+ +A K+   M +    P  VTY++LI+  C    ++EA +M + M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             K    + +T NT++   C  K+++E   +    S+RG   + V+Y  LI G F+    
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A +++ EM    + P+  TYN ++ GL ++GK E+A+ +   L +S M P   T+N +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I G C  G+VE        +  K  KPD+V  N ++SG CR+G  E+A   F+     G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
             +S  YNTLI +  ++   E +  L+ EM       D  T   + T ++  GRL+++
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV-TNMLHDGRLDKS 419



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 217/411 (52%), Gaps = 1/411 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY  +++ L K+G  +   +LL+ M++  L P    YN ++ G CK   + +A
Sbjct: 11  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M      P+V TY+ LI+  CN G   +A RL  +M   K+ PDV T++ LI+ 
Sbjct: 71  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+ +EA KL DE+ +  I P+ VT++ +I  +C   ++D+A ++   M      PD
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   CK   +EE   +   M ++GL  NT+T N ++  L      D A  +  
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + ++Y TL+ G  ++ K  +A+ +++ ++  ++ P+ +TYN MI G+ ++G
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E   D+   L   G+ PD   +NT+I GFC +G  E+A     +M E    P+    N
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            L+    R+G  E + +  +     G A D+ T   L++++  + RL+ +F
Sbjct: 371 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 420



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           LID +   G +P+ VT+ +++   CK G  D A  ++  ME+    P  + YNT+ID  C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           K  +M++A  +   M  KG++ N +T ++++  LC   +  +A  LL+   +R    D  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           ++  LI  + ++ K   A KL+DEM +R I PS  TY+++I G     + ++A  M   +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           +     PD  T+NT+I GFC   +VE+ ++   +M ++    + VT NIL+ GL + G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A + F+  +  G   + +TYNTL+  LCK  +LE A  +   ++  K+ P  YTY  +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              + ++G++E+       +   G                 + P  ++Y+  I+  C +G
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKG-----------------VKPDVVAYNTMISGFCRKG 345

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             ++A  +F+E ++ G   N   Y    N LI+ R
Sbjct: 346 SKEEADALFKEMKEDGTLPNSGCY----NTLIRAR 376



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 198/408 (48%), Gaps = 19/408 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD+VTY  ++N   + G +  AF L++++++  ++P  + +N +I   CK   +D A  +
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
            + ME  G  P+ VTY++LI   C  G   +A R++  M  + +  +  T + ++     
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           E KL EA  L +   KR      V+Y +LI G+   ++ + A ++++ M  +   P   T
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I G  +  + E+ +++  E+ Q G++ +  T+N +I G    G  + A +   +MV
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRL 411
                P+I+T N LL GLC+ G LEKA+  F  ++ + K   ++ TYN +I  +CK  ++
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKV 312

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           ED + L   +  K + PD   Y  + +     G  EEA      M E G +         
Sbjct: 313 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL--------- 363

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                   P+S  Y+  I      G  + + ++ +E R  G A + ST
Sbjct: 364 --------PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 190/345 (55%), Gaps = 1/345 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTY++++  L   G+ ++   LLSDM ++ + P+  T++ L+  + K G 
Sbjct: 77  METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA ++ D M +    P + TY+ LING+C    L+EA ++ + M S    PDVVTYNT
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 196

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +  R  E  ++  E+ + G+  N VT+NI+I+   + G  D A +I + M  +G
Sbjct: 197 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYNTL+D  CK G +E+A  + + + R  ++    T N ++  +C   K+++ +
Sbjct: 257 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 316

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  + S +G   D V+Y T+I+G+ R      A  L+ EMKE   +P++  YN +I   
Sbjct: 317 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 376

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
            + G  E + +++ E+   G   D +T   ++     +G+++K+ 
Sbjct: 377 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 420



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 143/309 (46%), Gaps = 18/309 (5%)

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L++    +G   D V+YG ++ G  +    + A  L ++M++ ++ P    YN +I GL 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +    + A+++  E+   G+ P+  T++++I   C+ G+   A +  + M+E+   PD+ 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T + L+    +EG L +A K +   + +      VTY++LI+  C   RL++A  +   M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV---------QPNTS 472
             K   PD  TY  +     +  R+EE  +    M + G + + V          Q    
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 473 KTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
              +EI          P+ ++Y+  ++  C  G+ + A+ +FE  ++  +     TY  +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 524 MNGLIKRRK 532
           + G+ K  K
Sbjct: 303 IEGMCKAGK 311



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 17/148 (11%)

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + KG   D VTY  +++ LCK    + AF LL++ME+ KL P    Y  I   L +   +
Sbjct: 8   VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 67

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           ++A      M   G                 I P+ ++YS  I+  C+ GR+ DA ++  
Sbjct: 68  DDALNLFKEMETKG-----------------IRPNVVTYSSLISCLCNYGRWSDASRLLS 110

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           +  ++ I  +  T+  L++  +K  K +
Sbjct: 111 DMIERKINPDVFTFSALIDAFVKEGKLV 138


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 234/435 (53%), Gaps = 1/435 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P +  +N +L  +      N+     ++ K + +V +  ++ IL+ G C+ G ++++
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKS 182

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  +T+    P+V  Y  LI+G C  G +E+A  L  EM  L L+ +  TY  LIN 
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++G   + F++ +++ E G+ PN  T+N ++   CK+G+   A ++   M E G S +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   C+   + EA +++D M   G+  N IT NT++   C   KL +A  L  
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG     V+Y  L++G+ R    + A K+  EM+ER I PS  TY  +I   ++S 
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+AI +   + + G++PD  T++ +IHGFC +GQ+ +A +    MVEK+ +P+ V  N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+EG   +ALK  +    K  A +  +Y  +I  LCKER+ ++A  L+ +M + 
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542

Query: 425 KLGPDRYTYAAIHTA 439
            + P     + I  A
Sbjct: 543 GIDPSTSILSLISRA 557



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 238/462 (51%), Gaps = 11/462 (2%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  I+++  +   LN      ++M   G VP    +N L++         +         
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW---SFFN 153

Query: 73  QNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           +NKS  + DV+++ +LI G C AG +E++F L  E+      P+VV Y TLI+   + G 
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A  L  E+ + G+  N  T+ ++I    K G   +  ++   M+E+G  P+  TYN 
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +++  CK G  ++AF++ D M  +G+  N +T NT++  LC E KL+EA  +++     G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + ++Y TLI G+    K  +AL L  ++K R + PS  TYN ++ G  + G T  A 
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            M+ E+ + G+ P + T+  +I  F     +EKA+Q    M E    PD+ T ++L+ G 
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C +G + +A + F+S + K    + V YNT+I   CKE     A  LL EMEEK+L P+ 
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            +Y  +   L +  + +EA++    M+++G      + P+TS
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSG------IDPSTS 549



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 192/355 (54%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG  P+ V Y T++D   KKG++ + +DL  +M K GLV N  TY +L++G  K G  K+
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              + + M ++   P+++TYN ++N  C  G  ++AF++  EM    +  ++VTYNTLI 
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                 +  EA K++D++   GI PN +T+N +I  +C  GK+ KA  + R+++  G SP
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VTYN L+   C+ G+   A +M+  M  +G+K + +T   ++ T      +++A  L 
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            S  + G   D  +Y  LI G+    + N A +L+  M E+   P+   YN MI G  + 
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G + +A+ +L E+ +  + P+  ++  +I   C E + ++A +   KM++    P
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 188/331 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + +  TY  +++ LFK G   +  ++   M++ G+ PN  TYN +++  CK G 
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+A +V D M +     ++ TYN LI G C    L EA ++  +M+S  + P+++TYNT
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   G+  +A  L  +L   G+ P+ VT+NI++  +C++G    A K+V+ MEE G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTY  LID   ++ NME+A ++   M   GL  +  T + ++H  C + +++EA 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  ++    +EV Y T+I GY ++  + RALKL  EM+E+++ P+  +Y  MI  L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +  K+++A  ++ +++ SG+ P  +  + I
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 219/451 (48%), Gaps = 18/451 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y ++IN +  +  L  +     EM     +P    +N L+     S    + +   +E +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           +  +  +  +  I+IK  C+ G+I+K+  ++  + E GFSP+ V Y TLID  CK G +E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A  +   MG+ GL  N  T   +++ L       + + +     + G + +  +Y  ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
               +D +   A +++DEM+ER +  +  TYN +I GL +  K  +A  +++++   G+ 
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T+NT+I GFC  G++ KAL     +  +   P +VT NIL+SG CR+G    A K 
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            +    +G     VTY  LI +  +   +E A  L   MEE  L PD +TY+ +      
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++ EA +    MVE                 +  +P+ + Y+  I  +C +G    AL
Sbjct: 456 KGQMNEASRLFKSMVE-----------------KNCEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           ++ +E  +K +A N ++Y  ++  L K RKS
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKS 529



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 20/249 (8%)

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  +I    QS     +I   NE++ +G +P    FN ++          +   F N+  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K    D+ +  IL+ G C  G +EK+          G + + V Y TLI   CK+  +E
Sbjct: 157 SKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A  L  EM +  L  +  TY  +   L ++G  ++  +    M E G            
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG------------ 263

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                + P+  +Y+  +N+ C  GR KDA Q+F+E R++G++ N  TY  L+ GL +  K
Sbjct: 264 -----VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 533 --SISKAVD 539
               +K VD
Sbjct: 319 LNEANKVVD 327


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 234/449 (52%), Gaps = 4/449 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD  ++  ++    + G++ EV  LL+ M+ QG   +  T  ++V  +C+ G  ++ 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +  + P+V  Y   I+G C    +++AF + +EM +  L P+V T+ +LIN 
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 125 FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G +  AF+L  +L      KPN  T+ +MI  YCKEGK+ +A  ++  M E G +P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLI  +CK G+   AF +M+ M R+G + N  T N ++  LC + K+ EAY +L
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             A+ +G  LD+V+Y  +IT + +      AL L++ M E    P   TY  +I    Q 
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + E++  + ++ L   ++P + T+ ++I G+C  G+   AL+   +MV+   + D +T 
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITY 539

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+SGLC+E  LE+A   +   + K      VT  TL    C+  +   A  +L  +++
Sbjct: 540 GALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDK 599

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           ++     +T   +   L   G +E+A  F
Sbjct: 600 RR---KNHTVNVLVRKLSAIGHVEDASLF 625



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 219/437 (50%), Gaps = 4/437 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G   DN T   I+    +KG+  +V +L   M + G  PN   Y   + G CK  +
Sbjct: 211 MQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAY 270

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYN 119
           +K+A  V++ M      P+V+T+  LING C  G  E AFRL  K ++S    P+V TY 
Sbjct: 271 VKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 330

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I  + + G+   A  L+  + E G+ PN  T+  +I  +CKEG  + A +++  M   
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           GF P+  TYN LID  CK G ++EA++++ +   +GL+++ +T   ++   C +  +  A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L N  ++ G + D  +Y TLI  Y +  +   + KL+D+    +++P+  TY +MI G
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + GK+  A+ +   ++Q+G   D  T+  +I G C E ++E+A   +  M++K   P 
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT   L    CR    EKA+          K   + T N L+  L     +EDA   L 
Sbjct: 571 EVTPVTLAFEYCRR---EKAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLK 627

Query: 420 EMEEKKLGPDRYTYAAI 436
           +  +  L  DR  Y + 
Sbjct: 628 KALDVDLAVDRLAYTSF 644



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 237/505 (46%), Gaps = 21/505 (4%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD-LMTQN 74
           ++ A  + G+L E  D++ +M+  GL     T N ++      G    A +V D ++T+ 
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
             LPD  ++  LI G C  G +EE   L   M+      D  T   ++  F + GR  + 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            +L   + E G  PN V +   I   CK   + +A  ++  M   G  P+  T+ +LI+ 
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 195 NCKAGNMEEAFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
            CK G  E AFR+ + ++     K N  T   ++   C E KL  A MLL    ++G   
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           +  +Y TLI+G+ ++   N A +L ++M+     P+ +TYNA+I GL + GK ++A  +L
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
                 G+  D+ T+  +I   C +G +  AL   N+M E    PDI T   L++  C++
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             +E++ K F   +         TY ++I+  CK  +   A  +   M +     D  TY
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITY 539

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
            A+ + L +  RLEEA+         G ++ ++V       P E+ P ++++     E+C
Sbjct: 540 GALISGLCKESRLEEARALYE-----GMLDKRLV-------PCEVTPVTLAF-----EYC 582

Query: 494 SQGRYKDALQIFE--ETRQKGIAIN 516
            + +   A+ I +  + R+K   +N
Sbjct: 583 RREKAVVAVSILDRLDKRRKNHTVN 607



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 222/485 (45%), Gaps = 56/485 (11%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
           +V+ + + G L EA  +V  M ++  LP  V T N ++    + G    A ++   M + 
Sbjct: 120 MVAAFAEAGRLPEAADMVFEM-RSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTR 178

Query: 110 K-LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             LLPD  ++  LI      GR  E   L+  +   G   +  T  ++++ +C++G+   
Sbjct: 179 GGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRD 238

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
             ++ R M E G  P+ V Y   ID  CK   +++AF +++ M  KGLK N  T  ++++
Sbjct: 239 VSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLIN 298

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIM 287
            LC                K G+                     RA +L+ ++ K     
Sbjct: 299 GLC----------------KIGW-------------------TERAFRLFLKLIKSSSYK 323

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+  TY  MI G  + GK  +A  +L  +++ G+ P+  T+ T+I G C EG    A + 
Sbjct: 324 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFEL 383

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            NKM  + F+P+I T N L+ GLC++G +++A K  R    +G  +D VTY  +I+  CK
Sbjct: 384 MNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCK 443

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           +  +  A  L + M E    PD +TY  +     +  ++EE+QK     +          
Sbjct: 444 QGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAI-------- 495

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                    E+ P+  +Y+  I  +C  G+   AL++FE   Q G   +  TY  L++GL
Sbjct: 496 ---------ELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGL 546

Query: 528 IKRRK 532
            K  +
Sbjct: 547 CKESR 551



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 192/417 (46%), Gaps = 19/417 (4%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EEN 179
           ++  F E+GR  EA  ++ E+  HG+     T N +++     G    A K+   M    
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  ++  LI   C+ G MEE   ++ VM  +G  ++  T   I+   C + +  + 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L     + G   + V+Y   I G  +     +A  + +EM  + + P+ +T+ ++I G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 300 LSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           L + G TE+A  +  +L++S    P+  T+  +I G+C EG++ +A     +MVE+   P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +  T   L+SG C+EG    A +       +G   +  TYN LI  LCK+ ++++A+ +L
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
                + L  D+ TY  + T   + G +  A    + M E G                  
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG-----------------C 462

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
            P   +Y+  I  +C Q + +++ ++F++     +   K TY +++ G  K  KS S
Sbjct: 463 HPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTS 519



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  D++TY  ++  L K+ +L E R L   M  + LVP   T   L   YC+      A
Sbjct: 531 GCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVA 590

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D + + +      T N+L+      G +E+A    K+   + L  D + Y + IN 
Sbjct: 591 VSILDRLDKRRK---NHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINS 647

Query: 125 FFESGRSMEAFKLIDELDE 143
            + + +    + L  E+ E
Sbjct: 648 CYANKK----YALATEISE 662


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 237/457 (51%), Gaps = 2/457 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP+N TYN ++      G+  E   +  +M++Q ++P+  T+N+L+   CK G +KEA
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M      PDV++YN+++NG+   G L +   L   M    + P + T+N LI  
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 403

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A  + +E+ +HG+KPN +T+  +I   C+ GK+D A +    M + G +PD
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y+ LI   C  G++ +A  ++  +   G+ ++ +  ++I++ LC   ++ +A  + +
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFD 523

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G +   V Y  L+ GY    K  +AL+++D M    I P+   Y  ++ G  + G
Sbjct: 524 LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIG 583

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKMVEKSFKPDIVTC 363
           + ++ + +  E+LQ G+ P    +N II G    G+ V   ++FH +M E     +  T 
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH-EMTESGIAMNKCTY 642

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +I+L GL +    ++A+  F+        +D +T NT+I+ + + RR+E+A  L + +  
Sbjct: 643 SIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISR 702

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             L P   TY+ + T L++ G +EEA+   S M   G
Sbjct: 703 SGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/567 (25%), Positives = 264/567 (46%), Gaps = 52/567 (9%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C PD V YNT++D  FK+G +N+  DL  +M ++G+ P+  TY+ +V   CK   + 
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A   +  M     LP+ WTYN LI G+ + G  +EA R+ KEM    +LPDVVT+N L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM-------------------------- 156
               + G+  EA  + D +   G  P+  ++NIM                          
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 157 ---------IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
                    IK Y   G +DKA  I   M ++G  P+ +TY T+I A C+ G M++A   
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            + M  +G+  +    + ++   C    L +A  L++     G +LD V + ++I    +
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             +   A  ++D      + P+   Y+ ++ G    GK E+A+ + + ++ +G+ P++  
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           + T+++G+C  G++++ L    +M++K  KP  +  NI++ GL   G    A   F    
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G A++  TY+ ++  L K R  ++A  L  E+    +  D  T   +   + ++ R+E
Sbjct: 632 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 691

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA+   + +  +G +                 P  ++YS  I     +G  ++A  +F  
Sbjct: 692 EAKDLFASISRSGLV-----------------PCVVTYSIMITNLIKEGLVEEAEDMFSS 734

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKSI 534
            +  G   +     +++  L+K+ + +
Sbjct: 735 MQNAGCEPDSRLLNHVVRELLKKNEIV 761



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 257/531 (48%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +Y+ +L +L  +GK  +  DLL  M + G V  P+   YN ++ G+ K G +
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDV 235

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD  TY+ +++  C A  +++A    ++M +  +LP+  TYN L
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+    I P+ VT N+++   CK GKI +A  +   M   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  +YN +++     G + +   + D+M   G+     T N ++        LD+A +
Sbjct: 356 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 415

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G   + ++Y T+I    R  K + A++ +++M ++ + P  + Y+ +I G  
Sbjct: 416 IFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A ++++E++ +GM  D   F++II+  C  G+V  A    +  V     P  V
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             ++L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +K + P    Y  I   L E+GR   A+     M E+G                 I  +
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG-----------------IAMN 638

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +YS  +        + +A+ +F+E R   + I+  T   ++ G+ + R+
Sbjct: 639 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 689



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 254/534 (47%), Gaps = 20/534 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  +    N L+ G+C+     EA+ +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++Y++L+   C+ G   +A  L + M     +  PDVV YNT+I+ 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT++ ++   CK   +DKA   +R M   G  P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R+ +  + +T N ++ +LC   K+ EA  + +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  SY  ++ GY           L+D M    I P   T+N +I   +  G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ P+  T+ T+I   C  G+++ A++  N+M+++   PD    +
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V ++++I++LCK  R+ DA  +       
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P    Y+ +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNDVV 571

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Y   +N +C  GR  + L +F E  QKGI  +   Y  +++GL +  +++   V
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 188/359 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   T+N ++ A    G L++   + ++M+  G+ PN  TY  +++  C++G 
Sbjct: 385 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM   + M      PD + Y+ LI G+C  G L +A  L  E+ +  +  D+V +++
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSS 504

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR M+A  + D     G+ P AV +++++  YC  GK++KA ++   M   G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V Y TL++  CK G ++E   +   M +KG+K +TI  N I+  L    +   A 
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +  +  ++ G  +++ +Y  ++ G F++   + A+ L+ E++   +     T N MI G+
Sbjct: 625 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            Q+ + E+A D+   + +SG++P   T++ +I     EG VE+A    + M     +PD
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 186/380 (48%), Gaps = 5/380 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TY T++ AL + GK+++  +  + M  QG+ P++  Y+ L+ G+C  G 
Sbjct: 420 MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  ++  +  N    D+  ++ +IN  C  G + +A  +     ++ L P  V Y+ 
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +   G+  +A ++ D +   GI+PN V +  ++  YCK G+ID+   + R M + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  + YN +ID   +AG    A      M   G+ MN  T + +L  L   +  DEA 
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 659

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L          +D ++  T+I G F+  +   A  L+  +    ++P   TY+ MI  L
Sbjct: 660 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNL 719

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A DM + +  +G  PD    N ++     + ++ +A  + +K+ E++F  + 
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 779

Query: 361 VTCNILLS-----GLCREGI 375
           +T  +L+      G CRE I
Sbjct: 780 LTTMLLVDLFSSKGTCREHI 799



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 217/475 (45%), Gaps = 56/475 (11%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P   TY  L++    + R   A     +L   G++ + +  N ++K +C+  + D+A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 171 KI------------------------------------VRNMEENGF--SPDCVTYNTLI 192
            I                                    +R M E G   SPD V YNT+I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G++ +A  +   M ++G+  + +T ++++H LC  + +D+A   L     +G  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +  +Y  LI GY    +   A++++ EM+ + I+P   T+N ++  L + GK ++A D+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + +   G  PD  ++N +++G+ ++G +       + M+     P I T N+L+     
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L+KA+  F      G   + +TY T+I++LC+  +++DA    ++M ++ + PD+Y 
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKTPEEID--------- 479
           Y  +       G L +A++  S ++  G     +    +  N  K    +D         
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 480 -----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P+++ YS  ++ +C  G+ + AL++F+     GI  N   Y  L+NG  K
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 143/305 (46%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V +++I++ L K G++ + +++       GL P    Y++L+ GYC +G +++A+RV 
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      P+   Y  L+NG+C  G ++E   L +EM    + P  + YN +I+  FE+
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR++ A     E+ E GI  N  T++I+++   K    D+A  + + +       D +T 
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 677

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NT+I    +   +EEA  +   + R GL    +T + ++  L  E  ++EA  + +S   
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D      ++    +  +  RA     ++ ER       T   ++   S  G   +
Sbjct: 738 AGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797

Query: 309 AIDML 313
            I  L
Sbjct: 798 HIRFL 802


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 228/434 (52%), Gaps = 5/434 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKG---KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           F C P   ++N++L+ + + G   +  E  + +   K   ++PN  ++N+++   CKLG 
Sbjct: 137 FYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGL 196

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +   M   K +PD +TY  L++G C    ++EA  L  EM+     P   T+N 
Sbjct: 197 VDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNV 256

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G      KL+D +   G  PN VT+N +I   C +GK+DKA  ++  M  + 
Sbjct: 257 LINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSK 316

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY T+I+   K G   +  R++ +M  +G  +N    + ++  L  E K +EA 
Sbjct: 317 CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAM 376

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L   +  +G  L+ V Y  L+ G  RD K + A+K+  EM ++   P+ FT+++++ G 
Sbjct: 377 RLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGF 436

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G + +AI++  ++ +     +E  ++ +IHG C +G+V +A+    KM+    +PD+
Sbjct: 437 FEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDV 496

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL--KGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           V  + ++ GLC  G +E+ALK +   +        D +TYN L ++LCK+  +  A  LL
Sbjct: 497 VAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLL 556

Query: 419 SEMEEKKLGPDRYT 432
           + M ++   PD  T
Sbjct: 557 NSMLDRGCDPDLVT 570



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 225/446 (50%), Gaps = 20/446 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+PD  TY T++D L K  +++E   LL +M+ +G  P+  T+N+L++G CK G      
Sbjct: 212 CVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVT 271

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++VD M     +P+  TYN LI+G C  G L++A  L   M S K +P+ VTY T+IN  
Sbjct: 272 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGL 331

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + GR+++  +++  ++E G   N   +++++    KEGK ++A ++ +   + G   + 
Sbjct: 332 VKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNT 391

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+ L+D  C+    +EA +++  M  KG   N  T ++++          +A  +   
Sbjct: 392 VLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKD 451

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            +K     +EV Y  LI G  +D K   A+ +W +M      P    Y++MI GL  +G 
Sbjct: 452 MTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGS 511

Query: 306 TEQAIDMLNELL--QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            E+A+ + NE+L  +    PD  T+N + +  C +  + +A+   N M+++   PD+VTC
Sbjct: 512 VEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTC 571

Query: 364 NILLSGLCREGI--LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           NI L  L RE +   +   KF                + L+  L K +R   A  ++  M
Sbjct: 572 NIFLRML-REKLDPPQDGAKFL---------------DELVVRLLKRQRNLGASKIVEVM 615

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLE 447
            +K L P   T+A +   L +  +++
Sbjct: 616 LQKFLSPKASTWARVVHELCQPKKIQ 641



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 246/505 (48%), Gaps = 19/505 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+ ++++        N +  +L+ M+ +  V +  ++ ++   Y K     +A+ +   M
Sbjct: 74  TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRM 133

Query: 72  T-QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTLINRFFE 127
           + +    P V ++N ++N    AG  + A      +   + + +LP+V+++N +I    +
Sbjct: 134 SFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK 193

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A +L  E+      P+A T+  ++   CK  +ID+A  ++  M+  G  P   T
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N LI+  CK G+     +++D M  KG   N +T NT++H LC + KLD+A  LL+   
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 +EV+YGT+I G  +  +A    ++   M+ER  + + + Y+ ++ GL + GK+E
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  E +  G   +   ++ ++ G C + + ++A++  ++M +K   P+  T + L+
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G    G   KA++ ++       A + V Y+ LI  LCK+ ++ +A  + ++M      
Sbjct: 434 KGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCR 493

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD   Y+++   L ++G +EEA K  + M+         ++P++        P  I+Y+ 
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEML--------CLEPDSQ-------PDVITYNI 538

Query: 488 KINEHCSQGRYKDALQIFEETRQKG 512
             N  C Q     A+ +      +G
Sbjct: 539 LFNALCKQSSISRAVDLLNSMLDRG 563



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 175/399 (43%), Gaps = 58/399 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P   T+N +++ L KKG    V  L+ +M  +G VPN  TYN L+ G C  G L +A
Sbjct: 246 GCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 305

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M  +K +P+  TY  +ING    G   +  R+   ME    + +   Y+ L++ 
Sbjct: 306 LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+ G+S EA +L  E  + G K N V ++ ++   C++ K D+A KI+  M + G +P+
Sbjct: 366 LFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPN 425

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+++L+    + GN  +A  +   M +     N +  + ++H LC + K+ EA M+  
Sbjct: 426 AFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWA 485

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK--ERQIMPSTFTYNAMIWGLSQ 302
                G   D V+Y ++I G         ALKL++EM   E    P   TYN +   L +
Sbjct: 486 KMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCK 545

Query: 303 SGKTEQAID----------------------MLNE------------------------- 315
                +A+D                      ML E                         
Sbjct: 546 QSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRN 605

Query: 316 ---------LLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
                    +LQ  + P  +T+  ++H  C   +++  +
Sbjct: 606 LGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVI 644



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 24/276 (8%)

Query: 260 TLITGYFRDEKANRALKLWDEM---KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
            +I   F D    RAL+ ++ +   K+  I+P+  ++N +I  + + G  + AI++  E+
Sbjct: 152 VIIQAGFHD----RALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREM 207

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
                +PD  T+ T++ G C   ++++A+   ++M  +   P   T N+L++GLC++G  
Sbjct: 208 PVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDF 267

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +  K   +  LKG   + VTYNTLI  LC + +L+ A  LL  M   K  P+  TY  I
Sbjct: 268 TRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTI 327

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              LV+ GR  +  +   +M E G I ++ V                 YS  ++    +G
Sbjct: 328 INGLVKQGRALDGARVLVLMEERGYIVNEYV-----------------YSVLVSGLFKEG 370

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++A+++F+E+  KG  +N   Y  L++GL + RK
Sbjct: 371 KSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRK 406



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 16/313 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G + +   Y+ ++  LFK+GK  E   L  +   +G   N   Y+ LV G C+   
Sbjct: 347 MEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRK 406

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EAM+++  MT     P+ +T++ L+ G+   G   +A  + K+M  +    + V Y+ 
Sbjct: 407 PDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSV 466

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--EE 178
           LI+   + G+ MEA  +  ++   G +P+ V ++ MI+  C  G +++A K+   M   E
Sbjct: 467 LIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLE 526

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD +TYN L +A CK  ++  A  +++ M  +G   + +T N  L  L   +KLD 
Sbjct: 527 PDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML--REKLD- 583

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                        +LDE     L+    + ++   A K+ + M ++ + P   T+  ++ 
Sbjct: 584 ------PPQDGAKFLDE-----LVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVH 632

Query: 299 GLSQSGKTEQAID 311
            L Q  K +  ID
Sbjct: 633 ELCQPKKIQAVID 645



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 133/296 (44%), Gaps = 21/296 (7%)

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK-ERQIMPSTFTYNAMIWGL 300
           +LN          E S+  +   Y +    N+A++L+  M  E    P+  ++N+++  +
Sbjct: 94  VLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVI 153

Query: 301 SQSGKTEQAIDMLNELLQS---GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            Q+G  ++A++  N ++ +    ++P+  +FN II   C  G V+ A++   +M  +   
Sbjct: 154 IQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCV 213

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD  T   L+ GLC+   +++A+       ++G      T+N LI+ LCK+        L
Sbjct: 214 PDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKL 273

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           +  M  K   P+  TY  +   L   G+L++A      MV +  +               
Sbjct: 274 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCV--------------- 318

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             P+ ++Y   IN    QGR  D  ++     ++G  +N+  Y  L++GL K  KS
Sbjct: 319 --PNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKS 372


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 246/522 (47%), Gaps = 55/522 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWLKEAM 65
           P  VTYNT+LD+  K+G+ +E   LL +M+ QG     N  T+N+++S   + G L+ A+
Sbjct: 235 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAV 294

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++VD M  +K     +TYN LI      G + +A  L+ EME+  ++P VVTYN +I+  
Sbjct: 295 KLVDSMRLSKK-ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGL 353

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +  ++  A     E+   G+ P+ +T+N ++  YCK G + +A  ++ ++   G +P  
Sbjct: 354 LKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTV 413

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TYNTLID  C+ G++ EA R+ + M  +G   +  T   +++     + L  A    + 
Sbjct: 414 LTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDE 473

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +G   D  +Y T I           A +L + M  + I P T TYN +I GL ++G 
Sbjct: 474 MLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 533

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A  +  +++  G+ PD  T+  +IH  C  G + +A +  N MV    +P +VT  I
Sbjct: 534 LKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTI 593

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+   CR G L  A  +FR  +  G   + +TYN LI +LC   R   AF    EM E+ 
Sbjct: 594 LVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG 653

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P++YTY  +                                                 
Sbjct: 654 LAPNKYTYTLL------------------------------------------------- 664

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              I+ +C +G + DA++++ E  Q GI  +  T+  L  G 
Sbjct: 665 ---IDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 182/352 (51%), Gaps = 1/352 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD +TYN++L+   K G L E   LL D+++ GL P   TYN L+ GYC+LG 
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA R+ + M +    PDV TY +L+NG      L  A     EM S  L PD   YNT
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I        +  AF+L + +   GI P+ VT+N++I   CK G +  A ++   M  +G
Sbjct: 489 RICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDG 548

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PDC+TY  LI A+C+ G + EA ++++ M   GL+ + +T   ++HT C    L  AY
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAY 608

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G   +E++Y  LI       +   A + + EM ER + P+ +TY  +I G 
Sbjct: 609 GWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGN 668

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
            + G    AI +  E+ Q+G+ PD  T N +  GF  EG +  A+++   +V
Sbjct: 669 CREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENIV 719



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 194/388 (50%), Gaps = 1/388 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VTYN I+  L K  +    +   ++M+  GL+P+  TYN L++ YCK G 
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA+ ++  + +    P V TYN LI+G+C  G L EA RL++EM      PDV TY  
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   +      A +  DE+   G++P+   +N  I           A ++   M   G
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYN +ID  CK GN+++A R+   M   GL+ + IT   ++H  C    L EA 
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN     G     V+Y  L+    R      A   + +M +  I P+  TYN +I  L
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G+T  A    +E+L+ G+ P++ T+  +I G C EG    A++ + +M +    PD 
Sbjct: 634 CMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDY 693

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL 388
            T N L  G   EG +  A+++  + +L
Sbjct: 694 CTHNALFKGF-DEGHMYHAIEYMENIVL 720



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 214/493 (43%), Gaps = 53/493 (10%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+T +   PDV   N ++    +A   ++   +  EM  L++ P +VTYNTL++ F + G
Sbjct: 192 LVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEG 251

Query: 130 RSMEAFKLIDELDEHG--IKPNAVTHNIMIKWYCKEGKIDKACKIVRNM----------- 176
           R  EA  L+ E++  G     N VT N++I +  +EG ++ A K+V +M           
Sbjct: 252 RKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTY 311

Query: 177 -----------------------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
                                  E  G  P  VTYN +I    K    E A      M  
Sbjct: 312 NPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRA 371

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
            GL  + IT N++L+  C    L EA  LL    + G     ++Y TLI GY R      
Sbjct: 372 MGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAE 431

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A +L +EM E+   P   TY  ++ G  +      A +  +E+L  G+ PD   +NT I 
Sbjct: 432 ARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRIC 491

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
              +      A Q    M+ K   PD VT N+++ GLC+ G L+ A +     +  G   
Sbjct: 492 AELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQP 551

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D +TY  LI + C+   L +A  LL+ M    L P   TY  +       G L  A  + 
Sbjct: 552 DCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWF 611

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M++ G                 I+P+ I+Y+  I+  C  GR   A + F E  ++G+
Sbjct: 612 RKMLDVG-----------------IEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGL 654

Query: 514 AINKSTYMNLMNG 526
           A NK TY  L++G
Sbjct: 655 APNKYTYTLLIDG 667



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 214/437 (48%), Gaps = 29/437 (6%)

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           AFRL   +    + PDV   N ++    ++ R  +   +  E+ +  ++P  VT+N ++ 
Sbjct: 189 AFRL---VTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLD 245

Query: 159 WYCKEGKIDKACKIVRNMEENG--FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
            + KEG+ D+A  +++ ME  G  FS + VT+N +I    + G++E A +++D M R   
Sbjct: 246 SFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSK 304

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           K ++ T N ++  L     + +A  L       G     V+Y  +I G  + E+A  A  
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
            + EM+   ++P   TYN+++    ++G  ++A+ +L +L ++G+ P   T+NT+I G+C
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G + +A +   +MVE+   PD+ T  IL++G  +   L  A +FF   + KG   D  
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCF 484

Query: 397 TYNTLISSLCKERRLED---AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            YNT I   C E  L     AF L   M  K + PD  TY  I   L ++G L++A++  
Sbjct: 485 AYNTRI---CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLK 541

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + MV  G                 + P  I+Y+  I+ HC +G  ++A ++       G+
Sbjct: 542 TKMVSDG-----------------LQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584

Query: 514 AINKSTYMNLMNGLIKR 530
             +  TY  L++   +R
Sbjct: 585 QPSVVTYTILVHTCCRR 601



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL--LQSGMIPDETTFNTIIHG 334
           ++ EM + ++ P+  TYN ++    + G+ ++A  +L E+     G   ++ TFN +I  
Sbjct: 224 VYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISF 283

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
              EG +E A++  + M   S K    T N L++ L   G + KA         +G    
Sbjct: 284 LAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPT 342

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTYN +I  L K  + E A    +EM    L PD  TY ++     ++G L+EA     
Sbjct: 343 VVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLG 402

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            +   G                 + P+ ++Y+  I+ +C  G   +A ++ EE  ++G  
Sbjct: 403 DLRRAG-----------------LAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCF 445

Query: 515 INKSTYMNLMNGLIKRR 531
            +  TY  LMNG  K R
Sbjct: 446 PDVCTYTILMNGSRKVR 462


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 247/477 (51%), Gaps = 22/477 (4%)

Query: 8   PDNVTYNTILDALFK-KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           P  V +N IL  L K K     V  L + M+ +G+ P+  T +IL++ YC LG +  A  
Sbjct: 64  PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123

Query: 67  VVD----------------LMTQNKSLP-----DVWTYNMLINGWCNAGMLEEAFRLRKE 105
           V                  L+  +  L      +  TY +LING C  G    A ++ ++
Sbjct: 124 VFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQ 183

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           +E   +  +VV Y+T+I+   +     +A+ L  E+    I P  VT + +I  +C  GK
Sbjct: 184 IEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGK 243

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
              A ++   M     +PD  T+N L+DA CK G ++EA  ++ VM ++G++   +T NT
Sbjct: 244 FKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNT 303

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++   C   ++ +A  +L+  S+     +  SY  +I G+ + +  + AL L+ EM  R 
Sbjct: 304 LMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRG 363

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I P   TYN++I GL ++G+   A ++++E+  + +  D  T+N++I  FC    V+KA+
Sbjct: 364 IAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAI 423

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
               K+ E   +P++ T NIL+ GLC+ G L+ A   F+  ++KG  V++ TYN +I+ L
Sbjct: 424 ALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGL 483

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           CKE   ++A  LLS+ME+  + PD  TY  I  AL      E+AQK    MV  G +
Sbjct: 484 CKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 226/442 (51%), Gaps = 21/442 (4%)

Query: 1   MEGFGCLPDNVTYNTILD------------ALFKK---------GKLNEVRDLLSDMKKQ 39
           ME  G  PD  T + +++            ++F K         GK+NE       +   
Sbjct: 93  MESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLAL 152

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G   N  TY IL++G CK+G  + A++V+  +       +V  Y+ +I+G C   ++ +A
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDA 212

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           + L  EM   ++ P VVT+++LI  F   G+  +AF+L +E+    I P+A T NI++  
Sbjct: 213 YGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDA 272

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CKEGKI +A  ++  M + G  P  VTYNTL+D  C    + +A  ++ ++ R  +  N
Sbjct: 273 LCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPN 332

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           + + N +++  C  K +DEA  L +    RG    +V+Y +LI G  +  +   A +L D
Sbjct: 333 SRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVD 392

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM    I     TYN++I    ++   ++AI ++ ++ + G+ P+  T+N +I G C  G
Sbjct: 393 EMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGG 452

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           Q++ A      ++ K +  +  T NI+++GLC+EG+ ++A          G   D+VTY 
Sbjct: 453 QLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYE 512

Query: 400 TLISSLCKERRLEDAFGLLSEM 421
           T+I +L  +   E A  LL EM
Sbjct: 513 TIIQALFHKDENEKAQKLLREM 534



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 170/292 (58%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+N ++DAL K+GK+ E +++++ M K+G+ P   TYN L+ GYC +  + +A  V
Sbjct: 261 PDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHV 320

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + ++++ +  P+  +YN++ING+C   M++EA  L  EM    + P  VTYN+LI+   +
Sbjct: 321 LSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCK 380

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +GR   A++L+DE+  + I  + VT+N +I  +CK   +DKA  +V+ ++E+G  P+  T
Sbjct: 381 AGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCT 440

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LID  CK G ++ A  +   +  KG  +N  T N +++ LC E   DEA +LL+   
Sbjct: 441 YNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKME 500

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             G   D V+Y T+I   F  ++  +A KL  EM  + ++   F     + G
Sbjct: 501 DNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVG 552



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 201/405 (49%), Gaps = 35/405 (8%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GK+NE       +   G   N  TY IL++G CK+G  + A++V+  +       +V  Y
Sbjct: 137 GKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMY 196

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           + +I+G C   ++ +A+ L  EM   ++ P VVT+++LI  F   G+  +AF+L +E+  
Sbjct: 197 STIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVM 256

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             I P+A T NI++   CKEGKI +A  ++  M + G  P  VTYNTL+D  C    + +
Sbjct: 257 KNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGK 316

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A  ++ ++ R  +  N+ + N +++  C  K +DEA  L +    RG    +V+Y +LI 
Sbjct: 317 AKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLID 376

Query: 264 G-----------------------------------YFRDEKANRALKLWDEMKERQIMP 288
           G                                   + +++  ++A+ L  ++KE  I P
Sbjct: 377 GLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQP 436

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN +I GL + G+ + A D+  +LL  G   +  T+N +I+G C EG  ++A    
Sbjct: 437 NMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLL 496

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           +KM +    PD VT   ++  L  +   EKA K  R  ++KG  V
Sbjct: 497 SKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVV 541



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 219/460 (47%), Gaps = 32/460 (6%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNA-GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           M Q +  P +  +N ++               L  +MES  + PD+ T + LIN +   G
Sbjct: 57  MRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLG 116

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   AF +  ++ + G+              C  GK+++A     ++   GF  + VTY 
Sbjct: 117 QMTFAFSVFAKILKMGL--------------CLNGKVNEALLFHDHVLALGFHLNHVTYG 162

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+  CK G    A +++  +  K +  N +  +TI+  LC +K + +AY L +    +
Sbjct: 163 ILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVK 222

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
                 V++ +LI G+    K   A +L++EM  + I P  +T+N ++  L + GK ++A
Sbjct: 223 RIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEA 282

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
            +++  +++ G+ P   T+NT++ G+C   +V KA    + +      P+  + NI+++G
Sbjct: 283 KNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMING 342

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
            C+  ++++AL  F     +G A   VTYN+LI  LCK  R+  A+ L+ EM    +  D
Sbjct: 343 FCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPAD 402

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY ++     ++  +++A           KI    +QPN             +Y+  I
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVK------KIKEHGIQPNMC-----------TYNILI 445

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  C  G+ K+A  +F++   KG  +N  TY  ++NGL K
Sbjct: 446 DGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCK 485



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 138/246 (56%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYNT++D      ++ + + +LS + +  + PN  +YNI+++G+CK+  + EA
Sbjct: 293 GVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEA 352

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M      P   TYN LI+G C AG +  A+ L  EM +  +  D+VTYN+LI+ 
Sbjct: 353 LCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDV 412

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++    +A  L+ ++ EHGI+PN  T+NI+I   CK G++  A  + +++   G++ +
Sbjct: 413 FCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVN 472

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN +I+  CK G  +EA  ++  M   G+  + +T  TI+  L  + + ++A  LL 
Sbjct: 473 AWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLR 532

Query: 245 SASKRG 250
               +G
Sbjct: 533 EMVIKG 538



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 70/261 (26%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            L L  +M+ + + P  FT + +I      G+   A  +  ++L+ G+            
Sbjct: 86  VLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGL------------ 133

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
             C  G+V +AL FH+ ++   F  + VT  IL++GLC+ G    AL+  R   ++GK V
Sbjct: 134 --CLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQ--IEGKLV 189

Query: 394 DS--VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           ++  V Y+T+I  LCK++ + DA+GL SEM  K+                          
Sbjct: 190 NTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR-------------------------- 223

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
                                     I P+ +++S  I   C  G++KDA ++F E   K
Sbjct: 224 --------------------------IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMK 257

Query: 512 GIAINKSTYMNLMNGLIKRRK 532
            I  +  T+  L++ L K  K
Sbjct: 258 NINPDAYTFNILVDALCKEGK 278


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 266/550 (48%), Gaps = 18/550 (3%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C PD V YNT++D  FK+G +N+  DL  +M ++G+ P+  TY+ +V   CK   + 
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A   +  M     LPD WTYN LI G+ + G  +EA R+ KEM    +LPDVV  NTL+
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
               + G+  EA  + D +   G  P+  ++ IM+  Y  +G +     +   M  +G +
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P   T+N LI A    G +++A  + + M   G+K + +T  T++  LC   K+D+A   
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N    +G   D+ +Y  LI G+       +A +L  E+    +      + ++I  L +
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+   A ++ +  +  G+ PD   +N ++ G+C  G++EKAL+  + MV    +P++V 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L++G C+ G +++ L  FR  + KG    ++ YN +I  L +  R   A     EM 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA------QKFTSIMVETGKINHQVVQPNTSKTPE 476
           E  +  ++ TY+ +   L ++   +EA       +  ++ ++   +N  +     ++  E
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693

Query: 477 E------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           E            + P +++YS  I     +G  ++A  +F   +  G   +     +++
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753

Query: 525 NGLIKRRKSI 534
             L+K+ + +
Sbjct: 754 RELLKKNEIV 763



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 253/534 (47%), Gaps = 20/534 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  +    + L+ G+C+     EA+ +
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++YN+L+   CN G   +A  L + M     +  PDVV YNT+I+ 
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT++ ++   CK   +DKA   +R M   G  PD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R+ +  + + LNT++ +LC   K+ EA  + +
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  SY  ++ GY           L+D M    I P   T+N +I   +  G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ P   T+ T+I   C  G+++ A++  N+M+++   PD    +
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V + ++I++LCK  R+ DA  +       
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD   Y  +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNVVG 573

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Y   +N +C  GR  + L +F E  QKGI  +   Y  +++GL +  +++   V
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 255/531 (48%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +YN +L +L  +GK  +  DLL  M + G V  P+   YN ++ G+ K G +
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD+ TY+ +++  C A  +++A    ++M +  +LPD  TYN L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+    I P+ V  N ++   CK GKI +A  +   M   G 
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  +Y  +++     G + +   + D+M   G+     T N ++        LD+A +
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 417

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G     V+Y T+I    R  K + A++ +++M ++ ++P  + Y+ +I G  
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A ++++E++ +GM  D   F +II+  C  G+V  A    +  V     PD V
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N+L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +K + P    Y  I   L E+GR   A+     M E+G                 I  +
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG-----------------IAMN 640

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +YS  +        + +A+ +F+E R   + I+  T   ++ G+ + R+
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 189/359 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P   T+N ++ A    G L++   + ++M+  G+ P+  TY  +++  C++G 
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM   + M     +PD + Y+ LI G+C  G L +A  L  E+ +  +  D+V + +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR M+A  + D     G+ P+AV +N+++  YC  GK++KA ++   M   G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V Y TL++  CK G ++E   +   M +KG+K +TI  N I+  L    +   A 
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +  +  ++ G  +++ +Y  ++ G F++   + A+ L+ E++   +     T N MI G+
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            Q+ + E+A D+   + +SG++P   T++ +I     EG VE+A    + M     +PD
Sbjct: 687 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 186/380 (48%), Gaps = 5/380 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VTY T++ AL + GK+++  +  + M  QG+VP++  Y+ L+ G+C  G 
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  ++  +  N    D+  +  +IN  C  G + +A  +     ++ L PD V YN 
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +   G+  +A ++ D +   GI+PN V +  ++  YCK G+ID+   + R M + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  + YN +ID   +AG    A      M   G+ MN  T + +L  L   +  DEA 
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L          +D ++  T+I G F+  +   A  L+  +    ++P   TY+ MI  L
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A DM + +  +G  PD    N ++     + ++ +A  + +K+ E++F  + 
Sbjct: 722 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 781

Query: 361 VTCNILLS-----GLCREGI 375
           +T  +L+      G CRE I
Sbjct: 782 LTAMLLVDLFSSKGTCREQI 801



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 213/475 (44%), Gaps = 56/475 (11%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P   TY  L++    + R   A     +L   G++ +A+  + ++K +C+  + D+A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 171 KI------------------------------------VRNMEENG--FSPDCVTYNTLI 192
            I                                    +R M E G   SPD V YNT+I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G++ +A  +   M ++G+  + +T ++++H LC  + +D+A   L     +G  
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  +Y  LI GY    +   A++++ EM+ + I+P     N ++  L + GK ++A D+
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + +   G  PD  ++  +++G+ ++G +       + M+     P I T N+L+     
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L+KA+  F      G     VTY T+I++LC+  +++DA    ++M ++ + PD+Y 
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKTPEEID--------- 479
           Y  +       G L +A++  S ++  G     +    +  N  K    +D         
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 480 -----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P ++ Y+  ++ +C  G+ + AL++F+     GI  N   Y  L+NG  K
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 583



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 144/305 (47%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V + +I++ L K G++ + +++       GL P+   YN+L+ GYC +G +++A+RV 
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      P+V  Y  L+NG+C  G ++E   L +EM    + P  + YN +I+  FE+
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR++ A     E+ E GI  N  T++I+++   K    D+A  + + +       D +T 
Sbjct: 620 GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 679

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NT+I    +   +EEA  +   + R GL    +T + ++  L  E  ++EA  + +S   
Sbjct: 680 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQN 739

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D      ++    +  +  RA     ++ ER       T   ++   S  G   +
Sbjct: 740 AGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799

Query: 309 AIDML 313
            I  L
Sbjct: 800 QIRFL 804


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 266/531 (50%), Gaps = 2/531 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+P+ V YN ++D   ++G +     LL +M+ +GL+P   TY  L+S   + G L+
Sbjct: 287 GAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLE 346

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +   ++  M + +  P+V  YN +I+  C      +A  + K+M +    PD +T++TLI
Sbjct: 347 KIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLI 406

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  EA +L+ E     + PN  ++  +I  +C  G++  A  ++  M E G +
Sbjct: 407 SGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHT 466

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT+  LI     AG + EA  + + M  + L  +    N ++  LC +K L  A  L
Sbjct: 467 PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNL 526

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           +    ++  + D+  Y TLI G+ R+E  + A K+++ M+++ I P    YNAMI G  Q
Sbjct: 527 IEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQ 586

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G   +A++ ++ + + G IPDE T+ T+I G+  +G +  AL     M+++  +P++V 
Sbjct: 587 FGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVA 646

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + L++G C+ G  + A   F S   +G   + +TY  LI SL K+ ++  A      M 
Sbjct: 647 YSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYML 706

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
             +  P+ YT  ++ T L  S     +   +S +   GK    ++    +   +  DP +
Sbjct: 707 LNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGK--GALLDIFRALVNDRCDPRN 764

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            +Y+  I   C      +AL +  +   KG   + +T+++L+ G     KS
Sbjct: 765 SAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKS 815



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 252/533 (47%), Gaps = 17/533 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E  G LP     N +L  L ++ + ++ R L  +M  +    +  +  ++V G C  G +
Sbjct: 216 EHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLV 275

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           ++ +++++       +P+   YN+LI+G+C  G +     L  EME+  LLP VVTY TL
Sbjct: 276 EKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTL 335

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++     G   +   L+ E+ E  + PN   +N +I   CK     +A  +++ M   G 
Sbjct: 336 MSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGC 395

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD +T++TLI   C+ G ++EA R++    R  L  N  +  +++H  C   ++  A  
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASN 455

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL    +RG+  D V++G LI G     + + AL + ++M  RQ++P    YN +I GL 
Sbjct: 456 LLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLC 515

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +      A +++ E+L+  + PD+  + T+I GF     +++A +    M +K   PD+V
Sbjct: 516 KKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVV 575

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++ G C+ G++ +A++   +    G+  D  TY TLI    K+  +  A  LL +M
Sbjct: 576 GYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDM 635

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +++  P+   Y+++     + G  + A+         G +  Q + PN           
Sbjct: 636 MKRRCQPNVVAYSSLINGYCKLGDTDAAECL------FGSMESQGLFPNV---------- 679

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            I+Y+  I     + +   A   FE       + N  T  +L+ GL     SI
Sbjct: 680 -ITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASI 731



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 242/548 (44%), Gaps = 22/548 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGL---VPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           ++ +L  L + G+ + V   L DM   G    VP R     LV+ Y   G   +A  +  
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 70  LMTQNK-SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
              ++  +LP     N L+         ++A +L  EM + +   D  +   ++      
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +  KLI+     G  PNAV +N++I  YC+ G + +   ++  ME  G  P  VTY
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            TL+    + G++E+   ++  M  + L  N    N+++  LC  +   +A ++L     
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D +++ TLI+G  ++ +   A +L  E    ++ P+  +Y ++I G    G+   
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A ++L E+++ G  PD  TF  +IHG    GQV +AL    KM  +   PD    N+L+S
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC++ +L  A       + +    D   Y TLI    +   L++A  +   ME+K + P
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV----------QPNTSKT---- 474
           D   Y A+     + G + EA +  S M + G+I  +            Q N S      
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632

Query: 475 ----PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                    P+ ++YS  IN +C  G    A  +F     +G+  N  TY  L+  L K+
Sbjct: 633 CDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKK 692

Query: 531 RKSISKAV 538
            K +  A+
Sbjct: 693 DKVVRAAM 700



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 228/501 (45%), Gaps = 56/501 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G LP  VTY T++  L +KG L ++  LLS+M+++ L PN   YN ++   CK   
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRS 379

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ V+  M      PD  T++ LI+G C  G ++EA RL +E    +L P++ +Y +
Sbjct: 380 ASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVT---------------------------- 152
           LI+ F   G  + A  L+ E+ E G  P+ VT                            
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499

Query: 153 -------HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                  +N++I   CK+  +  A  ++  M E    PD   Y TLID   +  +++EA 
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++ + M +KG+  + +  N ++   C    ++EA   +++  K G   DE +Y TLI GY
Sbjct: 560 KIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGY 619

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +    + AL L  +M +R+  P+   Y+++I G  + G T+ A  +   +   G+ P+ 
Sbjct: 620 AKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNV 679

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR------------- 372
            T+  +I     + +V +A  +   M+     P+  T + L++GLC              
Sbjct: 680 ITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSST 739

Query: 373 -----EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                +G L   L  FR+ +       +  YN +I SLC    L +A  L ++M  K   
Sbjct: 740 VNLHGKGAL---LDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYK 796

Query: 428 PDRYTYAAIHTALVESGRLEE 448
           PD  T+ ++       G+  E
Sbjct: 797 PDSATFLSLLYGFCSVGKSRE 817



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 15/264 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD V YN ++    + G +NE  + +S M+K G +P+  TY  L+ GY K G 
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ ++  M + +  P+V  Y+ LING+C  G  + A  L   MES  L P+V+TY  
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTI 684

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE--GKIDKACKIVRNMEE 178
           LI   F+  + + A    + +  +   PN  T + ++   C      I   C    N+  
Sbjct: 685 LIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHG 744

Query: 179 NGF-------------SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
            G               P    YN +I + C    + EA  + + M  KG K ++ T  +
Sbjct: 745 KGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLS 804

Query: 226 ILHTLCCEKKLDEAYMLLNSASKR 249
           +L+  C   K  E   +L +  +R
Sbjct: 805 LLYGFCSVGKSREWRTILPNEFQR 828



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 39/85 (45%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P N  YN I+ +L     L E  DL + M  +G  P+  T+  L+ G+C +G  +E  
Sbjct: 760 CDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWR 819

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGW 90
            ++    Q   L     Y +L + +
Sbjct: 820 TILPNEFQRDELEVASRYKILFDQY 844


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 198/369 (53%), Gaps = 35/369 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  P+ V+YNTI+     +G +   R +L  M+ +G+ P+  TY  L+SG CK G 
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  + D M +   +P+  TYN LI+G+CN G LE AF  R EM    ++P V TYN 
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG---------------- 164
           L++  F  GR  EA  +I E+ + GI P+A+T+NI+I  Y + G                
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378

Query: 165 -------------------KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                              ++ +A  +   + + G SPD + +N +ID +C  GN+E AF
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M RK +  + +T NT++   C E K++EA MLL+    RG   D +SY TLI+GY
Sbjct: 439 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGY 498

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R      A  + DEM      P+  TYNA+I  L ++ + + A ++L E++  G+ PD+
Sbjct: 499 GRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 558

Query: 326 TTFNTIIHG 334
           +T+ ++I G
Sbjct: 559 STYLSLIEG 567



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 199/367 (54%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           G L++A      ME L   P+VV+YNT+I+ +   G    A +++D +   GI+P++ T+
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
             +I   CKEG++++A  +   M E G  P+ VTYNTLID  C  G++E AF   D M +
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           KG+  +  T N ++H L  E ++ EA  ++    K+G   D ++Y  LI GY R   A R
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L +EM  + I P+  TY ++I+ LS+  + ++A D+  ++L  G+ PD   FN +I 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C+ G VE+A     +M  KS  PD VT N L+ G CREG +E+A         +G   
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D ++YNTLIS   +   ++DAF +  EM      P   TY A+   L ++   + A++  
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 454 SIMVETG 460
             MV  G
Sbjct: 547 KEMVNKG 553



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 211/396 (53%), Gaps = 2/396 (0%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           +V  + + D L  +GKL + R+ +  M+  G  PN  +YN ++ GY   G ++ A R++D
Sbjct: 175 SVKSSIVFDLL--EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 232

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M      PD +TY  LI+G C  G LEEA  L  +M  + L+P+ VTYNTLI+ +   G
Sbjct: 233 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 292

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
               AF   DE+ + GI P+  T+N+++     EG++ +A  +++ M + G  PD +TYN
Sbjct: 293 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 352

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+   + GN + AF + + M  KG++   +T  ++++ L    ++ EA  L      +
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D + +  +I G+  +    RA  L  EM  + + P   T+N ++ G  + GK E+A
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +L+E+   G+ PD  ++NT+I G+   G ++ A    ++M+   F P ++T N L+  
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           LC+    + A +  +  + KG + D  TY +LI  +
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 187/370 (50%), Gaps = 17/370 (4%)

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           EGK+ KA + +  ME  GF P+ V+YNT+I      GN+E A R++D M  KG++ ++ T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
             +++  +C E +L+EA  L +   + G   + V+Y TLI GY       RA    DEM 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           ++ IMPS  TYN ++  L   G+  +A DM+ E+ + G+IPD  T+N +I+G+   G  +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +A   HN+M+ K  +P  VT   L+  L R   +++A   F   + +G + D + +N +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              C    +E AF LL EM+ K + PD  T+  +       G++EEA+     M   G  
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG-- 483

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          I P  ISY+  I+ +  +G  KDA  + +E    G      TY  
Sbjct: 484 ---------------IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528

Query: 523 LMNGLIKRRK 532
           L+  L K ++
Sbjct: 529 LIKCLCKNQE 538


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 219/390 (56%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           +LD L K+G +   R L+ ++  +G+  N  TYN  + GY K   L     ++ LM +  
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
              +V TY +LI+G+ N G +EEA RL +EM    +  DV  Y ++I+    SG    A 
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L DE+ + G+ P+A T+  +I   CK G+++ A  +V  M+  G   + V +NTLID  
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C++G ++EA R+  VM +KGL+ +    N+I   LC   + DEA  LL S  +RG   + 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           +S+ TLI  Y ++     A +++ EM+E+  +P+  TYN +I G S+ G  ++A  + +E
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 534

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           L   G+IPD  T  ++IHG C +G+V+ AL+  ++M ++   P++VT   ++SGL ++G 
Sbjct: 535 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 594

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            E+A K +      G   D   Y++L+ SL
Sbjct: 595 SEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 192/366 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   + VTYN  ++  FK+  L  V ++L+ M+K+G+  N  TY +L+ G+  +G ++EA
Sbjct: 259 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 318

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+ + M +     DV+ Y  +I+  C +G ++ A  L  EM    L+P   TY  LI+ 
Sbjct: 319 QRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHG 378

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G+   A  L++E+   GI  N V  N +I  YC+ G +D+A ++   ME+ G   D
Sbjct: 379 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESD 438

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN++    CK    +EA  ++  M  +G+  NT++  T++   C E    EA  +  
Sbjct: 439 VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFR 498

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + ++Y  LI GY +      A KL DE++ R ++P  +T  ++I G    G
Sbjct: 499 EMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDG 558

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+ + +E+ Q G++P+  T+  +I G   +G+ E+A + +++M E    PD    +
Sbjct: 559 KVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYS 618

Query: 365 ILLSGL 370
            L+  L
Sbjct: 619 SLVGSL 624



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 220/435 (50%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
             E  +    M+K+G   +  +  + +    + G +   +R    M        V++  +
Sbjct: 175 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           +++G C  G +E   +L  E+ +  +  +VVTYN  I  +F+        +++  +++ G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           +  N VT+ ++I  +   GKI++A ++   M E G   D   Y ++I  NC++GN++ A 
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M  KGL  +  T   ++H +C   +++ A ML+N    +G  L+ V + TLI GY
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                 + AL+L   M+++ +    F YN++  GL +  + ++A  +L  +++ G+ P+ 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            +F T+I  +C EG   +A +   +M EK   P+I+T N+L+ G  + G +++A K    
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 534

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +G   D  T  +LI   C + +++ A  L  EM ++ L P+  TY A+ + L + GR
Sbjct: 535 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 594

Query: 446 LEEAQKFTSIMVETG 460
            EEA K    M ETG
Sbjct: 595 SEEAFKLYDEMKETG 609



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 225/465 (48%), Gaps = 12/465 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  +    L AL + G+++        M    +     +  I++ G CK G 
Sbjct: 185 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 244

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGW---CNAGMLEEAFRLRKEMESLKLLPDVVT 117
           ++   +++D +       +V TYN  I G+    + G + E   L   ME   +  +VVT
Sbjct: 245 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL---MEKEGVACNVVT 301

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  LI+ F   G+  EA +L +E+ E GI+ +   +  +I   C+ G + +A  +   M 
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  P   TY  LI   CKAG ME A  +++ M  KG+ +N +  NT++   C    +D
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  L     K+G   D  +Y ++ +G  +  + + A  L   M ER + P+T ++  +I
Sbjct: 422 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 481

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               + G   +A  +  E+ + G +P+  T+N +I G+   G +++A +  +++  +   
Sbjct: 482 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 541

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD+ TC  L+ G C +G ++ ALK F     +G   + VTY  +IS L K+ R E+AF L
Sbjct: 542 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             EM+E  L PD   Y+++       G L  A +  S+ ++  ++
Sbjct: 602 YDEMKETGLTPDDTVYSSL------VGSLHSADESISMQIQGSQV 640



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 177/380 (46%), Gaps = 23/380 (6%)

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPD---CVTYNTLIDANCKAGNMEEAFRMMDV 210
           +++ + Y       +A +   +ME+ GF  D   C+ Y   + A  + G ++   R    
Sbjct: 163 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVY---LLALRRGGQVDSCLRFFRR 219

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M    +++   +L  +L  LC    ++    L++  + +G   + V+Y   I GYF+   
Sbjct: 220 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
                ++   M++  +  +  TY  +I G S  GK E+A  +  E+ + G+  D   + +
Sbjct: 280 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS 339

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           II   C  G V++AL   ++M +K   P   T   L+ G+C+ G +E A         KG
Sbjct: 340 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
             ++ V +NTLI   C+   +++A  L   ME+K L  D + Y +I + L +  R +EA+
Sbjct: 400 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 459

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                MVE G                 + P+++S++  I+ +C +G + +A ++F E  +
Sbjct: 460 GLLFSMVERG-----------------VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502

Query: 511 KGIAINKSTYMNLMNGLIKR 530
           KG   N  TY  L++G  KR
Sbjct: 503 KGNVPNIITYNVLIDGYSKR 522



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 137/352 (38%), Gaps = 66/352 (18%)

Query: 218 MNTITLNTIL--HTLCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRA 274
           +N+ T++ IL  H L  E  LD  + +     ++ YY  ++ +Y TLI   +R  K+++ 
Sbjct: 56  LNSQTVHLILSNHILTAESCLDFFHFI-----RKNYYKPDLRAYITLIFKLYRSRKSDKL 110

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI--DMLNELLQSGMIPDETTFNTII 332
            K     + R +    F   A+  GL        ++  D  NE   +     E  F+ + 
Sbjct: 111 HKSQKFAEIRHL----FNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLF 166

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI----- 387
             +       +AL+    M +K F  D  +C + L  L R G ++  L+FFR  +     
Sbjct: 167 RVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVE 226

Query: 388 ------------------------------LKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
                                          KG   + VTYN  I    K   L     +
Sbjct: 227 VTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEI 286

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L+ ME++ +  +  TY  +       G++EEAQ+    M E G                 
Sbjct: 287 LTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG----------------- 329

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+     Y+  I+ +C  G  K AL +F+E   KG+  +  TY  L++G+ K
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 381


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 252/523 (48%), Gaps = 34/523 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   ++N +L  L K    ++V  L + M+  GL  +R T NIL++  C +  L+E    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              + +    P++ TYN LI G C    + EA RL   M+ L   PDVVTY TLI     
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 128 SGRSMEAFKLIDEL------DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME---- 177
           +G    A KL  E+       E   KPN +T+NI++   CK G+ D+A ++   M+    
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 178 ------ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                 + G  PD VT+N LID  CK G + EA +++ VM   G+  + +T N+++   C
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
               L+ A  L  S   +G   D +SY  LI GY +  K   A+KL++EM      P+  
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TY++++ G+  +GK + A  + + +   G+  +  T+   + G C    + +A++   ++
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
              +FK +I   N L+ GLC+ G LE A + F     +G   + VTY  +I   C+E ++
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           + A  L+ +ME     PD  TY  +     ES +LEE  +            H++ Q   
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLL----------HRMAQ--- 533

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE-TRQKGI 513
               +++ P +I+ S  ++      +Y++ L +      QKG+
Sbjct: 534 ----KDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 232/461 (50%), Gaps = 16/461 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D  T N +L+ L    +L E     + + ++G  PN  TYN L+ G C    + EA
Sbjct: 99  GLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEA 158

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES------LKLLPDVVTY 118
            R+   M +    PDV TY  LI G C  G +  A +L +EM +      +   P+V+TY
Sbjct: 159 TRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITY 218

Query: 119 NTLINRFFESGRSMEAFKLIDELD----------EHGIKPNAVTHNIMIKWYCKEGKIDK 168
           N +++   + GR  EA +L +E+           + G++P+ VT N++I   CKEGK+ +
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 278

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A K++  M E+G  PD VTYN+LI+  C  G++  A  +   M  KG + + I+ N +++
Sbjct: 279 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 338

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
                 K++EA  L N     G   + ++Y +L+ G F   K + A KL+  MK   I  
Sbjct: 339 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 398

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +++TY   + GL ++    +A+ +  EL  S    +    N +I G C  G++E A +  
Sbjct: 399 NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELF 458

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            K+  +  +P++VT  I++ G CREG ++KA    +     G   D +TYNTL+    + 
Sbjct: 459 EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 518

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
            +LE+   LL  M +K + PD  T + +   L +  + +E 
Sbjct: 519 NKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQEC 559



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 231/443 (52%), Gaps = 17/443 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTYNT++  L  + +++E   L   M+K G  P+  TY  L+ G C  G +  A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193

Query: 65  MRVVDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP----- 113
           +++   M  + S       P+V TYN++++G C  G  +EA +L +EM++  ++P     
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLD 253

Query: 114 -----DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
                D+VT+N LI+   + G+ +EA KL+  + E GI P+ VT+N +I+ +C  G ++ 
Sbjct: 254 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 313

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A ++  +M   G  PD ++YN LI+   K   +EEA ++ + M   G + N IT +++L 
Sbjct: 314 ARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK 373

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            +    K+D+A  L +     G   +  +YG  + G  +++    A+KL+ E+K      
Sbjct: 374 GIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKL 433

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
                N +I GL ++GK E A ++  +L   G  P+  T+  +IHGFC EGQV+KA    
Sbjct: 434 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 493

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            KM      PDI+T N L+ G      LE+ ++       K  + D++T + ++  L K+
Sbjct: 494 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 553

Query: 409 RRLEDAFGLLSEMEEKKLGPDRY 431
            + ++   LL     +K G D++
Sbjct: 554 EKYQECLHLLPRFPIQK-GVDKH 575



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 232/504 (46%), Gaps = 51/504 (10%)

Query: 55  YCKLGWLK--EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
           +CK G +    A+    LM ++   P + ++N L++G        + F L  +M    L 
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
            D  T N L+N      R  E F     +   G  PN VT+N +IK  C E +I +A ++
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR----MMDVMGRKGL--KMNTITLNTI 226
              M++ G +PD VTY TLI   C  GN+  A +    M++ + R  +  K N IT N I
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +  LC   + DEA  L      +G                          + +EM ++ +
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGM-------------------------IPNEMLDQGL 256

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P   T+N +I  L + GK  +A  +L  +++SG++PD  T+N++I GFC  G +  A +
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
               M  K  +PD+++ N+L++G  +   +E+A+K +   +L GK  + +TY++L+  + 
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 376

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQ 465
              +++DA  L S M+   +  + YTY      L ++  L EA K FT +     K+  +
Sbjct: 377 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 436

Query: 466 --------VVQPNTSKTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEET 508
                   + +    +T  E+         +P+ ++Y+  I+  C +G+   A  + ++ 
Sbjct: 437 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
              G   +  TY  LM G  +  K
Sbjct: 497 EANGCTPDIITYNTLMRGFYESNK 520



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 189/398 (47%), Gaps = 51/398 (12%)

Query: 1   MEGFGCLPDNV-----------------------------------------TYNTILDA 19
           M+  GC PD V                                         TYN I+D 
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224

Query: 20  LFKKGKLNEVRDLLSDMKKQGLVPNR----------TTYNILVSGYCKLGWLKEAMRVVD 69
           L K G+ +E + L  +MK QG++PN            T+N+L+   CK G + EA +++ 
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           +M ++  +PD+ TYN LI G+C  G L  A  L   M S    PDV++YN LIN + ++ 
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +  EA KL +E+   G +PN +T++ ++K     GK+D A K+   M+ +G + +  TY 
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
             +D  CK   + EA ++   +     K+    LN ++  LC   KL+ A+ L    S  
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G+  + V+Y  +I G+ R+ + ++A  L  +M+     P   TYN ++ G  +S K E+ 
Sbjct: 465 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEV 524

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           + +L+ + Q  + PD  T + ++     + + ++ L  
Sbjct: 525 VQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 562


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 252/558 (45%), Gaps = 90/558 (16%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY  ++ AL + G+++    +L+++++ G+ P   TYN+L+   CK G ++EA R+
Sbjct: 209 PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRL 268

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M + +  P + T+ +LI+G        E   + +EM+   + P+ V YN +I     
Sbjct: 269 KGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCR 328

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA KL DE+   GIK   VT+N++ K  CKEG+++ A KI+  M   G    C  
Sbjct: 329 KGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388

Query: 188 YNTLI----------------------------DA--------NCKAGNMEEAFRM-MDV 210
           +N+++                            DA         CK+G  EEA  +   V
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +G KGL +N  T N ++H LC    + EA  +L +    G  LD ++Y  +I G  +  K
Sbjct: 449 LG-KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASK 507

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A++L D+M +R   P  FT+N  +      GK E+ + +L+++   G+ PD  T+ T
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG--------------------- 369
           II G+C    + KA ++  ++++   +P+ V  N L+ G                     
Sbjct: 568 IIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNG 627

Query: 370 --------------LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
                         +C  G++E+    F   I+K   +  + Y  +I   CK  ++++A 
Sbjct: 628 IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAV 687

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
               EM  + + P++ TY  +  A  +SG  EEA K    MV  G               
Sbjct: 688 MYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLG--------------- 732

Query: 476 EEIDPSSISYSEKINEHC 493
             I P S+SY+  I+  C
Sbjct: 733 --IVPDSVSYNTLISGFC 748



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 244/491 (49%), Gaps = 11/491 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GFG  P+ V YN ++    +KG  +E   L  +M  +G+     TYN++    CK G 
Sbjct: 307 MQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGE 366

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWC--NAGMLEEAFRLRKEMESLKLLPDVVTY 118
           ++ A +++D M     +     +N ++  W     G L+   RL +EM +  L P+    
Sbjct: 367 MEHAEKILDEMLLAGMMVHCSLFNSVV-AWHLRGTGRLDLVLRLIREMLARFLKPNDALM 425

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
              I    +SG+  EA ++  ++   G+  N  T N +I   C+   + +A K+++ M  
Sbjct: 426 TACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVN 485

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G   D +TYN +I   CKA  M+EA ++ D M ++G K +  T N  LHT C   K++E
Sbjct: 486 SGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEE 545

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              LL+     G   D V+YGT+I GY + +  ++A +   E+ +  + P+   YNA+I 
Sbjct: 546 ILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIG 605

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  ++G    AI +L+ +  +G+ P   T+N++++  C  G VE+      + + K  + 
Sbjct: 606 GYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIEL 665

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            ++   I++ G C+ G +++A+ +F+    +G   + +TY TL+ +  K    E+A  L 
Sbjct: 666 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF 725

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET-GKINHQVVQPNTSKTPEE 477
            EM    + PD  +Y  + +   E   L++       MVE+  +++ QV++ +       
Sbjct: 726 DEMVSLGIVPDSVSYNTLISGFCEVDSLDK-------MVESPAEMSSQVLKQDGCSYNAF 778

Query: 478 IDPSSISYSEK 488
           +D  +  + +K
Sbjct: 779 VDGITTPWCQK 789



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 35/334 (10%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N ++  L +   + E   +L  M   G+  +R TYNI++ G CK   + EA+++ D M
Sbjct: 459 TSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    PD++T+N+ ++ +CN G +EE   L  +M+S  L PD+VTY T+I+ + ++   
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A + + EL ++G++PNAV +N +I  Y + G I  A  I+  M+ NG  P  VTYN+L
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +   C AG +EE   +      K +++  I    I+   C   K+DEA M       RG 
Sbjct: 639 MYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGI 698

Query: 252 -----------------------------------YLDEVSYGTLITGYFRDEKANRALK 276
                                                D VSY TLI+G+   +  ++ ++
Sbjct: 699 PPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVE 758

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              EM  + +     +YNA + G++     ++A+
Sbjct: 759 SPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAV 792



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 23/214 (10%)

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV--D 394
           + G + +A     ++  +   P I TC+IL+  L   G L+ A K F   +  GK V  D
Sbjct: 152 APGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVF-GEMRDGKTVAPD 210

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             TY  +I +LC+   ++ AF +L+E+    + P   TY  +  AL +SGR+EEA +   
Sbjct: 211 VHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKG 270

Query: 455 IMVETGKINHQVVQ--------------PNTSKTPEE-----IDPSSISYSEKINEHCSQ 495
            MVE G++   +V                      +E     I P+ + Y+E I  HC +
Sbjct: 271 RMVE-GRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK 329

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           G   +AL++F+E   KGI     TY  +   L K
Sbjct: 330 GHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCK 363


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 237/455 (52%), Gaps = 5/455 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  PD V+Y T+++  FK+G   +      +M  + + P+  TY+ +++  CK   + 
Sbjct: 189 GGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMD 248

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE-----MESLKLLPDVVT 117
           +AM V+  M +N  +P+  TY  +++G+C++G  +EA    K+     +E   L PD+ T
Sbjct: 249 KAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIAT 308

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y TL+  +   G  +    L+D +  +GI P+   +NI+I  Y K+GK+D+A  +   M 
Sbjct: 309 YCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMR 368

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G +PD VTY  +I   CK+G +E+A    + M  +GL    I  N+++H LC   K +
Sbjct: 369 QQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 428

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  L+     RG  L+ + + ++I  + ++ +   + KL+D M    + P   TY+ +I
Sbjct: 429 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 488

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G   +GK ++A+ +L+ ++  G+ P+  T+ T+I+G+C   ++  AL    +M      
Sbjct: 489 DGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVS 548

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PDI+T NI+L GL +      A + +      G  ++  TYN ++  LCK +  +DA  +
Sbjct: 549 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRM 608

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
              +    L  +  T+  +  AL++ GR  EA+  
Sbjct: 609 FQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 265/566 (46%), Gaps = 61/566 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY  ++    +  +L+     L ++ K+G      T+  L+ G C      +AM +
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +PDV++  +L+ G C+    +EA  L   M   +     PDVV+Y T+IN
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF+ G S +A+    E+ +  I P+ VT++ +I   CK   +DKA +++ +M +NG  P
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMM-----DVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +C TY +++   C +G  +EA   +     D +   GL+ +  T  T+L     +  L  
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG 324

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            + LL+   + G + D   Y  LI  Y +  K + A+ ++ +M+++ + P   TY A+I 
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS--------------------- 337
            L +SG+ E A+    +++  G+ P    +N++IHG C+                     
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 338 --------------EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
                         EG+V ++ +  + MV    KPDI+T + L+ G C  G +++A+K  
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
              +  G   ++VTY TLI+  CK  R+ DA  L  EME   + PD  TY  I   L ++
Sbjct: 505 SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            R   A++    + E+G                +I+ S  +Y+  ++  C      DAL+
Sbjct: 565 RRTAAAKELYVRITESGT---------------QIELS--TYNIILHGLCKNKLTDDALR 607

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           +F+      + +   T+  +++ L+K
Sbjct: 608 MFQNLCLMDLKLEARTFNIMIDALLK 633



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 237/491 (48%), Gaps = 40/491 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM-- 65
           PD VTY++I+ AL K   +++  ++L+ M K G++PN  TY  ++ GYC  G  KEA+  
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGF 288

Query: 66  --------------------------------------RVVDLMTQNKSLPDVWTYNMLI 87
                                                  ++DLM +N   PD + YN+LI
Sbjct: 289 LKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILI 348

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
             +   G ++EA  +  +M    L PD VTY  +I    +SGR  +A    +++ + G+ 
Sbjct: 349 CAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 408

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P  + +N +I   C   K ++A +++  M + G   + + +N++ID++CK G + E+ ++
Sbjct: 409 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 468

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D+M R G+K + IT +T++   C   K+DEA  LL+     G   + V+Y TLI GY +
Sbjct: 469 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCK 528

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
             +   AL L+ EM+   + P   TYN ++ GL Q+ +T  A ++   + +SG   + +T
Sbjct: 529 ISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 588

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +N I+HG C     + AL+    +     K +  T NI++  L + G   +A   F ++ 
Sbjct: 589 YNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFS 648

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   +  TY  +  ++  +  LE+   L   ME+     D      I   L++ G + 
Sbjct: 649 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 708

Query: 448 EAQKFTSIMVE 458
            A  + S++ E
Sbjct: 709 RAGTYLSMIDE 719



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 233/504 (46%), Gaps = 26/504 (5%)

Query: 41  LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF 100
           + P   TY IL+   C+   L      +  + +     +  T+  L+ G C      +A 
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 101 RL-RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH---GIKPNAVTHNIM 156
            +  + M  L  +PDV +   L+    +  RS EA +L   + +    G  P+ V++  +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           I  + KEG   KA      M +   SPD VTY+++I A CK   M++A  ++  M + G+
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLL-----NSASKRGYYLDEVSYGTLITGYFRDEKA 271
             N  T  +I+H  C   +  EA   L     +     G   D  +Y TL+ GY      
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
                L D M    I P  + YN +I   ++ GK ++A+ + +++ Q G+ PD  T+  +
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C  G+VE A+ +  +M+++   P  +  N L+ GLC     E+A +     + +G 
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            ++++ +N++I S CKE R+ ++  L   M    + PD  TY+ +      +G+++EA K
Sbjct: 443 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 502

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             S MV  G                 + P++++Y   IN +C   R  DAL +F+E    
Sbjct: 503 LLSGMVSVG-----------------LKPNTVTYRTLINGYCKISRMGDALVLFKEMESS 545

Query: 512 GIAINKSTYMNLMNGLIKRRKSIS 535
           G++ +  TY  ++ GL + R++ +
Sbjct: 546 GVSPDIITYNIILQGLFQTRRTAA 569



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 215/448 (47%), Gaps = 1/448 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TY T+L     KG L  +  LL  M + G+ P+   YNIL+  Y K G + EA
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M Q    PD  TY  +I   C +G +E+A    ++M    L P  + YN+LI+ 
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                +   A +LI E+ + GI  N +  N +I  +CKEG++ ++ K+   M   G  PD
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY+TLID  C AG M+EA +++  M   GLK NT+T  T+++  C   ++ +A +L  
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFK 540

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D ++Y  ++ G F+  +   A +L+  + E        TYN ++ GL ++ 
Sbjct: 541 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 600

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T+ A+ M   L    +  +  TFN +I      G+  +A             P+  T  
Sbjct: 601 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYR 660

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++   +  +G+LE+  + F S    G  VDS   N ++  L +   +  A   LS ++EK
Sbjct: 661 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 720

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKF 452
               +  T A++   L+  G+ +E  +F
Sbjct: 721 HFSLEAST-ASLFIDLLSGGKYQEYHRF 747



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 26/251 (10%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           ++ P+  TY  +I    ++ + +     L  +++ G   +  TF  ++ G C++ +   A
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 345 LQF-HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF---FRSWILKGKAVDSVTYNT 400
           +     +M E S  PD+ +C ILL GLC E   ++AL+           G A D V+Y T
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTT 201

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +I+   KE     A+    EM ++++ PD  TY++I  AL +   +++A +  + MV+ G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK--- 517
                 V PN             +Y+  ++ +CS G+ K+A+   ++ R  G+  +    
Sbjct: 262 ------VMPNCR-----------TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEP 304

Query: 518 --STYMNLMNG 526
             +TY  L+ G
Sbjct: 305 DIATYCTLLQG 315


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 231/450 (51%), Gaps = 1/450 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E F C P    +  ++D L   G+      +   + ++G   +R  YN+L+  + + G L
Sbjct: 57  ESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQL 116

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             AM +   M    S PD +TY  L+N    AG ++EA      M    L P++ TYN L
Sbjct: 117 DSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLL 176

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++ F + G+   A  L  E+   G +P+ VT+NI++   C  G++  A K+   M  +G 
Sbjct: 177 MDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SPD  TY+TL++   K+G +EEA ++   M  +G+ ++ +  N++L TL     +D  + 
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L+   S++G++ D  S+ T++    +  K + A +++  M E    P   +YN +I   +
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G   QA  ML E++++G IP+  T+N++IH   ++GQV++A     +M     +PD+V
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+  L + G  ++A + F+    KG   D+++Y   I  L  + RL++A  L  +M
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLE-EAQ 450
           +      D+  Y  +  A   +G  E EAQ
Sbjct: 477 KAVGCPVDKAMYRILIRAAHRAGDTELEAQ 506



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 240/508 (47%), Gaps = 27/508 (5%)

Query: 24  GKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL---P 78
           G L+ +  LL +M  +G  L PN  T   L++ Y   G   ++    DL  Q +S    P
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPN--TLVKLITAY---GRGNKSGDAFDLFNQAESFACSP 63

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
            V  +  LI+   N+G  E A  + K++       D   YN LI  F  SG+   A ++ 
Sbjct: 64  TVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            E+   G +P+  T+  ++    K G++ +A      M E G +P+  TYN L+DA  K 
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKV 183

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G ++ A  +   M R+G + + +T N +L  LC   ++  A  L +  +  G   D  +Y
Sbjct: 184 GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTY 243

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TL+ G  +  +   A K++ EM +R +      YN+++  L+++G  ++   ++ E+ +
Sbjct: 244 STLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSR 303

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G  PD  +FNTI+       + + A +   +MVE   KPD+++ NIL+    R G   +
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A +     +  G   ++ TYN+LI  L  + ++++AF +L EME     PD  TY  +  
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L + G  + A +    M + G                 ++P ++SY+ +I+      R 
Sbjct: 424 MLGKRGENQRAARLFQQMKDKG-----------------VEPDTLSYAVRIDGLAFDDRL 466

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNG 526
            +AL +F++ +  G  ++K+ Y  L+  
Sbjct: 467 DEALVLFKDMKAVGCPVDKAMYRILIRA 494



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 211/439 (48%), Gaps = 3/439 (0%)

Query: 14  NTILDALFKKGKLN---EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           NT++  +   G+ N   +  DL +  +     P    +  L+      G  + A  V   
Sbjct: 31  NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + Q     D + YN+LI  +  +G L+ A  + +EM+     PD  TY  L+N   ++GR
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA    D + E G+ PN  T+N+++  + K G++D A  +   M+  GF P  VTYN 
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+DA C AG +  A ++   M   G   ++ T +T+++ L    +++EA+ +      RG
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             +D V+Y +L+    +    +R  KL  EM  +   P  F++N ++  L ++ K + A 
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++   +++SG  PD  ++N +I  +   G   +A Q   +MVE  F P+  T N L+  L
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
             +G +++A          G   D VTYN L+  L K    + A  L  +M++K + PD 
Sbjct: 391 ATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDT 450

Query: 431 YTYAAIHTALVESGRLEEA 449
            +YA     L    RL+EA
Sbjct: 451 LSYAVRIDGLAFDDRLDEA 469



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 184/354 (51%), Gaps = 3/354 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN ++DA  K G+L+    L ++MK++G  P+  TYNIL+   C  G +  A
Sbjct: 165 GLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAA 224

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   MT +   PD +TY+ L+NG   +G +EEA ++ +EM    +  D+V YN+L+  
Sbjct: 225 RKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLAT 284

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G     +KL+ E+   G  P+A + N ++    K  K D A ++   M E+G  PD
Sbjct: 285 LAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPD 344

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++YN LID+  + G+  +A +M++ M   G    T T N+++H L  + ++DEA+ +L 
Sbjct: 345 LISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLE 404

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D V+Y  L+    +  +  RA +L+ +MK++ + P T +Y   I GL+   
Sbjct: 405 EMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDD 464

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           + ++A+ +  ++   G   D+  +  +I      G  E   Q  +   E  F P
Sbjct: 465 RLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKH---ESQFMP 515



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 182/393 (46%), Gaps = 21/393 (5%)

Query: 137 LIDELDEHG--IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
           L+ E+   G  ++PN +    +I  Y +  K   A  +    E    SP    +  LID 
Sbjct: 17  LLKEMVAEGRPLRPNTLVK--LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDI 74

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
              +G  E A  +   + +KG +++    N ++       +LD A  +      +G   D
Sbjct: 75  LVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD 134

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
           E +YG L+    +  +   A   +D M ER + P+  TYN ++    + G+ + A+ +  
Sbjct: 135 EYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFA 194

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           E+ + G  P   T+N ++   CS G+V  A +  +KM      PD  T + L++GL + G
Sbjct: 195 EMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSG 254

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +E+A K FR  + +G AVD V YN+L+++L K   ++  + L+ EM  K   PD +++ 
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFN 314

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            I  AL ++ + + A++  + MVE+G                   P  ISY+  I+ +  
Sbjct: 315 TIMDALGKANKPDAAREVFARMVESG-----------------CKPDLISYNILIDSYAR 357

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            G    A Q+ EE  + G      TY +L++ L
Sbjct: 358 FGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 3/326 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYN +LDAL   G++   R L   M   G  P+  TY+ LV+G  K G ++EA
Sbjct: 200 GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEA 259

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V   M       D+  YN L+     AG ++  ++L KEM      PD  ++NT+++ 
Sbjct: 260 HKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA 319

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++ +   A ++   + E G KP+ +++NI+I  Y + G   +A +++  M E GF P+
Sbjct: 320 LGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPE 379

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN+LI      G ++EAF +++ M   G + + +T N ++  L    +   A  L  
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D +SY   I G   D++ + AL L+ +MK          Y  +I    ++G
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNT 330
            TE    + +E   S  +P E+   +
Sbjct: 500 DTELEAQLKHE---SQFMPVESRLTS 522



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 209/460 (45%), Gaps = 34/460 (7%)

Query: 94  GMLEEAFRLRKEM--ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
           G+L+    L KEM  E   L P+ +    LI  +    +S +AF L ++ +     P   
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVH 66

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
               +I      G+ ++A  + + + + G   D   YN LI    ++G ++ A  M   M
Sbjct: 67  AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KG + +  T   +++ L    ++ EA    ++  +RG   +  +Y  L+  + +  + 
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + AL L+ EMK R   PS  TYN ++  L  +G+   A  + +++   G  PD  T++T+
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           ++G    G+VE+A +   +MV++    D+V  N LL+ L + G +++  K  +    KG 
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D+ ++NT++ +L K  + + A  + + M E    PD  +Y  +  +    G   +A++
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQ 366

Query: 452 FTSIMVETGKINHQVVQPNTS---------KTPEEID---------------PSSISYSE 487
               MVE G I      P T           T  ++D               P  ++Y+ 
Sbjct: 367 MLEEMVEAGFI------PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++    +G  + A ++F++ + KG+  +  +Y   ++GL
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 17/294 (5%)

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           LD    LL      G  L   +   LIT Y R  K+  A  L+++ +     P+   +  
Sbjct: 11  LDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTK 70

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L  SG+ E+A  +  +L+Q G   D   +N +I  F   GQ++ A++   +M  K 
Sbjct: 71  LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +PD  T   L++ L + G +++A  FF + + +G   +  TYN L+ +  K  +L+ A 
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
           GL +EM+ +   P   TY  +  AL  +GR+  A+K    M   G               
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG--------------- 235

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               P S +YS  +N     GR ++A ++F E   +G+A++   Y +L+  L K
Sbjct: 236 --CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAK 287


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/594 (26%), Positives = 270/594 (45%), Gaps = 83/594 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  +  TY  ++  L K+G+++  R +L +M  +G+VP+  TYN ++ GYCK G +K+A
Sbjct: 190 GCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 249

Query: 65  MRVVDLMTQNKSLPDVWTYNMLI----------------------------------NGW 90
           + +  LM +N   PD WTYN+LI                                  NG+
Sbjct: 250 LGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGY 309

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C A  +++A R++  M S     D+  Y  LIN   +  R  EA + + E+  +G+ PN 
Sbjct: 310 CKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNV 369

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNME--------------------------------- 177
           V +  +I  YCK GK+  A ++ R ME                                 
Sbjct: 370 VIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 429

Query: 178 --ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
             E+G +P  +TY TLI   CK    + AFR+ ++M + GL  +    N + H LC   +
Sbjct: 430 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR 489

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
            +EAY  L    ++G  L +V+Y +L+ G+ +    + A  L ++M        ++TY+ 
Sbjct: 490 AEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSV 546

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++  L +  K  +A+ +L+++  SG+  +   +  II     EG+ + A    N+M+   
Sbjct: 547 LLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 606

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            KP   T  + +S  C+ G +E+A          G A D VTYN  I+       ++ AF
Sbjct: 607 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF 666

Query: 416 GLLSEMEEKKLGPDRYTY-----AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
             L  M +    P+ +TY       +  +LV++  ++ +  +  I ++T      V Q  
Sbjct: 667 STLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDT------VWQLL 720

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                  ++P++++YS  I   C   R ++A  +F+  R K I+ N+  Y  L+
Sbjct: 721 ERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLI 774



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 246/526 (46%), Gaps = 21/526 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  +  +Y  ++  L +   + E   LL  M + G   N  TY +L+ G CK G 
Sbjct: 151 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGR 210

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A RV++ M     +P VWTYN +I+G+C +G +++A  ++  ME     PD  TYN 
Sbjct: 211 IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNI 270

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA +L+++    G  P  +T   +I  YCK  +ID A ++  +M  + 
Sbjct: 271 LIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSN 329

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   Y  LI+   K    +EA   +  M   GL  N +   +I+   C   K+  A 
Sbjct: 330 CKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAAL 389

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G   +  +Y +LI G  +D+K ++A+ L  +M+E  I P   TY  +I G 
Sbjct: 390 EVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 449

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + + A  +   + Q+G+ PDE  +N + H  C  G+ E+A  F   +V K      
Sbjct: 450 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTK 506

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L+ G  + G  + A       + +G   DS TY+ L+ +LCK+++L +A  +L +
Sbjct: 507 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQ 566

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    +  +   Y  I + +++ G+ + A+   + M+ +G                   P
Sbjct: 567 MTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH-----------------KP 609

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           S+ +Y+  I+ +C  G+ ++A  +  E  + G+A +  TY   +NG
Sbjct: 610 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFING 655



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 226/513 (44%), Gaps = 54/513 (10%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D   Y  +++ L KK +  E ++ +S+M   GL PN   Y  ++ GYCK+G +  A+
Sbjct: 330 CKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAAL 389

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V  LM      P+ WTY+ LI G      L +A  L  +M+   + P V+TY TLI   
Sbjct: 390 EVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 449

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +      AF+L + ++++G+ P+   +N++    CK G+ ++A      +   G     
Sbjct: 450 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTK 506

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY +L+D   KAGN + A  +++ M  +G K ++ T + +L  LC +KKL+EA  +L+ 
Sbjct: 507 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQ 566

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            +  G   + V+Y  +I+   ++ K + A  +++EM      PS  TY   I    + G+
Sbjct: 567 MTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQ 626

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL-------------------- 345
            E+A  ++ E+ + G+ PD  T+N  I+G    G +++A                     
Sbjct: 627 IEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWI 686

Query: 346 -------------------------------QFHNKMVEKSFKPDIVTCNILLSGLCREG 374
                                          Q   +MV+    P  VT + +++G C+  
Sbjct: 687 LLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 746

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            LE+A   F     K  + +   Y  LI   C  +    A   +++M E    P   +Y 
Sbjct: 747 RLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYH 806

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            +   L + G  ++A+     ++     NH  V
Sbjct: 807 YLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEV 839



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 213/455 (46%), Gaps = 28/455 (6%)

Query: 102 LRKEMESLKLLP------DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           LRK    L ++P      +  +Y  LI    E+    EA  L+  + + G   N  T+ +
Sbjct: 141 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTL 200

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +IK  CKEG+I  A +++  M   G  P   TYN +ID  CK+G M++A  +  +M R G
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              +  T N +++ LC EK  DEA  LLN A  RG+    +++  +I GY + E+ + AL
Sbjct: 261 CNPDDWTYNILIYGLCGEKP-DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDAL 319

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           ++   M           Y  +I  L +  + ++A + ++E+  +G+ P+   + +II G+
Sbjct: 320 RVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGY 379

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G+V  AL+    M  +  +P+  T + L+ GL ++  L KA+         G     
Sbjct: 380 CKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 439

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           +TY TLI   CK+   ++AF L   ME+  L PD   Y  +  AL +SGR EEA  F   
Sbjct: 440 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF--- 496

Query: 456 MVETG----KINHQVVQPNTSKTP--------------EEIDPSSISYSEKINEHCSQGR 497
           +V  G    K+ +  +    SK                E     S +YS  +   C Q +
Sbjct: 497 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKK 556

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +AL I ++    G+  N   Y  +++ +IK  K
Sbjct: 557 LNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGK 591



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 221/490 (45%), Gaps = 59/490 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  TY++++  L +  KL++   L++ M++ G+ P   TY  L+ G CK   
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA--FRLRKEMESLKLLPDVVTY 118
              A R+ ++M QN   PD   YN+L +  C +G  EEA  F +RK +   K     VTY
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTK-----VTY 509

Query: 119 NTLINRFFESGRS-----------------------------------MEAFKLIDELDE 143
            +L++ F ++G +                                    EA  ++D++  
Sbjct: 510 TSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTL 569

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+K N V + I+I    KEGK D A  +   M  +G  P   TY   I + CK G +EE
Sbjct: 570 SGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEE 629

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY----MLLNSASKRGYY-----LD 254
           A  ++  M R G+  + +T N  ++       +D A+     +++++ +  Y+     L 
Sbjct: 630 AEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLK 689

Query: 255 EVSYGTLITGYFRDEKA-------NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                +L+  ++ D          +   +L + M +  + P+  TY+++I G  ++ + E
Sbjct: 690 HFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLE 749

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  + + +    + P+E  +  +I   C      KA+ F   M+E  F+P + + + L+
Sbjct: 750 EACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLI 809

Query: 368 SGLCREGILEKALKFFRSWI-LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
            GLC EG  +KA   F   + ++    + V +  L   L K   ++    LLS ME +  
Sbjct: 810 VGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHC 869

Query: 427 GPDRYTYAAI 436
             D  TY+ +
Sbjct: 870 QIDSETYSMV 879



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 170/370 (45%), Gaps = 18/370 (4%)

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           G + KAC ++  M   G   +  +Y  LI   C+   + EA  ++ +M + G  +N  T 
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
             ++  LC E ++  A  +L     RG      +Y  +I GY +  +   AL +   M+ 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
               P  +TYN +I+GL    K ++A ++LN+ +  G  P   TF  II+G+C   +++ 
Sbjct: 259 NGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL+    M+  + K D+    +L++ L ++   ++A +        G A + V Y ++I 
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
             CK  ++  A  +   ME +   P+ +TY+++   L++  +L +A    + M E G   
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG--- 434

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P  I+Y+  I   C +  + +A ++FE   Q G+  ++  Y  L
Sbjct: 435 --------------ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 480

Query: 524 MNGLIKRRKS 533
            + L K  ++
Sbjct: 481 THALCKSGRA 490


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 219/390 (56%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           +LD L K+G +   R L+ ++  +G+  N  TYN  + GY K   L     ++ LM +  
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
              +V TY +LI+G+ N G +EEA RL +EM    +  DV  Y ++I+    SG    A 
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L DE+ + G+ P+A T+  +I   CK G+++ A  +V  M+  G   + V +NTLID  
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C++G ++EA R+  VM +KGL+ +    N+I   LC   + DEA  LL S  +RG   + 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           +S+ TLI  Y ++     A +++ EM+E+  +P+  TYN +I G S+ G  ++A  + +E
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           L   G+IPD  T  ++IHG C +G+V+ AL+  ++M ++   P++VT   ++SGL ++G 
Sbjct: 531 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            E+A K +      G   D   Y++L+ SL
Sbjct: 591 SEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 192/366 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   + VTYN  ++  FK+  L  V ++L+ M+K+G+  N  TY +L+ G+  +G ++EA
Sbjct: 255 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA 314

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+ + M +     DV+ Y  +I+  C +G ++ A  L  EM    L+P   TY  LI+ 
Sbjct: 315 QRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHG 374

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G+   A  L++E+   GI  N V  N +I  YC+ G +D+A ++   ME+ G   D
Sbjct: 375 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESD 434

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN++    CK    +EA  ++  M  +G+  NT++  T++   C E    EA  +  
Sbjct: 435 VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFR 494

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + ++Y  LI GY +      A KL DE++ R ++P  +T  ++I G    G
Sbjct: 495 EMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDG 554

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A+ + +E+ Q G++P+  T+  +I G   +G+ E+A + +++M E    PD    +
Sbjct: 555 KVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYS 614

Query: 365 ILLSGL 370
            L+  L
Sbjct: 615 SLVGSL 620



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 220/435 (50%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
             E  +    M+K+G   +  +  + +    + G +   +R    M        V++  +
Sbjct: 171 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           +++G C  G +E   +L  E+ +  +  +VVTYN  I  +F+        +++  +++ G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           +  N VT+ ++I  +   GKI++A ++   M E G   D   Y ++I  NC++GN++ A 
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M  KGL  +  T   ++H +C   +++ A ML+N    +G  L+ V + TLI GY
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                 + AL+L   M+++ +    F YN++  GL +  + ++A  +L  +++ G+ P+ 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            +F T+I  +C EG   +A +   +M EK   P+I+T N+L+ G  + G +++A K    
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +G   D  T  +LI   C + +++ A  L  EM ++ L P+  TY A+ + L + GR
Sbjct: 531 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590

Query: 446 LEEAQKFTSIMVETG 460
            EEA K    M ETG
Sbjct: 591 SEEAFKLYDEMKETG 605



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 185/331 (55%), Gaps = 2/331 (0%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EG  C  + VTY  ++      GK+ E + L  +M+++G+  +   Y  ++S  C+ G +
Sbjct: 289 EGVAC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           K A+ + D MT    +P   TY  LI+G C AG +E A  L  EM+   +  + V +NTL
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 406

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ + ESG   EA +L   +++ G++ +   +N +    CK  + D+A  ++ +M E G 
Sbjct: 407 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 466

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           SP+ +++ TLID  CK GN  EA R+   M  KG   N IT N ++        + EA+ 
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +    RG   D  +  +LI G   D K + ALKL+DEM +R ++P+  TY AMI GLS
Sbjct: 527 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 586

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           + G++E+A  + +E+ ++G+ PD+T +++++
Sbjct: 587 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 217/443 (48%), Gaps = 6/443 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  +    L AL + G+++        M    +     +  I++ G CK G 
Sbjct: 181 MEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGD 240

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGW---CNAGMLEEAFRLRKEMESLKLLPDVVT 117
           ++   +++D +       +V TYN  I G+    + G + E   L   ME   +  +VVT
Sbjct: 241 VEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL---MEKEGVACNVVT 297

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  LI+ F   G+  EA +L +E+ E GI+ +   +  +I   C+ G + +A  +   M 
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  P   TY  LI   CKAG ME A  +++ M  KG+ +N +  NT++   C    +D
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  L     K+G   D  +Y ++ +G  +  + + A  L   M ER + P+T ++  +I
Sbjct: 418 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 477

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               + G   +A  +  E+ + G +P+  T+N +I G+   G +++A +  +++  +   
Sbjct: 478 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 537

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD+ TC  L+ G C +G ++ ALK F     +G   + VTY  +IS L K+ R E+AF L
Sbjct: 538 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 597

Query: 418 LSEMEEKKLGPDRYTYAAIHTAL 440
             EM+E  L PD   Y+++  +L
Sbjct: 598 YDEMKETGLTPDDTVYSSLVGSL 620



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 215/454 (47%), Gaps = 23/454 (5%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPD---VVTYNTLINRFFESGRSMEAFKLID 139
           +++L   + +  M  EA    + ME      D    + Y   + R  +    +  F+ + 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
            LD   ++    +  I++   CK G ++   K++  +   G   + VTYN  I+   K  
Sbjct: 218 NLD---VEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 274

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           ++     ++ +M ++G+  N +T   ++H      K++EA  L     ++G   D   Y 
Sbjct: 275 DLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 334

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           ++I+   R     RAL L+DEM ++ ++PS  TY A+I G+ ++G+ E A  ++NE+   
Sbjct: 335 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 394

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+  +   FNT+I G+C  G V++AL+    M +K  + D+   N + SGLC+    ++A
Sbjct: 395 GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                S + +G + +++++ TLI   CKE    +A  +  EMEEK   P+  TY  +   
Sbjct: 455 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 514

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             + G ++EA K    +   G I                 P   + +  I+  C  G+  
Sbjct: 515 YSKRGNMKEAHKLKDELENRGLI-----------------PDVYTCTSLIHGECIDGKVD 557

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            AL++F+E  Q+G+  N  TY  +++GL K  +S
Sbjct: 558 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 137/352 (38%), Gaps = 66/352 (18%)

Query: 218 MNTITLNTIL--HTLCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRA 274
           +N+ T++ IL  H L  E  LD  + +     ++ YY  ++ +Y TLI   +R  K+++ 
Sbjct: 52  LNSQTVHLILSNHILTAESCLDFFHFI-----RKNYYKPDLRAYITLIFKLYRSRKSDKL 106

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI--DMLNELLQSGMIPDETTFNTII 332
            K     + R +    F   A+  GL        ++  D  NE   +     E  F+ + 
Sbjct: 107 HKSQKFAEIRHL----FNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLF 162

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI----- 387
             +       +AL+    M +K F  D  +C + L  L R G ++  L+FFR  +     
Sbjct: 163 RVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVE 222

Query: 388 ------------------------------LKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
                                          KG   + VTYN  I    K   L     +
Sbjct: 223 VTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEI 282

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L+ ME++ +  +  TY  +       G++EEAQ+    M E G                 
Sbjct: 283 LTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG----------------- 325

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+     Y+  I+ +C  G  K AL +F+E   KG+  +  TY  L++G+ K
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 377


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/560 (29%), Positives = 263/560 (46%), Gaps = 38/560 (6%)

Query: 1   MEG-FGCLPDNVTYNTILDALFKK-GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           MEG FGC P    YN +L  L    G +     L + M   G +PNR TYN+L+ G CK 
Sbjct: 165 MEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKR 224

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G   +A+++ D M      P+V T+ +L++  CNAG L+EA  L   ME     PD VTY
Sbjct: 225 GTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTY 284

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT-HNIMIKWYCKEGKIDKACKI-VRNM 176
           N  ++   ++GR  EA + ++ L   G     +  ++ +I      G+ ++  +  +  +
Sbjct: 285 NAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 344

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           E+   SPD V Y  +I    +AG   +AF   D M  KG   +T   NT+L  LC    L
Sbjct: 345 EQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDL 404

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D A  L++   +    LD  +Y T+I G  +++  + A++++D M E    PS  TYN +
Sbjct: 405 DGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVL 464

Query: 297 IWGLSQSGKTEQAIDMLNEL-------------LQSGMIPDETTFNTIIHGFCSEGQVEK 343
           I GL ++ + E+A  +  ++             L +  + D  T   ++   C  GQV K
Sbjct: 465 IDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLK 524

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +    +++    PD+VT N LL+GLC+   L+ AL+ FR   +KG  +D +TY TLI 
Sbjct: 525 AYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLID 584

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA---------QKFTS 454
           SL +  R  DA  L  ++      P    Y ++  +L    +L +A         +K+  
Sbjct: 585 SLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNL 644

Query: 455 IM-----------VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           +             E G + H+ V+       E    +S  Y+  +      GR +DAL+
Sbjct: 645 LAQDEVISSARKKFEEGCL-HEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALK 703

Query: 504 IFEETRQKGIAINKSTYMNL 523
           IF    + GI I  +  ++L
Sbjct: 704 IFHILEESGIDITPACCVHL 723



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 243/527 (46%), Gaps = 37/527 (7%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM-TQNKSLPDVWTYNMLING 89
           D ++D +  GL P    +  L+  +   G   EA+     M  +    P  + YN ++  
Sbjct: 125 DAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRV 184

Query: 90  W-CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
              + G +  A  L   M +   LP+  TYN LI+   + G  ++A KL DE+   GI P
Sbjct: 185 LVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITP 244

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N  TH I++   C  G++ +A  ++ +ME+ G  PD VTYN  +   CKAG ++EA   +
Sbjct: 245 NVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERL 304

Query: 209 DVMGRKG-LKMNTITLNTILHTLCCEKKLDEAYML-LNSASKRGYYLDEVSYGTLITGYF 266
           + +   G   +     + ++  L    + +E +   +    +     D V Y  +I G  
Sbjct: 305 EALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCA 364

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
              + N A   +DEMKE+   P TF YN ++  L  +G  + A  +++E++++ ++ D  
Sbjct: 365 EAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIH 424

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK----- 381
           T+ T+I G C E  V++A+Q  + MVE    P ++T N+L+ GL R   LE+A       
Sbjct: 425 TYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM 484

Query: 382 --------FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
                   F R  +   +  DS T   L+ S+C+  ++  A+ LL  + +  + PD  TY
Sbjct: 485 EVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTY 544

Query: 434 AAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
             +   L +   L+ A + F  + V+   ++                   I+Y   I+  
Sbjct: 545 NTLLNGLCKVRNLDGALRLFRELQVKGFPLD------------------EITYGTLIDSL 586

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
               RY DAL +F++    G   +   Y ++M  L + +K +S+A++
Sbjct: 587 LRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQK-LSQAIN 632



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 222/589 (37%), Gaps = 156/589 (26%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GCLP+  TYN ++  L K+G   +   L  +M  +G+ PN  T+ IL+S  C  G 
Sbjct: 202 MVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQ 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR----LRKE----------- 105
           LKEA  ++  M      PD  TYN  ++G C AG ++EA      LR             
Sbjct: 262 LKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYS 321

Query: 106 ----------------------MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
                                 +E   + PD+V Y  +I    E+GR+ +AF   DE+ E
Sbjct: 322 CLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKE 381

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKA----CKIVRN------------------------ 175
            G  P+   +N ++K  C  G +D A     ++VRN                        
Sbjct: 382 KGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDE 441

Query: 176 -------MEENGFSPDCVTYNTLID---------------------------------AN 195
                  M E G  P  +TYN LID                                 AN
Sbjct: 442 AMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGAN 501

Query: 196 ---------------CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                          C++G + +A++++  +   G+  + +T NT+L+ LC  + LD A 
Sbjct: 502 QVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGAL 561

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +G+ LDE++YGTLI    R  + N AL L+ ++      PS   YN+M+  L
Sbjct: 562 RLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSL 621

Query: 301 SQSGKTEQAIDM--------LNELLQSGMIP----------------------------D 324
            +  K  QAI++         N L Q  +I                             +
Sbjct: 622 CRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVN 681

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +   + G    G++E AL+  + + E         C  L   LC EG L  A+    
Sbjct: 682 SCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVML 741

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             + KG  +     N L+ SLC   R +DA  L   M       D Y +
Sbjct: 742 YTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWRMHLVGYDMDAYLH 790


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 259/526 (49%), Gaps = 18/526 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ V+YNT++   F++G++++  +L  +M +QG+VP+  TY+  +   CK   + +A
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+  M  N   PD  TYN +I+G+   G  +E   + +EM    L+PD+ T N+ ++ 
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSS 341

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+S EA +  D +   G KP+ VT+++++  Y  EG +     +  +ME NG   D
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN LIDA  K G M+EA  +   M  +G+  +  T  T++       +L +A    N
Sbjct: 402 HSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFN 461

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI-MPSTFTYNAMIWGLSQS 303
                G   D + Y +LI G+       +A +L  EM  R I  P+T  +N++I  L + 
Sbjct: 462 QMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKE 521

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A D+ + ++  G  PD  TFN++I G+   G++EKA    + M+    +PD+VT 
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTY 581

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + LL G CR G ++  L  FR  + KG    ++TY  ++  L  + R   A  +  EM E
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
                D  T   I   L  +   +EA    ++  + G +N   V+ N +     ID    
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEA---IALFKKLGAMN---VKFNIAIINTMIDA--- 692

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            Y  +  E        +A ++F+     G+  N STY  ++  L+K
Sbjct: 693 MYKVRKRE--------EANELFDSISATGLVPNASTYGVMITNLLK 730



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 232/454 (51%), Gaps = 1/454 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTYN ++      G+  E   +  +M ++GL+P+  T N  +S  CK G  KEA   
Sbjct: 295 PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEF 354

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M      PD+ TY++L++G+   G + +   L   ME   ++ D   YN LI+ + +
Sbjct: 355 FDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGK 414

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   EA  +  ++ E G+ P+A T+  +I  + + G++  A      M   G  PD + 
Sbjct: 415 RGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIV 474

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGL-KMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           YN+LI   C  GN+ +A  ++  M  +G+ + NT+  N+I+++LC E ++ EA  + +  
Sbjct: 475 YNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLV 534

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   D +++ +LI GY    K  +A  + D M    I P   TY+A++ G  ++G+ 
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRI 594

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           +  + +  E+L  G+ P   T+  I+HG  ++G+   A +  ++M+E     DI TC I+
Sbjct: 595 DDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGII 654

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLCR    ++A+  F+         +    NT+I ++ K R+ E+A  L   +    L
Sbjct: 655 LGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGL 714

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            P+  TY  + T L++ G +EEA    S+M ++G
Sbjct: 715 VPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 255/535 (47%), Gaps = 27/535 (5%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP   TYN ++D   +  +      L     K GL  +    NIL+   C      +A+ 
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 67  VV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLIN 123
           V+   M +    PD  +Y+ ++   C     + A  L   M  +S    P+VV+YNT+I+
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            FF  G   +A  L  E+ + G+ P+ VT++  I   CK   +DKA  ++R M  NGF P
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTYN +I      G  +E   M   M R+GL  +  T N+ + +LC   K  EA    
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S + +G+  D V+Y  L+ GY  +      L L++ M+   I+     YN +I    + 
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKR 415

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  ++A+ +  ++ + G++PD  T+ T+I  F   G++  A+   N+M+    KPD +  
Sbjct: 416 GMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVY 475

Query: 364 NILLSGLCREGILEKALKFFRSWILKG-KAVDSVTYNTLISSLCKERRL---EDAFGLLS 419
           N L+ G C  G L KA +     + +G    ++V +N++I+SLCKE R+   +D F L+ 
Sbjct: 476 NSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVI 535

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            + E+   PD  T+ ++       G++E+A      M+  G                 I+
Sbjct: 536 HIGER---PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG-----------------IE 575

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           P  ++YS  ++ +C  GR  D L +F E   KG+     TY  +++GL    +++
Sbjct: 576 PDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTV 630



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 227/463 (49%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ--GLVPNRTTYNILVSGYCKL 58
           M   G  PD ++Y+T+L +L +  +     DLL  M K+  G  PN  +YN ++ G+ + 
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G + +A  +   M Q   +PDV TY+  I+  C A  +++A  + ++M S    PD VTY
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N +I+ +   G+  E   +  E+   G+ P+  T N  +   CK GK  +A +   +M  
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD VTY+ L+      G + +   + + M   G+  +    N ++        +DE
Sbjct: 361 KGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++     +RG   D  +YGT+I  + R  +   A+  +++M    + P T  YN++I 
Sbjct: 421 AMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ 480

Query: 299 GLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           G    G   +A ++++E++  G+  P+   FN+II+  C EG+V +A    + ++    +
Sbjct: 481 GFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGER 540

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD++T N L+ G    G +EKA     + I  G   D VTY+ L+   C+  R++D   L
Sbjct: 541 PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLIL 600

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM  K + P   TY  I   L   GR   A+K    M+E+G
Sbjct: 601 FREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 235/451 (52%), Gaps = 1/451 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  T N+ + +L K GK  E  +    M  +G  P+  TY++L+ GY   G++ + 
Sbjct: 327 GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDM 386

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M  N  + D   YN+LI+ +   GM++EA  +  +M+   ++PD  TY T+I  
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAA 446

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-P 183
           F   GR  +A    +++   G+KP+ + +N +I+ +C  G + KA +++  M   G   P
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRP 506

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V +N++I++ CK G + EA  + D++   G + + IT N+++       K+++A+ +L
Sbjct: 507 NTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVL 566

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           ++    G   D V+Y  L+ GY R+ + +  L L+ EM  + + P+T TY  ++ GL   
Sbjct: 567 DAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFND 626

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+T  A  M +E+++SG   D +T   I+ G C     ++A+    K+   + K +I   
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAII 686

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  + +    E+A + F S    G   ++ TY  +I++L KE  +E+A  + S ME+
Sbjct: 687 NTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEK 746

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
               P       I   L+E G + +A  + S
Sbjct: 747 SGCAPSSRLLNNIIRVLLEKGEISKAGNYLS 777



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 202/436 (46%), Gaps = 21/436 (4%)

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
           R+E      LP V TYN L++    + R    F L     + G+K + +  NI++K  C 
Sbjct: 107 REEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCH 166

Query: 163 EGKIDKACKI-VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMN 219
             + D A  + +  M E G  PD ++Y+T++ + C+    + A  ++  M +K  G   N
Sbjct: 167 AKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPN 226

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            ++ NT++H    E ++ +A  L +   ++G   D V+Y + I    +    ++A  +  
Sbjct: 227 VVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLR 286

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           +M      P   TYN MI G S  G+ ++   M  E+ + G++PD  T N+ +   C  G
Sbjct: 287 QMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHG 346

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           + ++A +F + M  K  KPD+VT ++LL G   EG +   L  F S    G   D   YN
Sbjct: 347 KSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYN 406

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI +  K   +++A  + ++M+E+ + PD +TY  +  A    GRL +A    + M+  
Sbjct: 407 ILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 + P +I Y+  I   C  G    A ++  E   +GI    + 
Sbjct: 467 G-----------------LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTV 509

Query: 520 YMN-LMNGLIKRRKSI 534
           + N ++N L K  + +
Sbjct: 510 FFNSIINSLCKEGRVV 525



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 214/422 (50%), Gaps = 1/422 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G + D+  YN ++DA  K+G ++E   + + M+++G++P+  TY  +++ + ++G 
Sbjct: 393 MEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-LPDVVTYN 119
           L +AM   + M      PD   YN LI G+C  G L +A  L  EM S  +  P+ V +N
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++IN   + GR +EA  + D +   G +P+ +T N +I  Y   GK++KA  ++  M   
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISV 572

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY+ L+D  C+ G +++   +   M  KG+K  TIT   ILH L  + +   A
Sbjct: 573 GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGA 632

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +   + G  +D  + G ++ G  R+   + A+ L+ ++    +  +    N MI  
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDA 692

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           + +  K E+A ++ + +  +G++P+ +T+  +I     EG VE+A    + M +    P 
Sbjct: 693 MYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPS 752

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
               N ++  L  +G + KA  +      K  ++++ T + ++S   ++ +  +    L 
Sbjct: 753 SRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLP 812

Query: 420 EM 421
            M
Sbjct: 813 AM 814


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 229/464 (49%), Gaps = 10/464 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + ++   N++L  L ++G  N + +L+  M +  + PN  T+ IL++  CK   
Sbjct: 296 MIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRR 355

Query: 61  LKEAMRVVDLMTQNKSL--------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-L 111
           + +A+ V++ M+  K          PDV  YN LI+G C  G  +E   L + M S K  
Sbjct: 356 VDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGC 415

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
            PD +TYN LI+ F ++G   +  +L DE+++ G+ PN VT N ++   C+ G++  A  
Sbjct: 416 APDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVN 475

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                +  G   D VTY  LI+A C   N E+A  + + M + G   + I   T++    
Sbjct: 476 FFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFS 535

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              ++ +A  +L    K G   D V Y TLI G+ R  K +R  ++  EM+E  + P T 
Sbjct: 536 QAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTI 595

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TYN +I   S++G  + A  ++ +++++G++P   T+  +I+ +C  G   +A++    M
Sbjct: 596 TYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDM 655

Query: 352 VEKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
              S   P+ V  NIL++ LC+   ++ A+       + G   ++ TYN +   L  E+ 
Sbjct: 656 KAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKD 715

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           LE  F  +  M E    PD  T   +   L   G +E  +KF +
Sbjct: 716 LEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVA 759



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 232/464 (50%), Gaps = 10/464 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L  +     ++  L +  K N   DL ++M K G V      N L++G  + G     
Sbjct: 265 GVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRM 324

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME--------SLKLLPDVV 116
             +++ M +    P+V T+ +LIN  C    +++A  + ++M         S+ + PDVV
Sbjct: 325 NELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVV 384

Query: 117 TYNTLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            YNTLI+   + GR  E   L++ +  + G  P+ +T+N +I  +CK G+I+K  ++   
Sbjct: 385 IYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDE 444

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M + G +P+ VT NTL+   C+ G +  A        R+G+K + +T   +++  C    
Sbjct: 445 MNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNN 504

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
            ++A  L N   K G   D + Y TLI+G+ +  +   A  +  E+K+  I P T  YN 
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT 564

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I G  ++ K  +  +ML E+ ++G+ PD  T+NT+I      G ++ A +   KM++  
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDA 414
             P + T   +++  C  G   +A++ F+      K   ++V YN LI+SLCK  +++ A
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             L+ +M+   + P+  TY AI   L +   LE+  +F   M+E
Sbjct: 685 VSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 236/540 (43%), Gaps = 70/540 (12%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ---------NKSLPDVW----------- 81
           V N    N+ +S   + G +K+A++V+D M +         N +  D+            
Sbjct: 187 VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNE 246

Query: 82  ----------------TYNMLINGWCNAGMLEEAFRLRK---------EMESLKLLPDVV 116
                            + +LI+ +    ++    R RK         EM  L  + +  
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESA 306

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
             N+L+      G      +L++++ E  I+PN VT  I+I   CK  ++D A +++  M
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM 366

Query: 177 ----EENGFS----PDCVTYNTLIDANCKAGNMEEAFRMMDVM-GRKGLKMNTITLNTIL 227
               E  G S    PD V YNTLID  CK G  +E   +M+ M  +KG   +TIT N ++
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
              C   ++++   L +  +K G   + V+  TL+ G  R  + + A+  + E + R + 
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
               TY A+I         E+A+++ NE+L+SG  PD   + T+I GF   G++  A   
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             ++ +   +PD V  N L+ G CR     +  +  +     G   D++TYNTLI+   K
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
              L+ A  ++ +M +  + P   TY A+  A   +G   EA +    M           
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDM----------- 655

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                K   ++ P+++ Y+  IN  C   + K A+ + E+ +  G+  N +TY  +  GL
Sbjct: 656 -----KAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL 710



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 207/486 (42%), Gaps = 70/486 (14%)

Query: 63  EAMRVVDLMTQNK-SLPDV-----WTYNMLIN-GWCNAGMLEEAFRLRKEMESLKLLPDV 115
           +A++ ++ +  N  S PD      +T+  +    +C         RL K  + L + P  
Sbjct: 98  QALKFLNYLQNNSPSSPDTQSLLSYTFQAIFELAFCEPDSNANLSRLYKTSKELNI-PLT 156

Query: 116 VTYNTLINRFFESGRSM---EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           V   + + R   SGRS    E+  L ++LD      N    N+ +    + G++  A K+
Sbjct: 157 VNAASFLLR--ASGRSELVEESLILFNDLDPS--VKNTYLRNVWLSILLRSGRVKDALKV 212

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  M E   S D        D+NC+           D  G        I  + +L     
Sbjct: 213 IDEMFE---SND--------DSNCRPN---------DATG-------DILFSFLLKRERN 245

Query: 233 EKKL--DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           E+ L  DE   L+    + G  +     G LIT   R+ K NR   L+ EM +   +  +
Sbjct: 246 EELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLES 305

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
              N+++ GL++ G   +  +++ ++++  + P+  TF  +I+  C   +V+ AL+   K
Sbjct: 306 AACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEK 365

Query: 351 M--------VEKSFKPDIVTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTL 401
           M        +  S +PD+V  N L+ GLC+ G  ++ L    R    KG A D++TYN L
Sbjct: 366 MSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCL 425

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I   CK   +E    L  EM ++ + P+  T   +   +  +GR+  A  F    VE  +
Sbjct: 426 IDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF---FVEAQR 482

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                           +   +++Y+  IN  C+   ++ A+++F E  + G + +   Y 
Sbjct: 483 --------------RGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYY 528

Query: 522 NLMNGL 527
            L++G 
Sbjct: 529 TLISGF 534



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 1/178 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TYNT++    K G L   + ++  M K G+VP   TY  +++ YC  G 
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
             EAM +  D+   +K  P+   YN+LIN  C    ++ A  L ++M+   + P+  TYN
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
            +     +     + F+ +D + EH   P+ +T  I+ +W    G+I++  K V   E
Sbjct: 705 AIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCE 762



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 137/324 (42%), Gaps = 41/324 (12%)

Query: 236 LDEAYMLLNS--ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ----IMPS 289
           ++E+ +L N    S +  YL  V    L+    R  +   ALK+ DEM E        P+
Sbjct: 173 VEESLILFNDLDPSVKNTYLRNVWLSILL----RSGRVKDALKVIDEMFESNDDSNCRPN 228

Query: 290 TFTYNAMIWGLSQSGKTEQAI---DMLNELL---QSGMIPDETTFNTIIHGFCSEGQVEK 343
             T + +   L +  + E+ +   +++N +L   + G++        +I   C   +  +
Sbjct: 229 DATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNR 288

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
                 +M++     +   CN LL+GL REG   +  +     +      + VT+  LI+
Sbjct: 289 GWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN 348

Query: 404 SLCKERRLEDAFGLLSEMEEKK--------LGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            +CK RR++DA  +L +M   K        + PD   Y  +   L + GR +E       
Sbjct: 349 HMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMER 408

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M                ++ +   P +I+Y+  I+  C  G  +   ++F+E  ++G+A 
Sbjct: 409 M----------------RSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAP 452

Query: 516 NKSTYMNLMNGLIKRRKSISKAVD 539
           N  T   L+ G+  R   +S AV+
Sbjct: 453 NVVTVNTLVGGMC-RTGRVSSAVN 475


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 264/540 (48%), Gaps = 30/540 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V++N+I+ +  K G ++  +     + K GLVP+  ++NIL++G C +G + EA+ +
Sbjct: 239 PSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 298

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M ++   PD  TYN+L+ G+   GM+  A  + ++M    L PDV+TY  L+    +
Sbjct: 299 ASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ 358

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVT-HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            G       L+ ++   G +  ++  +++M+   CK G++D+A  +  ++E  G +PD V
Sbjct: 359 LGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLV 418

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ +I   CK G  + A R+ D M  K +  N+ TL  I+  LC +  L EA  LL+S 
Sbjct: 419 AYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G  LD + Y  +I GY +      AL+L+    E  I P+  T+N++I+G  ++   
Sbjct: 479 ISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNI 538

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L+ +   G++P   ++ T++  + + G ++   +   +M  +   P  VT +++
Sbjct: 539 AEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598

Query: 367 LSGLC------------REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             GLC            RE ILEK     R    +G   D +TYNT+I  LC+ + L  A
Sbjct: 599 FKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRA 658

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           F L  +M+ + L P   TY  +  +L   G + +A +F                   S  
Sbjct: 659 FELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFL-----------------YSLQ 701

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              +  S  +Y+  I  HC +G  + A+ +F +   +G  ++   Y  ++N L +R  +I
Sbjct: 702 KRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAI 761



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 258/518 (49%), Gaps = 15/518 (2%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++L    +  K+ +V   + D        N  TY+ +V G C+   L++A+  +   
Sbjct: 180 SYNSVLYNFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 232

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V ++N +++ +C  G ++ A      +    L+P V ++N LIN     G  
Sbjct: 233 EWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 292

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +L  ++++HG++P++VT+NI++K +   G I  A +++++M + G SPD +TY  L
Sbjct: 293 AEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTIL 352

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +   C+ GN++    ++  M  +G ++ +I   + +L  LC   ++DEA  L       G
Sbjct: 353 LCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYG 412

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y  +I G  +  K + A++++DEM  ++I+P++ T  A++ GL Q G   +A 
Sbjct: 413 LTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEAR 472

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+ L+ SG   D   +N +I G+   G +E+AL+     +E    P++ T N L+ G 
Sbjct: 473 SLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGY 532

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A K      L G     V+Y TL+ +      ++    L  EM+ + + P  
Sbjct: 533 CKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTN 592

Query: 431 YTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
            TY+ I   L    +LE   Q     ++E  K NH V++   S   E I P  I+Y+  I
Sbjct: 593 VTYSVIFKGLCRGWKLENCNQVLRERILE--KFNH-VLRDMES---EGITPDQITYNTII 646

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              C       A ++F++ + + +    +TY  L++ L
Sbjct: 647 QYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSL 684



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 231/473 (48%), Gaps = 13/473 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+VTYN ++      G ++   +++ DM  +GL P+  TY IL+ G C+LG 
Sbjct: 302 MNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGN 361

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +   + ++ D++++   L  +  Y+++++G C  G ++EA  L  ++E+  L PD+V Y+
Sbjct: 362 IDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYS 421

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I+   + G+   A ++ DE+    I PN+ T   ++   C++G + +A  ++ ++  +
Sbjct: 422 IVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISS 481

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G + D + YN +ID   K+G +EEA  +  V    G+  N  T N++++  C  + + EA
Sbjct: 482 GDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEA 541

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L+     G     VSY TL+  Y          +L  EMK   I P+  TY+ +  G
Sbjct: 542 RKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKG 601

Query: 300 LSQSGKTEQAIDMLNELL------------QSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           L +  K E    +L E +              G+ PD+ T+NTII   C    + +A + 
Sbjct: 602 LCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFEL 661

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             KM  ++  P   T NIL+  LC  G + KA +F  S   +  ++    Y T+I + C 
Sbjct: 662 FKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCV 721

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +   E A  L +++ ++        Y+A+   L       E++ F  +M+  G
Sbjct: 722 KGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRG 774



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 195/396 (49%), Gaps = 12/396 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y+ +L  L K G+++E   L  D++  GL P+   Y+I++ G CKLG    A+RV D 
Sbjct: 383 IPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDE 442

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M   + LP+  T   ++ G C  GML EA  L   + S     D++ YN +I+ + +SG 
Sbjct: 443 MCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGC 502

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA +L     E GI PN  T N +I  YCK   I +A KI+  ++  G  P  V+Y T
Sbjct: 503 IEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTT 562

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------CEKKLDEAYM-- 241
           L+DA    G+++    +   M  +G+    +T + I   LC       C + L E  +  
Sbjct: 563 LMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEK 622

Query: 242 ---LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              +L      G   D+++Y T+I    R +  +RA +L+ +MK + + P++ TYN +I 
Sbjct: 623 FNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILID 682

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L   G   +A   L  L +  +   +  + T+I   C +G  E A+   N+++++ F  
Sbjct: 683 SLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNV 742

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            I   + +++ LCR  +  ++  FF   + +G + D
Sbjct: 743 SIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/486 (21%), Positives = 218/486 (44%), Gaps = 62/486 (12%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           VW  +ML+       M++E+  + K+M+   L     +YN+++  F E+ +  + +K I 
Sbjct: 145 VW--DMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIK 202

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           + +EH       T++ ++   C++ K++ A   +R  E     P  V++N+++ + CK G
Sbjct: 203 DKNEH-------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLG 255

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A      + + GL  +  + N +++ LC    + EA  L +  +K G   D V+Y 
Sbjct: 256 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 315

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFT--------------------------- 292
            L+ G+      + A ++  +M ++ + P   T                           
Sbjct: 316 ILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSR 375

Query: 293 ---------YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
                    Y+ M+ GL ++G+ ++A+ +  +L   G+ PD   ++ +IHG C  G+ + 
Sbjct: 376 GFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDM 435

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A++ +++M  K   P+  T   ++ GLC++G+L +A     S I  G  +D + YN +I 
Sbjct: 436 AVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVID 495

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
              K   +E+A  L     E  + P+  T+ ++     ++  + EA+K   ++   G + 
Sbjct: 496 GYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLV- 554

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                           PS +SY+  ++ + + G  K   ++  E + +GI     TY  +
Sbjct: 555 ----------------PSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598

Query: 524 MNGLIK 529
             GL +
Sbjct: 599 FKGLCR 604



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 2/159 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TYNTI+  L +   L+   +L   MK Q L P   TYNIL+   C  G 
Sbjct: 630 MESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGC 689

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +++A R +  L  +N SL   + Y  +I   C  G  E A  L  ++        +  Y+
Sbjct: 690 IRKADRFLYSLQKRNVSLSK-FAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYS 748

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
            +INR      ++E+      +   GI P+     +MIK
Sbjct: 749 AVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMIK 787


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 230/440 (52%), Gaps = 38/440 (8%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L AL K  +  E++ +  +M K+ + PN TT+NI ++G CK G L +A  V++ +  
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 74  NKSLPDVWTYNMLINGWC---NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
               P++ TYN LI+G C   +AG +  A  + KEM + K+ P+ +T+NTLI+ F +   
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            + A    +E+   G+KPN VT+N +I      GK+D+A  +   M   G  P+ VT+N 
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  CK   ++EA ++ D +  + L  N IT NT++   C    ++E + L NS    G
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            + +  +Y  LI G  R++    A KL +EM+  ++     TYN +I G  + G+  +A 
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAE 468

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L E+L  G+ P+  T+NT++ G+C EG ++ AL+   +M ++  + ++VT N+L+ G 
Sbjct: 469 KLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGF 528

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G LE                                   DA  LL+EM EK L P+R
Sbjct: 529 CKTGKLE-----------------------------------DANRLLNEMLEKGLNPNR 553

Query: 431 YTYAAIHTALVESGRLEEAQ 450
            TY  +   ++E G + + +
Sbjct: 554 TTYDVVRLEMLEKGFIPDIE 573



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 205/372 (55%), Gaps = 3/372 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR- 66
           P+  T+N  ++ L K GKLN+  D++ D+K  G  PN  TYN L+ G+CK G   +  R 
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257

Query: 67  --VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M  NK  P+  T+N LI+G+C    +  A    +EM+   L P++VTYN+LIN 
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G+  EA  L D++   G+KPN VT N +I  +CK+  I +A K+  ++ E    P+
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+NT+IDA CKAG MEE F + + M  +G+  N  T N ++  LC  + +  A  LLN
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLN 437

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                    D V+Y  LI G+ +D + ++A KL  EM    + P+  TYN ++ G    G
Sbjct: 438 EMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEG 497

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + A+ +  ++ + G   +  T+N +I GFC  G++E A +  N+M+EK   P+  T +
Sbjct: 498 NLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557

Query: 365 ILLSGLCREGIL 376
           ++   +  +G +
Sbjct: 558 VVRLEMLEKGFI 569



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 198/360 (55%), Gaps = 3/360 (0%)

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           KEM   ++ P++ T+N  IN   ++G+  +A  +I+++   G  PN VT+N +I  +CK+
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 164 G---KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           G   K+ +A  I++ M  N   P+ +T+NTLID  CK  N+  A    + M R+GLK N 
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +T N++++ L    KLDEA  L +     G   + V++  LI G+ + +    A KL+D+
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           + E+ ++P+  T+N MI    ++G  E+   + N +L  G+ P+ +T+N +I G C    
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQN 428

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           V  A +  N+M     K D+VT NIL+ G C++G   KA K     +  G   + VTYNT
Sbjct: 429 VRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNT 488

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+   C E  L+ A  + ++ME++    +  TY  +     ++G+LE+A +  + M+E G
Sbjct: 489 LMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG 548



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 200/405 (49%), Gaps = 20/405 (4%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N L++   +   + E   +  E+ +  I+PN  T NI I   CK GK++KA  ++ +++ 
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 179 NGFSPDCVTYNTLIDANCK---AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
            GFSP+ VTYNTLID +CK   AG M  A  ++  M    +  N IT NT++   C ++ 
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +  A        ++G   + V+Y +LI G   + K + A+ LWD+M    + P+  T+NA
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I G  +    ++A  + +++ +  ++P+  TFNT+I  FC  G +E+    HN M+++ 
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P++ T N L++GLCR   +  A K            D VTYN LI   CK+     A 
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAE 468

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL EM    + P+  TY  +       G L+ A K  + M + GK              
Sbjct: 469 KLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK-------------- 514

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                + ++Y+  I   C  G+ +DA ++  E  +KG+  N++TY
Sbjct: 515 ---RANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 191/363 (52%), Gaps = 19/363 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKK---GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           ++ +G  P+ VTYNT++D   KK   GK+     +L +M    + PN  T+N L+ G+CK
Sbjct: 226 IKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCK 285

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              +  A    + M +    P++ TYN LING  N G L+EA  L  +M  L L P++VT
Sbjct: 286 DENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVT 345

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +N LIN F +     EA KL D++ E  + PNA+T N MI  +CK G +++   +  +M 
Sbjct: 346 FNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSML 405

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G  P+  TYN LI   C+  N+  A ++++ M    LK + +T N ++   C + +  
Sbjct: 406 DEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS 465

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL      G   + V+Y TL+ GY  +     ALK+  +M++     +  TYN +I
Sbjct: 466 KAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLI 525

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  ++GK E A  +LNE+L+ G+ P+ TT++ +                  +M+EK F 
Sbjct: 526 KGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV----------------RLEMLEKGFI 569

Query: 358 PDI 360
           PDI
Sbjct: 570 PDI 572



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 204/428 (47%), Gaps = 57/428 (13%)

Query: 145 GIKP--NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--------------------- 181
           G +P  NA+  ++++  Y    +I  AC++ R +++ GF                     
Sbjct: 123 GDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETG 182

Query: 182 --------------SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
                          P+  T+N  I+  CKAG + +A  +++ +   G   N +T NT++
Sbjct: 183 EMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLI 242

Query: 228 HTLC---CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
              C      K+  A  +L          +E+++ TLI G+ +DE    A   ++EM+ +
Sbjct: 243 DGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ 302

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            + P+  TYN++I GLS +GK ++AI + ++++  G+ P+  TFN +I+GFC +  +++A
Sbjct: 303 GLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEA 362

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +  + + E+   P+ +T N ++   C+ G++E+      S + +G   +  TYN LI+ 
Sbjct: 363 RKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAG 422

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC+ + +  A  LL+EME  +L  D  TY  +     + G   +A+K    M+  G    
Sbjct: 423 LCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG---- 478

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        + P+ ++Y+  ++ +C +G  K AL++  +  ++G   N  TY  L+
Sbjct: 479 -------------VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLI 525

Query: 525 NGLIKRRK 532
            G  K  K
Sbjct: 526 KGFCKTGK 533


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 267/568 (47%), Gaps = 47/568 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN +L++  K+ ++  V  L  DM   G+ P   T+N+L+   C    +  A  +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M +    P+ +T+ +L+ G+C AG+ ++   L   MES  +LP+ V YNT+++ F  
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF----SP 183
            GR+ ++ K+++++ E G+ P+ VT N  I   CKEGK+  A +I  +ME + +     P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TYN ++   CK G +E+A  + + +       +  + N  L  L    K  EA  +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +G      SY  L+ G  +    + A  +   MK   + P   TY  ++ G    
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK + A  +L E++++  +P+  T N ++H     G++ +A +   KM EK +  D VTC
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAV-----------------------DSVTYNT 400
           NI++ GLC  G L+KA++  +   + G A                        D +TY+T
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----------- 449
           L++ LCK  R  +A  L +EM  +KL PD   Y        + G++  A           
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589

Query: 450 -----QKFTSIMVETGKINHQVVQPN---TSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
                + + S+++  G I +Q+ + +        + I P+  +Y+  I   C   + +DA
Sbjct: 590 CHKSLETYNSLILGLG-IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
             + +E  QK IA N  ++  L+    K
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIEAFCK 676



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 241/492 (48%), Gaps = 40/492 (8%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  L  L + GK  E   +L  M  +G+ P+  +YNIL+ G CKLG L +A  +V LM
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N   PD  TY  L++G+C+ G ++ A  L +EM     LP+  T N L++  ++ GR 
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-------------- 177
            EA +L+ +++E G   + VT NI++   C  G++DKA +IV+ M               
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507

Query: 178 ---------ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
                    EN   PD +TY+TL++  CKAG   EA  +   M  + L+ +++  N  +H
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C + K+  A+ +L    K+G +    +Y +LI G     +      L DEMKE+ I P
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN  I  L +  K E A ++L+E++Q  + P+  +F  +I  FC      K   F 
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC------KVPDF- 680

Query: 349 NKMVEKSFKPDIVTC-------NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             M ++ F+  +  C       +++ + L   G L KA +   + + +G  + +  Y  L
Sbjct: 681 -DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           + SLCK+  LE A G+L +M ++  G D      +   L + G  +EA  F   M+E   
Sbjct: 740 VESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799

Query: 462 INHQV--VQPNT 471
           +      V PN 
Sbjct: 800 VGEVANKVDPNA 811



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 264/557 (47%), Gaps = 45/557 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG LP+ V YNTI+ +  ++G+ ++   ++  M+++GLVP+  T+N  +S  CK G 
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267

Query: 61  LKEAMRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
           + +A R+   M  ++ L    P+  TYN+++ G+C  G+LE+A  L + +     L  + 
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           +YN  +      G+ +EA  ++ ++ + GI P+  ++NI++   CK G +  A  IV  M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           + NG  PD VTY  L+   C  G ++ A  ++  M R     N  T N +LH+L    ++
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW------------------ 278
            EA  LL   +++GY LD V+   ++ G     + ++A+++                   
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507

Query: 279 -----DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
                D + E   +P   TY+ ++ GL ++G+  +A ++  E++   + PD   +N  IH
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            FC +G++  A +    M +K     + T N L+ GL  +  + +          KG + 
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +  TYNT I  LC+  ++EDA  LL EM +K + P+ +++  +  A  +    + AQ+  
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
              V        +                  YS   NE  + G+   A ++ E    +G 
Sbjct: 688 ETAVSICGQKEGL------------------YSLMFNELLAAGQLLKATELLEAVLDRGF 729

Query: 514 AINKSTYMNLMNGLIKR 530
            +    Y +L+  L K+
Sbjct: 730 ELGTFLYKDLVESLCKK 746



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 216/470 (45%), Gaps = 11/470 (2%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P V+ YN+L+        +E    L K+M    + P   T+N LI    +S     A +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            DE+ E G KPN  T  I+++ YCK G  DK  +++  ME  G  P+ V YNT++ + C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY----L 253
            G  +++ +M++ M  +GL  + +T N+ +  LC E K+ +A  + +      Y      
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + ++Y  ++ G+ +      A  L++ ++E   + S  +YN  + GL + GK  +A  +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            ++   G+ P   ++N ++ G C  G +  A      M      PD VT   LL G C  
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G ++ A    +  +      ++ T N L+ SL K  R+ +A  LL +M EK  G D  T 
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKI------NHQVVQPNTSKTPEEIDPSSISYSE 487
             I   L  SG L++A +    M   G        N  +   + S       P  I+YS 
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            +N  C  GR+ +A  +F E   + +  +   Y   ++   K+ K IS A
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK-ISSA 578



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 193/401 (48%), Gaps = 24/401 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY  +L      GK++  + LL +M +   +PN  T NIL+    K+G + EA
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
             ++  M +     D  T N++++G C +G L++A  + K M                  
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510

Query: 107 --ESL---KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
             +SL     LPD++TY+TL+N   ++GR  EA  L  E+    ++P++V +NI I  +C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K+GKI  A +++++ME+ G      TYN+LI        + E   +MD M  KG+  N  
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T NT +  LC  +K+++A  LL+   ++    +  S+  LI  + +    + A +++ E 
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ET 689

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
                      Y+ M   L  +G+  +A ++L  +L  G       +  ++   C + ++
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           E A    +KM+++ +  D      ++ GL + G  ++A  F
Sbjct: 750 EVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSF 790



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 39/353 (11%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           KP+   +N++++   KE +++    + ++M   G +P   T+N LI A C +  ++ A  
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           + D M  KG K N  T   ++   C     D+   LLN+    G   ++V Y T+++ + 
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI---- 322
           R+ + + + K+ ++M+E  ++P   T+N+ I  L + GK   A  + +++     +    
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 323 PDETTFNTIIHGFCSEGQVEKA---------------LQFHN------------------ 349
           P+  T+N ++ GFC  G +E A               LQ +N                  
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 350 --KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M +K   P I + NIL+ GLC+ G+L  A          G   D+VTY  L+   C 
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             +++ A  LL EM      P+ YT   +  +L + GR+ EA++    M E G
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 161/379 (42%), Gaps = 62/379 (16%)

Query: 156 MIKWYCKEGKIDKAC---KIVRN-MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           ++  + K   IDKA    ++VR+   EN   P    YN L+++  K   +E    +   M
Sbjct: 81  VVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSVYLYNLLLESCIKERRVEFVSWLYKDM 138

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              G+   T T N ++  LC    +D A                                
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAAR------------------------------- 167

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
               +L+DEM E+   P+ FT+  ++ G  ++G T++ +++LN +   G++P++  +NTI
Sbjct: 168 ----ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW----I 387
           +  FC EG+ + + +   KM E+   PDIVT N  +S LC+EG +  A + F        
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           L     +S+TYN ++   CK   LEDA  L   + E        +Y      LV  G+  
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA+     M + G                 I PS  SY+  ++  C  G   DA  I   
Sbjct: 344 EAETVLKQMTDKG-----------------IGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 508 TRQKGIAINKSTYMNLMNG 526
            ++ G+  +  TY  L++G
Sbjct: 387 MKRNGVCPDAVTYGCLLHG 405



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 155/317 (48%), Gaps = 17/317 (5%)

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           T T+  IL      +++ E + L+ S+S +   L   S  ++++ + +    ++A   + 
Sbjct: 42  TPTIARILVRAKMHEEIQELHNLILSSSIQKTKLS--SLLSVVSIFAKSNHIDKAFPQFQ 99

Query: 280 EMKER--QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            ++ R  +  PS + YN ++    +  + E    +  +++  G+ P   TFN +I   C 
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
              V+ A +  ++M EK  KP+  T  IL+ G C+ G+ +K L+   +    G   + V 
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YNT++SS C+E R +D+  ++ +M E+ L PD  T+ +  +AL + G++ +A +  S M 
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM- 278

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
              +++  +  P          P+SI+Y+  +   C  G  +DA  +FE  R+     + 
Sbjct: 279 ---ELDEYLGLPR---------PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326

Query: 518 STYMNLMNGLIKRRKSI 534
            +Y   + GL++  K I
Sbjct: 327 QSYNIWLQGLVRHGKFI 343



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 34/238 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+V YN  +    K+GK++    +L DM+K+G   +  TYN L+ G      + E   +
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI----- 122
           +D M +    P++ TYN  I   C    +E+A  L  EM    + P+V ++  LI     
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676

Query: 123 -----------------------------NRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
                                        N    +G+ ++A +L++ + + G +     +
Sbjct: 677 VPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLY 736

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             +++  CK+ +++ A  I+  M + G+  D      +ID   K GN +EA    D M
Sbjct: 737 KDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 261/527 (49%), Gaps = 19/527 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC P   ++N++L+A  +  +  E     +  +  G+ PN  TYNIL+   CK    ++
Sbjct: 108 FGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEK 167

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              ++  M +N   PD+ +Y  LIN    +G L +A  L  EM    + PDV+ YN LI+
Sbjct: 168 GKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILID 227

Query: 124 RFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
            F   G  ++A ++    L E  + P+  T+NIMI   CK GK+D++ ++   M++N  S
Sbjct: 228 GFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKS 287

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  T++++I    KAGN   A ++   M   GL  +  T N +L  L    KL++ + L
Sbjct: 288 PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL 347

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N  SK     + VSY  LI G   ++K  +A+  W  + ER +   + TY  +I GL +
Sbjct: 348 WNVMSKNN-CCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCK 406

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G   +A+ +L E    G   D   +++++HG C +G +E+A++  ++M +   K +   
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHV 466

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L++G  R   LE+A+   R    K  A   V+YNT+I+ LCK  R  DA+  L EM 
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML 526

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E+ L PD  TY+ +   L    +++ A              HQ +        + + P  
Sbjct: 527 EEGLKPDMITYSLLIDGLCRGEKVDMALNLW----------HQCIN-------KRLKPDL 569

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             ++  I+  C+  +   AL+IF + RQ     +  T+  +M GL K
Sbjct: 570 QMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYK 616



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 272/536 (50%), Gaps = 19/536 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD ++Y T+++AL K G L +  +L  +M  +G+ P+   YNIL+ G+ + G   +A
Sbjct: 179 GLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKA 238

Query: 65  MRVVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             +   L+T++   P V TYN++ING C  G L+E+  +   M+  +  PD+ T++++I+
Sbjct: 239 NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIH 298

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G    A K+  E+ E G+ P+  T+N M+    + GK++K  ++   M +N    
Sbjct: 299 GLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC- 357

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V+YN LI        +E+A     ++  +GLK ++ T   +++ LC    L++A  +L
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRIL 417

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             A   G  LD  +Y +++ G  +     +A++L  +MK+ +   ++  +N++I G  ++
Sbjct: 418 EEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRA 477

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K E+AI +L E+      P   ++NTII+G C   +   A     +M+E+  KPD++T 
Sbjct: 478 FKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITY 537

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           ++L+ GLCR   ++ AL  +   I K    D   +N +I  LC  ++++ A  + ++M +
Sbjct: 538 SLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQ 597

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               PD  T+  I   L ++G   EA K    ++E G                 + P  I
Sbjct: 598 VNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG-----------------LQPDII 640

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           SY+      CS  R  DA++   +   +GI  N  T+  L+  ++  +  +  A++
Sbjct: 641 SYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYALN 696



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 240/491 (48%), Gaps = 29/491 (5%)

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINR 124
           R+VDLM   +           I  +    M ++A  L + M +     P + ++N+++N 
Sbjct: 64  RIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNA 123

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ES +  EA          G+ PN  T+NI+IK  CK+ + +K   ++  M ENG +PD
Sbjct: 124 FIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPD 183

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++Y TLI+A  K+GN+ +A  + D M  +G+  + +  N ++      +K D  ++  N
Sbjct: 184 ILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFL--RKGD--FVKAN 239

Query: 245 SASKR-----GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
              KR       Y    +Y  +I G  +  K + ++++W+ MK+ +  P  FT+++MI G
Sbjct: 240 EIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHG 299

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           LS++G    A  +  E+++SG+ PD  T+N ++ G    G++ K  +  N M  K+   +
Sbjct: 300 LSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNCCN 358

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           IV+ N+L+ GL     +E+A+ +++    +G   DS TY  LI+ LCK   L  A  +L 
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET-GKINHQVVQP------NTS 472
           E E +    D + Y+++   L + G LE+A +    M +   K+N  V            
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF 478

Query: 473 KTPEEID-----------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           K  E I            P+ +SY+  IN  C   R+ DA    +E  ++G+  +  TY 
Sbjct: 479 KLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYS 538

Query: 522 NLMNGLIKRRK 532
            L++GL +  K
Sbjct: 539 LLIDGLCRGEK 549



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 110/194 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C P  V+YNTI++ L K  + ++    L +M ++GL P+  TY++L+ G C+   
Sbjct: 490 MKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK 549

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +       +  PD+  +N++I+G C A  ++ A  +  +M  +  +PD+VT+NT
Sbjct: 550 VDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNT 609

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++   +++G  +EA K+ D + E G++P+ +++NI  K  C   ++  A + + +  + G
Sbjct: 610 IMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRG 669

Query: 181 FSPDCVTYNTLIDA 194
             P+  T+N L+ A
Sbjct: 670 ILPNAPTWNVLVRA 683


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 225/433 (51%), Gaps = 10/433 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD   +NT+LDAL + G L  +  L + M+   + PN  TY ILV G CK G + +A+ V
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 68  VDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKE-MESLK-LLPDVVTYNTLIN 123
           +D M+  +S   PDV   N +++G C  G L++A +  +E M S+    P+ VTYN L +
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F  +G    A +L+ ++++  + PNAVT N ++   C  G++  A +  R  E+    P
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFR--EKRTVWP 312

Query: 184 DC----VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           +     VTY+TL+ A     N+  A  +   M  +G   + I   T++  L    +LD+A
Sbjct: 313 EARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDA 372

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + +  S  K G+ LD  +Y  LI G+ R ++ N A +L  EMKE  + P  +TYN ++ G
Sbjct: 373 WSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSG 432

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G      ++L +++  G  P   TF T+IHG+C  GQ+++AL+    M E   +P+
Sbjct: 433 LCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPN 492

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            V  N L+  LC+      A++ F     K    +  T+N L+  L  +   E AF L+ 
Sbjct: 493 TVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMD 552

Query: 420 EMEEKKLGPDRYT 432
            M E +  PD  T
Sbjct: 553 LMREGRCTPDYVT 565



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 210/439 (47%), Gaps = 8/439 (1%)

Query: 27  NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNML 86
           +  R L   +      P+ + +N L+    + G L    ++   M      P+V TY +L
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 87  INGWCNAGMLEEAFRLRKEMESLK--LLPDVVTYNTLINRFFESGRSMEAFKLIDEL--D 142
           + G C AG + +A  +   M   +  + PDVV  N +++   ++GR  +A K ++E    
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC---KAG 199
            HG  PN VT+N +   +C+ G +  AC++V  ME+   +P+ VT NT++   C   + G
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
              E FR    +  +  + N +T +T++        +  A  L +     G   D + Y 
Sbjct: 299 AALEFFREKRTVWPEA-RGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYF 357

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T+I+G  +  + + A  +   MK+         YN +I G  +  +  +A ++L E+ ++
Sbjct: 358 TMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEA 417

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD  T+NT++ G C  G      +   KM++   +P +VT   L+ G C+ G +++A
Sbjct: 418 GLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEA 477

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
           L+ FRS    G   ++V YNTLI  LCK R    A  L  EM EK +  +  T+ A+   
Sbjct: 478 LRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKG 537

Query: 440 LVESGRLEEAQKFTSIMVE 458
           L +    E+A +   +M E
Sbjct: 538 LRDKNMPEKAFELMDLMRE 556



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 195/440 (44%), Gaps = 62/440 (14%)

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           LR  + +    PD   +NTL++   ++G      +L   + +  ++PN VT+ I++K  C
Sbjct: 124 LRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLC 183

Query: 162 KEGKIDKACKIVRNME--ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLK 217
           K G++  A  ++  M   E+   PD V  N ++D  CK G +++A + ++   R   G  
Sbjct: 184 KAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCA 243

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            NT+T N + H  C                                   R      A +L
Sbjct: 244 PNTVTYNCLAHAFC-----------------------------------RAGNVGMACEL 268

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE----TTFNTIIH 333
             +M++ ++ P+  T N ++ GL   G+   A++   E  +  + P+      T++T++ 
Sbjct: 269 VAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLVG 326

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            F     V  A++  ++MV++   PD +    ++SGL + G L+ A     S    G  +
Sbjct: 327 AFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQL 386

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D+  YN LI   C+ +RL +A+ LL EM+E  L PD YTY  + + L ++G      +  
Sbjct: 387 DAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELL 446

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M++ G                   PS +++   I+ +C  G+  +AL+IF    + GI
Sbjct: 447 GKMIDGG-----------------CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGI 489

Query: 514 AINKSTYMNLMNGLIKRRKS 533
             N   Y  L++ L K R +
Sbjct: 490 QPNTVIYNTLIDFLCKSRDT 509



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 177/351 (50%), Gaps = 14/351 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYN +  A  + G +    +L++ M+K+ + PN  T N +V G C   W+   
Sbjct: 241 GCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLC---WVGRV 297

Query: 65  MRVVDLMTQNKSLPDVW--------TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
              ++   + ++   VW        TY+ L+  + +   +  A  L  EM      PD +
Sbjct: 298 GAALEFFREKRT---VWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAI 354

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
            Y T+I+   ++GR  +A+ +   + + G + +A  +NI+I  +C+  ++++A +++  M
Sbjct: 355 MYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM 414

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +E G  PD  TYNTL+   CKAG+      ++  M   G + + +T  T++H  C   ++
Sbjct: 415 KEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQI 474

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  +  S  + G   + V Y TLI    +    + A++L+DEM+E+ +  +  T+NA+
Sbjct: 475 DEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNAL 534

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           + GL      E+A ++++ + +    PD  T + ++      G+ ++   F
Sbjct: 535 LKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHF 585



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 64/337 (18%)

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D A  L +S +      D  ++ TL+    +        +L+  M++  + P+  TY  +
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 297 IWGLSQSGKT-------------------------------------EQAIDMLNELLQS 319
           + GL ++G+                                      +QA+  + E ++S
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 320 --GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G  P+  T+N + H FC  G V  A +   KM ++   P+ VT N ++ GLC  G + 
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298

Query: 378 KALKFFRS----WI-LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            AL+FFR     W   +G A   VTY+TL+ +      +  A  L  EM ++   PD   
Sbjct: 299 AALEFFREKRTVWPEARGNA---VTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIM 355

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  + + L ++GRL++A    + M + G                ++D  + +Y+  I   
Sbjct: 356 YFTMISGLTQAGRLDDAWSMATSMKKAGF---------------QLD--AKAYNILIGGF 398

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           C + R  +A ++  E ++ G+  +  TY  L++GL K
Sbjct: 399 CRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCK 435



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 86/168 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  TYNT+L  L K G    V +LL  M   G  P+  T+  L+ GYCK+G 
Sbjct: 414 MKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQ 473

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+R+   M ++   P+   YN LI+  C +     A  L  EM    +  +V T+N 
Sbjct: 474 IDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNA 533

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
           L+    +     +AF+L+D + E    P+ VT +I+++W    G+ D+
Sbjct: 534 LLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR 581



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 29/277 (10%)

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL---SQSGKTEQAIDMLN 314
           Y  L   Y   + A+ AL        R   PS    +A+++ +   S S   + A  + +
Sbjct: 67  YSLLAAPYHGFDPASLALLFSLPSCHRLPPPSPRILSALLYKILSRSPSSSADAARFLRD 126

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            L      PD + FNT++      G +    Q    M + S +P++VT  IL+ GLC+ G
Sbjct: 127 SLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAG 186

Query: 375 ILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG--PDR 430
            +  AL            V  D V  N ++  LCK  RL+ A   + E      G  P+ 
Sbjct: 187 RVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNT 246

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  +  A   +G +  A +  + M +                 E + P++++ +  + 
Sbjct: 247 VTYNCLAHAFCRAGNVGMACELVAKMEK-----------------ERVTPNAVTLNTIVG 289

Query: 491 EHCSQGRYKDALQIFEETR-----QKGIAINKSTYMN 522
             C  GR   AL+ F E R      +G A+  ST + 
Sbjct: 290 GLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVG 326


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 248/528 (46%), Gaps = 22/528 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TYN+++    K+G+  E   +L++M  +GL P   +YN+ +    + G 
Sbjct: 241 MPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGR 300

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA+ V+  M      PDV +Y+  I      G  E +  L  EM    + P+ + +N+
Sbjct: 301 WKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNS 360

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I    + G+  +A +L+ E+   G+ P+A + N  I    K G+  +A ++++ M    
Sbjct: 361 AIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKR 420

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD ++YN+ I+A  K G  E A  +   M  KGL  N I+ N  +       +  E  
Sbjct: 421 LKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGL 480

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +G   + ++Y + I    +  +  +AL L  +MKE  + P + TYN+ I   
Sbjct: 481 ELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAAC 540

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+ ++A+ +L E+   G+ PD  ++   I  +   GQ E+A++   +M  K   P++
Sbjct: 541 SKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNV 600

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++    R G  EKAL   +       A D ++YN  IS+  K  R E+A  LL E
Sbjct: 601 ITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLRE 660

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  + L PD  +Y +   A    G  E+A    ++M   G                 + P
Sbjct: 661 MPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHG-----------------VSP 703

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           ++ SYS  I      GR ++A+ +  E  Q+G+     ++ N+ N LI
Sbjct: 704 TATSYSLAIEACGKGGRREEAVCLVREMAQRGL-----SHRNISNSLI 746



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 250/531 (47%), Gaps = 23/531 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLG--WLKEAMRVV 68
           +Y T +    ++G+  +  +LL ++ +Q G+ PN   YN  +   C  G  W + A+ ++
Sbjct: 146 SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEA-CGSGDQW-EIAVSLL 203

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M   + +PD  +YN  I      G  E    L +EM S+ L PD +TYN++I    + 
Sbjct: 204 REMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKE 263

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  EA  ++ E+   G+ P  +++N+ I+   + G+  +A +++R ME  G +PD ++Y
Sbjct: 264 GQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISY 323

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           +  I A    G  E +  ++D M  +G+  NTI  N+ +       + ++A  LL   + 
Sbjct: 324 DAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTA 383

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D  S+ + I    +  +   AL+L  EM  +++ P   +YN+ I    + G+ E 
Sbjct: 384 LGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEM 443

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++  ++   G+ P+  + N  I      G+ ++ L+   +M  +   P+++T N  + 
Sbjct: 444 ALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIK 503

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
              + G  EKAL             DS+TYN+ I++  K  R ++A  LL EM  + L P
Sbjct: 504 TCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTP 563

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  +Y A   A  ++G+ E A +    M   G                 + P+ I+Y+  
Sbjct: 564 DVISYTAAIDAYGKNGQWERAVELLRQMPTKG-----------------LTPNVITYNSV 606

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           I      G ++ AL + +E ++  +A +  +Y NL      +R    +A+D
Sbjct: 607 IKACGRGGEWEKALDLLKELKETAVAPDLMSY-NLAISACGKRGRWEEALD 656


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 246/513 (47%), Gaps = 17/513 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD + Y+T++D  FK G L     L S    +G+  +   ++  +  Y K G 
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  V   M      P+V TY +LI G C  G + EAF +  ++    + P +VTY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G     F L +++ + G  P+ V + +++    K+G +  A +    M    
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + V +N+LID  C+    +EA ++  +MG  G+K +  T  T++     E +L+EA 
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     K G   D ++Y TLI  + +  K    L+L+D M+  +I       N +I  L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + E A    N L++  M PD  T+NT+I G+CS  ++++A +    +    F P+ 
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  IL+  LC+   ++ A++ F     KG   ++VTY  L+    K   +E +F L  E
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+EK + P   +Y+ I   L + GR++EA            I HQ +         ++ P
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEAT----------NIFHQAID-------AKLLP 774

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             ++Y+  I  +C  GR  +A  ++E   + G+
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 209/425 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY  ++  L + G++ E   +   + K+G+ P+  TY+ L+ G+CK G L+  
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + + M +    PDV  Y +L++G    G++  A R   +M    +  +VV +N+LI+ 
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +    R  EA K+   +  +GIKP+  T   +++    EG++++A  +   M + G  PD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + Y TLIDA CK        ++ D+M R  +  +    N ++H L    ++++A    N
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  +     D V+Y T+I GY    + + A ++++ +K     P+T T   +I  L ++ 
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + AI M + + + G  P+  T+  ++  F     +E + +   +M EK   P IV+ +
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I++ GLC+ G +++A   F   I      D V Y  LI   CK  RL +A  L   M   
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805

Query: 425 KLGPD 429
            + PD
Sbjct: 806 GVKPD 810



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/525 (24%), Positives = 241/525 (45%), Gaps = 22/525 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYN--ILVSGYCKLGWLKEA 64
           +P +  Y  +L++L    +++ + D    + + G+ P+  + +  +L + +CK G + +A
Sbjct: 179 IPQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKA 236

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +    L+ +      + + N ++ G  +   +E A RL   +      P+VVT+ TLIN 
Sbjct: 237 LDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G    AF L   +++ GI+P+ + ++ +I  Y K G +    K+       G   D
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V +++ ID   K+G++  A  +   M  +G+  N +T   ++  LC + ++ EA+ +  
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              KRG     V+Y +LI G+ +         L+++M +    P    Y  ++ GLS+ G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A+    ++L   +  +   FN++I G+C   + ++AL+    M     KPD+ T  
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++     EG LE+AL  F      G   D++ Y TLI + CK  +      L   M+  
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           K+  D      +   L +  R+E+A KF + ++E GK                ++P  ++
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE-GK----------------MEPDIVT 638

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I  +CS  R  +A +IFE  +      N  T   L++ L K
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 36/238 (15%)

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMV--------------EKSFKPDIVTCNILLSGL 370
           + +F TI H     G  + A +  ++M+              ++S   D+  C  L+   
Sbjct: 99  DPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADV--CKFLMECC 156

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G+++KAL+ F      G  +   +   +++SL    R++       ++    + P  
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216

Query: 431 YT-YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID---------- 479
            + +  +  AL   G + +A  F  +++E G     +V  N       +D          
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKGLSVDQIEVASRLLS 275

Query: 480 --------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   P+ +++   IN  C +G    A  +F+   Q+GI  +   Y  L++G  K
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 263/525 (50%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+V+Y +++  L K G+L+E  +L   M+ +  VP    YN ++ GY   G  + A
Sbjct: 282 GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENA 341

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++D + +   +P V ++N ++        ++EA  L + M+     P+  TYN +I+ 
Sbjct: 342 YKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDM 400

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G+  EA+ + DE++  G+ PN +T NIM+   CK  K + A ++     + G +P+
Sbjct: 401 LCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPN 460

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY +LID   K GN+++A+R+ + M   G   N +   +++       + ++ + +  
Sbjct: 461 SVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFK 520

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++RG   D     T +   F+     +   +++++K    +P   +Y+ +I GL+++G
Sbjct: 521 EMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAG 580

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +   + + + Q G   D   +N ++ GFC  G+++KA +   +M  K   P + T  
Sbjct: 581 QARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYG 640

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GL +   L++A   F     KG  ++ + Y++LI    K  R+++A+ +L EM +K
Sbjct: 641 SIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKK 700

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+ YT+ ++  ALV++  + EA      M E                  +  P++ +
Sbjct: 701 GLTPNVYTWNSLMDALVKAEEINEALICFQSMKEM-----------------KCSPNTYT 743

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           YS  IN  C   +Y  A   ++E +++G+  N  TY  ++ GL K
Sbjct: 744 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAK 788



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 263/525 (50%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V++N+IL  L KK K++E   L   MKK    PN +TYNI++   C  G ++EA
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M      P++ T N++++  C A   E A+ + +        P+ VTY +LI+ 
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A++L + + + G   N V +  +I+ +   G+ +   KI + M   G  PD
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG++E+   + + +   G   +  + + ++H L    +  E   + +
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +  ++G+ LD  +Y  ++ G+ +  K ++A ++ +EMK +++ P+  TY ++I GL++  
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     +M++K   P++ T N
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  L +   + +AL  F+S      + ++ TY+ LI+ LC+ ++   AF    EM+++
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 770

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY  +   L + G + +A      + E  K N                P + S
Sbjct: 771 GLVPNVVTYTTMIAGLAKVGNITDACS----LFERFKANGGT-------------PDAAS 813

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  I       R  +A  +FEETR KG  IN    ++L++ L K
Sbjct: 814 FNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNK 858



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 246/542 (45%), Gaps = 24/542 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL-VPNRTTYNILVSGYCKLGWLKEAM 65
           LP +  YN +L   F    L  +  +L +M   G  VPN    + LVS   +   L +A 
Sbjct: 112 LPAD-AYNAVLP--FLSHDLAAMEKVLEEMSVLGYGVPNPACAD-LVSALVRTRRLDDAE 167

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           RV+  M + K  P    Y +LI     A   E A  L ++M+ +     V  + TL+   
Sbjct: 168 RVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRAL 227

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              GR   A  L+DE+    ++P+ V +N+ I  + K G +D A K    ++  G  PD 
Sbjct: 228 AREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDD 287

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V+Y ++I   CKAG + EA  +   M  +         NT++       + + AY LL+ 
Sbjct: 288 VSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQ 347

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG     VS+ +++T   +  K + AL L++ MK +   P++ TYN +I  L  +GK
Sbjct: 348 LKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGK 406

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A  + +E+  +G+ P+  T N ++   C   + E A +      ++   P+ VT   
Sbjct: 407 VEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCS 466

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GL ++G ++ A + F + +  G   + V Y +LI +     R ED   +  EM  + 
Sbjct: 467 LIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI----NHQVVQPNTSKTPEEIDPS 481
             PD          + ++G +E+ +     +   G +    ++ ++    +K  +  + S
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586

Query: 482 SI--------------SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           SI              +Y+  ++  C  G+   A ++ EE + K +    +TY ++++GL
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646

Query: 528 IK 529
            K
Sbjct: 647 AK 648



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 161/363 (44%), Gaps = 24/363 (6%)

Query: 171 KIVRNMEENGF---SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           K++  M   G+   +P C     L+ A  +   +++A R++  M R   +        ++
Sbjct: 133 KVLEEMSVLGYGVPNPACAD---LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLI 189

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             +   ++ + A  LL    + GY +    + TL+    R+ +   AL L DE+K   + 
Sbjct: 190 GAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLE 249

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P    YN  I    ++G  + A    +EL   G+ PD+ ++ ++I   C  G++ +A + 
Sbjct: 250 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEEL 309

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M  +   P     N ++ G    G  E A K       +G     V++N++++ L K
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGK 369

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           +R++++A  L   M+ K   P+  TY  I   L  +G++EEA      M   G       
Sbjct: 370 KRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAG------- 421

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     + P+ ++ +  ++  C   +++ A ++FE   Q+G   N  TY +L++GL
Sbjct: 422 ----------LFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471

Query: 528 IKR 530
            K+
Sbjct: 472 GKK 474


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 279/614 (45%), Gaps = 86/614 (14%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N +L+++  +G L   + ++  MK   L PN  TYN ++  Y K G  K AM V+
Sbjct: 224 DVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVL 282

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M +N    DV+TYN++I+  C       A+ L K M    L PD  TYNTLI  FF+ 
Sbjct: 283 EDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDE 342

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-------------- 174
            + M A  + +E+   G+KP+  T+  +I  YC+ G ID+A +++               
Sbjct: 343 SKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTY 402

Query: 175 ----------------NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
                           NME+ G SPD  TY  L+   CK G++ +A   M  +      +
Sbjct: 403 SAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAI 462

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           +  TLN +L  +C    LDEA  L        +  D  +Y  L++G+ R  K   A+ L 
Sbjct: 463 DQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILL 522

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL--------------------- 317
             M E+ ++P   TY  ++ GL + G+ + A  +  E++                     
Sbjct: 523 QMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLK 582

Query: 318 ---------------QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
                          Q+ + P+  ++N ++HG   +G + +++  +  MV K  KP  VT
Sbjct: 583 AGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVT 642

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             +L+ GL + G++E A+KF    +L+G   D ++++ LI++  ++ R+ DA  L + M+
Sbjct: 643 YRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMK 702

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---KINHQVVQPNTS------- 472
              + P   TY+A+   L+    L+ +      MVE+G   K  H +   N         
Sbjct: 703 WLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDIN 762

Query: 473 ---KTPEE-----IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
              +  EE     I P+ ++ S  +      G+ ++ + +F    + G+    +T+  LM
Sbjct: 763 GAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLM 822

Query: 525 NGLIKRRKSISKAV 538
           +GL K  K IS A+
Sbjct: 823 HGLCKEAK-ISDAL 835



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 242/512 (47%), Gaps = 41/512 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +GC PD  TY  +L  L K G L + ++ +S +       ++ T N L+ G C  G 
Sbjct: 420 MEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGS 479

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ + + M     +PD+ TY +L++G+C  G +  A  L + M    L+PD+VTY  
Sbjct: 480 LDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTC 539

Query: 121 LINRFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           L+    + G+   A  L  E+  + G+  + + +N M+  Y K GK+ K    + +M +N
Sbjct: 540 LLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQN 599

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+  +YN L+  + K G++  +  +   M RKG+K   +T   ++  L     ++ A
Sbjct: 600 KVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIA 659

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
              L+     G Y D +S+  LI  +    + + AL+L++ MK   + PS+ TY+AMI G
Sbjct: 660 VKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMING 719

Query: 300 LSQSGKTEQAIDMLNELLQSGM-----------------------------------IPD 324
           L +    + + D+L ++++SG+                                   +P 
Sbjct: 720 LIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPA 779

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           E   ++I+ G    G+VE+ +     ++     P I T   L+ GLC+E  +  AL    
Sbjct: 780 EVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKS 839

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G  +D VTYN LI+ LCK + + DA  L  EM+ K L P+  TY  +  A+  +G
Sbjct: 840 LMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTG 899

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           R  E +K  + + + G     +V   T + PE
Sbjct: 900 RTLEGEKLLNDIEDRG-----LVPSYTDQCPE 926



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 204/453 (45%), Gaps = 59/453 (13%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA------------------------- 150
           + ++ L+N + +  R ++A   I  +D  G K +A                         
Sbjct: 156 LVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKE 215

Query: 151 ----------VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
                      T NI++   C EG +  A  ++  M+     P+ +TYNT++    K G 
Sbjct: 216 GLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGR 274

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
            + A  +++ M + G++ +  T N ++  LC  K+   AY+LL          DE +Y T
Sbjct: 275 FKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNT 334

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI G+F + K   A+ +++EM  + + PS  TY  +I G  ++G  ++A+ +L E+  +G
Sbjct: 335 LIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAG 394

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P E T++ +++     G V +A   ++ M +    PD+ T   LL GLC+ G L +A 
Sbjct: 395 VKPSEVTYSAMLN-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAK 449

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +F    +    A+D  T N L+  +C    L++A  L  +M      PD +TY  + +  
Sbjct: 450 EFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGF 509

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
              G++  A     +M+E G +                 P  ++Y+  +     +G+ K 
Sbjct: 510 CRKGKIVPAVILLQMMLEKGLV-----------------PDIVTYTCLLKGLIKEGQVKA 552

Query: 501 ALQIFEETRQK-GIAINKSTYMNLMNGLIKRRK 532
           A  +F+E   K G+  +   Y ++MNG +K  K
Sbjct: 553 ASYLFQEIICKEGMYADCIAYNSMMNGYLKAGK 585



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 18/281 (6%)

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + + +  L+  Y ++++   A      M       S    NA++  L + G+++     L
Sbjct: 154 NPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFL 213

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            E L      D TT N +++  C EG ++ A    +KM   S  P+++T N +L    ++
Sbjct: 214 KEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKK 272

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G  + A+         G   D  TYN +I  LCK +R   A+ LL  M    L PD  TY
Sbjct: 273 GRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTY 332

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +     +  ++  A    + M+  G                 + PS  +Y+  I+ +C
Sbjct: 333 NTLIKGFFDESKMMLAIHIFNEMLRQG-----------------LKPSLATYTTLIDGYC 375

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             G   +AL++  E +  G+  ++ TY  ++NG +    S+
Sbjct: 376 RNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSV 416



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 35/276 (12%)

Query: 274 ALKLWDEMKERQIMPS-TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI---------- 322
           ALK+   + +R  +   T  Y      L+Q+    QA+ +L  L  +G            
Sbjct: 87  ALKILSSIVQRSGLERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSAVFSSLLC 146

Query: 323 ------PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
                  +   F+ +++ +  E +V  A      M    FK     CN +L+ L   G  
Sbjct: 147 TISRCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGES 206

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +    F +  +++   +D  T N +++S+C E  L+ A  ++ +M+   L P+  TY  I
Sbjct: 207 KHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTI 265

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
               V+ GR + A      M + G                 ++    +Y+  I++ C   
Sbjct: 266 LHWYVKKGRFKAAMCVLEDMEKNG-----------------VEADVYTYNIMIDKLCKMK 308

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           R   A  + +  R   +A ++ TY  L+ G     K
Sbjct: 309 RSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESK 344


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 264/548 (48%), Gaps = 33/548 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + + V  +     L   GK ++  +++ +M  +G VP+ +TY+ ++   C    
Sbjct: 409 MLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASK 468

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  + + M +N  +P V+TY +LI+ +C AG++++A     EM      P+VVTY +
Sbjct: 469 VEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME--- 177
           LI+ + ++ +  +A KL + +   G KPN VT+  +I  +CK G+IDKAC+I   M+   
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 178 -------------ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
                         +  +P+ +TY  L+D  CKA  +EEA  ++D M   G + N I  +
Sbjct: 589 ESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++   C   KL+ A  +    S+RGY  +  +Y +LI   F++++ +  LK+  +M E 
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+   Y  MI GL + GKTE+A  ++ ++ + G  P+  T+  +I GF   G++E+ 
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L+ +  M  K   P+ +T  +L++  C  G+L++A +               +Y  +I  
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
               R    + GLL E+ E +  P    Y  +    +++GRLE            G +N 
Sbjct: 829 F--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLE------------GALN- 873

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
             +    S +P     +   Y+  I       +   A +++     K +    ST+++L+
Sbjct: 874 --LLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLI 931

Query: 525 NGLIKRRK 532
            GL +  K
Sbjct: 932 KGLTRVGK 939



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/601 (24%), Positives = 264/601 (43%), Gaps = 80/601 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG      TYN ++    +  KL+    +  +M   G   +  T        CK G 
Sbjct: 196 LKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGR 255

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+    L+ + + +PD   YN +++G C A + +EA  +   M S+  +P+VVTY  
Sbjct: 256 CGDAL---SLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRI 312

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++     G+     +++  +   G  PN    N ++  YCK      A K+ + M + G
Sbjct: 313 LLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG 372

Query: 181 FSPDCVTYNTLIDANCK------AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             P  + YN  I + C       +  +E A +    M   G+ +N + ++     LC   
Sbjct: 373 CQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAG 432

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD-EKANRALKLWDEMKERQIMPSTFTY 293
           K D+A+ ++     +G+  D+ +Y  +I G+  D  K  +A  L++EMK+  I+PS +TY
Sbjct: 433 KFDKAFEIICEMMSKGFVPDDSTYSKVI-GFLCDASKVEKAFLLFEEMKKNGIVPSVYTY 491

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH-------------------- 333
             +I    ++G  +QA +  +E+L+    P+  T+ ++IH                    
Sbjct: 492 TILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLL 551

Query: 334 ---------------GFCSEGQVEKALQFHNKM--------VEKSFK--------PDIVT 362
                          G C  GQ++KA Q + +M        ++  FK        P+I+T
Sbjct: 552 EGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIIT 611

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ GLC+   +E+A +   +  + G   + + Y+ LI   CK  +LE+A  +  +M 
Sbjct: 612 YGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMS 671

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN-------TSKTP 475
           E+   P+ YTY+++  +L +  RL+   K  S M+E     + V+  +         KT 
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTE 731

Query: 476 EEID-----------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           E              P+ I+Y+  I+     G+ +  L+++ +   KG A N  TY  L+
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI 791

Query: 525 N 525
           N
Sbjct: 792 N 792



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 201/399 (50%), Gaps = 26/399 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV------------------PNRT 46
           G  P+ VTY  ++D   K G++++   + + M  QG +                  PN  
Sbjct: 553 GSKPNVVTYTALIDGHCKAGQIDKACQIYARM--QGDIESSDIDMYFKLDDNDCETPNII 610

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           TY  LV G CK   ++EA  ++D M+ N   P+   Y+ LI+G+C  G LE A  +  +M
Sbjct: 611 TYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKM 670

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
                 P++ TY++LIN  F+  R     K++ ++ E+   PN V +  MI   CK GK 
Sbjct: 671 SERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKT 730

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           ++A +++  MEE G  P+ +TY  +ID   K G +E+   +   M  KG   N IT   +
Sbjct: 731 EEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVL 790

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++  C    LDEA+ LL+   K+ Y+   +S Y  +I G+ R+     ++ L DE+ E +
Sbjct: 791 INHCCSTGLLDEAHRLLDEM-KQTYWPRHISSYRKIIEGFNREFIT--SIGLLDELSENE 847

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPDETTFNTIIHGFCSEGQVEK 343
            +P    Y  +I    ++G+ E A+++L E+  S    + ++  + ++I       +V+K
Sbjct: 848 SVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDK 907

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           A + +  M+ K+  P++ T   L+ GL R G  ++AL+ 
Sbjct: 908 AFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/562 (21%), Positives = 223/562 (39%), Gaps = 113/562 (20%)

Query: 82  TYNMLINGWC----NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
            YN LI   C    N   +   F ++   +  +LL  ++  N LI +   +G    A + 
Sbjct: 135 VYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLL--NFLIQKCCRNGMWNVALEE 192

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--------------- 182
           +  L + G K +  T+N +I+ + +  K+D A  + R M  +GF                
Sbjct: 193 LGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCK 252

Query: 183 -----------------PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
                            PD V YN ++   C+A   +EA  ++D M       N +T   
Sbjct: 253 AGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRI 312

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +L     + +L     +L+     G Y +   + +L+  Y +    + A KL+ +M +  
Sbjct: 313 LLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG 372

Query: 286 IMPSTFTYNAMIWG-----------------------------------------LSQSG 304
             P    YN  I                                           L  +G
Sbjct: 373 CQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAG 432

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A +++ E++  G +PD++T++ +I   C   +VEKA     +M +    P + T  
Sbjct: 433 KFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYT 492

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+   C+ G++++A  +F   +      + VTY +LI +  K R++ DA  L   M  +
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE 552

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIM---VETGKINHQV-VQPNTSKTPEEI-- 478
              P+  TY A+     ++G++++A +  + M   +E+  I+    +  N  +TP  I  
Sbjct: 553 GSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITY 612

Query: 479 ----------------------------DPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                                       +P+ I Y   I+  C  G+ ++A ++F +  +
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
           +G   N  TY +L+N L K ++
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKR 694


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 237/446 (53%), Gaps = 1/446 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TY  +L+ L + G++ +  ++L+ + + G+ P++ +YNILV+ YC+ G +K+A+   
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M +    P+  T+N +I+ +C  G ++ A    + M    + P V TYN+LIN + + 
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G  +  F+ +DE+D+ GIKPN +++  +I   CK+ K+  A  ++ +M   G SP+   Y
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI+A+C    +++AFR  D M + G+    +T NT+++ L    ++ +A  L    + 
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D ++Y +LI+GY +     + L+L+D+MK   I P+  T++ +I+   + G    
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTM 623

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
              M  E+LQ  ++PD+  +N +I+ +  +G V KA+  H +MV++    D VT N L+ 
Sbjct: 624 D-KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLIL 682

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
              R+  + +          KG      TYN LI  LC  +    A+    EM E+ L  
Sbjct: 683 AYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLL 742

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTS 454
           +      + + L E G L EAQ  +S
Sbjct: 743 NVSMCYQLISGLREEGMLREAQIVSS 768



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 271/556 (48%), Gaps = 46/556 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y   + A      L++  +L+  M K G+ P+   YN+++ G CK+  +K+A
Sbjct: 152 GTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDA 211

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D M Q   +P+  TYN LI+G+C  G +EEA   ++ M+   +  ++VTYN+L+N 
Sbjct: 212 RKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNG 271

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAV----------------------------THNIM 156
              SGR  +A +++ E++  G  P                               T+ I+
Sbjct: 272 LCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCIL 331

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +   C+ G+I+KA +++  + ENG +P  ++YN L++A C+ G++++A    + M  +GL
Sbjct: 332 LNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGL 391

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + N IT NT++   C   ++D A   +    ++G      +Y +LI GY +     R  +
Sbjct: 392 EPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFE 451

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
             DEM +  I P+  +Y ++I  L +  K   A  +L +++  G+ P+   +N +I   C
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
           S  +++ A +F ++M++      +VT N L++GL R G ++KA   F     KG   D +
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI 571

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN+LIS   K    +    L  +M+   + P   T+  +  A  + G           +
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEG-----------V 620

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
           V   K+  +++Q        ++ P    Y+E I  +   G    A+ + ++   +G+  +
Sbjct: 621 VTMDKMFQEMLQM-------DLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCD 673

Query: 517 KSTYMNLMNGLIKRRK 532
           K TY +L+   ++ R+
Sbjct: 674 KVTYNSLILAYLRDRR 689



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 258/549 (46%), Gaps = 46/549 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+ VTYNT++D   K G + E       MK+Q +  N  TYN L++G C  G + +A  
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283

Query: 67  VVDLMTQNKSLP----------------------------DVWTYNMLINGWCNAGMLEE 98
           V+  M  +  LP                            D  TY +L+NG C  G +E+
Sbjct: 284 VLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           A  +  ++    + P  ++YN L+N + + G   +A    ++++E G++PN +T N +I 
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
            +C+ G++D A   VR M E G SP   TYN+LI+   + G+    F  +D M + G+K 
Sbjct: 404 KFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKP 463

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N I+  ++++ LC ++KL +A ++L     RG   +   Y  LI       K   A + +
Sbjct: 464 NVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFF 523

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           DEM +  I  +  TYN +I GL ++G+ ++A D+  ++   G  PD  T+N++I G+   
Sbjct: 524 DEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKS 583

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
              +K L+ ++KM     KP + T + L+    +EG++    K F+  +      D   Y
Sbjct: 584 VNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMD-KMFQEMLQMDLVPDQFVY 642

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           N +I S  ++  +  A  L  +M ++ +  D+ TY ++  A +   R+ E +     M  
Sbjct: 643 NEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKA 702

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G +                 P   +Y+  I   C    +  A   + E  ++G+ +N S
Sbjct: 703 KGLV-----------------PKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVS 745

Query: 519 TYMNLMNGL 527
               L++GL
Sbjct: 746 MCYQLISGL 754



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 242/511 (47%), Gaps = 38/511 (7%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
           L+E  DL S M+K G VP+  + N L+         ++ + V   +  + + PD   Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
            +        L++ F L K M    + P V  YN ++    +  R  +A KL DE+ +  
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + PN VT+N +I  YCK G I++A      M+E     + VTYN+L++  C +G +++A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 206 R-MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY------LDEVSY 258
             ++++ G   L    ++     H+              N A   G +      +DE +Y
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDHS--------------NGAGDDGLFDGKEIRIDERTY 328

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             L+ G  R  +  +A ++  ++ E  + PS  +YN ++    Q G  ++AI    ++ +
Sbjct: 329 CILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEE 388

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G+ P+  TFNT+I  FC  G+V+ A  +  +MVEK   P + T N L++G  ++G   +
Sbjct: 389 RGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVR 448

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
             +F       G   + ++Y +LI+ LCK+R+L DA  +L++M  + + P+   Y  +  
Sbjct: 449 CFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIE 508

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           A     +L++A +F   M+++G                 ID + ++Y+  IN     GR 
Sbjct: 509 ASCSLSKLKDAFRFFDEMIQSG-----------------IDATLVTYNTLINGLGRNGRV 551

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           K A  +F +   KG   +  TY +L++G  K
Sbjct: 552 KKAEDLFLQMAGKGCNPDVITYNSLISGYAK 582



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 189/410 (46%), Gaps = 36/410 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  ++YN +++A  ++G + +       M+++GL PNR T+N ++S +C+ G +  A
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              V  M +    P V TYN LING+   G     F    EM+   + P+V++Y +LIN 
Sbjct: 415 ETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINC 474

Query: 125 FFES--------------GRSM---------------------EAFKLIDELDEHGIKPN 149
             +               GR +                     +AF+  DE+ + GI   
Sbjct: 475 LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDAT 534

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+N +I    + G++ KA  +   M   G +PD +TYN+LI    K+ N ++   + D
Sbjct: 535 LVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYD 594

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G+K    T + +++  C ++ +     +     +     D+  Y  +I  Y  D 
Sbjct: 595 KMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDG 653

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
              +A+ L  +M ++ +     TYN++I    +  +  +   +++++   G++P   T+N
Sbjct: 654 NVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYN 713

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
            +I G C       A  ++ +MVE+    ++  C  L+SGL  EG+L +A
Sbjct: 714 ILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 203/459 (44%), Gaps = 59/459 (12%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L   + + G  P+  + N +++        +K   +  ++ ++G  PD V Y   +
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
            A     ++++ F +M  M + G+  +    N +L  LC  +++ +A  L +   +R   
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V+Y TLI GY +      AL   + MKE+ +  +  TYN+++ GL  SG+ + A ++
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284

Query: 313 LNELLQSGMIP----------------------------DETTFNTIIHGFCSEGQVEKA 344
           L E+  SG +P                            DE T+  +++G C  G++EKA
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKA 344

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +   K+VE    P  ++ NIL++  C+EG ++KA+        +G   + +T+NT+IS 
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISK 404

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            C+   ++ A   +  M EK + P   TY ++     + G      +F   M + G    
Sbjct: 405 FCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG---- 460

Query: 465 QVVQPNT----------SKTPEEID--------------PSSISYSEKINEHCSQGRYKD 500
             ++PN            K  + ID              P++  Y+  I   CS  + KD
Sbjct: 461 --IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKD 518

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           A + F+E  Q GI     TY  L+NGL  R   + KA D
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLINGL-GRNGRVKKAED 556



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 36/344 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ ++Y ++++ L K  KL +   +L+DM  +G+ PN   YN+L+   C L  
Sbjct: 456 MDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSK 515

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK+A R  D M Q+     + TYN LING    G +++A  L  +M      PDV+TYN+
Sbjct: 516 LKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNS 575

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + +S  + +  +L D++   GIKP   T + +I + C++  +    K+ + M +  
Sbjct: 576 LISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMDKMFQEMLQMD 634

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   YN +I +  + GN+ +A  +   M  +G+  + +T                  
Sbjct: 635 LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT------------------ 676

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                            Y +LI  Y RD + +    L D+MK + ++P   TYN +I GL
Sbjct: 677 -----------------YNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGL 719

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
                   A     E+++ G++ + +    +I G   EG + +A
Sbjct: 720 CDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 219/508 (43%), Gaps = 90/508 (17%)

Query: 83  YNMLINGWCNAGM--LEEAFRLRKEMESLKLLPDVVTYNTLIN--RFFESGR-SMEAFKL 137
           +N  I+ +C+  +   E   + +K ++ ++ L  +++    I   RF  S   +  AF  
Sbjct: 17  FNNSISFFCSQSLTLCESDPQYQKRLQKVQKLETLISRGRTITARRFLRSLLLTKTAFSS 76

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGK-IDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           + EL  H  KP   + N++  W C   K +D+A  +   M ++GF P             
Sbjct: 77  LSELHAHVSKP-FFSDNLL--WLCSVSKMLDEATDLYSTMRKDGFVP------------- 120

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
                                 +T ++N +L TL   +  ++   +       G   D V
Sbjct: 121 ----------------------STRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAV 158

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +YG  +      +  ++  +L   M +  + PS F YN ++ GL +  + + A  + +E+
Sbjct: 159 AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           +Q  M+P+  T+NT+I G+C  G +E+AL F  +M E++ + ++VT N LL+GLC  G +
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRV 278

Query: 377 EKALKF-------------FRSWILKGKA---------------VDSVTYNTLISSLCKE 408
           + A +              F S++    +               +D  TY  L++ LC+ 
Sbjct: 279 DDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRV 338

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINH 464
            R+E A  +L+++ E  + P + +Y  +  A  + G +++A   T  M E G    +I  
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF 398

Query: 465 QVVQPNTSKTPE--------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
             V     +T E               + P+  +Y+  IN +  +G +    +  +E  +
Sbjct: 399 NTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458

Query: 511 KGIAINKSTYMNLMNGLIKRRKSISKAV 538
            GI  N  +Y +L+N L K RK I   +
Sbjct: 459 AGIKPNVISYGSLINCLCKDRKLIDAEI 486



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 1/240 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYNT+++ L + G++ +  DL   M  +G  P+  TYN L+SGY K    ++ + + D 
Sbjct: 536 VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK 595

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P V T++ LI      G++    ++ +EM  + L+PD   YN +I  + E G 
Sbjct: 596 MKILGIKPTVGTFHPLIYACRKEGVVTMD-KMFQEMLQMDLVPDQFVYNEMIYSYAEDGN 654

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            M+A  L  ++ + G+  + VT+N +I  Y ++ ++ +   +V +M+  G  P   TYN 
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C   +   A+     M  +GL +N      ++  L  E  L EA ++ +  S  G
Sbjct: 715 LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGG 774



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD   YN ++ +  + G + +   L   M  QG+  ++ TYN L+  Y +   + E   
Sbjct: 636 VPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKH 695

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +VD M     +P V TYN+LI G C+      A+   +EM    LL +V     LI+   
Sbjct: 696 LVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLR 755

Query: 127 ESGRSMEAFKLIDELDEHGI 146
           E G   EA  +  EL   G+
Sbjct: 756 EEGMLREAQIVSSELSIGGL 775


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 261/550 (47%), Gaps = 24/550 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+P+  TY  ++      G L+    LL +MK  G   N   +  L+ G C  G + EA+
Sbjct: 53  CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEAL 112

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
                M ++ + PDV TY  L++  C AG  +EA  + +EM +    PD VT++TLI+  
Sbjct: 113 EHFRAMAKDCA-PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGL 171

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC-KEGKIDKACKIVRNMEENGFSPD 184
            + G   +AF++++++ + G+  +      +I+  C K   ++ A K++  +   GF+P 
Sbjct: 172 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 231

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + +N +I+  CKA +++ A+++++VM  KG   N  T   ++  LC   ++ EA  LL 
Sbjct: 232 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 291

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + V+Y T+I G  +  + + A +L+  M+ R   P+  T+N +I GL ++ 
Sbjct: 292 KMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 351

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK-PDIVTC 363
           + E+A  + + + ++G  PD  T+N++I G C   QV++A Q    + E      + VT 
Sbjct: 352 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 411

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + L  G    G +  A + F   + KG + D  TY +LI   CK  R  +   L+ EM  
Sbjct: 412 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 471

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH------------------- 464
           K   P   T +A+   L E    E A +    M   G  +                    
Sbjct: 472 KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDK 531

Query: 465 --QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
              V++    K   + +PSS +    +   C  G+  DA Q+  +  ++G A   S+Y  
Sbjct: 532 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNR 591

Query: 523 LMNGLIKRRK 532
           L++GL + ++
Sbjct: 592 LLSGLSRLQR 601



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 257/541 (47%), Gaps = 81/541 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL----------------------- 41
           GC PD VT++T++D L K G   +   +L D+ ++G+                       
Sbjct: 156 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 215

Query: 42  -------------VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
                         P    +N++++G+CK   L  A +++++M +   +P+V+T+ +LI 
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G C A  + EA +L ++M      P+VVTY+T+IN   + G+  +A++L   ++     P
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 335

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N VTHNI+I   CK  +I++A ++   M E G +PD +TYN+LID  CK+  ++EAF++ 
Sbjct: 336 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLF 395

Query: 209 DVMGRKGLK-MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
             +   G+   N +T +T+ H      ++ +A  + +    +G+  D  +Y +LI  Y +
Sbjct: 396 QTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCK 455

Query: 268 DEKA-----------------------------------NRALKLWDEMKERQIMPSTFT 292
             +A                                    RA++L+D M  R        
Sbjct: 456 TSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALI 515

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQS---GMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           YN ++ G++++ K ++A+ +L +++        P  +  + ++   C  G+ + A Q  +
Sbjct: 516 YNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLH 575

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           KM E+ F   + + N LLSGL R    ++A + F + +  G A +  T N +IS LC   
Sbjct: 576 KMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAA 635

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +++DA+ L+  M +    PD  T   +     +SGR + A+K    M E G      ++P
Sbjct: 636 KVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG------LEP 689

Query: 470 N 470
           N
Sbjct: 690 N 690



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 259/500 (51%), Gaps = 20/500 (4%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L  D  +  +  N  + N  +   C+L   +EA+ +         +P+ +TY +LI G+ 
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
           +AG L+ A +L +EM+S     + V + TL+    ++GR +EA +    + +    P+ +
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVM 127

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+  ++   CK GK D+A  ++R M   G +PD VT++TLID  CK G+ E+AFR+++ +
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 212 GRKGLKMNTITLNTILHTLCCE-KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            ++G+  +     TI+  LC +   ++ A  +L     +G+    + +  +I G+ + + 
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A KL + M E+  +P+ FT+  +I GL ++ +  +A  +L +++  G  P+  T++T
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I+G C +GQV+ A +    M  ++  P++VT NIL+ GLC+   +E+A + +      G
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL-GPDRYTYAAIHTALVESGRLEEA 449
            A D +TYN+LI  LCK  ++++AF L   + E  +   +  TY+ +       GR+ +A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            +  S++V+ G                   P   +Y+  I E+C   R  + +++ EE  
Sbjct: 428 CRIFSMLVDKG-----------------FSPDLATYTSLILEYCKTSRAVEVVELVEEMA 470

Query: 510 QKGIAINKSTYMNLMNGLIK 529
            KG     +T   ++ GL +
Sbjct: 471 SKGFPPRVNTLSAVLGGLFE 490



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 211/436 (48%), Gaps = 39/436 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P+  T+  ++  L K  ++ E + LL  M   G  PN  TY+ +++G CK G + +A
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDA 321

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +  LM +    P+V T+N+LI+G C A  +EEA +L   M      PD++TYN+LI+ 
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381

Query: 125 FFESGRSMEAFKLIDELDEHGIKP-NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             +S +  EAF+L   + E G+   NAVT++ +   Y   G++  AC+I   + + GFSP
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TY +LI   CK     E   +++ M  KG      TL+ +L  L      + A  L 
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 501

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM---KERQIMPSTFTYNAMIWGL 300
           +S + RG   D + Y  ++ G  R  K ++AL + +++   ++R+  PS+   +A++  L
Sbjct: 502 DSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESL 561

Query: 301 SQSGKTEQAIDMLNEL-----------------------------------LQSGMIPDE 325
            Q GKT+ A  +L+++                                   + +G  P+ 
Sbjct: 562 CQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEI 621

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           +T N +I   CS  +V+ A +   +M +    PDI TCN L+ G C+ G  + A K    
Sbjct: 622 STVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEE 681

Query: 386 WILKGKAVDSVTYNTL 401
               G   +  T++ L
Sbjct: 682 MTEAGLEPNDTTHDLL 697


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 264/549 (48%), Gaps = 33/549 (6%)

Query: 1   MEG-FGCLPDNVTYNTILDALFKKGKLNEVR-DLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           MEG FGC P    YN +L  L   G +  +   L + M   G +PNR TYN+L+ G CK 
Sbjct: 163 MEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKR 222

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G   +A+++ D M Q    P+V T+ +L++  CNAG L+EA  L   ME     PD VTY
Sbjct: 223 GTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTY 282

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT-HNIMIKWYCKEGKIDKACKI-VRNM 176
           N  ++   ++GR  EA + ++ L   G     +  ++ +I      G+ ++  +  +  +
Sbjct: 283 NAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 342

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           E+  FSPD V Y  +I    +AG +++AF   D M  K    +T   NT+L  LC    L
Sbjct: 343 EQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDL 402

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D A  L++  ++    LD  ++  +I G  + +  + A++++D M E    P+  TYN +
Sbjct: 403 DGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVL 462

Query: 297 IWGLSQSGKTEQAIDMLNEL-------------LQSGMIPDETTFNTIIHGFCSEGQVEK 343
           I GL ++ + E+A  +  ++             L +  + D  +   ++   C  GQV K
Sbjct: 463 IDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLK 522

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +    +++    PD+VT N LL+GLC+   L+ AL+ FR   +KG ++D +TY TLI 
Sbjct: 523 AYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLID 582

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           SL +  R  DA  L  ++      P    Y +I  +L    +L +A  F          +
Sbjct: 583 SLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFW--------FD 634

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
           H + + N S   E I  +   + E        G   +A++   +  Q+  ++N   Y   
Sbjct: 635 HLLKKYNLSAQDEVIASARKKFEE--------GSLDEAVRELIKIDQEYGSVNSCPYTIW 686

Query: 524 MNGLIKRRK 532
           + GLI+ R+
Sbjct: 687 LIGLIQARR 695



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 159/562 (28%), Positives = 263/562 (46%), Gaps = 48/562 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GCLP+  TYN ++D L K+G   +   L  +M ++G+ PN  T+ IL+S  C  G 
Sbjct: 200 MVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQ 259

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF-RLRKEMESLKLLPDVVTYN 119
           LKEA  +++ M      PD  TYN  ++G C AG ++EA  RL     +   +  +  Y+
Sbjct: 260 LKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYS 319

Query: 120 TLINRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            LI+  F +GR  E F+   E L++    P+ V + IMI+   + G+ID A      M+E
Sbjct: 320 CLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKE 379

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
             F+PD   YNTL+ A C +G+++ A  +M  M +  + ++T T   ++H LC ++ +DE
Sbjct: 380 KRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDE 439

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF------- 291
           A  + +   + G +   ++Y  LI G +R  +   A  L+ +M E    PS F       
Sbjct: 440 AMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGA 498

Query: 292 -------TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
                  +   ++  + QSG+  +A  +L  ++ SG++PD  T+NT+++G C    ++ A
Sbjct: 499 NQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGA 558

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L+   ++  K F  D +T   L+  L R      A+  F+  +  G       YN+++ S
Sbjct: 559 LRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRS 618

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV------ESGRLEEA-QKFTSIMV 457
           LC+  +L  A     +   KK     Y  +A    +       E G L+EA ++   I  
Sbjct: 619 LCRMNKLSQAINFWFDHLLKK-----YNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQ 673

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           E G +N                  S  Y+  +       R  DAL+IF    + GI I  
Sbjct: 674 EYGSVN------------------SCPYTIWLIGLIQARRIDDALKIFHILEESGIDITP 715

Query: 518 STYMNLMNGLIKRRKSISKAVD 539
           +   +L   L    K++  AVD
Sbjct: 716 ACCAHLSKYLCW-EKNLDSAVD 736



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 247/527 (46%), Gaps = 37/527 (7%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT-QNKSLPDVWTYNMLING 89
           D ++D +  GL P    +  L+  +   G   EA+     M  +    P  + YN ++  
Sbjct: 123 DAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRV 182

Query: 90  W-CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
              + G++  A  L   M +   LP+  TYN L++   + G +++A KL DE+ + GI P
Sbjct: 183 LVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITP 242

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N  TH I++   C  G++ +A  ++ +ME+ G  PD VTYN  +   CKAG ++EA   +
Sbjct: 243 NVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERL 302

Query: 209 DVMGRKG-LKMNTITLNTILHTLCCEKKLDEAYM-LLNSASKRGYYLDEVSYGTLITGYF 266
           + + R G   +     + ++  L    + +E +   +    +  +  D V Y  +I G  
Sbjct: 303 EALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCA 362

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
              + + A   +DEMKE++  P TF YN ++  L  SG  + A  +++E+ Q+ ++ D  
Sbjct: 363 EAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTN 422

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK----- 381
           T   +IHG C +  V++A+Q  + MVE    P ++T N+L+ GL R   LE+A       
Sbjct: 423 THTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM 482

Query: 382 --------FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
                   F R  +   +  DS +   L+ S+C+  ++  A+ LL  + +  + PD  TY
Sbjct: 483 EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTY 542

Query: 434 AAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
             +   L +   L+ A + F  + V+   ++                   I+Y   I+  
Sbjct: 543 NTLLNGLCKVRNLDGALRLFRELQVKGFSLD------------------EITYGTLIDSL 584

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
               RY DA+ +F++    G   + S Y ++M  L +  K +S+A++
Sbjct: 585 LRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNK-LSQAIN 630



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 224/504 (44%), Gaps = 51/504 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLG 59
           ME  GC PD VTYN  L  L K G+++E  + L  +++ G  V     Y+ L+ G    G
Sbjct: 270 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAG 329

Query: 60  WLKEAMRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             +E  +  ++++ Q    PD+  Y ++I G   AG +++AF    EM+  +  PD   Y
Sbjct: 330 RYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCY 389

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           NTL+    +SG    A  L+ E+ ++ +  +  TH IMI   CK+  +D+A ++   M E
Sbjct: 390 NTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVE 449

Query: 179 NGFSPDCVTYNTLID---------------------------------AN---------- 195
            G  P  +TYN LID                                 AN          
Sbjct: 450 VGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQK 509

Query: 196 -----CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
                C++G + +A++++  +   G+  + +T NT+L+ LC  + LD A  L      +G
Sbjct: 510 LVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG 569

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           + LDE++YGTLI    R  + N A+ L+ ++      PS   YN+++  L +  K  QAI
Sbjct: 570 FSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAI 629

Query: 311 DM-LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           +   + LL+   +  +            EG +++A++   K+ ++    +     I L G
Sbjct: 630 NFWFDHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIG 689

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           L +   ++ ALK F      G  +       L   LC E+ L+ A  ++     K+    
Sbjct: 690 LIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMS 749

Query: 430 RYTYAAIHTALVESGRLEEAQKFT 453
           R+    + ++L    R ++AQ   
Sbjct: 750 RHVGNRLLSSLCIRHRRKDAQALA 773


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/556 (28%), Positives = 277/556 (49%), Gaps = 40/556 (7%)

Query: 9   DNVTYNTILDALFKKGKL-------NEV------------RDLLSDMKKQGLVPNRTTYN 49
           D VTYNT+L A  K G L       NE+             D+++  + + L P   TY 
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYT 325

Query: 50  ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
            L++ YCK   ++E+  +   M  N  +PDV T + ++ G+C  G L EA  L +EM  +
Sbjct: 326 TLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEM 385

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
            L P+ V+Y T+IN  F+SGR MEAF L  ++   GI  + VT   ++    K GK  +A
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
            ++   + +   +P+CVTY+ L+D  CK G ME A  ++  M ++ +  N IT ++I++ 
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIING 505

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
              +  L +A  +L    +R    + + Y  LI GYF+  + + A     EMK R++  S
Sbjct: 506 YAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEES 565

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
              ++ ++  L + G+ ++A  ++ ++   G+ PD   + ++I G+  EG    AL    
Sbjct: 566 NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 625

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKE 408
           +M EK+ + D+V  N L+ GL R G  +   ++  S +++ G A D +TYNT+I++ C +
Sbjct: 626 EMKEKNIRFDVVAYNALIKGLLRLGKYDP--RYVCSRMIELGLAPDCITYNTIINTYCIK 683

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ------------------ 450
            + EDA  +L+EM+   + P+  TY  +   L ++G +E+A+                  
Sbjct: 684 GKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITH 743

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           KF        +   +++Q +       ++ S   Y+  I   C  G  + A  + +E  +
Sbjct: 744 KFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK 803

Query: 511 KGIAINKSTYMNLMNG 526
           +GI+ +  TY  L+ G
Sbjct: 804 RGISADLVTYNALIRG 819



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 280/558 (50%), Gaps = 38/558 (6%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           DNVTYNT++    +KG +++   LLS+M K+GL  +  T NILV GYC++G ++ A  V+
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             +       DV   N LI+G+C AG++ +A  L +      +  D+VTYNTL+  F ++
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280

Query: 129 GRSMEAFKLIDEL-----DEHGIK--------------PNAVTHNIMIKWYCKEGKIDKA 169
           G    A  L +E+     DE  +K              P  VT+  +I  YCK   ++++
Sbjct: 281 GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEES 340

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
             + + M  NG  PD VT ++++   C+ G + EA  +   M   GL  N ++  TI+++
Sbjct: 341 HSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINS 400

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           L    ++ EA+ L +    RG   D V+  T++ G F+  K   A ++++ + +  + P+
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TY+A++ G  + GK E A  +L ++ +  + P+  TF++II+G+  +G + KA+    
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +MV+++  P+ +   IL+ G  + G  + A  F +    +     +V ++ L+++L +  
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVG 580

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+++A  L+ +M  K + PD   YA++     + G    A      M E   I   VV  
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK-NIRFDVVAY 639

Query: 470 NT-----------------SKTPE-EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
           N                  S+  E  + P  I+Y+  IN +C +G+ +DAL I  E +  
Sbjct: 640 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSY 699

Query: 512 GIAINKSTYMNLMNGLIK 529
           GI  N  TY  L+ GL K
Sbjct: 700 GIMPNAVTYNILIGGLCK 717



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 251/523 (47%), Gaps = 18/523 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VT ++IL    + GKL E   L  +M + GL PN  +Y  +++   K G + EA
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M       D+ T   +++G    G  +EA  + + +  L L P+ VTY+ L++ 
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G+   A  ++ ++++  + PN +T + +I  Y K+G + KA  ++R M +    P+
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + Y  LID   KAG  + A      M  + L+ + +  + +L+ L    ++DEA  L+ 
Sbjct: 531 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 590

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D V+Y +LI GYF++     AL +  EMKE+ I      YNA+I GL + G
Sbjct: 591 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG 650

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K +    + + +++ G+ PD  T+NTII+ +C +G+ E AL   N+M      P+ VT N
Sbjct: 651 KYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ GLC+ G +EKA       ++       +T+  L+ +  +  + +    +  ++   
Sbjct: 710 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 769

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L      Y  + T     G   +A+     MV+ G                 I    ++
Sbjct: 770 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRG-----------------ISADLVT 812

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I  +C+    + AL+ + +    GIA N +TY  L+ GL
Sbjct: 813 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 855



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 246/494 (49%), Gaps = 40/494 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY+ +LD   K GK+     +L  M+K+ + PN  T++ +++GY K G L +A+ V
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--------------- 112
           +  M Q   +P+   Y +LI+G+  AG  + A    KEM+S +L                
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578

Query: 113 --------------------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                               PD+V Y +LI+ +F+ G  + A  ++ E+ E  I+ + V 
Sbjct: 579 VGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVA 638

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +IK   + GK D    +   M E G +PDC+TYNT+I+  C  G  E+A  +++ M 
Sbjct: 639 YNALIKGLLRLGKYDPR-YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMK 697

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
             G+  N +T N ++  LC    +++A   L+      +    +++  L+  Y R EKA+
Sbjct: 698 SYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKAD 757

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           + L++ +++    +  S   YN +I    + G T +A  +L+E+++ G+  D  T+N +I
Sbjct: 758 KILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALI 817

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL----KFFRSWIL 388
            G+C+   VEKAL+ +++M      P+I T N LL GL   G++E+ +    K       
Sbjct: 818 RGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 877

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G   ++ TY+ L+S   +    +    L  EM  K   P   TY  + +   +SG++ E
Sbjct: 878 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIE 937

Query: 449 AQKFTSIMVETGKI 462
           A++  + ++  G+I
Sbjct: 938 ARELLNDLLTKGRI 951



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 263/573 (45%), Gaps = 57/573 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P++V+Y TI+++LFK G++ E  +L S M  +G+  +  T   ++ G  K+G 
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA  V + + +    P+  TY+ L++G+C  G +E A  + ++ME   + P+V+T+++
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY------------CKE----- 163
           +IN + + G   +A  ++ E+ +  + PN + + I+I  Y            CKE     
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561

Query: 164 ------------------GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                             G++D+A  ++ +M   G  PD V Y +LID   K GN   A 
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAAL 621

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M  K ++ + +  N ++  L    K D  Y + +   + G   D ++Y T+I  Y
Sbjct: 622 SIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTY 680

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
               K   AL + +EMK   IMP+  TYN +I GL ++G  E+A   L+E+L    +P  
Sbjct: 681 CIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTP 740

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T   ++  +    + +K LQ H K+V    +  +   N L++  CR G+  KA      
Sbjct: 741 ITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDE 800

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG- 444
            + +G + D VTYN LI   C    +E A    S+M    + P+  TY  +   L  +G 
Sbjct: 801 MVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGL 860

Query: 445 ---RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
               +EE +K  S M E G +                 P++ +Y   ++ +   G  K  
Sbjct: 861 MEEMMEETEKLVSEMNERGLV-----------------PNAATYDILVSGYGRVGNRKKT 903

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           + +  E   KG      TY  L++   K  K I
Sbjct: 904 IILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 936



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 224/424 (52%), Gaps = 8/424 (1%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           NV ++ +L+ L + G+++E R L+ DM  +G+ P+   Y  L+ GY K G    A+ +V 
Sbjct: 566 NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 625

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M +     DV  YN LI G    G  +  +   + +E L L PD +TYNT+IN +   G
Sbjct: 626 EMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE-LGLAPDCITYNTIINTYCIKG 684

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           ++ +A  +++E+  +GI PNAVT+NI+I   CK G ++KA   +  M    F P  +T+ 
Sbjct: 685 KTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHK 744

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            L+ A  ++   ++  ++ + +   GL+++    NT++   C      +A ++L+   KR
Sbjct: 745 FLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKR 804

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG----K 305
           G   D V+Y  LI GY       +ALK + +M    I P+  TYN ++ GLS +G     
Sbjct: 805 GISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEM 864

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+   +++E+ + G++P+  T++ ++ G+   G  +K +  H +M+ K F P + T N+
Sbjct: 865 MEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNV 924

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS---SLCKERRLEDAFGLLSEME 422
           L+S   + G + +A +     + KG+  +S TY+ L     +L  E  ++ +     E+E
Sbjct: 925 LISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIE 984

Query: 423 EKKL 426
            KKL
Sbjct: 985 VKKL 988



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 264/588 (44%), Gaps = 77/588 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P    +NT+L      G +++V+ + SDM   G+VP+  + N+LV   CK+G 
Sbjct: 85  MRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGD 144

Query: 61  LKEAMRVVDLMTQNKSLPDV--WTYNMLINGWCNAGMLEEAFRLRKEMESLKLL------ 112
           L  A+  +    +N  + D+   TYN +I G+C  G++++ F L  EM    L       
Sbjct: 145 LDLALGYL----RNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITC 200

Query: 113 -----------------------------PDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
                                         DV+  NTLI+ + E+G   +A +LI+    
Sbjct: 201 NILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWR 260

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKA-------------------CKIVRNMEENGFSPD 184
             +K + VT+N ++K +CK G + +A                     +V   E     P 
Sbjct: 261 SDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPT 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TLI A CK   +EE+  +   M   G+  + +T ++IL+  C   KL EA +L  
Sbjct: 321 LVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFR 380

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + VSY T+I   F+  +   A  L  +M  R I     T   ++ GL + G
Sbjct: 381 EMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVG 440

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           KT++A ++   +L+  + P+  T++ ++ G+C  G++E A     KM ++   P+++T +
Sbjct: 441 KTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFS 500

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            +++G  ++G+L KA+   R  + +    +++ Y  LI    K    + A     EM+ +
Sbjct: 501 SIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSR 560

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           +L      +  +   L   GR++EA+     M   G                 IDP  ++
Sbjct: 561 RLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG-----------------IDPDIVN 603

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  I+ +  +G    AL I +E ++K I  +   Y  L+ GL++  K
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 256/536 (47%), Gaps = 43/536 (8%)

Query: 33  LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
            S M+  GLVP    +N L+  +   G + +   +   M     +PDV++ N+L++  C 
Sbjct: 82  FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G L+ A    +  + + +  D VTYNT+I  F + G   + F L+ E+ + G+  +++T
Sbjct: 142 VGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            NI++K YC+ G +  A  ++ N+ + G + D +  NTLID  C+AG M +A  +++   
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSW 259

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE----------------- 255
           R  +K++ +T NT+L   C    L  A  L N     G++ DE                 
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEI--LGFWKDEDRLKNNDVVTQNEIKNL 317

Query: 256 ----VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               V+Y TLI  Y +      +  L+ +M    IMP   T +++++G  + GK  +A  
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E+ + G+ P+  ++ TII+     G+V +A    ++MV +    DIVTC  ++ GL 
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G  ++A + F + +    A + VTY+ L+   CK  ++E A  +L +ME++ + P+  
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVE----TGKINHQVVQPNTSKTPEE---------- 477
           T+++I     + G L +A      MV+       I + ++     K  E+          
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557

Query: 478 ----IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               ++ S++ +   +N     GR  +A  +  +   KGI  +   Y +L++G  K
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFK 613



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 178/346 (51%), Gaps = 34/346 (9%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD +TYNTI++    KGK  +  D+L++MK  G++PN  TYNIL+ G CK G +++
Sbjct: 664 LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEK 723

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A   +D M   + +P   T+  L+  +  +   ++  ++ +++ +  L   +  YNTLI 
Sbjct: 724 AESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLIT 783

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   G + +A  ++DE+ + GI  + VT+N +I+ YC    ++KA K    M  +G +P
Sbjct: 784 VFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP 843

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYNTL+     AG                                 E+ ++E   L+
Sbjct: 844 NITTYNTLLGGLSNAG-------------------------------LMEEMMEETEKLV 872

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  ++RG   +  +Y  L++GY R     + + L  EM  +  +P+  TYN +I   ++S
Sbjct: 873 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 932

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS---EGQVEKALQ 346
           GK  +A ++LN+LL  G IP+  T++ +  G+ +   E +++++L+
Sbjct: 933 GKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLK 978



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 209/463 (45%), Gaps = 48/463 (10%)

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           + TLI  +    R   A      +   G+ P     N ++  +   G + +   +  +M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEA---FRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             G  PD  + N L+ + CK G+++ A    R  DV     + ++ +T NT++   C + 
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV-----VDIDNVTYNTVIWGFCQKG 176

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            +D+ + LL+   KRG   D ++   L+ GY R      A  +   + +  +       N
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE- 353
            +I G  ++G   QA +++    +S +  D  T+NT++  FC  G + +A    N+++  
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 354 ------------------KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                             K+ +P +VT   L++  C+   +E++   ++  I+ G   D 
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VT ++++   C+  +L +A  L  EM E  L P+  +YA I  +L +SGR+ EA    S 
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416

Query: 456 MVETGKINHQVVQPNT----------SKTPEEI---------DPSSISYSEKINEHCSQG 496
           MV  G I+  +V   T          +K  EE+          P+ ++YS  ++ +C  G
Sbjct: 417 MVVRG-ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLG 475

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           + + A  + ++  ++ +  N  T+ +++NG  K +  +SKAVD
Sbjct: 476 KMELAELVLQKMEKEHVPPNVITFSSIINGYAK-KGMLSKAVD 517



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+  TY+ ++    + G   +   L  +M  +G VP   TYN+L+S Y K G + EA
Sbjct: 879 GLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEA 938

Query: 65  MRVV-DLMTQNKSLPDVWTYNMLINGWCNAGM---LEEAFRLRKEMESLKLL 112
             ++ DL+T+ + +P+ +TY++L  GW N      ++ + +   E+E  KLL
Sbjct: 939 RELLNDLLTKGR-IPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLL 989


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 270/530 (50%), Gaps = 21/530 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF   PD  +Y+T+++ L K GKL++  +L  +M ++G+ P+ T YNIL+ G+ K    
Sbjct: 178 EGFK--PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235

Query: 62  KEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           K AM + D + ++ S+ P+V T+N++I+G    G +++  ++ + M+  +   D+ TY++
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G   +A  + +ELDE     + VT+N M+  +C+ GKI ++ ++ R ME   
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S + V+YN LI    + G ++EA  +  +M  KG   +  T    +H LC    +++A 
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++      G +LD  +Y ++I    + ++   A  L  EM +  +  ++   NA+I GL
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  +  +A   L E+ ++G  P   ++N +I G C  G+  +A  F  +M+E  +KPD+
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T +ILL GLCR+  ++ AL+ +  ++  G   D + +N LI  LC   +L+DA  +++ 
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           ME +    +  TY  +     + G    A      M + G                 + P
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG-----------------LQP 637

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             ISY+  +   C       A++ F++ R  GI     T+  L+  ++ R
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 245/519 (47%), Gaps = 21/519 (4%)

Query: 34  SDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA 93
           S  +  G   +   Y+ ++    +   +    R+V+L+   +   D      +I  +   
Sbjct: 32  SATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKN 91

Query: 94  GMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            M ++A  + K M E     P + +YNTL+N F E+ + ++   L    +  G+ PN  T
Sbjct: 92  SMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N++IK  CK+ + +KA   +  M + GF PD  +Y+T+I+   KAG +++A  + D M 
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA-SKRGYYLDEVSYGTLITGYFRDEKA 271
            +G+  +    N ++     EK    A  L +        Y +  ++  +I+G  +  + 
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +  LK+W+ MK+ +     +TY+++I GL  +G  ++A  + NEL +     D  T+NT+
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           + GFC  G+++++L+   +++E     +IV+ NIL+ GL   G +++A   +R    KG 
Sbjct: 332 LGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           A D  TY   I  LC    +  A G++ E+E      D Y YA+I   L +  RLEEA  
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450

Query: 452 FTSIMVETG-KINHQVVQP------NTSKTPEE-----------IDPSSISYSEKINEHC 493
               M + G ++N  V           S+  E              P+ +SY+  I   C
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             G++ +A    +E  + G   +  TY  L+ GL + RK
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C  + VTYNT+++  FK G  N    +   M K GL P+  +YN ++ G C    
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
           +  AM   D    +   P V+T+N+L+    N
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 234/449 (52%), Gaps = 4/449 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+ ++  ++    ++G+  E   LL+ M  QG   +  T  ++V  +C+ G  +  
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M++  + P++  Y+  I+G C  G +++AF + +EM    L P+V T+ +LI+ 
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 125 FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G    AF+L  +L      KPN  T+ +MI  YCKEGK+ +A  ++  M E G +P
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLI  +CK G+ + AF +M+ M  +G   N  T N I+   C + K+ EAY +L
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVL 415

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             A+ +G +LD+V+Y  LIT + +      AL L+ +M E+   P   TY  +I    Q 
Sbjct: 416 RMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQ 475

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + EQ+  + ++ L  G++P + T+ ++I G+C  G++  AL+   +MV+    PD +T 
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITY 535

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+S LC+E  LE+A   F + + K      VT  TL    C+  ++  A   L  +++
Sbjct: 536 GALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDK 595

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           ++     +T  A+   L   G L+ A  F
Sbjct: 596 RQ---QAHTADALVRKLSTVGNLDAASLF 621



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 219/425 (51%), Gaps = 8/425 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V Y+  +D L ++G + +   +L +M  +GL PN  T+  L+ G CK+GW
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 61  LKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           ++ A R+   + ++ S  P+V TY ++I G+C  G L  A  L   M    L P+  TY 
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TLI+   + G    AF+L++++   G  PN  T+N +I  +CK+GKI +A K++R     
Sbjct: 362 TLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQ 421

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G   D VTY  LI  +CK G++  A  +   M  K    +  T  TI+   C +++++++
Sbjct: 422 GLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQS 481

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L +     G    + +Y ++I GY R  K   ALK+++ M +   +P + TY A+I  
Sbjct: 482 QQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISS 541

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  + E+A  +   +L   ++P + T  T+ + +C   ++  A+ F +++ ++     
Sbjct: 542 LCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---Q 598

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T + L+  L   G L+ A  F ++ + K  AVD  TY + I+S  +  R    + L S
Sbjct: 599 AHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNR----YALAS 654

Query: 420 EMEEK 424
           E+ EK
Sbjct: 655 EISEK 659



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 131/531 (24%), Positives = 217/531 (40%), Gaps = 92/531 (17%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYN-ILVSGYCKLGWLKEAMRVVDLMTQNKS--LPDV 80
           G+L E  D+L +++  GL     T N +L  G    G    A    D M +      PD 
Sbjct: 122 GRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDH 181

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
            ++  L+ G C  G  E                                   EA  L+  
Sbjct: 182 RSFRALVLGCCREGRFE-----------------------------------EADALLAA 206

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           +   G   ++ T  ++++ +C++G+      + R M E G  P+ V Y+  ID  C+ G 
Sbjct: 207 MWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGY 266

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           +++AF +++ M  KGLK N  T  +++  LC    ++ A+ L                  
Sbjct: 267 VKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLF----------------- 309

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
                         LKL   +K     P+  TY  MI G  + GK  +A  +L  +++ G
Sbjct: 310 --------------LKL---VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + P+  T+ T+IHG C  G  ++A +  NKM  + F P+I T N ++ G C++G +++A 
Sbjct: 353 LAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAY 412

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI---- 436
           K  R    +G  +D VTY  LI+  CK+  +  A  L  +M EK   PD +TY  I    
Sbjct: 413 KVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMY 472

Query: 437 ------------HTALVESGRLEEAQKFTSIMV---ETGKINHQVVQPNTSKTPEEIDPS 481
                           +  G +   Q +TS++      GK+    ++           P 
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLT-SALKVFERMVQHGCLPD 531

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           SI+Y   I+  C + R ++A  +FE    K +     T + L     +R K
Sbjct: 532 SITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDK 582



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 181/401 (45%), Gaps = 54/401 (13%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           E+GR  EA  ++ EL  HG+     T N    W  + G        +R+       P C 
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETAN----WVLRVG--------LRH-------PGCF 160

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +              EAF   D M R   G++ +  +   ++   C E + +EA  LL 
Sbjct: 161 AHA------------REAF---DGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLA 205

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +   +G+ LD  +   ++  + R  +      L+  M E    P+   Y+A I GL + G
Sbjct: 206 AMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERG 265

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTC 363
             +QA  +L E++  G+ P+  T  ++I G C  G +E+A +   K+V+ S +KP++ T 
Sbjct: 266 YVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTY 325

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +++ G C+EG L +A       + +G A ++ TY TLI   CK    + AF L+++M+ 
Sbjct: 326 TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKL 385

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +   P+ YTY AI     + G+++EA K   +    G                 +    +
Sbjct: 386 EGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQG-----------------LHLDKV 428

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           +Y+  I EHC QG    AL +F++  +K    +  TY  ++
Sbjct: 429 TYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTII 469



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 54/266 (20%)

Query: 302 QSGKTEQAIDMLNELLQSGMI--------------------------------------P 323
           ++G+  +A DML EL   G+                                       P
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D  +F  ++ G C EG+ E+A      M  + F  D  TC +++   CR+G        F
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           R     G   + V Y+  I  LC+   ++ AF +L EM  K L P+ YT+ ++   L + 
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G +E A +    +V++        +PN             +Y+  I  +C +G+   A  
Sbjct: 300 GWMERAFRLFLKLVKSSS-----YKPNVH-----------TYTVMIGGYCKEGKLARAEM 343

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           +     ++G+A N +TY  L++G  K
Sbjct: 344 LLGRMVEQGLAPNTNTYTTLIHGHCK 369


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 229/443 (51%), Gaps = 4/443 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDL--LSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           F C     ++N++L+ + ++G  +   +        K  + PN  ++N+++   CKLG +
Sbjct: 145 FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV 204

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A+ V   M   K  PDV+TY  L++G C    ++EA  L  EM+     P  VT+N L
Sbjct: 205 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 264

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN   + G  +   KL+D +   G  PN VT+N +I   C +GK+DKA  ++  M  +  
Sbjct: 265 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 324

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTY TLI+   K G   +   ++  +  +G   N    +T++  L  E+K +EA  
Sbjct: 325 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 384

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L     ++G   + V Y  LI G  R+ K + A ++  EM  +   P+ FTY+++I G  
Sbjct: 385 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 444

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G +++AI +  E+ ++  +P+E  ++ +IHG C +G++ +A+     M+ +  +PD+V
Sbjct: 445 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 504

Query: 362 TCNILLSGLCREGILEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             + ++ GLC  G +E  LK F   + +      D VTYN L+ +LCK+  +  A  LL+
Sbjct: 505 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 564

Query: 420 EMEEKKLGPDRYTYAAIHTALVE 442
            M ++   PD  T      AL E
Sbjct: 565 SMLDRGCNPDLITCNIFLNALRE 587



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 248/462 (53%), Gaps = 8/462 (1%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+V ++N++I   C  G+++ A  + +EM   K  PDV TY TL++   +  R  EA  L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G  P++VT N++I   CK+G + +  K+V NM   G  P+ VTYNT+I+  C 
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A  ++D M       N +T  T+++ L  + +  +   LL+S  +RG++ +E +
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI+G F++EK+  A+ LW +M E+   P+   Y+A+I GL + GK ++A ++L E++
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G  P+  T++++I GF   G  +KA++   +M + +  P+ +  ++L+ GLC +G L 
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAA 435
           +A+  +   + +G   D V Y+++I  LC    +E    L +EM  +E    PD  TY  
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 545

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--SKTPEEIDPSSIS---YSEKIN 490
           +  AL +   +  A    + M++ G  N  ++  N   +   E+++P         E + 
Sbjct: 546 LLRALCKQNSISHAIDLLNSMLDRG-CNPDLITCNIFLNALREKLNPPQDGREFLDELVV 604

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               + R   A +I E   QK +  N ST+  ++  L K +K
Sbjct: 605 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 646



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 246/500 (49%), Gaps = 25/500 (5%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           +T+  L+  Y   G      +V D M + + +     + ++   +  A + E+A  L   
Sbjct: 81  STFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGR 140

Query: 106 M-ESLKLLPDVVTYNTLINRFFESG---RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           M +  +    V ++N+++N   + G   R++E ++      +  I PN ++ N++IK  C
Sbjct: 141 MVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE-CGVGGKTNISPNVLSFNLVIKAMC 199

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K G +D+A ++ R M      PD  TY TL+D  CK   ++EA  ++D M  +G   +++
Sbjct: 200 KLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSV 259

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +++ LC +  +     L+++   +G   +EV+Y T+I G     K ++A+ L D M
Sbjct: 260 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 319

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
              + +P+  TY  +I GL + G++   + +L+ L + G   +E  ++T+I G   E + 
Sbjct: 320 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 379

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E+A+    KMVEK  +P+IV  + L+ GLCREG L++A +     + KG   ++ TY++L
Sbjct: 380 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 439

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I    K    + A  +  EM +    P+   Y+ +   L E G+L EA    + M+  G 
Sbjct: 440 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG- 498

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE--TRQKGIAINKST 519
                           + P  ++YS  I+  C+ G  +  L++F E   ++     +  T
Sbjct: 499 ----------------LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 542

Query: 520 YMNLMNGLIKRRKSISKAVD 539
           Y  L+  L K + SIS A+D
Sbjct: 543 YNILLRALCK-QNSISHAID 561



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 135/255 (52%), Gaps = 23/255 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ V Y+ ++D L ++GKL+E +++L +M  +G  PN  TY+ L+ G+ K G  ++A
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +RV   M +N  +P+   Y++LI+G C  G L EA  +   M    L PDVV Y+++I+ 
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 512

Query: 125 FFESGRSMEAFKLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
              +G      KL +E+   E   +P+ VT+NI+++  CK+  I  A  ++ +M + G +
Sbjct: 513 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 572

Query: 183 PDCVTYNTLIDANCKAGNMEE---------------------AFRMMDVMGRKGLKMNTI 221
           PD +T N  ++A  +  N  +                     A ++++VM +K L  N  
Sbjct: 573 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 632

Query: 222 TLNTILHTLCCEKKL 236
           T   I+  LC  KK+
Sbjct: 633 TWERIIPELCKPKKV 647


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 265/531 (49%), Gaps = 22/531 (4%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G GC PD V+Y  ++  LF +G++++  +L ++M ++G+VPN  TYN +V   CK   +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  V+  M  N   PD  TY  +I+G+   G  +EA ++ KEM    L+PD+VT+N+L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++   +  RS EA ++   +   G KP+ ++++I++  Y  EG+      +  +M +NG 
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D   +N LI+A+ K G M+EA  +   M  +G+  N +T  T++  LC   +L +A  
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI-MPSTFTYNAMIWGL 300
            L+     G   + V Y +LI G+       +A +L  EM ++ I  P+   ++++I  L
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+   A D+ N ++  G  PD  TFN++I G+C  G+++KA    + MV    +PD+
Sbjct: 564 CNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT + L++G  + G ++  L  FR  + K     +VTY+ ++  L +  R   A  +  E
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN--HQVVQPNTSKTPEEI 478
           M E        TY  I   L  +   +EA    ++  + G +N   ++   NT       
Sbjct: 684 MIESGTAMSISTYTIILQGLCRNNCTDEA---ITLFHKLGAMNLKFEIAILNT------- 733

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     I+      R ++A  +F      G+  N STY  ++  L+K
Sbjct: 734 ---------MIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLK 775



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 268/529 (50%), Gaps = 22/529 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRD-LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G   D +  NT L  L    + +E    LL  M + G VP+  +YN ++   C     +E
Sbjct: 195 GLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQE 254

Query: 64  AMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           A+ ++  MT+     PDV +Y M+I+G    G + +A  L  EM    ++P+VVTYN+++
Sbjct: 255 ALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIV 314

Query: 123 NRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +   ++ R+M+  +L+  ++ ++ I+P+ VT+  MI  Y   G+  +A K+ + M   G 
Sbjct: 315 HALCKA-RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGL 373

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VT+N+L+D+ CK    +EA  +   +  KG K + I+ + +LH    E +  +   
Sbjct: 374 IPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNN 433

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +S +  G   D   +  LI  + +    + AL ++ EM+ + + P+  TY  +I  L 
Sbjct: 434 LFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALC 493

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF-KPDI 360
           + G+   A++ L++++  G+ P+   ++++I GFC+ G + KA +  ++M+++   +P+I
Sbjct: 494 RMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNI 553

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              + ++  LC EG +  A   F   I  G   D  T+N+LI   C   +++ AFG+L  
Sbjct: 554 TFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDA 613

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  TY+ +     +SGR+++       M+                  + + P
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREML-----------------CKRVKP 656

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++++YS  ++     GR   A ++F E  + G A++ STY  ++ GL +
Sbjct: 657 TTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCR 705



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 233/462 (50%), Gaps = 2/462 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLG 59
           M   GC+PD  +YNT++ +L    +  E  D+L  M K  G  P+  +Y +++ G    G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            + +A  + + M Q   +P+V TYN +++  C A  +++A  + ++M    + PD VTY 
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I+ +   GR  EA K+  E+   G+ P+ VT N ++   CK  +  +A +I  ++   
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD ++Y+ L+      G   +   +   M   G+  ++   N +++       +DEA
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            ++      +G   + V+Y T+I    R  +   A++   +M    + P+T  Y+++I G
Sbjct: 467 LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526

Query: 300 LSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
               G   +A ++++E++  G+  P+ T F++IIH  C+EG+V  A    N ++    +P
Sbjct: 527 FCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRP 586

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI T N L+ G C  G ++KA     + +  G   D VTY+TLI+   K  R++D   L 
Sbjct: 587 DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILF 646

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EM  K++ P   TY+ +   L  +GR   A+K    M+E+G
Sbjct: 647 REMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 256/507 (50%), Gaps = 18/507 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VT+N+++D+L K  +  E  ++   +  +G  P+  +Y+IL+ GY   G   + 
Sbjct: 372 GLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDM 431

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   MT N  + D   +N+LIN     GM++EA  +  EM    + P+VVTY T+I  
Sbjct: 432 NNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAA 491

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-P 183
               GR  +A + + ++   G+KPN V ++ +I+ +C  G + KA ++V  M + G   P
Sbjct: 492 LCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRP 551

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +   ++++I + C  G +  A  + +++   G + +  T N+++   C   K+D+A+ +L
Sbjct: 552 NITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVL 611

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           ++    G   D V+Y TLI GYF+  + +  L L+ EM  +++ P+T TY+ ++ GL ++
Sbjct: 612 DAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRA 671

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+T  A  M +E+++SG     +T+  I+ G C     ++A+   +K+   + K +I   
Sbjct: 672 GRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAIL 731

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  L +    E+A   F S    G   ++ TY  +I +L KE  +E+A  + S ME+
Sbjct: 732 NTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEK 791

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P       I   L++ G + +A  + S      K++  ++    S T         
Sbjct: 792 TGCAPSSRLLNDIIRMLLQKGEIVKAGYYMS------KVDGTIISLEASTT--------- 836

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQ 510
             S  I+   S+GRY++ ++      Q
Sbjct: 837 --SLLISLFASKGRYREQIKFLPAKYQ 861



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 256/532 (48%), Gaps = 27/532 (5%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR-VVDL 70
           TY  ++D   +  + +      + + + GL  +    N  +   C      EA+  ++  
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHR 226

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESG 129
           M++   +PD ++YN +I   C     +EA  +   M +     PDVV+Y  +I+  F  G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
              +A  L +E+ + G+ PN VT+N ++   CK   +DKA  ++R M +N   PD VTY 
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            +I      G  +EA +M   M R+GL  + +T N+++ +LC  K+  EA  + +S + +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G+  D +SY  L+ GY  + +      L+  M +  I+  +  +N +I   ++ G  ++A
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           + +  E+   G+ P+  T+ T+I   C  G++  A++  ++M+    KP+ V  + L+ G
Sbjct: 467 LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTY-NTLISSLCKERRL---EDAFGLLSEMEEKK 425
            C  G L KA +     + +G    ++T+ +++I SLC E R+   +D F L+  + ++ 
Sbjct: 527 FCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDR- 585

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD +T+ ++       G++++A      MV  G                  +P  ++Y
Sbjct: 586 --PDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGT-----------------EPDVVTY 626

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR-RKSISK 536
           S  IN +   GR  D L +F E   K +     TY  +++GL +  R S +K
Sbjct: 627 STLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAK 678



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 223/473 (47%), Gaps = 25/473 (5%)

Query: 80  VWTYNMLINGWCNAGM--LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK- 136
           V TY +L++  C A    L  AF  R     L+   D +  NT +     + R+ EA   
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLR--TDGIVTNTFLKCLCYAKRTDEALSM 222

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDCVTYNTLIDAN 195
           L+  + E G  P+A ++N +IK  C   +  +A  ++  M + +G SPD V+Y  +I   
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL 282

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
              G + +A  + + M +KG+  N +T N+I+H LC  + +D+A ++L          DE
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V+Y  +I GY    +   A K++ EM    ++P   T+N+++  L +  ++++A ++ + 
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHS 402

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +   G  PD  +++ ++HG+ +EG+        + M +     D    NIL++   + G+
Sbjct: 403 IATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGM 462

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           +++AL  F     +G + + VTY T+I++LC+  RL DA   LS+M    L P+   Y +
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522

Query: 436 IHTALVESGRLEEAQKFTSIMVETG----------KINHQVVQPNTSKTPEEI------- 478
           +       G L +A++  S M++ G           I H +         +++       
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582

Query: 479 --DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              P   +++  I+ +C  G+   A  + +     G   +  TY  L+NG  K
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 1/384 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY T++ AL + G+L +  + LS M   GL PN   Y+ L+ G+C  G 
Sbjct: 473 MRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGD 532

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  +V ++M Q    P++  ++ +I+  CN G +  A  +   +  +   PD+ T+N
Sbjct: 533 LIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFN 592

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +LI+ +   G+  +AF ++D +   G +P+ VT++ +I  Y K G+ID    + R M   
Sbjct: 593 SLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCK 652

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P  VTY+ ++D   +AG    A +M   M   G  M+  T   IL  LC     DEA
Sbjct: 653 RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEA 712

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L +         +     T+I   ++ ++   A  L+  +    ++P+  TY  MI  
Sbjct: 713 ITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIIN 772

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  E+A  M + + ++G  P     N II     +G++ KA  + +K+       +
Sbjct: 773 LLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLE 832

Query: 360 IVTCNILLSGLCREGILEKALKFF 383
             T ++L+S    +G   + +KF 
Sbjct: 833 ASTTSLLISLFASKGRYREQIKFL 856



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 157/371 (42%), Gaps = 34/371 (9%)

Query: 194 ANCKAGNM--EEAFRMMDVMGRKGLKMNTITLNTILHTLC-------CEKKLDEAYMLLN 244
           A  +AG    E+A  + D + R+   ++   LN  L  L        C      A  L N
Sbjct: 90  ARVRAGTFSTEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFN 149

Query: 245 -----SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                 A  R   L   +YG L+    R  + +     +  +    +       N  +  
Sbjct: 150 RICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKC 209

Query: 300 LSQSGKTEQAIDML-NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFK 357
           L  + +T++A+ ML + + + G +PD  ++NT+I   C   + ++AL    +M +     
Sbjct: 210 LCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCS 269

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD+V+  +++ GL  EG + KA   F   + KG   + VTYN+++ +LCK R ++ A  +
Sbjct: 270 PDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELV 329

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV---------Q 468
           L +M +  + PD  TY A+       GR +EA K    M   G I   V          +
Sbjct: 330 LRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCK 389

Query: 469 PNTSKTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
              SK   EI          P  ISYS  ++ + ++GR+ D   +F      GI  +   
Sbjct: 390 HKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC 449

Query: 520 YMNLMNGLIKR 530
           +  L+N   KR
Sbjct: 450 FNILINAHAKR 460



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 19/257 (7%)

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           +E   R +  +  TY  ++    ++ + +        LL++G+  D    NT +   C  
Sbjct: 154 EEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYA 213

Query: 339 GQVEKALQ-FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK-FFRSWILKGKAVDSV 396
            + ++AL    ++M E    PD  + N ++  LC     ++AL    R     G + D V
Sbjct: 214 KRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVV 273

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           +Y  +I  L  E  +  A  L +EM +K + P+  TY +I  AL ++  +++A+     M
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333

Query: 457 VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
            +                   I P  ++Y+  I+ +   GR+K+A ++F+E  ++G+  +
Sbjct: 334 FD-----------------NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPD 376

Query: 517 KSTYMNLMNGLIKRRKS 533
             T+ +LM+ L K ++S
Sbjct: 377 IVTFNSLMDSLCKHKRS 393


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 228/453 (50%), Gaps = 17/453 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T N IL  L +      VR L   +      PN  T+NI++   CK G L EA  +
Sbjct: 155 PNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEARSL 210

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +   LPDV T+N LI+G+   G L+E  +L +EM       DVVTYN LIN F +
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR   A+     +   G+  N VT +  +  +CKEG + +A K+   M   G + +  T
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LID  CKAG +++A  ++D M R+G+ +N +T   ++  LC E+K+ EA  +L    
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   +E+ Y TLI G+F ++ + +AL L  EMK + +      Y A+I GL    K +
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L ++ +SG+ P+   + T++      G+V +A+    K+++  F+P+        
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN-------- 502

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                 G L +A++ F   + KG ++D V Y  L+    K+  L DAF L ++M +  L 
Sbjct: 503 -----NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 557

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            D + Y    +       + EA++  S M+  G
Sbjct: 558 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 590



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 210/411 (51%), Gaps = 13/411 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLPD VT+N+++D   K G+L+EV  L+ +M++ G   +  TYN L++ +CK G 
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A      M +   + +V T++  ++ +C  G++ EA +L  +M    +  +  TY  
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++GR  +A  L+DE+   G+  N VT+ +++   CKE K+ +A  ++R ME+ G
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + + Y TLI  +    N E+A  ++  M  KGL+++      ++  LC   KLDEA 
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    + G   + + Y T++   F+  K   A+ +      ++I+ S F  N      
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML-----QKILDSGFQPN------ 502

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G   +A+ + NE++  GM  D+  +  ++ G+  +G +  A     KM++   + D+
Sbjct: 503 --NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 560

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                 +SG C   ++ +A + F   I  G A D   YN LI+ + + R L
Sbjct: 561 FCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIREL 611



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 224/507 (44%), Gaps = 47/507 (9%)

Query: 40  GLVPNRT----TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
            L P R+      + L+S     G L +A+R V  + + +  P+  T N ++        
Sbjct: 113 ALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR--- 169

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
            + + RL + +      P+V T+N +I+   + G   EA  L   + E G  P+ VT N 
Sbjct: 170 -DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNS 228

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  Y K G++D+  ++V  M  +G   D VTYN LI+  CK G ME A+     M R+G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +  N +T +T +   C E  + EA  L      RG  L+E +Y  LI G  +  + + A+
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L DEM  + +  +  TY  ++ GL +  K  +A D+L  + ++G+  +E  + T+IHG 
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                 EKAL   ++M  K  + DI     L+ GLC    L++A          G   + 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 396 VTYNTLISSLCKERRLEDAFGLL----------------------SEMEEKKLGPDRYTY 433
           + Y T++ +  K  ++ +A  +L                      +EM  K +  D+  Y
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVY 528

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
            A+    ++ G L +A    + M+++G                 +      Y+  I+  C
Sbjct: 529 TALLDGYLKQGNLHDAFALKAKMIDSG-----------------LQLDLFCYTCFISGFC 571

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTY 520
           +     +A ++F E    GIA +++ Y
Sbjct: 572 NLNMMPEAREVFSEMIGHGIAPDRAVY 598



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 201/423 (47%), Gaps = 21/423 (4%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           +TL++   + G   +A + +  + E  + PN  T N ++    +    D++ ++VR + E
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
              +P+  T+N +ID  CK G + EA  +   M   G   + +T N+++       +LDE
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              L+    + G   D V+Y  LI  + +  +   A   +  MK   +M +  T++  + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
              + G   +A+ +  ++   GM  +E T+  +I G C  G+++ A+   ++MV +    
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           ++VT  +L+ GLC+E  + +A    R     G   + + Y TLI      +  E A GLL
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           SEM+ K L  D   Y A+   L    +L+EA+   + M E+G      ++PN       +
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG------LEPNYIIYTTMM 475

Query: 479 D--------PSSISYSEKINEHCSQ---GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           D        P +I+  +KI +   Q   G   +A+Q+F E   KG++++K  Y  L++G 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 535

Query: 528 IKR 530
           +K+
Sbjct: 536 LKQ 538



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 24/267 (8%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A++    ++E ++ P+T T N ++  L++    +++  ++  L +    P+  TFN +I 
Sbjct: 141 AVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVID 196

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
             C EG++ +A    ++M E    PD+VT N L+ G  + G L++  +        G   
Sbjct: 197 FLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA 256

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-F 452
           D VTYN LI+  CK  R+E A+G  + M+ + +  +  T++    A  + G + EA K F
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLF 316

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             + V    +N                    +Y+  I+  C  GR  DA+ + +E  ++G
Sbjct: 317 AQMRVRGMALNE------------------FTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 513 IAINKSTYMNLMNGLIKRRKSISKAVD 539
           + +N  TY  L++GL K RK +++A D
Sbjct: 359 VPLNVVTYTVLVDGLCKERK-VAEAED 384


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 202/357 (56%), Gaps = 2/357 (0%)

Query: 36  MKKQGLVP--NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA 93
           + +Q L P  + + ++  V   CK   + +AM+++D M    S PDV TYN+LING C  
Sbjct: 71  INQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 130

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           G L+EA +    M S    P+V+T+N ++     +GR M+A KL+ ++   G  P+ VT 
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 190

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           NI+I + C++G + +A  I+  M  +G +P+ ++YN L+   CK   M+ A   +D+M  
Sbjct: 191 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 250

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +G   + +T NT+L  LC + K+D A  +LN  S +G     ++Y T+I G  +  K  R
Sbjct: 251 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER 310

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A+KL DEM+ + + P   TY++++ GLS+ GK ++AI   ++L   G+ P+  T+N+I+ 
Sbjct: 311 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIML 370

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           G C   Q ++A+ F   M+ K  KP   T  IL+ G+  EG+ ++AL        +G
Sbjct: 371 GLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 194/344 (56%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           ++  +   C    + +A +L  EM +    PDVVTYN LIN   + GR  EA K ++ + 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
            +G +PN +THNI+++  C  G+   A K++ +M   G SP  VT+N LI+  C+ G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  +++ M   G   N+++ N +LH  C EKK+D A   L+    RG Y D V+Y TL+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
           T   +D K + A+++ +++  +   P   TYN +I GLS+ GKTE+AI +L+E+ + G+ 
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T+++++ G   EG+V++A++F + +     +P+ +T N ++ GLC+    ++A+ F
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
               I K       TY  LI  +  E   ++A  LL+E+  + L
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 191/347 (55%), Gaps = 5/347 (1%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ESG   +A KL+DE+   G KP+ VT+N++I   CKEG++D+A K + NM   G  P+ +
Sbjct: 95  ESGVG-QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+N ++ + C  G   +A +++  M RKG   + +T N +++ LC +  L  A  +L   
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + +SY  L+ G+ +++K +RA++  D M  R   P   TYN ++  L + GK 
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A+++LN+L   G  P   T+NT+I G    G+ E+A++  ++M  K  KPDI+T + L
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 333

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +SGL REG +++A+KFF      G   +++TYN+++  LCK R+ + A   L+ M  K+ 
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 393

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN----HQVVQP 469
            P   TY  +   +   G  +EA    + +   G +      QV  P
Sbjct: 394 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAAP 440



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 188/335 (56%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           K+  + +   LL +M+ +G  P+  TYN+L++G CK G L EA++ ++ M      P+V 
Sbjct: 94  KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C+ G   +A +L  +M      P VVT+N LIN     G    A  +++++
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
             HG  PN++++N ++  +CKE K+D+A + +  M   G  PD VTYNTL+ A CK G +
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A  +++ +  KG     IT NT++  L    K + A  LL+   ++G   D ++Y +L
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 333

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           ++G  R+ K + A+K + +++   I P+  TYN+++ GL +S +T++AID L  ++    
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 393

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            P E T+  +I G   EG  ++AL   N++  +  
Sbjct: 394 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 178/322 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN +++ + K+G+L+E    L++M   G  PN  T+NI++   C  G 
Sbjct: 108 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 167

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A +++  M +    P V T+N+LIN  C  G+L  A  + ++M      P+ ++YN 
Sbjct: 168 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 227

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +   A + +D +   G  P+ VT+N ++   CK+GK+D A +I+  +   G
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 287

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  +TYNT+ID   K G  E A +++D M RKGLK + IT ++++  L  E K+DEA 
Sbjct: 288 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 347

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +     G   + ++Y +++ G  +  + +RA+     M  ++  P+  TY  +I G+
Sbjct: 348 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 407

Query: 301 SQSGKTEQAIDMLNELLQSGMI 322
           +  G  ++A+D+LNEL   G++
Sbjct: 408 AYEGLAKEALDLLNELCSRGLV 429



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 137/266 (51%), Gaps = 17/266 (6%)

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++    +A+KL DEM+ +   P   TYN +I G+ + G+ ++AI  LN +   G  P+  
Sbjct: 94  KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T N I+   CS G+   A +  + M+ K   P +VT NIL++ LCR+G+L +A+      
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
            + G   +S++YN L+   CKE++++ A   L  M  +   PD  TY  + TAL + G++
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           + A +  + +   G                   P  I+Y+  I+     G+ + A+++ +
Sbjct: 274 DVAVEILNQLSSKG-----------------CSPVLITYNTVIDGLSKVGKTERAIKLLD 316

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
           E R+KG+  +  TY +L++GL +  K
Sbjct: 317 EMRRKGLKPDIITYSSLVSGLSREGK 342



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 17/226 (7%)

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA+ +L+E+   G  PD  T+N +I+G C EG++++A++F N M     +P+++T NI+L
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 159

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             +C  G    A K     + KG +   VT+N LI+ LC++  L  A  +L +M      
Sbjct: 160 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 219

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  +Y  +     +  +++ A ++  IMV  G                   P  ++Y+ 
Sbjct: 220 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG-----------------CYPDIVTYNT 262

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            +   C  G+   A++I  +   KG +    TY  +++GL K  K+
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 17/162 (10%)

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+E  + +A+K       KG   D VTYN LI+ +CKE RL++A   L+ M      P+ 
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T+  I  ++  +GR  +A+K  S M+  G                   PS ++++  IN
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKG-----------------CSPSVVTFNILIN 195

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             C QG    A+ I E+    G   N  +Y  L++G  K +K
Sbjct: 196 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 257/535 (48%), Gaps = 26/535 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP   TY+ ++D   +  +L+        + +QG+  +    + L+ G C      EA+ 
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 67  VV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR-LRKEMESLKLLP-DVVTYNTLIN 123
           V+   M +   +PD  +Y+ ++   C+ G  + A   LR  ++     P +VV Y+T+++
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             F+ G+  EA  L  E+ + G+ PN VT+N +I   CK   +DKA  I+R M  NG  P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTYNTLI      G  ++A RM   M  +G+  NT+T +T +  LC   +++EA    
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S   +G+ L+ +SY TL+ GY           L++ M    I+P+   +N ++ G ++ 
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +A+ +  ++ + G+ PD  T+  +IH FC  G ++ A+   N M++K  +P+    
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA---FGLLSE 420
             L+ G C  G L KA +       KG     +++ +LI+ LCKE R+ +A   F ++  
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIR 519

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
             EK    D   + ++       G++ EA +    MV  G                 I+P
Sbjct: 520 TGEKA---DVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG-----------------IEP 559

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             ++Y   +N  C  GR  D L +F E   KG+     TY  +++GL    ++ +
Sbjct: 560 DIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAA 614



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 244/529 (46%), Gaps = 70/529 (13%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G GC  + V Y+T++  LFK+GK+ E  DL  +M +QG+ PN  TYN ++   CK   +
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  ++  M  N   PD  TYN LI+G+   G  ++A R+ KEM S  ++P+ VT +T 
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322

Query: 122 INRFFESGRSMEAFKLIDE-----------------------------------LDEHGI 146
           +    + GR  EA +  D                                    +   GI
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            PN    NI++  Y K G + +A  I  +M++ G +PD +TY  +I A C+ G+M++A  
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442

Query: 207 MMDVMGRKGLKMN-----------------------------------TITLNTILHTLC 231
             + M  KG++ N                                    ++  ++++ LC
Sbjct: 443 KFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLC 502

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
            E ++ EA  + +   + G   D   + +LI GY    K + A ++ D M    I P   
Sbjct: 503 KEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIV 562

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           TY  ++ G  ++G+ +  + +  ELL  G+ P   T+  I+ G    G+   A +   +M
Sbjct: 563 TYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           +E      I T +ILL+GLCR    E+A+  F+         D V  N +IS + K RR 
Sbjct: 623 IESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRR 682

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           E+A GL + + +  L P   TY  +   L++ G +EEA+   S+M+++G
Sbjct: 683 EEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 235/449 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P+ VT +T +  L K G++ E R+    M  +G   N  +Y+ L+ GY   G 
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGC 366

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +   + +LM ++  +P+   +N+L+NG+   GM+ EA  + ++M+   L PDV+TY  
Sbjct: 367 LVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLA 426

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F   G   +A    + + + G++PN   +  +I+ +C  G + KA ++V  +   G
Sbjct: 427 VIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG 486

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  +++ +LI+  CK G + EA R+ D++ R G K +     +++   C   K+ EA+
Sbjct: 487 LGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF 546

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++    G   D V+YGTL+ G  ++ + +  L L+ E+  + + P+TFTY  ++ GL
Sbjct: 547 RVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGL 606

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G+T  A +M  E+++SG+     T++ ++ G C     E+A+    K+   + K DI
Sbjct: 607 FHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDI 666

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  NI++S + +    E+A   F S    G      TY  ++ +L KE  +E+A G+ S 
Sbjct: 667 VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSV 726

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M +  L P  +    I   L+E G + +A
Sbjct: 727 MLKSGLSPTSHFINVIVRTLLEKGEIVKA 755



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 178/399 (44%), Gaps = 35/399 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+   +N +++   K G + E   +  DM+K+GL P+  TY  ++  +C++G + +A
Sbjct: 381 GIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDA 440

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN- 123
           M   + M      P+   Y  LI G+C  G L +A  L  E+ +  L P ++++ +LIN 
Sbjct: 441 MDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINH 500

Query: 124 -----RFFES-----------------------------GRSMEAFKLIDELDEHGIKPN 149
                R FE+                             G+  EAF++ D +   GI+P+
Sbjct: 501 LCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+  ++   CK G+ID    + R +   G  P   TY  ++D    AG    A  M  
Sbjct: 561 IVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G+ +   T + +L  LC     +EA  +           D V    +I+  F+  
Sbjct: 621 EMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKAR 680

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +   A  L+  + +  ++P+  TY  M+  L + G  E+A  + + +L+SG+ P     N
Sbjct: 681 RREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFIN 740

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            I+     +G++ KA  +  ++  KS   +  T ++LLS
Sbjct: 741 VIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLS 779



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 119/245 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTY T+++   K G++++   L  ++  +G+ P   TY I++ G    G 
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +   M ++     + TY++L+ G C     EEA  + +++ ++ +  D+V  N 
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I++ F++ R  EA  L   + ++G+ P   T+ IM++   KEG +++A  +   M ++G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP     N ++    + G + +A   M  +  K +     T + +L    C+ K  E  
Sbjct: 732 LSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHL 791

Query: 241 MLLNS 245
            LL +
Sbjct: 792 NLLPA 796



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 130/267 (48%), Gaps = 26/267 (9%)

Query: 274 ALKLWDEMK----ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           A+ L++ M      R  +P+ +TY+ +I    ++ + + A      LL+ GM  D    +
Sbjct: 83  AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142

Query: 330 TIIHGFCSEGQVEKALQ--FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +++ G C   + ++A+   FH +M E    PD ++ + +L  +C +G  + AL   R  +
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFH-RMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAV 201

Query: 388 LKGKA--VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +G     + V Y+T++  L KE ++ +A  L  EM ++ + P+  TY ++  AL ++  
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +++AQ     MV  G                 + P +++Y+  I+ + + G++K A+++F
Sbjct: 262 VDKAQGILRQMVGNG-----------------VQPDNVTYNTLIHGYSTLGQWKQAVRMF 304

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRK 532
           +E   +G+  N  T    +  L K  +
Sbjct: 305 KEMTSRGVIPNTVTCSTFVAFLCKHGR 331


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 233/489 (47%), Gaps = 35/489 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+  T NT+++A  K G + E    +S + + GL P+  TY  L+ GYC+   +  A +
Sbjct: 211 VPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYK 270

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V ++M       +  +Y  +I+G C AG ++E   L K+M      P V TY  +I+  F
Sbjct: 271 VFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALF 330

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            + R++E   L +E+ E   +PN  T+ +M+   CKE K+D++ +I+  M E G  P  V
Sbjct: 331 GNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVV 390

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN--------------------------- 219
           TYN LI   C+ G +E A  ++ +M     + N                           
Sbjct: 391 TYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM 450

Query: 220 --------TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                    +T N+++H  C     D AY LL+   + G   D+ +Y   I    + ++ 
Sbjct: 451 LESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRM 510

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A  L++ +KE+ I  +   Y A+I G  ++GK ++AI +L  +     +P+ +T+N++
Sbjct: 511 EEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSL 570

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G C EG+V++ L     M +   KP + T  IL+  + REG  + A + F   +  G 
Sbjct: 571 IYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGH 630

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D  TY   I + C    +++A G+++ M E  + PD  TY  + +A    G   +A  
Sbjct: 631 KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFN 690

Query: 452 FTSIMVETG 460
               M++ G
Sbjct: 691 VLKRMLDAG 699



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 221/428 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  + V+Y TI+  L + G+++E   L   M++    P   TY +++        
Sbjct: 275 MPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDR 334

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E M + + M +    P+V TY ++++  C    L+E+ R+  EM    L+P VVTYN 
Sbjct: 335 NLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  + E GR   A +++  ++ +  +PN  T+N +I  + K   + KA  ++  M E+ 
Sbjct: 395 LIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK 454

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  VTYN+LI   CKAG+ + A++++D++   GL  +  T +  + TLC  K+++EA 
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L NS  ++G   +EV Y  LI G+ +  K + A+ L + M     +P++ TYN++I+G+
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK ++ + M+  + + G+ P   T+  +I     EG  + A +  N+MV    KPD+
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T    +   C  G +++A       I  G   DS+TY  LIS+  +     DAF +L  
Sbjct: 635 YTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKR 694

Query: 421 MEEKKLGP 428
           M +    P
Sbjct: 695 MLDAGCDP 702



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 197/397 (49%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P   TY  I+ ALF   +  E  DL ++M+++   PN  TY ++V   CK   L E+ 
Sbjct: 315 CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESR 374

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R+++ M +   +P V TYN LI G+C  G +E A  +   MES    P+  TYN LI  F
Sbjct: 375 RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGF 434

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +     +A  L+ ++ E  + P+ VT+N +I   CK G  D A K++  ++ENG  PD 
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQ 494

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY+  ID  CK+  MEEA  + + +  KG+K N +    ++   C   K+DEA  LL  
Sbjct: 495 WTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLER 554

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                   +  +Y +LI G  ++ K    L + + M +  + P+  TY  +I  + + G 
Sbjct: 555 MHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGD 614

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A  + N+++  G  PD  T+   IH +C+ G V++A     +M+E    PD +T  +
Sbjct: 615 FDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTL 674

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           L+S   R G+   A    +  +  G       +N LI
Sbjct: 675 LISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 217/439 (49%), Gaps = 19/439 (4%)

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
           +L+   ++ ++   +K    V +YN L+          E  ++  E+    I PN  T N
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            M+  Y K G I +A   V  + + G SPD  TY +LI   C+  ++  A+++ ++M  K
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G + N ++  TI+H LC   ++DE   L     +   Y    +Y  +I   F +++    
Sbjct: 279 GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG 338

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L++EM+ER   P+  TY  M+  + +  K +++  +LNE+++ G++P   T+N +I G
Sbjct: 339 MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRG 398

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           +C EG++E AL+    M   + +P+  T N L+ G  +   + KA+    S +L+ K   
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLL-SKMLESKLTP 457

Query: 395 S-VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           S VTYN+LI   CK    + A+ LL  ++E  L PD++TY+     L +S R+EEA    
Sbjct: 458 SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           + + E G                 I  + + Y+  I+ HC  G+  +A+ + E    +  
Sbjct: 518 NSLKEKG-----------------IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDC 560

Query: 514 AINKSTYMNLMNGLIKRRK 532
             N STY +L+ G+ K  K
Sbjct: 561 LPNSSTYNSLIYGVCKEGK 579



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 218/450 (48%), Gaps = 17/450 (3%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           V +YN L+       M++E  R+  EM +  ++P++ T NT++N + + G  +EA   + 
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           ++ + G+ P++ T+  +I  YC+   ++ A K+   M   G   + V+Y T+I   C+AG
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++E   +   M          T   I+H L    +  E   L N   +R    +  +Y 
Sbjct: 299 RIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYT 358

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            ++    ++ K + + ++ +EM E+ ++PS  TYNA+I G  + G+ E A+++L  +  +
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESN 418

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
              P+E T+N +I GF     V KA+   +KM+E    P +VT N L+   C+ G  + A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            K        G   D  TY+  I +LCK +R+E+A  L + ++EK +  +   Y A+   
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             ++G+++EA      M                   E+  P+S +Y+  I   C +G+ +
Sbjct: 539 HCKAGKIDEAISLLERM-----------------HSEDCLPNSSTYNSLIYGVCKEGKVQ 581

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + L + E   + G+    +TY  L+  +++
Sbjct: 582 EGLSMVENMSKMGVKPTVATYTILIEEMLR 611



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 218/474 (45%), Gaps = 17/474 (3%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           +YN L+    +   + E  RV   M  +  +P+++T N ++N +   G + EA     ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
               L PD  TY +LI  +  +     A+K+ + +   G + N V++  +I   C+ G+I
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           D+   + + M E+   P   TY  +I A        E   + + M  +  + N  T   +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +  +C E+KLDE+  +LN   ++G     V+Y  LI GY  + +   AL++   M+    
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P+  TYN +I G S+     +A+ +L+++L+S + P   T+N++IH  C  G  + A +
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             + + E    PD  T ++ +  LC+   +E+A   F S   KG   + V Y  LI   C
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           K  ++++A  LL  M  +   P+  TY ++   + + G+++E       M + G      
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG------ 594

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                      + P+  +Y+  I E   +G +  A ++F +    G   +  TY
Sbjct: 595 -----------VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTY 637



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 35/363 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            C P+  TY  ++DA+ K+ KL+E R +L++M ++GLVP+  TYN L+ GYC+ G ++ A
Sbjct: 349 SCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAA 408

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGW---------------------------------- 90
           + ++ LM  N   P+  TYN LI G+                                  
Sbjct: 409 LEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHV 468

Query: 91  -CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C AG  + A++L   ++   L+PD  TY+  I+   +S R  EA  L + L E GIK N
Sbjct: 469 QCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN 528

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            V +  +I  +CK GKID+A  ++  M      P+  TYN+LI   CK G ++E   M++
Sbjct: 529 EVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVE 588

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M + G+K    T   ++  +  E   D A  + N     G+  D  +Y   I  Y    
Sbjct: 589 NMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSG 648

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               A  +   M E  +MP + TY  +I    + G    A ++L  +L +G  P    +N
Sbjct: 649 NVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWN 708

Query: 330 TII 332
            +I
Sbjct: 709 NLI 711



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 148/298 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C P+  TYN ++    K+  +++   LLS M +  L P+  TYN L+   CK G 
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A +++DL+ +N  +PD WTY++ I+  C +  +EEA  L   ++   +  + V Y  
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G+  EA  L++ +      PN+ T+N +I   CKEGK+ +   +V NM + G
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY  LI+   + G+ + A R+ + M   G K +  T    +HT C    + EA 
Sbjct: 595 VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAE 654

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            ++    + G   D ++Y  LI+ Y R   A  A  +   M +    PS   +N +IW
Sbjct: 655 GMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIW 712



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 53/285 (18%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S  +YN ++  L++    ++   +  E+L   ++P+  T NT+++ +   G + +A  + 
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           +K+ +    PD  T   L+ G CR   +  A K F     KG   + V+Y T+I  LC+ 
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 409 RRLEDA--------------------------FG---------LLSEMEEKKLGPDRYTY 433
            R+++                           FG         L +EM E+   P+ +TY
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +  A+ +  +L+E+++  + M+E G +                 PS ++Y+  I  +C
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLV-----------------PSVVTYNALIRGYC 400

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            +GR + AL+I           N+ TY  L+ G  K RK + KA+
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSK-RKHVHKAM 444


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 257/544 (47%), Gaps = 45/544 (8%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  NT++    ++G+++E   L+  M+ QGL PN  T+N  +S  CK G + EA R+ + 
Sbjct: 206 VVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFND 265

Query: 71  MT----QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           M     Q    PD  T++++++G+C+AGM++EA  L   M     L  V +YN  ++   
Sbjct: 266 MQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLV 325

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++GR  EA +L+ E+   G++PN+ T+NI++   CKEGK     ++   +     +PD V
Sbjct: 326 KNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVV 385

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +L+ A C  GN   A R++D M +KG   N  T N +L +L    +  E   LL   
Sbjct: 386 TYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERM 445

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALK----LWDEMK-------------------E 283
           S++GY LD  S   +I G  R+ K   A+     +W+E +                    
Sbjct: 446 SEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSIS 505

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           +  +P   TY+ ++  L + G+ ++A   L E++   + PD   ++T IHG+C  G+   
Sbjct: 506 KSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSL 565

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A++    M ++S  P   + N+L+ G   +   ++ LK       KG + + +TYN+LI 
Sbjct: 566 AIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIK 625

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           S C    +  A  LL EM + ++ P+  ++  +  A  ++     AQ+   + + T    
Sbjct: 626 SFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALST---- 681

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                              + Y     E  +  R+ +A  I E   +  I+I    Y  +
Sbjct: 682 --------------CGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRI 727

Query: 524 MNGL 527
           + GL
Sbjct: 728 IAGL 731



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 234/501 (46%), Gaps = 42/501 (8%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN  L  L K G++ E ++LLS+M  +G+ PN  TYNI+V G CK G   +  RV D +
Sbjct: 316 SYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFV 375

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 PDV TY  L++ +C+ G    A R+  EM      P++ TYN L+    ++GR+
Sbjct: 376 RSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRT 435

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG----------- 180
            E  +L++ + E G   +  + NI+I   C+  K++ A  IV  M   G           
Sbjct: 436 TEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSF 495

Query: 181 ------------FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
                         PD +TY+TL++A CK G  +EA + +  M  K +  +++  +T +H
Sbjct: 496 VSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIH 555

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C   K   A  +L    KR       SY  LI G+   +K++  LKL  EMKE+ I  
Sbjct: 556 GYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISS 615

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TYN++I      G   +A+ +L+E+LQ+ ++P+ T+F  +I  FC       A +  
Sbjct: 616 NVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF 675

Query: 349 NKMVEKSFKPDIVTCNIL--LSGLCR----EGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +  +    + +++ C +   LS   R    + ILE AL+   S       + S  Y  +I
Sbjct: 676 DVALSTCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRIS-------IQSFPYKRII 728

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           + LC     + A  LL     K    D  T+  +  AL ESG+  +A   +  M+E    
Sbjct: 729 AGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMMEIADC 788

Query: 463 N------HQVVQPNTSKTPEE 477
           N        VV P + K  ++
Sbjct: 789 NDGQSAVSGVVTPRSRKHEQD 809



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 255/552 (46%), Gaps = 52/552 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T N +L+AL   G+++  R +   M  +    N  +  IL  GYC+ G   +A
Sbjct: 138 GATPDVFTRNALLEALSAAGRMDLARRVFDAMPAR----NEFSSGILARGYCRAGRSADA 193

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+D M +     ++   N ++ G+C  G ++EA RL   M +  L P+VVT+N  I+ 
Sbjct: 194 LAVLDAMPEM----NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISA 249

Query: 125 FFESGRSMEAFKLIDELD---EHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
             ++GR +EA+++ +++    E G+ +P+ VT ++M+  +C  G +D+A  +V  M   G
Sbjct: 250 LCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGG 309

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F     +YN  +    K G + EA  ++  M  +G++ N+ T N I+  LC E K  +  
Sbjct: 310 FLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR 369

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +         D V+Y +L+  Y        A ++ DEM ++   P+ FTYN ++  L
Sbjct: 370 RVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSL 429

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--------- 351
            ++G+T +   +L  + + G   D  + N II G C   ++E A+   + M         
Sbjct: 430 LKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALR 489

Query: 352 --------------VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
                         + KS  PD +T + L++ LC+EG  ++A K     I K  + DSV 
Sbjct: 490 RLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVI 549

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y+T I   C   +   A  +L +ME++   P   +Y  +     E  + +E  K  S M 
Sbjct: 550 YDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMK 609

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           E G                 I  + ++Y+  I   C +G    A+ + +E  Q  I  N 
Sbjct: 610 EKG-----------------ISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNV 652

Query: 518 STYMNLMNGLIK 529
           +++  L+    K
Sbjct: 653 TSFGLLIKAFCK 664



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 249/522 (47%), Gaps = 54/522 (10%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G  P    YN L+    +   L     +   +    + PDV+T N L+     AG ++ A
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            R+   M +     +  +   L   +  +GRS +A  ++D + E     N V  N ++  
Sbjct: 163 RRVFDAMPA----RNEFSSGILARGYCRAGRSADALAVLDAMPEM----NLVVCNTVVAG 214

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG---RKGL 216
           +C+EG++D+A ++V  M   G +P+ VT+N  I A CKAG + EA+R+ + M     +GL
Sbjct: 215 FCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGL 274

Query: 217 -KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + + +T + +L   C    +DEA +L++     G+     SY   ++G  ++ +   A 
Sbjct: 275 PRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQ 334

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG-MIPDETTFNTIIHG 334
           +L  EM    + P+++TYN ++ GL + GK    +  + + ++SG M PD  T+ +++H 
Sbjct: 335 ELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFD-VRRVEDFVRSGVMTPDVVTYTSLLHA 393

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           +CS+G    A +  ++M +K   P++ T N+LL  L + G   +  +       KG ++D
Sbjct: 394 YCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLD 453

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEM------EEKKLG-----------------PDRY 431
           + + N +I  LC+  +LE A  ++  M        ++LG                 PDR 
Sbjct: 454 TASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRI 513

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY+ +  AL + GR +EA+K    M+  GK               +I P S+ Y   I+ 
Sbjct: 514 TYSTLMNALCKEGRFDEAKKKLVEMI--GK---------------DISPDSVIYDTFIHG 556

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +C  G+   A+++  +  ++    +  +Y  L+ G  +++KS
Sbjct: 557 YCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKS 598



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 193/473 (40%), Gaps = 74/473 (15%)

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F    S+ AF+ +  L   G  P    +N ++    +E ++D    + +++   G +PD 
Sbjct: 86  FPLAFSLSAFRSLRALG--GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDV 143

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVM------------------GRKG---------LKM 218
            T N L++A   AG M+ A R+ D M                  GR            +M
Sbjct: 144 FTRNALLEALSAAGRMDLARRVFDAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEM 203

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N +  NT++   C E ++DEA  L++    +G   + V++   I+   +  +   A +++
Sbjct: 204 NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIF 263

Query: 279 DEMKER-------------QIMPSTF--------------------------TYNAMIWG 299
           ++M+E               +M S F                          +YN  + G
Sbjct: 264 NDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSG 323

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+  +A ++L+E+   G+ P+  T+N I+ G C EG+     +  + +      PD
Sbjct: 324 LVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPD 383

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT   LL   C +G    A +       KG A +  TYN L+ SL K  R  +   LL 
Sbjct: 384 VVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLE 443

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI------NHQVVQPNTSK 473
            M EK    D  +   I   L  + +LE A      M   G++      N  V   + S 
Sbjct: 444 RMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSS 503

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
             +   P  I+YS  +N  C +GR+ +A +   E   K I+ +   Y   ++G
Sbjct: 504 ISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHG 556



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 1/278 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           CLPD +TY+T+++AL K+G+ +E +  L +M  + + P+   Y+  + GYC  G    A+
Sbjct: 508 CLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAI 567

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +V+  M +    P   +YN+LI G+      +E  +L  EM+   +  +V+TYN+LI  F
Sbjct: 568 KVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSF 627

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G   +A  L+DE+ ++ I PN  +  ++IK +CK      A ++  ++  +      
Sbjct: 628 CGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF-DVALSTCGQKE 686

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y  +           EA  +++      + + +     I+  LC   + D A+ LL  
Sbjct: 687 VLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKL 746

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
              +GY  D  ++  +I       K + A  L ++M E
Sbjct: 747 FIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMME 784


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 230/449 (51%), Gaps = 9/449 (2%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           MK++G  P   T N ++S   +L  ++ A      M + +   +V+T+N++IN  C  G 
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A      MES  + P +VTYNTL+  +   GR   A  +I E+   G +P+  T+N 
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNP 301

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++ W C EG+   A +++R M+  G  PD V+YN LI      G++E AF   D M ++G
Sbjct: 302 ILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQG 358

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           +     T NT++H L  E K++ A +L+    ++G  LD V+Y  +I GY +   A +A 
Sbjct: 359 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAF 418

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L DEM    I P+ FTY ++I+ L +  KT +A ++  +++  GM PD    NT++ G 
Sbjct: 419 ALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 478

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C+ G +++A     +M   +  PD VT N L+ GLC EG  E+A +       +G   D 
Sbjct: 479 CATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 538

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           ++YNTLIS   K+   + AF +  EM      P   TY A+   L ++   E A++    
Sbjct: 539 ISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLRE 598

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSIS 484
           M   G      + PN S     I+  S S
Sbjct: 599 MKSEG------IVPNDSSFCSVIEAMSKS 621



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 182/334 (54%), Gaps = 3/334 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  TYN IL  +  +G+ +EV   L +MK  GLVP+  +YNIL+ G    G 
Sbjct: 287 MKSKGFQPDLQTYNPILSWMCNEGRASEV---LREMKGIGLVPDSVSYNILIRGCSNNGD 343

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A    D M +   +P  +TYN LI+G      +E A  L +E+    ++ D VTYN 
Sbjct: 344 LETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 403

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN + + G + +AF L DE+   GIKP   T+  +I   C+  K  +A ++   +   G
Sbjct: 404 VINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKG 463

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V  NTL+D +C  GNM+ AF ++  M R  +  + +T N ++  LC E K +EA 
Sbjct: 464 MKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEAR 523

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+    +RG   D +SY TLI+GY +      A  + DEM      P+  TYNA++ GL
Sbjct: 524 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGL 583

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           S++   E A ++L E+   G++P++++F ++I  
Sbjct: 584 SKNQDGELAEELLREMKSEGIVPNDSSFCSVIEA 617



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 205/438 (46%), Gaps = 38/438 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   T N IL  L +  ++       +DM +  +  N  T+NI+++  CK G LK+A
Sbjct: 186 GFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 245

Query: 65  MRVVDLM---------------TQNKSL--------------------PDVWTYNMLING 89
              + +M                Q  SL                    PD+ TYN +++ 
Sbjct: 246 KGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSW 305

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            CN G   E  R   EM+ + L+PD V+YN LI     +G    AF   DE+ + G+ P 
Sbjct: 306 MCNEGRASEVLR---EMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPT 362

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+N +I     E KI+ A  ++R + E G   D VTYN +I+  C+ G+ ++AF + D
Sbjct: 363 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHD 422

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G+K    T  ++++ LC   K  EA  L      +G   D V   TL+ G+    
Sbjct: 423 EMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATG 482

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             +RA  L  EM    I P   TYN ++ GL   GK E+A +++ E+ + G+ PD  ++N
Sbjct: 483 NMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 542

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I G+  +G  + A    ++M+   F P ++T N LL GL +    E A +  R    +
Sbjct: 543 TLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSE 602

Query: 390 GKAVDSVTYNTLISSLCK 407
           G   +  ++ ++I ++ K
Sbjct: 603 GIVPNDSSFCSVIEAMSK 620



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 23/401 (5%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           + +  + M+++YC+   +D+A +    M+E GF P   T N ++    +   +E A+   
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M R  +K N  T N +++ LC E KL +A   L      G     V+Y TL+ GY   
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +   A  +  EMK +   P   TYN ++  +   G+   A ++L E+   G++PD  ++
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSY 331

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I G  + G +E A  + ++MV++   P   T N L+ GL  E  +E A    R    
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG  +DSVTYN +I+  C+    + AF L  EM    + P ++TY ++   L    +  E
Sbjct: 392 KGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTRE 451

Query: 449 AQKFTSIMVETGKINHQVVQPNT---------------SKTPE----EIDPSSISYSEKI 489
           A +    +V  G +   +V  NT               S   E     IDP  ++Y+  +
Sbjct: 452 ADELFEKVVGKG-MKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLM 510

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              C +G++++A ++  E +++GI  +  +Y  L++G  K+
Sbjct: 511 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 551



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 20/315 (6%)

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           +TI  + ++   C  + +DEA        ++G+     +   +++   R  +   A   +
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            +M   +I  + +T+N MI  L + GK ++A   L  +   G+ P   T+NT++ G+   
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G++E A    ++M  K F+PD+ T N +LS +C EG   +A +  R     G   DSV+Y
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSY 331

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           N LI        LE AF    EM ++ + P  YTY  +   L    ++E A+     + E
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                 I   S++Y+  IN +C  G  K A  + +E    GI   + 
Sbjct: 392 KG-----------------IVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQF 434

Query: 519 TYMNLMNGLIKRRKS 533
           TY +L+  L +R K+
Sbjct: 435 TYTSLIYVLCRRNKT 449



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 102/196 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TY +++  L ++ K  E  +L   +  +G+ P+    N L+ G+C  G +  A
Sbjct: 428 GIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRA 487

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +    PD  TYN L+ G C  G  EEA  L  EM+   + PD ++YNTLI+ 
Sbjct: 488 FSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 547

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G +  AF + DE+   G  P  +T+N ++K   K    + A +++R M+  G  P+
Sbjct: 548 YSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPN 607

Query: 185 CVTYNTLIDANCKAGN 200
             ++ ++I+A  K+ N
Sbjct: 608 DSSFCSVIEAMSKSDN 623


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 218/398 (54%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD   YN ++    K  ++     +L+ MK +G +P+  TYNI++   C    L  A+ V
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D +  +  +P V TY +LI      G + EA +L +EM +  LLPD+ TYN +I    +
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A +LI  L   G +P+ +++NI+++ +  +GK D+  K+V  M   G  P+ VT
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI + C+ G ++EA  ++ VM  K L  +T + + ++  LC E +LD A  +++   
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D V+Y T++    ++  AN+AL+++++++     P+  +YN MI  L   G   
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ M+  ++  G+ PDE T+N++I   C +G VE+A+   + M +  F+P +++ NI+L
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            GLC+   ++ A+  F   I KG   +  TY  LI  +
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 220/412 (53%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+   YN ++SG+CK+  ++ A +V++ M     LPD+ TYN++I   CN   L  A  +
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             ++     +P V+TY  LI      G   EA KL++E+   G+ P+  T+N +I+  CK
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           EG +++A +++ ++   G  PD ++YN L+ A    G  +E  +++  M  +G + N +T
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            + ++ +LC   ++DEA  +L    ++    D  SY  LI+   ++ + + A+ + D M 
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
               +P    YN ++  L ++G   QA+++ N+L   G  P+ +++NT+I    S G   
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL     M+ K   PD +T N L+S LCR+G++E+A+         G     ++YN ++
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             LCK RR++DA G+ +EM EK   P+  TY  +   +  +G   EA +  +
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELAN 556



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 5/425 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LPD VTYN ++ +L  + KL     +L  +     +P   TY IL+      G 
Sbjct: 173 MKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGG 232

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM++++ M     LPD++TYN +I G C  GM+E A  L   + S    PDV++YN 
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F   G+  E  KL+ E+   G +PN VT++I+I   C+ G+ID+A  +++ M E  
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  +Y+ LI A CK G ++ A  +MD M   G   + +  NTIL  LC     ++A 
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N     G   +  SY T+I+  +     +RAL +   M  + I P   TYN++I  L
Sbjct: 413 EIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCL 472

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+AI +L+++ QSG  P   ++N ++ G C   +++ A+    +M+EK  +P+ 
Sbjct: 473 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNE 532

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  +L+ G+   G   +A++   S   +    D ++ ++    L K   + D +  LS 
Sbjct: 533 TTYILLIEGIGFAGWRTEAMELANSLFSR----DVISQDSF-KRLNKTFPMLDVYKELSN 587

Query: 421 MEEKK 425
            E KK
Sbjct: 588 SETKK 592



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 238/479 (49%), Gaps = 22/479 (4%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L++  CK G   E++  ++ +      PDV     LI G+ N   +E+A R+ + +ES  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-H 142

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
             PDV  YN +I+ F +  +   A ++++ +   G  P+ VT+NIMI   C   K+  A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            ++  +  +   P  +TY  LI+A    G + EA ++++ M  +GL  +  T N I+  +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C E  ++ A  L+ S + +G   D +SY  L+  +    K +   KL  EM  R   P+ 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TY+ +I  L + G+ ++AI +L  +++  + PD  +++ +I   C EG+++ A+   + 
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL--CKE 408
           M+     PDIV  N +L+ LC+ G   +AL+ F      G   +  +YNT+IS+L  C +
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           R    A G++  M  K + PD  TY ++ + L   G +EEA      M ++G        
Sbjct: 443 R--SRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG-------- 492

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                      P+ ISY+  +   C   R  DA+ +F E  +KG   N++TY+ L+ G+
Sbjct: 493 ---------FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 211/436 (48%), Gaps = 31/436 (7%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+NR  ++G+  E+   ++ L   G  P+ +    +IK +     I+KA +++  +E + 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   YN +I   CK   +E A ++++ M  +G   + +T N ++ +LC  +KL  A 
Sbjct: 144 -EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+           ++Y  LI     +   N A+KL +EM  R ++P  +TYNA+I G+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  E+A +++  L   G  PD  ++N ++  F ++G+ ++  +   +M  +  +P+ 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT +IL+S LCR G +++A+   +  I K    D+ +Y+ LIS+LCKE RL+ A G++  
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------- 473
           M      PD   Y  I  AL ++G   +A +  +      K+      PN S        
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFN------KLRGMGCPPNVSSYNTMISA 436

Query: 474 -----------------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
                              + IDP  I+Y+  I+  C  G  ++A+ + ++  Q G    
Sbjct: 437 LWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 496

Query: 517 KSTYMNLMNGLIKRRK 532
             +Y  ++ GL K R+
Sbjct: 497 VISYNIVLLGLCKVRR 512



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 157/378 (41%), Gaps = 94/378 (24%)

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF---RDEKANRALKLWD 279
           L  +L+  C   K +E+   L     +GY  D +    LI G+F     EKA+R +++ +
Sbjct: 81  LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE 140

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS-- 337
              E    P  F YNA+I G  +  + E A  +LN +   G +PD  T+N +I   C+  
Sbjct: 141 SHTE----PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196

Query: 338 ---------------------------------EGQVEKALQFHNKMVEKSFKPDIVTCN 364
                                            EG + +A++   +M+ +   PD+ T N
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVD------------------------------ 394
            ++ G+C+EG++E+A +   S   KG   D                              
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316

Query: 395 -----SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
                 VTY+ LISSLC+  R+++A  +L  M EK+L PD Y+Y  + +AL + GRL+ A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 M+  G +                 P  ++Y+  +   C  G    AL+IF + R
Sbjct: 377 IGIMDYMISNGCL-----------------PDIVNYNTILAALCKNGNANQALEIFNKLR 419

Query: 510 QKGIAINKSTYMNLMNGL 527
             G   N S+Y  +++ L
Sbjct: 420 GMGCPPNVSSYNTMISAL 437



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 18/284 (6%)

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
           A  + Y   E     L+    +  K N +L   + +  +   P       +I G      
Sbjct: 69  AHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKN 128

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A  ++ E+L+S   PD   +N +I GFC   Q+E A Q  N+M  + F PDIVT NI
Sbjct: 129 IEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNI 187

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++  LC    L  AL      +L       +TY  LI +   E  + +A  LL EM  + 
Sbjct: 188 MIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 247

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L PD YTY AI   + + G +E A +                   TS T +  +P  ISY
Sbjct: 248 LLPDMYTYNAIIRGMCKEGMVERAAELI-----------------TSLTSKGCEPDVISY 290

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +    +QG++ +  ++  E   +G   NK TY  L++ L +
Sbjct: 291 NILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 334


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 254/518 (49%), Gaps = 17/518 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +   L +  KK + + V  L + M    +  N  + NIL++  C+L  +  ++ V
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +    PD  T+N LING CN G ++EA  L  EM      P+V++Y T+IN   +
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G +  A  +  +++++G KPN VT++ +I   CK+  ++ A + +  M E G  P+  T
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+++   C  G + EA R+   M  + +  NT+T   ++  LC E  + EA ++  + +
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   D  +Y  L+ GY      N A K+++ M  +   P   +YN +I G  +S + +
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L E+    + PD  T++T++ G C  G+ ++AL    +M      P++VT  ILL
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+ G L++ALK  +S   K    + V Y  LI  +    +LE A  L S++      
Sbjct: 451 DGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR 510

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY  +   L++ G  +EA      M + G +                 P+S SY+ 
Sbjct: 511 PDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL-----------------PNSCSYNV 553

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            I           A+++ +E   K  ++N ST+  L++
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 220/433 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +T+N +++ L  +GK+ E  +L ++M K+G  PN  +Y  +++G CK G 
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ V   M QN   P+V TY+ +I+  C   ++ +A     EM    + P+V TYN+
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ F   G+  EA +L  E+    + PN VT  I++   CKEG + +A  +   M E G
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN L+D  C    M EA ++ ++M RKG      + N +++  C  +++DEA 
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +    D V+Y TL+ G  +  +   AL L+ EM      P+  TY  ++ G 
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A+ +L  + +  + P+   +  +I G    G++E A +  +K+     +PDI
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDI 513

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  +++ GL +EG+ ++A   FR     G   +S +YN +I    + +    A  L+ E
Sbjct: 514 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 573

Query: 421 MEEKKLGPDRYTY 433
           M  K+   +  T+
Sbjct: 574 MVGKRFSVNLSTF 586



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 201/381 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTY+TI+D+L K   +N+  + LS+M ++G+ PN  TYN +V G+C LG 
Sbjct: 224 MEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA R+   M     +P+  T+ +L++G C  GM+ EA  + + M    + PD+ TYN 
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNA 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ +       EA K+ + +   G  P A ++NI+I  YCK  ++D+A  ++  M    
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY+TL+   C+ G  +EA  +   M   G   N +T   +L   C    LDEA 
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEAL 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S  ++    + V Y  LI G F   K   A +L+ ++      P   TY  MI GL
Sbjct: 464 KLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G +++A D+  ++   G +P+  ++N +I GF        A++  ++MV K F  ++
Sbjct: 524 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583

Query: 361 VTCNILLSGLCREGILEKALK 381
            T  +LL    ++ I+ + ++
Sbjct: 584 STFQMLLDLESQDEIISQFMR 604



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 213/435 (48%), Gaps = 18/435 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P VV +   +  F +  +      L +++D   +  N  + NI+I   C+   +D +  +
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +  M + G  PD +T+N LI+  C  G ++EA  + + M ++G + N I+  T+++ LC 
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
                 A  +     + G   + V+Y T+I    +D   N A++   EM ER I P+ FT
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN+++ G    G+  +A  +  E++   ++P+  TF  ++ G C EG V +A      M 
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           EK  +PDI T N L+ G C + ++ +A K F   I KG A  + +YN LI+  CK RR++
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF--------------TSIMVE 458
           +A  LL+EM  K L PD  TY+ +   L + GR +EA                 T +++ 
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450

Query: 459 TGKINH----QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            G   H    + ++   S   ++++P+ + Y+  I      G+ + A ++F +    G  
Sbjct: 451 DGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR 510

Query: 515 INKSTYMNLMNGLIK 529
            +  TY  ++ GL+K
Sbjct: 511 PDIRTYTVMIKGLLK 525



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 198/384 (51%), Gaps = 17/384 (4%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           +P+ V     +  + K+ +      +   M+    + +  + N LI+  C+  +++ +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           ++  M + G+  + IT N +++ LC E K+ EA  L N   KRG+  + +SY T+I G  
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +    + A+ ++ +M++    P+  TY+ +I  L +      A++ L+E+++ G+ P+  
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+N+I+HGFC+ GQ+ +A +   +MV +   P+ VT  IL+ GLC+EG++ +A   F + 
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             KG   D  TYN L+   C +R + +A  +   M  K   P  ++Y  +     +S R+
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           +EA+   S++ E   + H+ + P+T           ++YS  +   C  GR K+AL +F+
Sbjct: 390 DEAK---SLLAE---MYHKALNPDT-----------VTYSTLMQGLCQLGRPKEALNLFK 432

Query: 507 ETRQKGIAINKSTYMNLMNGLIKR 530
           E    G   N  TY+ L++G  K 
Sbjct: 433 EMCSYGPHPNLVTYVILLDGFCKH 456



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 151/276 (54%), Gaps = 17/276 (6%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V +G  +  + + ++ +  + L ++M   ++  + ++ N +I  L +    + ++ +L +
Sbjct: 94  VEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGK 153

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + + G+ PD  TFN +I+G C+EG++++A++  N+MV++  +P++++   +++GLC+ G 
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
              A+  F+     G   + VTY+T+I SLCK+R + DA   LSEM E+ + P+ +TY +
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           I       G+L EA +    MV                   ++ P++++++  ++  C +
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVG-----------------RDVMPNTVTFTILVDGLCKE 316

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           G   +A  +FE   +KG+  + STY  LM+G   +R
Sbjct: 317 GMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQR 352



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 17/191 (8%)

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           V+ AL    +MV  + +P +V     L    ++      +       L     +  + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           LI+ LC+   ++ +  +L +M +  + PD  T+ A+   L   G+++EA +  + MV+ G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                             +P+ ISY+  IN  C  G    A+ +F++  Q G   N  TY
Sbjct: 194 H-----------------EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTY 236

Query: 521 MNLMNGLIKRR 531
             +++ L K R
Sbjct: 237 STIIDSLCKDR 247


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 271/559 (48%), Gaps = 39/559 (6%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK---- 62
           +P     N +LDAL K+ +L+   D+   M ++ +V +  +Y +L+  +C+ G ++    
Sbjct: 186 VPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKD 245

Query: 63  -----------------EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
                            EA+ +   M+    +P   +YN+LI+G C    LE+A  L  E
Sbjct: 246 VLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVE 305

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M S+ L  D V Y+ LI+   +   +  A  L+ E+  HG   + + ++  I    KEG 
Sbjct: 306 MNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGA 365

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           ++KA  +   M   G +P    Y +LI+   +  N+ + + ++  + ++ + ++  T  T
Sbjct: 366 MEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGT 425

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
            +  +C    LD AY ++      G   + V Y TLI  + +  +   A+++  EM+E+ 
Sbjct: 426 AVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG 485

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I P TF YN++I GLS++ K ++A   L E++++G  PD  T+   I G+   G+   A 
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASAD 545

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           ++  +M+E    P+ V C  L++  C++G + +A   FRS + +G   D+ TY  L++ L
Sbjct: 546 KYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGL 605

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
            K  ++ DA  +  EM  K + PD ++Y  +     + G +++A      MV+ G  ++ 
Sbjct: 606 VKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNV 665

Query: 466 VV----------QPNTSKTPEEID--------PSSISYSEKINEHCSQGRYKDALQIFEE 507
           ++               K  E +D        P++++Y   I+ +C  G   +A Q+F+E
Sbjct: 666 IIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDE 725

Query: 508 TRQKGIAINKSTYMNLMNG 526
            + KG+  +   Y  L++G
Sbjct: 726 MKLKGLVPDSFVYTTLVDG 744



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 250/532 (46%), Gaps = 49/532 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ V Y T++    +K +  +   +L +M++QG+ P+   YN L+ G  K   
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA   +  M +N   PD +TY   I+G+  AG    A +  KEM    ++P+ V    
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + + G+ +EA      + E GI  +A T+ +++    K GK++ A +I   M   G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  +Y TLID   K GNM++A  + D M + GL  N I  N +L   C   ++++A 
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY------- 293
            LL+  S +G+  + V+Y T+I GY +      A +L+DEMK + ++P +F Y       
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745

Query: 294 ---------------------------NAMIWGLSQSGKTEQAIDMLNELLQSGM----I 322
                                      NA+I  + + GKTE   DM+N L+         
Sbjct: 746 CRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGK 805

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P++ T+N +I   C EG +E A +  + M + +  P ++T   LL+G  + G   +    
Sbjct: 806 PNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSV 865

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR-----YTYAAIH 437
           F   I  G   D++ Y+ +I++  KE     A  LL +M  K    D       T  A+ 
Sbjct: 866 FDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALL 925

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
           +   + G +E A+K    MV    I      P++S   E I+ S IS ++++
Sbjct: 926 SGFAKVGEMEVAEKVVENMVRLKYI------PDSSTVIELINESCISSNQRM 971



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 261/533 (48%), Gaps = 16/533 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y+  +  + K+G + + + L   M   G+ P    Y  L+ G+ +   +++   ++
Sbjct: 349 DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             + +   +   +TY   + G C++G L+ A+ + KEM +    P+VV Y TLI  F + 
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  +A +++ E+ E GI P+   +N +I    K  K+D+A   +  M ENGF PD  TY
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
              I    +AG    A + +  M   G+  N +    +++  C + K+ EA     S  +
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D  +Y  L+ G  ++ K N A +++ EM+ + I P  F+Y  +I G S+ G  ++
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQK 648

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  + +E++Q+G+  +   +N ++ GFC  G++EKA +  ++M  K F P+ VT   ++ 
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G C+ G L +A + F    LKG   DS  Y TL+   C+   +E A  +  E  EK    
Sbjct: 709 GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCAS 767

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
               + A+   + + G+ E     T+ M+      ++++  +  K  +   P+ ++Y+  
Sbjct: 768 SSAPFNALINWVFKFGKTE----LTTDMI------NRLMDGSFDKFGK---PNDVTYNIM 814

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK--RRKSISKAVD 539
           I+  C +G  + A ++F   ++  +     TY +L+NG  K  RR  +    D
Sbjct: 815 IDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFD 867



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/530 (23%), Positives = 233/530 (43%), Gaps = 62/530 (11%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNK-SLPDVWT-------------------YNML 86
           +++ L    C  G +++A  VV  M + K  + +VW+                   + +L
Sbjct: 99  SFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGIL 158

Query: 87  INGWCNAGMLEEA---FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           I+G+   G L+EA   F   K+++ L L+P +   N L++   +  R    + +   + E
Sbjct: 159 IDGYIEKGFLDEAVFVFSSTKDLD-LDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVE 217

Query: 144 HGIKPNAVTHNIMIKWYCKEG---------------------KIDKACKIVRNMEENGFS 182
             +  +  ++ ++I  +C++G                      +D+A ++ ++M   G  
Sbjct: 218 RNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLV 277

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P   +YN LID  CK   +E+A  ++  M   GL  + +  + ++  L   +  D A  L
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGL 337

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           ++     G+ +D + Y   I    ++    +A  L+D M    + P    Y ++I G  +
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
                +  ++L E+ +  ++    T+ T + G CS G ++ A     +M     +P++V 
Sbjct: 398 EKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVI 457

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+    ++     A++  +    +G A D+  YN+LI  L K +++++A   L EM 
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E    PD +TY A  +  +E+G    A K+   M+E G I                 P+ 
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVI-----------------PNK 560

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  +  INE+C +G+  +A   F    ++GI  +  TY  LMNGL+K  K
Sbjct: 561 VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 114/282 (40%), Gaps = 78/282 (27%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY TI+D   K G L E   L  +MK +GLVP+   Y  LV G C+L  
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750

Query: 61  LKEAM--------------------------------------RVVDLMTQNKSLPDVWT 82
           ++ A+                                      R++D        P+  T
Sbjct: 751 VERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVT 810

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           YN++I+  C  G LE A  L   M+   L+P V+TY +L+N + + GR  E F + DE+ 
Sbjct: 811 YNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVI 870

Query: 143 EHGIKPNAVTHNIMIKWYCKEG----------------KIDKACK--------------- 171
             GI+P+ + ++++I  + KEG                 +D  CK               
Sbjct: 871 AAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAK 930

Query: 172 ---------IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
                    +V NM    + PD  T   LI+ +C + N   A
Sbjct: 931 VGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMA 972



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 105/268 (39%), Gaps = 41/268 (15%)

Query: 293 YNAMIWGLSQSGKTEQAIDMLNEL--LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           +  +I G  + G  ++A+ + +    L   ++P     N ++       +++     +  
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILE---------------------KALKFFRSWILK 389
           MVE++   D+ +  +L+   CR+G ++                     +AL+  +S   K
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G      +YN LI  LCK++RLEDA  LL EM    L  D   Y+ +   L++    + A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 MV  G                 IDP  + Y   I     +G  + A  +F+   
Sbjct: 335 NGLVHEMVSHGF---------------SIDP--MMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKA 537
             G+      Y +L+ G   R K++ K 
Sbjct: 378 TFGVTPGARAYASLIEGFF-REKNVRKG 404


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 253/520 (48%), Gaps = 8/520 (1%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y T+++   K G++++  +LL +MK++G+  +   ++ L+ G C+ G + EA+     M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-----SLKLLPDVVTYNTLINRFFE 127
           +  S P+V TYN ++NG C A  ++E   L  +ME     S    PDV++Y+T+I+   +
Sbjct: 62  EECS-PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +A++    +   G  PN VT++ +I   CK  ++D+A  ++  ++     P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +++   + G   E   ++  M  KG  +N I  N +LH L    + ++A        
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + V+Y   + G  +  K + A ++  EM E ++ P   TY+++I G  ++G+ +
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A D+   ++    IP   TF T++HGF    +  +A + H  MV   F P + T N+L+
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             +C    +E AL+ +     K +  D+ TY  LI  LC+ RR+++A   L  ME   + 
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 420

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH--QVVQPNTSKTPEEIDPSSISY 485
           P+     A+   L + G ++EA      +VE  K     + V+       + + P   +Y
Sbjct: 421 PNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATY 480

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
              +   C   R   A+  FE+   +G A    TY  L+ 
Sbjct: 481 VAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIG 520



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 257/490 (52%), Gaps = 14/490 (2%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y  +++G+CK G + +A  ++D M +     DV  ++ LI G C  G ++EA    K M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE-----HGIKPNAVTHNIMIKWYCK 162
             +  P+V+TYNT++N   ++ R  E  +L D++++     HG +P+ ++++ +I   CK
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
             ++DKA +  + M   G +P+ VTY++LID  CK   ++EA+ ++  +  + +    + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            N +++    + K  E   LL    ++G+ ++ + +  ++   +++++  +A + ++ + 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           +    P+  TYN  + GL ++GK ++A  +L E+++S + PD  T+++II GFC  G+++
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           KA     +M+     P  VT   LL G        +A +     +  G      TYN L+
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM-----V 457
             +C    +E A  +  +M+ KK  PD  TYA +   L  + R++EA++F  +M     V
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 420

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
             G I H +V+    +   E+D  + S  + + E C  G   +A+++ E+   KG+  ++
Sbjct: 421 PNGAICHALVEVLCKQG--EVD-EACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDE 477

Query: 518 STYMNLMNGL 527
           +TY+ ++  L
Sbjct: 478 ATYVAVLRSL 487



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 221/456 (48%), Gaps = 16/456 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD ++Y+T++DAL K  ++++  +    M+  G  PN  TY+ L+ G CK+  + EA
Sbjct: 103 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEA 162

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  +     +P    YN ++NG+   G   E   L   M+      +++ +N +++ 
Sbjct: 163 YSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHA 222

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +++    +A +  + L + G KPN VT+N+ +   CK GK+D+A +I+  M E+  +PD
Sbjct: 223 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPD 282

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY+++ID  CKAG M++A  +   M       + +T  T+LH     KK  EA+ +  
Sbjct: 283 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 342

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+     +Y  L+      +    AL+++ +MK ++  P   TY  +I  L ++ 
Sbjct: 343 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRAR 402

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A + L+ +    ++P+    + ++   C +G+V++A    + +VE           
Sbjct: 403 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------- 451

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
                +C+ G  ++A++     +LKG   D  TY  ++ SLC   R++ A     +M  +
Sbjct: 452 -----ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASR 506

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
              P   TY  +      +   ++A +    MV  G
Sbjct: 507 GCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAG 542



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 177/369 (47%), Gaps = 18/369 (4%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +GFG   + + +N +L AL+K  +  +       + K G  PN  TYN+ V G CK G +
Sbjct: 207 KGFGI--NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKV 264

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            EA R++  M ++K  PDV TY+ +I+G+C AG +++A  +   M   + +P  VT+ TL
Sbjct: 265 DEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 324

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++ F E  +S EAF++ +++   G  P   T+N+++   C    ++ A +I   M+    
Sbjct: 325 LHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR 384

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD  TY  LI   C+A  ++EA   +DVM    +  N    + ++  LC + ++DEA  
Sbjct: 385 QPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 444

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L++                +    +  + + A+++ ++M  + + P   TY A++  L 
Sbjct: 445 VLDN----------------VVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLC 488

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
              + + AI    ++   G  P   T+  +I   CS    + A +    MV   F P   
Sbjct: 489 GLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQ 548

Query: 362 TCNILLSGL 370
           T   L S L
Sbjct: 549 TMRTLSSCL 557



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 176/386 (45%), Gaps = 58/386 (15%)

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +  +I  +CK G++D+A +++  M+E G   D + ++TLI   C+ G ++EA      MG
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR-----GYYLDEVSYGTLITGYFR 267
            +    N IT NT+++ LC   ++DE   L +   KR     G   D +SY T+I    +
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
            ++ ++A + +  M+     P+  TY+++I GL +  + ++A  +L +L    M+P    
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +N +++GF  +G+  + L+    M EK F  +I+  N +L  L +    EKA +FF   +
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             GK  + VTYN  +  LCK                                   +G+++
Sbjct: 241 KSGKKPNVVTYNVAVHGLCK-----------------------------------AGKVD 265

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           EA +    MVE+                 ++ P  I+YS  I+  C  GR   A  +F  
Sbjct: 266 EAYRILLEMVES-----------------KVTPDVITYSSIIDGFCKAGRMDKADDVFTR 308

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRKS 533
                   +  T+M L++G  + +KS
Sbjct: 309 MMVHECIPHPVTFMTLLHGFSEHKKS 334


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 260/519 (50%), Gaps = 22/519 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V +N +L A+ K  K   V  L   M+  G+  +  TY+I ++ +C+   L  A+ 
Sbjct: 80  FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD+ T + L+NG+C++  + +A  L  +M  +   PD  T+ TLI+  F
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  L+D++ + G +P+ VT+  ++   CK G ID A  ++  ME      + V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            +NT+ID+ CK  ++E A  +   M  KG++ N +T N++++ LC   +  +A  LL++ 
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++    + V++  LI  +F++ K   A KL +EM +R I P T TYN +I G     + 
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  M   ++    +P+  T+NT+I+GFC   +VE  ++   +M ++    + VT   +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  + G  + A   F+  +      D +TY+ L+  LC   +L+ A  +   +++ ++
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499

Query: 427 GPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             + + Y  +   + ++G++ EA   F S+                      I P  ++Y
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---------------------SIKPDVVTY 538

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           +  I+  CS+   ++A  +F + ++ G   N  TY  L+
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 242/519 (46%), Gaps = 20/519 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D  TY+  ++   ++ +L+    +L+ M K G  P+  T + L++GYC    
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +VD M +    PD +T+  LI+G        EA  L  +M      PD+VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   + G    A  L+++++   IK N V  N +I   CK   ++ A  +   ME  G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYN+LI+  C  G   +A R++  M  K +  N +T N ++     E KL EA 
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     +R    D ++Y  LI G+    + + A +++  M  +  +P+  TYN +I G 
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + E  +++  E+ Q G++ +  T+ TII GF   G  + A     +MV      DI
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T +ILL GLC  G L+ AL  F+        ++   YNT+I  +CK  ++ +A+ L   
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           +  K   PD  TY  + + L     L+EA      M E G +                 P
Sbjct: 529 LSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL-----------------P 568

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           +S +Y+  I  +        + ++ +E R  G   + ST
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 246/508 (48%), Gaps = 52/508 (10%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           K+++  DL  DM K    P+   +N L+S   K+   +  + + + M       D++TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           + IN +C    L  A  +  +M  L   PD+VT ++L+N +  S R  +A  L+D++ E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G KP+  T   +I       K  +A  +V  M + G  PD VTY T+++  CK G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +++ M    +K N +  NTI+ +LC  + ++ A                         
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA------------------------- 277

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                     + L+ EM+ + I P+  TYN++I  L   G+   A  +L+ +L+  + P+
Sbjct: 278 ----------VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             TFN +I  F  EG++ +A + H +M+++S  PD +T N+L++G C    L++A + F+
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + K    +  TYNTLI+  CK +R+ED   L  EM ++ L  +  TY  I     ++G
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
             + AQ     MV             +++ P +I    ++YS  ++  CS G+   AL I
Sbjct: 448 DCDSAQMVFKQMV-------------SNRVPTDI----MTYSILLHGLCSYGKLDTALVI 490

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           F+  ++  + +N   Y  ++ G+ K  K
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGK 518



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 196/409 (47%), Gaps = 17/409 (4%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L NR  +  +  +A  L  ++ +    P+ V  N ++    K  K +    +   M+  G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D  TY+  I+  C+   +  A  ++  M + G + + +TL+++L+  C  K++ +A 
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   + GY  D  ++ TLI G F   KA+ A+ L D+M +R   P   TY  ++ GL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  + A+++LN++  + +  +   FNTII   C    VE A+    +M  K  +P++
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L++ LC  G    A +   + + K    + VT+N LI +  KE +L +A  L  E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++ + PD  TY  +        RL+EA++    MV                  ++  P
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-----------------KDCLP 396

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  +Y+  IN  C   R +D +++F E  Q+G+  N  TY  ++ G  +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 20/284 (7%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K + A+ L+ +M + +  PS   +N ++  +++  K E  I +  ++   G+  D  T++
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
             I+ FC   Q+  AL    KM++  ++PDIVT + LL+G C    +  A+      +  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   D+ T+ TLI  L    +  +A  L+ +M ++   PD  TY  +   L + G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 450 QKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKIN 490
               + M E  +I   VV  NT                       + I P+ ++Y+  IN
Sbjct: 243 LNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             C+ GR+ DA ++     +K I  N  T+  L++   K  K +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 229/443 (51%), Gaps = 4/443 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDL--LSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           F C     ++N++L+ + ++G  +   +        K  + PN  ++N+++   CKLG +
Sbjct: 129 FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV 188

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A+ V   M   K  PDV+TY  L++G C    ++EA  L  EM+     P  VT+N L
Sbjct: 189 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 248

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN   + G  +   KL+D +   G  PN VT+N +I   C +GK+DKA  ++  M  +  
Sbjct: 249 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 308

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTY TLI+   K G   +   ++  +  +G   N    +T++  L  E+K +EA  
Sbjct: 309 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 368

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L     ++G   + V Y  LI G  R+ K + A ++  EM  +   P+ FTY+++I G  
Sbjct: 369 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 428

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G +++AI +  E+ ++  +P+E  ++ +IHG C +G++ +A+     M+ +  +PD+V
Sbjct: 429 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 488

Query: 362 TCNILLSGLCREGILEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             + ++ GLC  G +E  LK F   + +      D VTYN L+ +LCK+  +  A  LL+
Sbjct: 489 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 548

Query: 420 EMEEKKLGPDRYTYAAIHTALVE 442
            M ++   PD  T      AL E
Sbjct: 549 SMLDRGCNPDLITCNIFLNALRE 571



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 248/462 (53%), Gaps = 8/462 (1%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+V ++N++I   C  G+++ A  + +EM   K  PDV TY TL++   +  R  EA  L
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G  P++VT N++I   CK+G + +  K+V NM   G  P+ VTYNT+I+  C 
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A  ++D M       N +T  T+++ L  + +  +   LL+S  +RG++ +E +
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI+G F++EK+  A+ LW +M E+   P+   Y+A+I GL + GK ++A ++L E++
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G  P+  T++++I GF   G  +KA++   +M + +  P+ +  ++L+ GLC +G L 
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAA 435
           +A+  +   + +G   D V Y+++I  LC    +E    L +EM  +E    PD  TY  
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT--SKTPEEIDPSSIS---YSEKIN 490
           +  AL +   +  A    + M++ G  N  ++  N   +   E+++P         E + 
Sbjct: 530 LLRALCKQNSISHAIDLLNSMLDRG-CNPDLITCNIFLNALREKLNPPQDGREFLDELVV 588

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               + R   A +I E   QK +  N ST+  ++  L K +K
Sbjct: 589 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 630



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 246/500 (49%), Gaps = 25/500 (5%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           +T+  L+  Y   G      +V D M + + +     + ++   +  A + E+A  L   
Sbjct: 65  STFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGR 124

Query: 106 M-ESLKLLPDVVTYNTLINRFFESG---RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           M +  +    V ++N+++N   + G   R++E ++      +  I PN ++ N++IK  C
Sbjct: 125 MVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE-CGVGGKTNISPNVLSFNLVIKAMC 183

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           K G +D+A ++ R M      PD  TY TL+D  CK   ++EA  ++D M  +G   +++
Sbjct: 184 KLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSV 243

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +++ LC +  +     L+++   +G   +EV+Y T+I G     K ++A+ L D M
Sbjct: 244 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 303

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
              + +P+  TY  +I GL + G++   + +L+ L + G   +E  ++T+I G   E + 
Sbjct: 304 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 363

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           E+A+    KMVEK  +P+IV  + L+ GLCREG L++A +     + KG   ++ TY++L
Sbjct: 364 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 423

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I    K    + A  +  EM +    P+   Y+ +   L E G+L EA    + M+  G 
Sbjct: 424 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG- 482

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE--TRQKGIAINKST 519
                           + P  ++YS  I+  C+ G  +  L++F E   ++     +  T
Sbjct: 483 ----------------LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 526

Query: 520 YMNLMNGLIKRRKSISKAVD 539
           Y  L+  L K + SIS A+D
Sbjct: 527 YNILLRALCK-QNSISHAID 545



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 135/255 (52%), Gaps = 23/255 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ V Y+ ++D L ++GKL+E +++L +M  +G  PN  TY+ L+ G+ K G  ++A
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +RV   M +N  +P+   Y++LI+G C  G L EA  +   M    L PDVV Y+++I+ 
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496

Query: 125 FFESGRSMEAFKLIDEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
              +G      KL +E+   E   +P+ VT+NI+++  CK+  I  A  ++ +M + G +
Sbjct: 497 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 556

Query: 183 PDCVTYNTLIDANCKAGNMEE---------------------AFRMMDVMGRKGLKMNTI 221
           PD +T N  ++A  +  N  +                     A ++++VM +K L  N  
Sbjct: 557 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 616

Query: 222 TLNTILHTLCCEKKL 236
           T   I+  LC  KK+
Sbjct: 617 TWERIIPELCKPKKV 631


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 217/393 (55%), Gaps = 8/393 (2%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           TYN LI G+C AG +E AF+L  EM+     PDVVT+++++     +G    A +   E 
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            E    P++V  NI++   CK  ++ +A +++  M E G  PD VTYN+LID  CK+  M
Sbjct: 167 VE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           EEA ++++ M ++ ++ N +T NT+++  C       A+ L+    + G + D V++ +L
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I+G+ +  K ++A ++   MK+    P+  TYN +I GL  +G+  +A ++L+E+   G+
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD  T+N++I  FC   Q+E+A Q  N MVE+   PD ++   L   L +    ++A  
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
              +    G   +  T+N+L+  LC  RRL++A  LL+ M      P   TY  + T L 
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           ++GR+++A++   +MV  G      +QP  S +
Sbjct: 465 KAGRVDDAKEVLVMMVSEG------IQPLVSSS 491



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 222/396 (56%), Gaps = 4/396 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT+++I+ AL   G L+       +  +    P+   +NILV G CK   L EA ++
Sbjct: 138 PDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQM 195

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M++   +PDV TYN LI+G C +  +EEA +L + M   K+ P++VTYNTLI  + +
Sbjct: 196 IEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCK 255

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G +  A +LI+ + + G  P+ VT N +I  +C++ KIDKAC+++  M++   +P+ VT
Sbjct: 256 TGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVT 315

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI   C AG   EA  ++  M  +G+  + IT N+++   C   ++++A+ + N   
Sbjct: 316 YNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMV 375

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RG   D +SY TL     + E+ + A  L D M +   +P+ FT+N+++ GL  S + +
Sbjct: 376 ERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLD 435

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L  + + G  P  +T+  ++ G C  G+V+ A +    MV +  +P + +   ++
Sbjct: 436 EARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIV 495

Query: 368 SGLCREGILEKALKFFRSWI-LKGKAVDSVTYNTLI 402
             L REG  + AL +F   +  + KA D  +Y  L+
Sbjct: 496 HTLAREGKQDLALHYFDQVVAAESKACDP-SYQKLL 530



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 218/416 (52%), Gaps = 24/416 (5%)

Query: 117 TYNTLINRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           T N L+    ++ R  +A+++  DEL       N +T+N +I  +CK G +++A +++  
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM--NTITLNTILHTLCCE 233
           M+E G SPD VT+++++ A C  GN+  A +      R+ ++   +++  N ++H LC  
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF----RESVECAPDSVLFNILVHGLCKA 186

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            +L EA  ++   S+RG   D V+Y +LI G  +  +   A +L + M +R++ P+  TY
Sbjct: 187 NQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTY 246

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I+G  ++G T  A  ++  ++QSG  PD  TFN++I GFC + +++KA +  + M +
Sbjct: 247 NTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK 306

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
               P++VT N+L+SGLC  G   +A +       +G   D +TYN+LI   C+  ++E 
Sbjct: 307 GLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQ 366

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           AF + + M E+ + PD  +Y  +  AL++S R +EA      M + G I           
Sbjct: 367 AFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAI----------- 415

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 P+  +++  +   C   R  +A  +    R+ G     STY  L+ GL K
Sbjct: 416 ------PNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK 465



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 20/347 (5%)

Query: 187 TYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           T N L+    KA    +A+++  D +  +    N IT NT++   C    ++ A+ LL  
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +RG+  D V++ +++         +RA++ + E  E    P +  +N ++ GL ++ +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQ 188

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  M+ E+ + G++PD  T+N++I G C   ++E+A Q    MV++  +P++VT N 
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G C+ G    A +     I  G   D VT+N+LIS  C++ +++ A  +L  M++  
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  TY  + + L ++GR  EA +  S M   G                 I P  I+Y
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG-----------------ILPDIITY 351

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  I   C   + + A QI     ++G+  +  +Y  L   L+K  +
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSER 398



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 21/250 (8%)

Query: 291 FTYNAMIWGLSQSGKTEQAIDML-NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           FT N ++  L ++ +  QA  +  +ELL      +  T+NT+I GFC  G +E+A Q   
Sbjct: 70  FTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLA 129

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M E+   PD+VT + ++  LC  G L +A+++FR  +    A DSV +N L+  LCK  
Sbjct: 130 EMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV--ECAPDSVLFNILVHGLCKAN 187

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +L +A  ++ EM E+ + PD  TY ++   L +S R+EEA++    MV+           
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVK----------- 236

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  ++ P+ ++Y+  I  +C  G    A Q+ E   Q G   +  T+ +L++G  +
Sbjct: 237 ------RKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290

Query: 530 RRKSISKAVD 539
           + K I KA +
Sbjct: 291 KSK-IDKACE 299


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 237/470 (50%), Gaps = 6/470 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VT +T++  +  +GK+ +  +L   M + G   +   Y  L++   K    + A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M       + +TY ++I+  C  G+  +  ++ +EM ++ + P+V+ Y++LIN 
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  EA  L DE+   GIK N +T+N +I   C+ G   +A +    M   G  PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+ TLID   K G ++EA+++ ++M ++G   N +T N++L+ LC   ++D A  L  
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG  +D +SY TLI GY    K   A+ L+ +M+  ++ PS  TY  ++  L Q+G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A ++ N +   G  P   T+  ++ G C  G +E+A+     +    +KP I   +
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYS 363

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ G+ +    E A++ F      G   + VTYN +I+ LCKE +L +A  L  +MEE 
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEES 423

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
               D  ++  I    ++  ++++A +F   M E          PN S T
Sbjct: 424 GCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKN------FSPNDSVT 467



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 229/488 (46%), Gaps = 17/488 (3%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           K G  PN  T + LV G C  G + +A+ + D MT++    D+  Y  LIN         
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
            A  L + M S     +  TY  +I+   + G +++  K+  E+   GI PN + ++ +I
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              C+ GK+ +A  +   M   G   + +TYN+LI A+C+ G  +EA R    M  +G+ 
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            + +T  T++  L  + K+ EAY +     K+G   + V+Y +L+ G     + + A++L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           ++ M ER I     +YN +I G   SGKTE+A+ +  ++    + P  TT+  ++     
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G++  A +  N M      P + T  +LL GLC+ G +E+A+  FRS            
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y+ LI  + + RR E A  +  E+    L P+  TY  +   L + G+L EA++    M 
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQME 421

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
           E+G                  +   IS++  I     + + + A++  +  R+K  + N 
Sbjct: 422 ESG-----------------CEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND 464

Query: 518 STYMNLMN 525
           S  + L+N
Sbjct: 465 SVTLMLVN 472



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 187/359 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ + Y+++++ L + GKL E  +L  +M  QG+  N  TYN L+   C+ G 
Sbjct: 105 MINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGL 164

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA R    M     LPDV T+  LI+     G ++EA+++ + M      P++VTYN+
Sbjct: 165 WKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNS 224

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N      +   A +L + + E GIK + +++N +I  YC  GK ++A  + R M+   
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P   TY  L+ A  + G +  A  + + M   G   +  T   +L  LC    ++EA 
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +  S     Y      Y  LI G F+  +   A++++DE+    ++P+  TYN MI GL
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + GK  +A  +  ++ +SG   DE +FN II GF  E QV+KA++F  +M EK+F P+
Sbjct: 405 CKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 222/462 (48%), Gaps = 18/462 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P++ T + L+ G C  G + +A  L  +M       D++ Y  LIN   ++ ++  A +L
Sbjct: 7   PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
              +       N  T+ ++I   CK+G   K  K+ R M   G  P+ + Y++LI+  C+
Sbjct: 67  HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G + EA  + D M  +G+K N IT N+++H  C      EA    +     G   D V+
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           + TLI    +  K   A K+++ M ++   P+  TYN+++ GL    + + A+ +   ++
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G+  D  ++NT+I+G+C+ G+ E+A+    KM  +   P I T  ILL  L + G + 
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A + F +  + G++    TY  L+  LCK   +E+A  +   ++  K  P    Y+ + 
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             + ++ R E A +    +   G +                 P+ ++Y+  IN  C +G+
Sbjct: 367 GGMFQARRWESAMEIFDEIPTVGLV-----------------PNIVTYNIMINGLCKEGK 409

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
             +A ++F +  + G   ++ ++  ++ G ++  + + KA++
Sbjct: 410 LLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQ-VQKAME 450



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 196/406 (48%), Gaps = 18/406 (4%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G +PN VT + ++K  C EGK+  A ++   M  +GF  D + Y  LI+A  K      A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +   M  +    N  T   ++ +LC +    +   +       G   + + Y +LI G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             R  K   A+ L+DEM  + I  +  TYN++I    + G  ++A    ++++  G++PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             TF T+I     +G+V++A +    M+++   P+IVT N LL+GLC    ++ A++ F 
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + +G  +D ++YNTLI+  C   + E+A  L  +M+ ++L P   TY  +  AL ++G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 445 RLEEAQKFTSIMVETGKI----NHQVVQPNTSKT---PEEID-----------PSSISYS 486
           R+  A++  + M   G+      + V+     K     E ID           PS   YS
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYS 363

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I       R++ A++IF+E    G+  N  TY  ++NGL K  K
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGK 409



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 130/294 (44%), Gaps = 71/294 (24%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYN----------- 49
           M G G LPD VT+ T++D L KKGK+ E   +   M KQG  PN  TYN           
Sbjct: 175 MVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQ 234

Query: 50  ------------------------ILVSGYCKLGWLKEAMRVVDLMT------------- 72
                                    L++GYC  G  +EAM +   M              
Sbjct: 235 MDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTI 294

Query: 73  ------QNKSL----------------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
                 QN  +                P + TY +L++G C  G +EEA  + + ++S+K
Sbjct: 295 LLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIK 354

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
             P +  Y+ LI   F++ R   A ++ DE+   G+ PN VT+NIMI   CKEGK+ +A 
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAE 414

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN-TITL 223
           ++   MEE+G   D +++N +I    +   +++A   +  M  K    N ++TL
Sbjct: 415 RLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTL 468



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 17/279 (6%)

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K GY  + V+  TL+ G   + K   AL+L+D+M           Y  +I  L ++ +  
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+++   +L      +  T+  +I   C +G   K L+   +M+     P+++  + L+
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GLCR G L +A+  F   + +G   + +TYN+LI + C+    ++A    S+M  + + 
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  T+  +   L + G+++EA K   +M++ G+                  P+ ++Y+ 
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE-----------------APNIVTYNS 224

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            +N  C   +   A+++FE   ++GI I+  +Y  L+NG
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 20/230 (8%)

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           ++SG  P+  T +T++ G C EG+V  AL+  +KM    F+ DI+    L++ L +    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +A++  R  + +  + +  TY  +I SLCK+        +  EM    + P+   Y+++
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPN-------------------TSKTPEE 477
              L   G+L EA      MV  G I   V+  N                   +    E 
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQG-IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           I P  ++++  I+    +G+ ++A +IFE   ++G A N  TY +L+NGL
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   TY  +LD L K G + E  D+   +K     P+   Y+IL+ G  +   
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + AM + D +     +P++ TYN++ING C  G L EA RL  +ME      D +++N 
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNF 434

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           +I  F +  +  +A + +  + E    PN     +++  Y  + +
Sbjct: 435 IIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQ 479


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 255/533 (47%), Gaps = 23/533 (4%)

Query: 4   FGCL-PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            GC  P    YN +LDAL ++  +  V  +  +M+K G+ PN  TYN+L+   C+   + 
Sbjct: 62  LGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVD 121

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A +++D M++    PD  ++  +++G C  G +EEA     E      +P   +YN ++
Sbjct: 122 AARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVV 176

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +      R  E F +++E+ + G++PN VT+  ++  +CK  ++  AC I+  M   G +
Sbjct: 177 HALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 236

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ +T+  L+    + G + +A  M   M  +G   +TI+ N ++  LCC   L  A   
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            NS  +     +  +Y TL+ G+      + A+ +W+EMK     P+   Y  MI  L +
Sbjct: 297 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 356

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
               +QA  +++++L     P+  TFNT+I   C  G+V +AL   + M      P+  T
Sbjct: 357 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N LL GL REG  + A       +  G  +  VTYNT+I+ LC+    + A  LL  M 
Sbjct: 417 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMM 476

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + + PD +T+ AI  A  + G++  A                  Q N    P  +    
Sbjct: 477 VQGIQPDAFTFNAIIHAYCKEGKVSIAACLLG-------------QMNAVNCPRNV---- 519

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           ++Y+  I+E C+QG+  +A+    +   +GI  N++T+  L+  +     +I 
Sbjct: 520 VAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIG 572



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 228/460 (49%), Gaps = 5/460 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TYN ++ AL +  +++  R +L +M ++G  P+  ++  +VSG CKLG 
Sbjct: 95  MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 154

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA   +      +++P   +YN +++  C    + E F +  EM    L P+VVTY T
Sbjct: 155 VEEARGFLA-----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 209

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ F ++     A  ++  +   G  PN +T   ++K + ++GK+  A  +   M + G
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 269

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           ++P  ++YN LI   C  G+++ A    + M R  L  N  T +T++        LD A 
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 329

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++ N     G   + V Y  +I    +    ++A  L D+M      P+T T+N +I  L
Sbjct: 330 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 389

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+  +A+++ + + ++G  P++ T+N ++HG   EG  + A     +M+   F+  +
Sbjct: 390 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 449

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N +++ LC+  + + A+      +++G   D+ T+N +I + CKE ++  A  LL +
Sbjct: 450 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQ 509

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M       +   Y  + + L   G+L  A  +   M+  G
Sbjct: 510 MNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 549



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 241/541 (44%), Gaps = 40/541 (7%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG----WLKEAMRVVDLMTQN 74
            L   G ++ V+  L +M+ +G+          +  + + G     LK   R  DL  ++
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
              P V  YN L++      M+     +   M    + P+V TYN LI    ++ R   A
Sbjct: 67  ---PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAA 123

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV----TYNT 190
            K++DE+   G  P+ V+H  ++   CK G++++A          GF  + V    +YN 
Sbjct: 124 RKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA---------RGFLAETVPVQASYNA 174

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++ A C    M E F +++ M ++GL+ N +T  TI+   C  ++L  A  +L      G
Sbjct: 175 VVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG 234

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + +++  L+ G+F D K + AL +W  M +    PST +YN +I GL   G  + A+
Sbjct: 235 CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGAL 294

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           D  N + ++ ++P+ TT++T++ GF + G ++ A+   N+M     KP++V    ++  L
Sbjct: 295 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 354

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C++ + ++A       ++     ++VT+NTLI  LC   R+  A  +   M      P+ 
Sbjct: 355 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 414

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------------------- 471
            TY  +   L   G  ++A      M+  G     +V  NT                   
Sbjct: 415 RTYNELLHGLFREGNHKDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLG 473

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
               + I P + +++  I+ +C +G+   A  +  +        N   Y  L++ L  + 
Sbjct: 474 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 533

Query: 532 K 532
           K
Sbjct: 534 K 534



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 172/337 (51%), Gaps = 4/337 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ +T+  ++   F+ GK+++   +   M  +G  P+  +YN+L+ G C +G 
Sbjct: 230 MVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD 289

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK A+   + M +N  LP+  TY+ L++G+ NAG L+ A  +  EM+S    P+VV Y  
Sbjct: 290 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 349

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  LID++      PN VT N +I   C  G++ +A  +   M  NG
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKKLDE 238
             P+  TYN L+    + GN ++AF M+  M   G +++ +T NT+++ LC  C +K   
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRK--H 467

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A +LL     +G   D  ++  +I  Y ++ K + A  L  +M       +   Y  +I 
Sbjct: 468 AMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 527

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L   GK   A+  L ++L  G+ P+E T+N ++   
Sbjct: 528 ELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/431 (31%), Positives = 228/431 (52%), Gaps = 6/431 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY T++  L  + ++++   L + M+K G  PN  TY  L+ G C+ G +  A
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220

Query: 65  MRVVDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           +++   M  + SL      P V +Y+++I+  C     +EA  L +EM+   + P V++Y
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            +LI+ F   G+  EA +L +E+   G++PN VT N++I   CKEGK+ +A  ++  M +
Sbjct: 281 TSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQ 340

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+ +TYN+LI+  C  G++  A  +   M  KG + + I    +++  C   K++E
Sbjct: 341 RGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEE 400

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L N   + G   D  +YG L+TG F+  K   A KL+  MK   I    + Y   + 
Sbjct: 401 AMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLN 460

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++G   +A+++ N+L    +  D   FN +I G C  G++E A +   K+ ++  +P
Sbjct: 461 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 520

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+VT NI++   CR G + KA   F+     G   D +TY TLI    + ++LE    LL
Sbjct: 521 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 580

Query: 419 SEMEEKKLGPD 429
             M ++ +  D
Sbjct: 581 HMMVQRDVSLD 591



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 227/460 (49%), Gaps = 6/460 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T N +L+ L    ++ E   +++ + ++G +P+  TY  L+ G C    + +A
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPDVVTY 118
             +   M +    P+  TY  L+ G C  G +  A +L +EM        +   P V++Y
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + +I+   +  R  EA  L +E+   G+ P  +++  +I  +C  GK ++A ++   M  
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN 305

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+ VT+N LID  CK G + EA  +++VM ++G+  N +T N+++   C    L+ 
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L  S   +G   D + Y  LI GY +  K   A+KL++ M +    P   TY A++ 
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 425

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL Q GK   A  +   +   G+  D   +   ++G C  G + +A++  NK+   + K 
Sbjct: 426 GLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 485

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI   N L+ GLC+ G LE A + F     +    D VTYN +I   C+  ++  A  L 
Sbjct: 486 DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 545

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +ME+    PD+ TYA +     ES +LE+  +   +MV+
Sbjct: 546 QKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 224/459 (48%), Gaps = 6/459 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   ++  +L  L K    ++V  L + M+  G+ P+  T NIL++  C +  + E + V
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +   +PD+ TY  LI G C    + +A  L   M+ L   P+ +TY TL+     
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 128 SGRSMEAFKLIDEL----DEHGI--KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +G    A KL  E+      +GI  KP  ++++I+I   CK+ + D+A  +   M+  G 
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P  ++Y +LI   C  G  EEA R+ + M  +G++ N +T N ++  LC E K+ EA  
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL    +RG   + ++Y +LI G+      N A +L+  M  +   P    Y  +I G  
Sbjct: 334 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++ K E+A+ + N +LQ G  PD  T+  ++ G    G+V  A +    M       D+ 
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 453

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
              I L+GLC+ G L +A++ F         +D   +N LI  LCK  +LE A+ L  ++
Sbjct: 454 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 513

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            +++L PD  TY  +       G++ +A      M + G
Sbjct: 514 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 238/505 (47%), Gaps = 30/505 (5%)

Query: 56  CKLGWLK--EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           CK G +   +A +   LM  +   P + ++  L++G        + F L  +M    + P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D  T N L+N      R  E   ++  +   G  P+ VT+  +IK  C E +I KA  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG------LKMNTITLNTIL 227
             M++ G +P+ +TY TL+   C+ GN+  A ++   M           K   I+ + I+
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC +++ DEA  L      +G     +SY +LI G+    K   A +L++EM  + + 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+  T+N +I  L + GK  +A D+L  ++Q G++P+  T+N++I GFC  G +  A + 
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M  K  +PD++   +L++G C+   +E+A+K +   +  GK  D  TY  L++ L +
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK---------------- 451
             ++ DA  L   M+   +  D Y Y      L ++G L EA +                
Sbjct: 430 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 489

Query: 452 FTSI---MVETGKINHQVVQPNTSKTP-EEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           F  +   + + GK+  +       K P EE+ P  ++Y+  I+E C  G+   A  +F++
Sbjct: 490 FNCLIDGLCKAGKL--ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
             + G   +K TY  L+ G  + +K
Sbjct: 548 MEKNGCTPDKITYATLIRGFFESKK 572



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 182/353 (51%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  ++Y+ I+DAL K  + +E RDL  +MK QG+ P   +Y  L+ G+C  G  +EA R+
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRL 299

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      P+V T+N+LI+  C  G + EA  L + M    ++P+++TYN+LI  F  
Sbjct: 300 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A +L   +   G +P+ + + ++I  YCK  K+++A K+   M + G  PD  T
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+    + G + +A ++  VM   G+  +       L+ LC    L EA  L N   
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                LD   +  LI G  +  K   A +L++++ + ++ P   TYN MI    + G+  
Sbjct: 480 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 539

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +A  +  ++ ++G  PD+ T+ T+I GF    ++EK ++  + MV++    D+
Sbjct: 540 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 130/251 (51%), Gaps = 35/251 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TYN++++     G LN  R+L   M  +G  P+   Y +L++GYCK   ++EA
Sbjct: 342 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 401

Query: 65  MRVVDLMTQNKSLPDVWTYNMLI-----------------------------------NG 89
           M++ + M Q    PDV TY  L+                                   NG
Sbjct: 402 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 461

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C  G L EA  L  +++S  +  D+  +N LI+   ++G+   A++L ++L +  ++P+
Sbjct: 462 LCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPD 521

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+NIMI  +C+ G++ KA  + + ME+NG +PD +TY TLI    ++  +E+   ++ 
Sbjct: 522 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 581

Query: 210 VMGRKGLKMNT 220
           +M ++ + ++ 
Sbjct: 582 MMVQRDVSLDV 592


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 257/542 (47%), Gaps = 33/542 (6%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           + V  + +   L   GK  +   ++ +M  +G +P+ +TY+ ++   C    +  A  + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M  N  +PDV+TY +LI+ +C  G+L++A +   EM      P+VVTY  LI+ + ++
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC--- 185
            +   A +L + +   G  PN VT+  +I  +CK G+I+KAC+I   M  N   PD    
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 186 -------------VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
                         TY  L+D  CKA  ++EA  ++DVM  +G + N I  + ++   C 
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             KLDEA M+    S+RGY  +  +Y +LI   F+D++ + ALK+   M E    P+   
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  MI GL + GKT++A  +++ + + G  P+  T+  +I GF   G+V+K L+   +M 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K   P+ VT  +L++  C  G+L+ A +                Y  +I      R   
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFI 861

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            + GLL E+ E    P    Y  +  +  ++GRLE A +            H+ +   TS
Sbjct: 862 ISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALEL-----------HKXMSSCTS 910

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +  + D     YS  I       +   A +++ +  ++G     S +  L+ GLI+  +
Sbjct: 911 YSAADKD----LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966

Query: 533 SI 534
           ++
Sbjct: 967 TL 968



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 247/576 (42%), Gaps = 74/576 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y  ++  L +     E  D LS M+    +PN  TY IL+ G  +   L    R++
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR---- 124
            +M      P    +N LI+ +C +G    A++L K+M      P  V YN LI      
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 125 -------------------------------------FFESGRSMEAFKLIDELDEHGIK 147
                                                   +G+  +A+ +I E+   G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+  T++ +I   C   K+D A  +   M+ N   PD  TY  LID+ CK G +++A + 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D M R G   N +T   ++H     +K+  A  L       G   + V+Y  LI G+ +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 268 DEKANRALKLWDEMKERQIMPST----------------FTYNAMIWGLSQSGKTEQAID 311
             +  +A +++  M+    +P                  FTY A++ GL ++ K ++A D
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+ +   G  P+   ++ +I GFC  G++++A     KM E+ + P++ T + L+  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++  L+ ALK     +    A + + Y  +I  LCK  + ++A+ L+S MEEK   P+  
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY A+     ++G++++  +    M   G                   P+ ++Y   IN 
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKG-----------------CAPNFVTYRVLINH 820

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            C+ G   DA Q+ +E +Q     + + Y  ++ G 
Sbjct: 821 CCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 251/589 (42%), Gaps = 77/589 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++  G  P  +TYN ++    +  +L+    +  +M   G   +  T    V   CK G 
Sbjct: 223 LKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ +++   + +   D   Y  +I+G C A + EEA      M S   +P+VVTY  
Sbjct: 283 WREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRI 339

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+       +     +++  +   G  P+    N +I  YC+ G    A K+++ M + G
Sbjct: 340 LLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 181 FSPDCVTYNTLI--------------------------DAN---------------CKAG 199
             P  V YN LI                          DA+               C AG
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
             E+A+ ++  M  KG   +T T + ++  LC   K+D A++L           D  +Y 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI  + +     +A K +DEM      P+  TY A+I    ++ K   A ++   +L  
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--------VEKSFK--------PDIVTC 363
           G IP+  T+  +I G C  GQ+EKA Q + +M        V+  FK        P+I T 
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GLC+   +++A        ++G   + + Y+ LI   CK  +L++A  + ++M E
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +  GP+ YTY+++   L +  RL+ A K  S M+E                     P+ I
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-----------------SCAPNVI 742

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            Y+E I+  C  G+  +A ++     +KG   N  TY  +++G  K  K
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 192/386 (49%), Gaps = 20/386 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP----------------NRTTY 48
           GC+P+ VTY  ++D   K G++ +   + + M+    +P                N  TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             LV G CK   +KEA  ++D+M+     P+   Y+ LI+G+C  G L+EA  +  +M  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
               P+V TY++LI+R F+  R   A K++  + E+   PN + +  MI   CK GK D+
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +++  MEE G  P+ VTY  +ID   KAG +++   +M  MG KG   N +T   +++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C    LD+A+ LL+   +  +      Y  +I G+ R+     +L L DE+ E   +P
Sbjct: 820 HCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVP 877

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNEL--LQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
               Y  +I    ++G+ E A+++   +    S    D+  ++++I       +V+KA +
Sbjct: 878 IIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFE 937

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCR 372
            +  M+++   P++     L+ GL R
Sbjct: 938 LYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 230/528 (43%), Gaps = 51/528 (9%)

Query: 49  NILVSGYCKLG-W---LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK 104
           N+L+   C+ G W   L+E  R+ DL  +    P   TYN L+  +  A  L+ A+ + +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYK----PSRLTYNALVRVFLEADRLDTAYLVHR 256

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           EM       D  T    ++   ++GR  EA  LI++ +    K + V +  MI   C+  
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEAS 313

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
             ++A   +  M  +   P+ VTY  L+    +   +    R++ +M  +G   +    N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR------ALKLW 278
           +++H  C       AY LL      G     V Y  LI G   +EK         A K +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            EM +  ++ +    + +   L  +GK E+A  ++ E++  G IPD +T++ +I   C+ 
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
            +V+ A     +M      PD+ T  IL+   C+ G+L++A K+F   +  G A + VTY
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM-- 456
             LI +  K R++  A  L   M  +   P+  TY A+     +SG++E+A +  + M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 457 ------------VETGKIN-----------------HQVVQPN---TSKTPEEIDPSSIS 484
                       ++ G I                  H+V +        + E  +P+ I 
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y   I+  C  G+  +A  +F +  ++G   N  TY +L++ L K ++
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 35/193 (18%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTY  ++D   K GK+++  +L+  M  +G  PN  TY +L++  C  G 
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 61  LKEAMRVVDLMTQ---------------------------------NKSLPDVWTYNMLI 87
           L +A +++D M Q                                 N ++P +  Y +LI
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           + +C AG LE A  L K M S       D   Y++LI     + +  +AF+L  ++ + G
Sbjct: 887 DSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 146 IKPNAVTHNIMIK 158
             P       ++K
Sbjct: 947 GIPELSIFFYLVK 959


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 226/420 (53%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  V +N +L A+ K  K + V  L   M+  G+  +  T+NI+++ +C    +  A+ 
Sbjct: 82  FPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    PD  T   L+NG+C    + +A  L  +M  +   PD+V YN +I+   
Sbjct: 142 VLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLC 201

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++ R  +A     E+   GI+PN VT+  ++   C  G+ + A +++R+M +   +P+ +
Sbjct: 202 KTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVI 261

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY+ L+DA  K G + EA  + + M R  +  + +T +++++ LC   ++DEA  + +  
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + D VSY TLI G+ + ++    +KL+ +M +R ++ +T TYN +I G  Q G  
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A +  +++   G+ PD  T+N ++ G C  G +EKAL     M +     DIVT   +
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTV 441

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E A   F S  LKG   D VTY T++S LC +    +   L ++M+++ L
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 223/439 (50%), Gaps = 6/439 (1%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DVW 81
           KL++  +L  +M K    P+   +N L+S   K+   K+   V+ L  + + L    D++
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKM---KKYDVVISLGKKMEVLGIRNDLY 121

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N++IN +C    +  A  +  +M  L   PD VT  +L+N F    R  +A  L+D++
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            E G +P+ V +N +I   CK  +++ A    + +   G  P+ VTY  L++  C +G  
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            +A R++  M ++ +  N IT + +L       K+ EA  +     +     D V+Y +L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G    ++ + A +++D M  +   P   +YN +I G  ++ + E  + +  ++ Q G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           + +  T+NT+I GF   G V+KA +F ++M      PDI T NILL GLC  G+LEKAL 
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F         +D VTY T+I  +CK  ++EDA+GL   +  K L PD  TY  + + L 
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 442 ESGRLEEAQKFTSIMVETG 460
             G   E +   + M + G
Sbjct: 482 TKGLQHEVEALYTKMKQEG 500



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 204/375 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T+N +++      +++    +L  M K G  P+R T   LV+G+C+   
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNR 170

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +VD M +    PD+  YN +I+  C    + +A    KE+    + P+VVTY  
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N    SGR  +A +L+ ++ +  I PN +T++ ++  + K GK+ +A +I   M    
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY++LI+  C    ++EA +M D+M  KG   + ++ NT+++  C  K++++  
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+RG   + V+Y TLI G+F+    ++A + + +M    + P  +TYN ++ GL
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G  E+A+ +  ++ +S M  D  T+ T+I G C  G+VE A      +  K  KPDI
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDI 470

Query: 361 VTCNILLSGLCREGI 375
           VT   ++SGLC +G+
Sbjct: 471 VTYTTMMSGLCTKGL 485



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 228/458 (49%), Gaps = 17/458 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +   M + +  P +  +N L++        +    L K+ME L +  D+ T+N 
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN F    +   A  ++ ++ + G +P+ VT   ++  +C+  ++  A  +V  M E G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + PD V YN +ID+ CK   + +A      +GRKG++ N +T   +++ LC   + ++A 
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    KR    + ++Y  L+  + ++ K   A ++++EM    I P   TY+++I GL
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               + ++A  M + ++  G  PD  ++NT+I+GFC   +VE  ++   KM ++    + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L+ G  + G ++KA +FF      G + D  TYN L+  LC    LE A  +  +
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFED 425

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M++ ++  D  TY  +   + ++G++E+A                      S + + + P
Sbjct: 426 MQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFC-----------------SLSLKGLKP 468

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
             ++Y+  ++  C++G   +   ++ + +Q+G+  N S
Sbjct: 469 DIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDS 506



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 222/432 (51%), Gaps = 17/432 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L +A  L +EM   +  P +V +N L++   +  +      L  +++  GI+ +  T NI
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C   ++  A  ++  M + G+ PD VT  +L++  C+   + +A  ++D M   G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + + +  N I+ +LC  +++++A        ++G   + V+Y  L+ G     + N A 
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  +M +R+I P+  TY+A++    ++GK  +A ++  E+++  + PD  T++++I+G 
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   ++++A Q  + MV K   PD+V+ N L++G C+   +E  +K FR    +G   ++
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYNTLI    +   ++ A    S+M+   + PD +TY  +   L ++G LE+A      
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKAL----- 420

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                     V+  +  K+  E+D   ++Y+  I   C  G+ +DA  +F     KG+  
Sbjct: 421 ----------VIFEDMQKS--EMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKP 468

Query: 516 NKSTYMNLMNGL 527
           +  TY  +M+GL
Sbjct: 469 DIVTYTTMMSGL 480



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD V YN I+D+L K  ++N+  D   ++ ++G+ PN  TY  LV+G C  G 
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A R++  M + K  P+V TY+ L++ +   G + EA  + +EM  + + PD+VTY++
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN      R  EA ++ D +   G  P+ V++N +I  +CK  +++   K+ R M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + VTYNTLI    + G++++A      M   G+  +  T N +L  LC    L++A 
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKAL 420

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++     K    LD V+Y T+I G  +  K   A  L+  +  + + P   TY  M+ GL
Sbjct: 421 VIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGL 480

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G   +   +  ++ Q G++ +++           +G +  + +   KM+   + P +
Sbjct: 481 CTKGLQHEVEALYTKMKQEGLMKNDSMLCL------GDGDITISAELIKKMLSCGYAPSL 534

Query: 361 V 361
           +
Sbjct: 535 L 535



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 179/389 (46%), Gaps = 18/389 (4%)

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           ++ K+  A  + R M +    P  V +N L+ A  K    +    +   M   G++ +  
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N +++  CC  ++  A  +L    K GY  D V+ G+L+ G+ R  + + A+ L D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            E    P    YNA+I  L ++ +   A+D   E+ + G+ P+  T+  +++G C+ G+ 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             A +    M+++   P+++T + LL    + G + +A + F   +      D VTY++L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I+ LC   R+++A  +   M  K   PD  +Y  +     ++ R+E+  K    M + G 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 462 INHQVV---------QPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQ 503
           +N+ V          Q       +E         + P   +Y+  +   C  G  + AL 
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           IFE+ ++  + ++  TY  ++ G+ K  K
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 255/533 (47%), Gaps = 23/533 (4%)

Query: 4   FGCL-PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            GC  P    YN +LDAL ++  +  V  +  +M+K G+ PN  TYN+L+   C+   + 
Sbjct: 115 LGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVD 174

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A +++D M++    PD  ++  +++G C  G +EEA     E      +P   +YN ++
Sbjct: 175 AARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVV 229

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +      R  E F +++E+ + G++PN VT+  ++  +CK  ++  AC I+  M   G +
Sbjct: 230 HALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 289

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+ +T+  L+    + G + +A  M   M  +G   +TI+ N ++  LCC   L  A   
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 349

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            NS  +     +  +Y TL+ G+      + A+ +W+EMK     P+   Y  MI  L +
Sbjct: 350 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 409

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
               +QA  +++++L     P+  TFNT+I   C  G+V +AL   + M      P+  T
Sbjct: 410 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 469

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N LL GL REG  + A       +  G  +  VTYNT+I+ LC+    + A  LL  M 
Sbjct: 470 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMM 529

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + + PD +T+ AI  A  + G++  A                  Q N    P  +    
Sbjct: 530 VQGIQPDAFTFNAIIHAYCKEGKVSIAACLLG-------------QMNAVNCPRNV---- 572

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           ++Y+  I+E C+QG+  +A+    +   +GI  N++T+  L+  +     +I 
Sbjct: 573 VAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIG 625



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 228/460 (49%), Gaps = 5/460 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TYN ++ AL +  +++  R +L +M ++G  P+  ++  +VSG CKLG 
Sbjct: 148 MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 207

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA   +      +++P   +YN +++  C    + E F +  EM    L P+VVTY T
Sbjct: 208 VEEARGFLA-----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 262

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ F ++     A  ++  +   G  PN +T   ++K + ++GK+  A  +   M + G
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 322

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           ++P  ++YN LI   C  G+++ A    + M R  L  N  T +T++        LD A 
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 382

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++ N     G   + V Y  +I    +    ++A  L D+M      P+T T+N +I  L
Sbjct: 383 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 442

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+  +A+++ + + ++G  P++ T+N ++HG   EG  + A     +M+   F+  +
Sbjct: 443 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 502

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N +++ LC+  + + A+      +++G   D+ T+N +I + CKE ++  A  LL +
Sbjct: 503 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQ 562

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M       +   Y  + + L   G+L  A  +   M+  G
Sbjct: 563 MNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 602



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/540 (24%), Positives = 241/540 (44%), Gaps = 40/540 (7%)

Query: 20  LFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG----WLKEAMRVVDLMTQNK 75
           L   G ++ V+  L +M+ +G+          +  + + G     LK   R  DL  ++ 
Sbjct: 61  LAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD- 119

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P V  YN L++      M+     +   M    + P+V TYN LI    ++ R   A 
Sbjct: 120 --PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV----TYNTL 191
           K++DE+   G  P+ V+H  ++   CK G++++A          GF  + V    +YN +
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA---------RGFLAETVPVQASYNAV 228

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           + A C    M E F +++ M ++GL+ N +T  TI+   C  ++L  A  +L      G 
Sbjct: 229 VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGC 288

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + +++  L+ G+F D K + AL +W  M +    PST +YN +I GL   G  + A+D
Sbjct: 289 TPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALD 348

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
             N + ++ ++P+ TT++T++ GF + G ++ A+   N+M     KP++V    ++  LC
Sbjct: 349 FFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLC 408

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++ + ++A       ++     ++VT+NTLI  LC   R+  A  +   M      P+  
Sbjct: 409 KKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDR 468

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------------------S 472
           TY  +   L   G  ++A      M+  G     +V  NT                    
Sbjct: 469 TYNELLHGLFREGNHKDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLGR 527

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              + I P + +++  I+ +C +G+   A  +  +        N   Y  L++ L  + K
Sbjct: 528 MMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK 587



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 172/337 (51%), Gaps = 4/337 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ +T+  ++   F+ GK+++   +   M  +G  P+  +YN+L+ G C +G 
Sbjct: 283 MVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD 342

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK A+   + M +N  LP+  TY+ L++G+ NAG L+ A  +  EM+S    P+VV Y  
Sbjct: 343 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 402

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  LID++      PN VT N +I   C  G++ +A  +   M  NG
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--CEKKLDE 238
             P+  TYN L+    + GN ++AF M+  M   G +++ +T NT+++ LC  C +K   
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRK--H 520

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A +LL     +G   D  ++  +I  Y ++ K + A  L  +M       +   Y  +I 
Sbjct: 521 AMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 580

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L   GK   A+  L ++L  G+ P+E T+N ++   
Sbjct: 581 ELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 23/241 (9%)

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ-FHNKM 351
           + A +  L+ +G  +     L E+   G+   E      I  F   G  ++AL+ F+   
Sbjct: 54  HEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRAS 113

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
                 P +   N LL  L RE ++   +  + +    G   +  TYN LI +LC+  R+
Sbjct: 114 DLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRV 173

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           + A  +L EM  K   PD  ++  I + + + GR+EEA+ F +                 
Sbjct: 174 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA----------------- 216

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                E  P   SY+  ++  C + R  +   +  E  Q+G+  N  TY  +++   K R
Sbjct: 217 -----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAR 271

Query: 532 K 532
           +
Sbjct: 272 E 272


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 232/434 (53%), Gaps = 5/434 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKG---KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           F C     ++N++L+ + ++G   +  E  + +   K   + PN  T+N+++   CK+G 
Sbjct: 125 FECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGL 184

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+++   M  +K  PDV+TY  L++G C A  ++EA  L  EM+     P  VT+N 
Sbjct: 185 VDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 244

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G      KL+D +   G  PN VT+N +I   C +GK++KA  ++  M  + 
Sbjct: 245 LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 304

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY T+I+   K G   +  R++ +M  +G  +N    + ++  L  E K  EA 
Sbjct: 305 CVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAM 364

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    + +   L+ + Y  +I G  RD K + AL++  EM   +  P+ +TY++++ G 
Sbjct: 365 QLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGF 424

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G   +AI+M  ++ +     +E  ++ +IHG C +G+V++A+    +M+ K  KPD+
Sbjct: 425 FEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDV 484

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           V    +++GL   G++E AL+ +   + +      D VTYN L+++LCK+  +  A  LL
Sbjct: 485 VAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLL 544

Query: 419 SEMEEKKLGPDRYT 432
           + M ++   PD  T
Sbjct: 545 NSMLDRGCDPDLVT 558



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 218/385 (56%), Gaps = 2/385 (0%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+V T+N++I   C  G++++A ++ ++M   K  PDV TY TL++   ++ R  EA  L
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G  P+ VT N++I   CK+G + +  K+V NM   G +P+ VTYNTLI   C 
Sbjct: 227 LDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCL 286

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +E+A  ++D M       N +T  TI++ L  + +  +   +L    +RGY+++E  
Sbjct: 287 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYV 346

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI+G F++ K+  A++L+ EM  ++   +T  Y+A+I GL + GK ++A+++L+E+ 
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
            +   P+  T+++++ GF   G   KA++    M + +F  + V  ++L+ GLC++G ++
Sbjct: 407 NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAA 435
           +A+  +   + KG   D V Y ++I+ L     +EDA  L +EM  +E    PD  TY  
Sbjct: 467 EAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNI 526

Query: 436 IHTALVESGRLEEAQKFTSIMVETG 460
           +  AL +   +  A    + M++ G
Sbjct: 527 LLNALCKQSSISRAIDLLNSMLDRG 551



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 236/479 (49%), Gaps = 24/479 (5%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G    P+ +T+N ++  + K G +++   +  DM      P+  TY  L+ G CK   +
Sbjct: 161 KGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRI 220

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            EA+ ++D M  +   P   T+N+LING C  G L    +L   M      P+ VTYNTL
Sbjct: 221 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTL 280

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+     G+  +A  L+D +      PN VT+  +I    K+G+     +++  MEE G+
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             +   Y+ LI    K G  +EA ++   M  K  ++NTI  + ++  LC + K DEA  
Sbjct: 341 HVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALE 400

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L+  +      +  +Y +L+ G+F     ++A+++W +M +     +   Y+ +I GL 
Sbjct: 401 VLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLC 460

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV--EKSFKPD 359
           + GK ++A+ +  ++L  G  PD   + ++I+G  + G VE ALQ +N+M+  E   +PD
Sbjct: 461 KDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPD 520

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT---------------------Y 398
           +VT NILL+ LC++  + +A+    S + +G   D VT                      
Sbjct: 521 VVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFL 580

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIM 456
           + L+  L K +R+  A  ++  M +K L P   T+  +   L    +++ A QK  SI+
Sbjct: 581 DGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSIL 639



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 217/483 (44%), Gaps = 50/483 (10%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           +T+  L+  Y  LG  K   +V+D M   K +     + ++   +  A + E+A  L   
Sbjct: 61  STFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDR 120

Query: 106 ME-SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           M    +    V ++N+++N   + G    A     E   H I    V             
Sbjct: 121 MAYEFECKRTVKSFNSVLNVIIQEGLFYRAL----EFYNHVIGAKGVN------------ 164

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
                            SP+ +T+N +I   CK G +++A +M   M     + +  T  
Sbjct: 165 ----------------ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYC 208

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
           T++  LC   ++DEA  LL+     G +   V++  LI G  +     R  KL D M  +
Sbjct: 209 TLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLK 268

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+  TYN +I GL   GK E+AI +L+ ++ S  +P+  T+ TII+G   +G+    
Sbjct: 269 GCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDG 328

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +    M E+ +  +    + L+SGL +EG  ++A++ F+   +K   ++++ Y+ +I  
Sbjct: 329 ARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDG 388

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC++ + ++A  +LSEM   +  P+ YTY+++     E+G   +A +    M +     H
Sbjct: 389 LCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAK-----H 443

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
              Q            + + YS  I+  C  G+ K+A+ ++ +   KG   +   Y +++
Sbjct: 444 NFTQ------------NEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMI 491

Query: 525 NGL 527
           NGL
Sbjct: 492 NGL 494



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 142/294 (48%), Gaps = 21/294 (7%)

Query: 257 SYGTLITGYFRDEKANRALKLWDEM---KERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           S+ +++    ++    RAL+ ++ +   K   I P+  T+N +I  + + G  + A+ M 
Sbjct: 133 SFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMF 192

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
            ++  S   PD  T+ T++ G C   ++++A+   ++M      P  VT N+L++GLC++
Sbjct: 193 RDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 252

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G L +  K   +  LKG A + VTYNTLI  LC + +LE A  LL  M   K  P+  TY
Sbjct: 253 GDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 312

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETG-KINHQV-----------------VQPNTSKTP 475
             I   LV+ GR  +  +  ++M E G  +N  V                 +Q     T 
Sbjct: 313 GTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTV 372

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +E + ++I YS  I+  C  G+  +AL++  E        N  TY +LM G  +
Sbjct: 373 KECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFE 426



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 16/312 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   +   Y+ ++  LFK+GK  E   L  +M  +    N   Y+ ++ G C+ G 
Sbjct: 335 MEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGK 394

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ V+  MT N+  P+ +TY+ L+ G+  AG   +A  + K+M       + V Y+ 
Sbjct: 395 PDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSV 454

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--EE 178
           LI+   + G+  EA  +  ++   G KP+ V +  MI      G ++ A ++   M  +E
Sbjct: 455 LIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQE 514

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD VTYN L++A CK  ++  A  +++ M  +G   + +T    L TL   +KLD 
Sbjct: 515 PDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL--REKLD- 571

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                        +LD      L+    + ++   A K+ + M ++ + P   T+  ++ 
Sbjct: 572 ------PPQDGREFLD-----GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVE 620

Query: 299 GLSQSGKTEQAI 310
            L    K + AI
Sbjct: 621 DLCNPKKVQAAI 632



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 141/317 (44%), Gaps = 27/317 (8%)

Query: 242 LLNSASKRGYY-LDEVSYGTLITGYFRDEKANRALKLWDEMK--ERQIMPSTFTYNAMIW 298
           +  S  K G Y L + ++ +LI  Y          K+ D M+  +R ++   F      +
Sbjct: 46  IFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAY 105

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDET-TFNTIIHGFCSEGQVEKALQFHNKMVEK--- 354
           G  ++   E+A+ + + +           +FN++++    EG   +AL+F+N ++     
Sbjct: 106 G--KAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGV 163

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           +  P+++T N+++  +C+ G+++ A++ FR   +     D  TY TL+  LCK  R+++A
Sbjct: 164 NISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEA 223

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV-------- 466
             LL EM+     P   T+  +   L + G L    K    M   G   ++V        
Sbjct: 224 VSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHG 283

Query: 467 --VQPNTSKTPEEID--------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
             ++    K    +D        P+ ++Y   IN    QGR  D  ++     ++G  +N
Sbjct: 284 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVN 343

Query: 517 KSTYMNLMNGLIKRRKS 533
           +  Y  L++GL K  KS
Sbjct: 344 EYVYSALISGLFKEGKS 360


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 228/450 (50%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N IL  L KKG L E   L+  M +   +PN T    L+ G  ++G ++ A RV+
Sbjct: 21  DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M  +  +PDV TYNM++ G+C    L  A  L ++M      PDV+TYNT+I   F++
Sbjct: 81  KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  +A +        G  P  + + I+I+   K     +A +++ +M   G  PD VTY
Sbjct: 141 GKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTY 200

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N+L++   K G  E+A  ++  +   G++ N IT N++LH+LC     DE   +L    K
Sbjct: 201 NSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKK 260

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
             +    V+Y  LI G  +     RA+  + +M      P   TYN ++  L + G  ++
Sbjct: 261 TSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDE 320

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+ +   L  S   P   T+NT+I G    G +++AL+ +N+M+EK   PD +T   L+ 
Sbjct: 321 ALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVW 380

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G C    +E A++  R    +   ++S  Y  +I+ LC+ +R++ A  +L  M   +  P
Sbjct: 381 GFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKP 440

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           D   Y+ +  ++ ++G +EEA +    ++E
Sbjct: 441 DEEIYSTLIKSVADAGMVEEADELHQKLIE 470



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 210/416 (50%), Gaps = 17/416 (4%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T N +++   + G  MEA KLID +      PN+     +I+   + G+I++A ++++ M
Sbjct: 24  TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             +G  PD +TYN ++   CK   +  A  +++ M   G   + IT NTI+ +L    K 
Sbjct: 84  VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+A        +RG     + Y  LI   ++     RAL++ ++M      P   TYN++
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSL 203

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +   S+ GK E A  ++  +L  GM P+  T+N+++H  CS G  ++  +    M + S 
Sbjct: 204 VNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSH 263

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P +VT NIL++GLC+ G++E+A+ FF   + +  + D +TYNTL+++LCKE  +++A  
Sbjct: 264 PPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQ 323

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           +   + +    P   TY  +   L   G ++EA K  + M+E G                
Sbjct: 324 VFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKG---------------- 367

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            I P  I++   +   C   + +DA++I  E  ++   IN S Y  ++NGL + ++
Sbjct: 368 -IAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKR 422



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 218/420 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P++     ++  L + G++     +L  M   GLVP+  TYN++V G+CK   L+ A+ 
Sbjct: 54  IPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAID 113

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +++ M+ +   PDV TYN +I    + G  ++A    +       LP ++ Y  LI   +
Sbjct: 114 LLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVW 173

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +   ++ A ++++++   G  P+ VT+N ++ +  KEGK + A  I+ N+  +G  P+ +
Sbjct: 174 KHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAI 233

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN+L+ + C  G  +E   ++ +M +       +T N +++ LC    ++ A       
Sbjct: 234 TYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQM 293

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                  D ++Y TL+T   ++   + AL+++  + +    P   TYN +I GL++ G  
Sbjct: 294 VSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYM 353

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A+ + N++++ G+ PD  T  +++ GFC   QVE A++   +M ++  + +     ++
Sbjct: 354 DEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLV 413

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           ++GLCR   ++ A++     I      D   Y+TLI S+     +E+A  L  ++ E+K+
Sbjct: 414 INGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERKV 473



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 193/384 (50%), Gaps = 2/384 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +TYN ++    K+ +L    DLL DM   G  P+  TYN ++      G   +A
Sbjct: 87  GLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQA 146

Query: 65  MRVVDLMTQNKSLPDVWTYNMLIN-GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           +       +   LP +  Y +LI   W + G +  A  + ++M      PD+VTYN+L+N
Sbjct: 147 VEFWRGQLRRGCLPYLIPYTILIELVWKHCGTV-RALEVLEDMAIEGCYPDLVTYNSLVN 205

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G+  +A  +I  +  HG++PNA+T+N ++   C  G  D+  +I+  M++    P
Sbjct: 206 FASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPP 265

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VTYN LI+  CK G +E A      M  +    + IT NT+L  LC E  +DEA  + 
Sbjct: 266 TVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVF 325

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              S        ++Y T+I G  R    + ALKL+++M E+ I P   T+ +++WG    
Sbjct: 326 VLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWI 385

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + E A+++L E+ +     + + +  +I+G C   +V+ A+Q    M+   +KPD    
Sbjct: 386 DQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIY 445

Query: 364 NILLSGLCREGILEKALKFFRSWI 387
           + L+  +   G++E+A +  +  I
Sbjct: 446 STLIKSVADAGMVEEADELHQKLI 469



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 179/350 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD +TYNTI+ +LF  GK ++  +      ++G +P    Y IL+    K      A
Sbjct: 122 GCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRA 181

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V++ M      PD+ TYN L+N     G  E+A  +   + S  + P+ +TYN+L++ 
Sbjct: 182 LEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHS 241

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   E  +++  + +    P  VT+NI+I   CK G +++A      M     SPD
Sbjct: 242 LCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPD 301

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTL+ A CK G ++EA ++  ++         IT NT++  L     +DEA  L N
Sbjct: 302 IITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYN 361

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   D +++ +L+ G+   ++   A+++  EM +R    ++  Y  +I GL ++ 
Sbjct: 362 QMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNK 421

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           + + AI +L  ++     PDE  ++T+I      G VE+A + H K++E+
Sbjct: 422 RVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIER 471



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 146/283 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTYN++++   K+GK  +   ++ ++   G+ PN  TYN L+   C  G   E 
Sbjct: 192 GCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEV 251

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ +M +    P V TYN+LING C  G++E A     +M S    PD++TYNTL+  
Sbjct: 252 DEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTA 311

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA ++   L +    P  +T+N +I    + G +D+A K+   M E G +PD
Sbjct: 312 LCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPD 371

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+ +L+   C    +E+A  ++  MG++  ++N+     +++ LC  K++D A  +L 
Sbjct: 372 GITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLE 431

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
                 Y  DE  Y TLI           A +L  ++ ER+++
Sbjct: 432 MMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERKVL 474


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 253/525 (48%), Gaps = 21/525 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  +  TY  ++  L K+G++++ R LL +M  +G+VP+  TYN ++ GYCK G +K+A
Sbjct: 279 GCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 338

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +  LM QN   PD WTYN LI G C  G L+EA  L     +    P V+T+  LIN 
Sbjct: 339 LGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLING 397

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++ R  +A ++   +     K +   + ++I    K+ ++ +A + +  M  NG +P+
Sbjct: 398 YCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPN 457

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY ++ID  CK G +  A  +  +M  +G   N  T  ++++ L  +KKL +A  L+ 
Sbjct: 458 VVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G     ++Y TLI G  +  + + A +L++ M++  + P    YN +   L +SG
Sbjct: 518 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A      L++ G++  + T+ +++ GF   G  + A     KMV +  K D+ T +
Sbjct: 578 RAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +LL  LC++  L +AL       + G   + V Y  +IS + KE + + A  L +EM   
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P   TY    ++  + GR+EEA+     M   G                 + P  ++
Sbjct: 695 GHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG-----------------VTPDVVT 737

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  IN     G    A    +         N  TY  L+   +K
Sbjct: 738 YNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 250/538 (46%), Gaps = 22/538 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN  L +L +      +  L S + ++GL+P+  TYN ++  YCK G L  A R   L+ 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           ++    D +T N L+ G+C    L +A  L   M  +    +  +Y  LI    E+    
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L+  +   G   N  T+ ++IK  CKEG+I  A  ++  M   G  P   TYN +I
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  CK+G M++A  +  +M + G   +  T N++++ L C  KLDEA  LLN A  RG+ 
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL-CGGKLDEAEELLNGAIARGFT 385

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
              +++  LI GY + E+ + AL++   M           Y  +I  L +  + ++A + 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE+  +G+ P+  T+ +II G+C  G V  AL+    M  +   P+  T   L+ GL +
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +  L KA+         G     +TY TLI   CK+   ++AF L   ME+  L PD   
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 565

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTP------------- 475
           Y  +  AL +SGR EEA  F   +V  G    K+ +  +    SK               
Sbjct: 566 YNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622

Query: 476 -EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            E       +YS  +   C Q +  +AL I ++    G+  N   Y  +++ +IK  K
Sbjct: 623 NEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 269/576 (46%), Gaps = 59/576 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKL--------------------------------NEVRD- 31
           G LPD VTYNT++ A  KKG L                                +++R  
Sbjct: 174 GLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKA 233

Query: 32  --LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLING 89
             LL  M   G   N  +Y IL+ G C+   ++EA+ +V +M  +    ++ TY +LI G
Sbjct: 234 CWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKG 293

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C  G + +A  L  EM    ++P V TYN +I+ + +SGR  +A  +   ++++G  P+
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+N +I   C  GK+D+A +++      GF+P  +T+  LI+  CKA  +++A R+  
Sbjct: 354 DWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKS 412

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M     K++      +++ L  + +L EA   LN     G   + V+Y ++I GY +  
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVG 472

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
               AL+++  M+     P+ +TY ++I+GL Q  K  +A+ ++ ++ + G+ P   T+ 
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYT 532

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T+I G C + + + A +    M +    PD    N+L   LC+ G  E+A  F    + K
Sbjct: 533 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRK 589

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G  +  VTY +L+    K    + A  L+ +M  +    D YTY+ +  AL +  +L EA
Sbjct: 590 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEA 649

Query: 450 QK-------------------FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
                                  S M++ GK +H     N   +     PS+ +Y+  I+
Sbjct: 650 LSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH-KPSATTYTVFIS 708

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            +C  GR ++A  +  E  + G+  +  TY   +NG
Sbjct: 709 SYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFING 744



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 161/615 (26%), Positives = 260/615 (42%), Gaps = 107/615 (17%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC PD+ TYN+++  L   GKL+E  +LL+    +G  P   T+  L++GYCK   
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 61  LKEAMRV----------VDL-------------------------MTQNKSLPDVWTYNM 85
           + +A+RV          +DL                         M  N   P+V TY  
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTS 463

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           +I+G+C  GM+  A  + K ME     P+  TY +LI    +  +  +A  LI ++ E G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I P  +T+  +I+  CK+ + D A ++   ME+NG +PD   YN L DA CK+G  EEA+
Sbjct: 524 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAY 583

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
             +    RKG+ +  +T  +++         D A +L+      G   D  +Y  L+   
Sbjct: 584 SFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            + +K N AL + D+M    +  +   Y  +I  + + GK + A  + NE++ SG  P  
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSA 700

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK---- 381
           TT+   I  +C  G++E+A     +M      PD+VT NI ++G    G +++A      
Sbjct: 701 TTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKR 760

Query: 382 -------------------FFRSWILKGKAVDS--------------------------- 395
                              F +  ++    VD+                           
Sbjct: 761 MVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPT 820

Query: 396 -VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTY+++I+  CK  RLE+A  LL  M  K + P+   Y  +     +     +A  F +
Sbjct: 821 VVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 880

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M+E G                   P   SY   I   C +G Y  A  +F +       
Sbjct: 881 DMIEFG-----------------FQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYN 923

Query: 515 INKSTYMNLMNGLIK 529
            N+  +  L +GL+K
Sbjct: 924 HNEVAWKILNDGLLK 938



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 205/416 (49%), Gaps = 19/416 (4%)

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           KL   L + G+ P+ VT+N MI  YCK+G +  A +    + E+G   D  T N L+   
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C+  ++ +A  ++ +M   G + N  +   ++  LC  + + EA +L+      G  L+ 
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
            +Y  LI G  ++ + + A  L DEM  R ++PS +TYNAMI G  +SG+ + A+ +   
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + Q+G  PD+ T+N++I+G C  G++++A +  N  + + F P ++T   L++G C+   
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           ++ AL+   + I     +D   Y  LI+ L K+ RL++A   L+EM    L P+  TY +
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTS 463

Query: 436 IHTALVESGRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEE 477
           I     + G +  A +   +M   G                  K  H+ +   T    + 
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           I P  I+Y+  I   C +  + +A ++FE   Q G+  ++  Y  L + L K  ++
Sbjct: 524 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRA 579



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 217/491 (44%), Gaps = 48/491 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  TY +++  L +  KL++   L++ M++ G+ P   TY  L+ G CK   
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 543

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA--FRLRKEMESLKLL------ 112
              A R+ ++M QN   PD   YN+L +  C +G  EEA  F +RK +   K+       
Sbjct: 544 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVD 603

Query: 113 ------------------------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                                    D+ TY+ L+    +  +  EA  ++D++   G+K 
Sbjct: 604 GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKC 663

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N V + I+I    KEGK D A  +   M  +G  P   TY   I + CK G +EEA  ++
Sbjct: 664 NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLI 723

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG-------YYL--DEVSYG 259
             M R G+  + +T N  ++       +D A+  L              Y+L        
Sbjct: 724 GEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKM 783

Query: 260 TLITGYFRDEKA-------NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           +LI  ++ D          N   +L + M +  + P+  TY+++I G  ++ + E+A  +
Sbjct: 784 SLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVL 843

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L+ +L   + P+E  +  +I   C      KA+ F   M+E  F+P + + + L+ GLC 
Sbjct: 844 LDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCD 903

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           EG  ++A   F   +      + V +  L   L K   ++    LL+ M+ +    D  +
Sbjct: 904 EGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSES 963

Query: 433 YAAIHTALVES 443
           Y+ +  ++ E+
Sbjct: 964 YSMLTDSIREA 974


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 254/537 (47%), Gaps = 33/537 (6%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           + V  + +   L   GK  +   ++ +M  +G +P+ +TY+ ++   C    +  A  + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M  N  +PDV+TY +LI+ +C  G+L++A +   EM      P+VVTY  LI+ + ++
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC--- 185
            +   A +L + +   G  PN VT+  +I  +CK G+I+KAC+I   M  N   PD    
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 186 -------------VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
                         TY  L+D  CKA  ++EA  ++DVM  +G + N I  + ++   C 
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             KLDEA M+    S+RGY  +  +Y +LI   F+D++ + ALK+   M E    P+   
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  MI GL + GKT++A  +++ + + G  P+  T+  +I GF   G+V+K L+   +M 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K   P+ VT  +L++  C  G+L+ A +                Y  +I      R   
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFI 861

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            + GLL E+ E    P    Y  +  +  ++GRLE A +            H+ +   TS
Sbjct: 862 ISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALEL-----------HKEMSSCTS 910

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +  + D     YS  I       +   A +++ +  ++G     S +  L+ GLI+
Sbjct: 911 YSAADKD----LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 247/576 (42%), Gaps = 74/576 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y  ++  L +     E  D LS M+    +PN  TY IL+ G  +   L    R++
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR---- 124
            +M      P    +N LI+ +C +G    A++L K+M      P  V YN LI      
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 125 -------------------------------------FFESGRSMEAFKLIDELDEHGIK 147
                                                   +G+  +A+ +I E+   G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+  T++ +I   C   K+D A  +   M+ N   PD  TY  LID+ CK G +++A + 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D M R G   N +T   ++H     +K+  A  L       G   + V+Y  LI G+ +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 268 DEKANRALKLWDEMKERQIMPST----------------FTYNAMIWGLSQSGKTEQAID 311
             +  +A +++  M+    +P                  FTY A++ GL ++ K ++A D
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+ +   G  P+   ++ +I GFC  G++++A     KM E+ + P++ T + L+  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++  L+ ALK     +    A + + Y  +I  LCK  + ++A+ L+S MEEK   P+  
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY A+     ++G++++  +    M   G                   P+ ++Y   IN 
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKG-----------------CAPNFVTYRVLINH 820

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            C+ G   DA Q+ +E +Q     + + Y  ++ G 
Sbjct: 821 CCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 251/589 (42%), Gaps = 77/589 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++  G  P  +TYN ++    +  +L+    +  +M   G   +  T    V   CK G 
Sbjct: 223 LKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ +++   + +   D   Y  +I+G C A + EEA      M S   +P+VVTY  
Sbjct: 283 WREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRI 339

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+       +     +++  +   G  P+    N +I  YC+ G    A K+++ M + G
Sbjct: 340 LLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 181 FSPDCVTYNTLI--------------------------DAN---------------CKAG 199
             P  V YN LI                          DA+               C AG
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
             E+A+ ++  M  KG   +T T + ++  LC   K+D A++L           D  +Y 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI  + +     +A K +DEM      P+  TY A+I    ++ K   A ++   +L  
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--------VEKSFK--------PDIVTC 363
           G IP+  T+  +I G C  GQ+EKA Q + +M        V+  FK        P+I T 
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GLC+   +++A        ++G   + + Y+ LI   CK  +L++A  + ++M E
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +  GP+ YTY+++   L +  RL+ A K  S M+E                     P+ I
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-----------------SCAPNVI 742

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            Y+E I+  C  G+  +A ++     +KG   N  TY  +++G  K  K
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 20/396 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP----------------NRTTY 48
           GC+P+ VTY  ++D   K G++ +   + + M+    +P                N  TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             LV G CK   +KEA  ++D+M+     P+   Y+ LI+G+C  G L+EA  +  +M  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
               P+V TY++LI+R F+  R   A K++  + E+   PN + +  MI   CK GK D+
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +++  MEE G  P+ VTY  +ID   KAG +++   +M  MG KG   N +T   +++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C    LD+A+ LL+   +  +      Y  +I G+ R+     +L L DE+ E   +P
Sbjct: 820 HCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVP 877

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNEL--LQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
               Y  +I    ++G+ E A+++  E+    S    D+  ++++I       +V+KA +
Sbjct: 878 IIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFE 937

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            +  M+++   P++     L+ GL R    E+AL+ 
Sbjct: 938 LYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 230/528 (43%), Gaps = 51/528 (9%)

Query: 49  NILVSGYCKLG-W---LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK 104
           N+L+   C+ G W   L+E  R+ DL  +    P   TYN L+  +  A  L+ A+ + +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYK----PSRLTYNALVRVFLEADRLDTAYLVHR 256

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           EM       D  T    ++   ++GR  EA  LI++ +    K + V +  MI   C+  
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEAS 313

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
             ++A   +  M  +   P+ VTY  L+    +   +    R++ +M  +G   +    N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR------ALKLW 278
           +++H  C       AY LL      G     V Y  LI G   +EK         A K +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            EM +  ++ +    + +   L  +GK E+A  ++ E++  G IPD +T++ +I   C+ 
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
            +V+ A     +M      PD+ T  IL+   C+ G+L++A K+F   +  G A + VTY
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM-- 456
             LI +  K R++  A  L   M  +   P+  TY A+     +SG++E+A +  + M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 457 ------------VETGKIN-----------------HQVVQPN---TSKTPEEIDPSSIS 484
                       ++ G I                  H+V +        + E  +P+ I 
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y   I+  C  G+  +A  +F +  ++G   N  TY +L++ L K ++
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 35/310 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+++ Y+ ++D   K GKL+E + + + M ++G  PN  TY+ L+    K   L  A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V+  M +N   P+V  Y  +I+G C  G  +EA+RL   ME     P+VVTY  +I+ 
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN----- 179
           F ++G+  +  +L+ ++   G  PN VT+ ++I   C  G +D A +++  M++      
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 180 ---------GFS-------------------PDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                    GF+                   P    Y  LID+ CKAG +E A  +   M
Sbjct: 846 MAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 212 GR--KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                    +    ++++ +L    K+D+A+ L     KRG   +   +  L+ G  R  
Sbjct: 906 SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965

Query: 270 KANRALKLWD 279
           +   AL+L D
Sbjct: 966 RWEEALQLSD 975



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 4/213 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTY  ++D   K GK+++  +L+  M  +G  PN  TY +L++  C  G 
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A +++D M Q      +  Y  +I G+    ++  +  L  E+     +P +  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRI 884

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVT--HNIMIKWYCKEGKIDKACKIVRNMEE 178
           LI+ F ++GR   A +L  E+        A    ++ +I+      K+DKA ++  +M +
Sbjct: 885 LIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIK 944

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            G  P+   +  L+    +    EEA ++ D +
Sbjct: 945 RGGIPELSIFFYLVKGLIRINRWEEALQLSDCI 977


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 262/566 (46%), Gaps = 37/566 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLG 59
           M   G  PD  TYN ++  L + G L     L   M ++ G   +R +Y IL+ G C  G
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAG 175

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            + +A RV   M++    P V TY +L++G C    + EA  L  EM +  ++P+VVTYN
Sbjct: 176 RIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYN 235

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI    + GR  +  KL+++++     P+  T+  ++   CK GK+    K++      
Sbjct: 236 ALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK 295

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G + + +TYN LI+  CK G+M+ A  ++ +M R  +     T N ++H  CC  K+ +A
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
              L   +  G   + V++ +LI+G     +   AL+L D M+E  ++P   TY   I  
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDA 415

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L   G+ E+A  + + L   G+      + +++HG+C  G ++ A     KM  ++  PD
Sbjct: 416 LCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPD 475

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + T N L+ GLC+   L++A+        +G    + T+N LI  +  +++  DA  +  
Sbjct: 476 VHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYE 535

Query: 420 EMEEKKLGPDRYTYAA---------------IHTALV---ESGRLEEAQKFTSIM---VE 458
           +M      PD+ TY                 I  A+V   E+G   + + + +I+   V+
Sbjct: 536 QMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVD 595

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG--------------RYKDALQI 504
            G +  +    +       IDP   +YS  +N  C++                 ++  ++
Sbjct: 596 AG-LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQEL 654

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
           FE+  +   A   STY  L+ GL  +
Sbjct: 655 FEQMCESDAAPGISTYKALLRGLCNQ 680



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 247/519 (47%), Gaps = 23/519 (4%)

Query: 8   PDNV-TYNTILDALFKKG----KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           P +V ++N  L A   +G    +L  +      M K G  PNR TYN L++ +CKL  L 
Sbjct: 48  PSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTL 121
           +A   +  M +    PD +TYN L+ G C AG+L  A  L  +M        D  +Y  L
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I     +GR  +A ++  ++     +P   T+ +++   CK  ++ +A  ++  M   G 
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTYN LI   C+ G  ++  ++++ M  +    +  T   ++H LC   K+     
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAK 287

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L+ A  +G  L+ ++Y  LI GY +      AL +   MK  ++ P   T+N +I G  
Sbjct: 288 VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFC 347

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             GK  +A+  L ++  +G+ P+  TFN++I G CS G+ + AL+  + M E    PD  
Sbjct: 348 CGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQ 407

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T  I +  LC EG LE+A   F    +KG    +V Y +L+   C+   ++ AFGL+ +M
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM 467

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             +   PD +TY  +   L +  RL+ A      M + G                 I+P+
Sbjct: 468 ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG-----------------IEPT 510

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           + +++  I +     ++ DA +++E+    G   +K TY
Sbjct: 511 TCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTY 549



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 222/499 (44%), Gaps = 57/499 (11%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P   TY  +LD L K  ++ E   LL +M  +G+VPN  TYN L+ G C+ G   +  
Sbjct: 192 CRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVT 251

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++++ M   +  PD WTY  +++G C  G +    ++  E     +  +V+TYN LIN +
Sbjct: 252 KLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGY 311

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G    A  ++  +  + + P   T N +I  +C  GK+ KA   +  M   G SP+ 
Sbjct: 312 CKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNT 371

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VT+N+LI   C  G  + A R++D+M   G+  +  T    +  LC E +L+EA+ L + 
Sbjct: 372 VTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSC 431

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +G     V Y +L+ GY +    + A  L ++M     MP   TYN +I GL +  +
Sbjct: 432 LPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKR 491

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD------ 359
            ++AID+L+++ + G+ P   TFN +I     + +   A + + +M+    KPD      
Sbjct: 492 LDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTL 551

Query: 360 -------------------------------IVTCNILLSGLCREGILEKALKFFRSWIL 388
                                          + T N ++      G+ EKA  FF    +
Sbjct: 552 KISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKA--FFAHVKM 609

Query: 389 KGKAVD--SVTYNTLISSLCKERRLEDAFG---------------LLSEMEEKKLGPDRY 431
               +D    TY+ L++ +C +    DAF                L  +M E    P   
Sbjct: 610 LSVPIDPDCTTYSILLNYMCNKDD-SDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGIS 668

Query: 432 TYAAIHTALVESGRLEEAQ 450
           TY A+   L    RLEE +
Sbjct: 669 TYKALLRGLCNQCRLEEVE 687



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 216/468 (46%), Gaps = 27/468 (5%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL------PDVVTYNTLINRFFESGRSM 132
           DV ++N  +  + + G    A RL   + S   +      P+  TYNTLIN   +     
Sbjct: 50  DVRSHNAALIAYSSRG--SRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTL 191
           +A   +  + E G+ P+  T+N ++   C+ G +  AC +   M    G   D  +Y  L
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C AG +++A R+   M R   +    T   +L  LC  +++ EA  LL     +G 
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + V+Y  LI G  ++ + +   KL ++M+ ++  P  +TY  ++ GL + GK      
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAK 287

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+E +  G+  +  T+N +I+G+C  G ++ AL     M      P + T N ++ G C
Sbjct: 288 VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFC 347

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G + KA+ F       G + ++VT+N+LIS  C     + A  LL  MEE  + PDR 
Sbjct: 348 CGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQ 407

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TYA    AL + G+LEEA    S +   G   H V+                 Y+  ++ 
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVI-----------------YTSLVHG 450

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +C  G    A  + E+   +    +  TY  L++GL K ++ + +A+D
Sbjct: 451 YCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKR-LDRAID 497



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 204/447 (45%), Gaps = 41/447 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +G LPD  TY   +DAL  +G+L E   L S +  +G+  +   Y  LV GYC++G 
Sbjct: 397 MEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGD 456

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  +++ M     +PDV TYN LI+G C    L+ A  L  +M+   + P   T+N 
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNI 516

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK--WY---CKEGKIDKACKIVRN 175
           LI +     +  +A K+ +++   G KP+  T+ + I   W+    KE  ID A   V  
Sbjct: 517 LIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVE 573

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M E G  PD  TYN +I A   AG  E+AF     M    +  +  T + +L+ +C +  
Sbjct: 574 MHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDD 633

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL------KLWDEMKERQIMPS 289
            D                            F +EK  + +      +L+++M E    P 
Sbjct: 634 SDA---------------------------FDNEKIWKMVDVRNLQELFEQMCESDAAPG 666

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TY A++ GL    + E+   +L ++  + ++ DE   + ++  +C+     +A +   
Sbjct: 667 ISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFR 726

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M  +SF+P + +C +LLSGLC  G    A+  F   +  G   D V +  LI  L ++ 
Sbjct: 727 SMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKG 786

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAI 436
                  +LS M+ KK      TYA++
Sbjct: 787 HAGACLEMLSVMDAKKCVASTRTYASL 813


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 234/458 (51%), Gaps = 8/458 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G   D  + N +L  L +   +  + +LL++M+K+ + P+  T+ ILV+  CK   + E
Sbjct: 275 LGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDE 334

Query: 64  AMRVVDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-LPDVV 116
           A++V D +            PDV  +N LI+G C  G  E+   L +EM+   +  P+ V
Sbjct: 335 ALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTV 394

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TYN LI+ FF++G    A +L  +++E G++PN +T N ++   CK G++ +A +    M
Sbjct: 395 TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM 454

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +  G   +  TY  LI A C   N+  A +  + M   G   + +   +++  LC   ++
Sbjct: 455 KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRM 514

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           ++A ++++     G+ LD   Y  LI+G+ + +K  R  +L  EM+E  + P T TYN +
Sbjct: 515 NDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTL 574

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS- 355
           I  L ++G    A  ++ ++++ G+ P   T+  IIH +CS+  V++ ++   +M   S 
Sbjct: 575 ISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSK 634

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P+ V  NIL+  LCR   +++A+       +K    ++ TYN ++  +  ++ L  AF
Sbjct: 635 VPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAF 694

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            L+  M E+   PD  T   +   L   G +E+ + F 
Sbjct: 695 ELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFV 732



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 220/462 (47%), Gaps = 8/462 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD      ++  L    K     ++L  + + G   +  + N L++   +   +K  
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF----RLRKEMES--LKLLPDVVTY 118
             ++  M + K  P V T+ +L+N  C A  ++EA     RLR +  S  + + PDVV +
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           NTLI+   + G+  +   L++E+    I +PN VT+N +I  + K G  D+A ++ R M 
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E G  P+ +T NTL+D  CK G +  A    + M  KGLK N  T   ++   C    ++
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A          G   D V Y +LI+G     + N A  +  ++K          YN +I
Sbjct: 481 RAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLI 540

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  +  K E+  ++L E+ ++G+ PD  T+NT+I      G    A +   KM+++  +
Sbjct: 541 SGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLR 600

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDAFG 416
           P +VT   ++   C +  +++ +K F       K   ++V YN LI +LC+   ++ A  
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           L+ +M+ K++ P+  TY AI   + +   L +A +    MVE
Sbjct: 661 LMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 187/384 (48%), Gaps = 2/384 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL-VPNRTTYNILVSGYCKLGWLKE 63
           G  PD V +NT++D L K GK  +   LL +MK   +  PN  TYN L+ G+ K G    
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +    P+V T N L++G C  G +  A     EM+   L  +  TY  LI+
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALIS 471

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F        A +  +E+   G  P+AV +  +I   C  G+++ A  +V  ++  GFS 
Sbjct: 472 AFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D   YN LI   CK   +E  + ++  M   G+K +TIT NT++  L        A  ++
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQ 302
               K G     V+YG +I  Y   +  +  +K++ EM    ++ P+T  YN +I  L +
Sbjct: 592 EKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCR 651

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +   ++AI ++ ++    + P+ TT+N I+ G   +  + KA +  ++MVE++ +PD +T
Sbjct: 652 NNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYIT 711

Query: 363 CNILLSGLCREGILEKALKFFRSW 386
             +L   L   G +EK   F   +
Sbjct: 712 MEVLTEWLSAVGEIEKLKHFVEGY 735



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 231/539 (42%), Gaps = 75/539 (13%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR------VVD 69
           +L  L K G+  +   +L +M +             V+G    G L  + R      VV 
Sbjct: 180 LLRVLLKSGRAGDALHVLDEMPQ-------ANSGFSVTGEIVFGELVRSGRSFPDGEVVG 232

Query: 70  LMT---QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           L+    +    PD +    L+   C       A+ +   +  L    D  + N L+  + 
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLT-WL 291

Query: 127 ESGRSMEAF-KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS--- 182
             GR ++   +L+ E+++  I+P+ VT  I++   CK  +ID+A ++   +   G S   
Sbjct: 292 GRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWV 351

Query: 183 ---PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              PD V +NTLID  CK G  E+   +++ M     KM  I                  
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM-----KMGNINRP--------------- 391

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                         + V+Y  LI G+F+    +RA +L+ +M E  + P+  T N ++ G
Sbjct: 392 --------------NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDG 437

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+  +A++  NE+   G+  +  T+  +I  FC    + +A+Q   +M+     PD
Sbjct: 438 LCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPD 497

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            V    L+SGLC  G +  A        L G ++D   YN LIS  CK+++LE  + LL+
Sbjct: 498 AVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLT 557

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EMEE  + PD  TY  + + L ++G    A K    M++ G                 + 
Sbjct: 558 EMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG-----------------LR 600

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           PS ++Y   I+ +CS+    + ++IF E          +   N++   + R   + +A+
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAI 659



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 201/445 (45%), Gaps = 37/445 (8%)

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSM-EAFKLIDELDEHGIKPNAVTHNIMIKW 159
           R RK       LP      +L+ +  E+ R + ++  L ++LD     P  + H ++ + 
Sbjct: 128 RFRKSTHPT--LPLTPKSASLLLQCLENARLVNDSLLLFNQLDPSSKSPQ-LCHGLL-RV 183

Query: 160 YCKEGKIDKACKIVRNMEE--NGFSPDCVTYNTLIDANCKAGNM---EEAFRMMDVMGRK 214
             K G+   A  ++  M +  +GFS   VT   +     ++G      E   ++  +G +
Sbjct: 184 LLKSGRAGDALHVLDEMPQANSGFS---VTGEIVFGELVRSGRSFPDGEVVGLVAKLGER 240

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+  +   L  ++  LC ++K   A+ +L+   + G  +D  S   L+T   R     R 
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS------GMIPDETTF 328
            +L  EM++R+I PS  T+  ++  L ++ + ++A+ + + L         G+ PD   F
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSF-KPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           NT+I G C  G+ E  L    +M   +  +P+ VT N L+ G  + G  ++A + FR   
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            +G   + +T NTL+  LCK  R+  A    +EM+ K L  +  TY A+ +A      + 
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            A +    M+ +G                   P ++ Y   I+  C  GR  DA  +  +
Sbjct: 481 RAMQCFEEMLSSG-----------------CSPDAVVYYSLISGLCIAGRMNDASVVVSK 523

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
            +  G ++++S Y  L++G  K++K
Sbjct: 524 LKLAGFSLDRSCYNVLISGFCKKKK 548


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 209/370 (56%), Gaps = 37/370 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLGWLKEAMR 66
           P+ VTYNT++     +G++    +++ +M+++G + P++ TY  L+SG+CK+G +++A++
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           V D ++T+ +  P    YN LI G+C+ G L+ A + R++M    +   V TYN L++  
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG----- 180
           F   R+ +A+ +++E+ ++G  P+  T+NI+I  YCKEG   KA ++   M + G     
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324

Query: 181 ---------FS---------------------PDCVTYNTLIDANCKAGNMEEAFRMMDV 210
                    FS                     PD V YN LI+++C  G+ME A+ +M  
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE 384

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M +K +  + +T NT++   C   +LDEA  L++  +KRG   D VSY TLI+GY     
Sbjct: 385 MEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              AL++ DEM ++   P+  TYNA+I GL +  + + A +++ E++  G+ PD++T+ +
Sbjct: 445 IKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYIS 504

Query: 331 IIHGFCSEGQ 340
           +I G  +E +
Sbjct: 505 LIEGLTTEDE 514



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 218/399 (54%), Gaps = 6/399 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+N +L  L   GK     +LL  M +    PN  TYN +++G+C  G ++ A+ V+  M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESG 129
            +   + PD +TY  LI+GWC  G +E+A ++  EM +  ++ P  V YN LI  + + G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +   A +  +++ + GI     T+N+++     + +   A  ++  M++NGFSPD  TYN
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI+  CK GN ++A  + + M +KG++   +T  ++++    + ++ E   L N A K+
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V Y  LI  +       RA ++  EM++++I P   TYN ++ G    G+ ++A
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +++E+ + G+ PD  ++NT+I G+  +G ++ AL+  ++M++K F P ++T N L+ G
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           LC+    + A    +  + KG   D  TY +LI  L  E
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 218/407 (53%), Gaps = 6/407 (1%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           L +D+ +  L    TT+NI++   C  G   + +R ++L+ Q    P+  TYN +I G+C
Sbjct: 103 LFADIYRLRLPLCTTTFNIMLRHLCATG---KPVRALELLRQMPR-PNAVTYNTVIAGFC 158

Query: 92  NAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG-IKPN 149
             G ++ A  + +EM E   + PD  TY TLI+ + + GR  +A K+ DE+   G + P+
Sbjct: 159 ARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPS 218

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           AV +N +I  YC  GK+D A +   +M + G +    TYN L+ A        +A+ +++
Sbjct: 219 AVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLE 278

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M + G   +  T N +++  C E    +A  +    S++G     V+Y +LI  + R  
Sbjct: 279 EMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKG 338

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +     +L++   ++ I P    YNA+I      G  E+A +++ E+ +  + PD+ T+N
Sbjct: 339 QVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYN 398

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ GFC  G++++A    ++M ++  +PD+V+ N L+SG   +G ++ AL+     + K
Sbjct: 399 TLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDK 458

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           G     +TYN LI  LCK R+ +DA  L+ EM  K + PD  TY ++
Sbjct: 459 GFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISL 505



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 197/381 (51%), Gaps = 6/381 (1%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N+++   C  G    A  L ++M      P+ VTYNT+I  F   GR   A +++ E+
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 142 DEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDANCKAG 199
            E G I P+  T+  +I  +CK G+++ A K+   M   G  +P  V YN LI   C  G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            ++ A +  + M ++G+ M   T N ++H L  + +  +AY +L    K G+  D  +Y 
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI GY ++    +AL++++EM ++ +  +  TY ++I+  S+ G+ ++   + N  ++ 
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+ PD   +N +I+  C+ G +E+A +   +M +K   PD +T N L+ G C  G L++A
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
                    +G   D V+YNTLIS    +  ++DA  +  EM +K   P   TY A+   
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473

Query: 440 LVESGRLEEAQKFTSIMVETG 460
           L +  + ++A+     MV  G
Sbjct: 474 LCKIRQGDDAENLMKEMVAKG 494



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 227/470 (48%), Gaps = 32/470 (6%)

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V+  ++ + SLP     ++L+     A     + RL  +++SL +   V + + L++ 
Sbjct: 40  LSVLPHLSASPSLP-----HLLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLS- 93

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              S  S  AF L  ++    +     T NIM++  C  GK  +A +++R M      P+
Sbjct: 94  ---SLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PN 146

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            VTYNT+I   C  G ++ A  +M  M  R G+  +  T  T++   C   ++++A  + 
Sbjct: 147 AVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVF 206

Query: 244 NSASKRG-YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           +    +G      V Y  LI GY    K + AL+  ++M +R I  +  TYN ++  L  
Sbjct: 207 DEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFM 266

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
             +   A  +L E+ ++G  PD  T+N +I+G+C EG  +KAL+   +M +K  +   VT
Sbjct: 267 DARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVT 326

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+    R+G +++  + F   + KG   D V YN LI+S C    +E A+ +++EME
Sbjct: 327 YTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEME 386

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +K++ PD  TY  +       GRL+EA+     M + G                 I P  
Sbjct: 387 KKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG-----------------IQPDL 429

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +SY+  I+ +  +G  KDAL++ +E   KG      TY  L+ GL K R+
Sbjct: 430 VSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQ 479


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 250/468 (53%), Gaps = 20/468 (4%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
            +  ++  Y + G L+ AMRV+ +M +    PD+   N  I+       L++A R  + M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
           + +++ P+V+TYN LI  + +  R  +A +LI E+   G  P+ +++  ++ + CKE +I
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353

Query: 167 DKACKIVRNM-EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
            +   ++  M +++   PD VTYNT +    K G+ +EA   +     +  +++ +  + 
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           I+H+ C E ++D+A  ++N    +G   D V+Y ++I G  ++ K ++A K+  +M +  
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P+T +Y A++ GL ++G + +A +M+N   +   IP+  T++ ++HGF  EG+  +A 
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 533

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
               +M++K F P  V  N+L+  LC+E  +++A +F    +  G AV+ V + T+I   
Sbjct: 534 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 593

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C++  LE A  LL +M      PD  TY  I  AL + GR+EEA K    M+  G I   
Sbjct: 594 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLI--- 650

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE--TRQK 511
                         P+ ++Y   I+++C  GR +D L++ E+  +RQ+
Sbjct: 651 --------------PTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQE 684



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 241/479 (50%), Gaps = 8/479 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD    NT +  L    +L++    L  M+   + PN  TYN L+ GYC L  
Sbjct: 258 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHR 317

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA-FRLRKEMESLKLLPDVVTYN 119
           L++AM ++  M      PD  +Y  ++   C    ++E    + K ++   LLPD VTYN
Sbjct: 318 LEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYN 377

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T ++   + G   EA + + E +E   + + V ++ ++  +C+EG++DKA +IV  M   
Sbjct: 378 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 437

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY ++I+  C+   +++A +M+  M + G K NT++   +L+ LC      EA
Sbjct: 438 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 497

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++Y  L+ G+ R+ K++ A  L  EM ++   P+    N +I  
Sbjct: 498 REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 557

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L Q  K ++A   + + L +G   +   F T+IHGFC +  +E AL   + M   +  PD
Sbjct: 558 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 617

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT   ++  L ++G +E+A K     +  G     VTY T+I   C+  R+ED   LL 
Sbjct: 618 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLE 677

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KIN----HQVVQPNTSK 473
           +M  ++    R  Y  +   L   G LE+A K    ++ T  KI+    H +++   SK
Sbjct: 678 KMLSRQ--ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSK 734



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 237/462 (51%), Gaps = 3/462 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           GC PD ++Y T++  L K+ ++ EVR L+  M K   L+P++ TYN  V    K G   E
Sbjct: 332 GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 391

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +    + +   D   Y+ +++ +C  G +++A  +  EM S   +PDVVTY ++IN
Sbjct: 392 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVIN 451

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +  +  +A K++ ++ +HG KPN V++  ++   CK G   +A +++   EE+ + P
Sbjct: 452 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIP 511

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TY+ L+    + G   EA  ++  M +KG     + +N ++ +LC E+K+DEA   +
Sbjct: 512 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 571

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G  ++ V++ T+I G+ + +    AL L D+M      P   TY  +I  L + 
Sbjct: 572 EQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKK 631

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E+A  +  ++L+ G+IP   T+ T+IH +C  G+VE  L+   KM+ +  +      
Sbjct: 632 GRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAY 689

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  LC  G LE+A K     +     +D+ T + LI S   +     ++ +   M  
Sbjct: 690 NQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFN 749

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           + L PD      +   L+  G+ EEA K     VE G+I+ Q
Sbjct: 750 RNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 791



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 157/344 (45%), Gaps = 54/344 (15%)

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           +AG +  A R++ +M + G++ +    NT +H L    +LD                   
Sbjct: 244 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLD------------------- 284

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
                           +A++  + M+  +I P+  TYN +I G     + E A++++ E+
Sbjct: 285 ----------------KAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEM 328

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGLCREGI 375
              G  PD+ ++ T++   C E ++++      KM++ S   PD VT N  +  L + G 
Sbjct: 329 PFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGH 388

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
            ++AL+F R    +   VD V Y+ ++ S C+E R++ A  +++EM  K   PD  TY +
Sbjct: 389 GDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTS 448

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L +  ++++A+K    M + G       +PNT           +SY+  +N  C  
Sbjct: 449 VINGLCQERKVDQAKKMLRQMYKHG------CKPNT-----------VSYTALLNGLCKN 491

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           G   +A ++   + +     N  TY  LM+G  +  KS S+A D
Sbjct: 492 GNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS-SEACD 534



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 20/246 (8%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P  F Y  ++   S++GK   A+ +L  + ++G+ PD +  NT IH      +++KA++F
Sbjct: 232 PEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M     +P+++T N L+ G C    LE A++       KG + D ++Y T++  LCK
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349

Query: 408 ERRLEDAFGLLSEM-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           E+R+++   L+ +M ++  L PD+ TY      L + G  +EA +F   + E  +   +V
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEF---LREAEERRFRV 406

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                           + YS  ++  C +GR   A +I  E   KG   +  TY +++NG
Sbjct: 407 --------------DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVING 452

Query: 527 LIKRRK 532
           L + RK
Sbjct: 453 LCQERK 458



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 20/280 (7%)

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           ++G ++  Y R  K   A+++   M++  I P     N  I  L    + ++A+  L  +
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
               + P+  T+N +I G+C   ++E A++   +M  K   PD ++   ++  LC+E  +
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353

Query: 377 EKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            K ++     +LK   +  D VTYNT +  L K    ++A   L E EE++   D+  Y+
Sbjct: 354 -KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYS 412

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
           AI  +    GR+++A++  + M   G I                 P  ++Y+  IN  C 
Sbjct: 413 AIVHSFCREGRMDKAKEIVNEMFSKGCI-----------------PDVVTYTSVINGLCQ 455

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           + +   A ++  +  + G   N  +Y  L+NGL K   S+
Sbjct: 456 ERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 495


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 209/385 (54%), Gaps = 2/385 (0%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P++ TYN++I   C  G ++ A    +EM      PDV TY+TL+N   +  R  EA  L
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G  PN VT N++I    K G + +A K+V NM   G  P+ VTYNTLI   C 
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A  +++ M       N +T  TI++ L  +++ ++   +L S  +RG   +E  
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 351

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y +LI+G F++ K+  A++LW EM E+   P+   Y A I GL +  K ++A D+L E+L
Sbjct: 352 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G +P+  T+++++ GF  +G  +KA+    +M+ +  + ++V C++LL+GLC  G L 
Sbjct: 412 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAA 435
           +AL  +   + +G   D V Y+++I  LC    ++    L  EM  +E K  PD  TY  
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 531

Query: 436 IHTALVESGRLEEAQKFTSIMVETG 460
           +  AL     L  A    + M++ G
Sbjct: 532 LFNALCRQDNLTRAIDLLNSMLDEG 556



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 230/467 (49%), Gaps = 23/467 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +TYN I+ AL K G+++   D   +M  +   P+  TY+ L++G CK   + EA
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M     LP+  T+N+LI+     G L  A +L   M     +P+ VTYNTLI+ 
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A  L++++      PN VT+  +I    K+ + +    I+ +MEE G   +
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y++LI    K G  E A R+   M  KG K N +     +  LC ++K DEA  +L 
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G+  +  +Y +L+ G+F+   + +A+ +W EM  + +  +    + ++ GL +SG
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--VEKSFKPDIVT 362
           +  +A+ +   +L  G+ PD   ++++I G C  G V+K L+   +M   E   +PD+VT
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT---------------------L 401
            NIL + LCR+  L +A+    S + +G   DS+T N                      L
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 588

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +  L K  R   A  ++ EM  + L P+  T++ +     +  R+ E
Sbjct: 589 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 635



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 202/416 (48%), Gaps = 18/416 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLP+ VT+N ++DAL K G L+    L+ +M  +G VPN  TYN L+ G C  G 
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 294

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +++ M  +K +P+  TY  +ING       E+   +   ME      +   Y++
Sbjct: 295 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 354

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  F+ G+S  A +L  E+ E G KPN V +   I   C++ K D+A  I++ M   G
Sbjct: 355 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+  TY++L+    K G+ ++A  +   M  + ++ N +  + +L+ LC   +L EA 
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAMIW 298
            +       G   D V+Y ++I G       ++ LKL+ EM  +E +  P   TYN +  
Sbjct: 475 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 534

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE-GQVEKALQFHNKMVEKSFK 357
            L +     +AID+LN +L  G  PD  T N  +          +    F +++V +  K
Sbjct: 535 ALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLK 594

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                         RE  L  AL+     +L+    +  T++ +I   CK +R+ +
Sbjct: 595 --------------RERKLS-ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 635



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 58/282 (20%)

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE-KALQFHNK 350
           T+  +I   + S +      +L+ + + G +  ET F  +I   C +  +  +A+ F ++
Sbjct: 67  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIF-ILIFKACGKAHLPGEAVNFFHR 125

Query: 351 MV-EKSFKPDIVTCNILLSGLCREGILEKALKF--------------------------- 382
           M  +   K  + + N +L+ + +EG    A KF                           
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 185

Query: 383 -----------FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
                      FR   LK    D  TY+TL++ LCKERR+++A  LL EM+ +   P+  
Sbjct: 186 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 245

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           T+  +  AL ++G L  A K    M   G +                 P+ ++Y+  I+ 
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCV-----------------PNEVTYNTLIHG 288

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            C +G+   AL + E+        N+ TY  ++NGL+K+R++
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA 330


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 225/444 (50%), Gaps = 3/444 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+ TY T++    K  ++ +  +LL +MK  G+ P   T+  L+   C+L +  +A+++
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M   K  PD + Y ++I   C    L+ A    + M     LPD VTY  L++  F+
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + +  +  ++ +E+   G  P  VT+  ++  YCK G+ID+A  ++R ++  G SP    
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+TLID  CK    +EA  + ++    G   + I   + +  LC   KLDEA  +     
Sbjct: 230 YSTLIDGLCKHDRHDEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D VSY  +I    +D + + A +L D+  ER+ MP       ++ GL +S + E
Sbjct: 288 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVE 347

Query: 308 QAIDMLNELLQSG-MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           +A  +L  +L++G   P   T++ +I G C   +++ A     KM      PD+VT   +
Sbjct: 348 EACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAI 407

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +   C+ G L++A + F+    +G A+D V YN LI   C+  ++++A  ++ EM  + +
Sbjct: 408 IDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 467

Query: 427 GPDRYTYAAIHTALVESGRLEEAQ 450
            P+  + + I   L +  R+EEA+
Sbjct: 468 QPNVVSLSTIVDGLCKESRVEEAR 491



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 246/498 (49%), Gaps = 24/498 (4%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVV--DLMTQNKSLPDVWTYNMLINGWCNAGM 95
           + G   N  T N L+  +   G  +EA RV   +L+T  +  PD +TY  LI G+C A  
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFR--PDDFTYGTLIRGFCKAEQ 67

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + +A  L  EM++  + P +VT+ +LI +  E   + +A ++  ++ +  +KP+A  + +
Sbjct: 68  IPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTV 127

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   CK  K+D A      M ++G  PD VTY  L+ +  KA   E+  ++ + M  KG
Sbjct: 128 VIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
                +T  T+++  C   ++D+A  L+      G       Y TLI G  + ++ + A 
Sbjct: 188 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAR 247

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L+ EM    +      Y + I GL ++GK ++A  +  +++++G  PD  ++N II+  
Sbjct: 248 ELF-EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 305

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG-KAVD 394
           C + +V +A +  ++ +E+   P +  C +L+ GLC+   +E+A       +  G +A  
Sbjct: 306 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPS 365

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTY+ +I  LCK  RL+DA+ +L +M      PD  TY AI  A  + GRL+EA++   
Sbjct: 366 VVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 425

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M E G                      ++Y+  I  +C   +  +A+ + EE   +GI 
Sbjct: 426 RMHERG-----------------CALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQ 468

Query: 515 INKSTYMNLMNGLIKRRK 532
            N  +   +++GL K  +
Sbjct: 469 PNVVSLSTIVDGLCKESR 486



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 122/213 (57%), Gaps = 1/213 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD V+YN I+ +L K  +++E ++L+    ++  +P      +LV G CK   ++EA
Sbjct: 290 GCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 349

Query: 65  MRVVDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             +++ M +     P V TY+ +I+G C A  L++A+ + ++M     +PDVVTY  +I+
Sbjct: 350 CVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIID 409

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + GR  EA +L   + E G   + V +NI+I+ YC+  K+D+A  ++  M   G  P
Sbjct: 410 AFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQP 469

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           + V+ +T++D  CK   +EEA  +M+ M  + L
Sbjct: 470 NVVSLSTIVDGLCKESRVEEARLLMEKMNFESL 502



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + ++ G+  +  +  +L+  +  D     A +++ +       P  FTY  +I G  ++ 
Sbjct: 7   AKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAE 66

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  QA+++L E+  +G+ P   TF ++I   C     +KALQ  ++M++   KPD     
Sbjct: 67  QIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYT 126

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++  LC+   L+ A  +F   +  G   D VTY  L+ SL K  + E    +  EM  K
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 186

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TYA +     ++GR+++A      +  TG+                  PS   
Sbjct: 187 GHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR-----------------SPSGSL 229

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           YS  I+  C   R+ +A ++FE     G   +   Y + ++GL K  K
Sbjct: 230 YSTLIDGLCKHDRHDEARELFEMA--AGDVQDVIVYTSFISGLCKAGK 275



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 1/114 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC+PD VTY  I+DA  K G+L+E R+L   M ++G   +   YNIL+ GYC+   
Sbjct: 392 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAK 451

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
           + EA+ +++ M      P+V + + +++G C    +EEA RL  E  + + LPD
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA-RLLMEKMNFESLPD 504


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 227/433 (52%), Gaps = 1/433 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P + T+N +L  L +    ++   + + +K + +V N  ++ I+++G C+ G+    
Sbjct: 119 GHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSK-VVLNAYSFGIMITGCCEAGYFVRV 177

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++ ++ +    P+V  Y  LI+G C  G +  A  L  +M+ L L+P+  TY+ L+N 
Sbjct: 178 FRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNG 237

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   E F++ + ++  GI PNA  +N +I  YC +G +DKA K+   M E G +  
Sbjct: 238 FFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACG 297

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI   C+     EA +++  + + GL  N +T N +++  C   K+D A  L N
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G     V+Y TLI GY + E    AL L  EM+ER I  S  TY  +I   ++  
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLN 417

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T++A +M + + +SG++PD  T++ +IHG C  G +++A +    + E   +P+ V  N
Sbjct: 418 YTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYN 477

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+EG   +AL+     +  G   +  ++ + +  LC++ + ++A  LL +M   
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINS 537

Query: 425 KLGPDRYTYAAIH 437
            L P    Y  +H
Sbjct: 538 GLKPSVSLYKMVH 550



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 195/360 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E FG  P+ V Y T++D   K G +   ++L   M + GLVPN+ TY++L++G+ K G 
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGL 243

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +E  ++ + M ++  +P+ + YN LI+ +CN GM+++AF++  EM    +   V+TYN 
Sbjct: 244 QREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA KL+ ++++ G+ PN VT+NI+I  +C  GK+D A ++   ++ +G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VTYNTLI    K  N+  A  ++  M  + +  + +T   ++         D+A 
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKAC 423

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +   K G   D  +Y  LI G   +     A K +  + E  + P++  YN MI G 
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGY 483

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G + +A+ +LNE++ SGM+P+  +F + +   C + + ++A     +M+    KP +
Sbjct: 484 CKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSV 543



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 172/331 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P+  TY+ +++  FK+G   E   +  +M + G+VPN   YN L+S YC  G 
Sbjct: 219 MDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGM 278

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A +V   M +      V TYN+LI G C      EA +L  ++  + L P++VTYN 
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F + G+   A +L ++L   G+ P  VT+N +I  Y K   +  A  +V+ MEE  
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +   VTY  LIDA  +    ++A  M  +M + GL  +  T + ++H  C    + EA 
Sbjct: 399 IARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEAS 458

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
               S  +     + V Y T+I GY ++  + RAL+L +EM    ++P+  ++ + +  L
Sbjct: 459 KPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLL 518

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +  K ++A  +L +++ SG+ P  + +  +
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 214/450 (47%), Gaps = 18/450 (4%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y+ ++N + ++   ++A      M      P   T+N L+     S    +A+ + + L 
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
              +  NA +  IMI   C+ G   +  +++  +EE G SP+ V Y TLID  CK G++ 
Sbjct: 152 SK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  +   M R GL  N  T + +++    +    E + +  + ++ G   +  +Y  LI
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
           + Y  D   ++A K++ EM+E+ I     TYN +I GL +  K  +A+ +++++ + G+ 
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T+N +I+GFC  G+++ A++  N++      P +VT N L++G  +   L  AL  
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            +    +  A   VTY  LI +  +    + A  + S ME+  L PD YTY+ +      
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
           +G ++EA K                 P  S     + P+S+ Y+  I+ +C +G    AL
Sbjct: 451 NGNMKEASK-----------------PFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRAL 493

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++  E    G+  N +++ + M  L +  K
Sbjct: 494 RLLNEMVHSGMVPNVASFCSTMGLLCRDEK 523



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 207/448 (46%), Gaps = 36/448 (8%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y+ +V+ Y       +A+  +  M      P   T+N L+     +   ++A+ +   ++
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           S K++ +  ++  +I    E+G  +  F+L+  L+E G+ PN V +  +I   CK G + 
Sbjct: 152 S-KVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210

Query: 168 KA----CKIVR-------------------------------NMEENGFSPDCVTYNTLI 192
            A    CK+ R                               NM  +G  P+   YN LI
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C  G +++AF++   M  KG+    +T N ++  LC  KK  EA  L++  +K G  
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V+Y  LI G+    K + A++L++++K   + P+  TYN +I G S+      A+D+
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + E+ +  +   + T+  +I  F      +KA + H+ M +    PD+ T ++L+ G C 
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G +++A K F+S        +SV YNT+I   CKE     A  LL+EM    + P+  +
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG 460
           + +    L    + +EA+     M+ +G
Sbjct: 511 FCSTMGLLCRDEKWKEAELLLGQMINSG 538



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 20/246 (8%)

Query: 289 STFT--YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           ST+T  Y+A++     S  T+QA+  L+ ++  G  P   TFN ++         +KA  
Sbjct: 86  STYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWW 145

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             N +  K    +  +  I+++G C  G   +  +        G + + V Y TLI   C
Sbjct: 146 IFNVLKSKVVL-NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCC 204

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           K   +  A  L  +M+   L P+++TY+ +     + G   E  +    M  +G      
Sbjct: 205 KNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSG------ 258

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                      I P++ +Y+  I+E+C+ G    A ++F E R+KGIA    TY  L+ G
Sbjct: 259 -----------IVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 527 LIKRRK 532
           L + +K
Sbjct: 308 LCRGKK 313



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 78/148 (52%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY  ++DA  +    ++  ++ S M+K GLVP+  TY++L+ G C  G +KEA +    
Sbjct: 404 VTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKS 463

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +    P+   YN +I+G+C  G    A RL  EM    ++P+V ++ + +       +
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEK 523

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIK 158
             EA  L+ ++   G+KP+   + ++ K
Sbjct: 524 WKEAELLLGQMINSGLKPSVSLYKMVHK 551


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 233/450 (51%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + ++ +L A  +  K +E  + L+ MK+  ++P   T N L+S   KL  +K A  V + 
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +      + T+N++IN  C  G  ++A      ME   + P+VVTYNT+IN +   G+
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A K+   + +  +KP+  T+N  I   CKE +I++A  ++  + E+G  P+ VTYN 
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  C  G++++AF   D M  +G+  +  T N ++H L  EK+++EA  ++    ++G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y   I GY R   A +AL L+DEM E+ I P+  TY ++I    +  +  +A 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           +   + ++ GM+PD   FN +I G C  G +++A Q   +M      PD VT N L+ G 
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CRE  +E+A K       +G   D ++YNTLIS   K   ++DA  +  EM      P  
Sbjct: 508 CRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTL 567

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            TY A+     + G  + A++    M   G
Sbjct: 568 LTYNALIQGYSKIGEADHAEELLREMQSKG 597



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 188/359 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +G  P+ VTYNT+++    +GK      +   MK + L P+  TYN  +S  CK   
Sbjct: 243 MEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERR 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA  V+  + ++  +P+  TYN LI+G CN G L++AF  R EM +  ++  V TYN 
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  F   R  EA  +I E+ E G++P+ VT+NI I  YC+ G   KA  +   M E  
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY +LID   K   M EA        ++G+  + I  N ++   C    +D A+
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL          DEV++ TL+ GY R+ K   A KL DEMKER I P   +YN +I G 
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           S+ G  + A+++ +E+L  G  P   T+N +I G+   G+ + A +   +M  K   PD
Sbjct: 543 SKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 225/448 (50%), Gaps = 17/448 (3%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            +++L++ +C     +EA      M+  +++P   T N+L++   +  +   A+ + +E+
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            +  IK + VT NIMI   C+EGK  KA   + +ME  G  P+ VTYNT+I+  C  G  
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E A ++   M  K LK +  T N+ +  LC E++++EA  +L    + G   + V+Y  L
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G       ++A    DEM  R I+ S FTYN +I  L    + E+A DM+ E+ + G+
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD  T+N  I+G+C  G  +KAL   ++MVEK+ +P + T   L+    +   + +A +
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F+  I +G   D + +N LI   C    ++ AF LL EM+  K+ PD  T+  +     
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
              ++EEA+K    M E G                 I P  ISY+  I+ +  +G  KDA
Sbjct: 509 RERKVEEAKKLLDEMKERG-----------------IKPDHISYNTLISGYSKRGDMKDA 551

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
           L++F+E    G      TY  L+ G  K
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGYSK 579



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 167/330 (50%), Gaps = 35/330 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ VTYN ++D    KG L++      +M  +G+V +  TYN+L+        ++EA
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +    PDV TYN+ ING+C  G  ++A  L  EM    + P V TY +LI+ 
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV 436

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  R  EA +   +  + G+ P+ +  N +I  +C  G ID+A ++++ M+     PD
Sbjct: 437 FGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPD 496

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+NTL+   C+   +EEA +++D M  +G+K                           
Sbjct: 497 EVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKP-------------------------- 530

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                    D +SY TLI+GY +      AL+++DEM      P+  TYNA+I G S+ G
Sbjct: 531 ---------DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIG 581

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + + A ++L E+   G+ PD++T+  +I  
Sbjct: 582 EADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 186/379 (49%), Gaps = 17/379 (4%)

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           ++++  YC+  K D+A + +  M+EN   P   T N+L+    K   ++ A+ + + M +
Sbjct: 151 DLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVK 210

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
             +K + +T N +++ LC E K  +A   +      G   + V+Y T+I GY    K   
Sbjct: 211 MNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEA 270

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A K++  MK++ + P  +TYN+ I  L +  + E+A  +L +LL+SG++P+  T+N +I 
Sbjct: 271 ASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALID 330

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C++G ++KA  + ++M+ +     + T N+L+  L  E  +E+A    +    KG   
Sbjct: 331 GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEP 390

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D VTYN  I+  C+    + A  L  EM EK + P   TY ++     +  R+ EA++  
Sbjct: 391 DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKF 450

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
              ++ G +                 P  I ++  I+ HC  G    A Q+ +E     +
Sbjct: 451 KKSIKEGML-----------------PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKV 493

Query: 514 AINKSTYMNLMNGLIKRRK 532
             ++ T+  LM G  + RK
Sbjct: 494 VPDEVTFNTLMQGYCRERK 512



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 17/313 (5%)

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           T+  + +L   C  +K DEA   LN   +        +  +L++   +  K   A  +++
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM +  I  S  T+N MI  L + GK ++A D +  +   G+ P+  T+NT+I+G+C  G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           + E A +    M +K+ KPD  T N  +S LC+E  +E+A       +  G   ++VTYN
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI   C +  L+ AF    EM  + +    +TY  +  AL    R+EEA+     M E 
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 ++P  ++Y+ +IN +C  G  K AL +F+E  +K I     T
Sbjct: 387 G-----------------VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVET 429

Query: 520 YMNLMNGLIKRRK 532
           Y +L++   KR +
Sbjct: 430 YTSLIDVFGKRNR 442



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 129/258 (50%), Gaps = 18/258 (6%)

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           + R  + +T  ++ ++    Q  K ++A++ LN + ++ +IP   T N+++       ++
Sbjct: 139 RNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKI 198

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           + A   + +MV+ + K  IVT NI+++ LCREG  +KA  F     + G   + VTYNT+
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I+  C   + E A  +   M++K L PD YTY +  + L +  R+EEA      ++E+G 
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +                 P++++Y+  I+  C++G    A    +E   +GI  +  TY 
Sbjct: 319 V-----------------PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYN 361

Query: 522 NLMNGLIKRRKSISKAVD 539
            L++ L    K I +A D
Sbjct: 362 LLIHALF-LEKRIEEAED 378



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 10/147 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+    +PD VT+NT++    ++ K+ E + LL +MK++G+ P+  +YN L+SGY K G 
Sbjct: 488 MDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGD 547

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A+ V D M      P + TYN LI G+   G  + A  L +EM+S  + PD  TY  
Sbjct: 548 MKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLY 607

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIK 147
           +I          EA K  D+L E+  K
Sbjct: 608 VI----------EAMKTNDDLVENDDK 624


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 252/526 (47%), Gaps = 34/526 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +LD   +  +  E  +LL +       P+  T+N+L++GYC     +EA  V+  M
Sbjct: 121 TGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREM 180

Query: 72  TQNKSL-PDVWTYNMLINGWCNAGMLEEAF----RLRKEMESLKLLPDVVTYNTLINRFF 126
            ++  + P + T+N++++G C +G +  A      +R+ M          T++ LIN   
Sbjct: 181 EEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV-----SAATFSILINGLV 235

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++G  ++A  L  E   +G   +  T+  ++ W  K  KI +A  ++  +  NG +P   
Sbjct: 236 KAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIA 295

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN L++  CK G +EEA  ++  +   G   + +T  +++  L  EK+  EAY L    
Sbjct: 296 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 355

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           + RG  LD V Y  LI G  +  K  +A  ++  M     +P   T + MI GLS++G+ 
Sbjct: 356 ASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 415

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A+ +   +   G+ P+E  ++ +IHG C   +++ AL+   +M +    PD +T NIL
Sbjct: 416 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 475

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLC+ G +E A  FF   +  G   D  TYN LIS LCK    + A G+L +M     
Sbjct: 476 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS--- 532

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
              R+ Y+++   L +SG+LE        M  +G  N Q                  + +
Sbjct: 533 --SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQ------------------TRT 572

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I   C   R  +A+ +F   R++G+  +   Y ++++ LIK  K
Sbjct: 573 RLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGK 617



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 248/474 (52%), Gaps = 34/474 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEAMR 66
           PD  T+N ++       +  E   ++ +M++  G+ P+  T+N+++ G CK G +  AM 
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211

Query: 67  VVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             + +   +S+P    T+++LING   AGM+ +A  L +E  +     D+ TY  ++N  
Sbjct: 212 HFEAV--RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++ +  EA  L++++  +G  P   T+N ++   CK G++++A  ++R + +NG +PD 
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY +LID   K     EA+++   M  +GL ++T+    ++  L    K+ +A  +  +
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            +  G   D V+  T+I G  +  +   A++++  M+ R + P+   Y+A+I GL ++ K
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A++ML ++ ++   PD  T+N +I G C  G VE A  F ++M+E   KPD+ T NI
Sbjct: 450 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 509

Query: 366 LLSGLCREGILEKAL---------KFFRSWILKG--------------------KAVDSV 396
           L+SGLC+ G  + A          +F  S ++ G                       +S 
Sbjct: 510 LISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQ 569

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
           T   LI  LCK  R+++A  L + + ++ + P  Y Y +I +AL++SG++ E Q
Sbjct: 570 TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQ 622



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 229/452 (50%), Gaps = 8/452 (1%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            T++ +++ L K G + +   L  +    G   +  TY  +V+   K   ++EA+ +++ 
Sbjct: 225 ATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEK 284

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           +T N   P + TYN L+NG C  G LEEA  L +++      PDVVTY +LI+   +  R
Sbjct: 285 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 344

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           S EA+KL  E+   G+  + V +  +I+   + GKI +A  + + M  +G  PD VT +T
Sbjct: 345 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLST 404

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +ID   KAG +  A R+   M  +GL  N +  + ++H LC  +K+D A  +L    K  
Sbjct: 405 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 464

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D ++Y  LI G  +      A   +DEM E    P  +TYN +I GL ++G T+ A 
Sbjct: 465 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAAC 524

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+++  S  +     +++++ G C  G++E      ++M E+S   +  T   L+  L
Sbjct: 525 GVLDDMSSSRFV-----YSSLVDGLCKSGKLEGGCMLFHEM-ERSGVANSQTRTRLIFHL 578

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   +++A+  F + I K        YN++IS+L K  ++ +   +  EM  +   PDR
Sbjct: 579 CKANRVDEAVSLFNA-IRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDR 636

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            TY A+   ++ + R++ A  +   M   G +
Sbjct: 637 VTYNALLNGMIGANRMDRAHYYYLEMTGRGYV 668



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 182/356 (51%), Gaps = 8/356 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY +++D L K+ +  E   L  +M  +GL  +   Y  L+ G  + G + +A
Sbjct: 324 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQA 383

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V   MT +  +PDV T + +I+G   AG +  A R+ K ME+  L P+ V Y+ LI+ 
Sbjct: 384 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 443

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++ +   A +++ ++ +    P+ +T+NI+I   CK G ++ A      M E G  PD
Sbjct: 444 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 503

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI   CKAGN + A  ++D M       +    ++++  LC   KL+   ML +
Sbjct: 504 VYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCMLFH 558

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   +  +   LI    +  + + A+ L++ ++ ++ MP  + YN++I  L +SG
Sbjct: 559 EMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNSIISALIKSG 616

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           K  +   +  E+ +    PD  T+N +++G     ++++A  ++ +M  + + P +
Sbjct: 617 KVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPV 671



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 215/464 (46%), Gaps = 51/464 (10%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V T N L++ F  + R  EA  L+        +P+  T N++I  YC   + ++A  ++R
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIR 178

Query: 175 NMEEN-GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
            MEE+ G +P   T+N ++   CK+G +  A    + + R+ + ++  T + +++ L   
Sbjct: 179 EMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV-RRSMPVSAATFSILINGLVKA 237

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
             + +A+ L    +  G  +D  +Y  ++    +++K   A+ L +++      P+  TY
Sbjct: 238 GMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATY 297

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE--------------- 338
           NA++ GL + G+ E+AID+L +++ +G  PD  T+ ++I G   E               
Sbjct: 298 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAS 357

Query: 339 --------------------GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
                               G++ +A   +  M      PD+VT + ++ GL + G +  
Sbjct: 358 RGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 417

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A++ F+S   +G A + V Y+ LI  LCK R+++ A  +L++M++    PD  TY  +  
Sbjct: 418 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 477

Query: 439 ALVESGRLEEAQKFTSIMVETG----------KINHQVVQPNTSKTPEEIDPSSIS---Y 485
            L +SG +E A+ F   M+E G           I+      NT      +D  S S   Y
Sbjct: 478 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVY 537

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           S  ++  C  G+ +    +F E  + G+A N  T   L+  L K
Sbjct: 538 SSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCK 580



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 169/391 (43%), Gaps = 58/391 (14%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G + +  T N ++  + +  +  +A  +++N     F PD  T+N LI   C A   EEA
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 205 FRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           F ++  M    G+  +  T N +LH LC                                
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLC-------------------------------- 201

Query: 264 GYFRDEKANRALKLWDEMKE-RQIMP-STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
                 K+ + L   D  +  R+ MP S  T++ +I GL ++G   QA  +  E   +G 
Sbjct: 202 ------KSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGC 255

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
             D  T+  I++      ++++A+    K+      P I T N LL+GLC+ G LE+A+ 
Sbjct: 256 TIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAID 315

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             R  +  G   D VTY +LI  L KE+R  +A+ L  EM  + L  D   Y A+   L+
Sbjct: 316 LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL 375

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           ++G++ +A      M   G +                 P  ++ S  I+     GR   A
Sbjct: 376 QTGKIPQASSVYKTMTSHGCV-----------------PDVVTLSTMIDGLSKAGRIGAA 418

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++IF+    +G+A N+  Y  L++GL K RK
Sbjct: 419 VRIFKSMEARGLAPNEVVYSALIHGLCKARK 449



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD +TYN ++D L K G +   R    +M + G  P+  TYNIL+SG CK G    A 
Sbjct: 465 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAAC 524

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-------------- 111
            V+D M+ ++     + Y+ L++G C +G LE    L  EME   +              
Sbjct: 525 GVLDDMSSSR-----FVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLC 579

Query: 112 -------------------LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                              +P    YN++I+   +SG+  E   +  E+     KP+ VT
Sbjct: 580 KANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVT 638

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           +N ++       ++D+A      M   G+ P     + L D
Sbjct: 639 YNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLAD 679



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 19/247 (7%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S  T NA++   +++ +  +A ++L   L +   PD  T+N +I G+C   + E+A    
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177

Query: 349 NKMVEK-SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            +M E     P + T N++L GLC+ G +  A+  F + + +   V + T++ LI+ L K
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEA-VRRSMPVSAATFSILINGLVK 236

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
              +  A  L  E        D +TY AI   L ++ +++EA      +   G       
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG------- 289

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                       P+  +Y+  +N  C  GR ++A+ +  +    G   +  TY +L++GL
Sbjct: 290 ----------CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 339

Query: 528 IKRRKSI 534
            K ++S 
Sbjct: 340 GKEKRSF 346


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 238/475 (50%), Gaps = 4/475 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  +YN ++  +++ G+  +  ++  +M ++ ++PN  TYN ++ G+ K G L+   R+
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M  +   P+  TYN+L++G C AG + E   L  EM S K++PD  TY+ L +    
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  +  ++G+     T +I++   CK+GK+  A ++++++   G  P  V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+ G +E AF     M  + +K + IT N +++ LC  +++  A  LL    
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G      ++ TLI  Y R  +  +   +  EM+E  + P+  +Y +++    ++GK  
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L+++    ++P+   +N II  +   G  ++A     KM      P IVT N+L+
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC +  + +A +   S        D+V+YNTLIS+ C    ++ A  L   M +  + 
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN----HQVVQPNTSKTPEEI 478
               TY  + + L  +GRL E +     M++   +     H ++    SK   EI
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 487



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 217/454 (47%), Gaps = 35/454 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+++TYNT++D   K G L     L   M   GL PN  TYN+L+SG C+ G + E   
Sbjct: 47  LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 106

Query: 67  VVDLMTQNKSLPDVWTYNML-----------------------------------INGWC 91
           ++D M   K +PD +TY++L                                   +NG C
Sbjct: 107 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 166

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +  A  + + + +  L+P  V YNTLIN + ++G    AF    ++    IKP+ +
Sbjct: 167 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 226

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I   CK  +I  A  ++  M++NG +P   T+NTLIDA  + G +E+ F ++  M
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GLK N ++  +I++  C   K+ EA  +L+    +    +   Y  +I  Y      
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 346

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           ++A  L ++MK   I PS  TYN +I GL    +  +A +++N L    +IPD  ++NT+
Sbjct: 347 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 406

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C  G ++KAL    +M +   K  + T + L+SGL   G L +    ++  +    
Sbjct: 407 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 466

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
              +  +N ++ +  K      A  L  EM +K+
Sbjct: 467 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 222/450 (49%), Gaps = 17/450 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+ ++YN++I G   AG   +A  +  EM    +LP+ +TYNT+I+   + G     F+L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            D++  HG+KPNA+T+N+++   C+ G++ +   ++  M      PD  TY+ L D   +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G+ +    +     + G+ +   T + +L+ LC + K+  A  +L S    G     V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI GY +  +   A   + +MK R I P   TYNA+I GL ++ +   A D+L E+ 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
            +G+ P   TFNT+I  +   GQ+EK     ++M E   KP++V+   +++  C+ G + 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A+        K    ++  YN +I +  +    + AF L+ +M+   + P   TY  + 
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L    ++ EA++  + +      NH+++            P ++SY+  I+  C +G 
Sbjct: 373 KGLCNQSQISEAEEIINSLS-----NHRLI------------PDAVSYNTLISACCYRGN 415

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              AL + +   + GI     TY  L++GL
Sbjct: 416 IDKALDLQQRMHKYGIKSTVRTYHQLISGL 445



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 199/410 (48%), Gaps = 19/410 (4%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           PNA ++N++I    + G+   A ++   M E    P+ +TYNT+ID + K G++E  FR+
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D M   GLK N IT N +L  LC   ++ E   LL+  + +    D  +Y  L  G  R
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           +  +   L L+ +  +  +    +T + ++ GL + GK   A ++L  L+ +G++P    
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +NT+I+G+C  G++E A     +M  +  KPD +T N L++GLC+   +  A        
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G      T+NTLI +  +  +LE  F +LSEM+E  L P+  +Y +I  A  ++G++ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 448 EA-----QKFTSIMVETGKINHQVVQPNTSKTPEE-------------IDPSSISYSEKI 489
           EA       F   ++   ++ + ++       P +             I PS ++Y+  I
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
              C+Q +  +A +I        +  +  +Y  L++     R +I KA+D
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC-YRGNIDKALD 421



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 163/322 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  V YNT+++   + G+L         MK + + P+  TYN L++G CK   +  A
Sbjct: 185 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 244

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M  N   P V T+N LI+ +   G LE+ F +  EM+   L P+VV+Y +++N 
Sbjct: 245 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 304

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G+  EA  ++D++    + PNA  +N +I  Y + G  D+A  +V  M+ NG SP 
Sbjct: 305 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 364

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI   C    + EA  +++ +    L  + ++ NT++   C    +D+A  L  
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 424

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G      +Y  LI+G     + N    L+ +M +  ++PS   +N M+   S+ G
Sbjct: 425 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484

Query: 305 KTEQAIDMLNELLQSGMIPDET 326
              +A D+  E+LQ     D+T
Sbjct: 485 NEIKAEDLRKEMLQKRNNHDDT 506



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 127/233 (54%), Gaps = 5/233 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   T+NT++DA  + G+L +   +LS+M++ GL PN  +Y  +V+ +CK G 
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ ++D M     LP+   YN +I+ +   G  ++AF L ++M+S  + P +VTYN 
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 370

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA ++I+ L  H + P+AV++N +I   C  G IDKA  + + M + G
Sbjct: 371 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
                 TY+ LI     AG + E    M+ + +K ++ N +  N I H +  E
Sbjct: 431 IKSTVRTYHQLISGLGGAGRLNE----MEYLYQKMMQNNVVPSNAI-HNIMVE 478



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V+Y +I++A  K GK+ E   +L DM  + ++PN   YN ++  Y + G 
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 345

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +V+ M  N   P + TYN+LI G CN   + EA  +   + + +L+PD V+YNT
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 405

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A  L   + ++GIK    T++ +I      G++++   + + M +N 
Sbjct: 406 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 465

Query: 181 FSPDCVTYNTLIDANCKAGN 200
             P    +N +++A  K GN
Sbjct: 466 VVPSNAIHNIMVEAYSKYGN 485



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 72/141 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P  VTYN ++  L  + +++E  ++++ +    L+P+  +YN L+S  C  G 
Sbjct: 356 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 415

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M +      V TY+ LI+G   AG L E   L ++M    ++P    +N 
Sbjct: 416 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 475

Query: 121 LINRFFESGRSMEAFKLIDEL 141
           ++  + + G  ++A  L  E+
Sbjct: 476 MVEAYSKYGNEIKAEDLRKEM 496


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 267/529 (50%), Gaps = 18/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++  G  PD+V+Y +++  L K G+L E  +L   M+ +  VP    YN ++ GY     
Sbjct: 272 LKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAER 331

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A ++++ + +   +P V ++N ++        ++EA  L   M+     P++ TYN 
Sbjct: 332 FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNI 390

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+    +GR  EA+K+ DE++  G+ PN ++ NIM+   CK  ++++A +I  +  E G
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTY +LID   K G +++A+R+ + M   G   N I   +++       + ++ +
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     +RG   D     T +   F+  +  +   ++++MK    +P   +Y+ +I GL
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +++G+  +  ++   + Q G   D   +N ++ G C  G+V+KA +   +M  K   P +
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   ++ GL +   L++A   F     KG  ++ + Y++LI    K  R+++A+ +L E
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +K L P+ YT+ ++  ALV++  ++EA      M E                  +  P
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEM-----------------KCSP 733

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++ +YS  IN  C   +Y  A   ++E +++G+  N  TY  +++GL K
Sbjct: 734 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAK 782



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 270/525 (51%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P  V++N+IL  L KK K++E   L   MKK    PN +TYNI++   C  G + EA
Sbjct: 346 GCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEA 404

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D M      P++ + N++++  C A  LEEA R+ +        P+ VTY +LI+ 
Sbjct: 405 YKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDG 464

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +A++L +++ + G   N + +  +I+ +   G+ +   KI + M   G  PD
Sbjct: 465 LGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG +E+   + + M   G   +  + + ++H L    +  E   +  
Sbjct: 525 LTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQ 584

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S++G+ LD  +Y  ++ G  +  K ++A ++ +EMK + + P+  TY +++ GL++  
Sbjct: 585 AMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKID 644

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E    G+  +   ++++I GF   G++++A     +M++K   P++ T N
Sbjct: 645 RLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 704

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+  L +   +++AL  F+S      + ++ TY+ LI+ LC+ ++   AF    EM+++
Sbjct: 705 SLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 764

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+  TY  + + L + G + +A      + E  K N  +             P S S
Sbjct: 765 GLIPNVVTYTTMISGLAKVGNITDAYS----LFERFKTNGGI-------------PDSAS 807

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  I    +  R  +A Q+FEETR +G  +N  T ++L++ L K
Sbjct: 808 FNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNK 852



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 256/528 (48%), Gaps = 19/528 (3%)

Query: 6   CL-PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           CL PD V YN  +D   K G ++       ++K  GL P+  +Y  +V   CK G L EA
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M   + +P  + YN +I G+ +A   ++A++L + +     +P VV++N+++  
Sbjct: 301 EELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  +  EA  L D + +   KPN  T+NI+I   C  G++++A KI   ME  G  P+
Sbjct: 361 LGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++ N ++D  CKA  +EEA R+ +    +G   N++T  +++  L  + K+D+AY L  
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+  + + Y +LI  +F   +     K++ EM  R   P     N  +  + ++G
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAG 539

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+   +  ++   G +PD  +++ +IHG    GQ  +       M ++ F  D    N
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYN 599

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ GLC+ G ++KA +      +K       TY +++  L K  RL++A+ L  E + K
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  +   Y+++     + GR++EA      M++ G      + PN       +D  ++ 
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG------LTPNVYTWNSLMD--ALV 711

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +E+I+E         AL  F+  ++   + N  TY  L+NGL + +K
Sbjct: 712 KTEEIDE---------ALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 237/492 (48%), Gaps = 35/492 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN I+D L   G++NE   +  +M+  GL PN  + NI+V   CK   L+EA R+
Sbjct: 383 PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRI 442

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  ++    P+  TY  LI+G    G +++A+RL ++M       + + Y +LI  FF 
Sbjct: 443 FESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFM 502

Query: 128 SGRSMEAFKL-----------------------------------IDELDEHGIKPNAVT 152
            GR  +  K+                                    +++   G  P+  +
Sbjct: 503 HGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRS 562

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           ++I+I    K G+  +   I + M + GF+ D   YN ++D  CK+G +++A+ +++ M 
Sbjct: 563 YSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMK 622

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            K +     T  +I+  L    +LDEAYML   A  +G  L+ + Y +LI G+ +  + +
Sbjct: 623 VKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRID 682

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  + +EM ++ + P+ +T+N+++  L ++ + ++A+     + +    P+  T++ +I
Sbjct: 683 EAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILI 742

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G C   +  KA  F  +M ++   P++VT   ++SGL + G +  A   F  +   G  
Sbjct: 743 NGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGI 802

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            DS ++N LI  +    R  +A+ +  E   +    +  T  ++  AL ++  LE+A   
Sbjct: 803 PDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIV 862

Query: 453 TSIMVETGKINH 464
            +++ E  K  H
Sbjct: 863 GAVLSEIAKSQH 874



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/599 (25%), Positives = 264/599 (44%), Gaps = 94/599 (15%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G+G LP N     ++  L +  +L +   ++  M+     P  + Y +L+     L   +
Sbjct: 136 GYG-LP-NPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA---LAEAR 190

Query: 63  EAMRVVDLMTQNKSLP---DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +  R ++L+ Q + +     V  +  L+      G +E A  L  E++   L PD+V YN
Sbjct: 191 QPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYN 250

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI------------- 166
             I+ F ++G    A+K   EL  HG++P+ V++  M+   CK G++             
Sbjct: 251 VCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAE 310

Query: 167 ----------------------DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
                                 D A K++  + E G  P  V++N+++    K   ++EA
Sbjct: 311 RDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 370

Query: 205 FRMMDVM---------------------GR-------------KGLKMNTITLNTILHTL 230
             + DVM                     GR              GL  N +++N ++  L
Sbjct: 371 LTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRL 430

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   +L+EA+ +  SAS+RG   + V+Y +LI G  +  K + A +L+++M +     + 
Sbjct: 431 CKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP 490

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             Y ++I      G+ E    +  E+++ G  PD T  NT +      G+VEK       
Sbjct: 491 IIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFED 550

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M    F PD+ + +IL+ GL + G   +    F++   +G A+D+  YN ++  LCK  +
Sbjct: 551 MKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           ++ A+ +L EM+ K + P   TY +I   L +  RL+EA     ++ E  K         
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAY----MLFEEAK--------- 657

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                + I+ + I YS  I+     GR  +A  I EE  +KG+  N  T+ +LM+ L+K
Sbjct: 658 ----SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVK 712



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 213/424 (50%), Gaps = 3/424 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P++VTY +++D L KKGK+++   L   M   G   N   Y  L+  +   G  ++ 
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   M +    PD+   N  ++    AG +E+   + ++M+S   LPDV +Y+ LI+ 
Sbjct: 510 HKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHG 569

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G++ E   +   + + G   +A  +N ++   CK GK+DKA +++  M+     P 
Sbjct: 570 LTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPT 629

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY +++D   K   ++EA+ + +    KG+++N I  ++++       ++DEAY++L 
Sbjct: 630 VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILE 689

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K+G   +  ++ +L+    + E+ + AL  +  MKE +  P+T+TY+ +I GL +  
Sbjct: 690 EMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 749

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K  +A     E+ + G+IP+  T+ T+I G    G +  A     +       PD  + N
Sbjct: 750 KYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFN 809

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF---GLLSEM 421
            L+ G+       +A + F    L+G  ++  T  +L+ +L K   LE A     +LSE+
Sbjct: 810 ALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSEI 869

Query: 422 EEKK 425
            + +
Sbjct: 870 AKSQ 873



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 235/526 (44%), Gaps = 24/526 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL-VPNRTTYNILVSGYCKLGWLKEAMR 66
           PD   YN +L   F    L  +  +L +M   G  +PN      LV+   +   L++A R
Sbjct: 108 PD--AYNAVLP--FLSHDLAALEKVLEEMSHLGYGLPNPAC-AALVATLVRSRRLEDAFR 162

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M   K  P    Y +LI     A   E A  L ++M+ +     V  + TL+    
Sbjct: 163 VIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALA 222

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+   A  L+DE+    ++P+ V +N+ I  + K G +D A K    ++ +G  PD V
Sbjct: 223 REGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDV 282

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +Y +++   CKAG + EA  +   M  +         NT++      ++ D+AY LL   
Sbjct: 283 SYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERL 342

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +RG     VS+ +++T   +  K + AL L+D MK +   P+  TYN +I  L  +G+ 
Sbjct: 343 RERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRV 401

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  + +E+  +G+ P+  + N ++   C   Q+E+A +      E+   P+ VT   L
Sbjct: 402 NEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSL 461

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GL ++G ++ A + F   +  G   + + Y +LI +     R ED   +  EM  +  
Sbjct: 462 IDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG 521

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD          + ++G +E+ +     M   G +                 P   SYS
Sbjct: 522 RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL-----------------PDVRSYS 564

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I+     G+ ++   IF+   Q+G A++   Y  +++GL K  K
Sbjct: 565 ILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 238/475 (50%), Gaps = 4/475 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  +YN ++  +++ G+  +  ++  +M ++ ++PN  TYN ++ G+ K G L+   R+
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M  +   P+  TYN+L++G C AG + E   L  EM S K++PD  TY+ L +    
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  +  ++G+     T +I++   CK+GK+  A ++++++   G  P  V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+ G +E AF     M  + +K + IT N +++ LC  +++  A  LL    
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G      ++ TLI  Y R  +  +   +  EM+E  + P+  +Y +++    ++GK  
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L+++    ++P+   +N II  +   G  ++A     KM      P IVT N+L+
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC +  + +A +   S        D+V+YNTLIS+ C    ++ A  L   M +  + 
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN----HQVVQPNTSKTPEEI 478
               TY  + + L  +GRL E +     M++   +     H ++    SK   EI
Sbjct: 481 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 535



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 247/510 (48%), Gaps = 18/510 (3%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP 78
           AL   G+  +VR     +   G  P+   +N  V      G L EA+ ++  M ++ + P
Sbjct: 1   ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60

Query: 79  -DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
            + ++YN++I G   AG   +A  +  EM    +LP+ +TYNT+I+   + G     F+L
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            D++  HG+KPNA+T+N+++   C+ G++ +   ++  M      PD  TY+ L D   +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G+ +    +     + G+ +   T + +L+ LC + K+  A  +L S    G     V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI GY +  +   A   + +MK R I P   TYNA+I GL ++ +   A D+L E+ 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
            +G+ P   TFNT+I  +   GQ+EK     ++M E   KP++V+   +++  C+ G + 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A+        K    ++  YN +I +  +    + AF L+ +M+   + P   TY  + 
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L    ++ EA++  + +      NH+++            P ++SY+  I+  C +G 
Sbjct: 421 KGLCNQSQISEAEEIINSLS-----NHRLI------------PDAVSYNTLISACCYRGN 463

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              AL + +   + GI     TY  L++GL
Sbjct: 464 IDKALDLQQRMHKYGIKSTVRTYHQLISGL 493



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 217/454 (47%), Gaps = 35/454 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+++TYNT++D   K G L     L   M   GL PN  TYN+L+SG C+ G + E   
Sbjct: 95  LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 154

Query: 67  VVDLMTQNKSLPDVWTYNML-----------------------------------INGWC 91
           ++D M   K +PD +TY++L                                   +NG C
Sbjct: 155 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 214

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +  A  + + + +  L+P  V YNTLIN + ++G    AF    ++    IKP+ +
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 274

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I   CK  +I  A  ++  M++NG +P   T+NTLIDA  + G +E+ F ++  M
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GLK N ++  +I++  C   K+ EA  +L+    +    +   Y  +I  Y      
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 394

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           ++A  L ++MK   I PS  TYN +I GL    +  +A +++N L    +IPD  ++NT+
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 454

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C  G ++KAL    +M +   K  + T + L+SGL   G L +    ++  +    
Sbjct: 455 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 514

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
              +  +N ++ +  K      A  L  EM +K+
Sbjct: 515 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 212/446 (47%), Gaps = 20/446 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP-NAVTHNIMIKWYCKEGKIDKACK 171
           PD   +N  +     +G   EA  ++  +   G  P NA ++N++I    + G+   A +
Sbjct: 25  PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 84

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           +   M E    P+ +TYNT+ID + K G++E  FR+ D M   GLK N IT N +L  LC
Sbjct: 85  VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 144

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              ++ E   LL+  + +    D  +Y  L  G  R+  +   L L+ +  +  +    +
Sbjct: 145 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 204

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T + ++ GL + GK   A ++L  L+ +G++P    +NT+I+G+C  G++E A     +M
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 264

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
             +  KPD +T N L++GLC+   +  A          G      T+NTLI +  +  +L
Sbjct: 265 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-----QKFTSIMVETGKINHQV 466
           E  F +LSEM+E  L P+  +Y +I  A  ++G++ EA       F   ++   ++ + +
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384

Query: 467 VQPNTSKTPEE-------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           +       P +             I PS ++Y+  I   C+Q +  +A +I        +
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 444

Query: 514 AINKSTYMNLMNGLIKRRKSISKAVD 539
             +  +Y  L++     R +I KA+D
Sbjct: 445 IPDAVSYNTLISACC-YRGNIDKALD 469



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 163/322 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  V YNT+++   + G+L         MK + + P+  TYN L++G CK   +  A
Sbjct: 233 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 292

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M  N   P V T+N LI+ +   G LE+ F +  EM+   L P+VV+Y +++N 
Sbjct: 293 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 352

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G+  EA  ++D++    + PNA  +N +I  Y + G  D+A  +V  M+ NG SP 
Sbjct: 353 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 412

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI   C    + EA  +++ +    L  + ++ NT++   C    +D+A  L  
Sbjct: 413 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 472

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G      +Y  LI+G     + N    L+ +M +  ++PS   +N M+   S+ G
Sbjct: 473 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 532

Query: 305 KTEQAIDMLNELLQSGMIPDET 326
              +A D+  E+LQ     D+T
Sbjct: 533 NEIKAEDLRKEMLQKRNNHDDT 554



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 127/233 (54%), Gaps = 5/233 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   T+NT++DA  + G+L +   +LS+M++ GL PN  +Y  +V+ +CK G 
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ ++D M     LP+   YN +I+ +   G  ++AF L ++M+S  + P +VTYN 
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 418

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA ++I+ L  H + P+AV++N +I   C  G IDKA  + + M + G
Sbjct: 419 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
                 TY+ LI     AG + E    M+ + +K ++ N +  N I H +  E
Sbjct: 479 IKSTVRTYHQLISGLGGAGRLNE----MEYLYQKMMQNNVVPSNAI-HNIMVE 526



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V+Y +I++A  K GK+ E   +L DM  + ++PN   YN ++  Y + G 
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 393

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +V+ M  N   P + TYN+LI G CN   + EA  +   + + +L+PD V+YNT
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 453

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A  L   + ++GIK    T++ +I      G++++   + + M +N 
Sbjct: 454 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 513

Query: 181 FSPDCVTYNTLIDANCKAGN 200
             P    +N +++A  K GN
Sbjct: 514 VVPSNAIHNIMVEAYSKYGN 533



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 72/141 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P  VTYN ++  L  + +++E  ++++ +    L+P+  +YN L+S  C  G 
Sbjct: 404 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 463

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M +      V TY+ LI+G   AG L E   L ++M    ++P    +N 
Sbjct: 464 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 523

Query: 121 LINRFFESGRSMEAFKLIDEL 141
           ++  + + G  ++A  L  E+
Sbjct: 524 MVEAYSKYGNEIKAEDLRKEM 544


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 209/385 (54%), Gaps = 2/385 (0%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P++ TYN++I   C  G ++ A    +EM      PDV TY+TL+N   +  R  EA  L
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G  PN VT N++I    K G + +A K+V NM   G  P+ VTYNTLI   C 
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A  +++ M       N +T  TI++ L  +++ ++   +L S  +RG   +E  
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 375

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y +LI+G F++ K+  A++LW EM E+   P+   Y A I GL +  K ++A D+L E+L
Sbjct: 376 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G +P+  T+++++ GF  +G  +KA+    +M+ +  + ++V C++LL+GLC  G L 
Sbjct: 436 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAA 435
           +AL  +   + +G   D V Y+++I  LC    ++    L  EM  +E K  PD  TY  
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 555

Query: 436 IHTALVESGRLEEAQKFTSIMVETG 460
           +  AL     L  A    + M++ G
Sbjct: 556 LFNALCRQDNLTRAIDLLNSMLDEG 580



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 230/467 (49%), Gaps = 23/467 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ +TYN I+ AL K G+++   D   +M  +   P+  TY+ L++G CK   + EA
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M     LP+  T+N+LI+     G L  A +L   M     +P+ VTYNTLI+ 
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A  L++++      PN VT+  +I    K+ + +    I+ +MEE G   +
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y++LI    K G  E A R+   M  KG K N +     +  LC ++K DEA  +L 
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G+  +  +Y +L+ G+F+   + +A+ +W EM  + +  +    + ++ GL +SG
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--VEKSFKPDIVT 362
           +  +A+ +   +L  G+ PD   ++++I G C  G V+K L+   +M   E   +PD+VT
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT---------------------L 401
            NIL + LCR+  L +A+    S + +G   DS+T N                      L
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 612

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +  L K  R   A  ++ EM  + L P+  T++ +     +  R+ E
Sbjct: 613 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 659



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 202/416 (48%), Gaps = 18/416 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GCLP+ VT+N ++DAL K G L+    L+ +M  +G VPN  TYN L+ G C  G 
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 318

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +++ M  +K +P+  TY  +ING       E+   +   ME      +   Y++
Sbjct: 319 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 378

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+  F+ G+S  A +L  E+ E G KPN V +   I   C++ K D+A  I++ M   G
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+  TY++L+    K G+ ++A  +   M  + ++ N +  + +L+ LC   +L EA 
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAMIW 298
            +       G   D V+Y ++I G       ++ LKL+ EM  +E +  P   TYN +  
Sbjct: 499 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 558

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE-GQVEKALQFHNKMVEKSFK 357
            L +     +AID+LN +L  G  PD  T N  +          +    F +++V +  K
Sbjct: 559 ALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLK 618

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                         RE  L  AL+     +L+    +  T++ +I   CK +R+ +
Sbjct: 619 --------------RERKLS-ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 659



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 58/282 (20%)

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE-KALQFHNK 350
           T+  +I   + S +      +L+ + + G +  ET F  +I   C +  +  +A+ F ++
Sbjct: 91  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIF-ILIFKACGKAHLPGEAVNFFHR 149

Query: 351 MV-EKSFKPDIVTCNILLSGLCREGILEKALKF--------------------------- 382
           M  +   K  + + N +L+ + +EG    A KF                           
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 209

Query: 383 -----------FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
                      FR   LK    D  TY+TL++ LCKERR+++A  LL EM+ +   P+  
Sbjct: 210 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 269

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           T+  +  AL ++G L  A K    M   G +                 P+ ++Y+  I+ 
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCV-----------------PNEVTYNTLIHG 312

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            C +G+   AL + E+        N+ TY  ++NGL+K+R++
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA 354


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 262/529 (49%), Gaps = 26/529 (4%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC P   ++NT+L+A  +  +     +     +   + PN  TYN+L+   CK G  ++
Sbjct: 107 FGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEK 166

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              ++  M      PD  TY  LI G   +G L  A  +  EM    + PDVV YN +I+
Sbjct: 167 GRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIID 226

Query: 124 RFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
            FF+ G  ++A ++ + L  E  + P+ V++N+MI   CK G+  +  +I   M++N   
Sbjct: 227 GFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERK 286

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            D  TY+ LI    +AG++  A ++ + M  +G++ + +T N +L+ LC    ++E + L
Sbjct: 287 CDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFEL 346

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                K     +  SY   + G F + K + A+ LWD + E      + TY  ++ GL  
Sbjct: 347 WEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCW 401

Query: 303 SGKTEQAIDMLNEL--LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +G   +A+ +L E    + GM  DE  ++++I+  C EG++++A      M ++  K + 
Sbjct: 402 NGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNS 461

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             CN+L+ G  +   L+ A+K FR    KG ++  V+YN LI+ L +  R  +A+  ++E
Sbjct: 462 HVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNE 521

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M EK   PD  TY+ +   L ES  ++ A +     ++TG                   P
Sbjct: 522 MLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGH-----------------KP 564

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             I Y+  I+  CS G+ +DALQ++   RQK   +N  T+  +M G  K
Sbjct: 565 DIIMYNIVIHRLCSSGKVEDALQLYSTLRQKK-CVNLVTHNTIMEGFYK 612



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 236/470 (50%), Gaps = 34/470 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKE 63
           G  PD V YN I+D  FK+G   +  ++   + ++ LV P+  +YN+++SG CK G   E
Sbjct: 213 GVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSE 272

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            + + + M +N+   D++TY+ LI+G   AG L  A ++ +EM    + PDVVT N ++N
Sbjct: 273 GLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLN 332

Query: 124 RFFESGRSMEAFKLIDELD------------------EHG------------IKPNAVTH 153
              ++G   E F+L +E+                   E+G            ++ ++ T+
Sbjct: 333 GLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATY 392

Query: 154 NIMIKWYCKEGKIDKACKIVRNME--ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +++   C  G +++A +++   E  E G   D   Y++LI+A CK G ++EA  ++++M
Sbjct: 393 GVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELM 452

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            ++G K N+   N ++       KLD A  +    S +G  L  VSY  LI G  R E+ 
Sbjct: 453 NKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERF 512

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A    +EM E+   P   TY+ +I GL +S   + A+ + ++ L +G  PD   +N +
Sbjct: 513 REAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIV 572

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IH  CS G+VE ALQ ++ + +K    ++VT N ++ G  + G  E A K +   +    
Sbjct: 573 IHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDEL 631

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             D ++YN  +  LC   R+ DA G L +   +   P   T+  +  A++
Sbjct: 632 QPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVI 681



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 262/554 (47%), Gaps = 51/554 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++  + KKG+  + R LL+ M   G+ P+R TY  L+ G  K G L  A+ V
Sbjct: 146 PNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEV 205

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLINRFF 126
            D M +    PDV  YNM+I+G+   G   +A  + + +   +L+ P VV+YN +I+   
Sbjct: 206 FDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLC 265

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + GR  E  ++ + + ++  K +  T++ +I    + G +  A K+   M   G  PD V
Sbjct: 266 KCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVV 325

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGR-------------KGL----------------- 216
           T N +++  CKAGN+EE F + + MG+             KGL                 
Sbjct: 326 TCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLL 385

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKR--GYYLDEVSYGTLITGYFRDEKANRA 274
           + ++ T   ++H LC    ++ A  +L  A  R  G  +DE +Y +LI    ++ + + A
Sbjct: 386 EADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEA 445

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             + + M +R    ++   N +I G  +  K + A+ +  E+   G      ++N +I+G
Sbjct: 446 DGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILING 505

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
                +  +A    N+M+EK +KPDI+T + L+ GL    +++ AL+ +  ++  G   D
Sbjct: 506 LLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPD 565

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            + YN +I  LC   ++EDA  L S + +KK   +  T+  I     + G  E A K  +
Sbjct: 566 IIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWA 624

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            ++E                 +E+ P  ISY+  +   CS GR  DA+   ++   +G  
Sbjct: 625 HILE-----------------DELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFL 667

Query: 515 INKSTYMNLMNGLI 528
               T+  L+  +I
Sbjct: 668 PTAITWNILVRAVI 681



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 214/452 (47%), Gaps = 28/452 (6%)

Query: 86  LINGWCNAGMLEEAFRLRKEMESL-KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           L+  +    M  EA  + + M  +    P + ++NTL+N F ES +   A       +  
Sbjct: 83  LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAA 142

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
            + PN  T+N+++K  CK+G+ +K   ++  M   G SPD +TY TLI    K+G++  A
Sbjct: 143 RVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFA 202

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-YMLLNSASKRGYYLDEVSYGTLIT 263
             + D M  +G++ + +  N I+          +A  M      +   +   VSY  +I+
Sbjct: 203 LEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMIS 262

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           G  +  + +  L++W+ MK+ +     FTY+A+I GLS++G    A  +  E++  G+ P
Sbjct: 263 GLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRP 322

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D  T N +++G C  G VE+  +   +M + S + ++ + NI L GL   G ++ A+  +
Sbjct: 323 DVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLW 381

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG--PDRYTYAAIHTALV 441
              +      DS TY  ++  LC    +  A  +L E E ++ G   D + Y+++  AL 
Sbjct: 382 DGLL----EADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALC 437

Query: 442 ESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
           + GRL+EA     +M + G K N  V                   +  I+      +   
Sbjct: 438 KEGRLDEADGVVELMNKRGCKFNSHVC------------------NVLIDGFVKHSKLDS 479

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A+++F E   KG ++   +Y  L+NGL++  +
Sbjct: 480 AVKVFREMSGKGCSLTVVSYNILINGLLRAER 511



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 105/194 (54%), Gaps = 1/194 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC    V+YN +++ L +  +  E  D +++M ++G  P+  TY+ L+ G  +   
Sbjct: 487 MSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNM 546

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+R+          PD+  YN++I+  C++G +E+A +L   +   K + ++VT+NT
Sbjct: 547 MDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNT 605

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  F++ G    A K+   + E  ++P+ +++NI +K  C  G++  A   + +    G
Sbjct: 606 IMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRG 665

Query: 181 FSPDCVTYNTLIDA 194
           F P  +T+N L+ A
Sbjct: 666 FLPTAITWNILVRA 679


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 256/537 (47%), Gaps = 33/537 (6%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           + V  + +   L   GK  +   ++ +M  +G +P+ +TY+ ++   C    +  A  + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M  N  +PDV+TY +LI+ +C  G+L++A +   EM      P+VVTY  LI+ + ++
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC--- 185
            +   A +L + +   G  PN VT+  +I  +CK G+I+KAC+I   M  N   PD    
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 186 -------------VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
                         TY  L+D  CKA  ++EA  ++DVM  +G + N I  + ++   C 
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             KLDEA M+    S+RGY  +  +Y +LI   F+D++ + ALK+   M E    P+   
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  MI GL + GKT++A  +++ + + G  P+  T+  +I GF   G+V+K L+   +M 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K   P+ VT  +L++  C  G+L+ A +                Y  +I    +E  + 
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII- 862

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            + GLL E+ E    P    Y  +  +  ++GRLE A +            H+ +   TS
Sbjct: 863 -SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALEL-----------HKEMSSCTS 910

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +  + D     YS  I       +   A +++ +  ++G     S +  L+ GLI+
Sbjct: 911 YSAADKD----LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 247/576 (42%), Gaps = 74/576 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V Y  ++  L +     E  D LS M+    +PN  TY IL+ G  +   L    R++
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR---- 124
            +M      P    +N LI+ +C +G    A++L K+M      P  V YN LI      
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 125 -------------------------------------FFESGRSMEAFKLIDELDEHGIK 147
                                                   +G+  +A+ +I E+   G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+  T++ +I   C   K+D A  +   M+ N   PD  TY  LID+ CK G +++A + 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D M R G   N +T   ++H     +K+  A  L       G   + V+Y  LI G+ +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 268 DEKANRALKLWDEMKERQIMPST----------------FTYNAMIWGLSQSGKTEQAID 311
             +  +A +++  M+    +P                  FTY A++ GL ++ K ++A D
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+ +   G  P+   ++ +I GFC  G++++A     KM E+ + P++ T + L+  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           ++  L+ ALK     +    A + + Y  +I  LCK  + ++A+ L+S MEEK   P+  
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY A+     ++G++++  +    M   G                   P+ ++Y   IN 
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMGAKG-----------------CAPNFVTYRVLINH 820

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            C+ G   DA Q+ +E +Q     + + Y  ++ G 
Sbjct: 821 CCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 251/589 (42%), Gaps = 77/589 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++  G  P  +TYN ++    +  +L+    +  +M   G   +  T    V   CK G 
Sbjct: 223 LKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR 282

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ +++   + +   D   Y  +I+G C A + EEA      M S   +P+VVTY  
Sbjct: 283 WREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRI 339

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+       +     +++  +   G  P+    N +I  YC+ G    A K+++ M + G
Sbjct: 340 LLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 181 FSPDCVTYNTLI--------------------------DAN---------------CKAG 199
             P  V YN LI                          DA+               C AG
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAG 459

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
             E+A+ ++  M  KG   +T T + ++  LC   K+D A++L           D  +Y 
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI  + +     +A K +DEM      P+  TY A+I    ++ K   A ++   +L  
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--------VEKSFK--------PDIVTC 363
           G IP+  T+  +I G C  GQ+EKA Q + +M        V+  FK        P+I T 
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GLC+   +++A        ++G   + + Y+ LI   CK  +L++A  + ++M E
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +  GP+ YTY+++   L +  RL+ A K  S M+E                     P+ I
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-----------------SCAPNVI 742

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            Y+E I+  C  G+  +A ++     +KG   N  TY  +++G  K  K
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 20/396 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP----------------NRTTY 48
           GC+P+ VTY  ++D   K G++ +   + + M+    +P                N  TY
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             LV G CK   +KEA  ++D+M+     P+   Y+ LI+G+C  G L+EA  +  +M  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
               P+V TY++LI+R F+  R   A K++  + E+   PN + +  MI   CK GK D+
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A +++  MEE G  P+ VTY  +ID   KAG +++   +M  MG KG   N +T   +++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C    LD+A+ LL+   +  +      Y  +I G+ R+     +L L DE+ E   +P
Sbjct: 820 HCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVP 877

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNEL--LQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
               Y  +I    ++G+ E A+++  E+    S    D+  ++++I       +V+KA +
Sbjct: 878 IIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFE 937

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            +  M+++   P++     L+ GL R    E+AL+ 
Sbjct: 938 LYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 230/528 (43%), Gaps = 51/528 (9%)

Query: 49  NILVSGYCKLG-W---LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK 104
           N+L+   C+ G W   L+E  R+ DL  +    P   TYN L+  +  A  L+ A+ + +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYK----PSRLTYNALVRVFLEADRLDTAYLVHR 256

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           EM       D  T    ++   ++GR  EA  LI++ +    K + V +  MI   C+  
Sbjct: 257 EMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEAS 313

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
             ++A   +  M  +   P+ VTY  L+    +   +    R++ +M  +G   +    N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR------ALKLW 278
           +++H  C       AY LL      G     V Y  LI G   +EK         A K +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            EM +  ++ +    + +   L  +GK E+A  ++ E++  G IPD +T++ +I   C+ 
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
            +V+ A     +M      PD+ T  IL+   C+ G+L++A K+F   +  G A + VTY
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM-- 456
             LI +  K R++  A  L   M  +   P+  TY A+     +SG++E+A +  + M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 457 ------------VETGKIN-----------------HQVVQPN---TSKTPEEIDPSSIS 484
                       ++ G I                  H+V +        + E  +P+ I 
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y   I+  C  G+  +A  +F +  ++G   N  TY +L++ L K ++
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 42/341 (12%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC P+++ Y+ ++D   K GKL+E + + + M ++G  PN  TY+ L+    K   L  A
Sbjct: 666  GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++V+  M +N   P+V  Y  +I+G C  G  +EA+RL   ME     P+VVTY  +I+ 
Sbjct: 726  LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN----- 179
            F ++G+  +  +L+ ++   G  PN VT+ ++I   C  G +D A +++  M++      
Sbjct: 786  FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 180  ---------GFS-------------------PDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                     GF+                   P    Y  LID+ CKAG +E A  +   M
Sbjct: 846  MAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 212  GR--KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                     +    ++++ +L    K+D+A+ L     KRG   +   +  L+ G  R  
Sbjct: 906  SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965

Query: 270  KANRALKLWDEMKERQI-------MPSTFTYNAMIWGLSQS 303
            +   AL+L D + +  +       + S+  Y  + W L  +
Sbjct: 966  RWEEALQLSDCICQMMVDFVREGFLGSSHDYEFLNWTLCST 1006



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 4/213 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+ VTY  ++D   K GK+++  +L+  M  +G  PN  TY +L++  C  G 
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A +++D M Q      +  Y  +I G+    ++  +  L  E+     +P +  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRI 884

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVT--HNIMIKWYCKEGKIDKACKIVRNMEE 178
           LI+ F ++GR   A +L  E+        A    ++ +I+      K+DKA ++  +M +
Sbjct: 885 LIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIK 944

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            G  P+   +  L+    +    EEA ++ D +
Sbjct: 945 RGGIPELSIFFYLVKGLIRINRWEEALQLSDCI 977


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 238/475 (50%), Gaps = 4/475 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  +YN ++  +++ G+  +  ++  +M ++ ++PN  TYN ++ G+ K G L+   R+
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M  +   P+  TYN+L++G C AG + E   L  EM S K++PD  TY+ L +    
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  +  ++G+     T +I++   CK+GK+  A ++++++   G  P  V 
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+ G +E AF     M  + +K + IT N +++ LC  +++  A  LL    
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G      ++ TLI  Y R  +  +   +  EM+E  + P+  +Y +++    ++GK  
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L+++    ++P+   +N II  +   G  ++A     KM      P IVT N+L+
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC +  + +A +   S        D+V+YNTLIS+ C    ++ A  L   M +  + 
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN----HQVVQPNTSKTPEEI 478
               TY  + + L  +GRL E +     M++   +     H ++    SK   EI
Sbjct: 618 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 672



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 255/527 (48%), Gaps = 18/527 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E    LP   + N +L+AL   G+  +VR     +   G  P+   +N  V      G L
Sbjct: 121 EARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDL 180

Query: 62  KEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            EA+ ++  M ++ + P + ++YN++I G   AG   +A  +  EM    +LP+ +TYNT
Sbjct: 181 GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNT 240

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G     F+L D++  HG+KPNA+T+N+++   C+ G++ +   ++  M    
Sbjct: 241 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 300

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY+ L D   + G+ +    +     + G+ +   T + +L+ LC + K+  A 
Sbjct: 301 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 360

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L S    G     V Y TLI GY +  +   A   + +MK R I P   TYNA+I GL
Sbjct: 361 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ +   A D+L E+  +G+ P   TFNT+I  +   GQ+EK     ++M E   KP++
Sbjct: 421 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 480

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+   +++  C+ G + +A+        K    ++  YN +I +  +    + AF L+ +
Sbjct: 481 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 540

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+   + P   TY  +   L    ++ EA++  + +      NH+++            P
Sbjct: 541 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS-----NHRLI------------P 583

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++SY+  I+  C +G    AL + +   + GI     TY  L++GL
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 630



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 217/454 (47%), Gaps = 35/454 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+++TYNT++D   K G L     L   M   GL PN  TYN+L+SG C+ G + E   
Sbjct: 232 LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 291

Query: 67  VVDLMTQNKSLPDVWTYNML-----------------------------------INGWC 91
           ++D M   K +PD +TY++L                                   +NG C
Sbjct: 292 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 351

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +  A  + + + +  L+P  V YNTLIN + ++G    AF    ++    IKP+ +
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 411

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I   CK  +I  A  ++  M++NG +P   T+NTLIDA  + G +E+ F ++  M
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GLK N ++  +I++  C   K+ EA  +L+    +    +   Y  +I  Y      
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 531

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           ++A  L ++MK   I PS  TYN +I GL    +  +A +++N L    +IPD  ++NT+
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 591

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C  G ++KAL    +M +   K  + T + L+SGL   G L +    ++  +    
Sbjct: 592 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 651

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
              +  +N ++ +  K      A  L  EM +K+
Sbjct: 652 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 236/497 (47%), Gaps = 22/497 (4%)

Query: 64  AMRVV-DLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           A+R++ DL  + ++ LP + + N+L+    + G   +  R    + S    PD   +N  
Sbjct: 111 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 170

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKP-NAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +     +G   EA  ++  +   G  P NA ++N++I    + G+   A ++   M E  
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYNT+ID + K G++E  FR+ D M   GLK N IT N +L  LC   ++ E  
Sbjct: 231 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 290

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+  + +    D  +Y  L  G  R+  +   L L+ +  +  +    +T + ++ GL
Sbjct: 291 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 350

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK   A ++L  L+ +G++P    +NT+I+G+C  G++E A     +M  +  KPD 
Sbjct: 351 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 410

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L++GLC+   +  A          G      T+NTLI +  +  +LE  F +LSE
Sbjct: 411 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 470

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA-----QKFTSIMVETGKINHQVVQPNTSKTP 475
           M+E  L P+  +Y +I  A  ++G++ EA       F   ++   ++ + ++       P
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530

Query: 476 EE-------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
            +             I PS ++Y+  I   C+Q +  +A +I        +  +  +Y  
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 590

Query: 523 LMNGLIKRRKSISKAVD 539
           L++     R +I KA+D
Sbjct: 591 LISACC-YRGNIDKALD 606



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 163/322 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  V YNT+++   + G+L         MK + + P+  TYN L++G CK   +  A
Sbjct: 370 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 429

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M  N   P V T+N LI+ +   G LE+ F +  EM+   L P+VV+Y +++N 
Sbjct: 430 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 489

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G+  EA  ++D++    + PNA  +N +I  Y + G  D+A  +V  M+ NG SP 
Sbjct: 490 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 549

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI   C    + EA  +++ +    L  + ++ NT++   C    +D+A  L  
Sbjct: 550 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 609

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G      +Y  LI+G     + N    L+ +M +  ++PS   +N M+   S+ G
Sbjct: 610 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 669

Query: 305 KTEQAIDMLNELLQSGMIPDET 326
              +A D+  E+LQ     D+T
Sbjct: 670 NEIKAEDLRKEMLQKRNNHDDT 691



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 127/233 (54%), Gaps = 5/233 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   T+NT++DA  + G+L +   +LS+M++ GL PN  +Y  +V+ +CK G 
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ ++D M     LP+   YN +I+ +   G  ++AF L ++M+S  + P +VTYN 
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 555

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA ++I+ L  H + P+AV++N +I   C  G IDKA  + + M + G
Sbjct: 556 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
                 TY+ LI     AG + E    M+ + +K ++ N +  N I H +  E
Sbjct: 616 IKSTVRTYHQLISGLGGAGRLNE----MEYLYQKMMQNNVVPSNAI-HNIMVE 663



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V+Y +I++A  K GK+ E   +L DM  + ++PN   YN ++  Y + G 
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +V+ M  N   P + TYN+LI G CN   + EA  +   + + +L+PD V+YNT
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 590

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A  L   + ++GIK    T++ +I      G++++   + + M +N 
Sbjct: 591 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 650

Query: 181 FSPDCVTYNTLIDANCKAGN 200
             P    +N +++A  K GN
Sbjct: 651 VVPSNAIHNIMVEAYSKYGN 670



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 72/141 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P  VTYN ++  L  + +++E  ++++ +    L+P+  +YN L+S  C  G 
Sbjct: 541 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 600

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M +      V TY+ LI+G   AG L E   L ++M    ++P    +N 
Sbjct: 601 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 660

Query: 121 LINRFFESGRSMEAFKLIDEL 141
           ++  + + G  ++A  L  E+
Sbjct: 661 MVEAYSKYGNEIKAEDLRKEM 681


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 249/526 (47%), Gaps = 21/526 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK----QGLVPNRTTYNILVSGYCKLGWL 61
           C P  V  N +L+ L K GK++    L   M +     G V +  T +I+V G C LG +
Sbjct: 162 CFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKI 221

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +E  R++        +P V  YNM+I+G+C  G L+ A R   E++   +LP V TY  L
Sbjct: 222 EEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGAL 281

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN F ++G      +L+ E+   G+  N    N +I    K G + +A +++R M E G 
Sbjct: 282 INGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGC 341

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD  TYN +I+ +CK G +EEA  +++    +GL  N  +   ++H  C +    +A  
Sbjct: 342 GPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASG 401

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L   ++ G   D VSYG  I G     + + AL + ++M E+ + P    YN ++ GL 
Sbjct: 402 MLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLC 461

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+      +L+E+L   + PD   F T+I GF   G++++A++    ++ K   P IV
Sbjct: 462 KKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIV 521

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++ G C+ G +  AL           A D  TY+T+I    K+  +  A  +  +M
Sbjct: 522 GYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 581

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            + K  P+  TY ++     +   +  A+K  S M                    ++ P+
Sbjct: 582 MKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGM-----------------KSFDLVPN 624

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++Y+  +      G+ + A  IFE     G   N +T+  L+NGL
Sbjct: 625 VVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 265/564 (46%), Gaps = 32/564 (5%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G G + DN T + ++  L   GK+ E R L+     +  VP+   YN+++ GYCK G L
Sbjct: 197 DGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDL 256

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + A R ++ +     LP V TY  LING+C AG  E   +L  EM +  L  +V  +N +
Sbjct: 257 QCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNV 316

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+  ++ G   EA +++  + E G  P+  T+NIMI + CK G+I++A +++   +E G 
Sbjct: 317 IDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGL 376

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+  +Y  L+ A CK G+  +A  M+  +   G K + ++    +H +    ++D A M
Sbjct: 377 LPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALM 436

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +     ++G + D   Y  L++G  +  +      L  EM +R + P  + +  +I G  
Sbjct: 437 VREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFI 496

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G+ ++AI +   +++ G+ P    +N +I GFC  G++  AL   N+M      PD  
Sbjct: 497 RNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEY 556

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T + ++ G  ++  +  ALK F   +      + +TY +LI+  CK+  +  A  + S M
Sbjct: 557 TYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGM 616

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN-----HQVVQ--PNTSKT 474
           +   L P+  TY  +     ++G+ E A     +M+  G +      H ++    NT+ +
Sbjct: 617 KSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATS 676

Query: 475 PEEI-------------------------DPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           P  I                         D    +Y+  I   C  G    A  +  +  
Sbjct: 677 PVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKML 736

Query: 510 QKGIAINKSTYMNLMNGLIKRRKS 533
            KG  I+   +  L++GL  + KS
Sbjct: 737 TKGFLIDSVCFTALLHGLCHKGKS 760



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 254/569 (44%), Gaps = 57/569 (10%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTY--------------- 48
           F C  D V ++++L  L       E+  +L +MK Q L P R  +               
Sbjct: 89  FSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDR 148

Query: 49  ---------------------NILVSGYCKLGWLKEAMRVVDLMTQNK----SLPDVWTY 83
                                N+L++G  K G +  A+++ D M Q      ++ D +T 
Sbjct: 149 ALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTT 208

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           ++++ G CN G +EE  RL K       +P VV YN +I+ + + G    A + ++EL  
Sbjct: 209 SIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKM 268

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ P   T+  +I  +CK G+ +   +++  M   G + +   +N +IDA  K G + E
Sbjct: 269 KGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTE 328

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A  M+  M   G   +  T N +++  C   +++EA  LL  A +RG   ++ SY  L+ 
Sbjct: 329 AAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMH 388

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
            Y +     +A  +   + E        +Y A I G+  +G+ + A+ +  ++++ G+ P
Sbjct: 389 AYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFP 448

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D   +N ++ G C +G++       ++M++++ +PD+     L+ G  R G L++A+K F
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +  I KG     V YN +I   CK  ++ DA   L+EM      PD YTY+ +    V+ 
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQ 568

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
             +  A K    M++                  +  P+ I+Y+  IN  C +     A +
Sbjct: 569 HDMSSALKMFGQMMK-----------------HKFKPNVITYTSLINGFCKKADMIRAEK 611

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +F   +   +  N  TY  L+ G  K  K
Sbjct: 612 VFSGMKSFDLVPNVVTYTTLVGGFFKAGK 640



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 229/489 (46%), Gaps = 32/489 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TYN +++   K G++ E  +LL   K++GL+PN+ +Y  L+  YCK G 
Sbjct: 336 MAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGD 395

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  ++  + +     D+ +Y   I+G   AG ++ A  +R++M    + PD   YN 
Sbjct: 396 YVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNI 455

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + GR      L+ E+ +  ++P+      +I  + + G++D+A KI + +   G
Sbjct: 456 LMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKG 515

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V YN +I   CK G M +A   ++ M       +  T +T++     +  +  A 
Sbjct: 516 VDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSAL 575

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     K  +  + ++Y +LI G+ +     RA K++  MK   ++P+  TY  ++ G 
Sbjct: 576 KMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGF 635

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS--------------EGQVEKALQ 346
            ++GK E+A  +   +L +G +P++ TF+ +I+G  +              E +    L 
Sbjct: 636 FKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILD 695

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
           F   M+   +   I   N ++  LC+ G ++ A       + KG  +DSV +  L+  LC
Sbjct: 696 FFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLC 755

Query: 407 KERRLEDAFGLLS------EME---EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
            + + ++   ++S      E++   +  L  D+Y Y          GRL EA      +V
Sbjct: 756 HKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLY---------QGRLSEASVILQTLV 806

Query: 458 ETGKINHQV 466
           E  K + QV
Sbjct: 807 EDSKFSDQV 815


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 240/456 (52%), Gaps = 12/456 (2%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDL-LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           D +T+  +L  L    + ++  D+ L  M + G +P+  +YN L+ G C     +EA+ +
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL 185

Query: 68  VDLMTQNK---SLPDVWTYNMLINGWCNAGMLEE--AFRLRKEMESLK------LLPDVV 116
           + +M  ++   S PDV +YN ++NG+   G+  +  A  + K ME L       ++PD +
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCM 245

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TYN++++ +  SG+  EA   + ++   G++PN VT++ ++ + CK G+  +A KI  +M
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
            + G  PD  TY TL+  +CK G + E+ ++ D+M R G+K + IT NT++   C   K+
Sbjct: 306 TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 365

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  LL S    G   D V+YGTLI GY R  + + AL L+ EM    + P+  TYN +
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           + GL  + +T  A ++   + +SG   + +T+N I+HG C     ++AL+    +     
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 485

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           + +  T NI++  L + G +++A   F +    G   D  TY+ +  +L ++  LE+   
Sbjct: 486 QLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDD 545

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           L   MEE     D     +I   L++ G +  A  +
Sbjct: 546 LFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 581



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 241/465 (51%), Gaps = 12/465 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TY  ++    + G+L+     L ++ K+G   +  T+  L+ G C      +AM +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK---LLPDVVTYNTLIN 123
           V   MT+   +PDV++YN L+ G C+    +EA  L   M   +     PDVV+YNT++N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 124 RFFESG-------RSME-AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            FF+ G       ++M+ A ++++ + ++G+ P+ +T+N ++  YC  G+  +A   ++ 
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M  +G  P+ VTY++L++  CK G   EA ++ D M ++GL+ +  T  T+L   C E +
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + E+  L +   + G   D ++Y TLI G     K + A KL   M    + P   TY  
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I G  +  + + A+ +  E++ SG+ P+  T+N I+ G     +   A + +  + +  
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            + ++ T NI+L GLC+  + ++AL+ F++  L    +++ T+N +I +L K  R+++A 
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 509

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L +      L PD  TY+ +   L+E G LEE       M E G
Sbjct: 510 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 554



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 229/435 (52%), Gaps = 11/435 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLL---SDMKKQGLVPNRTTYNILVSGYCK 57
           M   GC+PD  +YN +L  L  + +  E  +LL   +D +  G  P+  +YN +++G+ K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 58  LG--------WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
            G         + +AM V++ M +N  +PD  TYN +++G+C++G  +EA    K+M S 
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
            + P+VVTY++L+N   ++GRS EA K+ D + + G++P+  T+  +++ +CKEG++ ++
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
            K+   M   G  PD +TYNTLID  C AG M+EA +++  M   G+K + +T  T+++ 
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 393

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C   ++D+A  L       G   + ++Y  ++ G F   +   A +L+  + +      
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 453

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TYN ++ GL ++  T++A+ M   L  + +  +  TFN +I      G++++A     
Sbjct: 454 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFA 513

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
                   PD+ T +++   L  +G LE+    F S    G + DS   N+++  L +  
Sbjct: 514 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 573

Query: 410 RLEDAFGLLSEMEEK 424
            +  A   L  ++EK
Sbjct: 574 DITRAGTYLFMIDEK 588



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 175/363 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +TYN+IL      G+  E    L  M+  G+ PN  TY+ L++  CK G   EA
Sbjct: 239 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 298

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D MT+    PD+ TY  L+ G C  G + E+ +L   M  + + PD++TYNTLI+ 
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G+  EA KL+  +   G+KP+ VT+  +I  YC+  ++D A  + + M  +G SP+
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN ++           A  +   + + G ++   T N ILH LC     DEA  +  
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 478

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           +       L+  ++  +I    +  + + A  L+       ++P   TY+ M   L + G
Sbjct: 479 NLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 538

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+  D+   + ++G   D    N+I+      G + +A  +   + EK F  +  T +
Sbjct: 539 SLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTAS 598

Query: 365 ILL 367
            LL
Sbjct: 599 FLL 601



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 180/363 (49%), Gaps = 12/363 (3%)

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
           K+ P V TY  LI     +GR    F  +  + + G + +A+T   ++K  C + +   A
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 170 CKIV-RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK---GLKMNTITLNT 225
             IV R M E G  PD  +YN L+   C     +EA  ++ +M      G   + ++ NT
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 226 IL--------HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
           +L         T    + +D+A  +LN+  K G   D ++Y +++ GY    +   A+  
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             +M+   + P+  TY++++  L ++G++ +A  + + + + G+ PD  T+ T++ G C 
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           EG+V ++ +  + MV    KPDI+T N L+ G C  G +++A K   S +  G   D VT
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y TLI+  C+  R++DA  L  EM    + P+  TY  I   L  + R   A++    + 
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446

Query: 458 ETG 460
           ++G
Sbjct: 447 KSG 449



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 184/366 (50%), Gaps = 29/366 (7%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
           +P   TY  LI   C+AG ++  F  +  + +KG +++ IT   +L  LC +K+  +A  
Sbjct: 89  TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ---IMPSTFTYNAMI 297
           ++L   ++ G   D  SY  L+ G   + ++  AL+L   M + +     P   +YN ++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208

Query: 298 WGLSQSG----KTEQAID----MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
            G  + G     T QA+D    +LN ++++G++PD  T+N+I+HG+CS GQ ++A+    
Sbjct: 209 NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 268

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           KM     +P++VT + L++ LC+ G   +A K F S   +G   D  TY TL+   CKE 
Sbjct: 269 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEG 328

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+ ++  L   M    + PD  TY  +      +G+++EA K  + MV  G         
Sbjct: 329 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG--------- 379

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + P  ++Y   IN +C   R  DAL +F+E    G++ N  TY  ++ GL  
Sbjct: 380 --------VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 431

Query: 530 RRKSIS 535
            R++ +
Sbjct: 432 TRRTAA 437



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 192/399 (48%), Gaps = 35/399 (8%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P   T+ I+I   C+ G++D     + N+ + GF  D +T+  L+   C      +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA- 146

Query: 206 RMMDVMGRK----GLKMNTITLNTILHTLCCEKKLDEAYMLLN-SASKR--GYYLDEVSY 258
             MD++ R+    G   +  + N +L  LC E +  EA  LL+  A  R  G   D VSY
Sbjct: 147 --MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 259 GTLITGYFRD--------EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            T++ G+F++        +  ++A+++ + M +  +MP   TYN+++ G   SG+ ++AI
Sbjct: 205 NTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 264

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
             L ++   G+ P+  T++++++  C  G+  +A +  + M ++  +PDI T   LL G 
Sbjct: 265 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGH 324

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+EG + ++ K F   +  G   D +TYNTLI   C   ++++A  LL+ M    + PD 
Sbjct: 325 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 384

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY  +        R+++A      MV +G                 + P+ I+Y+  + 
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSG-----------------VSPNIITYNIILQ 427

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 R   A +++    + G  +  STY  +++GL K
Sbjct: 428 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 466



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TYNT++D     GK++E   LL+ M   G+ P+  TY  L++GYC++  
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI--------------------------------- 87
           + +A+ +   M  +   P++ TYN+++                                 
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 459

Query: 88  --NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
             +G C   + +EA R+ + +    L  +  T+N +I    + GR  EA  L      +G
Sbjct: 460 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 519

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+  T+++M +   ++G +++   +  +MEENG S D    N+++    + G++  A 
Sbjct: 520 LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAG 579

Query: 206 RMMDVMGRKGLKMNTITLNTILHT 229
             + ++  K   +   T + +L +
Sbjct: 580 TYLFMIDEKHFSLEASTASFLLES 603



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 29/262 (11%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           ++ P+  TY  +I    ++G+ +     L  +++ G   D  TF  ++ G C++ +   A
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 345 LQF-HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK---GKAVDSVTYNT 400
           +     +M E    PD+ + N LL GLC E   ++AL+           G   D V+YNT
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 401 LISSLCKE--------RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +++   KE        + ++ A  +L+ M +  + PD  TY +I      SG+ +EA   
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
              M   G                 ++P+ ++YS  +N  C  GR  +A +IF+   ++G
Sbjct: 267 LKKMRSDG-----------------VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309

Query: 513 IAINKSTYMNLMNGLIKRRKSI 534
           +  + +TY  L+ G  K  + I
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVI 331



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 8/199 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN IL  LF   +    ++L   + K G     +TYNI++ G CK   
Sbjct: 410 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 469

Query: 61  LKEAMRVVDLMTQNKSLPDVW----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVV 116
             EA+R    M QN  L D+     T+N++I      G ++EA  L     +  L+PDV 
Sbjct: 470 TDEALR----MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 525

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           TY+ +     E G   E   L   ++E+G   ++   N +++   + G I +A   +  +
Sbjct: 526 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 585

Query: 177 EENGFSPDCVTYNTLIDAN 195
           +E  FS +  T + L++++
Sbjct: 586 DEKHFSLEASTASFLLESS 604


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 261/570 (45%), Gaps = 56/570 (9%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D VT  T++    +  +L+   ++  DM + G VP+    + ++ G  K G ++EA
Sbjct: 262 GVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEA 321

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   + + + +P+++ YN L+N  C  GM  EA RL  EM    L P+ VTY  LI+ 
Sbjct: 322 FRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHS 381

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +A  ++D + E G++     +N +I   CK+  +D A   +  M E G +P+
Sbjct: 382 LCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPN 441

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +Y+ +I   C+ G++  A  +   M  KG+  NT T   +++  C  KK+DEA  L N
Sbjct: 442 AASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFN 501

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++     +EV++  +I GY       +A +L+D+M  R + P  +TY ++I GL  + 
Sbjct: 502 KMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTD 561

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV------------ 352
              +A + + +L  +  + ++ +   ++HGFC EG++ +A    N+M             
Sbjct: 562 GASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFT 621

Query: 353 -----------------------EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
                                  EK  +PD V    +++   +EG + +AL  +   I  
Sbjct: 622 IIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIAD 681

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   ++VTY  L+++LCK   L  A  L  EM      P+ YT+          G LE A
Sbjct: 682 GHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETA 741

Query: 450 QKFTSIMVETGKINHQVVQPNT--------SKTPEEID-----------PSSISYSEKIN 490
           +     M++    N  +V  NT         +  E ID           P  ISYS  I+
Sbjct: 742 KDLYFAMLQGFLAN--IVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIH 799

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           E C +G   +A++++ E   KG+  +   Y
Sbjct: 800 ELCKKGDINEAIELWNEMLYKGVKPDIVAY 829



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 250/525 (47%), Gaps = 17/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D   Y   + A  +   L+  + L++ M+ +G   +   YN+L+ G CK   ++EA
Sbjct: 192 GVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREA 251

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V + M       D  T   L+ G+C    L+ A  +  +M  L  +P     + +++ 
Sbjct: 252 VDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDG 311

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  EAF+L  +L E  + PN   +N ++   CK G   +A ++V  M + G  P+
Sbjct: 312 LRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPN 371

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  LI + CK G M++A  M+D M  KG++M     N++++  C +  LD A   L+
Sbjct: 372 EVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLS 431

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   +  SY  +I G  R    + A++L  +M E+ +  +T+T+ A+I G  ++ 
Sbjct: 432 EMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAK 491

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A  + N++ +S + P+E TFN +I G+C  G + KA Q +++M+ +   PD  T  
Sbjct: 492 KMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYR 551

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+SGLC      KA +F          ++  +   L+   C+E RL +A+ + +EM   
Sbjct: 552 SLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMW 611

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
               D  ++  I  A ++    E++      M E G                 + P ++ 
Sbjct: 612 GGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKG-----------------VRPDNVF 654

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++  IN +  +G    AL  ++E    G   N  TY  L+N L K
Sbjct: 655 HTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCK 699



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 248/555 (44%), Gaps = 53/555 (9%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P+   YN +L+ + K G  +E   L+++M  +GL PN  TY IL+   CK G + +A+ 
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN------- 119
           ++D M +      V+ YN LIN  C    L+ A     EM  + L P+  +Y+       
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLC 453

Query: 120 ----------------------------TLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                                        LIN F ++ +  EA +L +++ E  ++PN V
Sbjct: 454 RKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEV 513

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T N +I+ YC  G I KA ++   M   G +PD  TY +LI   C      +A   +  +
Sbjct: 514 TFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                 +N  +L  +LH  C E +L EAY + N  +  G  LD +S+  ++    +   +
Sbjct: 574 ENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDS 633

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            ++  L+ EMKE+ + P    +  MI   S+ G   QA++  +E++  G +P+  T+  +
Sbjct: 634 EKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTAL 693

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           ++  C    +  A     +M+   F P+  T N  L     EG LE A   + + +L+G 
Sbjct: 694 VNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFA-MLQGF 752

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             + V+ NTLI   CK  ++++A  L+S   E    PD  +Y+ +   L + G + EA +
Sbjct: 753 LANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIE 812

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
             + M+  G                 + P  ++Y+  I      G     L I+ +  +K
Sbjct: 813 LWNEMLYKG-----------------VKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKK 855

Query: 512 GIAINKSTYMNLMNG 526
           G+  N  T+  L  G
Sbjct: 856 GVQPNWHTHRALFVG 870



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 207/420 (49%), Gaps = 17/420 (4%)

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           S  + PD  T + ++    +  +   A  L D +   G+  +   +   I+ YC+   +D
Sbjct: 155 SAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLD 214

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
            A  +V  M++ G     V YN LI   CK   + EA  + + M  +G+  + +T  T++
Sbjct: 215 GAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLV 274

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           +  C  ++LD A  +    ++ G+   E +   ++ G  +  +   A +L  ++ E +++
Sbjct: 275 YGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMV 334

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+ F YNA++  + ++G   +A  ++NE+   G+ P+E T+  +IH  C  G ++ AL  
Sbjct: 335 PNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCM 394

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            ++M EK  +  +   N L++  C++  L+ A+ F    +  G   ++ +Y+ +I+ LC+
Sbjct: 395 LDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCR 454

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           +  L  A  L  +M EK +  + YT+ A+     ++ +++EA +  + M E+        
Sbjct: 455 KGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTES-------- 506

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     ++P+ ++++  I  +C  G  + A Q++++   +G+  +  TY +L++GL
Sbjct: 507 ---------NLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGL 557



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 17/353 (4%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD  T + ++ +  K      A  + D M   G+ ++       +   C  + LD A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L+      G  +  V Y  LI G  ++++   A+ + + M  R +     T   +++G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             ++ + + A++M  ++ + G +P E   + ++ G   +G+VE+A +   ++ E    P+
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I   N LL+ +C+ G+  +A +       KG   + VTY  LI SLCK   ++DA  +L 
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M EK +    Y Y ++     +   L+ A  F S MVE G                 + 
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIG-----------------LT 439

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P++ SYS  I   C +G    A+++  +  +KG+A N  T+  L+NG  K +K
Sbjct: 440 PNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKK 492



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 36/336 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PDN TY +++  L      ++ ++ ++D++    V N+ +   L+ G+C+ G L EA
Sbjct: 542 GLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEA 601

Query: 65  MRV----------VDL-------------------------MTQNKSLPDVWTYNMLING 89
             V          +DL                         M +    PD   +  +IN 
Sbjct: 602 YHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINM 661

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +   G + +A     EM +   LP+ VTY  L+N   +S     A  L  E+      PN
Sbjct: 662 YSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPN 721

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           + T N  + ++  EG ++ A  +   M + GF  + V+ NTLI   CK G ++EA  ++ 
Sbjct: 722 SYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLIS 780

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                G   + I+ +T++H LC +  ++EA  L N    +G   D V+Y  LI       
Sbjct: 781 RSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHG 840

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
           ++++ L ++ +M ++ + P+  T+ A+  G S   K
Sbjct: 841 ESDKCLGIYIDMVKKGVQPNWHTHRALFVGTSLMSK 876


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 221/450 (49%), Gaps = 2/450 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GCLP++VT+N ++  L +KG L E  +++  M+      +  TYN L++G    G++K
Sbjct: 267 GSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA-SSFTYNPLITGLLAKGFVK 325

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A  +   M     +P V TYN +I+G   +G +E A     EM ++ L PDV+TYN+L+
Sbjct: 326 KADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLL 385

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N + ++G   EA  L  +L   G+ P  +T+NI+I  YC+ G +++A ++   M E G  
Sbjct: 386 NGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCL 445

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  TY  L+  +  A ++  A    D M  KGL+ +    NT +        + +A+ L
Sbjct: 446 PDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRL 505

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                  G   D V+Y  LI G  +    N A  L  +M    + P   TY  +I    +
Sbjct: 506 REVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCE 565

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G   +A     +++  G+ P   T+   IH +C  G +  A  +  KM+E+  +P+ +T
Sbjct: 566 RGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 625

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N+L+  LCR G  + A + F   + +G   +  TY  LI   CKE   EDA     EM 
Sbjct: 626 YNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMH 685

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           +  + PD  T+ A+     E G +  A ++
Sbjct: 686 QNGIHPDYLTHKALFKGFDE-GHMNHAIEY 714



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 246/535 (45%), Gaps = 32/535 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD    N +L  L    + +++  + ++M + G+ P+  TYN L+  + K G 
Sbjct: 193 MASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGR 252

Query: 61  -LKEAMRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEA------FRLRKEMESLKLL 112
             K AM + ++ T+    LP+  T+N++I G    G LEEA       RL K+  S    
Sbjct: 253 NDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF--- 309

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
               TYN LI      G   +A  L  E++  GI P  VT+N MI    + G+++ A   
Sbjct: 310 ----TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              M   G  PD +TYN+L++  CKAG+++EA  +   +   GL    +T N ++   C 
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
              L+EA  L     ++G   D  +Y  L+ G         A + +DEM  + + P  F 
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFA 485

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN  I      G   +A  +   ++  G+  D  T+N +I G C  G +  A     KMV
Sbjct: 486 YNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMV 545

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
               +PD +T   L+   C  G+L +A KFF+  I  G A  +VTY   I + C+   L 
Sbjct: 546 HNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLY 605

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
            A+G   +M E+ + P+  TY  +  AL  +GR + A +    M+E G +          
Sbjct: 606 SAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLV---------- 655

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                  P+  +Y+  I+ +C +G ++DA++ + E  Q GI  +  T+  L  G 
Sbjct: 656 -------PNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 199/388 (51%), Gaps = 1/388 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VTYN ++  L + G++   +    +M+  GL P+  TYN L++GYCK G 
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA+ +   +      P V TYN+LI+G+C  G LEEA RL++EM     LPDV TY  
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     +     A +  DE+   G++P+   +N  I+     G I KA ++   M   G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D VTYN LID  CK GN+ +A  +   M   GL+ + IT   ++H  C    L EA 
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G     V+Y   I  Y R      A   + +M E  + P+  TYN +I  L
Sbjct: 574 KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+T+ A    +E+L+ G++P++ T+  +I G C EG  E A++F+ +M +    PD 
Sbjct: 634 CRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDY 693

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL 388
           +T   L  G   EG +  A+++  + +L
Sbjct: 694 LTHKALFKGF-DEGHMNHAIEYLENAVL 720



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 128/265 (48%), Gaps = 22/265 (8%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D  +   L  + EM    + P     N ++  LS + + +    +  E+LQ G+ P   T
Sbjct: 180 DTCSTLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVT 239

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFK--PDIVTCNILLSGLCREGILEKALKFFRS 385
           +NT++  F  EG+ +K      +M  +     P+ VT N++++GL R+G LE+A +    
Sbjct: 240 YNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEG 299

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
             L  KA  S TYN LI+ L  +  ++ A  L  EME + + P   TY A+   L++SG+
Sbjct: 300 MRLSKKA-SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQ 358

Query: 446 LEEAQ-KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +E AQ KF    VE   +  Q              P  I+Y+  +N +C  G  K+AL +
Sbjct: 359 VEAAQVKF----VEMRAMGLQ--------------PDVITYNSLLNGYCKAGSLKEALLL 400

Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
           F + R  G+A    TY  L++G  +
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCR 425


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 255/538 (47%), Gaps = 22/538 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN  L +L +      +  L S + ++GL+P+  TYN ++  YCK G L  A R   L+ 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           ++    D +T N L+ G+C  G L +A  L   M  +    +  +Y  LI    E+    
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L+  + + G  PN  T+ ++I+  CKEG+I  A  ++  M   G  P   TYN +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  CK+G +++A  +  +M   G   +  T N+++H LC  K  DEA  LLN A  RG+ 
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFS 389

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
              +++  +I GY + EK + AL++   M   +       Y  +I  L +  + ++A D 
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE+  +G+ P+   + +II  +C  G+V  AL+       +  +P+  T + L+ GL +
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQ 509

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +  L KA+         G     +TY TLI   CK+   ++AF L   ME+  L PD   
Sbjct: 510 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 569

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTP------------- 475
           Y  +  AL +SGR EEA  F   +V+ G    K+ +  +    SK               
Sbjct: 570 YNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMV 626

Query: 476 -EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            E     S +YS  +   C Q +  +AL I ++   +G+  N   Y  +++ +IK  K
Sbjct: 627 NEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGK 684



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 262/589 (44%), Gaps = 73/589 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  TY  ++  L K+G++++ R LL +M ++G+VP+  TYN ++ GYCK G LK+A
Sbjct: 283 GCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDA 342

Query: 65  MRVVDLMTQNKSLPDVWTYNMLI----------------------------------NGW 90
           + +  LM  N   PD WTYN LI                                  NG+
Sbjct: 343 LGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGY 402

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C A  +++A R++  M S K   D+  Y  LI+   +  R  EA   ++E+  +G+ PN 
Sbjct: 403 CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNV 462

Query: 151 VTHNIMIKWYCKEGKI-----------------------------------DKACKIVRN 175
           V +  +I  YCK GK+                                    KA  ++  
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 522

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M+E+G +P  +TY TLI   CK    + AFR+ ++M + GL  +    N +   LC   +
Sbjct: 523 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 582

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
            +EAY  L    K+G  L +V+Y +L+ G+ +      A  L ++M        + TY+ 
Sbjct: 583 AEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSV 639

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++  L +  K  +A+ +L+++   G+  +   +  II     EG+ + A    N+M+   
Sbjct: 640 LLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 699

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            KP  +T  + +S  C+ G +E+A          G A D VTYN  I+       ++ AF
Sbjct: 700 HKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAF 759

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
             L  M +    P+ +TY  +    ++          TS M    K++  V Q       
Sbjct: 760 STLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLD-TVWQLLERMVK 818

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
             ++P++++YS  I   C   R ++A  + +    K I+ N+  Y  L+
Sbjct: 819 HGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 867



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 255/540 (47%), Gaps = 36/540 (6%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D   Y  ++  L KK +L E +D L+++   GL PN   Y  ++  YCK+G +  A+
Sbjct: 423 CKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAAL 482

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V  L       P+ WTY+ LI G      L +A  L  +M+   + P V+TY TLI   
Sbjct: 483 EVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 542

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +      AF+L + ++++G+ P+   +N++    CK G+ ++A      + + G     
Sbjct: 543 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTK 599

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTY +L+D   KAGN E A  +++ M  +G K ++ T + +L  LC +KKL+EA  +L+ 
Sbjct: 600 VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQ 659

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            + RG   + V+Y  +I+   ++ K + A  +++EM      PS  TY   I    + G+
Sbjct: 660 MTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGR 719

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A  ++ E+ ++G+ PD  T+N  I+G    G ++ A     +M++ S +P+  T  +
Sbjct: 720 IEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWL 779

Query: 366 LL----------------SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           LL                SG+     L+   +     +  G    +VTY+++I+  CK  
Sbjct: 780 LLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 839

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           RLE+A  LL  M  K + P+   Y  +     +    E+A  F + M+E G       QP
Sbjct: 840 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECG------FQP 893

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +             SY   I   C +G Y  A  +F +  +     N+  +  L +GL+K
Sbjct: 894 HLE-----------SYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLK 942



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 216/467 (46%), Gaps = 23/467 (4%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G  PD   YN + DAL K G+  E    L    K+G+V  + TY  LV G+ K G 
Sbjct: 558  MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAGN 614

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             + A  +++ M       D  TY++L+   C    L EA  +  +M    +  ++V Y  
Sbjct: 615  TEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI 674

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +I+   + G+   A  + +E+   G KP+A+T+ + I  YCK G+I++A  ++  ME NG
Sbjct: 675  IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             +PD VTYN  I+     G M+ AF  +  M     + N  T   +L             
Sbjct: 735  VAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHF---------- 784

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              L  +    +Y+D        +G +   K +   +L + M +  + P+  TY+++I G 
Sbjct: 785  --LKMSLANAHYVDT-------SGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGF 835

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             ++ + E+A  +L+ +L   + P+E  +  +I   C     EKA  F   M+E  F+P +
Sbjct: 836  CKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHL 895

Query: 361  VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             + + L++GLC EG  +KA   F   +      + V +  L   L K   ++    LLS 
Sbjct: 896  ESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSA 955

Query: 421  MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            ME +    D  TY+ +   + E+  + E+    + +V   ++ H ++
Sbjct: 956  MENRHCRIDSETYSMVTNNIHEASGMYESY-MCAPLVGQNRMQHALL 1001



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 211/503 (41%), Gaps = 54/503 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V Y +I+DA  K GK+    ++    + +G  PN  TY+ L+ G  +   L +A
Sbjct: 457 GLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKA 516

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M ++   P V TY  LI G C     + AFRL + ME   L PD   YN L + 
Sbjct: 517 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 576

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SGR+ EA+     L + G+    VT+  ++  + K G  + A  ++  M   G   D
Sbjct: 577 LCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKAD 633

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+ L+ A CK   + EA  ++D M  +G+K N +    I+  +  E K D A  + N
Sbjct: 634 SHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFN 693

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+    ++Y   I+ Y +  +   A  L  EM+   + P   TYN  I G    G
Sbjct: 694 EMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMG 753

Query: 305 ---------------------------------------------------KTEQAIDML 313
                                                              K +    +L
Sbjct: 754 YMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLL 813

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             +++ G+ P   T+++II GFC   ++E+A    + M+ K   P+     +L+   C  
Sbjct: 814 ERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDI 873

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
            + EKA  F  + I  G      +Y+ LI+ LC E   + A  L  ++ E     +   +
Sbjct: 874 KLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAW 933

Query: 434 AAIHTALVESGRLEEAQKFTSIM 456
             ++  L+++G ++   +  S M
Sbjct: 934 KILNDGLLKAGHVDICSQLLSAM 956



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 171/398 (42%), Gaps = 55/398 (13%)

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKG---LKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           ++I  +  A +M EA   +  + R G   L ++    N  L +L      +    L +  
Sbjct: 115 SMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQL 174

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   D V+Y T+I  Y ++     A + +  ++E  +   T+T NA++ G  ++G  
Sbjct: 175 VQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDL 234

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L  +   G   +E ++  +I G C    V +AL     M++    P++ T  +L
Sbjct: 235 RKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLL 294

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLC+EG +  A         +G      TYN +I   CK  RL+DA G+ + ME    
Sbjct: 295 IRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGC 354

Query: 427 GPDRYTYAAIHTAL----------------------------------VESGRLEEAQKF 452
            PD +TY ++   L                                   ++ ++++A + 
Sbjct: 355 NPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRV 414

Query: 453 TSIMVET---------GKINHQVVQPNTSKTPEE---------IDPSSISYSEKINEHCS 494
            SIM+ +         G +   +++ +  K  ++         + P+ + Y+  I+ +C 
Sbjct: 415 KSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCK 474

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            G+   AL++F+ T  +G   N  TY +L+ GLI+ +K
Sbjct: 475 VGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQK 512



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 93/205 (45%)

Query: 25   KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
            KL+ V  LL  M K GL P   TY+ +++G+CK   L+EA  ++D M      P+   Y 
Sbjct: 805  KLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 864

Query: 85   MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            MLI   C+  + E+A      M      P + +Y+ LI    + G   +A  L  +L E 
Sbjct: 865  MLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEM 924

Query: 145  GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
                N V   I+     K G +D   +++  ME      D  TY+ + +   +A  M E+
Sbjct: 925  DYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYES 984

Query: 205  FRMMDVMGRKGLKMNTITLNTILHT 229
            +    ++G+  ++   + L  + ++
Sbjct: 985  YMCAPLVGQNRMQHALLGLAHLTYS 1009


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 226/436 (51%), Gaps = 5/436 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+P+ V YNT++D   KKG++     L   +K +G +P   T+  LV+G+CK+G   
Sbjct: 236 GKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMF- 294

Query: 63  EAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           EA+ ++ L  +++ L  +V  YN +I+     G   +A    KEM      PD+VTYNTL
Sbjct: 295 EAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTL 354

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN F   G   EA KL+++    G+ PN +T+  ++  YCK+G+  KA   +  M  +G 
Sbjct: 355 INHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGL 414

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D ++Y  LI     AG ++ A  + D M  +G+  +    N +++ L  + KL  A +
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L     +    D   Y TL+ G+ R    + A KL+  + E+ + P    YN MI G S
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +SG  + AI  ++++ ++  +PD  TF+TII G+  +  +   L+    MV+++ KP++V
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T   L++G CR+G  + A K F      G     VTY+ LI S CKE +L  A      M
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELM 654

Query: 422 EEKKLGPDRYTYAAIH 437
              K  P+    AA H
Sbjct: 655 LINKCTPND---AAFH 667



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 251/532 (47%), Gaps = 23/532 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDM--KKQG---LVPNRTTYNILVSGYCKLGWL 61
           LP     N++L+ L K  ++     L  +M  +  G    V N TT +I+V G C  G +
Sbjct: 166 LPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTT-SIMVKGLCLKGRI 224

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           ++ +++++       +P++  YN LI+G+C  G +E A++L K+++    +P + T+ +L
Sbjct: 225 EDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSL 284

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +N F + G       L+ E+ + G+  N   +N +I    K G   KA   ++ M EN  
Sbjct: 285 VNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCC 344

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VTYNTLI+  C  G +EEA ++++   R+GL  N +T   ++H  C + +  +A  
Sbjct: 345 EPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATD 404

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            L   S  G  +D +SYG LI G     + + AL + D M  R I+P    YN ++ GL 
Sbjct: 405 YLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLF 464

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + GK   A  ML E+L   + PD   + T++ GF   G +++A +    ++EK   P +V
Sbjct: 465 KKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N+++ G  + G+++ A+             D  T++T+I    K+  +     +   M
Sbjct: 525 GYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLM 584

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++   P+  TY ++       G  + A+K  S+M   G                 + PS
Sbjct: 585 VKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG-----------------LKPS 627

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            ++YS  I   C + +   A+  FE         N + +  L+NG    + +
Sbjct: 628 VVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKAT 679



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 201/417 (48%), Gaps = 14/417 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD VTYNT+++    +G++ E   LL    ++GL PN+ TY  LV GYCK G   +A 
Sbjct: 344 CEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKAT 403

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             +  M+ +    D+ +Y  LI+G   AG ++ A  +R  M +  +LPD   YN L+N  
Sbjct: 404 DYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGL 463

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F+ G+   A  ++ E+ +  I P+A  +  ++  + + G +D+A K+ + + E G  P  
Sbjct: 464 FKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGV 523

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V YN +I    K+G M+ A   +D M R     +  T +TI+     +  ++    +   
Sbjct: 524 VGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGL 583

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K+    + V+Y +LI GY R  +   A KL+  M+   + PS  TY+ +I    +  K
Sbjct: 584 MVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAK 643

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ--------------FHNKM 351
             +A+     +L +   P++  F+ +++GF +      + +              F ++M
Sbjct: 644 LGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRM 703

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           +   +       N +L  LC++ +++ AL+     +  G   D+V++  LI  +C E
Sbjct: 704 IGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLE 760



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 219/464 (47%), Gaps = 14/464 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN I+DA +K G   + +D L +M +    P+  TYN L++ +C  G ++EA ++++   
Sbjct: 316 YNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTI 375

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +    P+  TY  L++G+C  G   +A     EM +  L  D+++Y  LI+    +G   
Sbjct: 376 RRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVD 435

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
            A  + D +   GI P+A  +N+++    K+GK+  A  ++  M +   +PD   Y TL+
Sbjct: 436 TALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLV 495

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   + GN++EA ++  ++  KGL    +  N ++        +D A + ++   +  + 
Sbjct: 496 DGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHV 555

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  ++ T+I GY +    N  LK++  M ++   P+  TY ++I G  + G+T+ A  +
Sbjct: 556 PDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKL 615

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC- 371
            + +   G+ P   T++ +I  FC E ++ KA+ +   M+     P+    + L++G   
Sbjct: 616 FSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTN 675

Query: 372 -------------REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                         E        FF   I  G    +  YN ++  LC++R ++ A  L 
Sbjct: 676 TKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLR 735

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           ++M    L  D  ++ A+   +   G  +E +   S  +  G++
Sbjct: 736 NKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGEL 779



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 16/199 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VTY+ ++ +  K+ KL +       M      PN   ++ LV+G+     
Sbjct: 619 MRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKA 678

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGW--------------CNAGMLEEAFRLRKEM 106
              +    +L   ++S+ + +   M+ +GW              C   M++ A +LR +M
Sbjct: 679 TAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKM 738

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLID-ELDEHGIKPNAVTHNIMIKWYCKEGK 165
            +  L  D V++  LI+     G S E   +I  +L+E  ++  A+ +++ +  +  EG 
Sbjct: 739 LAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQI-ALKYSLELDKFIPEGG 797

Query: 166 IDKACKIVRNMEENGFSPD 184
           I +A  I++ M +   SP+
Sbjct: 798 ISEASGILQAMIKGYVSPN 816


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 214/407 (52%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +GF    + V Y+ ++D L + G ++E  +  ++M   G+ PN  TY  L+ G C +G  
Sbjct: 177 DGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKF 236

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            E   +VD M +      V+ + +LI+G C  GML EA  +  EM +    P++VT   L
Sbjct: 237 LEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTAL 296

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +  +   G    A +L D + E G K +  T+N+ I  YCK G++  A ++   M   G 
Sbjct: 297 MGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGV 356

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTYN+LID  CKAG +  A+ ++  M R GL  + +T   +L  LC  K+LD+A +
Sbjct: 357 VPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAIL 416

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L N   + G   D  SY  LI G     +   A+ L  +M  + ++P   TY+ +I GL 
Sbjct: 417 LFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLC 476

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +SG+   A  +LNE+   G +PD  T++ ++     +  +++A+   N+M+++  +PD++
Sbjct: 477 RSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVM 536

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
              I++ G C+   +++A+  FR   +K    D VTY  L +++ K 
Sbjct: 537 CYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKS 583



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 234/456 (51%), Gaps = 8/456 (1%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVP--------NRTTYNILVSGYCKLGW 60
           + V+Y  +++ L + G++NE  +LL  ++K+            N   Y+I++   C+ G+
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + E     + M  N   P+ +TY  LI G C  G   E F L  EM    L   V  +  
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++G  +EA ++ DE+   G +PN VT   ++  YC +G +D A ++   + E G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F  D  TYN  I   CK G + +A R+ D M R+G+  N +T N+++  LC   ++  A+
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++ +  + G   D V+   L+ G  + ++ ++A+ L++++ E  + P  ++Y  +I G 
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             S +  +A+++L ++    ++P   T++ +I G C  G++  A +  N+M  K   PD 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T +ILL  L ++  L++A+  F   I +G   D + Y  +I   CK  R+++A  L  E
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFRE 560

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           M  K L PD  TY  +  A+ +SG      KF +++
Sbjct: 561 MHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVI 596



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 245/519 (47%), Gaps = 25/519 (4%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP 78
             F  G ++    +   + K+G   +    N ++ G C  G + +A+   D +  N    
Sbjct: 81  CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEM--------ESLKLLPDVVTYNTLINRFFESGR 130
           +  +Y +LING C  G + EA  L + +        +   +  +VV Y+ +I+    +G 
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             E F+  +E+  +G+ PN  T+  +I+  C  GK  +   +V  M   G       +  
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  CK G + EA  M D M  +G + N +T   ++   C +  +D A  L ++  + G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           +  D  +Y   I GY +  +   A++++DEM    ++P+  TYN++I  L ++G+   A 
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           +++  + +SG+ PD  T   ++ G C   ++++A+   N++VE    PD+ +  IL+ G 
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C    + +A+   R   LK      VTY+ LI  LC+  R+ +A+ LL+EM  K   PD 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ +  AL +   L+EA    + M++ G                 ++P  + Y+  I+
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRG-----------------LEPDVMCYTIMID 543

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +C   R  +A+ +F E   K +  +  TY  L N + K
Sbjct: 544 GYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 582



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 194/374 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+  TY +++  L   GK  E   L+ +M ++GL  +   + +L+ G CK G 
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  + D M      P++ T   L+ G+C  G ++ A  L   +       DV TYN 
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I+ + + GR  +A ++ DE+   G+ PN VT+N +I   CK G++  A +IV+ M  +G
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VT   L+D  CK+  +++A  + + +   GL  +  +   ++H  C  +++ EA 
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAM 450

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +      V+Y  LI G  R  + + A +L +EM  +  +P T TY+ ++  L
Sbjct: 451 NLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDAL 510

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +    ++A+ + N++++ G+ PD   +  +I G+C   ++++A+    +M  K+  PDI
Sbjct: 511 WKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDI 570

Query: 361 VTCNILLSGLCREG 374
           VT  IL + + + G
Sbjct: 571 VTYTILFNAVFKSG 584



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 166/307 (54%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT   ++     KG ++  R+L   + + G   +  TYN+ + GYCK+G +++A+RV
Sbjct: 288 PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRV 347

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M +   +P++ TYN LI+  C AG +  A+ + K M    L PD+VT   L++   +
Sbjct: 348 FDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCK 407

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           S R  +A  L ++L E G+ P+  ++ I+I   C   ++ +A  ++R+M      P  VT
Sbjct: 408 SKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVT 467

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LID  C++G +  A+R+++ M  KG   +TIT + +L  L  ++ LDEA  L N   
Sbjct: 468 YSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMI 527

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KRG   D + Y  +I GY + E+ + A+ L+ EM  + ++P   TY  +   + +SG   
Sbjct: 528 KRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNS 587

Query: 308 QAIDMLN 314
                +N
Sbjct: 588 YEWKFVN 594



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 203/426 (47%), Gaps = 25/426 (5%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D V  NT++     +G  ++A +  DE+  +G   N V++ I+I   C+ G++++A  ++
Sbjct: 106 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165

Query: 174 RNMEE------NGF--SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           R +E+      +GF    + V Y+ +ID  C+ G ++E F   + M   G+  N  T  +
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++  LC   K  E + L++   +RG  +    +  LI G  ++     A +++DEM  R 
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P+  T  A++ G    G  + A ++ + + + G   D  T+N  IHG+C  G+V  A+
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  ++M  +   P+IVT N L+  LC+ G +  A +  ++    G   D VT   L+  L
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK +RL+ A  L +++ E  L PD ++Y  +      S R+ EA      M         
Sbjct: 406 CKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDM--------- 456

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                     + + P  ++YS  I+  C  GR  +A ++  E   KG   +  TY  L++
Sbjct: 457 --------HLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLD 508

Query: 526 GLIKRR 531
            L K++
Sbjct: 509 ALWKKQ 514



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 197/421 (46%), Gaps = 26/421 (6%)

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF  G    +F +  ++ + G   + V  N ++K  C  G + KA +    +  NGFS +
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--------LKMNTITLNTILHTLCCEKKL 236
            V+Y  LI+  C+ G + EA  ++ ++ ++         +K N +  + ++  LC    +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DE +   N     G   +E +YG+LI G     K      L DEM  R +  S + +  +
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I GL ++G   +A +M +E++  G  P+  T   ++ G+C +G V+ A +  + + E  F
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           K D+ T N+ + G C+ G +  A++ F     +G   + VTYN+LI  LCK   +  A+ 
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           ++  M    L PD  T   +   L +S RL++A    + +VE+G                
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG---------------- 425

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
            + P   SY+  I+  C+  R  +A+ +  +   K +  +  TY  L++GL  R   IS 
Sbjct: 426 -LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLC-RSGRISN 483

Query: 537 A 537
           A
Sbjct: 484 A 484



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 144/289 (49%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TYN  +    K G++ +   +  +M ++G+VPN  TYN L+   CK G +  A  +V
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIV 383

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M ++   PD+ T  +L++G C +  L++A  L  ++    L PDV +Y  LI+    S
Sbjct: 384 KTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS 443

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  EA  L+ ++    + P+ VT++ +I   C+ G+I  A +++  M   G  PD +TY
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITY 503

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           + L+DA  K  +++EA  + + M ++GL+ + +    ++   C  +++DEA  L      
Sbjct: 504 SILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHM 563

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +    D V+Y  L    F+    +   K  + +++    P    Y A +
Sbjct: 564 KNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLAAL 612



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 115/211 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT   +LD L K  +L++   L + + + GL P+  +Y IL+ G C    
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM ++  M     +P + TY+ LI+G C +G +  A+RL  EM     LPD +TY+ 
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  ++     EA  L +++ + G++P+ + + IMI  YCK  +ID+A  + R M    
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             PD VTY  L +A  K+G+    ++ ++V+
Sbjct: 566 LVPDIVTYTILFNAVFKSGSNSYEWKFVNVI 596


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 275/591 (46%), Gaps = 68/591 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G LPD VT+  ++DAL K GK++E    L  MKKQG+ PN  TYN L+ G  +L  
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNR 417

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ + + M         +TY + I+ +  +G   +A +  ++M++  ++P++V  N 
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNA 477

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +    E GR  EA +  + L + G+ P+A+T+NI+++ Y K G++D A K++  MEENG
Sbjct: 478 SLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG 537

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V  N+LID   KA  ++EA++M   M    L    +T NT+L  L  E ++ EA 
Sbjct: 538 CDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEAT 597

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L           + +S+ TL+    ++ + + ALK+   M E    P   TYN +I+GL
Sbjct: 598 ALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGL 657

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-------E 353
            +  +   A  + +++ +  + PD  T  T++ G   +G++E A +   + V       +
Sbjct: 658 IKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHAD 716

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL-------------------KGKAVD 394
            SF  D      L+ G+  E  + +++ F  S +                     GKAVD
Sbjct: 717 GSFWED------LMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVD 770

Query: 395 SV-----------------TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +                   YN+LI  L K R  E A+GL  +M+     PD +TY    
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFL 830

Query: 438 TALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTPE--------------EID 479
            AL +SG+++E       M+  G     I H +V     K+                +  
Sbjct: 831 DALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFS 890

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           P+  +Y   I+     GR ++A Q FEE    G   N   Y  LMNG  K+
Sbjct: 891 PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 252/521 (48%), Gaps = 17/521 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY TI   L+ +G L E    L  M+K G V N  +Y  L+    K G+ +EA++V   M
Sbjct: 159 TYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRM 218

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + TY+ L+        +E    L +EMESL L P++ T+   I     +G+ 
Sbjct: 219 VSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKI 278

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA+ ++  +D+ G  P+ VT+ ++I   C  GK++ A ++   M+ +   PD VTY TL
Sbjct: 279 DEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITL 338

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D     G+++        M   G   + +T   ++  LC   K+DEA+  L+   K+G 
Sbjct: 339 LDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGV 398

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y TLI G  R  + + AL+L++ M+   +  + +TY   I    +SG++ +AI 
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
              ++  +G++P+    N  ++    +G++E+A +F N + +    PD +T NIL+    
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G ++ A+K        G   + V  N+LI +L K  R+++A+ +   M+E KL P   
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   L + GR++EA      M+                  ++  P++IS++  ++ 
Sbjct: 579 TYNTLLAGLGKEGRVQEATALFKGMIA-----------------DDCPPNTISFNTLLDC 621

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C  G    AL++     +     +  TY  ++ GLIK  +
Sbjct: 622 LCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENR 662



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 261/532 (49%), Gaps = 24/532 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + +  +Y  ++  L K G   E   +   M  +G+ P+  TY+ L+     LG 
Sbjct: 183 MRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVA---LGK 239

Query: 61  LKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            ++   V+ L+ + +SL   P+++T+ + I     AG ++EA+ + K M+     PDVVT
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVT 299

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  LI+    +G+   A +L  ++     KP+ VT+  ++  +   G +D   +    ME
Sbjct: 300 YTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEME 359

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
            +G+ PD VT+  LIDA CK G ++EAF  +DVM ++G+  N  T NT++  L    +LD
Sbjct: 360 ADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLD 419

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  L NS    G      +Y   I  Y +  ++ +A+K +++MK   I+P+    NA +
Sbjct: 420 EALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASL 479

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           + L++ G+ E+A +  N L + G+ PD  T+N ++  +   G+V+ A++  ++M E    
Sbjct: 480 YSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCD 539

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P++V  N L+  L +   +++A K F+       A   VTYNTL++ L KE R+++A  L
Sbjct: 540 PEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATAL 599

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
              M      P+  ++  +   L ++G ++ A K    M E                   
Sbjct: 600 FKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF--------------- 644

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             P  ++Y+  I     + R   A  +F + + K I  +  T   L+ G+IK
Sbjct: 645 --PDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIK 693



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 264/591 (44%), Gaps = 88/591 (14%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G +P+ V  N  L +L ++G+L E ++  + +KK GL P+  TYNIL+  Y K G + +A
Sbjct: 467  GIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDA 526

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++  M +N   P+V   N LI+    A  ++EA+++ + M+ +KL P VVTYNTL+  
Sbjct: 527  IKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAG 586

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + GR  EA  L   +      PN ++ N ++   CK G++D A K++  M E    PD
Sbjct: 587  LGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPD 646

Query: 185  CVTYNT----------------------------------LIDANCKAGNMEEAFRMM-- 208
             +TYNT                                  L+    K G +E+AFR+   
Sbjct: 647  VLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKE 706

Query: 209  ---------------DVMG--------------RKGLKMNTI-----TLNTILHTLCCEK 234
                           D+MG               + L  NTI      L  ++  LC   
Sbjct: 707  FVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHG 766

Query: 235  KLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K  +AY +    +K       + +Y +LI G  +      A  L+ +MK     P  FTY
Sbjct: 767  KAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTY 826

Query: 294  NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            N  +  L +SGK ++  D+  E+L  G  P+  T N +I G      ++KA+  +  ++ 
Sbjct: 827  NLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMS 886

Query: 354  KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              F P   T   L+ GL + G LE+A +FF   +  G   +   YN L++   K+  +E 
Sbjct: 887  GDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVET 946

Query: 414  AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
            A  L   M ++ + PD  +Y+ +   L   G++++A  +   +  +G             
Sbjct: 947  ACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG------------- 993

Query: 474  TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                +DP  + Y+  IN      R ++AL +F+E R +GI  +  TY  L+
Sbjct: 994  ----LDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALI 1040



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 251/589 (42%), Gaps = 123/589 (20%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  VTYNT+L  L K+G++ E   L   M      PN  ++N L+   CK G +  A+++
Sbjct: 575  PTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKM 634

Query: 68   VDLMTQNKSLPDVWTYNMLING-----------W----------------CNA------- 93
            +  MT+    PDV TYN +I G           W                C         
Sbjct: 635  LFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKD 694

Query: 94   GMLEEAFRLRKEM-------------ESLK-------------LLPDVVTYNT------- 120
            G +E+AFR+ KE              E L              L  + +  NT       
Sbjct: 695  GRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSV 754

Query: 121  ---LINRFFESGRSMEAFKLIDELDE-HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
               L+    + G++++A+ +  +L +   I P+   +N +I    K    + A  +   M
Sbjct: 755  LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM 814

Query: 177  EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
            +  G +PD  TYN  +DA  K+G ++E F + + M  +G K NTIT N ++  L     L
Sbjct: 815  KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSL 874

Query: 237  DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
            D+A  L               Y  L++G F                     P+ +TY  +
Sbjct: 875  DKAIDL---------------YYDLMSGDFS--------------------PTPWTYGPL 899

Query: 297  IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            I GL + G+ E+A     E+L  G +P+   +N +++GF  +G VE A +   +MV++  
Sbjct: 900  IDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGI 959

Query: 357  KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            +PD+ + +I++  LC  G ++ AL +F    L G   D V YN +I+ L + +R+E+A  
Sbjct: 960  RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALS 1019

Query: 417  LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
            L  EM  + + PD YTY A+   L  +G +EEA K    +   G                
Sbjct: 1020 LFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG---------------- 1063

Query: 477  EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             ++P+  +Y+  I  H   G    A  ++++    G   N  T+  L N
Sbjct: 1064 -LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/563 (24%), Positives = 252/563 (44%), Gaps = 55/563 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  GC P+ V  N+++D L+K  +++E   +   MK+  L P   TYN L++G  K G 
Sbjct: 533  MEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGR 592

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++EA  +   M  +   P+  ++N L++  C  G ++ A ++   M  +   PDV+TYNT
Sbjct: 593  VQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNT 652

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI-------V 173
            +I    +  R   AF L  ++ +  I P+ VT   ++    K+G+I+ A ++       V
Sbjct: 653  VIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHV 711

Query: 174  RNMEENGFSPD-------------------CVTYNTLIDAN----------CKAGNMEEA 204
             +  +  F  D                    +  NT+ + +          CK G   +A
Sbjct: 712  GDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDA 771

Query: 205  FRMMDVMGRKGLKMNTI-TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
            + +   + +      ++   N+++  L   +  + A+ L       G   D  +Y   + 
Sbjct: 772  YNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLD 831

Query: 264  GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
               +  K      L++EM  R   P+T T+N +I+GL +S   ++AID+  +L+     P
Sbjct: 832  ALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSP 891

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
               T+  +I G    G++E+A QF  +M++    P+    NIL++G  ++G +E A + F
Sbjct: 892  TPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELF 951

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            R  + +G   D  +Y+ ++  LC   +++DA     E++   L PD   Y  +   L  S
Sbjct: 952  RRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRS 1011

Query: 444  GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
             R+EEA      M   G                 I P   +Y+  I      G  ++A +
Sbjct: 1012 QRVEEALSLFDEMRNRG-----------------ITPDLYTYNALILNLGIAGMVEEAGK 1054

Query: 504  IFEETRQKGIAINKSTYMNLMNG 526
            ++EE + KG+  N  TY  L+ G
Sbjct: 1055 MYEELQLKGLEPNVFTYNALIRG 1077



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 161/325 (49%)

Query: 4    FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            F   P    YN+++D L K         L   MK  G  P+  TYN+ +    K G +KE
Sbjct: 782  FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841

Query: 64   AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
               + + M      P+  T+N++I G   +  L++A  L  ++ S    P   TY  LI+
Sbjct: 842  LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 124  RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + GR  EA +  +E+ ++G  PN   +NI++  + K+G ++ AC++ R M + G  P
Sbjct: 902  GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961

Query: 184  DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            D  +Y+ ++D  C  G +++A    + +   GL  + +  N +++ L   ++++EA  L 
Sbjct: 962  DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021

Query: 244  NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            +    RG   D  +Y  LI           A K+++E++ + + P+ FTYNA+I G S S
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081

Query: 304  GKTEQAIDMLNELLQSGMIPDETTF 328
            G  ++A  +  +++  G  P+  TF
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 2/294 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  GC PD  TYN  LDAL K GK+ E+ DL  +M  +G  PN  T+NI++ G  K   
Sbjct: 814  MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 61   LKEAMRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            L +A+ +  DLM+ + S P  WTY  LI+G    G LEEA +  +EM     +P+   YN
Sbjct: 874  LDKAIDLYYDLMSGDFS-PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN 932

Query: 120  TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
             L+N F + G    A +L   + + GI+P+  +++IM+   C  GK+D A      ++ +
Sbjct: 933  ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992

Query: 180  GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            G  PD V YN +I+   ++  +EEA  + D M  +G+  +  T N ++  L     ++EA
Sbjct: 993  GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
              +      +G   +  +Y  LI G+      +RA  ++ +M      P+T T+
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 210/470 (44%), Gaps = 19/470 (4%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++ + V +LM +      + TY  +       G L EA    ++M  +  + +  +Y  
Sbjct: 138 VEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIG 197

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +SG   EA K+   +   GIKP+  T++ ++    K   I+    +++ ME  G
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  T+   I    +AG ++EA+ ++  M   G   + +T   ++  LC   KL+ A 
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAK 317

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK-LWDEMKERQIMPSTFTYNAMIWG 299
            L        +  D V+Y TL+   F D     A+K  W EM+    +P   T+  +I  
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDK-FSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + GK ++A   L+ + + G+ P+  T+NT+I G     ++++AL+  N M     +  
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T  + +    + G   KA+K F      G   + V  N  + SL ++ RLE+A    +
Sbjct: 437 AYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFN 496

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            +++  L PD  TY  +     ++GR+++A K  S M E G                  D
Sbjct: 497 GLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG-----------------CD 539

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           P  +  +  I+      R  +A ++F+  ++  +A    TY  L+ GL K
Sbjct: 540 PEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGK 589



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 103/191 (53%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +GC+P+   YN +++   K+G +    +L   M K+G+ P+  +Y+I+V   C +G 
Sbjct: 919  MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGK 978

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A+   + +  +   PD+  YN++ING   +  +EEA  L  EM +  + PD+ TYN 
Sbjct: 979  VDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNA 1038

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI     +G   EA K+ +EL   G++PN  T+N +I+ +   G  D+A  + + M   G
Sbjct: 1039 LILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGG 1098

Query: 181  FSPDCVTYNTL 191
              P+  T+  L
Sbjct: 1099 CRPNTGTFAQL 1109



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 63/120 (52%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD V YN +++ L +  ++ E   L  +M+ +G+ P+  TYN L+      G ++EA
Sbjct: 993  GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ + +      P+V+TYN LI G   +G  + A+ + K+M      P+  T+  L N+
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQ 1112



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 39/88 (44%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  PD  TYN ++  L   G + E   +  +++ +GL PN  TYN L+ G+   G 
Sbjct: 1024 MRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGN 1083

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
               A  V   M      P+  T+  L N
Sbjct: 1084 PDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 220/456 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+N TY  ++      GK  EV  +L +M   GL P+   Y +L+   CK G   EA
Sbjct: 232 GVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEA 291

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D + +    P V  Y +L++G+   G L E       M    + PD   +N + N 
Sbjct: 292 RNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNA 351

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +     EA  + D++ +  + P  V +  +I   CK G++D A      M   G +PD
Sbjct: 352 YAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPD 411

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              +++L+   C     E+A ++   +  +G+++N    N ++  LC E ++ EA  L++
Sbjct: 412 IFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLID 471

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +     D +SY TL+ G+    + + A KL D M    + P  FTYN ++ G  ++ 
Sbjct: 472 LMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKAR 531

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A  +  E+L  G+ P   T+NTI+HG    G+  +A + +  M+    K DI T  
Sbjct: 532 RIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYT 591

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+L+GLCR   +++A K F+S   K   +D  T N +I +L K  R EDA  L + +   
Sbjct: 592 IILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAY 651

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L PD  TY  I   L++ G LEE  +  S M E G
Sbjct: 652 GLVPDVETYRLIAENLIKEGSLEELDELFSAMEENG 687



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 222/454 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD V Y  +LD L K G+  E R++   + ++G+ P+ T Y IL+ GY   G 
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E    +DLM +N   PD   +N++ N +    M++EA  +  +M    L P VV Y  
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGA 382

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR  +A    +++   G+ P+    + ++   C   K +KA K+   + + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +   +N L+   C+ G + EA R++D+M R  ++ + I+ NT++   C   ++DEA 
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   DE +Y TL+ GY +  + + A  L+ EM  + + P   TYN ++ GL
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGL 562

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+  +A ++   ++ +    D  T+  I++G C    V++A +    +  K  + DI
Sbjct: 563 FQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDI 622

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NI++  L + G  E A+  F +    G   D  TY  +  +L KE  LE+   L S 
Sbjct: 623 FTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSA 682

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           MEE    P+     A+   L+  G +  A  + S
Sbjct: 683 MEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLS 716



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 245/582 (42%), Gaps = 93/582 (15%)

Query: 41  LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN-------------------------- 74
           + P+  TY IL+  +C++G LK       L+ +                           
Sbjct: 88  VAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEA 147

Query: 75  -----KSLPD------VWTYNMLINGWCNAGMLEEAFRLRKEME---SLKLLPDVVTYNT 120
                + +P+      V +YN+L+ G CN    EEA  L   M         P+VVTY T
Sbjct: 148 TDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTT 207

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++     A  +   + + G++PN  T+  +I  Y   GK  +  ++++ M  +G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PDCV Y  L+D  CK G   EA  + D + RKG+K +      +LH    E  L E +
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMH 327

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+   + G   D   +  +   Y +    + A+ ++D+M+++ + P    Y A+I  L
Sbjct: 328 SFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDAL 387

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS----------------------- 337
            + G+ + A+   N+++  G+ PD   F+++++G C+                       
Sbjct: 388 CKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNA 447

Query: 338 ------------EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
                       EG+V +A +  + M+    +PD+++ N L+ G C  G +++A K    
Sbjct: 448 AFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +  G   D  TYNTL+   CK RR++DA+ L  EM  K L P   TY  I   L + GR
Sbjct: 508 MVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGR 567

Query: 446 LEEAQK--------------FTSIMVETGKINHQVVQPN----TSKTPEEIDPSSISYSE 487
             EA++              +T  ++  G   +  V        S   +++     + + 
Sbjct: 568 FCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I      GR +DA+ +F      G+  +  TY  +   LIK
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIK 669



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 199/405 (49%), Gaps = 12/405 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+  +N + +A  KK  ++E   +   M++Q L P    Y  L+   CKLG + +A
Sbjct: 337 GVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDA 396

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   + M      PD++ ++ L+ G C     E+A +L  E+    +  +   +N L+  
Sbjct: 397 VLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCN 456

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR MEA +LID +    ++P+ +++N ++  +C  G+ID+A K++  M   G  PD
Sbjct: 457 LCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPD 516

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-----CCEKKLDEA 239
             TYNTL+   CKA  +++A+ +   M  KGL    +T NTILH L      CE K  E 
Sbjct: 517 EFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAK--EL 574

Query: 240 YM-LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           Y+ ++N+  K   Y    +Y  ++ G  R+   + A K++  +  + +    FT N MI 
Sbjct: 575 YLNMINNRRKCDIY----TYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIG 630

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + G+ E A+D+   +   G++PD  T+  I      EG +E+  +  + M E    P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAP 690

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           +    N L+  L   G + +A  +      K  ++++ T + LIS
Sbjct: 691 NSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLIS 735



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 127/278 (45%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD ++YNT++D     G+++E   LL  M   GL P+  TYN L+ GYCK   + +A  +
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSL 539

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M      P V TYN +++G    G   EA  L   M + +   D+ TY  ++N    
Sbjct: 540 FREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCR 599

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +    EAFK+   L    ++ +  T NIMI    K G+ + A  +   +   G  PD  T
Sbjct: 600 NNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVET 659

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  + +   K G++EE   +   M   G   N+  LN ++  L     +  A + L+   
Sbjct: 660 YRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLD 719

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++ + L+  +   LI+ Y R E    A  L ++ +  Q
Sbjct: 720 EKNFSLEASTTSMLISIYSRAEYQQLAKSLPEKYRFPQ 757



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 66/330 (20%)

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--------------------K 282
           + +A+ R   L+ V  G   +G       + ALKL+DEM                    +
Sbjct: 7   VTAAADRCLELERVIAGRARSGSL---GLDDALKLFDEMLTYARPASVRTFNRLLTVVSR 63

Query: 283 ER---------------------QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
            R                     ++ PS+ TY  +I    + G+ +        +L++G 
Sbjct: 64  ARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGW 123

Query: 322 IPDETT-FNTIIHGFCSEGQVEKALQ-FHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
             + T  F  ++ G C   +V++A      +M E     ++++ NILL GLC E   E+A
Sbjct: 124 SLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEA 183

Query: 380 LKFFRSWILKGKAVDS---VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           L+        G    +   VTY T+I  LCK + ++ A G+   M +K + P+ +TY  +
Sbjct: 184 LELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCL 243

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
               + +G+ +E                 VVQ     +   + P  + Y+  ++  C  G
Sbjct: 244 IHGYLSTGKWKE-----------------VVQMLQEMSTHGLQPDCVIYAVLLDYLCKNG 286

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           R  +A  IF+   +KGI  + + Y  L++G
Sbjct: 287 RCTEARNIFDSLIRKGIKPHVTIYGILLHG 316



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 44/93 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +G +PD  TY  I + L K+G L E+ +L S M++ G  PN    N LV      G 
Sbjct: 648 ISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGD 707

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA 93
           +  A   +  + +     +  T +MLI+ +  A
Sbjct: 708 IGRAGVYLSKLDEKNFSLEASTTSMLISIYSRA 740


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 260/545 (47%), Gaps = 47/545 (8%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  NT++    K+G + E   L+  M+ QGL PN  T+N  +S  CK G + +A R+   
Sbjct: 208 VVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQD 267

Query: 71  MTQN----KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           M ++       PD  T++++++G+C+AG ++EA  L   M     L  V +YN  ++   
Sbjct: 268 MQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +GR  EA +L+ E+   GI+PN+ T+NI++   CKEGK   A ++   +     SPD V
Sbjct: 328 RNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVV 387

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +L+ A C  GN+  A R++D M +KG   N+ T N +L +L    +  EA  LL   
Sbjct: 388 TYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERM 447

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE----------------------- 283
           +++GY LD      +I G  R+ + + A+ + D M E                       
Sbjct: 448 NEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSIS 507

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           ++ +P   TY+ +I  L + G+ ++A   L E++   + PD   ++T IHG+C  G+   
Sbjct: 508 QRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSL 567

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A++    M +K   P   T N+L+ G   +   E+ +K       KG + + +TYN+LI 
Sbjct: 568 AIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIK 627

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKI 462
           S C++  +  A  LL EM + +L P+  ++  +  A  +      AQ  F + +   G+ 
Sbjct: 628 SFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQ- 686

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                               + Y     E  + G++ +A  I E   +  ++I    Y  
Sbjct: 687 ------------------KEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQ 728

Query: 523 LMNGL 527
           +++GL
Sbjct: 729 IISGL 733



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 262/576 (45%), Gaps = 71/576 (12%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN ++ A  ++ +L+ V  L  D+   G  P+  T N+L+   C  G ++ A RV
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167

Query: 68  VDLMTQNK-------------------------SLP--DVWTYNMLINGWCNAGMLEEAF 100
            D M                              +P  ++   N ++ G+C  G++EEA 
Sbjct: 168 FDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAE 227

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE---HGI-KPNAVTHNIM 156
           RL + M    L P+VVT+N  I+   ++GR ++A+++  ++ E   HG+ +P+ VT ++M
Sbjct: 228 RLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVM 287

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +  +C  G +D+A  +V  M   GF     +YN  +    + G + EA  ++  M  +G+
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGI 347

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + N+ T N I+  LC E K  +A  + N         D V+Y +L+  Y        A +
Sbjct: 348 QPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANR 407

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           + DEM ++   P++FTYN ++  L ++G+T +A  +L  + + G   D    N II G C
Sbjct: 408 ILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLC 467

Query: 337 SEGQVEKALQFHNKMVEK----------SF-------------KPDIVTCNILLSGLCRE 373
              +++ A+   + M E+          SF              PD +T +IL+S LC+E
Sbjct: 468 RNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKE 527

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G  ++A K     I+K  + DSV Y+T I   CK  +   A  +L +ME+K   P   TY
Sbjct: 528 GRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTY 587

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +     E  + EE  K  S M E G                 I P+ ++Y+  I   C
Sbjct: 588 NLLIRGFEEKHKSEEIMKLMSEMKEKG-----------------ISPNVMTYNSLIKSFC 630

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            QG    A+ + +E  Q  +  N +++  L+    K
Sbjct: 631 QQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 257/523 (49%), Gaps = 62/523 (11%)

Query: 43  PNRTTYNILVSGYCKLGWLKEA-MRVVDLMTQNKSL----PDVWTYNMLINGWCNAGMLE 97
           P    YN L+     L  L+E+ + +V+ + ++  L    PDV+T N+L+   C+AG +E
Sbjct: 108 PTTPVYNRLI-----LAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRME 162

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
            A R+   M +     +  ++  L   +  +GRS++A K++D +       N V  N ++
Sbjct: 163 LAQRVFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGMPSM----NLVVCNTVV 214

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG---RK 214
             +CKEG +++A ++V  M   G +P+ VT+N  I A CKAG + +A+R+   M    + 
Sbjct: 215 AGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQH 274

Query: 215 GL-KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           GL + + +T + +L   C    +DEA +L++     G+     SY   ++G  R+ +   
Sbjct: 275 GLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGE 334

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A +L  EM    I P+++TYN ++ GL + GK   A  + N +    M PD  T+ +++H
Sbjct: 335 AQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLH 394

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            +CS+G +  A +  ++M +K   P+  T N+LL  L R G   +A +       KG ++
Sbjct: 395 AYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSL 454

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG-----------------------PDR 430
           D+   N +I  LC+  RL+ A  ++  M E+  G                       PD+
Sbjct: 455 DTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQ 514

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ + +AL + GR +EA+K         K+   +V+        +I P S+ Y   I+
Sbjct: 515 ITYSILISALCKEGRFDEAKK---------KLLEMIVK--------DISPDSVIYDTFIH 557

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            +C  G+   A+++  +  +KG   +  TY  L+ G  ++ KS
Sbjct: 558 GYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKS 600



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 233/473 (49%), Gaps = 24/473 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT++ +L      G ++E R L+  M+  G +    +YN  +SG  + G + EA  +
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQEL 338

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      P+ +TYN++++G C  G   +A R+   + S  + PDVVTY +L++ +  
Sbjct: 339 LREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCS 398

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A +++DE+ + G  PN+ T+N++++   + G+  +A +++  M E G+S D   
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458

Query: 188 YNTLIDANCKAGNMEEAFRMMDVM--------GRKGLKM---------------NTITLN 224
            N +ID  C+   ++ A  ++D M        GR G                  + IT +
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++  LC E + DEA   L     +    D V Y T I GY +  K + A+K+  +M+++
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              PST TYN +I G  +  K+E+ + +++E+ + G+ P+  T+N++I  FC +G V KA
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKA 638

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           +   ++M++    P+I + ++L+   C+      A   F +  L+      V Y  + + 
Sbjct: 639 MPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDA-ALRTCGQKEVLYCLMCTE 697

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           L    +  +A  +L    E ++    + Y  I + L E G ++ A     +++
Sbjct: 698 LTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLI 750



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 217/501 (43%), Gaps = 73/501 (14%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P++ TYN I+  L K+GK  + R + + ++   + P+  TY  L+  YC  G +  A
Sbjct: 346 GIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAA 405

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++D M Q    P+ +TYN+L+     AG   EA RL + M       D    N +I+ 
Sbjct: 406 NRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDG 465

Query: 125 FFESGRSMEAFKLIDELDEHG-----------------------IKPNAVTHNIMIKWYC 161
              + R   A  ++D + E G                         P+ +T++I+I   C
Sbjct: 466 LCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALC 525

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           KEG+ D+A K +  M     SPD V Y+T I   CK G    A +++  M +KG   +T 
Sbjct: 526 KEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTR 585

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T                                   Y  LI G+    K+   +KL  EM
Sbjct: 586 T-----------------------------------YNLLIRGFEEKHKSEEIMKLMSEM 610

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           KE+ I P+  TYN++I    Q G   +A+ +L+E+LQ+ ++P+ T+F+ +I  +C     
Sbjct: 611 KEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDF 670

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREG-------ILEKALKFFRSWILKGKAVD 394
             A    +  +    + +++ C ++ + L   G       ILE AL+   S       + 
Sbjct: 671 PSAQMVFDAALRTCGQKEVLYC-LMCTELTTYGKWIEAKNILEMALEMRVS-------IQ 722

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           S  Y  +IS LC+   ++ A  LL  +  K+   D   +  +  AL + G+ ++    ++
Sbjct: 723 SFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSA 782

Query: 455 IMVETGKINHQVVQPNTSKTP 475
            M+E    N  +   +   TP
Sbjct: 783 KMMEMADRNDGLGTDSGKITP 803



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 19/225 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P   TYN ++    +K K  E+  L+S+MK++G+ PN  TYN L+  +C+ G 
Sbjct: 575 MEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGM 634

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWC------NAGML-EEAFRLRKEMESLKLLP 113
           + +AM ++D M QN+ +P++ ++++LI  +C      +A M+ + A R   + E      
Sbjct: 635 VNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKE------ 688

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
             V Y  +       G+ +EA  +++   E  +   +  +  +I   C+ G++D A  ++
Sbjct: 689 --VLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLL 746

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
           + +       D   +  +IDA    G  ++    +D++  K ++M
Sbjct: 747 KLLIAKRHLFDPAAFMPVIDALGDRGKKQD----VDMLSAKMMEM 787



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 53/269 (19%)

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           L S   P    +N +I     E +++     +  ++    +PD+ T N+LL  LC  G +
Sbjct: 102 LTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRM 161

Query: 377 EKALKFF---------------RSWILKGKAVDS------------VTYNTLISSLCKER 409
           E A + F               R +   G+++D+            V  NT+++  CKE 
Sbjct: 162 ELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEG 221

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            +E+A  L+  M  + L P+  T+ A  +AL ++GR+ +A +    M E  +  H + +P
Sbjct: 222 LVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQ--HGLPRP 279

Query: 470 NTSK---------TPEEIDPSSI---------------SYSEKINEHCSQGRYKDALQIF 505
           +                +D + +               SY+  ++     GR  +A ++ 
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELL 339

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            E   +GI  N  TY  +++GL K  K+ 
Sbjct: 340 REMAHEGIQPNSYTYNIIVSGLCKEGKAF 368


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 250/520 (48%), Gaps = 17/520 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD+  Y++ + A     +     +LL+ M  +G  P+  TY+  ++   K+  
Sbjct: 177 MQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSR 236

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA+ ++  M      P+V  Y+  I+     G  E A  L KEM ++ L PDV+TY+T
Sbjct: 237 WKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYST 296

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G+   AF+L+ E+   G+  N +T++I+I    K G+ ++A  ++R M+ENG
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD +TY++ I A  K G  EEA  ++  M  +G+  N I+   ++       +  EA 
Sbjct: 357 VAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAI 416

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   D ++Y   I    +  +  +AL L  EM    + P+  +YN+ I   
Sbjct: 417 DLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDAC 476

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +++G+++ A+++L E+   G+ PD  T++ +I       Q E+AL    +M  +   PD+
Sbjct: 477 AKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDV 536

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+CN  ++   + G  E+AL         G   D+++Y T I +  K  R ++   LL E
Sbjct: 537 VSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLRE 596

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    L PD  +Y    +A    G  +EA      M+  G                 + P
Sbjct: 597 MSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG-----------------LSP 639

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             ++Y+  IN     GR+K+A  +  +    G+A + +++
Sbjct: 640 DVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSF 679



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 214/435 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G  P+ + Y+  + A  K G+     DLL +M   GL P+  TY+ ++    K G 
Sbjct: 247 MKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQ 306

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A R++  M     + ++ TY+++I      G  EEA  L +EM+   + PDV+TY++
Sbjct: 307 WEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS 366

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I+   + G+  EA  L+ E+   G+ PNA+++ I+I    K G+  +A  +++ M+ +G
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD + Y+  IDA  +A   E+A  ++  M   GL  N I+ N+ +       +   A 
Sbjct: 427 VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAV 486

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL      G   D ++Y  +I       +   AL L+ EM+ + I P   + N  I   
Sbjct: 487 ELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINAC 546

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +Q G  E+A+D+L E+   G++PD  ++ T I       + ++ +    +M      PD 
Sbjct: 547 AQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDA 606

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++    +S    +G+ ++AL   R  +  G + D VTYN+ I++  K  R ++A  LL +
Sbjct: 607 ISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQ 666

Query: 421 MEEKKLGPDRYTYAA 435
           M    L PD  ++ A
Sbjct: 667 MPTFGLAPDVNSFNA 681



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 208/433 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD +TY+T++DA  K+G+      LL +M  +G+V N  TY+I++    K G 
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQ 341

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ ++  M +N   PDV TY+  I+     G  EEA  L +EM    + P+ ++Y  
Sbjct: 342 WEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGI 401

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + GR  EA  L+ E+  HG+ P+ + ++  I    +  + ++A  ++R M   G
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATG 461

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ ++YN+ IDA  K G  + A  ++  M   GL  + IT + ++ +    ++ +EA 
Sbjct: 462 LTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEAL 521

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     ++G   D VS  T I    +      AL +  EM    ++P   +Y   I   
Sbjct: 522 DLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDAC 581

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++  + ++ ID+L E+   G+ PD  ++   +     +G  ++AL     M+     PD+
Sbjct: 582 AKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDV 641

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N  ++   + G  ++A    R     G A D  ++N  I +     +   A  +L E
Sbjct: 642 VTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFE 701

Query: 421 MEEKKLGPDRYTY 433
           M    + P+  TY
Sbjct: 702 MRALGVSPNEATY 714



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 214/465 (46%), Gaps = 19/465 (4%)

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           ++A+ V+D M +    PD   Y+  I    NA   E A  L   M +    PDV+TY++ 
Sbjct: 168 RKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSA 227

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I    +  R  EA  L+  +   G+KPN + ++  I    K G+ + A  +++ M   G 
Sbjct: 228 IAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGL 287

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD +TY+T+IDA  K G  E AFR++  M  KG+  N IT + ++       + +EA  
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL    + G   D ++Y + I+   +  +   A+ L  EM    + P+  +Y  +I   +
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACA 407

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+  +AID+L E+   G+ PD   ++  I       + E+AL    +M      P+++
Sbjct: 408 KRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVI 467

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           + N  +    + G  + A++  R     G A D +TY+ +I+S    R+ E+A  L  EM
Sbjct: 468 SYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM 527

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           + + + PD  +      A  + G  EEA      M   G +                 P 
Sbjct: 528 QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV-----------------PD 570

Query: 482 SISYSEKINEHCSQG-RYKDALQIFEETRQKGIAINKSTYMNLMN 525
           +ISY   I+  C++G R+K+ + +  E    G+  +  +Y   M+
Sbjct: 571 AISYRTAIDA-CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMS 614



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 168/368 (45%), Gaps = 35/368 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD +TY++ + A  KKG+  E   LL +M  +G+ PN  +Y I++S   K G 
Sbjct: 352 MQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGR 411

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ ++  M  +   PDV  Y+  I+    A   E+A  L +EM +  L P+V++YN+
Sbjct: 412 WREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNS 471

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI-------KW-------------- 159
            I+   ++GRS  A +L+ E+  HG+ P+ +T++ +I       +W              
Sbjct: 472 AIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQG 531

Query: 160 -------------YCKEGKI-DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                         C +G   ++A  ++  M   G  PD ++Y T IDA  K    +E  
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEII 591

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M   GL  + I+    +     +    EA +LL      G   D V+Y + I   
Sbjct: 592 DLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINAC 651

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +  +   A  L  +M    + P   ++NA I       +   A+++L E+   G+ P+E
Sbjct: 652 AKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNE 711

Query: 326 TTFNTIIH 333
            T+ T ++
Sbjct: 712 ATYLTAMY 719



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 22/251 (8%)

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           Q G   +A+D+L+ + + G+ PD   +++ I    +  Q E+A++    M  +   PD++
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLS 419
           T +  ++   +    ++A+   RS  +KG+ V  + + Y+  IS+  K  + E A  LL 
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRS--MKGQGVKPNVIVYSAAISACRKGGQWETAVDLLK 280

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKTP 475
           EM    L PD  TY+ +  A  + G+ E A +    M   G     I + +V    +K  
Sbjct: 281 EMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWG 340

Query: 476 E--------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +               + P  I+YS  I+    +G++++A+ +  E   +G+  N  +Y 
Sbjct: 341 QWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYG 400

Query: 522 NLMNGLIKRRK 532
            +++   KR +
Sbjct: 401 IVISACAKRGR 411


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 265/563 (47%), Gaps = 38/563 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FGC PD  TYN+IL  + +K        + + M K    PNR T+ IL++G CK G 
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+++ D MTQ    P+   Y ++++G C A   ++  RL   M+     PD +T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + G+  EAF L+   ++ G       ++ +I    +  + D+  +  R M + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y  LI   C+ G ++ A  M++ M ++GL  +T   N ++   C    LD+A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    SK   +    +Y  LI G  R+   + A +++++M+     PS  T+NA+I GL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 301 SQSGKTEQAIDMLNEL-----------LQSGM--IPDETTFNTIIHGFCSEGQVEKALQF 347
            ++G+ E+A  +  ++           L  G   + D  +  T++   C  G + KA + 
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             ++ +    PDI+T N+L++G C+   +  A K FR   LKG + DSVTY TLI    +
Sbjct: 517 LMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHR 576

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL------------------EEA 449
             R EDAF +L +M +    P    Y  + T     G+L                  +E 
Sbjct: 577 VDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDET 636

Query: 450 QKFTSIMVETGKINHQV---VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
            K      E G++   V   ++ N      EI P    Y+  +   C   R ++AL+IF 
Sbjct: 637 LKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAP----YTIWLIGLCQARRSEEALKIFL 692

Query: 507 ETRQKGIAINKSTYMNLMNGLIK 529
             ++  + +N  + + L+NGL K
Sbjct: 693 VLKECQMDVNPPSCVMLINGLCK 715



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 246/527 (46%), Gaps = 30/527 (5%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VT+N ++D L K    +    +L ++K   +     T+++L++ Y K G  ++A+     
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      PDV+TYN +++      +   A  +  +M  L   P+  T+  L+N   ++G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           + +A K+ DE+ + GI PN + + I++   C+  + D   +++  M+ +G  PD +T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+D  CK G ++EAF ++ +  ++G  +     ++++  L   K+ DE         K G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V Y  LI G+      + AL + ++M +R + P T+ YNA+I G    G  ++A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  E+ ++   P   T+  +I G C  G +++A Q  N+M      P I+T N L+ GL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 371 CREGILEKALKFF--------RSWILK-----GKAVDSVTYNTLISSLCKERRLEDAFGL 417
           C+ G LE+A   F         S  L+      + +D+ +  T++  LC+   +  A+ L
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L ++ +  + PD  TY  +     ++  +  A K    +   G                 
Sbjct: 517 LMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGH---------------- 560

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
             P S++Y   I+      R +DA ++ ++  + G   + + Y  LM
Sbjct: 561 -SPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 606



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 221/473 (46%), Gaps = 14/473 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD++T N +LD   K G+++E   LL   +K+G V     Y+ L+ G  +   
Sbjct: 262 MKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E       M +    PDV  Y +LI G+C  GM++ A  +  +M    L PD   YN 
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + G   +A  L  E+ ++   P + T+ I+I   C+ G +D+A +I   ME  G
Sbjct: 382 LIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLG 441

Query: 181 FSPDCVTYNTLIDANCKAGNMEEA---FRMMDVMGRKGL----------KMNTITLNTIL 227
            SP  +T+N LID  CKAG +EEA   F  M++     L           M+T +L T++
Sbjct: 442 CSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMV 501

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC    + +AY LL   +  G   D ++Y  LI G+ + +  N A KL+ E++ +   
Sbjct: 502 ERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHS 561

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P + TY  +I G  +  + E A  +L++++++G  P    +  ++   C +G++  A   
Sbjct: 562 PDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSL 621

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             K +      +  T  +       +G LEKA++       K    +   Y   +  LC+
Sbjct: 622 WLKYLRSLPSQEDETLKLAEEHF-EKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQ 680

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            RR E+A  +   ++E ++  +  +   +   L + G LE A       +E G
Sbjct: 681 ARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 733



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 234/488 (47%), Gaps = 53/488 (10%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y++++D LF+  + +EV++    M K G+ P+   Y IL+ G+C++G +  A+ +++ MT
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           Q    PD + YN LI G+C+ G+L++A  L+ E+      P   TY  LI     +G   
Sbjct: 369 QRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLD 428

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP--------- 183
           EA ++ ++++  G  P+ +T N +I   CK G++++A  +   ME  G +P         
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI-GKNPSLFLRLSQG 487

Query: 184 -----DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
                D  +  T+++  C++G + +A++++  +   G+  + +T N +++  C  K ++ 
Sbjct: 488 ADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNING 547

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+ L      +G+  D V+YGTLI G+ R ++   A ++ D+M +    PS+  Y  ++ 
Sbjct: 548 AFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMT 607

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIP---DET----------------------------- 326
              + GK   A  +  + L+S  +P   DET                             
Sbjct: 608 WSCRKGKLSVAFSLWLKYLRS--LPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNN 665

Query: 327 ----TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
                +   + G C   + E+AL+    + E     +  +C +L++GLC++G LE A+  
Sbjct: 666 FEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDI 725

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   + KG  +     N L+ SL  + +++ A  LL+ M       D Y +  I + L+ 
Sbjct: 726 FLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLS 785

Query: 443 SGRLEEAQ 450
             + +E +
Sbjct: 786 VWKAQEME 793



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 211/467 (45%), Gaps = 48/467 (10%)

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           +L   N  +P   T+++LI  +  +GM E+A     +M+     PDV TYN++++   + 
Sbjct: 121 ELKNSNIQIPPP-TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQK 179

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
              + A  + +++ +    PN  T  I++   CK GK D A K+   M + G  P+ + Y
Sbjct: 180 EVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIY 239

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             ++   C+A   ++  R+++ M   G   ++IT N +L   C   ++DEA+ LL    K
Sbjct: 240 TIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEK 299

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            GY L    Y +LI G FR ++       +DE++E              W          
Sbjct: 300 EGYVLGIKGYSSLIDGLFRAKR-------YDEVQE--------------W---------- 328

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
                 ++ ++G+ PD   +  +I GFC  G V+ AL   N M ++   PD    N L+ 
Sbjct: 329 ----CRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384

Query: 369 GLCREGILEKALKFFRSWILKGKAVD----SVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           G C  G+L+KA    RS  L+    D    S TY  LI  +C+   L++A  + ++ME  
Sbjct: 385 GFCDVGLLDKA----RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENL 440

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P   T+ A+   L ++G LEEA+     M E GK N  +    +      +D +S+ 
Sbjct: 441 GCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGK-NPSLFLRLSQGADRVMDTASL- 497

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
               +   C  G    A ++  +    G+  +  TY  L+NG  K +
Sbjct: 498 -QTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAK 543



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 146/326 (44%), Gaps = 17/326 (5%)

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E  FR      R+    + +T N ++  L  +   D  + +L         +   ++  L
Sbjct: 78  ELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVL 137

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I  Y +   A +A++ + +MK+    P  FTYN+++  + Q      A+ + N++L+   
Sbjct: 138 IAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY 197

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            P+  TF  +++G C  G+ + AL+  ++M +K   P+ +   I+LSGLC+    +   +
Sbjct: 198 NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHR 257

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
              +  + G   DS+T N L+   CK  ++++AF LL   E++        Y+++   L 
Sbjct: 258 LLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLF 317

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
            + R +E Q++   M + G                 I+P  + Y+  I   C  G    A
Sbjct: 318 RAKRYDEVQEWCRKMFKAG-----------------IEPDVVLYTILIRGFCEVGMVDYA 360

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGL 527
           L +  +  Q+G++ +   Y  L+ G 
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGF 386



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           FRSW         VT+N +I  L K+   +  + +L E++   +     T++ +  A  +
Sbjct: 93  FRSW---------VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAK 143

Query: 443 SGRLEEAQKFTSIMVETG---------KINHQVVQPNTSKTPEEI---------DPSSIS 484
           SG  E+A +    M + G          I H +VQ         +         +P+  +
Sbjct: 144 SGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRAT 203

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +   +N  C  G+  DAL++F+E  QKGI  N   Y  +++GL + +++
Sbjct: 204 FVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 248/527 (47%), Gaps = 71/527 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYNT++  LF++G++++  +L  +M +QG+VP+  TY  ++   CK   + +A
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+  M  N   P+  TYN +I+G+  +G  +E   + +EM S  L+P++VT N+ ++ 
Sbjct: 282 ELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSS 341

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTH------------------------------- 153
             + G+S EA +  D +   G KPN VT+                               
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVAD 401

Query: 154 ----NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA---FR 206
               NI+I  Y K G +D+   I   M+E G  PD  TY  +I A  + G + +A   F 
Sbjct: 402 QRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFN 461

Query: 207 MMDVMGRK-----------GLKM----------------------NTITLNTILHTLCCE 233
            M  MG K           G  M                      N +  N+I+++LC E
Sbjct: 462 QMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKE 521

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++ EA+ + +     G   D +++ +LI GY    K  +A  + D M    I P   +Y
Sbjct: 522 GRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSY 581

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I G  ++G+ +  + +  E+L  G+ P   T+  I+HG  ++G+   A +  ++M+E
Sbjct: 582 NTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                DI TC I+L GLCR    ++A+  F+         +    NT+I ++ K R+ E+
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREE 701

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           A  L   +    L P+  TY  +   L++ G +EEA    S+M ++G
Sbjct: 702 AKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 224/463 (48%), Gaps = 3/463 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ--GLVPNRTTYNILVSGYCKL 58
           M   G  PD ++YNT++  L +  +     DLL  M K+  G  PN  TYN ++ G  + 
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G + +A  +   M Q   +PDV TY  +I+  C A  +++A  + ++M S    P+ VTY
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTY 300

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N +I+ +  SG+  E   +  E+   G+ PN VT N  +   CK GK  +A +   +M  
Sbjct: 301 NCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAA 360

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+ VTY+ L+      G   +   + + M   G+  +    N ++        +DE
Sbjct: 361 KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDE 420

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
             ++     ++G   D  +YG +I  + R  +   A+  +++M    + P    Y+++I 
Sbjct: 421 TMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQ 480

Query: 299 GLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           G    G   +A ++++E++  G+  P+   FN+II+  C EG+V +A    + ++    +
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGER 540

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD++T N L+ G    G +EKA     + I  G   D V+YNTLI   C+  R++D   L
Sbjct: 541 PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             EM  K + P   TY  I   L   GR   A+K    M+E+G
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 261/526 (49%), Gaps = 23/526 (4%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLL-SDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           D +  + +L  L+   + ++V +LL   M + G+ P+  +YN +V   C+    + A+ +
Sbjct: 153 DVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDL 212

Query: 68  VDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +  M +      P+V TYN +I+G    G + +A  L  EM    ++PDVVTY ++I+  
Sbjct: 213 LHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDAL 272

Query: 126 FESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            ++ R+M+  +L+  ++  +G +PN VT+N MI  Y   G+  +   + R M   G  P+
Sbjct: 273 CKA-RAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPN 331

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT N+ + + CK G  +EA    D M  KG K N +T + +LH    E    +   L N
Sbjct: 332 IVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN 391

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S    G   D+  +  +I  Y +    +  + ++ +M+E+ ++P   TY  +I   S+ G
Sbjct: 392 SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF-KPDIVTC 363
           +   A+D  N+++  G+ P+   ++++I GFC  G + KA +  ++M+ +   +P+IV  
Sbjct: 452 RLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFF 511

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N +++ LC+EG + +A   F   I  G+  D +T+N+LI       ++E AFG+L  M  
Sbjct: 512 NSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMIS 571

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD  +Y  +      +GR+++       M+  G                 + P++I
Sbjct: 572 AGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKG-----------------VKPTTI 614

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +Y   ++   + GR   A ++  E  + G  ++ ST   ++ GL +
Sbjct: 615 TYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 229/449 (51%), Gaps = 1/449 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ VT N+ + +L K GK  E  +    M  +G  PN  TY++L+ GY   G   + 
Sbjct: 327 GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDM 386

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + + M  N  + D   +N++I+ +   GM++E   +  +M+   ++PD  TY  +I  
Sbjct: 387 LNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAA 446

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-P 183
           F   GR  +A    +++   G+KP  + ++ +I+ +C  G + KA ++V  M   G   P
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRP 506

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + V +N++I++ CK G + EA  + D +   G + + IT N+++       K+++A+ +L
Sbjct: 507 NIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVL 566

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           ++    G   D VSY TLI GY R+ + +  L L+ EM  + + P+T TY  ++ GL   
Sbjct: 567 DAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFND 626

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+T  A  M +E+++SG   D +T   I+ G C     ++A+    K+   + K +I   
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAII 686

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  + +    E+A + F S    G   ++ TY  +I +L KE  +E+A  + S ME+
Sbjct: 687 NTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEK 746

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
               P       I   L+E G + +A  +
Sbjct: 747 SGCAPSSRLLNYIIRVLLEKGEIVKAGNY 775



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 221/434 (50%), Gaps = 10/434 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G + D   +N ++DA  K+G ++E   + + M++QG++P+  TY I+++ + ++G 
Sbjct: 393 MEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGR 452

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-LPDVVTYN 119
           L +AM   + M      P+   Y+ LI G+C  G L +A  L  EM S  +  P++V +N
Sbjct: 453 LADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFN 512

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++IN   + GR +EA  + D +   G +P+ +T N +I  Y   GKI+KA  ++  M   
Sbjct: 513 SIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISA 572

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD V+YNTLID  C+ G +++   +   M  KG+K  TIT   ILH L  + +   A
Sbjct: 573 GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGA 632

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +   + G  +D  + G ++ G  R+   + A+ ++ ++    +  +    N MI  
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDA 692

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           + +  K E+A ++ + +  +G++P+ +T+  +I     EG VE+A    + M +    P 
Sbjct: 693 MYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPS 752

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
               N ++  L  +G + KA  +      K  ++++ T + L++   +E +         
Sbjct: 753 SRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKY-------- 804

Query: 420 EMEEKKLGPDRYTY 433
             E+ KL P +Y +
Sbjct: 805 -WEDVKLLPAKYQF 817



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 208/446 (46%), Gaps = 22/446 (4%)

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
           R+E      LP V TYN L++    + R    F L     + G+K + +  +I++K    
Sbjct: 107 REEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYH 166

Query: 163 EGKIDKACK-IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--GLKMN 219
             + D     ++  M E G  PD ++YNT++   C+    + A  ++  M +K  G   N
Sbjct: 167 AKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPN 226

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T NT++H L  E ++ +A  L +   ++G   D V+Y ++I    +    ++A  +  
Sbjct: 227 VVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLR 286

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           +M      P+  TYN MI G S SG+ ++   M  E+   G++P+  T N+ +   C  G
Sbjct: 287 QMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHG 346

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           + ++A +F + M  K  KP++VT ++LL G   EG     L  F S    G   D   +N
Sbjct: 347 KSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFN 406

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMV- 457
            +I +  K   +++   + ++M+E+ + PD  TY  +  A    GRL +A  KF  ++  
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 458 ---ETGKINHQVVQ-----PNTSKTPEEID---------PSSISYSEKINEHCSQGRYKD 500
                G + H ++Q      N  K  E +          P+ + ++  IN  C +GR  +
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNG 526
           A  IF+     G   +  T+ +L++G
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDG 552


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 213/432 (49%), Gaps = 36/432 (8%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEA 64
           C PD V YNT++    K G  +   D+   +K++G   PN  +++ LV   CK+    +A
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V   M       DV   N LI+  C  GML +A RL   M +   + DV TY+ L++ 
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR+ +A ++   + + G  P+ V +N++I    K+GK+D+A +++ +M   G  PD
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN +ID     G  E+A+    +M R+    + +T NT+L+ L   ++ DEA     
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA----- 241

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                                           L+DEM+  + MP   T+  +I  L+++G
Sbjct: 242 ------------------------------CDLFDEMQANKCMPDLTTFGTLIDTLAKAG 271

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A++    L++ G +P+   +N +I GFC  GQV+K  +    M+E S  PD +T  
Sbjct: 272 RMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 331

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ G  R G    A++  +  + +G      TYN LI SL    ++EDA+ L  EM  K
Sbjct: 332 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 391

Query: 425 KLGPDRYTYAAI 436
              PD  TY+A+
Sbjct: 392 GFNPDMQTYSAL 403



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 5/386 (1%)

Query: 78  PDVWTYNMLINGWCNAGMLEEA---FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           PDV  YN LI G+C AG  + A   FR  K+  S K  P+ V+++TL+    +  R+ +A
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCK--PNAVSFDTLVIFLCKMSRATDA 66

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
             +  E+   G++ +    N +I   C+ G + +A +++ +M  + F  D  TY+ L+DA
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
             KAG   +A  +   M + G   +T+  N ++  L  + K+DEA  LL   +++G   D
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y  +I       +  +A   +  MK R+  P   TYN ++ GL +  +T++A D+ +
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 246

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           E+  +  +PD TTF T+I      G++E AL+   ++V+    P+    N L+SG CR G
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSG 306

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            ++K  + F+  I      DS+TY  L+    +      A  LL EM  +   P   TY 
Sbjct: 307 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYN 366

Query: 435 AIHTALVESGRLEEAQKFTSIMVETG 460
            +  +L  +G++E+A      M+  G
Sbjct: 367 VLIRSLSMAGQVEDAYTLFKEMIAKG 392



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 185/381 (48%), Gaps = 18/381 (4%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCVTYNTLIDANCKAGNMEEAFR 206
           P+ V +N +I  YCK G  D+A  + R +++ G   P+ V+++TL+   CK     +A  
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +   M   GL+ +    NT++H  C    L +A  LL+  +   + LD  +Y  L+    
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +  +A +AL+++  M++   MP T  YN +I  L + GK ++A+++L ++ + G++PD  
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+N +I    S G+ EKA  F   M  +   PD+VT N LL+GL +    ++A   F   
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
                  D  T+ TLI +L K  R+EDA    + + +    P+ Y Y A+ +    SG++
Sbjct: 249 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQV 308

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           ++  +    M+E                     P SI+Y+  +     +G    A+++ +
Sbjct: 309 DKGYELFQDMIECSCF-----------------PDSITYTILVLGFSRRGHTSMAMELLQ 351

Query: 507 ETRQKGIAINKSTYMNLMNGL 527
           E  ++G     +TY  L+  L
Sbjct: 352 EMVREGHTPALATYNVLIRSL 372



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 18/247 (7%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQ 346
           P    YN +I G  ++G  ++A+DM   L Q G   P+  +F+T++   C   +   AL 
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              +M+    + D+  CN L+   CR G+L +A +           +D  TY+ L+ +L 
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           K  R   A  + S M++    PD   Y  + + L + G+++EA +    M   G      
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG------ 182

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                      I P   +Y+  I+   S GRY+ A   F   +++  + +  TY  L+NG
Sbjct: 183 -----------IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNG 231

Query: 527 LIKRRKS 533
           L K R++
Sbjct: 232 LKKLRRT 238



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P++  YN ++    + G++++  +L  DM +    P+  TY ILV G+ + G    A
Sbjct: 287 GHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 346

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           M ++  M +    P + TYN+LI     AG +E+A+ L KEM +    PD+ TY+ L N
Sbjct: 347 MELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 405


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 239/443 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V+Y  ++    + G+L++V  L+ ++K +GL P+   YN ++   CK G + EA
Sbjct: 272 GNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEA 331

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +    PD   Y  +I+G+C  G +  A +L  EM   K++PD+VTY ++I+ 
Sbjct: 332 EQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHG 391

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SG+ +EA ++ +E+   G++P+ VT+  +I  YCK G++ +A  +   M + G +P+
Sbjct: 392 ICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPN 451

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY  L D  CK G ++ A  ++  M RKGL+ N  T NTI++ LC    +++   L+ 
Sbjct: 452 VVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLME 511

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+Y D ++Y TL+  Y +  +  +A +L   M  +++ P+  T+N ++ G   SG
Sbjct: 512 EMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSG 571

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E    ++  +L+ G++P+ TTFN+++  +C +  +    + +  M ++   PD  T N
Sbjct: 572 MLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYN 631

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+ G C+   +++A    +  + KG +V + TY+ LI    K ++  +A  L  EM + 
Sbjct: 632 ILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKH 691

Query: 425 KLGPDRYTYAAIHTALVESGRLE 447
            L  ++  Y        E G  E
Sbjct: 692 GLVAEKDIYDIFVDVNYEEGNWE 714



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 234/459 (50%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G   + V+ N +L  L + GK+ E  +LL  M  +G  P+  +Y ++VSGYC++G L +
Sbjct: 236 LGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDK 295

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            +++VD +      PD + YN +I   C  G + EA +L + M    + PD V Y T+I+
Sbjct: 296 VLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVIS 355

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F + G    A KL DE+    I P+ VT+  +I   CK GK+ +A ++   M   G  P
Sbjct: 356 GFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEP 415

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY  LID  CKAG M+EAF + + M +KGL  N +T   +   LC   ++D A  LL
Sbjct: 416 DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELL 475

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  S++G   +  +Y T++ G  +     + +KL +EM      P T TY  ++    + 
Sbjct: 476 HEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKM 535

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A ++L  +L   + P   TFN +++GFC  G +E   +    M+EK   P+  T 
Sbjct: 536 GEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTF 595

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+   C +  +    + +++   +G   DS TYN LI   CK R +++A+ L  EM E
Sbjct: 596 NSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 655

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           K       TY A+     +  +  EA+K    M + G +
Sbjct: 656 KGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLV 694



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 247/489 (50%), Gaps = 17/489 (3%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           +  +  + G+  N  + NI++   C+LG ++EA  ++  MT   + PDV +Y ++++G+C
Sbjct: 229 VFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYC 288

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G L++  +L  E++   L PD   YN +I    ++G  +EA +L+  + + G+ P+ V
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +  +I  +CK G +  ACK+   M      PD VTY ++I   CK+G M EA  M + M
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             KGL+ + +T   ++   C   ++ EA+ + N   ++G   + V+Y  L  G  ++ + 
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A +L  EM  + + P+ +TYN ++ GL + G  EQ + ++ E+  +G  PD  T+ T+
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           +  +C  G++ KA +    M+ K  +P +VT N+L++G C  G+LE   +     + KG 
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             ++ T+N+L+   C +  +     +   M ++ + PD  TY  +     ++  ++EA  
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               MVE G                    ++ +Y   I     + ++ +A ++FEE R+ 
Sbjct: 649 LHKEMVEKG-----------------YSVTAATYDALIRGFYKRKKFVEARKLFEEMRKH 691

Query: 512 GIAINKSTY 520
           G+   K  Y
Sbjct: 692 GLVAEKDIY 700



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 229/434 (52%), Gaps = 22/434 (5%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRF---FESGRSMEAFKLIDELDEHGIKPNA 150
           G + EA +L  ++    ++  V + N  ++R    FE  +   A K+ +E  E G+  N 
Sbjct: 185 GFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKI--AVKVFEEFPELGVCWNT 242

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           V+ NI++   C+ GK+ +A  ++  M + G  PD V+Y  ++   C+ G +++  +++D 
Sbjct: 243 VSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDE 302

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +  KGLK +    N I+  LC   ++ EA  LL    K G + D V Y T+I+G+ +   
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A KL+DEM+ ++I+P   TY ++I G+ +SGK  +A +M NE+L  G+ PDE T+  
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTA 422

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I G+C  G++++A   HN+MV+K   P++VT   L  GLC+ G ++ A +       KG
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              +  TYNT+++ LCK   +E    L+ EM+     PD  TY  +  A  + G + +A 
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +   IM+                  + + P+ ++++  +N  C  G  +D  ++ E   +
Sbjct: 543 ELLRIMLN-----------------KRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585

Query: 511 KGIAINKSTYMNLM 524
           KGI  N +T+ +LM
Sbjct: 586 KGIMPNATTFNSLM 599



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 167/320 (52%), Gaps = 2/320 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY  ++D   K G++ E   + + M ++GL PN  TY  L  G CK G +  A
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M++    P+V+TYN ++NG C  G +E+  +L +EM+     PD +TY TL++ 
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + + G   +A +L+  +    ++P  VT N+++  +C  G ++   +++  M E G  P+
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N+L+   C   NM     +   M  +G+  ++ T N ++   C  + + EA+ L  
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++GY +   +Y  LI G+++ +K   A KL++EM++  ++     Y+  +    + G
Sbjct: 652 EMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEG 711

Query: 305 KTEQAIDMLNELLQ--SGMI 322
             E  +++ +E +   SG I
Sbjct: 712 NWEITLELCDEFMTELSGTI 731


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 235/493 (47%), Gaps = 41/493 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC P    YN +LDAL  + K   +  L ++MKK GL+PN  TYNIL+   CK   +  
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A ++   M+     PD  TY  +++  C AG +++A  L    +     P V  YN LI+
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALID 252

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + GR   A KL+ E+ ++G+ PN V+++ +I   C  G ++ A  +   M   G   
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  T+  LI      G + EA  +  +M + G + N +  NT++H LC    L+EA  + 
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   + G   +  +Y  LI G+ +      A + W+ M      P+  TY  M+  L ++
Sbjct: 373 DQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF---------------H 348
              +QA  ++ ++   G  P+  TFNT I G C  G+VE A++                +
Sbjct: 433 SMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492

Query: 349 NKMVEKSFK--------------------PDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N++++  F+                    P++VT N +L G  R G++ +AL+ F   ++
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLE 447
           +G A DS+TYNT+I + CK+ +++ A  L+  +   K+  PD  TY ++         +E
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 448 EAQKFTSIMVETG 460
           EA  F    +  G
Sbjct: 613 EAMAFLDKAINQG 625



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 249/515 (48%), Gaps = 23/515 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY  +++ L ++ +++ V+ +L  MK  G+      +  +++GY ++G  ++A+++   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    P V  YN L++   +    +    L   M+   L+P+V TYN L+    ++ R 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A KL  E+   G  P+AVT+  M+   CK GKID A ++        F P    YN L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNAL 250

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CK G +E A +++  M   G+  N ++ + I+++LC    ++ A+ L      RG 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  ++  LI G F   K   AL LW  M +    P+   YN +I GL  +G  E+A+ 
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++ +SG +P+ TT++ +I GF   G +  A +  N+M+    +P++VT   ++  LC
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +  + ++A        L+G   +++T+NT I  LC   R+E A  LL  M+     P+  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 432 TYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTP------------ 475
           TY  +  AL    + EEA    Q+  +  ++   + +  V    S+              
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 476 --EEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
                 P SI+Y+  I+ +C QG+ K A Q+ E  
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 224/444 (50%), Gaps = 6/444 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTY T++ +L K GK+++ R+L    K     P+   YN L+ G CK G 
Sbjct: 205 MSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGR 259

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A++++  M  N   P+V +Y+ +IN  C +G +E AF L  +M       ++ T+  
Sbjct: 260 IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP 319

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI   F  G+  EA  L   + + G +PN V +N +I   C  G +++A ++   M+ +G
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY+ LID   K+G++  A    + M   G + N +T   ++  LC     D+A 
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQAN 439

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   +  G   + +++ T I G   + +   A+KL + M+    +P+  TYN ++  L
Sbjct: 440 SLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K E+A  +  E+    + P+  T+NT+++GF   G + +ALQ   K + +   PD 
Sbjct: 500 FRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559

Query: 361 VTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +T N ++   C++G ++ A +   R   +K    D +TY +LI   C    +E+A   L 
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619

Query: 420 EMEEKKLGPDRYTYAAIHTALVES 443
           +   + + P+  T+ A+     +S
Sbjct: 620 KAINQGICPNFATWNALVRCFFDS 643



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 194/437 (44%), Gaps = 29/437 (6%)

Query: 117 TYNTLINRFFESGRSME---AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           TY  +I R    GR  E      ++ ++   GI         +I  Y + G  ++A K+ 
Sbjct: 76  TYRVMIERL---GRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             + E G  P    YN L+DA       +    +   M + GL  N  T N +L  LC  
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D A+ L    S +G   D V+Y T+++   +  K + A +L    K     PS   Y
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVY 247

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           NA+I G+ + G+ E AI +L E++ +G+ P+  +++ II+  C  G VE A     +M  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +    +I T   L+ G    G L +AL  ++  I  G   + V YNTLI  LC    LE+
Sbjct: 308 RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV------ 467
           A  +  +M+     P+  TY+ +     +SG L  A +  + M+  G   + V       
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 468 ---------QPNT---SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                    Q N+     T E   P++I+++  I   C  GR + A+++ E  +  G   
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 516 NKSTYMNLMNGLIKRRK 532
           N +TY  L++ L +  K
Sbjct: 488 NITTYNELLDALFRMNK 504



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 176/388 (45%), Gaps = 57/388 (14%)

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           + +  +  A T+ +MI+   +E ++D    I++ M+ +G +     +  +I+   + G+ 
Sbjct: 66  NSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSA 125

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E+A +M   +G  G K      N +L  L  E K    + ++N                 
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK----FQMINP---------------- 165

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
                          L+  MK+  ++P+ FTYN ++  L ++ + + A  +  E+   G 
Sbjct: 166 ---------------LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGC 210

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD  T+ T++   C  G+++ A +   +     FKP +   N L+ G+C+EG +E A+K
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                +  G   + V+Y+ +I+SLC    +E AF L ++M  +    + +T+  +     
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
             G+L EA     +M++ G                  +P+ ++Y+  I+  CS G  ++A
Sbjct: 326 MRGKLYEALDLWKLMIQDG-----------------CEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
           LQ+ ++ ++ G   N +TY  L++G  K
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAK 396



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 23/294 (7%)

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
           A+   +     +Y  +I    R+ + +    +  +MK   I      +  +I G  + G 
Sbjct: 65  ANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGS 124

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            EQA+ M   + + G  P    +N ++    SE + +     +  M +    P++ T NI
Sbjct: 125 AEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNI 184

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL  LC+   ++ A K F     KG   D+VTY T++SSLCK  +++DA  L       +
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG-----R 239

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P    Y A+   + + GR+E A K    M++ G                 +DP+ +SY
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG-----------------VDPNVVSY 282

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           S  IN  C  G  + A  +F +   +G   N  T+  L+ G   R K + +A+D
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK-LYEALD 335



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 36/181 (19%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G GCLP+  TYN +LDALF+  K  E   L  +++ + L PN  TYN ++ G+ + G 
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 61  LKEAMRVV----------DLMTQNKSL--------------------------PDVWTYN 84
           + EA+++           D +T N  +                          PD+ TY 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            LI G CN   +EEA     +  +  + P+  T+N L+  FF+S   M    ++D++   
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659

Query: 145 G 145
           G
Sbjct: 660 G 660


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 258/537 (48%), Gaps = 30/537 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V++N+I+    K G ++  +     + K GLVP+  ++NIL++G C +G + EA+ +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M ++   PD  TYN+L  G+   GM+  A+ + ++M    L PDV+TY  L+    +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            G       L+ ++   G + N++   ++M+   CK G+ID+A  +   M+ +G SPD V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ +I   CK G  + A  + D M  K +  N+ T   +L  LC +  L EA  LL+S 
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G  LD V Y  +I GY +      AL+L+  + E  I PS  T+N++I+G  ++   
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L+ +   G+ P   ++ T++  + + G  +   +   +M  +   P  VT +++
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579

Query: 367 LSGLC------------REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             GLC            RE I EK  +  R    +G   D +TYNT+I  LC+ + L  A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           F  L  M+ + L     TY  +  +L   G + +A  F   + E                
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE---------------- 683

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            + +  S  +Y+  I  HC +G  + A+++F +   +G  ++   Y  ++N L +R 
Sbjct: 684 -QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 739



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 13/517 (2%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++L    +  K+ +V   + D        N  TY+ +V G C+   L++A+  +   
Sbjct: 161 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 213

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V ++N +++G+C  G ++ A      +    L+P V ++N LIN     G  
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +L  ++++HG++P++VT+NI+ K +   G I  A +++R+M + G SPD +TY  L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +   C+ GN++    ++  M  +G ++N+I   + +L  LC   ++DEA  L N     G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y  +I G  +  K + AL L+DEM +++I+P++ T+ A++ GL Q G   +A 
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+ L+ SG   D   +N +I G+   G +E+AL+    ++E    P + T N L+ G 
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A K      L G A   V+Y TL+ +       +    L  EM+ + + P  
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ I   L    + E         V   +I  +  Q       E I P  I+Y+  I 
Sbjct: 574 VTYSVIFKGLCRGWKHENCNH-----VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             C       A    E  + + +  + +TY  L++ L
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 216/449 (48%), Gaps = 13/449 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+VTYN +       G ++   +++ DM  +GL P+  TY IL+ G C+LG 
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +   + ++ D++++   L  +   +++++G C  G ++EA  L  +M++  L PD+V Y+
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I+   + G+   A  L DE+ +  I PN+ TH  ++   C++G + +A  ++ ++  +
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G + D V YN +ID   K+G +EEA  +  V+   G+  +  T N++++  C  + + EA
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L+     G     VSY TL+  Y          +L  EMK   I P+  TY+ +  G
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582

Query: 300 LSQSGKTEQAIDMLNELL------------QSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           L +  K E    +L E +              G+ PD+ T+NTII   C    +  A  F
Sbjct: 583 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 642

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M  ++      T NIL+  LC  G + KA  F  S   +  ++    Y TLI + C 
Sbjct: 643 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 702

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +   E A  L  ++  +        Y+A+
Sbjct: 703 KGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 12/375 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           + +L  L K G+++E   L + MK  GL P+   Y+I++ G CKLG    A+ + D M  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
            + LP+  T+  L+ G C  GML EA  L   + S     D+V YN +I+ + +SG   E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +L   + E GI P+  T N +I  YCK   I +A KI+  ++  G +P  V+Y TL+D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------C-----EKKLDEAYM 241
           A    GN +    +   M  +G+    +T + I   LC       C     E+  ++   
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            L      G   D+++Y T+I    R +  + A    + MK R +  S+ TYN +I  L 
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A   +  L +  +   +  + T+I   C +G  E A++  ++++ + F   I 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 362 TCNILLSGLCREGIL 376
             + +++ LCR  ++
Sbjct: 727 DYSAVINRLCRRHLM 741



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/479 (22%), Positives = 216/479 (45%), Gaps = 48/479 (10%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           VW  +ML+       M++++  + K+M+   L     +YN+++  F E+ +  + +K I 
Sbjct: 126 VW--DMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK 183

Query: 140 ELDEH----------------------------GIKPNAVTHNIMIKWYCKEGKIDKACK 171
           + +EH                             I P+ V+ N ++  YCK G +D A  
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
               + + G  P   ++N LI+  C  G++ EA  +   M + G++ +++T N +     
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI-MPST 290
               +  A+ ++     +G   D ++Y  L+ G  +    +  L L  +M  R   + S 
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
              + M+ GL ++G+ ++A+ + N++   G+ PD   ++ +IHG C  G+ + AL  +++
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M +K   P+  T   LL GLC++G+L +A     S I  G+ +D V YN +I    K   
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +E+A  L   + E  + P   T+ ++     ++  + EA+K   ++   G          
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG---------- 533

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  + PS +SY+  ++ + + G  K   ++  E + +GI     TY  +  GL +
Sbjct: 534 -------LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 47/313 (15%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP++ T+  +L  L +KG L E R LL  +   G   +   YNI++ GY K G ++EA+ 
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +  ++ +    P V T+N LI G+C    + EA ++   ++   L P VV+Y TL++ + 
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-----------IDKACKI-VR 174
             G +    +L  E+   GI P  VT++++ K  C+  K           I + CK  +R
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609

Query: 175 NMEENGFSPDCVTYNT-----------------------------------LIDANCKAG 199
           +ME  G  PD +TYNT                                   LID+ C  G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            + +A   +  +  + + ++     T++   C +   + A  L +    RG+ +    Y 
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729

Query: 260 TLITGYFRDEKAN 272
            +I    R    N
Sbjct: 730 AVINRLCRRHLMN 742



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 2/126 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TYNTI+  L +   L+     L  MK + L  +  TYNIL+   C  G+
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +++A   +  L  QN SL   + Y  LI   C  G  E A +L  ++        +  Y+
Sbjct: 671 IRKADSFIYSLQEQNVSLSK-FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729

Query: 120 TLINRF 125
            +INR 
Sbjct: 730 AVINRL 735


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 246/528 (46%), Gaps = 35/528 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P    Y  ++D   ++ K  E  ++L +M ++GL P   T   +++ YCK G 
Sbjct: 102 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 161

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+RV++LM      P+VWTYN L+ G+CN G + +A  L  +M +  + PD VTYN 
Sbjct: 162 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G    AF+L+  ++  G+  +  T+N +I   CK+G+ D+AC +  ++E  G
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+N+LI+  CK+G  + A++ ++ M   G   +T T ++ +  LC  K   E  
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    ++      V+Y  +I    ++       + W EM      P   TY   +   
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 401

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+  +A ++L E+ ++G+  D   +NT++ G  S GQ + A+    +M   +  P+ 
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  ILL  L R  ++E  L    + +   KA++                L D FGL   
Sbjct: 462 FTYFILLRHLVRMRLVEDVLPLTPAGVW--KAIE----------------LTDVFGLFDV 503

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M++ +  P+  TY++I     E GR EEA    S+M E                 + I  
Sbjct: 504 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE-----------------DSISL 546

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           +   Y+  +   C   RY DA  +     Q G      +Y +L++GLI
Sbjct: 547 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLI 594



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 255/569 (44%), Gaps = 39/569 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+N+++    +  +++  RDL   M  +G   +  +Y  L+ G C+ G + EA
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA------------------------F 100
           + +   M Q    PD+  Y  L+ G CNA   EE                         F
Sbjct: 65  VELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 101 RLR-----------KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           R R           +EM    L P VVT   +IN + + GR  +A ++++ +   G KPN
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
             T+N +++ +C EGK+ KA  ++  M   G +PD VTYN LI   C  G++E AFR++ 
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           +M   GL  +  T N +++ LC + + D+A  L +S   RG   + V++ +LI G  +  
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           KA+ A K  ++M      P T+TY++ I  L +   +++ +  + E+LQ  + P    + 
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 360

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +IH    E       +   +MV     PD+VT    +   C EG L +A          
Sbjct: 361 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 420

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G  VD++ YNTL+       + + A  +L +M      P+++TY  +   LV    +E+ 
Sbjct: 421 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 480

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
              T   V        V          E  P+S +YS  +      GR ++A  +    +
Sbjct: 481 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 540

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +  I++N+  Y  L+    K ++ +   V
Sbjct: 541 EDSISLNEDIYTALVTCFCKSKRYLDAWV 569



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 235/500 (47%), Gaps = 29/500 (5%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M + G  P+  T+N L+ GYC+   +  A  + D M       DV +Y  LI G C AG 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           ++EA  L  EM+     PD+  Y  L+     + R  E   ++  + E G +P+   +  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++ + C+E K  +A ++++ M E G +P  VT   +I+A CK G M +A R++++M  +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            K N  T N ++   C E K+ +A  LLN     G   D V+Y  LI G   D     A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L   M+   ++   +TYNA+I  L + G+T+QA  + + L   G+ P+  TFN++I+G 
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G+ + A +F  KMV     PD  T +  +  LC+    ++ L F    + K     +
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 396 VTYNTLISSLCKERRLEDAFGLLS----EMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           V Y  +I  L KER     +GL++    EM      PD  TY     A    GRL EA+ 
Sbjct: 357 VNYTIVIHKLLKERN----YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 412

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M + G                 +   +++Y+  ++ H S G+   A+ I ++    
Sbjct: 413 VLMEMSKNG-----------------VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 455

Query: 512 GIAINKSTYMNLMNGLIKRR 531
               N+ TY  L+  L++ R
Sbjct: 456 ASVPNQFTYFILLRHLVRMR 475



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 235/519 (45%), Gaps = 87/519 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VT   +++A  K+G++++   +L  MK +G  PN  TYN LV G+C  G + +A
Sbjct: 141 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 200

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +++ M      PD  TYN+LI G C  G +E AFRL + ME   L+ D  TYN LIN 
Sbjct: 201 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 260

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR+ +A  L D L+  GIKPNAVT N +I   CK GK D A K +  M   G +PD
Sbjct: 261 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 320

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-------------- 230
             TY++ I+  CK    +E    +  M +K +K +T+    ++H L              
Sbjct: 321 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWG 380

Query: 231 ---------------------CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                                C E +L+EA  +L   SK G  +D ++Y TL+ G+    
Sbjct: 381 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 440

Query: 270 KANRALK----------------------------------------------------L 277
           + + A+                                                     L
Sbjct: 441 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 500

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           +D MK+ + +P++ TY++++ G S+ G+TE+A  +++ + +  +  +E  +  ++  FC 
Sbjct: 501 FDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 560

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
             +   A      M++  F P +++   LLSGL  EG  +KA + F +   K  + D + 
Sbjct: 561 SKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV 620

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +  +I  L K+   + +  ++  +E     P   TYA +
Sbjct: 621 WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 659



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 21/323 (6%)

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M R G + +  T N+++   C   ++D A  L +    RG+  D VSY TLI G     +
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A++L+ EM +    P    Y A++ GL  + + E+ + ML  + + G  P    +  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++   C E + ++A +   +M EK   P +VTC  +++  C+EG +  AL+      L+G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              +  TYN L+   C E ++  A  LL++M    + PD  TY  +       G +E A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +   +M   G I  Q                  +Y+  IN  C  GR   A  +F+    
Sbjct: 237 RLLRLMEGDGLIADQY-----------------TYNALINALCKDGRTDQACSLFDSLET 279

Query: 511 KGIAINKSTYMNLMNGLIKRRKS 533
           +GI  N  T+ +L+NGL K  K+
Sbjct: 280 RGIKPNAVTFNSLINGLCKSGKA 302


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 235/493 (47%), Gaps = 41/493 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FGC P    YN +LDAL  + K   +  L ++MKK GL+PN  TYNIL+   CK   +  
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A ++   M+     PD  TY  +++  C AG +++A  L    +     P V  YN LI+
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALID 252

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + GR   A KL+ E+ ++G+ PN V+++ +I   C  G ++ A  +   M   G   
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  T+  LI      G + EA  +  +M + G + N +  NT++H LC    L+EA  + 
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   + G   +  +Y  LI G+ +      A + W+ M      P+  TY  M+  L ++
Sbjct: 373 DQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF---------------H 348
              +QA  ++ ++   G  P+  TFNT I G C  G+VE A++                +
Sbjct: 433 SMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492

Query: 349 NKMVEKSFK--------------------PDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N++++  F+                    P++VT N +L G  R G++ +AL+ F   ++
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE-KKLGPDRYTYAAIHTALVESGRLE 447
           +G A DS+TYNT+I + CK+ +++ A  L+  +   K+  PD  TY ++         +E
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 448 EAQKFTSIMVETG 460
           EA  F    +  G
Sbjct: 613 EAMAFLDKAINQG 625



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 249/515 (48%), Gaps = 23/515 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY  +++ L ++ +++ V+ +L  MK  G+      +  +++GY ++G  ++A+++   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    P V  YN L++   +    +    L   M+   L+P+V TYN L+    ++ R 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A KL  E+   G  P+AVT+  M+   CK GKID A ++        F P    YN L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNAL 250

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           ID  CK G +E A +++  M   G+  N ++ + I+++LC    ++ A+ L      RG 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  ++  LI G F   K   AL LW  M +    P+   YN +I GL  +G  E+A+ 
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + +++ +SG +P+ TT++ +I GF   G +  A +  N+M+    +P++VT   ++  LC
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +  + ++A        L+G   +++T+NT I  LC   R+E A  LL  M+     P+  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 432 TYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTP------------ 475
           TY  +  AL    + EEA    Q+  +  ++   + +  V    S+              
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 476 --EEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
                 P SI+Y+  I+ +C QG+ K A Q+ E  
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 224/444 (50%), Gaps = 6/444 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTY T++ +L K GK+++ R+L    K     P+   YN L+ G CK G 
Sbjct: 205 MSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGR 259

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A++++  M  N   P+V +Y+ +IN  C +G +E AF L  +M       ++ T+  
Sbjct: 260 IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP 319

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI   F  G+  EA  L   + + G +PN V +N +I   C  G +++A ++   M+ +G
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY+ LID   K+G++  A    + M   G + N +T   ++  LC     D+A 
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQAN 439

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   +  G   + +++ T I G   + +   A+KL + M+    +P+  TYN ++  L
Sbjct: 440 SLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K E+A  +  E+    + P+  T+NT+++GF   G + +ALQ   K + +   PD 
Sbjct: 500 FRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559

Query: 361 VTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +T N ++   C++G ++ A +   R   +K    D +TY +LI   C    +E+A   L 
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619

Query: 420 EMEEKKLGPDRYTYAAIHTALVES 443
           +   + + P+  T+ A+     +S
Sbjct: 620 KAINQGICPNFATWNALVRCFFDS 643



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 194/437 (44%), Gaps = 29/437 (6%)

Query: 117 TYNTLINRFFESGRSME---AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           TY  +I R    GR  E      ++ ++   GI         +I  Y + G  ++A K+ 
Sbjct: 76  TYRVMIERL---GRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             + E G  P    YN L+DA       +    +   M + GL  N  T N +L  LC  
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            ++D A+ L    S +G   D V+Y T+++   +  K + A +L    K     PS   Y
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVY 247

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           NA+I G+ + G+ E AI +L E++ +G+ P+  +++ II+  C  G VE A     +M  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +    +I T   L+ G    G L +AL  ++  I  G   + V YNTLI  LC    LE+
Sbjct: 308 RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV------ 467
           A  +  +M+     P+  TY+ +     +SG L  A +  + M+  G   + V       
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 468 ---------QPNT---SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                    Q N+     T E   P++++++  I   C  GR + A+++ E  +  G   
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 516 NKSTYMNLMNGLIKRRK 532
           N +TY  L++ L +  K
Sbjct: 488 NITTYNELLDALFRMNK 504



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 176/388 (45%), Gaps = 57/388 (14%)

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           + +  +  A T+ +MI+   +E ++D    I++ M+ +G +     +  +I+   + G+ 
Sbjct: 66  NSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSA 125

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E+A +M   +G  G K      N +L  L  E K    + ++N                 
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK----FQMINP---------------- 165

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
                          L+  MK+  ++P+ FTYN ++  L ++ + + A  +  E+   G 
Sbjct: 166 ---------------LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGC 210

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD  T+ T++   C  G+++ A +   +     FKP +   N L+ G+C+EG +E A+K
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                +  G   + V+Y+ +I+SLC    +E AF L ++M  +    + +T+  +     
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
             G+L EA     +M++ G                  +P+ ++Y+  I+  CS G  ++A
Sbjct: 326 MRGKLYEALDLWKLMIQDG-----------------CEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIK 529
           LQ+ ++ ++ G   N +TY  L++G  K
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAK 396



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 23/294 (7%)

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
           A+   +     +Y  +I    R+ + +    +  +MK   I      +  +I G  + G 
Sbjct: 65  ANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGS 124

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            EQA+ M   + + G  P    +N ++    SE + +     +  M +    P++ T NI
Sbjct: 125 AEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNI 184

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL  LC+   ++ A K F     KG   D+VTY T++SSLCK  +++DA  L       +
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG-----R 239

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P    Y A+   + + GR+E A K    M++ G                 +DP+ +SY
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG-----------------VDPNVVSY 282

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           S  IN  C  G  + A  +F +   +G   N  T+  L+ G   R K + +A+D
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK-LYEALD 335



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 36/181 (19%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G GCLP+  TYN +LDALF+  K  E   L  +++ + L PN  TYN ++ G+ + G 
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 61  LKEAMRVV----------DLMTQNKSL--------------------------PDVWTYN 84
           + EA+++           D +T N  +                          PD+ TY 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            LI G CN   +EEA     +  +  + P+  T+N L+  FF+S   M    ++D++   
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659

Query: 145 G 145
           G
Sbjct: 660 G 660


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 258/537 (48%), Gaps = 30/537 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V++N+I+    K G ++  +     + K GLVP+  ++NIL++G C +G + EA+ +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M ++   PD  TYN+L  G+   GM+  A+ + ++M    L PDV+TY  L+    +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            G       L+ ++   G + N++   ++M+   CK G+ID+A  +   M+ +G SPD V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ +I   CK G  + A  + D M  K +  N+ T   +L  LC +  L EA  LL+S 
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G  LD V Y  +I GY +      AL+L+  + E  I PS  T+N++I+G  ++   
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L+ +   G+ P   ++ T++  + + G  +   +   +M  +   P  VT +++
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579

Query: 367 LSGLC------------REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             GLC            RE I EK  +  R    +G   D +TYNT+I  LC+ + L  A
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           F  L  M+ + L     TY  +  +L   G + +A  F   + E                
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE---------------- 683

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            + +  S  +Y+  I  HC +G  + A+++F +   +G  ++   Y  ++N L +R 
Sbjct: 684 -QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 739



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 13/517 (2%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++L    +  K+ +V   + D        N  TY+ +V G C+   L++A+  +   
Sbjct: 161 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 213

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V ++N +++G+C  G ++ A      +    L+P V ++N LIN     G  
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +L  ++++HG++P++VT+NI+ K +   G I  A +++R+M + G SPD +TY  L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +   C+ GN++    ++  M  +G ++N+I   + +L  LC   ++DEA  L N     G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y  +I G  +  K + AL L+DEM +++I+P++ T+ A++ GL Q G   +A 
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+ L+ SG   D   +N +I G+   G +E+AL+    ++E    P + T N L+ G 
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A K      L G A   V+Y TL+ +       +    L  EM+ + + P  
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ I   L    + E         V   +I  +  Q       E I P  I+Y+  I 
Sbjct: 574 VTYSVIFKGLCRGWKHENCNH-----VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             C       A    E  + + +  + +TY  L++ L
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 216/449 (48%), Gaps = 13/449 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+VTYN +       G ++   +++ DM  +GL P+  TY IL+ G C+LG 
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +   + ++ D++++   L  +   +++++G C  G ++EA  L  +M++  L PD+V Y+
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I+   + G+   A  L DE+ +  I PN+ TH  ++   C++G + +A  ++ ++  +
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G + D V YN +ID   K+G +EEA  +  V+   G+  +  T N++++  C  + + EA
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L+     G     VSY TL+  Y          +L  EMK   I P+  TY+ +  G
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582

Query: 300 LSQSGKTEQAIDMLNELL------------QSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           L +  K E    +L E +              G+ PD+ T+NTII   C    +  A  F
Sbjct: 583 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 642

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M  ++      T NIL+  LC  G + KA  F  S   +  ++    Y TLI + C 
Sbjct: 643 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 702

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +   E A  L  ++  +        Y+A+
Sbjct: 703 KGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 12/375 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           + +L  L K G+++E   L + MK  GL P+   Y+I++ G CKLG    A+ + D M  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
            + LP+  T+  L+ G C  GML EA  L   + S     D+V YN +I+ + +SG   E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +L   + E GI P+  T N +I  YCK   I +A KI+  ++  G +P  V+Y TL+D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------C-----EKKLDEAYM 241
           A    GN +    +   M  +G+    +T + I   LC       C     E+  ++   
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            L      G   D+++Y T+I    R +  + A    + MK R +  S+ TYN +I  L 
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A   +  L +  +   +  + T+I   C +G  E A++  ++++ + F   I 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 362 TCNILLSGLCREGIL 376
             + +++ LCR  ++
Sbjct: 727 DYSAVINRLCRRHLM 741



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/503 (22%), Positives = 224/503 (44%), Gaps = 51/503 (10%)

Query: 61  LKEAMRVVDLMTQNKSLPDVW-----TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
            KE   +++ + Q +     W      ++ML+       M++++  + K+M+   L    
Sbjct: 100 FKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVST 159

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEH----------------------------GIK 147
            +YN+++  F E+ +  + +K I + +EH                             I 
Sbjct: 160 QSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG 219

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+ V+ N ++  YCK G +D A      + + G  P   ++N LI+  C  G++ EA  +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
              M + G++ +++T N +         +  A+ ++     +G   D ++Y  L+ G  +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339

Query: 268 DEKANRALKLWDEMKERQI-MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
               +  L L  +M  R   + S    + M+ GL ++G+ ++A+ + N++   G+ PD  
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            ++ +IHG C  G+ + AL  +++M +K   P+  T   LL GLC++G+L +A     S 
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           I  G+ +D V YN +I    K   +E+A  L   + E  + P   T+ ++     ++  +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
            EA+K   ++   G                 + PS +SY+  ++ + + G  K   ++  
Sbjct: 520 AEARKILDVIKLYG-----------------LAPSVVSYTTLMDAYANCGNTKSIDELRR 562

Query: 507 ETRQKGIAINKSTYMNLMNGLIK 529
           E + +GI     TY  +  GL +
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCR 585



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 47/313 (15%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP++ T+  +L  L +KG L E R LL  +   G   +   YNI++ GY K G ++EA+ 
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +  ++ +    P V T+N LI G+C    + EA ++   ++   L P VV+Y TL++ + 
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK-----------IDKACKI-VR 174
             G +    +L  E+   GI P  VT++++ K  C+  K           I + CK  +R
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609

Query: 175 NMEENGFSPDCVTYNT-----------------------------------LIDANCKAG 199
           +ME  G  PD +TYNT                                   LID+ C  G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            + +A   +  +  + + ++     T++   C +   + A  L +    RG+ +    Y 
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729

Query: 260 TLITGYFRDEKAN 272
            +I    R    N
Sbjct: 730 AVINRLCRRHLMN 742



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 2/126 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TYNTI+  L +   L+     L  MK + L  +  TYNIL+   C  G+
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +++A   +  L  QN SL   + Y  LI   C  G  E A +L  ++        +  Y+
Sbjct: 671 IRKADSFIYSLQEQNVSLSK-FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729

Query: 120 TLINRF 125
            +INR 
Sbjct: 730 AVINRL 735


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 270/536 (50%), Gaps = 14/536 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    Y   + A  K   + +  +L + MK   + P+   YN+L+ G CK   + +A ++
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M   + LP + TYN LI+G+C AG  E++F++R+ M++  + P ++T+NTL+   F+
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   +A  ++ E+ + G  P+A T +I+   Y    K + A  +     ++G   +  T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            + L++A CK G +E+A  ++     KGL  N +  NT++   C +  L  A M + +  
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K+G   D ++Y  LI  +    +   A K  ++MK + + PS  TYN +I G  +  + +
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +  D+L E+  +G +P+  ++ T+I+  C   ++ +A      M ++   P +   N+L+
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C +G +E A +F +  + KG  ++ VTYNTLI  L    +L +A  LL E+  K L 
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-----KINHQVVQPNTSKTPE------ 476
           PD +TY ++ +    +G ++        M  +G     K  H ++   T +  E      
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLF 656

Query: 477 ---EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               + P  + Y+  ++ +   G  + A  + ++  +K I ++K+TY +L+ G +K
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 225/450 (50%), Gaps = 37/450 (8%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T + +L+AL K+GK+ +  ++L     +GLVPN   YN ++ GYC+ G L  A   ++ M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +    PD   YN LI  +C  G +E A +   +M+   + P V TYN LI  +   GR 
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY---GRK 472

Query: 132 ME---AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            E    F ++ E++++G  PN V++  +I   CK  K+ +A  + R+ME+ G SP    Y
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LID  C  G +E+AFR    M +KG+++N +T NT++  L    KL EA  LL   S+
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK-------------------------- 282
           +G   D  +Y +LI+GY       R + L++EMK                          
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELT 652

Query: 283 -----ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
                E  + P    YN ++   +  G  E+A ++  ++++  +  D+TT+N++I G   
Sbjct: 653 ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G++ +     ++M  +  +P+  T NI++ G C       A  ++R    KG  +D   
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCI 772

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            N L+S L +E R ++A  ++SEM  + LG
Sbjct: 773 GNELVSGLKEEWRSKEAEIVISEMNGRMLG 802



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 225/464 (48%), Gaps = 39/464 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY------------ 55
           P  +T+NT+L  LFK G + +  ++L +MK  G VP+  T++IL  GY            
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341

Query: 56  -----------------------CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
                                  CK G +++A  ++        +P+   YN +I+G+C 
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G L  A    + ME   + PD + YN LI RF E G    A K ++++   G+ P+  T
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET 461

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +NI+I  Y ++ + DK   I++ ME+NG  P+ V+Y TLI+  CK   + EA  +   M 
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G+       N ++   C + K+++A+       K+G  L+ V+Y TLI G     K +
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  L  E+  + + P  FTYN++I G   +G  ++ I +  E+ +SG+ P   T++ +I
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
              C++  +E   +   +M   S KPD++  N +L      G +EKA    +  I K   
Sbjct: 642 -SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +D  TYN+LI    K  +L +   L+ EM  +++ P+  TY  I
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/530 (24%), Positives = 238/530 (44%), Gaps = 21/530 (3%)

Query: 16  ILDALFKKGKL-NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQN 74
           +L  L  + K+ +E  DL   ++ +G+ P+  +  +L+    K    +  + V   + ++
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
              P  + Y   I        + +   L   M+  ++ P V  YN LI+   +  R  +A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            +L DE+    + P+ +T+N +I  YCK G  +K+ K+   M+ +   P  +T+NTL+  
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
             KAG +E+A  ++  M   G   +  T + +       +K + A  +  +A   G  ++
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +   L+    ++ K  +A ++      + ++P+   YN MI G  + G    A   + 
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            + + GM PD   +N +I  FC  G++E A +  NKM  K   P + T NIL+ G  R+ 
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKY 473

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
             +K     +     G   + V+Y TLI+ LCK  +L +A  +  +ME++ + P    Y 
Sbjct: 474 EFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYN 533

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN--------TSKTPEEID------- 479
            +       G++E+A +F+  M++ G I   +V  N        T K  E  D       
Sbjct: 534 MLIDGCCSKGKIEDAFRFSKEMLKKG-IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592

Query: 480 ----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
               P   +Y+  I+ +   G  +  + ++EE ++ GI     TY  L++
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 31/215 (14%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL--------- 61
           VTYNT++D L   GKL+E  DLL ++ ++GL P+  TYN L+SGY   G +         
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624

Query: 62  ---------------------KEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEA 99
                                KE + + + +    SL PD+  YN +++ +   G +E+A
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           F L+K+M    +  D  TYN+LI    + G+  E   LIDE++   ++P A T+NI++K 
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
           +C+      A    R M+E GF  D    N L+  
Sbjct: 745 HCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD + YN +L      G + +  +L   M ++ +  ++TTYN L+ G  K+G L E   +
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M   +  P+  TYN+++ G C       A+   +EM+    L DV   N L++   E
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782

Query: 128 SGRSMEAFKLIDELD 142
             RS EA  +I E++
Sbjct: 783 EWRSKEAEIVISEMN 797


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 261/571 (45%), Gaps = 33/571 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C P    YN +   L  +G +     L + M   G +PN TTY +L+ G CK G 
Sbjct: 170 MGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGM 229

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+++ D M +   +PDV  Y +L++  CN G +E+A RL   M+     PD VTY  
Sbjct: 230 AVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTV 289

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            ++   ++GR  EAF   + L + G     + ++ +I    + G+ D+       M    
Sbjct: 290 FLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKS 349

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD   Y  LI    +AG  ++AF ++D M  KG   +T   NT+L  L     +D A 
Sbjct: 350 ISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQ 409

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   +    LD  ++  +I G  +    ++A++++DEM E    P+  TYNA+I GL
Sbjct: 410 SLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGL 469

Query: 301 SQSGKTEQAIDMLNEL-------------LQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            ++G  E+A  + +++             L +  + D  +   ++ G C  GQV KA + 
Sbjct: 470 YRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKL 529

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              ++E    PD+VT N L++GLC+   L+ AL+ F+   LKG + D +TY TLI  L +
Sbjct: 530 LRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWR 589

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA---------QKFT----- 453
             R  DA  L   +      P    Y  +  +L    +L +A         +K+      
Sbjct: 590 AHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPED 649

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSIS-----YSEKINEHCSQGRYKDALQIFEET 508
            ++    K         T K   +ID    S     Y+  +   C   +  DAL+IF   
Sbjct: 650 EVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHIL 709

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            + GI +  +    L+N L   R +++ AVD
Sbjct: 710 EEFGIVVTPACCALLINYLCWDR-NLNAAVD 739



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 216/478 (45%), Gaps = 48/478 (10%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D L+D +  GL      +  LV  +   G  +EA+     M      P  + YN +    
Sbjct: 130 DALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVL 189

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
            + G++  A  L   M S   LP+  TY  L++   + G +++A K+ DE+ E GI P+ 
Sbjct: 190 VDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDV 249

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
             + +++   C EG+I+ A +++ +M+ENG  PD VTY   +   CKAG ++EAF   ++
Sbjct: 250 KIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFEL 309

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +   G  +  I  + ++  L    + DE          +    D   Y  LI  +    +
Sbjct: 310 LQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGR 369

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A  L DEMK++  +P TF YN ++  L   G  ++A  +++E+LQ+ ++ D TT N 
Sbjct: 370 TKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNI 429

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE------------- 377
           +I G C +G ++KA+Q  ++M E    P ++T N L+ GL R G+LE             
Sbjct: 430 MICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGN 489

Query: 378 -----------------------------------KALKFFRSWILKGKAVDSVTYNTLI 402
                                              KA K  R  I  G   D VTYNTLI
Sbjct: 490 NPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLI 549

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           + LCK + L+ A  L  E++ K + PD  TY  +   L  + R  +A      ++ +G
Sbjct: 550 NGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSG 607



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 221/506 (43%), Gaps = 84/506 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD   Y  +L +L  +G++ +   LL  MK+ G  P+  TY + +SG CK G + EA
Sbjct: 244 GIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEA 303

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               +L+        +  Y+ LI+G   AG  +E      EM    + PD+  Y  LI R
Sbjct: 304 FHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRR 363

Query: 125 FFESGRSMEAFKLIDELDEHGIKPN----------------------------------- 149
           F E+GR+ +AF L+DE+ + G  P+                                   
Sbjct: 364 FAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLD 423

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA---FR 206
           + THNIMI   CK+G IDKA ++   M E+G  P  +TYN LID   +AG +EEA   F 
Sbjct: 424 STTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFH 483

Query: 207 MMDVMGRKGLKM----------NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
            M++     L +          +T +L  ++  +C   ++ +AY LL    + G   D V
Sbjct: 484 KMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVV 543

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y TLI G  + +  + AL+L+ E++ + I P   TY  +I GL ++ +   A  +   +
Sbjct: 544 TYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNI 603

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQ-----------------------------F 347
           L+SG  P    +NT++   C   ++ +A+                              F
Sbjct: 604 LRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGF 663

Query: 348 HNKMVEKSFKPDIV-------TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
            ++ V++  K D V          I + GLC+   ++ AL+ F      G  V       
Sbjct: 664 LDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCAL 723

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKL 426
           LI+ LC +R L  A  ++     K+ 
Sbjct: 724 LINYLCWDRNLNAAVDIMMYTLSKRF 749



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 9/255 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTYNT+++ L K   L+    L  +++ +G+ P+  TY  L+ G  +     +A
Sbjct: 537 GVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDA 596

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK--LLP-DVVTYNTL 121
             +   + ++   P +  YN ++   C    L +A  L  +    K  L P D V  N  
Sbjct: 597 TMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANA- 655

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
             + FE G   E  K + ++D+     N   + I +   C+  KID A +I   +EE G 
Sbjct: 656 -RKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGI 714

Query: 182 --SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +P C     LI+  C   N+  A  +M     K   ++    N +L +LC   +  +A
Sbjct: 715 VVTPACCA--LLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDA 772

Query: 240 YMLLNSASKRGYYLD 254
             L       GY +D
Sbjct: 773 QALSWRMHLVGYDMD 787


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 224/428 (52%), Gaps = 2/428 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++      G+L     LL DM  +G+ PN T Y  +V+  C  G + +A+ V
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M  +K + D   Y  +++G+CN G L  A R   EM+   L  D VTY TLIN    
Sbjct: 352 VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   EA K++ E+    +  + VT+ +++  YCK GK+ +A ++   M + G +P+ VT
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L D  CK G+++ A  ++  M  KGL++N  T N++++ LC    LD+A   +    
Sbjct: 472 YTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMD 531

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D  +Y TLI    +  + +RA  L  EM +  I P+  TYN ++ G   SG+ E
Sbjct: 532 AAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVE 591

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+  + P+ TT+N+++  +C    ++   + +  M  ++ +P+  T NIL+
Sbjct: 592 GGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILI 651

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   +++A  F    I KG  + + +Y+ LI  L K+++  +A  L  +M ++   
Sbjct: 652 KGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFT 711

Query: 428 --PDRYTY 433
             PD Y +
Sbjct: 712 AEPDVYNF 719



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 238/462 (51%), Gaps = 5/462 (1%)

Query: 1   MEGFGCLPD-NV-TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           +E F  LPD NV +YN +L  L   G++ + R L  +M      P+  TY IL+ GYC L
Sbjct: 251 IELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCAL 307

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L+ A++++D M      P+   Y  ++   C+ G + +A  + ++M   K++ D   Y
Sbjct: 308 GELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVY 367

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            T+++ F   G  + A +  DE+   G+  + VT+  +I   C+ G++ +A K+++ M  
Sbjct: 368 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
                D VTY  L+D  CK G M EAF++ + M ++G+  N +T   +   LC +  +  
Sbjct: 428 RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQA 487

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  LL+  S +G  L+  +Y +LI G  +    ++A++   +M    + P  +TY  +I 
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLID 547

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L +SG+ ++A D+L E+L +G+ P   T+N +++GFC  G+VE   +    M+EK+  P
Sbjct: 548 ALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHP 607

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +  T N L+   C    ++   + ++    +    +  TYN LI   CK R +++A    
Sbjct: 608 NATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFH 667

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +EM EK       +Y+A+   L +  +  EA+K    M + G
Sbjct: 668 NEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 208/439 (47%), Gaps = 56/439 (12%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N  ++NI++K  C  G+++ A ++    +E    PD VTY  LI   C  G +E A +++
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQL---FDEMASPPDVVTYGILIHGYCALGELENAVKLL 317

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D M  +G++ N     +++  LC + ++ +A  ++         LDE  Y T+++G+   
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A + +DEM+ + +     TY  +I GL ++G+ ++A  +L E+L   +  DE T+
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
             ++ G+C  G++ +A Q HN MV++   P++VT   L  GLC++G ++ A +       
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG  +++ TYN+LI+ LCK   L+ A   +++M+   L PD YTY  +  AL +SG L+ 
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 449 AQKFTSIMVETGK----INHQV-------------------------VQPNTS------- 472
           A      M++ G     + + V                         + PN +       
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMK 617

Query: 473 --------KTPEEI---------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                   K+  EI         +P+  +Y+  I  HC     K+A     E  +KG  +
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRL 677

Query: 516 NKSTYMNLMNGLIKRRKSI 534
             S+Y  L+  L K++K +
Sbjct: 678 TASSYSALIRLLNKKKKFV 696



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 181/356 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VTY T+++ L + G+L E   +L +M  + L  +  TY +LV GYCK G 
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGK 449

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +V + M Q    P+V TY  L +G C  G ++ A  L  EM +  L  +  TYN+
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   ++G   +A + + ++D  G+KP+  T+  +I   CK G++D+A  +++ M +NG
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYN L++  C +G +E   ++++ M  K +  N  T N+++   C    +    
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTT 629

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      R    +E +Y  LI G+ +      A    +EM E+    +  +Y+A+I  L
Sbjct: 630 EIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           ++  K  +A  + +++ + G   +   +N  I    +E  +E  L   +++VE S 
Sbjct: 690 NKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 148/285 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY  + D L K+G +    +LL +M  +GL  N  TYN L++G CK G+L +A
Sbjct: 464 GVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQA 523

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           MR +  M      PDV+TY  LI+  C +G L+ A  L +EM    + P +VTYN L+N 
Sbjct: 524 MRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNG 583

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SGR     KL++ + E  I PNA T+N ++K YC    +    +I + M      P+
Sbjct: 584 FCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPN 643

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI  +CKA +M+EA    + M  KG ++   + + ++  L  +KK  EA  L +
Sbjct: 644 ENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFH 703

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
              K G+  +   Y   I   F ++     L L DE+ E  I+ S
Sbjct: 704 DMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIVKS 748



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 163/315 (51%), Gaps = 2/315 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D VTY  ++D   K+GK+ E   + + M ++G+ PN  TY  L  G CK G ++ A  ++
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492

Query: 69  DLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             M+ NK L  +  TYN LING C AG L++A R   +M++  L PDV TY TLI+   +
Sbjct: 493 HEMS-NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCK 551

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG    A  L+ E+ ++GIKP  VT+N+++  +C  G+++   K++  M E    P+  T
Sbjct: 552 SGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATT 611

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+L+   C   NM+    +   M  + ++ N  T N ++   C  + + EA    N   
Sbjct: 612 YNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMI 671

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G+ L   SY  LI    + +K   A KL+ +M++         YN  I         E
Sbjct: 672 EKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLE 731

Query: 308 QAIDMLNELLQSGMI 322
             + + +EL+++ ++
Sbjct: 732 ATLALCDELVEASIV 746



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 145/315 (46%), Gaps = 28/315 (8%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+  +    N +L  L     LDEA  L      +    +  SY  L+       +   A
Sbjct: 230 GISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLKVLCGAGRVEDA 281

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            +L+DEM      P   TY  +I G    G+ E A+ +L++++  G+ P+ T + +++  
Sbjct: 282 RQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C +G+V  AL     MV      D      +LSG C +G L  A ++F     KG A D
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 398

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTY TLI+ LC+   L++A  +L EM  ++L  D  TY  +     + G++ EA +  +
Sbjct: 399 GVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            MV+ G                 + P+ ++Y+   +  C QG  + A ++  E   KG+ 
Sbjct: 459 TMVQRG-----------------VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501

Query: 515 INKSTYMNLMNGLIK 529
           +N  TY +L+NGL K
Sbjct: 502 LNACTYNSLINGLCK 516



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 123/259 (47%), Gaps = 24/259 (9%)

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           + A++L+  + ++ +     +YN ++  L  +G+ E A  + +E+      PD  T+  +
Sbjct: 248 DEAIELFQGLPDKNVC----SYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGIL 300

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           IHG+C+ G++E A++  + MV +  +P+      +++ LC +G +  AL      +    
Sbjct: 301 IHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKV 360

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            +D   Y T++S  C +  L  A     EM+ K L  D  TY  +   L  +G L+EA+K
Sbjct: 361 ILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEK 420

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M+                    +D   ++Y+  ++ +C +G+  +A Q+     Q+
Sbjct: 421 VLQEMLA-----------------RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQR 463

Query: 512 GIAINKSTYMNLMNGLIKR 530
           G+A N  TY  L +GL K+
Sbjct: 464 GVAPNVVTYTALSDGLCKQ 482



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 32/258 (12%)

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET--TFNTIIHG 334
           L   +++  I PS    NA++  L         +D   EL Q   +PD+   ++N ++  
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLP--------LDEAIELFQG--LPDKNVCSYNILLKV 271

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C  G+VE A Q  ++M      PD+VT  IL+ G C  G LE A+K     + +G   +
Sbjct: 272 LCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPN 328

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +  Y ++++ LC + R+ DA  ++ +M   K+  D   Y  + +     G L  A+++  
Sbjct: 329 ATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFD 388

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M   G                 +    ++Y+  IN  C  G  K+A ++ +E   + + 
Sbjct: 389 EMQRKG-----------------LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLD 431

Query: 515 INKSTYMNLMNGLIKRRK 532
           +++ TY  L++G  KR K
Sbjct: 432 VDEVTYTVLVDGYCKRGK 449



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 35/212 (16%)

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D  +F+ ++    S   + +  Q+          P    CN +LS L     L++A++ F
Sbjct: 206 DPASFDLLLLCLPSAPLLRRVRQY-------GISPSPEACNAVLSRL----PLDEAIELF 254

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +   L  K V   +YN L+  LC   R+EDA  L  EM      PD  TY  +       
Sbjct: 255 QG--LPDKNV--CSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCAL 307

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G LE A K    MV  G                 ++P++  Y+  +   C +GR  DAL 
Sbjct: 308 GELENAVKLLDDMVARG-----------------VEPNATVYTSVVALLCDKGRVSDALT 350

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           + E+     + ++++ Y  +++G   +   +S
Sbjct: 351 VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVS 382


>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 223/466 (47%), Gaps = 26/466 (5%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P    YN ++DAL K   L+        M     VP+R TYNIL+ G C+LG + E
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M      P+V+TY +LI+G+ NA    E F++ + M+   ++P+  T  +L++
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVH 342

Query: 124 RFFESGRSMEAFKLIDELDE--HGI------------------------KPNAVTHNIMI 157
             F      +AF+L+ E  E   GI                         P++ T NI +
Sbjct: 343 GVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNITL 402

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
               K+  +   C +  N  ++G  P   TY TLI+A  KAG ME   R MD +   GL 
Sbjct: 403 ACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLI 462

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N  + N ++  LC  K +D A  +      RG   + V+Y TLI G+ R+   ++A +L
Sbjct: 463 SNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQEL 522

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            + + E +  P  FT+N++I GL Q+ K E A     E+++  + P+  T+N +I  FC+
Sbjct: 523 LEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCA 582

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G V ++     +M     +PD  + N L+ G   +   +KA K F S +  G   D+ T
Sbjct: 583 IGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYT 642

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           Y  LI SLCK  R + A  +   M+E    PD YT +     L  S
Sbjct: 643 YGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAHS 688



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 220/518 (42%), Gaps = 49/518 (9%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLG---WLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
           DLL  +K+ GL        IL   + +LG   +  E    + L+  N   P    YN ++
Sbjct: 180 DLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLN---PTTRLYNAVM 236

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +    +  L+ A+   ++M S   +PD  TYN LI+     G   EA +L+ +++  G  
Sbjct: 237 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 296

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           PN  T+ I+I  +    +  +  K+++ M+E    P+  T  +L+    +    ++AF +
Sbjct: 297 PNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFEL 356

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV----------- 256
           +     +   +  +  + IL+ L       EA M   S+S     L  V           
Sbjct: 357 LLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNITLACVLKKLDLKVTCT 416

Query: 257 ---------------SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
                          +Y TLI   ++  K     +  D +    ++ + ++YN +I  L 
Sbjct: 417 VFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLC 476

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +    ++A +M  +L   G+ P+  T+NT+I GFC  G ++KA +    ++E  F+PDI 
Sbjct: 477 KGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIF 536

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+ GLC+    E A   F   +      + +TYN LI S C    +  +  LL +M
Sbjct: 537 TFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQM 596

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           +   + PD +++ A+        R ++A+K    M+  G                 I P 
Sbjct: 597 KLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLG-----------------IQPD 639

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           + +Y   I   C  GR+  A +IF   ++ G   +  T
Sbjct: 640 NYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYT 677



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/518 (22%), Positives = 219/518 (42%), Gaps = 46/518 (8%)

Query: 41  LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNML---INGWCNAGMLE 97
           LV  +    +LV    + G  +  +  VDL+ Q K      T  +L      W   G+  
Sbjct: 152 LVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLAN 211

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
               +  ++  L L P    YN +++   +S     A+    ++  H   P+  T+NI+I
Sbjct: 212 YCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILI 271

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              C+ G +D+A ++++ ME  G+ P+  TY  LID    A    E F+++  M  + + 
Sbjct: 272 HGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVV 331

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL-- 275
            N  T+ +++H +      D+A+ LL    +R   + ++    ++     +  A+ A+  
Sbjct: 332 PNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMF 391

Query: 276 ------------------------KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
                                    ++D   +  + P   TY  +I  L ++GK E    
Sbjct: 392 XPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNR 451

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
            ++ L+  G+I +  ++N +I   C    +++A +    +  +   P+IVT N L+ G C
Sbjct: 452 YMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFC 511

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R G ++KA +     +      D  T+N+LI  LC+  + E+AFG  +EM E  + P+  
Sbjct: 512 RNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVI 571

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +  +    G +  +      M   G                 I P + S++  I  
Sbjct: 572 TYNILICSFCAIGDVSRSTHLLRQMKLHG-----------------IQPDTFSFNALIQG 614

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  + R++ A ++F+   + GI  +  TY  L+  L K
Sbjct: 615 YTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCK 652



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 166/396 (41%), Gaps = 26/396 (6%)

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L+ ++ E G+K       I+   + + G  +   ++   +   G +P    YN ++DA  
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           K+ +++ A+     M       +  T N ++H +C    +DEA  L+      GY+ +  
Sbjct: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  LI G+F  ++A    K+   MKER ++P+  T  +++ G+ +    ++A ++L E 
Sbjct: 301 TYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEF 360

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           ++      +   + I++   +     +A+ F          P   T NI L+ + ++  L
Sbjct: 361 VERKQGITQLVCDNILYCLSNNSMASEAVMF---------XPSSSTFNITLACVLKKLDL 411

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +     F + +  G      TY TLI +L K  ++E     +  +    L  + Y+Y  +
Sbjct: 412 KVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMV 471

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L +   ++ A +    +   G                 I P+ ++Y+  I   C  G
Sbjct: 472 IDCLCKGKSMDRASEMFRDLHNRG-----------------ISPNIVTYNTLIGGFCRNG 514

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               A ++ E   +     +  T+ +L++GL +  K
Sbjct: 515 NMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHK 550


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 258/537 (48%), Gaps = 30/537 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V++N+I+    K G ++  +     + K GLVP+  ++NIL++G C +G + EA+ +
Sbjct: 233 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 292

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M ++   PD  TYN+L  G+   GM+  A+ + ++M    L PDV+TY  L+    +
Sbjct: 293 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 352

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            G       L+ ++   G + N++   ++M+   CK G+ID+A  +   M+ +G SPD V
Sbjct: 353 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 412

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ +I   CK G  + A  + D M  K +  N+ T   +L  LC +  L EA  LL+S 
Sbjct: 413 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 472

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G  LD V Y  +I GY +      AL+L+  + E  I PS  T+N++I+G  ++   
Sbjct: 473 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 532

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L+ +   G+ P   ++ T++  + + G  +   +   +M  +   P  VT +++
Sbjct: 533 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 592

Query: 367 LSGLC------------REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             GLC            RE I EK  +  R    +G   D +TYNT+I  LC+ + L  A
Sbjct: 593 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 652

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           F  L  M+ + L     TY  +  +L   G + +A  F   + E                
Sbjct: 653 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE---------------- 696

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            + +  S  +Y+  I  HC +G  + A+++F +   +G  ++   Y  ++N L +R 
Sbjct: 697 -QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 752



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 13/517 (2%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++L    +  K+ +V   + D        N  TY+ +V G C+   L++A+  +   
Sbjct: 174 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 226

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V ++N +++G+C  G ++ A      +    L+P V ++N LIN     G  
Sbjct: 227 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 286

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +L  ++++HG++P++VT+NI+ K +   G I  A +++R+M + G SPD +TY  L
Sbjct: 287 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 346

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +   C+ GN++    ++  M  +G ++N+I   + +L  LC   ++DEA  L N     G
Sbjct: 347 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 406

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y  +I G  +  K + AL L+DEM +++I+P++ T+ A++ GL Q G   +A 
Sbjct: 407 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 466

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+ L+ SG   D   +N +I G+   G +E+AL+    ++E    P + T N L+ G 
Sbjct: 467 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 526

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A K      L G A   V+Y TL+ +       +    L  EM+ + + P  
Sbjct: 527 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 586

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ I   L    + E         V   +I  +  Q       E I P  I+Y+  I 
Sbjct: 587 VTYSVIFKGLCRGWKHENCNH-----VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 641

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             C       A    E  + + +  + +TY  L++ L
Sbjct: 642 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 678



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 226/473 (47%), Gaps = 13/473 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+VTYN +       G ++   +++ DM  +GL P+  TY IL+ G C+LG 
Sbjct: 296 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 355

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +   + ++ D++++   L  +   +++++G C  G ++EA  L  +M++  L PD+V Y+
Sbjct: 356 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 415

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I+   + G+   A  L DE+ +  I PN+ TH  ++   C++G + +A  ++ ++  +
Sbjct: 416 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 475

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G + D V YN +ID   K+G +EEA  +  V+   G+  +  T N++++  C  + + EA
Sbjct: 476 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 535

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L+     G     VSY TL+  Y          +L  EMK   I P+  TY+ +  G
Sbjct: 536 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 595

Query: 300 LSQSGKTEQAIDMLNELL------------QSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           L +  K E    +L E +              G+ PD+ T+NTII   C    +  A  F
Sbjct: 596 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 655

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M  ++      T NIL+  LC  G + KA  F  S   +  ++    Y TLI + C 
Sbjct: 656 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 715

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +   E A  L  ++  +        Y+A+   L     + E++ F  +M+  G
Sbjct: 716 KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQG 768



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 12/393 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           + +L  L K G+++E   L + MK  GL P+   Y+I++ G CKLG    A+ + D M  
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
            + LP+  T+  L+ G C  GML EA  L   + S     D+V YN +I+ + +SG   E
Sbjct: 440 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 499

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +L   + E GI P+  T N +I  YCK   I +A KI+  ++  G +P  V+Y TL+D
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 559

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------C-----EKKLDEAYM 241
           A    GN +    +   M  +G+    +T + I   LC       C     E+  ++   
Sbjct: 560 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 619

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            L      G   D+++Y T+I    R +  + A    + MK R +  S+ TYN +I  L 
Sbjct: 620 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 679

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A   +  L +  +   +  + T+I   C +G  E A++  ++++ + F   I 
Sbjct: 680 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 739

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
             + +++ LCR  ++ ++  FF   + +G + D
Sbjct: 740 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 228/506 (45%), Gaps = 66/506 (13%)

Query: 64  AMRVVDLMTQN----KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           A R+ +L++ +    +S   VW  +ML+       M++++  + K+M+   L     +YN
Sbjct: 119 ASRLCELLSNSFRKWESTGLVW--DMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYN 176

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +++  F E+ +  + +K I + +EH       T++ ++   C++ K++ A   +R  E  
Sbjct: 177 SVLYHFRETDKMWDVYKEIKDKNEH-------TYSTVVDGLCRQQKLEDAVLFLRTSEWK 229

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P  V++N+++   CK G ++ A      + + GL  +  + N +++ LC    + EA
Sbjct: 230 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 289

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY------ 293
             L +  +K G   D V+Y  L  G+      + A ++  +M ++ + P   TY      
Sbjct: 290 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 349

Query: 294 ------------------------------NAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
                                         + M+ GL ++G+ ++A+ + N++   G+ P
Sbjct: 350 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 409

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D   ++ +IHG C  G+ + AL  +++M +K   P+  T   LL GLC++G+L +A    
Sbjct: 410 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 469

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            S I  G+ +D V YN +I    K   +E+A  L   + E  + P   T+ ++     ++
Sbjct: 470 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 529

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
             + EA+K   ++   G                 + PS +SY+  ++ + + G  K   +
Sbjct: 530 QNIAEARKILDVIKLYG-----------------LAPSVVSYTTLMDAYANCGNTKSIDE 572

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           +  E + +GI     TY  +  GL +
Sbjct: 573 LRREMKAEGIPPTNVTYSVIFKGLCR 598


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 258/537 (48%), Gaps = 30/537 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V++N+I+    K G ++  +     + K GLVP+  ++NIL++G C +G + EA+ +
Sbjct: 262 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 321

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M ++   PD  TYN+L  G+   GM+  A+ + ++M    L PDV+TY  L+    +
Sbjct: 322 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 381

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            G       L+ ++   G + N++   ++M+   CK G+ID+A  +   M+ +G SPD V
Sbjct: 382 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+ +I   CK G  + A  + D M  K +  N+ T   +L  LC +  L EA  LL+S 
Sbjct: 442 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G  LD V Y  +I GY +      AL+L+  + E  I PS  T+N++I+G  ++   
Sbjct: 502 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 561

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  +L+ +   G+ P   ++ T++  + + G  +   +   +M  +   P  VT +++
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621

Query: 367 LSGLC------------REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             GLC            RE I EK  +  R    +G   D +TYNT+I  LC+ + L  A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
           F  L  M+ + L     TY  +  +L   G + +A  F   + E                
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE---------------- 725

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
            + +  S  +Y+  I  HC +G  + A+++F +   +G  ++   Y  ++N L +R 
Sbjct: 726 -QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 781



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 13/517 (2%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++L    +  K+ +V   + D        N  TY+ +V G C+   L++A+  +   
Sbjct: 203 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 255

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P V ++N +++G+C  G ++ A      +    L+P V ++N LIN     G  
Sbjct: 256 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 315

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +L  ++++HG++P++VT+NI+ K +   G I  A +++R+M + G SPD +TY  L
Sbjct: 316 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 375

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTIT-LNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +   C+ GN++    ++  M  +G ++N+I   + +L  LC   ++DEA  L N     G
Sbjct: 376 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 435

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y  +I G  +  K + AL L+DEM +++I+P++ T+ A++ GL Q G   +A 
Sbjct: 436 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 495

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L+ L+ SG   D   +N +I G+   G +E+AL+    ++E    P + T N L+ G 
Sbjct: 496 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 555

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   + +A K      L G A   V+Y TL+ +       +    L  EM+ + + P  
Sbjct: 556 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 615

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ I   L    + E         V   +I  +  Q       E I P  I+Y+  I 
Sbjct: 616 VTYSVIFKGLCRGWKHENCNH-----VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 670

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             C       A    E  + + +  + +TY  L++ L
Sbjct: 671 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 707



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 226/473 (47%), Gaps = 13/473 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+VTYN +       G ++   +++ DM  +GL P+  TY IL+ G C+LG 
Sbjct: 325 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 384

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           +   + ++ D++++   L  +   +++++G C  G ++EA  L  +M++  L PD+V Y+
Sbjct: 385 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 444

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +I+   + G+   A  L DE+ +  I PN+ TH  ++   C++G + +A  ++ ++  +
Sbjct: 445 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 504

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G + D V YN +ID   K+G +EEA  +  V+   G+  +  T N++++  C  + + EA
Sbjct: 505 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 564

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L+     G     VSY TL+  Y          +L  EMK   I P+  TY+ +  G
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 624

Query: 300 LSQSGKTEQAIDMLNELL------------QSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           L +  K E    +L E +              G+ PD+ T+NTII   C    +  A  F
Sbjct: 625 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 684

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M  ++      T NIL+  LC  G + KA  F  S   +  ++    Y TLI + C 
Sbjct: 685 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 744

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +   E A  L  ++  +        Y+A+   L     + E++ F  +M+  G
Sbjct: 745 KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQG 797



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 12/393 (3%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           + +L  L K G+++E   L + MK  GL P+   Y+I++ G CKLG    A+ + D M  
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
            + LP+  T+  L+ G C  GML EA  L   + S     D+V YN +I+ + +SG   E
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +L   + E GI P+  T N +I  YCK   I +A KI+  ++  G +P  V+Y TL+D
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-------C-----EKKLDEAYM 241
           A    GN +    +   M  +G+    +T + I   LC       C     E+  ++   
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 648

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            L      G   D+++Y T+I    R +  + A    + MK R +  S+ TYN +I  L 
Sbjct: 649 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 708

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A   +  L +  +   +  + T+I   C +G  E A++  ++++ + F   I 
Sbjct: 709 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 768

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
             + +++ LCR  ++ ++  FF   + +G + D
Sbjct: 769 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 218/487 (44%), Gaps = 60/487 (12%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            ++ML+       M++++  + K+M+   L     +YN+++  F E+ +  + +K I + 
Sbjct: 168 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK 227

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           +EH       T++ ++   C++ K++ A   +R  E     P  V++N+++   CK G +
Sbjct: 228 NEH-------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 280

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A      + + GL  +  + N +++ LC    + EA  L +  +K G   D V+Y  L
Sbjct: 281 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 340

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTY---------------------------- 293
             G+      + A ++  +M ++ + P   TY                            
Sbjct: 341 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 400

Query: 294 --------NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
                   + M+ GL ++G+ ++A+ + N++   G+ PD   ++ +IHG C  G+ + AL
Sbjct: 401 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 460

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
             +++M +K   P+  T   LL GLC++G+L +A     S I  G+ +D V YN +I   
Sbjct: 461 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 520

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
            K   +E+A  L   + E  + P   T+ ++     ++  + EA+K   ++   G     
Sbjct: 521 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG----- 575

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       + PS +SY+  ++ + + G  K   ++  E + +GI     TY  +  
Sbjct: 576 ------------LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 623

Query: 526 GLIKRRK 532
           GL +  K
Sbjct: 624 GLCRGWK 630


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 265/560 (47%), Gaps = 53/560 (9%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E  G +P   TY  ++ A  + G   E   L  +M    +  N      L+ GYC  G +
Sbjct: 284 EELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDV 343

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCN-AGMLEEAFRLRKEMESLKLLP------- 113
             A+R+ D + +    P+V  +++LI  WC+  G +E+A  L   M+ + L P       
Sbjct: 344 NSALRLFDEVVEVGVTPNVAIFSVLIE-WCSKIGNVEKANELYTRMKCMGLQPTVFILNF 402

Query: 114 ---------------------------DVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
                                       VVTYN ++    E G+  EA  L D++   GI
Sbjct: 403 LLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGI 462

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            P+ V++N MI  +CK+G +D A +++  + E+G  P+ +TY  L++ + K G+ E AF 
Sbjct: 463 TPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFN 522

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           M D M   G+     T N+I++ LC   ++ EA   LN+  K+ +    ++Y  +I GY 
Sbjct: 523 MFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYV 582

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++   + A  ++ EM   +I P+  TY ++I G  +S K + A+ M +++ + G+  D T
Sbjct: 583 KEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDIT 642

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            + T+I GFC    +E A +F +K++E    P+ +  NI++S       +E AL   +  
Sbjct: 643 VYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEM 702

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           I      D   Y +LI  L KE +L  A  L SEM  + + PD + Y  +   L   G+L
Sbjct: 703 INNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQL 762

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           E A          GKI  ++   N       I P+ + Y+  I  H  +G  ++A ++ +
Sbjct: 763 ENA----------GKILKEMDGNN-------ITPTVLLYNTLIAGHFKEGNLQEAFRLHD 805

Query: 507 ETRQKGIAINKSTYMNLMNG 526
           E   KG+  + +TY  L+NG
Sbjct: 806 EMLDKGLVPDDTTYDILVNG 825



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 254/531 (47%), Gaps = 19/531 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T   ++ A  K GK  E          +GL  +  +Y+I++   C+   L  A ++V
Sbjct: 221 DCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLV 280

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           +   +   +P   TY  +I      G   EA RL+ EM   ++  +V    +LI  +   
Sbjct: 281 EGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVR 340

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A +L DE+ E G+ PN    +++I+W  K G ++KA ++   M+  G  P     
Sbjct: 341 GDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFIL 400

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+    K   +E A+ ++D     G+  + +T N +L  LC   K++EA  L +    
Sbjct: 401 NFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIG 459

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G     VSY  +I G+ +    + A ++ + + E  + P+  TY  ++ G  + G  E 
Sbjct: 460 KGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEH 519

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A +M ++++ +G++P + TFN+II+G C  G+V +A    N  +++SF P  +T N ++ 
Sbjct: 520 AFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIID 579

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G  +EG ++ A   +R       + + +TY +LI+  CK  +++ A  +  +M+ K L  
Sbjct: 580 GYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLEL 639

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D   YA +     +   +E A KF S ++E G                 + P++I Y+  
Sbjct: 640 DITVYATLIAGFCKMQDMENACKFFSKLLEVG-----------------LTPNTIVYNIM 682

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           I+ + +    + AL + +E     I  +   Y +L++GL+K  K +S A+D
Sbjct: 683 ISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGK-LSFALD 732



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 183/369 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P  V+YN ++    KKG +++  ++++ + + GL PN  TY IL+ G  K G 
Sbjct: 457 MIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD 516

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A  + D M     +P  +T+N +ING C  G + EA            +P  +TYN 
Sbjct: 517 CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNC 576

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + + G    A  +  E+    I PN +T+  +I  +CK  K+D A K+  +M+  G
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   Y TLI   CK  +ME A +    +   GL  NTI  N ++        ++ A 
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAAL 696

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L           D   Y +LI G  ++ K + AL L+ EM  R I+P  F YN +I GL
Sbjct: 697 NLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGL 756

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ E A  +L E+  + + P    +NT+I G   EG +++A + H++M++K   PD 
Sbjct: 757 CNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDD 816

Query: 361 VTCNILLSG 369
            T +IL++G
Sbjct: 817 TTYDILVNG 825



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 229/501 (45%), Gaps = 19/501 (3%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
            +N L+  Y +   + EA+     M ++  +P V   N+L+       M+E+A RL  EM
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
              ++  D  T   L+    + G+ +EA +   +    G+K +A +++I+I+  C+   +
Sbjct: 214 AERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDL 273

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           D A K+V   EE G+ P   TY  +I A  + GN  EA R+ D M    + +N     ++
Sbjct: 274 DLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSL 333

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +   C    ++ A  L +   + G   +   +  LI    +     +A +L+  MK   +
Sbjct: 334 IKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGL 393

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P+ F  N ++ G  +    E A  +L+  +++G I    T+N ++   C  G+V +A  
Sbjct: 394 QPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG-IASVVTYNIVLLWLCELGKVNEACN 452

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             +KM+ K   P +V+ N ++ G C++G ++ A +     I  G   +++TY  L+    
Sbjct: 453 LWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSF 512

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA---------QKFTSIMV 457
           K+   E AF +  +M    + P  YT+ +I   L + GR+ EA         Q F    +
Sbjct: 513 KKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSM 572

Query: 458 ETGKINHQVVQPNTSKTPE---------EIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
               I    V+     + E         EI P+ I+Y+  IN  C   +   AL++ ++ 
Sbjct: 573 TYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDM 632

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
           ++KG+ ++ + Y  L+ G  K
Sbjct: 633 KRKGLELDITVYATLIAGFCK 653



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 196/429 (45%), Gaps = 21/429 (4%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACK 171
           L D   +N L+  +  + +  EA +    + E G+ P     N+++    +   ++ A +
Sbjct: 149 LSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHR 208

Query: 172 IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
           +   M E     DC T   L+ A  K G   EA R       +GLK++  + + ++  +C
Sbjct: 209 LFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVC 268

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
               LD A  L+    + G+   E +Y  +I    R      AL+L DEM + ++  +  
Sbjct: 269 RGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVA 328

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE-GQVEKALQFHNK 350
              ++I G    G    A+ + +E+++ G+ P+   F+ +I  +CS+ G VEKA + + +
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIE-WCSKIGNVEKANELYTR 387

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M     +P +   N LL G  ++ +LE A       +  G A   VTYN ++  LC+  +
Sbjct: 388 MKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGK 446

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           + +A  L  +M  K + P   +Y  +     + G +++A +  + ++E+G          
Sbjct: 447 VNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESG---------- 496

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                  + P++I+Y+  +     +G  + A  +F++    GI     T+ +++NGL K 
Sbjct: 497 -------LKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKV 549

Query: 531 RKSISKAVD 539
            + +S+A D
Sbjct: 550 GR-VSEARD 557


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 241/478 (50%), Gaps = 33/478 (6%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  PD+ TY  I+    + G + E    + +M ++G V +  T  ++++ +C+   
Sbjct: 822  MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 881

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  A+     +T+    P++  Y+ +I+G C  G +++AF L +EM      P+V T+ +
Sbjct: 882  VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941

Query: 121  LINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI+   + G +  AF+L  +L      KPN  T+  MI  YCKE K+ +A  +   M+E 
Sbjct: 942  LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001

Query: 180  GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            G  P+  TY TLID +CKAGN  +A+ +M++M  +G   NT T N+I+  LC   + +EA
Sbjct: 1002 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 1061

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            + LLN+  +     D V+Y  LI+   +    N+AL   ++M +    P    Y  +I  
Sbjct: 1062 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 1121

Query: 300  LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
              +    + +  + +E+++ G+ P + T+ ++I G+C E +V  A++F  KM +    PD
Sbjct: 1122 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 1181

Query: 360  IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT---------------------- 397
             ++   L+SGLC+E  L++A + + + I KG +   VT                      
Sbjct: 1182 SISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE 1241

Query: 398  ----------YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                       +TLI  LC E+++  A     ++ +K++  DR T AA +TA +ES +
Sbjct: 1242 RLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNK 1299



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 246/508 (48%), Gaps = 25/508 (4%)

Query: 24   GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
            GKL E  D++ DM+ QGLV      N ++    ++  ++ A  V D M+     PD  TY
Sbjct: 775  GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 84   NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
              +I G+C  G + EA R   EM     + D  T   +I  F E      A     ++ +
Sbjct: 835  KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 144  HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             G+ PN + ++ MI   CK G + +A +++  M +NG+ P+  T+ +LI   CK G  E 
Sbjct: 895  MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 954

Query: 204  AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            AFR+ + ++     K N  T   ++   C E+KL  A ML     ++G   +  +Y TLI
Sbjct: 955  AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 1014

Query: 263  TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
             G+ +    ++A +L + M      P+T TYN+++ GL + G+ E+A  +LN   Q+ + 
Sbjct: 1015 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 1074

Query: 323  PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
             D  T+  +I   C    + +AL F NKM +  F+PDI     L++  CR+ +++ + K 
Sbjct: 1075 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKL 1134

Query: 383  FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            F   I  G A    TY ++I   C+E+++  A     +M +    PD  +Y A+ + L +
Sbjct: 1135 FDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCK 1194

Query: 443  SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
              RL+EA++    M++ G             +P E+   +++Y     E+C    +  A+
Sbjct: 1195 ESRLDEARQLYDTMIDKG------------LSPCEVTRVTLTY-----EYCKTEDFASAM 1237

Query: 503  QIFEETRQKGIAINKSTYMNLMNGLIKR 530
             I E        +NK  ++  ++ LI++
Sbjct: 1238 VILER-------LNKKLWIRTVHTLIRK 1258



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 198/419 (47%), Gaps = 19/419 (4%)

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            ++  F E G+  EA  +I ++   G+       N +I    +   ++ A  +   M   G
Sbjct: 767  MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD  TY  +I   C+ GN+ EA R +  M  +G  ++  TL  I+   C +  ++ A 
Sbjct: 827  VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
               +  +K G   + ++Y ++I+G  +     +A +L +EM +    P+ +T+ ++I GL
Sbjct: 887  WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946

Query: 301  SQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             + G TE+A  +  +L++S    P+  T+  +I G+C E ++ +A     +M E+   P+
Sbjct: 947  CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 1006

Query: 360  IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
              T   L+ G C+ G   KA +       +G   ++ TYN+++  LCK  R E+AF LL+
Sbjct: 1007 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 1066

Query: 420  EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
               + ++  D  TY  + +   +   + +A  F + M + G       QP+         
Sbjct: 1067 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG------FQPDIHL------ 1114

Query: 480  PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
                 Y+  I   C Q   KD+ ++F+E  + G+A  K TY +++ G   R K +S AV
Sbjct: 1115 -----YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC-REKKVSLAV 1167


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 245/519 (47%), Gaps = 39/519 (7%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           + I D L  +  L      L  +K  G+  +   + +L+  Y K+G   +AM     M  
Sbjct: 95  DLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRD 154

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               PDV+TYNM+++       L  A  +   M  L  LP+V T++ LI+   +SG   +
Sbjct: 155 FDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKD 214

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A  L DE+ + GI P+A T+ ++I   C+  ++D A ++   M+++G  PD VT N L++
Sbjct: 215 ALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLN 274

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C    ++EAF                                    LL    K GY L
Sbjct: 275 GFCMLDRVDEAFS-----------------------------------LLRLFEKDGYVL 299

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D   Y  LI G FR ++      L+ +M E  + P  + Y  M+ GL+++GK   A+++L
Sbjct: 300 DVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELL 359

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           NE+ +SG++PD   +N +I GFC  G + +A     ++      P++ T +IL+SG+CR 
Sbjct: 360 NEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRN 419

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G+   A + F      G    +VT+N+LI  LCK  +LE A  L  +ME  +        
Sbjct: 420 GLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRL 479

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
           +   + +++S  L   QK    + ++G I H+  +           P   +Y+  +N  C
Sbjct: 480 SQGPSHVLDSASL---QKMVEQLCDSGLI-HKAYRILMQLADSGDAPGIYTYNILVNGFC 535

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             G +  A ++F E + KG++ +  TY  L+NGL++ ++
Sbjct: 536 KLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQR 574



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 236/467 (50%), Gaps = 17/467 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F C PD  TYN ILD L +K  L     + + M K   +PN  T++IL+ G CK G 
Sbjct: 152 MRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGN 211

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A+ + D MTQ   LPD +TY ++I+G C +  +++A+RL  +M+   + PD VT N 
Sbjct: 212 VKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNA 271

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N F    R  EAF L+   ++ G   +   ++ +I+   +  + +    + R M E+ 
Sbjct: 272 LLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDN 331

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD   Y  ++    +AG + +A  +++ M   G+  +T+  N ++   C    L EA 
Sbjct: 332 VKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEAR 391

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S+   + +  +Y  LI+G  R+     A ++++EM++    PS  T+N++I GL
Sbjct: 392 SLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGL 451

Query: 301 SQSGKTEQAIDMLNELLQSGMIP--------------DETTFNTIIHGFCSEGQVEKALQ 346
            ++G+ E+A  +L   ++ G  P              D  +   ++   C  G + KA +
Sbjct: 452 CKTGQLEKA-HLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYR 510

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              ++ +    P I T NIL++G C+ G    A K FR    KG + D+VTY TLI+ L 
Sbjct: 511 ILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLL 570

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           + +R EDA+ +  +ME+    PD   Y  + T +    R+E  + F+
Sbjct: 571 RFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCR--RMELPRAFS 615



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/584 (23%), Positives = 260/584 (44%), Gaps = 66/584 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    CLP+  T++ ++D L K G + +   L  +M ++G++P+  TY +++SG C+   
Sbjct: 187 MMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL------------------ 102
           + +A R+ D M  +   PD  T N L+NG+C    ++EAF L                  
Sbjct: 247 VDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSC 306

Query: 103 -------RKEMESLKLL----------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                   K  E ++LL          PDV  Y  ++    E+G+  +A +L++E+ E G
Sbjct: 307 LIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESG 366

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+ V +N++IK +C  G + +A  +   +  +   P+  TY+ LI   C+ G   +A 
Sbjct: 367 VVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQ 426

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML-------------LNSASKRGYY 252
            + + M + G   + +T N+++  LC   +L++A++L             L  +    + 
Sbjct: 427 EIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHV 486

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           LD  S   ++         ++A ++  ++ +    P  +TYN ++ G  + G    A  +
Sbjct: 487 LDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKL 546

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
             E+   G+ PD  T+ T+I+G     + E A +  ++M +    PD      +++ +CR
Sbjct: 547 FREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCR 606

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              L +A   +  ++   ++ +       I    +++ +E A   L EM+ K    D   
Sbjct: 607 RMELPRAFSLWLKYLRNIRSQEDEAIKA-IEGYFEKQEVEKAVRGLLEMDFKLNDFDLGP 665

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           YA     L ++ R+ EA K   I+ E     ++VV      TP    P  +     I   
Sbjct: 666 YAIWLIGLCQTRRVGEALKIFLILEE-----YKVV-----ITP----PCCVKL---IYFL 708

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
             +G    A+ +F  T +KG  + +     ++  L++R+  + K
Sbjct: 709 LKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRRKGEMGK 752



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 17/171 (9%)

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           +C+++   L  +  LE   +   +    G  V +  +  LI    K    + A      M
Sbjct: 93  SCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSM 152

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +    PD YTY  I   L++   L  A    + M++   +                 P+
Sbjct: 153 RDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCL-----------------PN 195

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             ++S  I+  C  G  KDAL +F+E  Q+GI  +  TY  +++GL + ++
Sbjct: 196 VATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 250/484 (51%), Gaps = 7/484 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +    ++   F   K+ +   ++  ++K G  P+   YN ++SG+CK   +  A
Sbjct: 107 GYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHA 165

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+D M +    PDV TYN+LI  +C  G L+ A R+  ++      P V+TY  LI  
Sbjct: 166 SKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEA 225

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   EA KL+DE+   G++P+  T+N+++   CKEG +D+A + +  + +NG    
Sbjct: 226 TITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAG 285

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN L+      G  E   ++M  M  KG + N IT +T++  LC + K+DEA  +L 
Sbjct: 286 VSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLK 345

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++    D  SY  LI+   R+ K + A++  D+M     +P   +YN+++  L ++G
Sbjct: 346 VMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNG 405

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+++  +L + G  P+  ++NT+     S G   +AL    +M+     PD +T N
Sbjct: 406 NADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYN 465

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEE 423
            L+S LCR+G++++A++         K   +V +YNT++  LCK +R+ DA  +L+ M  
Sbjct: 466 SLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN 525

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           +   P+  TY  +   +  +G   +A +  +++V     N   +  ++ K  ++I P   
Sbjct: 526 EGCLPNETTYTLLIQGIGFAGWRYDAMELANLLV-----NMDAISEDSFKRFQKIFPVFD 580

Query: 484 SYSE 487
           ++ E
Sbjct: 581 AHKE 584



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 228/440 (51%), Gaps = 2/440 (0%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           K  K +E    L  M  +G  P+      L+ G+  +  +++A++V++++ ++   PDV+
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-PDVF 147

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            YN +I+G+C A  ++ A ++   M+     PDVVTYN LI  F   GR   A +++D+L
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            +   KP  +T+ I+I+    +G ID+A K++  M   G  PD  TYN +++  CK G +
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + AF  +  + + G      T N +L  L  E K +    L++    +G   + ++Y TL
Sbjct: 268 DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTL 327

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           IT   RD K + A  +   MKE+ + P  ++Y+ +I  L + GK + AI+ L++++  G 
Sbjct: 328 ITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGH 387

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD  ++N+I+   C  G  ++AL    K+ E    P+  + N L   L   G   +AL 
Sbjct: 388 LPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALG 447

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM-EEKKLGPDRYTYAAIHTAL 440
                +  G   D +TYN+LIS LC++  ++ A  LL +M E +K  P   +Y  +   L
Sbjct: 448 MILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGL 507

Query: 441 VESGRLEEAQKFTSIMVETG 460
            +  R+ +A +  + MV  G
Sbjct: 508 CKVQRIIDAIEVLAAMVNEG 527



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 237/472 (50%), Gaps = 17/472 (3%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           CK     E++  +  M      PDV     LI G+ N   +E+A ++ + +E     PDV
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-PDV 146

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
             YN +I+ F ++ R   A K++D + + G +P+ VT+NI+I  +C  G++D A +++  
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           + ++   P  +TY  LI+A    G ++EA +++D M  +GL+ +  T N +++ +C E  
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           LD A+  L+  SK G      +Y  L+     + K     KL  +M  +   P+  TY+ 
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + GK ++A ++L  + +  + PD  +++ +I   C EG+V+ A++F + M+   
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PDI++ N +L+ LC+ G  ++AL  F      G   ++ +YNTL  +L        A 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
           G++ EM    + PD  TY ++ + L   G +++A +    M E+                
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFES---------------- 490

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           E+  P+ ISY+  +   C   R  DA+++      +G   N++TY  L+ G+
Sbjct: 491 EKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 189/375 (50%), Gaps = 1/375 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTYN ++     +G+L+    ++  + K    P   TY IL+      G 
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM+++D M      PD +TYN+++NG C  GML+ AF     +     +  V TYN 
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      G+     KL+ ++   G +PN +T++ +I   C++GKID+A  +++ M+E  
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  +Y+ LI A C+ G ++ A   +D M   G   + ++ N+IL +LC     DEA 
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL 411

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     + G   +  SY TL    +      RAL +  EM    I P   TYN++I  L
Sbjct: 412 NIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCL 471

Query: 301 SQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + G  +QAI++L ++ +S    P   ++NT++ G C   ++  A++    MV +   P+
Sbjct: 472 CRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPN 531

Query: 360 IVTCNILLSGLCREG 374
             T  +L+ G+   G
Sbjct: 532 ETTYTLLIQGIGFAG 546



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 18/231 (7%)

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +S K ++++  L  ++  G  PD      +I GF +  ++EKA+Q   +++EK  KPD+ 
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDVF 147

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             N ++SG C+   ++ A K       +G   D VTYN LI + C   RL+ A  ++ ++
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +    P   TY  +  A +  G ++EA K    M+  G                 + P 
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG-----------------LRPD 250

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +Y+  +N  C +G    A +      + G     STY  L+  L+   K
Sbjct: 251 RYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGK 301



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 18/205 (8%)

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           +T F   ++  C   + +++L F   MV + +KPD++ C  L+ G      +EKA++   
Sbjct: 77  DTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME 136

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                GK  D   YN +IS  CK  R++ A  +L  M+++   PD  TY  +       G
Sbjct: 137 ILEKHGKP-DVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRG 195

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           RL+ A           ++  Q+++ N         P+ I+Y+  I    +QG   +A+++
Sbjct: 196 RLDLAL----------RVMDQLLKDNCK-------PTVITYTILIEATITQGGIDEAMKL 238

Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
            +E   +G+  ++ TY  ++NG+ K
Sbjct: 239 LDEMLSRGLRPDRYTYNVVVNGMCK 263


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 247/529 (46%), Gaps = 20/529 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD    N +L AL    + +++  +  +M + G+ P+  TYN L+  + K G 
Sbjct: 160 MASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGR 219

Query: 61  L-KEAMRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             K AM + ++ T+    LP+  TYN++I G    G LEEA  L + M  L       TY
Sbjct: 220 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTY 278

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI      G   + + L  E++  GI P  VT+N MI    + G ++ A      M  
Sbjct: 279 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 338

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD +TYN+L++  CKAGN++EA  +   + R GL    +T N  +   C    L+E
Sbjct: 339 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEE 398

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A +L     ++G   +  +Y  L+ G         A + +DEM  + + P  F YN  I 
Sbjct: 399 ARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRIC 458

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
                G   +A+++   L+  G+  D  T+N +IHG C  G ++ A +   KMV    +P
Sbjct: 459 AELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 518

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D +T   L+   C  G+L +A K F + I  G    +VT+  +I + C+   L  A+G  
Sbjct: 519 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 578

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            +M E+ + P+  TY  +  AL   GR + A      M+E G + ++             
Sbjct: 579 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKY------------ 626

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                +Y+  I+ +C  G ++DA++ + E  Q GI  +  T+  L+ G 
Sbjct: 627 -----TYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 188/388 (48%), Gaps = 37/388 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD +TYN++L+   K G L E   L  D+++ GL P   TYNI + GYC+LG 
Sbjct: 336 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGD 395

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  + + M +   LP+V TY +L+ G  N   L  A     EM S  L PD   YNT
Sbjct: 396 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNT 455

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I      G    A +L + L   GI  + VT+NI+I   CK G +  A ++   M  NG
Sbjct: 456 RICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 515

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PDC+TY  LI A+C+ G + EA ++ + M   GL  + +T   I+H  C    L  AY
Sbjct: 516 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 575

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                                  G+FR            +M E  + P+  TYN +I  L
Sbjct: 576 -----------------------GWFR------------KMLEEGVEPNEITYNVLIHAL 600

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+T+ A    +E+L+ G++ ++ T+  +I G C  G  E A++F+ +M +    PD 
Sbjct: 601 CRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDY 660

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL 388
           +T   L+ G   +G +   +++    IL
Sbjct: 661 LTHKALVKGF--DGHVHHTIEYLDIVIL 686



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 20/264 (7%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D  +   L  + EM    + P     N ++  L  + + +    +  E+LQ G+ P   T
Sbjct: 147 DTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVT 206

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFK--PDIVTCNILLSGLCREGILEKALKFFRS 385
           +NT++  F  EG+ +K      +M  +     P+ VT N++++GL R+G LE+A +    
Sbjct: 207 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 266

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
             L  KA  S TYN LI+ L     ++  + L  EME + + P   TY A+   L++SG 
Sbjct: 267 MRLSKKA-SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGL 325

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +E AQ   + M   G +                 P  I+Y+  +N +C  G  K+AL +F
Sbjct: 326 VEAAQVKFAEMRAMGLL-----------------PDVITYNSLLNGYCKAGNLKEALLLF 368

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
            + R+ G+A    TY   ++G  +
Sbjct: 369 GDLRRAGLAPTVLTYNIRIDGYCR 392


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 242/521 (46%), Gaps = 19/521 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWLKEAMRVV 68
           V  N+IL    K GK   + +   +M K G     N  T   L+  +C  G +     ++
Sbjct: 192 VACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELL 251

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           +   +    P   TYN LI G+C A        +   M +   LP + TY  +IN   ++
Sbjct: 252 NQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKN 311

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
              +EA+++ ++L + G  P+ V +  MI   C+ G   +A K+   M + G  P+  TY
Sbjct: 312 EECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTY 371

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NT++  + K+G+ E A  + + M  KG    T+T N I+  LC   K DEA+ +    S+
Sbjct: 372 NTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSE 431

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D ++Y +LI G+ ++ K +  + L +E+  +   PS   Y  +I    + G  E 
Sbjct: 432 TGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEA 491

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L ++   G+ P+  T++T++HG    G  E   + +N+   K +     TCN ++S
Sbjct: 492 AKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIIS 551

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LC  G  ++A + F+     G   D++TYN+LI   CKE ++  +  LL+E+  + L P
Sbjct: 552 ELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQP 611

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
              +YA++   L ++G  E A++    MV  G                 I+P +      
Sbjct: 612 SASSYASLIIQLCQNGDAESAKRLWGDMVSKG-----------------IEPHANLREHL 654

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+  C QGR  + +       +  I   K+ + +L   LI+
Sbjct: 655 ISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQ 695



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 220/467 (47%), Gaps = 35/467 (7%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T   ++ A    G++    +LL+   K GL P   TYN L++G+C+         V+  M
Sbjct: 230 TVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTM 289

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                LP ++TY  +ING C      EA+R+  +++     PD V Y T+I+   E G  
Sbjct: 290 IARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSF 349

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA KL  E+ + G++PNA T+N M+    K G  ++AC++   M   G+    VT N +
Sbjct: 350 GEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKI 409

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS------ 245
           I   C  G  +EAF +   M   G++ + IT N+++   C E K+DE   LLN       
Sbjct: 410 ISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDP 469

Query: 246 ---------------------ASKR--------GYYLDEVSYGTLITGYFRDEKANRALK 276
                                A+KR        G + +  +Y T++ G  +        +
Sbjct: 470 QPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRE 529

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L++E   +    +T T N +I  L   GK+++A +M  ++ ++G+  D  T+N++I GFC
Sbjct: 530 LYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFC 589

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
            EG+V K++   N++V +  +P   +   L+  LC+ G  E A + +   + KG    + 
Sbjct: 590 KEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHAN 649

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               LIS LCK+ R  +    L  M E K+ P +  +  +   L++S
Sbjct: 650 LREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQS 696



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 225/493 (45%), Gaps = 22/493 (4%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
            P+  + N+L         ++ A  V D+      +PD  +    +   C  G +EEA  
Sbjct: 121 TPDPISSNMLFEALLDAKAVRAAKMVRDIAG---FIPDSASLEQYVKCLCGVGFIEEAIE 177

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI--MIKW 159
           +  +++   +   +V  N++++   ++G++   F+   E+ + G   +A T  +  +I+ 
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQA 237

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           +C  G++ +  +++    + G  P   TYN LI   C+A N      ++  M  +     
Sbjct: 238 FCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPT 297

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
             T   I++ LC  ++  EAY + N    RGY  D V Y T+I G         A KLW 
Sbjct: 298 IYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWF 357

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM ++ + P+ +TYN M+ G  +SG  E+A ++ NE+   G      T N II   CS G
Sbjct: 358 EMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRG 417

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           + ++A +   KM E   + D +T N L+ G C+EG +++ +      + +        Y 
Sbjct: 418 KSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYE 477

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI   CK+   E A  LL +M  K L P+ YTY  +    ++SG  E  ++  +     
Sbjct: 478 LLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNK 537

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G          T+ T  +I          I+E CS+G+  +A ++F++  + GI  +  T
Sbjct: 538 G-------YGTTTATCNKI----------ISELCSRGKSDEASEMFKKMSETGIKADAIT 580

Query: 520 YMNLMNGLIKRRK 532
           Y +L+ G  K  K
Sbjct: 581 YNSLIRGFCKEGK 593



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 123/235 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D +TYN+++    K+GK++E  +LL+++  Q   P+ + Y +L+   CK G  + A
Sbjct: 433 GIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAA 492

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++  M+     P+ +TY+ +++G   +G  E    L  E  +        T N +I+ 
Sbjct: 493 KRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISE 552

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+S EA ++  ++ E GIK +A+T+N +I+ +CKEGK+ K+  ++  +   G  P 
Sbjct: 553 LCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPS 612

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +Y +LI   C+ G+ E A R+   M  KG++ +      ++  LC + +  E 
Sbjct: 613 ASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEG 667



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 89/193 (46%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TY+T+L    K G    VR+L ++   +G      T N ++S  C  G 
Sbjct: 499 MSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGK 558

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA  +   M++     D  TYN LI G+C  G + ++  L  E+ +  L P   +Y +
Sbjct: 559 SDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYAS 618

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI +  ++G +  A +L  ++   GI+P+A     +I   CK+G+  +    +  M EN 
Sbjct: 619 LIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENK 678

Query: 181 FSPDCVTYNTLID 193
             P    +  L +
Sbjct: 679 IKPKKAAFEDLAE 691



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 55/124 (44%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D +TYN+++    K+GK+ +  +LL+++  QGL P+ ++Y  L+   C+ G  + A
Sbjct: 573 GIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESA 632

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M      P       LI+G C  G   E       M   K+ P    +  L   
Sbjct: 633 KRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAEC 692

Query: 125 FFES 128
             +S
Sbjct: 693 LIQS 696


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 246/529 (46%), Gaps = 20/529 (3%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  PD    N +L  L    + +++  +  +M + G+ P+  TYN L+  + K G 
Sbjct: 1075 MASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGR 1134

Query: 61   L-KEAMRVVDLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
              K AM + ++ T+    LP+  TYN++I G    G LEEA  L + M  L       TY
Sbjct: 1135 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTY 1193

Query: 119  NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            N LI      G   + + L  E++  GI P  VT+N MI    + G ++ A      M  
Sbjct: 1194 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 1253

Query: 179  NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
             G  PD +TYN+L++  CKAGN++EA  +   + R GL    +T N ++   C    L+E
Sbjct: 1254 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 1313

Query: 239  AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            A +L     ++G   +  +Y  L+ G         A + +DEM  + + P  F YN  I 
Sbjct: 1314 ARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRIC 1373

Query: 299  GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
                 G   +A ++   L+  G+  D  T+N +IHG C  G ++ A +   KMV    +P
Sbjct: 1374 AELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQP 1433

Query: 359  DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            D +T   L+   C  G+L +A K F + I  G    +VT+  +I + C+   L  A+G  
Sbjct: 1434 DCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF 1493

Query: 419  SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             +M E+ + P+  TY  +  AL   GR + A      M+E G + ++             
Sbjct: 1494 RKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKY------------ 1541

Query: 479  DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                 +Y+  I+ +C  G ++DA++ + E  Q GI  +  T+  L+ G 
Sbjct: 1542 -----TYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 201/391 (51%), Gaps = 8/391 (2%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G +P  VTYN ++  L + G +   +   ++M+  GL+P+  TYN L++GYCK G 
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            LKEA+ +   + +    P V TYN+LI+G+C  G LEEA  L++EM     LP+V TY  
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE---GKIDKACKIVRNME 177
            L+           A +  DE+   G++P+   +N  I   C E   G I +A ++   + 
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGDIARAFELREVLM 1392

Query: 178  ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
              G S D VTYN LI   CK GN+++A  +   M   GL+ + IT   ++H  C    L 
Sbjct: 1393 LEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLR 1452

Query: 238  EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            EA  + N+    G     V++  +I  Y R      A   + +M E  + P+  TYN +I
Sbjct: 1453 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 1512

Query: 298  WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
              L + G+T+ A    +E+L+ G++ ++ T+  +I G C  G  E A++F+ +M +    
Sbjct: 1513 HALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIH 1572

Query: 358  PDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            PD +T   LL G   +G +   +++  + IL
Sbjct: 1573 PDYLTHKALLKGF--DGHVHHTIEYLDNVIL 1601



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 20/257 (7%)

Query: 275  LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            L  + EM    + P     N ++  L  + + +    +  E+L+ G+ P   T+NT++  
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 335  FCSEGQVEKALQFHNKMVEKSFK--PDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            F  EG+ +K      +M  +     P+ VT N++++GL R+G LE+A +      L  KA
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 393  VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
              S TYN LI+ L     ++  + L  EME + + P   TY A+   L++SG +E AQ  
Sbjct: 1189 -SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 453  TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             + M   G +                 P  I+Y+  +N +C  G  K+AL +F + R+ G
Sbjct: 1248 FAEMRAMGLL-----------------PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290

Query: 513  IAINKSTYMNLMNGLIK 529
            +A    TY  L++G  +
Sbjct: 1291 LAPTVLTYNILIDGYCR 1307


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 262/525 (49%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  + YN IL  L K GK++E   +  +MKK    PN +TYNIL+   C+ G L  A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTA 396

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M +    P+V T N++++  C +  L+EA  + +EM+     PD +T+ +LI+ 
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A+K+ +++ +   + N++ +  +IK +   G+ +   KI ++M     SPD
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG  E+   M + +  +    +  + + ++H L      +E Y L  
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G  LD  +Y  +I G+ +  K N+A +L +EMK +   P+  TY ++I GL++  
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E     +  +   ++++I GF   G++++A     ++++K   P++ T N
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        + VTY  LI+ LCK R+   AF    EM+++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P   +Y  + + L ++G + EA          G +                 P S  
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-----------------PDSAC 799

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    +  R  DA  +FEETR++G+ I+  T + L++ L K
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 233/492 (47%), Gaps = 35/492 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++D L + GKL+   +L   M+K GL PN  T NI+V   CK   L EA  +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      PD  T+  LI+G    G +++A+++ ++M       + + Y +LI  FF 
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494

Query: 128 SGRSMEAFK-----------------------------------LIDELDEHGIKPNAVT 152
            GR  +  K                                   + +E+      P+A +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           ++I+I    K G  ++  ++  +M+E G   D   YN +ID  CK G + +A+++++ M 
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            KG +   +T  +++  L    +LDEAYML   A  +   L+ V Y +LI G+ +  + +
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  + +E+ ++ + P+ +T+N+++  L ++ +  +A+     + +    P++ T+  +I
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G C   +  KA  F  +M ++  KP  ++   ++SGL + G + +A   F  +   G  
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            DS  YN +I  L    R  DAF L  E   + L     T   +   L ++  LE+A   
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854

Query: 453 TSIMVETGKINH 464
            +++ ETGK  H
Sbjct: 855 GAVLRETGKARH 866



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 257/564 (45%), Gaps = 53/564 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P    Y T++ A       + +  L   M++ G  P    +  L+ G+ K G 
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-- 118
           +  A+ ++D M  +    D+  YN+ I+ +   G ++ A++   E+E+  L PD VTY  
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278

Query: 119 ---------------------------------NTLINRFFESGRSMEAFKLIDELDEHG 145
                                            NT+I  +  +G+  EA+ L++     G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+ + +N ++    K GK+D+A K+   M+++  +P+  TYN LID  C+AG ++ AF
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAF 397

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M + GL  N  T+N ++  LC  +KLDEA  +      +    DE+++ +LI G 
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +  + + A K++++M +     ++  Y ++I      G+ E    +  +++     PD 
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
              NT +      G+ EK      ++  + F PD  + +IL+ GL + G   +  + F S
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +G  +D+  YN +I   CK  ++  A+ LL EM+ K   P   TY ++   L +  R
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           L+EA     ++ E  K              + I+ + + YS  I+     GR  +A  I 
Sbjct: 638 LDEAY----MLFEEAK-------------SKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
           EE  QKG+  N  T+ +L++ L+K
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVK 704



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 245/536 (45%), Gaps = 19/536 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++L  + +    + +  +L +M   G  P+  T   +V G  K   L+E   VV +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y  LI  +      +    L ++M+ L   P V  + TLI  F + GR 
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+    +  + V +N+ I  + K GK+D A K    +E NG  PD VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CKA  ++EA  M + + +      T   NT++       K DEAY LL     +G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               ++Y  ++T   +  K + ALK+++EMK +   P+  TYN +I  L ++GK + A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + + ++G+ P+  T N ++   C   ++++A     +M  K   PD +T   L+ GL 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD-- 429
           + G ++ A K +   +      +S+ Y +LI +     R ED   +  +M  +   PD  
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518

Query: 430 ---RYTYAAIHTALVESGR--LEE--AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS- 481
               Y          E GR   EE  A++F         + H +++   +    E+  S 
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 482 --------SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + +Y+  I+  C  G+   A Q+ EE + KG      TY ++++GL K
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634


>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 223/475 (46%), Gaps = 35/475 (7%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P    YN ++DAL K   L+        M     VP+R TYNIL+ G C+LG + E
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R++  M      P+V+TY +LI+G+ NA    EAF++ + M+   ++P+  T  +L++
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVH 342

Query: 124 RFFESGRSMEAFKLIDELDEH-----------------------------------GIKP 148
             F      +AF+L+ E  E                                    G  P
Sbjct: 343 GVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVP 402

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           ++ T NI +    K+  +   C +  N  ++G  P   TY TLI+A  KAG ME   R M
Sbjct: 403 SSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYM 462

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           D +   GL  N  + N ++  LC  K +D A  +      RG   + V+Y TLI G+ R+
Sbjct: 463 DRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRN 522

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              ++A +L + + E +  P  FT+N++I GL Q+ K E A     E+++  + P+  T+
Sbjct: 523 GNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITY 582

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I  FC+ G V ++     +M     +PD  + N L+ G   +   +KA K F S + 
Sbjct: 583 NILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLR 642

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            G   D+ TY  LI SLCK  R + A  +   M+E    PD YT +     L  S
Sbjct: 643 LGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAHS 697



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 218/502 (43%), Gaps = 23/502 (4%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLG---WLKEAMRVVDLMTQNKSLPDVWTYNMLI 87
           DLL  +K+ GL        IL   + +LG   +  E    + L+  N   P    YN ++
Sbjct: 180 DLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLN---PTTRLYNAVM 236

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +    +  L+ A+   ++M S   +PD  TYN LI+     G   EA +L+ +++  G  
Sbjct: 237 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 296

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           PN  T+ I+I  +    +  +A K+++ M+E    P+  T  +L+    +    ++AF +
Sbjct: 297 PNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFEL 356

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +     +   +  +  + IL+ L       EA M L    K GY     ++   +    +
Sbjct: 357 LLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLK 416

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
                    ++D   +  + P   TY  +I  L ++GK E     ++ L+  G+I +  +
Sbjct: 417 KLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYS 476

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +N +I   C    +++A +    +  +   P+IVT N L+ G CR G ++KA +     +
Sbjct: 477 YNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLL 536

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
                 D  T+N+LI  LC+  + E+AFG  +EM E  + P+  TY  +  +    G + 
Sbjct: 537 ESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVS 596

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            +      M   G                 I P + S++  I  +  + R++ A ++F+ 
Sbjct: 597 RSTHLLRQMKLHG-----------------IQPDTFSFNALIQGYTGKNRFQKAEKLFDS 639

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
             + GI  +  TY  L+  L K
Sbjct: 640 MLRLGIQPDNYTYGALIKSLCK 661



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/396 (20%), Positives = 171/396 (43%), Gaps = 17/396 (4%)

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L+ ++ E G+K       I+   + + G  +   ++   +   G +P    YN ++DA  
Sbjct: 181 LLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALI 240

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           K+ +++ A+     M       +  T N ++H +C    +DEA  L+      GY+ +  
Sbjct: 241 KSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVF 300

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  LI G+F  ++A  A K+   MKER ++P+  T  +++ G+ +    ++A ++L E 
Sbjct: 301 TYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEF 360

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           ++      +   + I++   +     +A+ F  K  ++ + P   T NI L+ + ++  L
Sbjct: 361 VERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDL 420

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +     F + +  G      TY TLI +L K  ++E     +  +    L  + Y+Y  +
Sbjct: 421 KVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMV 480

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L +   ++ A +    +   G                 I P+ ++Y+  I   C  G
Sbjct: 481 IDCLCKGKSMDRASEMFRDLHNRG-----------------ISPNIVTYNTLIGGFCRNG 523

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               A ++ E   +     +  T+ +L++GL +  K
Sbjct: 524 NMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHK 559


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 227/450 (50%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D +T N IL  L  +GKL     L+  M ++  +P+  +   L+ G+ + G + EA + +
Sbjct: 129 DEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTL 188

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M  +  +PD  TYNM+I G C  G L  A  L ++M      PD +TYN++I   F+ 
Sbjct: 189 NKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDK 248

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +A     +    G  P  +T+ ++I+  CK     +A +++ +M   G  PD VTY
Sbjct: 249 GNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTY 308

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N+L++   K G  E+   ++  +   G++ N +T NT++H+L      DE   +L   ++
Sbjct: 309 NSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNE 368

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
                  V+Y  L+ G  +    +RA+  +  M      P   TYN ++ GL + G  ++
Sbjct: 369 TSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDE 428

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            I +LN L+ +   P   T+N +I G    G +E A + +++MV+K   PD +T + L  
Sbjct: 429 GIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTW 488

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G CR   LE+A +  +   +K + + +  Y  +I  LC++++++ A  +L  M + +  P
Sbjct: 489 GFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNP 548

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           D   Y+A+  A+ + G L+EA      +++
Sbjct: 549 DERIYSALIKAVADGGMLKEANDLHQTLIK 578



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 208/419 (49%), Gaps = 17/419 (4%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D +T N ++ R    G+   A +LID +      P+  +   +I+ + ++G +D+ACK +
Sbjct: 129 DEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTL 188

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             M  +G  PD +TYN +I   CK G +  A  +++ M   G   + IT N+I+  L  +
Sbjct: 189 NKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDK 248

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
              ++A        ++G     ++Y  LI    +   A RAL++ ++M      P   TY
Sbjct: 249 GNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTY 308

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N+++   S+ GK E    ++  LL  GM P+  T+NT+IH   + G  ++       M E
Sbjct: 309 NSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNE 368

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
            S  P  VT NILL+GLC+ G+L++A+ F+ + + +  + D +TYNTL+S LCKE  +++
Sbjct: 369 TSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDE 428

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
              LL+ +      P   TY  +   L   G +E A++    MV+ G I           
Sbjct: 429 GIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGII----------- 477

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            P+EI  SS+++       C   + ++A ++ +E   K   I  + Y  ++ GL +++K
Sbjct: 478 -PDEITHSSLTWG-----FCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKK 530



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 187/383 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +TYN ++  L K G+L    DL+ DM   G  P+  TYN ++      G   +A
Sbjct: 195 GGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQA 254

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +       +    P + TY +LI   C       A  + ++M      PD+VTYN+L+N 
Sbjct: 255 VNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNL 314

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +   +I  L  HG++PNAVT+N +I      G  D+   I++ M E    P 
Sbjct: 315 TSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPT 374

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN L++  CK+G ++ A      M  +    + IT NT+L  LC E  +DE   LLN
Sbjct: 375 HVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLN 434

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                      V+Y  +I G  R      A +L+DEM ++ I+P   T++++ WG  ++ 
Sbjct: 435 LLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRAD 494

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A ++L E+         T +  +I G C + +V+ A+Q  + MV+    PD    +
Sbjct: 495 QLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYS 554

Query: 365 ILLSGLCREGILEKALKFFRSWI 387
            L+  +   G+L++A    ++ I
Sbjct: 555 ALIKAVADGGMLKEANDLHQTLI 577



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 176/358 (49%), Gaps = 1/358 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD +TYN+I+  LF KG  N+  +   D  ++G  P   TY +L+   CK      A
Sbjct: 230 GCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARA 289

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V++ M      PD+ TYN L+N     G  E+   +   + S  + P+ VTYNTLI+ 
Sbjct: 290 LEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHS 349

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   E   ++  ++E    P  VT+NI++   CK G +D+A      M     SPD
Sbjct: 350 LINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPD 409

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTL+   CK G ++E  ++++++         +T N ++  L     ++ A  L +
Sbjct: 410 IITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYD 469

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   DE+++ +L  G+ R ++   A +L  EM  ++       Y  +I GL +  
Sbjct: 470 EMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQK 529

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPDIV 361
           K + AI +L+ +++    PDE  ++ +I      G +++A   H  +++ K  K +I+
Sbjct: 530 KVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIKWKILKKEIM 587



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 15/157 (9%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C P  VTYN ++D L + G +   ++L  +M  +G++P+  T++ L  G+C+   L+
Sbjct: 438 GTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLE 497

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EA  ++  M+  +       Y  +I G C    ++ A ++   M   +  PD   Y+ LI
Sbjct: 498 EATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALI 557

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
               + G   EA  L               H  +IKW
Sbjct: 558 KAVADGGMLKEANDL---------------HQTLIKW 579


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 270/568 (47%), Gaps = 54/568 (9%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+P   TY +++ A  K+G + +      +M   G+  N      L++G+CK   L  A+
Sbjct: 299 CVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSAL 358

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M      P+  T+++LI  +   G +E+A    K+MESL L P V   +T+I  +
Sbjct: 359 DLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGW 418

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +  +  EA KL DE  E G+  N    N ++ W CK+GKIDKA +++R ME  G  P+ 
Sbjct: 419 LKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNV 477

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK---------------------------- 217
           V+YN ++ A+C+  NM+ A  +   M  KGLK                            
Sbjct: 478 VSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQ 537

Query: 218 -------MNTITLNTILHTLCCEKKLDEAYMLL-NSASKRGYYLDEVSYGTLITGYFRDE 269
                  +N +   TI++ LC   +  +A  LL N   ++ + +  +SY ++I G+ ++ 
Sbjct: 538 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEG 597

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           + + A+  ++EM    I P+  TY +++ GL ++ + +QA++M +E+   G+  D   + 
Sbjct: 598 EMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 657

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +IHGFC +  +E A    ++++E+   P     N L+SG    G +  AL  ++  +  
Sbjct: 658 ALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKD 717

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   D  TY TLI  L KE  L  A  L +EM+   L PD   Y  I   L + G+  + 
Sbjct: 718 GLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKV 777

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            K    M E  K N+             + P+ + Y+  I  H  +G   +A ++ +E  
Sbjct: 778 VK----MFEEMKKNN-------------VTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 820

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSISKA 537
            KGI  + +T+  L++G + + + I  A
Sbjct: 821 DKGILPDGATFDILVSGKVGKFQPIRAA 848



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 225/469 (47%), Gaps = 37/469 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P++VT++ +++   K G++ +  +    M+  GL P+    + ++ G+ K   
Sbjct: 364 MENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQK 423

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+++ D   +   L +V+  N +++  C  G +++A  L ++MES  + P+VV+YN 
Sbjct: 424 HEEALKLFDESFET-GLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNN 482

Query: 121 -----------------------------------LINRFFESGRSMEAFKLIDELDEHG 145
                                              LI+  F++       ++++++    
Sbjct: 483 VMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSN 542

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLIDANCKAGNMEEA 204
           I+ N V +  +I   CK G+  KA +++ NM EE  F   C++YN++ID   K G M+ A
Sbjct: 543 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYA 602

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
               + M   G+  N IT  +++  LC   ++D+A  + +    +G  LD  +YG LI G
Sbjct: 603 VAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHG 662

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + +      A  L+ E+ E  + PS   YN++I G    G    A+D+  ++L+ G+  D
Sbjct: 663 FCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 722

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+ T+I G   EG +  A   + +M      PD +   ++++GL ++G   K +K F 
Sbjct: 723 LGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFE 782

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
                    + + YN +I+   +E  L++AF L  EM +K + PD  T+
Sbjct: 783 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 831



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 253/562 (45%), Gaps = 53/562 (9%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G +P     N  L AL ++  + E ++L S M   G+  +  T  +L+    +     E
Sbjct: 191 LGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAE 250

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-LPDVVTYNTLI 122
           A+ V     +  + PD   Y++ +   C    L  A  L +EM+  KL +P   TY ++I
Sbjct: 251 ALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVI 310

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
               + G   +A +  DE+   GI  N V    +I  +CK   +  A  +   ME  G S
Sbjct: 311 LASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPS 370

Query: 183 PDCVTYNTLIDANCKAGNMEEA---FRMMDVMG---------------------RKGLKM 218
           P+ VT++ LI+   K G ME+A   ++ M+ +G                      + LK+
Sbjct: 371 PNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKL 430

Query: 219 ----------NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
                     N    NTIL  LC + K+D+A  LL     RG   + VSY  ++  + R 
Sbjct: 431 FDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRK 490

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +  + A  ++  M E+ + P+ +TY+ +I G  ++   +  ++++N++  S +  +   +
Sbjct: 491 KNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVY 550

Query: 329 NTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            TII+G C  GQ  KA +    M+ EK F    ++ N ++ G  +EG ++ A+  +    
Sbjct: 551 QTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMC 610

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G + + +TY +L+  LCK  R++ A  +  EM+ K +  D   Y A+     +   +E
Sbjct: 611 ANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNME 670

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            A    S ++E G                 ++PS   Y+  I+   + G    AL ++++
Sbjct: 671 SASALFSELLEEG-----------------LNPSQPVYNSLISGFRNLGNMVAALDLYKK 713

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
             + G+  +  TY  L++GL+K
Sbjct: 714 MLKDGLRCDLGTYTTLIDGLLK 735



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/505 (23%), Positives = 232/505 (45%), Gaps = 18/505 (3%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           V +L+   K  G   N   +N L++ Y K      A+ +V+ M +   +P V   N  ++
Sbjct: 146 VSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLS 205

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                  + EA  L   M ++ +  D  T   L+       +  EA ++     E G +P
Sbjct: 206 ALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEP 265

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS-PDCVTYNTLIDANCKAGNMEEAFRM 207
           +++ +++ ++  CK   +  A  ++R M+E     P   TY ++I A+ K GNME+A R 
Sbjct: 266 DSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRW 325

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
            D M   G+ MN +   +++   C    L  A  L       G   + V++  LI  + +
Sbjct: 326 KDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSK 385

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           + +  +AL+ + +M+   + PS F  + +I G  +  K E+A+ + +E  ++G+  +   
Sbjct: 386 NGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFI 444

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            NTI+   C +G+++KA +   KM  +   P++V+ N ++   CR+  ++ A   F + +
Sbjct: 445 CNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML 504

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            KG   ++ TY+ LI    K    ++   ++++M    +  +   Y  I   L + G+  
Sbjct: 505 EKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTS 564

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A++  + M+E  +                   S +SY+  I+    +G    A+  +EE
Sbjct: 565 KARELLANMIEEKRFC----------------VSCMSYNSIIDGFIKEGEMDYAVAAYEE 608

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
               GI+ N  TY +LM+GL K  +
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNR 633



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 172/341 (50%), Gaps = 1/341 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+N TY+ ++D  FK      V ++++ M    +  N   Y  +++G CK+G   +A
Sbjct: 507 GLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKA 566

Query: 65  MRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             ++  M + K       +YN +I+G+   G ++ A    +EM +  + P+V+TY +L++
Sbjct: 567 RELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMD 626

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++ R  +A ++ DE+   G+K +   +  +I  +CK+  ++ A  +   + E G +P
Sbjct: 627 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNP 686

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
               YN+LI      GNM  A  +   M + GL+ +  T  T++  L  E  L  A  L 
Sbjct: 687 SQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLY 746

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   DE+ Y  ++ G  +  +  + +K+++EMK+  + P+   YNA+I G  + 
Sbjct: 747 TEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 806

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           G  ++A  + +E+L  G++PD  TF+ ++ G   + Q  +A
Sbjct: 807 GNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRA 847



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 103/194 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D   Y  ++    KK  +     L S++ ++GL P++  YN L+SG+  LG 
Sbjct: 644 MKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGN 703

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +   M ++    D+ TY  LI+G    G L  A  L  EM+++ L+PD + Y  
Sbjct: 704 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTV 763

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N   + G+ ++  K+ +E+ ++ + PN + +N +I  + +EG +D+A ++   M + G
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823

Query: 181 FSPDCVTYNTLIDA 194
             PD  T++ L+  
Sbjct: 824 ILPDGATFDILVSG 837


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 158/563 (28%), Positives = 269/563 (47%), Gaps = 60/563 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + +  +YN ++  L + G   E   +   M  +GL P+  TY+ L+     LG 
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVA---LGR 239

Query: 61  LKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            ++   ++DL+ + ++L   P+++TY + I     AG +++A+ + K ME     PDVVT
Sbjct: 240 RRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVT 299

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  LI+    +G+  +A +L  ++     KP+ VT+  ++  +   G ++   +    ME
Sbjct: 300 YTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEME 359

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
            +G++PD VTY  L++A CK+G +++AF M+DVM  +G+  N  T NT++  L   ++LD
Sbjct: 360 ADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLD 419

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  L N+    G      SY   I  Y +     +AL  +++MK+R IMPS    NA +
Sbjct: 420 EALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASL 479

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           + L++ G+  +A D+ N++   G+ PD  T+N ++  +   GQ++KA +   +M+ +  +
Sbjct: 480 YSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCE 539

Query: 358 PDI-----------------------------------VTCNILLSGLCREGILEKALKF 382
           PDI                                   VT NIL++GL +EG L KAL  
Sbjct: 540 PDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDL 599

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F S    G   ++VT+N L+  LCK   ++ A  +   M      PD  TY  I   L++
Sbjct: 600 FGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIK 659

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            GR   A  F           HQ+         + + P  ++    +      GR +DA+
Sbjct: 660 EGRAGYAFWFY----------HQM--------KKFLSPDHVTLYTLLPGVVKDGRVEDAI 701

Query: 503 QIFEE-TRQKGIAINKSTYMNLM 524
           +I  E   Q G+  +   +  LM
Sbjct: 702 KIVMEFVHQSGLQTSNQVWGELM 724



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 260/549 (47%), Gaps = 23/549 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY   +  L + G++++   +L  M+ +G  P+  TY +L+   C  G 
Sbjct: 253 METLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGK 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +   M  +   PD+ TY  L++ + N G LE   R   EME+    PDVVTY  
Sbjct: 313 LDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTI 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    +SG+  +AF ++D +   GI PN  T+N +I       ++D+A ++  NME  G
Sbjct: 373 LVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P   +Y   ID   K G+ E+A    + M ++G+  +    N  L++L    ++ EA 
Sbjct: 433 VAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAK 492

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N     G   D V+Y  ++  Y +  + ++A KL  EM      P     N++I  L
Sbjct: 493 DIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTL 552

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ ++A  M   L    + P   T+N +I G   EG++ KAL     M E    P+ 
Sbjct: 553 YKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNT 612

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N LL  LC+   ++ ALK F    +   + D +TYNT+I  L KE R   AF    +
Sbjct: 613 VTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQ 672

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI--NHQVVQP--NTSKTPE 476
           M +K L PD  T   +   +V+ GR+E+A K     V    +  ++QV            
Sbjct: 673 M-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEA 731

Query: 477 EIDPSSISYSEK----------------INEHCSQGRYKDALQIFEE-TRQKGIAINKST 519
           EI+  +IS++E                 I   C Q +  DA ++F++ T+  G      +
Sbjct: 732 EIE-EAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPES 790

Query: 520 YMNLMNGLI 528
           Y  LM+GL+
Sbjct: 791 YNCLMDGLL 799



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 248/555 (44%), Gaps = 55/555 (9%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  VTYN ++  L K+GKL +  DL   MK+ G  PN  T+N L+   CK   +  A+++
Sbjct: 575  PTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKM 634

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
               MT     PDV TYN +I G    G    AF    +M+   L PD VT  TL+    +
Sbjct: 635  FCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVK 693

Query: 128  SGRSMEAFKLIDELDEH-------------------------------GIKPNAVTHN-- 154
             GR  +A K++ E                                   G+  N++  +  
Sbjct: 694  DGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDN 753

Query: 155  ---IMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
                +I+  CK+ K   A K+     ++ G  P   +YN L+D        E A ++   
Sbjct: 754  LILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVE 813

Query: 211  MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            M   G   N  T N +L      K++DE + L N    RG   + +++  +I+   +   
Sbjct: 814  MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873

Query: 271  ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
             N+AL L+ E+      P+  TY  +I GL ++G++E+A+ +  E+      P+   +N 
Sbjct: 874  INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933

Query: 331  IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
            +I+GF   G V  A     +M+++  +PD+ +  IL+  L   G ++ A+ +F    L G
Sbjct: 934  LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993

Query: 391  KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
               D+V+YN +I+ L K RRLE+A  L SEM+ + + P+ YTY A+      +G +++A 
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 451  KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
            K    +   G                 ++P+  +Y+  I  H   G    A  +F++   
Sbjct: 1054 KMFEELQFMG-----------------LEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMI 1096

Query: 511  KGIAINKSTYMNLMN 525
             G + N  T+  L N
Sbjct: 1097 VGCSPNAGTFAQLPN 1111



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 262/557 (47%), Gaps = 29/557 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD VTY  +++AL K GK+++  D+L  M+ +G+VPN  TYN L+SG   L  
Sbjct: 358 MEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRR 417

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ + + M      P  ++Y + I+ +   G  E+A    ++M+   ++P +   N 
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNA 477

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +    E GR  EA  + +++   G+ P++VT+N+M+K Y K G+IDKA K++  M   G
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +  N+LID   KAG ++EA++M   +    L    +T N ++  L  E KL +A 
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  + G   + V++  L+    +++  + ALK++  M      P   TYN +I+GL
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+   A    +++ +  + PD  T  T++ G   +G+VE A++   + V +S    +
Sbjct: 658 IKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQS---GL 713

Query: 361 VTCNI----LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            T N     L+  +  E  +E+A+ F    +      D      LI  LCK+++  DA  
Sbjct: 714 QTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKK 773

Query: 417 LLSEMEEKKLG--PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG------KINHQVVQ 468
           L  +   K LG  P   +Y  +   L+     E A K    M   G        N  +  
Sbjct: 774 LFDKFT-KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDA 832

Query: 469 PNTSKTPEEI------------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
              SK  +E+             P+ I+++  I+          AL ++ E      +  
Sbjct: 833 HGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPT 892

Query: 517 KSTYMNLMNGLIKRRKS 533
             TY  L+ GL+K  +S
Sbjct: 893 PCTYGPLIGGLLKAGRS 909



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 258/569 (45%), Gaps = 55/569 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G +P     N  L +L + G++ E +D+ +D+   GL P+  TYN+++  Y K G 
Sbjct: 463  MKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQ 522

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A +++  M      PD+   N LI+    AG ++EA+++   ++ LKL P VVTYN 
Sbjct: 523  IDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNI 582

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI    + G+ ++A  L   + E G  PN VT N ++   CK   +D A K+   M    
Sbjct: 583  LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN 642

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             SPD +TYNT+I    K G    AF     M +K L  + +TL T+L  +  + ++++A 
Sbjct: 643  CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAI 701

Query: 241  -MLLNSASKRGYYLDEVSYG-----------------------------------TLITG 264
             +++    + G       +G                                    LI  
Sbjct: 702  KIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRV 761

Query: 265  YFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              + +KA  A KL+D+  K     P+  +YN ++ GL     TE A+ +  E+  +G  P
Sbjct: 762  LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            +  T+N ++       ++++  + +N+M+ +  KP+I+T NI++S L +   + KAL  +
Sbjct: 822  NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               I    +    TY  LI  L K  R E+A  +  EM + +  P+   Y  +     ++
Sbjct: 882  YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941

Query: 444  GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            G +  A      M++ G                 I P   SY+  +      GR  DA+ 
Sbjct: 942  GNVNIACDLFKRMIKEG-----------------IRPDLKSYTILVECLFMTGRVDDAVH 984

Query: 504  IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             FEE +  G+  +  +Y  ++NGL K R+
Sbjct: 985  YFEELKLTGLDPDTVSYNLMINGLGKSRR 1013



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 248/522 (47%), Gaps = 25/522 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +L+ L   G++ ++  +   M+KQ +  N  TY  +       G +++A   +  M
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL---INRFFES 128
            Q   + + ++YN LI      G  +EA ++ K M S  L P + TY+ L   + R  ++
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G  M+   L++E++  G++PN  T+ I I+   + G+ID A  I++ ME+ G  PD VTY
Sbjct: 244 GTIMD---LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTY 300

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LIDA C AG +++A  +   M     K + +T  T++        L+      +    
Sbjct: 301 TVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEA 360

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            GY  D V+Y  L+    +  K ++A  + D M+ R I+P+  TYN +I GL    + ++
Sbjct: 361 DGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE 420

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++ N +   G+ P   ++   I  +   G  EKAL    KM ++   P I  CN  L 
Sbjct: 421 ALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            L   G + +A   F      G + DSVTYN ++    K  +++ A  LL+EM  +   P
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540

Query: 429 DRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           D     ++   L ++GR++EA Q F       G++              ++ P+ ++Y+ 
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQMF-------GRLKDL-----------KLAPTVVTYNI 582

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I     +G+   AL +F   ++ G   N  T+  L++ L K
Sbjct: 583 LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCK 624



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 165/327 (50%)

Query: 2    EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            +  G  P   +YN ++D L           L  +MK  G  PN  TYN+L+  + K   +
Sbjct: 780  KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839

Query: 62   KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             E   + + M      P++ T+N++I+    +  + +A  L  E+ S    P   TY  L
Sbjct: 840  DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPL 899

Query: 122  INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
            I    ++GRS EA K+ +E+ ++  KPN   +NI+I  + K G ++ AC + + M + G 
Sbjct: 900  IGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGI 959

Query: 182  SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             PD  +Y  L++     G +++A    + +   GL  +T++ N +++ L   ++L+EA  
Sbjct: 960  RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALS 1019

Query: 242  LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            L +    RG   +  +Y  LI  +      ++A K+++E++   + P+ FTYNA+I G S
Sbjct: 1020 LFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHS 1079

Query: 302  QSGKTEQAIDMLNELLQSGMIPDETTF 328
            +SG  ++A  +  +++  G  P+  TF
Sbjct: 1080 KSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 185/413 (44%), Gaps = 32/413 (7%)

Query: 131 SMEAFKLIDELDEHGIKPNAV----THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++  FK++ +L      PN V    T N M+++    G+++    +   M++   + +  
Sbjct: 105 ALSYFKMVSQL------PNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPN 158

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY T+  A    G + +A   +  M + G  +N  + N +++ L       EA  +    
Sbjct: 159 TYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRM 218

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G      +Y  L+    R       + L +EM+   + P+ +TY   I  L ++G+ 
Sbjct: 219 ISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRI 278

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A  +L  +   G  PD  T+  +I   C+ G+++KA + + KM   S KPD+VT   L
Sbjct: 279 DDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITL 338

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +S     G LE   +F+      G A D VTY  L+ +LCK  +++ AF +L  M  + +
Sbjct: 339 MSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGI 398

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+ +TY  + + L+   RL+EA +  + M   G                 + P++ SY 
Sbjct: 399 VPNLHTYNTLISGLLNLRRLDEALELFNNMESLG-----------------VAPTAYSYV 441

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGI-----AINKSTYMNLMNGLIKRRKSI 534
             I+ +   G  + AL  FE+ +++GI     A N S Y     G I+  K I
Sbjct: 442 LFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDI 494



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 185/430 (43%), Gaps = 22/430 (5%)

Query: 112 LPDVV----TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           LP++V    T N ++      GR  +   + D + +  I  N  T+  + K    +G I 
Sbjct: 115 LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIR 174

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A   +  M + GF  +  +YN LI    + G  +EA ++   M  +GLK +  T + ++
Sbjct: 175 QAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALM 234

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L   +       LL      G   +  +Y   I    R  + + A  +   M++    
Sbjct: 235 VALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCG 294

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P   TY  +I  L  +GK ++A ++  ++  S   PD  T+ T++  F + G +E   +F
Sbjct: 295 PDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRF 354

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            ++M    + PD+VT  IL+  LC+ G +++A        ++G   +  TYNTLIS L  
Sbjct: 355 WSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLN 414

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            RRL++A  L + ME   + P  Y+Y        + G  E+A      M + G       
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG------- 467

Query: 468 QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                     I PS  + +  +      GR ++A  IF +    G++ +  TY N+M   
Sbjct: 468 ----------IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTY-NMMMKC 516

Query: 528 IKRRKSISKA 537
             +   I KA
Sbjct: 517 YSKAGQIDKA 526



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 101/191 (52%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  + C P+   YN +++   K G +N   DL   M K+G+ P+  +Y ILV      G 
Sbjct: 919  MPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGR 978

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A+   + +      PD  +YN++ING   +  LEEA  L  EM++  + P++ TYN 
Sbjct: 979  VDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNA 1038

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI  F  +G   +A K+ +EL   G++PN  T+N +I+ + K G  D+A  + + M   G
Sbjct: 1039 LILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVG 1098

Query: 181  FSPDCVTYNTL 191
             SP+  T+  L
Sbjct: 1099 CSPNAGTFAQL 1109



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD V+YN +++ L K  +L E   L S+MK +G+ P   TYN L+  +   G + +A
Sbjct: 993  GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ + +      P+V+TYN LI G   +G  + AF + K+M  +   P+  T+  L N+
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G  P+  TYN ++      G +++   +  +++  GL PN  TYN L+ G+ K G 
Sbjct: 1024 MKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGN 1083

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
               A  V   M      P+  T+  L N
Sbjct: 1084 KDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 273/556 (49%), Gaps = 28/556 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL--VPNRTTYNILVSGYCKLGWLKEAM 65
           P+  +Y +++ AL K GK+++   +LSD+   GL        YN+L+   CK G + EA+
Sbjct: 227 PNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAI 286

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R+   M +++  P + T+ +LING   +    E   L +EME L + P+ V  N LI+  
Sbjct: 287 RLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWH 346

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G   EA +L DE+    +K  AVT+N++ +  CKEG++++A +I+  M   G +   
Sbjct: 347 CRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHS 406

Query: 186 VTYNTLIDANC-KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +N+++     + G +E   R++  M ++G+K N   +      LC  ++  EA  +  
Sbjct: 407 GLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWL 466

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G  ++  +   LI G    +    A ++   M  + +     TYN MI G  +  
Sbjct: 467 KMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDS 526

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+A+ + +++++ G  PD   FN+IIH +C  G++E+AL    +M  +  +PD+V+  
Sbjct: 527 KIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYG 586

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+   ++KA ++    +  G   ++V YN LI    +   +  A G+L  ME  
Sbjct: 587 TIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESI 646

Query: 425 KLGPDRYTYAAI-----HTALVESGR--LEEAQKFTSIMVETGKINHQVVQPNTSKT--- 474
            + P   TY ++     H  LV+  +   E+++K +   +E G + + ++     K    
Sbjct: 647 GIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNS---IEVGVVGYTIMIQGLCKIGKM 703

Query: 475 -----------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P+ I+Y+  +  +C  G  ++A ++F+E    GI  +  +Y  L
Sbjct: 704 DEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTL 763

Query: 524 MNGLIKRRKSISKAVD 539
           + G   +  S+ KA++
Sbjct: 764 VTGF-SQVDSLDKAIE 778



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 252/526 (47%), Gaps = 21/526 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           P   T N +L+AL + G L     +  +M+  + + PN  +Y  ++   CK+G + +  +
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFK 250

Query: 67  VV-DLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++ DL+    +       YN+L++  C +G ++EA RL+  ME  ++ P +VT+  LIN 
Sbjct: 251 ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILING 310

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              S R  E   L+ E++  GI PN V  N +I W+C++G   +A ++   M        
Sbjct: 311 LKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKST 370

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK-KLDEAYMLL 243
            VTYN +  A CK G ME A R+++ M   G+ +++   N+++  L     +L+    L+
Sbjct: 371 AVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLI 430

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   KRG   ++           +  +   A+ +W +M E+ +  +  T NA+I GL + 
Sbjct: 431 SEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEG 490

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
              + A ++L  ++  GM  D  T+N +I G C + ++E+AL+  + M+ K FKPD    
Sbjct: 491 KNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMF 550

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++   C  G +E+AL       ++G   D V+Y T+I   CK + ++ A   L+E+  
Sbjct: 551 NSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMA 610

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             L P+   Y A+      +G +  A      M   G                 I P+++
Sbjct: 611 CGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIG-----------------IQPTNV 653

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +Y   ++  C  G   +A  +FE++R+  I +    Y  ++ GL K
Sbjct: 654 TYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCK 699



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 240/515 (46%), Gaps = 42/515 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     P  VT+  +++ L +  +  EV  LL +M+  G+ PN    N L+  +C+ G 
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+R+ D M   +      TYN++    C  G +E A R+ +EM S  +      +N+
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411

Query: 121 LINRFFE-SGRSMEAFKLIDELDEHGIKPN------------------------------ 149
           ++    + +GR     +LI E+ + G+KPN                              
Sbjct: 412 VVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEK 471

Query: 150 -----AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
                  T N +I   C+   +  A +++R M   G   D +TYN +I   CK   +EEA
Sbjct: 472 GLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEA 531

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            ++ D M RKG K +    N+I+H  C   K++EA  LL      G   D VSYGT+I G
Sbjct: 532 LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           Y + +   +A +  +E+    + P+   YNA+I G  ++G    AI +L+ +   G+ P 
Sbjct: 592 YCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPT 651

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+ +++H  C  G V++A     +  + S +  +V   I++ GLC+ G +++A+ +F 
Sbjct: 652 NVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFE 711

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +    + +TY TL+ + CK    E+A  L  EM    + PD  +Y  + T   +  
Sbjct: 712 EMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVD 771

Query: 445 RL----EEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            L    E+A + +SIM +   +++ +V  N   TP
Sbjct: 772 SLDKAIEKAAEISSIMTQNDCLDNVLV--NRITTP 804



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 222/499 (44%), Gaps = 60/499 (12%)

Query: 82  TYNMLINGWCNA---GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           + ++LIN    +   G L  A      + S +  P V T N L+     +G      K+ 
Sbjct: 157 SSDLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVF 216

Query: 139 DEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF--SPDCVTYNTLIDAN 195
           DE+ D   + PN  ++  MIK  CK GK+D   KI+ ++   G   S   V YN L+DA 
Sbjct: 217 DEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDAL 276

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK+G ++EA R+   M    +  + +T   +++ L    +  E   LL      G   +E
Sbjct: 277 CKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNE 336

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V    LI  + R      A++L+DEM  +++  +  TYN +   L + G+ E+A  +L E
Sbjct: 337 VICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEE 396

Query: 316 LLQSGMIPDETTFNTIIHGFCSE-GQVEKALQFHNKMVEKSFKP---------------- 358
           +L +GM      FN+++ G     G++E  ++  ++MV++  KP                
Sbjct: 397 MLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGR 456

Query: 359 -------------------DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
                              +I T N L+ GLC    ++ A +  R+ + KG  +D++TYN
Sbjct: 457 RHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYN 516

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            +I   CK+ ++E+A  L  +M  K   PD Y + +I  A  + G++EEA          
Sbjct: 517 IMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHL------L 570

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G++  + VQP+            +SY   I+ +C     + A +   E    G+  N   
Sbjct: 571 GQMKIEGVQPDV-----------VSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVI 619

Query: 520 YMNLMNGLIKRRKSISKAV 538
           Y  L+ G   R  +IS A+
Sbjct: 620 YNALIGGY-GRNGNISGAI 637


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 255/503 (50%), Gaps = 28/503 (5%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           LL  +++ G+ P+    N ++S       L EA+ +   +       +V +YN+L+   C
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALC 270

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
           +AG +++A +L  EM S    PDVVTY  LI+     G    A KL+DE+   G++PNA 
Sbjct: 271 DAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +  ++   C +G I  A ++V +M +     D   Y T++   C  G++  A R  D M
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            RKGL  + +T  T+++ LC   +L+EA  LL     R   +DEV+Y  LI GY +  K 
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             A ++ + M +R + P+  TY A+  GL + G  + A ++L+E+   G+  +  T+N++
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 507

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G C  G +E+A++    M     KPD+ T   L+  LC+ G L++A    +  + KG 
Sbjct: 508 INGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGI 567

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
               VTYN L++  C   R+E    LL  M EK + P+    AA + +L++   +E   K
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPN----AATYNSLMKQYCIENNMK 623

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
            T+          ++ +   S+   ++ P+  +Y+  I  HC     K+AL   +E  QK
Sbjct: 624 STT----------EIYKGMRSR---DVGPNENTYNILIKGHCKARNMKEALYFHDEMIQK 670

Query: 512 GIAINKSTYMNLMNGLIKRRKSI 534
           G  +  ++Y  L+  L K++K +
Sbjct: 671 GFRLTATSYSALIRLLNKKKKFV 693



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 222/426 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++      G+L     LL +M   G+ PN T Y  +V+  C  GW+ +A+RV
Sbjct: 289 PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRV 348

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M Q K + D   Y  +++G+CN G L  A R   EM+   L  D VTY T+IN    
Sbjct: 349 VEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCR 408

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +    EA KL+ E+    +  + VT+ ++I  YCK GK+ +A ++   M + G +P+ VT
Sbjct: 409 AVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVT 468

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L D  CK G+++ A  ++  M  KGL++N  T N++++ LC    L++A   +    
Sbjct: 469 YTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMD 528

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 D  +Y TLI    +    +RA  L  EM ++ I P+  TYN ++ G   SG+ E
Sbjct: 529 TACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 588

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L+ +L+  + P+  T+N+++  +C E  ++   + +  M  +   P+  T NIL+
Sbjct: 589 GGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILI 648

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   +++AL F    I KG  + + +Y+ LI  L K+++  +A  L  +M ++ L 
Sbjct: 649 KGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLT 708

Query: 428 PDRYTY 433
            +   Y
Sbjct: 709 AESDVY 714



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 236/462 (51%), Gaps = 5/462 (1%)

Query: 1   MEGFGCLPD-NV-TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           +E F  LP  NV +YN +L AL   G++ + R L  +M      P+  TY IL+ G+C L
Sbjct: 248 IELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCAL 304

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L+ A++++D M      P+   Y  ++   C+ G + +A R+ ++M   K++ D   Y
Sbjct: 305 GELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALY 364

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            T+++ F   G  + A +  DE+   G+  + VT+  MI   C+  ++++A K+++ M  
Sbjct: 365 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWA 424

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
                D VTY  LID  CK G M EAF+M + M ++G+  N +T   +   LC +  +  
Sbjct: 425 RRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQA 484

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  LL+  S +G  L+  +Y +LI G  +     +A++   +M    + P  +TY  +I 
Sbjct: 485 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLID 544

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L +SG  ++A  +L E+L  G+ P   T+N +++GFC  G+VE   +  + M+EK+  P
Sbjct: 545 ALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHP 604

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +  T N L+   C E  ++   + ++    +    +  TYN LI   CK R +++A    
Sbjct: 605 NAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFH 664

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EM +K       +Y+A+   L +  +  EA++    M + G
Sbjct: 665 DEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEG 706



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 150/285 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY  + D L K+G +    +LL +M  +GL  N  TYN L++G CK G+L++A
Sbjct: 461 GVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQA 520

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           MR +  M      PDV+TY  LI+  C +G L+ A  L +EM    + P +VTYN L+N 
Sbjct: 521 MRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNG 580

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SGR     KL+D + E  I PNA T+N ++K YC E  +    +I + M      P+
Sbjct: 581 FCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPN 640

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI  +CKA NM+EA    D M +KG ++   + + ++  L  +KK  EA  L +
Sbjct: 641 ENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFH 700

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
              K G   +   Y   I   F ++     L L DE+ E  I+ S
Sbjct: 701 DMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASIVKS 745



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 181/356 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VTY T+++ L +  +L E   LL +M  + L  +  TY +L+ GYCK G 
Sbjct: 387 MQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGK 446

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA ++ + M Q    P+V TY  L +G C  G ++ A  L  EM +  L  +  TYN+
Sbjct: 447 MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 506

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   ++G   +A + + ++D   +KP+  T+  +I   CK G +D+A  +++ M + G
Sbjct: 507 LINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYN L++  C +G +E   +++D M  K +  N  T N+++   C E  +    
Sbjct: 567 IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTT 626

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      R    +E +Y  LI G+ +      AL   DEM ++    +  +Y+A+I  L
Sbjct: 627 EIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLL 686

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           ++  K  +A ++ +++ + G+  +   ++  I    +E  +E  L   +++VE S 
Sbjct: 687 NKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 163/315 (51%), Gaps = 2/315 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D VTY  ++D   K+GK+ E   + + M ++G+ PN  TY  L  G CK G ++ A  ++
Sbjct: 430 DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL 489

Query: 69  DLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             M+ NK L  +  TYN LING C AG LE+A R   +M++  L PDV TY TLI+   +
Sbjct: 490 HEMS-NKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCK 548

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG    A  L+ E+ + GIKP  VT+N+++  +C  G+++   K++  M E    P+  T
Sbjct: 549 SGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAAT 608

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+L+   C   NM+    +   M  + +  N  T N ++   C  + + EA    +   
Sbjct: 609 YNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMI 668

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G+ L   SY  LI    + +K   A +L+ +M++  +   +  Y+  I         E
Sbjct: 669 QKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLE 728

Query: 308 QAIDMLNELLQSGMI 322
             + + +EL+++ ++
Sbjct: 729 STLALCDELVEASIV 743



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 28/186 (15%)

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           ++ +    P    CN +LS L     L++A++ F+    K    +  +YN L+ +LC   
Sbjct: 222 RLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALCDAG 273

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R++DA  L  EM      PD  TY  +       G LE A K    MV  G         
Sbjct: 274 RVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGG--------- 321

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   ++P++  Y+  +   C +G   DAL++ E+  Q+ + ++++ Y  +++G   
Sbjct: 322 --------VEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCN 373

Query: 530 RRKSIS 535
           +   +S
Sbjct: 374 KGDLVS 379


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 227/425 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  FGC PD V+YN +L  L    + ++V +L+ +M + G  PN  T+N L++  C+ G 
Sbjct: 204 LPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGL 263

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++    +  M ++   PD+  Y  +I+G C  G  E A  +   M S  L P+VV YNT
Sbjct: 264 FEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNT 323

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     + R  EA  L+ E+ +     + VT NI++ ++C+ G +D+  +++  M E+G
Sbjct: 324 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 383

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY T+I+  CK G ++EA  ++  M   G K NTI+   +L  LC  ++  +A 
Sbjct: 384 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQ 443

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++   ++G   + V++ TLI    +     +A++L  +M      P   +Y+ +I GL
Sbjct: 444 ELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 503

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GKTE+A+++LN ++  G+ P+   ++++      EG+ +K +Q  + + + + + D 
Sbjct: 504 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDA 563

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N ++S LC+    ++A+ FF   +  G   +  TY  LI  L  E  + +A  LLSE
Sbjct: 564 ALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSE 623

Query: 421 MEEKK 425
           +  ++
Sbjct: 624 LCSRR 628



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 258/521 (49%), Gaps = 19/521 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  I+ +L  +G + +   +L +M  +G        ++++   C+ G  + A+R 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + ++       D    N++++  C  G ++E   L +++ S    PD+V+YN ++     
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +L+ E+   G  PN  T N +I + C+ G  ++  + +  M E+G +PD   
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y T+ID  CK G+ E A  ++  M   GLK N +  NT+L  LC  ++ +EA  LL    
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +    LD+V++  L+  + ++   +R ++L ++M E   +P   TY  +I G  + G  +
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L  +   G  P+  ++  ++ G C   +   A +  + M+++   P+ VT N L+
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + +C++G++E+A++  +  ++ G + D ++Y+T+I  L K  + E+A  LL+ M  K + 
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525

Query: 428 PDRYTYAAIHTALVESGRLEE-AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
           P+   Y+++ +AL   GR ++  Q F SI   T + +  +                  Y+
Sbjct: 526 PNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAAL------------------YN 567

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I+  C +     A+  F      G   N+STY  L+ GL
Sbjct: 568 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 608



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 228/464 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  D+   N ++ A+ ++G ++E  +LL  +   G  P+  +YN ++ G C      + 
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +    P+V T+N LI   C  G+ E+      +M      PD+  Y T+I+ 
Sbjct: 233 EELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDG 292

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A  ++  +  +G+KPN V +N ++K  C   + ++A  ++  M +     D
Sbjct: 293 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 352

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N L+D  C+ G ++    +++ M   G   + IT  T+++  C E  +DEA MLL 
Sbjct: 353 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 412

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S  G   + +SY  ++ G  R E+   A +L   M ++  +P+  T+N +I  + + G
Sbjct: 413 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 472

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             EQAI++L ++L +G  PD  +++T+I G    G+ E+AL+  N M+ K   P+ +  +
Sbjct: 473 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYS 532

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            + S L REG  +K ++ F S        D+  YN +ISSLCK    + A    + M   
Sbjct: 533 SMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN 592

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
              P+  TY  +   L   G + EAQ   S +     +   +V+
Sbjct: 593 GCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVR 636



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/503 (23%), Positives = 228/503 (45%), Gaps = 20/503 (3%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D    +   G       YN +++GYC+ G +  A R+   +      P+ +TY  ++   
Sbjct: 62  DAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP---PNAYTYFPIVRSL 118

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C  G++ +A  +  EM            + ++      G    A + +  L   G   ++
Sbjct: 119 CARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDS 178

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
              N+++   C++G +D+  +++R +   G  PD V+YN ++   C A   ++   +M  
Sbjct: 179 GNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVE 238

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M R G   N  T NT++  LC     ++ +  L+   + G   D   Y T+I G  +D  
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A  +   M    + P+   YN ++ GL  + + E+A D+L E+ Q     D+ TFN 
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++  FC  G V++ ++   +M+E    PD++T   +++G C+EG++++A+   ++    G
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              ++++Y  ++  LC+  R  DA  L+S M ++   P+  T+  +   + + G +E+A 
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +    M+  G                   P  ISYS  I+     G+ ++AL++      
Sbjct: 479 ELLKQMLVNG-----------------CSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 521

Query: 511 KGIAINKSTYMNLMNGLIKRRKS 533
           KGI  N   Y ++ + L +  ++
Sbjct: 522 KGITPNTIIYSSMASALSREGRT 544



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/483 (22%), Positives = 220/483 (45%), Gaps = 23/483 (4%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L+   C  G   +A R +D          V  YN +I G+C AG   +    R+   ++ 
Sbjct: 50  LIRSLCAAGRTADAARALDTAGDAAG---VVAYNAMIAGYCRAG---QVAAARRLAAAVP 103

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + P+  TY  ++      G   +A  ++DE+   G        +++++  C+ G    A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           + ++ +   G + D    N ++ A C+ G ++E   ++  +   G + + ++ N +L  L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C  K+ D+   L+    + G   +  ++ TLI    R+    +  +   +M E    P  
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             Y  +I G+ + G  E A D+L+ +   G+ P+   +NT++ G CS  + E+A     +
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M ++    D VT NIL+   C+ G++++ ++     +  G   D +TY T+I+  CKE  
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
           +++A  LL  M      P+  +Y  +   L  + R  +AQ+  S M++ G +        
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCL-------- 455

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                    P+ ++++  IN  C +G  + A+++ ++    G + +  +Y  +++GL K 
Sbjct: 456 ---------PNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 506

Query: 531 RKS 533
            K+
Sbjct: 507 GKT 509


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 262/560 (46%), Gaps = 32/560 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ F C PD  TYNT+L  + +K  +     + + M K   +PN  T++IL+ G CK G 
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+++ D MTQ + LP+  TY ++I+G C A   + A+RL   M+    +PD VTYN 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F + GR  EA  L+   ++     +   ++ +I    +  + + A    R M E+ 
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD + Y  ++    KAG  ++A R+++ M  +GL  +T   N ++   C    LDEA 
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    SK   +    +Y  LI G  R      A ++++EM++    PS  T+NA+I G 
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451

Query: 301 SQSGKTEQAIDMLNELLQSGMIP--------------DETTFNTIIHGFCSEGQVEKALQ 346
            ++G  E+A  +L   ++ G  P              D  +  T++   C  G + KA  
Sbjct: 452 CKAGNIEKA-QLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYN 510

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              ++ +  F P+I+T NIL+ G C+ G +  A K F+   LKG + DSVTY TLI+ L 
Sbjct: 511 ILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLL 570

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-----QKFTSIMVETGK 461
              R EDAF +L ++ +    P    Y +  T      ++  A     +   SI     +
Sbjct: 571 SANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSE 630

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEH------------CSQGRYKDALQIFEETR 509
           +   V +       EE     +    K+N+             C  GR ++AL+IF    
Sbjct: 631 VLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLE 690

Query: 510 QKGIAINKSTYMNLMNGLIK 529
           +  + +   + + L+  L+K
Sbjct: 691 EHNVLVTPPSCVKLIYRLLK 710



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 241/518 (46%), Gaps = 39/518 (7%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V++N I+D L K         +L ++K+ G   +   + +L+  Y K+  +++A+   ++
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      PDV+TYN +++      ++  A  +   M  L  LP++ T++ LI+   +SG+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           +  A ++ DE+ +  I PN +T+ I+I   C+  K D A ++   M+++G  PD VTYN 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+   CK G                                   ++DEA  LL    K  
Sbjct: 272 LLHGFCKLG-----------------------------------RVDEALGLLKYFEKDR 296

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           Y LD+  Y  LI G FR  +   A   + +M E  I P    Y  M+ GLS++GK + A+
Sbjct: 297 YVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDAL 356

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +LNE+ + G++PD   +N +I G+C  G +++A   H ++ +        T  IL+ G+
Sbjct: 357 RLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGM 416

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G++  A + F      G     VT+N LI   CK   +E A  L  +ME   +G + 
Sbjct: 417 CRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKME---IGRNP 473

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             +  +             Q     + ++G I  +        T     P+ I+Y+  I+
Sbjct: 474 SLFLRLSQGANRVLDTASLQTMVEQLCDSGLI-LKAYNILMQLTDSGFAPNIITYNILIH 532

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
             C  G    A ++F+E + KG++ +  TY  L+NGL+
Sbjct: 533 GFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLL 570



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 193/413 (46%), Gaps = 49/413 (11%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD + Y  ++  L K GK  +   LL++M ++GLVP+   YN L+ GYC LG L EA  +
Sbjct: 334 PDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSL 393

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +++N       TY +LI G C +G++ +A ++  EME     P VVT+N LI+ F +
Sbjct: 394 HLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCK 453

Query: 128 SGRSMEAFKLIDELDEHGIKP--------------NAVTHNIMIKWYCKEGKIDKACKIV 173
           +G ++E  +L+    E G  P              +  +   M++  C  G I KA  I+
Sbjct: 454 AG-NIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNIL 512

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
             + ++GF+P+ +TYN LI   CKAGN+  AF++   +  KGL  +++T  T+++ L   
Sbjct: 513 MQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSA 572

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW--------------- 278
            + ++A+ +L+   K G       Y + +T   R  K   A  LW               
Sbjct: 573 NREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVL 632

Query: 279 ---------DEMKE--RQIMPSTFTYNAM------IW--GLSQSGKTEQAIDMLNELLQS 319
                     E++E  R ++   F  N        IW  GL Q+G+ E+A+ +   L + 
Sbjct: 633 KSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEH 692

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            ++    +   +I+     G ++ A +     ++K +      CN LL  L R
Sbjct: 693 NVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLR 745



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 144/330 (43%), Gaps = 48/330 (14%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-----------KQGL--VPNRTT 47
           ME  GC P  VT+N ++D   K G + + + L   M+            QG   V +  +
Sbjct: 432 MEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTAS 491

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
              +V   C  G + +A  ++  +T +   P++ TYN+LI+G+C AG +  AF+L KE++
Sbjct: 492 LQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQ 551

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
              L PD VTY TLIN    + R  +AF ++D++ ++G  P    +   + W C+  KI 
Sbjct: 552 LKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKIT 611

Query: 168 KA---------------CKIVRNMEEN---GFSPDCV----------------TYNTLID 193
            A                ++++++EEN   G   + V                 Y   + 
Sbjct: 612 LAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLI 671

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C+AG +EEA ++   +    + +   +   +++ L     LD A  +      +GY L
Sbjct: 672 GLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYML 731

Query: 254 DEVSYGTLITGYFRDE-KANRALKLWDEMK 282
                  L+    R E K NRA  L   MK
Sbjct: 732 MPRICNRLLKSLLRSEDKRNRAFDLLSRMK 761



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 111/244 (45%), Gaps = 17/244 (6%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           S  ++N +I  L +    E    +L E+ + G       F  +I  +     +EKA++  
Sbjct: 90  SWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESF 149

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             M +   KPD+ T N +L  + R+ ++  AL  +   +      +  T++ LI  +CK 
Sbjct: 150 EMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKS 209

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            + ++A  +  EM ++++ P++ TY  I + L ++ + + A +    M + G I      
Sbjct: 210 GKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCI------ 263

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P S++Y+  ++  C  GR  +AL + +   +    ++K  Y  L++GL 
Sbjct: 264 -----------PDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLF 312

Query: 529 KRRK 532
           + R+
Sbjct: 313 RARR 316



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 17/173 (9%)

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+ N+++  L ++   E   +  +     G ++ +  +  LI +  K   +E A      
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M++    PD +TY  +   +V             +++  G I +++++ N         P
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRK---------EVVLLALG-IYNRMLKLNCL-------P 194

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +  ++S  I+  C  G+ ++ALQ+F+E  Q+ I  NK TY  +++GL + +K+
Sbjct: 195 NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKA 247


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 224/426 (52%), Gaps = 1/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            +G G  PD  ++  ++    ++G+  E   LL+ M ++G   +  T  ++V  +C+ G 
Sbjct: 172 FDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGR 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++   +   M +  + P+V  Y   ++G C  G +++AF + +EM    L P+V T+ +
Sbjct: 232 FRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTS 291

Query: 121 LINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LI+   + G +  AF+L  +L      KPN  T+ +MI  YCKEGK+ +A  ++  M E 
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +P+  TY TLID +C+ G+ + AF +M+ M  +G   N  T N I+   C + K+ +A
Sbjct: 352 GLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQA 411

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           Y +L  A+ +G   D+V+Y  LIT + +      AL L+++M E    P   TY  +I  
Sbjct: 412 YKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAM 471

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             Q  + EQ+  + ++ L  G++P + T+ ++I G+C  G+   AL+   +MV+    PD
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPD 531

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +T   L+SGLC+E  LE+A   F + + K      VT  TL    C+  +   A   L 
Sbjct: 532 PITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLD 591

Query: 420 EMEEKK 425
            +++++
Sbjct: 592 GLDKRQ 597



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 232/518 (44%), Gaps = 20/518 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYN-ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           +L E  D+L +++  GL     T N +L  G  +      A +  D M      PD  ++
Sbjct: 128 RLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMGVR---PDARSF 184

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
             L+ G C  G  EEA  L   M       D  T   ++  F   GR  +   L   + E
Sbjct: 185 RALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVE 244

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G  PN V +   +   CK G + +A  ++  M   G  P+  T+ +LID  CK G  E 
Sbjct: 245 MGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTER 304

Query: 204 AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+ + ++     K N  T   ++   C E KL  A MLL    ++G   +  +Y TLI
Sbjct: 305 AFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLI 364

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ R    +RA +L ++MK    +P+ +TYNA+I G  + GK +QA  +L      G+ 
Sbjct: 365 DGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLC 424

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD+ T+  +I   C +G +  AL   N+M E S  PDI T   +++  C++  +E++ + 
Sbjct: 425 PDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQL 484

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   +  G      TY ++I+  C+  +   A  +   M +    PD  TY A+ + L +
Sbjct: 485 FDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCK 544

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS------EKINEHCSQG 496
             RLEEA+     M++   +   V     +      D ++I+ S      ++   H +  
Sbjct: 545 ESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADA 604

Query: 497 RYK--------DALQIF-EETRQKGIAINKSTYMNLMN 525
             +        DA  +F +    K  A++ +TY + +N
Sbjct: 605 LVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFIN 642



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 196/431 (45%), Gaps = 53/431 (12%)

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
           R+  + + + PD  ++  L+    + GR  EA  L+  +   G   ++ T  ++++ +C+
Sbjct: 169 RQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCR 228

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
           +G+      +   M E G  P+ V Y   +D  CK G +++AF +++ M  KGLK N  T
Sbjct: 229 QGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYT 288

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM- 281
             +++  LC                K G+                     RA +L+ ++ 
Sbjct: 289 HTSLIDGLC----------------KIGW-------------------TERAFRLFLKLV 313

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           K     P+  TY  MI G  + GK  +A  +L  +++ G+ P+  T+ T+I G C  G  
Sbjct: 314 KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSF 373

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           ++A +  NKM  + F P+I T N ++ G C++G +++A K  R    +G   D VTY  L
Sbjct: 374 DRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTML 433

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I+  CK+  +  A  L ++M E    PD  TY  I     +  ++E++Q+     +  G 
Sbjct: 434 ITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGL 493

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           +                 P+  +Y+  I  +C  G+   AL++FE   Q G   +  TY 
Sbjct: 494 V-----------------PTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYG 536

Query: 522 NLMNGLIKRRK 532
            L++GL K  +
Sbjct: 537 ALISGLCKESR 547



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 186/412 (45%), Gaps = 24/412 (5%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG--KIDKACKIVRNMEENGFSPD 184
           E+ R  EA  ++ EL  HG+     T N    W  + G  +        +  +  G  PD
Sbjct: 125 ETNRLREATDMLLELRSHGLPLVVETAN----WVLRVGLRQRHHFAHARQAFDGMGVRPD 180

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             ++  L+   C+ G  EEA  ++  M R+G  +++ T   ++   C + +  +   L  
Sbjct: 181 ARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFG 240

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + V+Y   + G  +     +A  + +EM  + + P+ +T+ ++I GL + G
Sbjct: 241 RMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300

Query: 305 KTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            TE+A  +  +L++S    P+  T+  +I G+C EG++ +A     +MVE+   P+  T 
Sbjct: 301 WTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ G CR G  ++A +      L+G   +  TYN +I   CK+ +++ A+ +L     
Sbjct: 361 TTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATS 420

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + L PD+ TY  + T   + G +  A    + M E                     P   
Sbjct: 421 QGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAE-----------------NSCHPDID 463

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           +Y+  I  +C Q + + + Q+F++    G+   K TY +++ G  +  KS S
Sbjct: 464 TYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTS 515



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 7/143 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GCLPD +TY  ++  L K+ +L E R L   M  + +VP   T   L   YC+   
Sbjct: 523 MVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDK 582

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+  +D + + +        + L+        L+ A    K +       D  TY +
Sbjct: 583 TTIAVSFLDGLDKRQQ---AHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTS 639

Query: 121 LINRFFESGRSMEAFKLIDELDE 143
            IN  +ES R    + L  E+ E
Sbjct: 640 FINSCYESNR----YALASEISE 658


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 244/520 (46%), Gaps = 17/520 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C PD VTYN +LD   K G  NE  ++L +M+  G +PN  TYN L+S + + G 
Sbjct: 214 MKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGL 273

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  + D M      PDV+TY  L++ +  AG +E+A  +  +M +    P+  T+N 
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNA 333

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    ++    E   + +++   G++P+ VT N ++  + K G   +  K+ R M++ G
Sbjct: 334 LIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAG 393

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD  T+N LI+A  + G+ ++A  + D M + G   +  T NT+L  L  E + + A 
Sbjct: 394 FEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAE 453

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++L+  ++  Y  ++++Y +++  Y    +  +  ++ D +    +  +       +   
Sbjct: 454 LILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVY 513

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+    ++A D    +   G + D +TFN +I  +  +G ++KA      +     +PD+
Sbjct: 514 SKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDV 573

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L+    REG+  K     R  +  G+  D V+YNT+I S  K  +L  A  +  E
Sbjct: 574 VTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHE 633

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    + PD +TY       V  G   EA      M +TG                   P
Sbjct: 634 MVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTG-----------------CKP 676

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             ++Y   ++ +C  G++++  +I +  +      +K+ Y
Sbjct: 677 DEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAY 716



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 258/566 (45%), Gaps = 55/566 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNE-VRDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           M+  G  P  VTYN I+D   KKG+  E + +L  +MK QG+ P+  TYN  ++  C  G
Sbjct: 143 MKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITA-CASG 201

Query: 60  WL-KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
            L +EA  +   M  +   PD  TYN L++ +  AG   EA  + KEMES   LP++VTY
Sbjct: 202 SLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTY 261

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N L++ F  +G    A ++ D +   GI+P+  T+  ++  Y + GK+++A +I   M  
Sbjct: 262 NELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRT 321

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +  +P+  T+N LI  + K  N  E   + + M   G++ + +T N++L          E
Sbjct: 322 SNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSE 381

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              +     K G+  D+ ++  LI  Y R   +++AL ++D M +    P   T+N ++ 
Sbjct: 382 VLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLA 441

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF----------H 348
            L++ G+ E A  +L+EL +S   P++  + +++H + + G++EK  +            
Sbjct: 442 ALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPF 501

Query: 349 NKMVEKSFK-------------------------PDIVTCNILLSGLCREGILEKALKFF 383
            K++ K+F                           D  T N ++S   ++G+++KA   F
Sbjct: 502 TKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTF 561

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                 G   D VTYN L+    +E         L E       PD  +Y  +  +  + 
Sbjct: 562 ALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKH 621

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G+L  A +    MV  G                 I P S +Y+  +  + + G + +AL 
Sbjct: 622 GQLSSATRIFHEMVSNG-----------------IQPDSFTYNTFVGCYVNGGMFPEALS 664

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           + +   + G   ++ TY  L++   K
Sbjct: 665 VVKHMHKTGCKPDEVTYRTLVDAYCK 690



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 240/533 (45%), Gaps = 54/533 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VT   +L  L ++ +L  V  L   ++++G   +   Y  L+S   +    KEA+  
Sbjct: 80  PDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGF 139

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGM-LEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            + M +    P + TYN++I+ +   G   E    L +EM++  + PD  TYNT I    
Sbjct: 140 FEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACA 199

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
                 EA +L  ++      P+ VT+N ++  Y K G  ++A  +++ ME  G  P+ V
Sbjct: 200 SGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIV 259

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN L+ A  +AG    A  M D M  KG++ +  T                        
Sbjct: 260 TYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFT------------------------ 295

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                      Y +L++ Y R  K  +A++++++M+     P++FT+NA+I    ++   
Sbjct: 296 -----------YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNF 344

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            + + +  ++   G+ PD  T+N+++  F   G   + L+    M +  F+PD  T NIL
Sbjct: 345 SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNIL 404

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +    R G  ++AL  +   +  G   D  T+NTL+++L +E R E A  +L E+     
Sbjct: 405 IEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSY 464

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+   YA++  A    G LE+ ++    MV+T    H +  P T      +    + YS
Sbjct: 465 KPNDIAYASMLHAYANGGELEKLKE----MVDT---LHTIYVPFTKIL---LKTFVLVYS 514

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +     CS     +A   F   R  G   + ST+ N M  +  ++  + KA D
Sbjct: 515 K-----CSL--VDEAEDAFLAMRHHGYLSDTSTF-NAMISMYGKKGMMDKATD 559



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 18/315 (5%)

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + + +T+  +L  L  E +L     L  S  + GY LD  +Y +LI+   R+ K   AL
Sbjct: 78  FRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEAL 137

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKT-EQAIDMLNELLQSGMIPDETTFNTIIHG 334
             +++MKE    PS  TYN +I    + G++ E  +++  E+   G+ PDE T+NT I  
Sbjct: 138 GFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITA 197

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
             S    E+A +   +M   +  PD VT N LL    + G   +A    +     G   +
Sbjct: 198 CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPN 257

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTYN L+S+  +      A  +   M  K + PD +TY ++ +A   +G++E+A     
Sbjct: 258 IVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAM---- 313

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                 +I +Q+   N +       P+S +++  I  H     + + + IFE+ +  G+ 
Sbjct: 314 ------EIYNQMRTSNCT-------PNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVE 360

Query: 515 INKSTYMNLMNGLIK 529
            +  T+ +L+    K
Sbjct: 361 PDIVTWNSLLGAFGK 375



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 20/218 (9%)

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEK-SFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           +I+ G   EGQ  KAL+  N M +  +F+PD VT  ++L  L RE  L    + F+S   
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR--- 445
           +G  +D   Y +LIS+L + R+ ++A G   +M+E    P   TY  I     + GR   
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170

Query: 446 ----LEEAQKFTSIMVE------------TGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
               L E  K   I  +            +G +  +  +  T        P  ++Y+  +
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           + +   G Y +A  + +E    G   N  TY  L++  
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAF 268



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 19/275 (6%)

Query: 260 TLITGYFRDEKANRALKLWDEMKER-QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
           +++ G  R+ + N+AL++++ M++     P   T   M+  L +  +      +   L +
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG-ILE 377
            G   D   + ++I       + ++AL F  +M E   +P +VT N+++    ++G   E
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
             L+ F     +G   D  TYNT I++       E+A  L ++M+     PDR TY A+ 
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
               ++G   EA      M   G +                 P+ ++Y+E ++     G 
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCL-----------------PNIVTYNELLSAFGRAGL 273

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              A ++ +    KGI  +  TY +L++   +  K
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGK 308


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 257/530 (48%), Gaps = 17/530 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTY++++ AL K   +++    L  M  +G++PN  TYN L+ GY   G  KEA
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +RV   M ++  LPDV T +ML+   C  G ++EA  +   M      P+V +Y  ++N 
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G  ++   L D +   GI P+  T N++IK Y   G +DKA  I   M ++G  PD
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY T+I A C+ G M++A    + M  +G+  +    + ++   C    L +A  L++
Sbjct: 429 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIS 488

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G +LD V + ++I    +  +   A  ++D      + P+   Y+ ++ G    G
Sbjct: 489 EIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVG 548

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+A+ + + ++ +G+ P++  + T+++G+C  G++++ L    +M++K  KP  +  N
Sbjct: 549 KMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 608

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I++ GL   G    A   F      G A++  TYN ++  L K R  ++A  L  E+   
Sbjct: 609 IIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAM 668

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            +  +  T   +   + ++ R+EEA+   + +  +G +                 P  ++
Sbjct: 669 NVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV-----------------PCVVT 711

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           YS  I     +G  ++A  +F   +  G   +     +++  L+K+ + +
Sbjct: 712 YSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 255/534 (47%), Gaps = 20/534 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  N    N L+ G+C+     EA+ +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++Y++L+   C+ G   +A  L + M     +  PDVV Y+T+I+ 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT++ ++   CK   +DKA   +R M   G  P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R  +  + +TL+ ++ +LC   K+ EA  + +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   +  SY  ++ GY           L+D M    I P  +T+N +I   +  G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ PD  T+ T+I   C  G+++ A++  N+M+++   PD    +
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V ++++I++LCK  R+ DA  +       
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P    Y+ +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNDVV 571

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Y   +N +C  GR  + L +F E  QKGI  +   Y  +++GL +  +++   V
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 258/531 (48%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +Y+ +L +L  +GK  +  DLL  M + G V  P+   Y+ ++ G+ K G +
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDV 235

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD  TY+ +++  C A  +++A    ++M +  +LP+  TYN L
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+  H I P+ VT ++++   CK GKI +A  +   M   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P+  +Y  +++     G + +   + D+M   G+  +  T N ++        LD+A +
Sbjct: 356 NPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 415

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G   D V+Y T+I    R  K + A++ +++M ++ + P  + Y+ +I G  
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A ++++E++ +GM  D   F++II+  C  G+V  A    +  V     P  V
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             ++L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +K + P    Y  I   L E+GR   A+     M E+G                 I  +
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG-----------------IAMN 638

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +Y+  +        + +A+ +F+E R   + IN  T   ++ G+ + R+
Sbjct: 639 KCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRR 689



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 215/475 (45%), Gaps = 56/475 (11%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P   TY  L++    + R   A     +L   G++ N +  N ++K +C+  + D+A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 171 KI------------------------------------VRNMEENGF--SPDCVTYNTLI 192
            I                                    +R M E G   SPD V Y+T+I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G++ +A  +   M ++G+  + +T ++++H LC  + +D+A   L     +G  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +  +Y  LI GY    +   A++++ EM+   I+P   T + ++  L + GK ++A D+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + +   G  P+  ++  +++G+ ++G +       + M+     PDI T N+L+     
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L+KA+  F      G   D VTY T+I++LC+  +++DA    ++M ++ + PD+Y 
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQVVQPNTSKTPEEID--------- 479
           Y  +       G L +A++  S ++  G     +    +  N  K    +D         
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 480 -----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P+++ YS  ++ +C  G+ + AL++F+     GI  N   Y  L+NG  K
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 143/305 (46%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V +++I++ L K G++ + +++       GL P    Y++L+ GYC +G +++A+RV 
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      P+   Y  L+NG+C  G ++E   L +EM    + P  + YN +I+  FE+
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR++ A     E+ E GI  N  T+NI+++   K    D+A  + + +       + +T 
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NT+I    +   +EEA  +   + R GL    +T + ++  L  E  ++EA  + +S   
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D      ++    +  +  RA     ++ ER       T   ++   S  G   +
Sbjct: 738 AGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797

Query: 309 AIDML 313
            I  L
Sbjct: 798 HIRFL 802


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 222/423 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  +L  + K  + + V  L   M+  G+ P   T NI+++  C+      A  
Sbjct: 79  LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASC 138

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M +    PD+ T+  L++G+C+   +E+A  L  ++  +   P+VVTY TLI+   
Sbjct: 139 FLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC 198

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++     A ++ +++ ++GI+PN VT+N ++   C+ G+   A  ++R+M + G  P+ +
Sbjct: 199 KNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI 258

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+  LIDA  K G + EA  +  VM +  +  +  T   +++ LC   +LDEA  +    
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              GYY +EV+Y TLI G+ + ++     K++ EM ++ ++ +T TY  +I G    G+ 
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A ++ N++      PD  T+N ++ G C  G VEKAL     M ++    +IVT  I+
Sbjct: 379 DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E A   F S   KG   + +TY T+IS  C+   + +A  L  +M+E   
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGF 498

Query: 427 GPD 429
            P+
Sbjct: 499 LPN 501



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 219/458 (47%), Gaps = 6/458 (1%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  IL       + NE  DL + M     +P+   +  L+S   K+   K    V+ L  
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKM---KRFDVVISLFE 106

Query: 73  QNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           Q + L   P ++T N+++N  C +     A     +M  L   PD+VT+ +L++ F    
Sbjct: 107 QMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWN 166

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R  +A  L D++   G +PN VT+  +I   CK   ++ A +I   M +NG  P+ VTYN
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYN 226

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +L+   C+ G   +A  ++  M ++G++ N IT   ++       K+ EA  L     + 
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
             Y D  +Y  LI G     + + A +++  M+     P+  TY  +I G  +S + E  
Sbjct: 287 SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +  E+ Q G++ +  T+  +I G+C  G+ + A +  N+M  +   PDI T N+LL G
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDG 406

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC  G +EKAL  F+    +   ++ VTY  +I  +CK  ++EDAF L   +  K + P+
Sbjct: 407 LCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPN 466

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
             TY  + +     G + EA      M E G + ++ V
Sbjct: 467 VITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 195/384 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   T N +++ + +  +       L  M K G  P+  T+  L+ G+C    
Sbjct: 108 MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+ + D +      P+V TY  LI+  C    L  A  +  +M    + P+VVTYN+
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   E GR  +A  L+ ++ + GI+PN +T   +I  + K GKI +A ++ + M +  
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  LI+  C  G ++EA +M  +M   G   N +T  T++H  C  K++++  
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +    S++G   + ++Y  LI GY    + + A +++++M  R+  P   TYN ++ GL
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G  E+A+ +   + +  M  +  T+  II G C  G+VE A      +  K  KP++
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           +T   ++SG CR G + +A   F+
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFK 491



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 180/359 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT+ ++L       ++ +   L   +   G  PN  TY  L+   CK   
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRH 202

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ + + M  N   P+V TYN L++G C  G   +A  L ++M    + P+V+T+  
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ MEA +L   + +  + P+  T+  +I   C  G++D+A ++   ME NG
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNG 322

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+ VTY TLI   CK+  +E+  ++   M +KGL  NTIT   ++   C   + D A 
Sbjct: 323 YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQ 382

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N    R    D  +Y  L+ G   +    +AL ++  M++R++  +  TY  +I G+
Sbjct: 383 EVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGM 442

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + GK E A D+   L   GM P+  T+ T+I GFC  G + +A     KM E  F P+
Sbjct: 443 CKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 214/459 (46%), Gaps = 17/459 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +   M  ++ LP +  +  L++        +    L ++M+ L + P + T N 
Sbjct: 63  FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N    S +   A   + ++ + G +P+ VT   ++  +C   +I+ A  +   +   G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+ VTY TLI   CK  ++  A  + + MG  G++ N +T N+++  LC   +  +A 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    KRG   + +++  LI  + +  K   A +L+  M +  + P  FTY A+I GL
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ ++A  M   +  +G  P+E T+ T+IHGFC   +VE   +   +M +K    + 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T  +L+ G C  G  + A + F     +    D  TYN L+  LC    +E A  +   
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++++  +  TY  I   + + G++E+A      +   G                 + P
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKG-----------------MKP 465

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           + I+Y+  I+  C +G   +A  +F++ ++ G   N+S 
Sbjct: 466 NVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 206/446 (46%), Gaps = 18/446 (4%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           +L NG  N     EA  L   M   + LP +V +  L++   +  R      L +++   
Sbjct: 53  ILRNGLHNL-QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL 111

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           GI P   T NI++   C+  +  +A   +  M + GF PD VT+ +L+   C    +E+A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             + D +   G + N +T  T++H LC  + L+ A  + N     G   + V+Y +L++G
Sbjct: 172 LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                + + A  L  +M +R I P+  T+ A+I    + GK  +A ++   ++Q  + PD
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPD 291

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+  +I+G C+ G++++A Q    M    + P+ VT   L+ G C+   +E   K F 
Sbjct: 292 VFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY 351

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               KG   +++TY  LI   C   R + A  + ++M  ++  PD  TY  +   L  +G
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNG 411

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
            +E+A      M +                  E+D + ++Y+  I   C  G+ +DA  +
Sbjct: 412 YVEKALMIFKYMRK-----------------REMDINIVTYTIIIQGMCKVGKVEDAFDL 454

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKR 530
           F     KG+  N  TY  +++G  +R
Sbjct: 455 FCSLFSKGMKPNVITYTTMISGFCRR 480



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 2/326 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG-WL 61
           G G  P+ VTY T++  L K   LN   ++ + M   G+ PN  TYN LVSG C++G W 
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A  + D+M +    P+V T+  LI+ +   G + EA  L K M  + + PDV TY  L
Sbjct: 240 DAAWLLRDMMKRGIQ-PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN     GR  EA ++   ++ +G  PN VT+  +I  +CK  +++   KI   M + G 
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             + +TY  LI   C  G  + A  + + MG +    +  T N +L  LC    +++A M
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +     KR   ++ V+Y  +I G  +  K   A  L+  +  + + P+  TY  MI G  
Sbjct: 419 IFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 478

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETT 327
           + G   +A  +  ++ + G +P+E+ 
Sbjct: 479 RRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 30/285 (10%)

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           N AL L+  M   + +PS   +  ++  +++  + +  I +  ++   G+ P   T N +
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           ++  C   Q  +A  F  KM++  F+PD+VT   LL G C    +E AL  F   +  G 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             + VTY TLI  LCK R L  A  + ++M +  + P+  TY ++ + L E GR  +A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEID------------------------PSSISYSE 487
               M++ G      +QPN       ID                        P   +Y+ 
Sbjct: 244 LLRDMMKRG------IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTA 297

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            IN  C+ GR  +A Q+F      G   N+ TY  L++G  K ++
Sbjct: 298 LINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKR 342


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 234/438 (53%), Gaps = 9/438 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   G  P  VTYNT+LD+  K+G+ +++  LL +M+ +G   +PN  TYN++++G  + 
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARK 281

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G+L+EA  +V+ M  +K     +TYN LI G    G +++   L+ EME+  ++P VVTY
Sbjct: 282 GYLEEAAELVEEMRLSKKA-SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTY 340

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N +I+   +SG+   A     E+   G+ P+ +T+N ++  YCK G   +A  +  ++  
Sbjct: 341 NAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRR 400

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL---HTLCCEKK 235
            G +P  +TYN LID  C+ G++EEA R+ + M  +G   +  T   ++   H +C    
Sbjct: 401 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAM 460

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
             E     +    +G   D  +Y T I         +++ +L + +    I   T TYN 
Sbjct: 461 TRE---FFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNI 517

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I GL ++G  + A +++ +++ +G+ PD  T+  +IH  C  G + +A +F N M+   
Sbjct: 518 LIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDG 577

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P  VT  +++   CR G L  A  +FR  + +G   + +TYN LI +LC+  R + A+
Sbjct: 578 LPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAY 637

Query: 416 GLLSEMEEKKLGPDRYTY 433
               EM E+ L P++YTY
Sbjct: 638 RHFYEMLERGLVPNKYTY 655



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 213/473 (45%), Gaps = 15/473 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD    N +L  L    + +++  + ++M + G+ P+  TYN L+  + K G 
Sbjct: 187 MASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGR 246

Query: 61  LKEAMRVVDLMTQNKS--LPDVWTYNMLINGWCNAG------MLEEAFRLRKEMESLKLL 112
             +   ++  M    S  LP+  TYN++I G    G       L E  RL K+  S    
Sbjct: 247 KDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSF--- 303

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
               TYN LI      G   +   L  E++  GI P  VT+N MI    + G+I+ A   
Sbjct: 304 ----TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              M   G  PD +TYN+L++  CKAGN +EA  +   + R GL    +T N ++   C 
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
              L+EA  L     ++G   D  +Y  L+ G           + +DEM  + + P  F 
Sbjct: 420 LGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFA 479

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN  I      G   ++  +   ++  G+  D  T+N +I G C  G ++ A +   +M+
Sbjct: 480 YNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMI 539

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
               +PD +T   L+   C  G L +A KFF   I  G    +VTY  +I + C+   L 
Sbjct: 540 SNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLY 599

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
            A+G   +M E+ + P+  TY  +  AL   GR + A +    M+E G + ++
Sbjct: 600 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNK 652



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 171/334 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VTYN ++  L + G++   +    +M+  GL+P+  TYN L++GYCK G 
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGN 387

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA+ +   + +    P V TYN+LI+G+C  G LEEA RL++EM     LPDV TY  
Sbjct: 388 QKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTI 447

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+             +  DE+   G++P+   +N  I      G I K+ ++   +   G
Sbjct: 448 LMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEG 507

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D VTYN LID  CK GN+++A  +M  M   GL+ + IT   ++H  C    L EA 
Sbjct: 508 ISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREAR 567

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              N     G     V+Y  +I  Y R      A   + +M E  + P+  TYN +I  L
Sbjct: 568 KFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 627

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
            + G+T+ A     E+L+ G++P++ T+  +I G
Sbjct: 628 CRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 229/476 (48%), Gaps = 21/476 (4%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M  +   PDV   N ++    +A   ++   +  EM  L + P +VTYNTL++ F + GR
Sbjct: 187 MASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGR 246

Query: 131 SMEAFKLIDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
             +   L+ E++  G    PN VT+N++I    ++G +++A ++V  M  +  +    TY
Sbjct: 247 KDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKA-SSFTY 305

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI      G +++   +   M  +G+    +T N ++H L    +++ A         
Sbjct: 306 NPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRA 365

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D ++Y +L+ GY +      AL L+ +++   + P+  TYN +I G  + G  E+
Sbjct: 366 MGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 425

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +  E+++ G +PD  T+  ++ G  +   +    +F ++M+ K  +PD    N  + 
Sbjct: 426 ARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRIC 485

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
                G + K+ +     +L+G + D+VTYN LI  LCK   L+DA  L+ +M    L P
Sbjct: 486 AEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQP 545

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSK----------- 473
           D  TY  +  A  E G L EA+KF + M+  G     + + V+     +           
Sbjct: 546 DCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605

Query: 474 ---TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                E ++P+ I+Y+  I+  C  GR + A + F E  ++G+  NK TY  L++G
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 20/264 (7%)

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           D  +   L  + EM    + P     N ++  L  + + +    +  E+LQ G+ P   T
Sbjct: 174 DTCSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVT 233

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEK--SFKPDIVTCNILLSGLCREGILEKALKFFRS 385
           +NT++  F  EG+ +K      +M  +  S  P+ VT N++++GL R+G LE+A +    
Sbjct: 234 YNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEE 293

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
             L  KA  S TYN LI+ L     ++    L  EME + + P   TY A+   L++SG+
Sbjct: 294 MRLSKKA-SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQ 352

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +E AQ     M   G +                 P  I+Y+  +N +C  G  K+AL +F
Sbjct: 353 IEAAQAKFVEMRAMGLL-----------------PDVITYNSLLNGYCKAGNQKEALLLF 395

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
            + R+ G+A    TY  L++G  +
Sbjct: 396 GDLRRAGLAPTVLTYNILIDGYCR 419


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 259/534 (48%), Gaps = 17/534 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+N+++    +  +L    DL   M  +G   +  +Y  L+ G+C+ G + EA
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEA 218

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   MTQ    PD++T+  L+ G C+AG  EE   + ++M+ L   P    Y  L++ 
Sbjct: 219 LELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +    ++ EA K+++E+ + G+ P  VT  I++  YC+EG++  A ++  +M   G  P+
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPN 334

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN ++   C AG + +A  ++D M   G++ + +T N ++   C +  +  A+ LL 
Sbjct: 335 VWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR 394

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y  LI    +  K + A  L+D ++ R I P++ T+N +I GL ++G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A   L  ++ +G  PD  T++  I   C     ++ L F ++M++K  KP  V   
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYT 514

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+++ L  E     A + +   + +G + D VTY T + + C E RL++A  +++EM++ 
Sbjct: 515 IVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKC 574

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI-NH-----QVVQPNTSKTPEEI 478
           +   D   Y  +       G+ + A      M     + NH      +      +  E +
Sbjct: 575 RTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHV 634

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              + S  + I          D  ++FE  ++  +  +  TY++++ G  + R+
Sbjct: 635 PLKATSVWKTIE-------LADVFELFELMKKNSVPSSARTYLSILEGFSEERR 681



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 239/514 (46%), Gaps = 21/514 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TYN ++ AL ++  L   +  LS M + G  P+  T+N L+ GYC+   L+ A  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M       D  +Y  LI G+C AG ++EA  L +EM      PD+ T+  L+    +
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +GR  E   ++ ++ E G +P    +  ++  +C+E K ++A KI+  M ++G  P  VT
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
              +++A C+ G M  A R+ + M  KG + N  T N I+   C   K+ +A  LL+   
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D V+Y  LI G   D     A +L   M+   +    +TYN +I  L ++GK +
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  + + L   G+ P+  TFNT+I+G C  G+ + A  F   M+   + PD  T +  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+    ++ L F    + K     +V Y  +I+ L  ER    A  +  +M  +   
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCS 542

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY     A    GRL+EA+   + M +   I               +D  +++Y+ 
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTI---------------VD--AMAYNT 585

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
            I+ H S G+   A+ I +         N  T+ 
Sbjct: 586 LIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFF 619



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 227/485 (46%), Gaps = 21/485 (4%)

Query: 42  VPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
            P   TYN L+   C+   L+ A R + LM ++   PD +T+N LI G+C    LE A  
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           L  +M       D V+Y  LI  F E+GR  EA +L  E+ +    P+  TH  ++K  C
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLC 241

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
             G+ ++   +++ M+E G+ P    Y  L+D  C+    EEA ++++ M   GL    +
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T   +++  C E ++  A  +  S   +G   +  +Y  ++ G+    K  +A+ L D+M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           +E  + P   TYN +I G    G    A  +L  +  +G+  D+ T+N +I   C  G+V
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           ++A    + +  +  +P+ VT N +++GLC+ G  + A  F  + I  G A D+ TY+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           I +LCK +  ++    + EM +K + P    Y  +   L        A +    MV  G 
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG- 540

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                             P  ++Y+  +  +C++GR  +A  +  E ++    ++   Y 
Sbjct: 541 ----------------CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYN 584

Query: 522 NLMNG 526
            L++G
Sbjct: 585 TLIDG 589



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 255/546 (46%), Gaps = 33/546 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P    Y  ++D   ++ K  E   +L++M   GL+P   T  I+V+ YC+ G 
Sbjct: 256 MKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGR 315

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+RV + M      P+VWTYN ++ G+CNAG + +A  L  +M    + PDVVTYN 
Sbjct: 316 MSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNL 375

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G    AF+L+  ++ +G+  +  T+N++I   CK GK+D+AC +   +E  G
Sbjct: 376 LIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT+I+  CKAG  + A   ++ M   G   +T T +  +  LC  K   E  
Sbjct: 436 IRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGL 495

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             ++   ++      V+Y  +I   F +     A ++W +M  +   P   TY   +   
Sbjct: 496 FFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAY 555

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ ++A +++ E+ +   I D   +NT+I G  S GQ ++A+     M   +  P+ 
Sbjct: 556 CNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNH 615

Query: 361 VTCNILLSGLCREGILEKA-LKFFRSW-------------ILKGKAVDSV--TYNTLISS 404
            T  ILL  L +  + E   LK    W             ++K  +V S   TY +++  
Sbjct: 616 FTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEG 675

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
             +ERRL++   L+S M+E+ L  +   Y A+     +     +A      M+  G +  
Sbjct: 676 FSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFL-- 733

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                          P+ I Y   ++   ++G+   A +IF  +R K    ++  +  ++
Sbjct: 734 ---------------PNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVII 778

Query: 525 NGLIKR 530
           +G I++
Sbjct: 779 DGFIRK 784



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 243/536 (45%), Gaps = 33/536 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+  ++  L   G+  E   +L  MK+ G  P    Y  LV  +C+    +EA ++
Sbjct: 228 PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKI 287

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M  +  +P V T  +++N +C  G +  A R+ + M      P+V TYN ++  F  
Sbjct: 288 LNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCN 347

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  +A  L+D++ E G++P+ VT+N++I+  C +G I  A +++R ME NG + D  T
Sbjct: 348 AGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYT 407

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LIDA CK G ++EA  + D +  +G++ N++T NT+++ LC   K D A   L +  
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMI 467

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             GY  D  +Y   I    + + +   L   DEM ++ + PST  Y  +I  L       
Sbjct: 468 SAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYG 527

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +  +++  G  PD  T+ T +  +C+EG++++A     +M +     D +  N L+
Sbjct: 528 LATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLI 587

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTL----------------ISSLCKERRL 411
            G    G  ++A+   +         +  T+  L                 +S+ K   L
Sbjct: 588 DGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIEL 647

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
            D F L   M++  +     TY +I     E  RL+E     S+M E             
Sbjct: 648 ADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKE------------- 694

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
               E +  +   Y+  +N  C    Y DA  +       G   N   Y  L++GL
Sbjct: 695 ----ENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGL 746



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 226/518 (43%), Gaps = 86/518 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  VT   +++A  ++G+++    +   M+ +G  PN  TYN +V G+C  G + +A
Sbjct: 295 GLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKA 354

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++D M +    PDV TYN+LI G C  G +  AFRL + ME   L  D  TYN LI+ 
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G+  EA  L D L+  GI+PN+VT N +I   CK GK D AC  + NM   G++PD
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI----------------------- 221
             TY+  I+  CK    +E    +D M +K +K +T+                       
Sbjct: 475 TYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWG 534

Query: 222 ------------TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                       T  T +   C E +LDEA  ++    K    +D ++Y TLI G+    
Sbjct: 535 QMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIG 594

Query: 270 KANRALKLWDEMKERQIMPSTFT------------------------------------- 292
           + +RA+ +   M     MP+ FT                                     
Sbjct: 595 QTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELF 654

Query: 293 --------------YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
                         Y +++ G S+  + ++   +++ + +  +  +E  +N +++ FC  
Sbjct: 655 ELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKL 714

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
                A      M+   F P+++    LLSGL  EG  ++A + FRS   K    D + +
Sbjct: 715 RMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVW 774

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             +I    ++   +    ++S +E+ K  P   TYA +
Sbjct: 775 KVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAML 812



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 168/351 (47%), Gaps = 21/351 (5%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P   TYN LI A C+  ++  A R + +M R G + +  T N+++   C  ++L+ A+ 
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L      RG+  D VSY  LI G+    + + AL+L+ EM +    P  +T+ A++ GL 
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLC 241

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            +G+ E+ + ML ++ + G  P    +  ++  +C E + E+A +  N+M +    P +V
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           TC I+++  CREG +  A++ F S   KG   +  TYN ++   C   ++  A  LL +M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E  + PD  TY  +       G +  A +   +M   G    Q                
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQY--------------- 406

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +Y+  I+  C  G+  +A  +F+    +GI  N  T+  ++NGL K  K
Sbjct: 407 --TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGK 455



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 22/417 (5%)

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIK-PNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           + +L+  F     +    +L   +  H    P   T+N +I+  C+   +  A + +  M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             +G+ PD  T+N+LI   C+   +E A  +   M  +G   + ++   ++   C   ++
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           DEA  L    ++   Y    ++  L+ G     +    L +  +MKE    P+T  Y A+
Sbjct: 216 DEALELFREMTQPDMY----THAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +    +  K E+A  +LNE+  SG++P   T   +++ +C EG++  A++    M  K  
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +P++ T N ++ G C  G + KA+         G   D VTYN LI   C +  +  AF 
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL  ME   L  D+YTY  +  AL ++G+++EA      +   G                
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG---------------- 435

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            I P+S++++  IN  C  G++  A    E     G A +  TY   +  L K + S
Sbjct: 436 -IRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGS 491



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 166/409 (40%), Gaps = 51/409 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G   D  TYN ++DAL K GK++E   L   ++ +G+ PN  T+N +++G CK G 
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGK 455

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A   ++ M      PD +TY+  I   C     +E      EM    + P  V Y  
Sbjct: 456 FDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTI 515

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +INR F       A ++  ++   G  P+ VT+   ++ YC EG++D+A  +V  M++  
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 181 FSPDCVTYNTLIDANCKAGNMEEA------------------------------------ 204
              D + YNTLID +   G  + A                                    
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVP 635

Query: 205 ---------------FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
                          F + ++M +  +  +  T  +IL     E++LDE   L++   + 
Sbjct: 636 LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEE 695

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
              L+E  Y  L+  + +    + A  L   M     +P+   Y  ++ GL+  G+ ++A
Sbjct: 696 NLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRA 755

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            ++           DE  +  II GF  +G  +      + + +   KP
Sbjct: 756 KEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKP 804



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 78/175 (44%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP 78
           +++K  +L +V +L   MKK  +  +  TY  ++ G+ +   L E   +V LM +     
Sbjct: 640 SVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPL 699

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           +   YN L+N +C   M  +A+ L   M     LP+++ Y  L++     G++  A ++ 
Sbjct: 700 NEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIF 759

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
                     + +   ++I  + ++G  D    ++  +E+    P   TY  L +
Sbjct: 760 RSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 218/423 (51%), Gaps = 3/423 (0%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N++L AL +  +LN   D L +MK QGL  N +  ++ +SGYC  G +    +++  M  
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKY 249

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               PDV  Y ++I+  C   +L+EA  +  +M  + +  D V+ +++++ + + G+S E
Sbjct: 250 LGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEE 309

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A   +D L+   + PN    N  I   C +G + KA K+ ++M E G  PDC +Y T++ 
Sbjct: 310 A---MDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMA 366

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK  ++  A + +  M ++G++ +  T   ++ + C    ++ A  L       G   
Sbjct: 367 GYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVP 426

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D VSY TL+ GY +     +A +L   M+   + P   TYN +I GL + G   +A D+L
Sbjct: 427 DVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDIL 486

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           +EL + G  PD  TF  II GF ++G  E+A      M E   +PD+VTC+ LL+G CR 
Sbjct: 487 DELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRT 546

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             + +A   F   +  G   D + YN+LI   C    ++DA  L+S M E  + P+  T+
Sbjct: 547 RCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITH 606

Query: 434 AAI 436
            A+
Sbjct: 607 HAL 609



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 211/392 (53%), Gaps = 6/392 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD V Y  ++D+L K   L E   +L  M + G+  +  + + +V GYCK+G 
Sbjct: 247 MKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGK 306

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EAM V+++   +   P+++ +N  I+  C  G + +A ++ ++M  + L+PD  +Y T
Sbjct: 307 SEEAMDVLEVFNLS---PNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTT 363

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  + +      A K + ++ + GI+P+  T+ ++I   CK G ++ A  + + M   G
Sbjct: 364 MMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEG 423

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V+YNTL++   K G++++AF ++ +M   G+  + +T N ++H L     ++EA 
Sbjct: 424 LVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAK 483

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L+  ++RG+  D V++  +I G+        A  L+  M E  + P   T +A++ G 
Sbjct: 484 DILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGY 543

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++    +A  + +++L +G+  D   +N++IHGFCS G ++ A    + M+E    P+ 
Sbjct: 544 CRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNN 603

Query: 361 VTCNILLSGL---CREGILEKALKFFRSWILK 389
           +T + L+ G    C E  +E+A    +  +LK
Sbjct: 604 ITHHALVLGYEKKCVENPVERAAFKLQQLLLK 635



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 221/504 (43%), Gaps = 51/504 (10%)

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           GW    +++ +  T+ + L  V  Y ML+N +    M + A +L  +M  L + P +   
Sbjct: 132 GWHNIFLKIHETHTKRRVLETV--YGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVC 189

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N+L+    ES +   A+  + E+   G+  NA   ++ I  YC +G ID   K++  M+ 
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKY 249

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEA----FRM--------------------------- 207
            G  PD V Y  +ID+ CK   ++EA    F+M                           
Sbjct: 250 LGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEE 309

Query: 208 -MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            MDV+    L  N    N+ +  LC +  + +A  +     + G   D  SY T++ GY 
Sbjct: 310 AMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYC 369

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           + +  + ALK   +M +R I PS  TY  +I    + G  E A  +   ++  G++PD  
Sbjct: 370 KVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVV 429

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           ++NT+++G+  +G ++KA +  + M      PD+VT NIL+ GL + G++ +A       
Sbjct: 430 SYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDEL 489

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             +G + D VT+  +I     +   E+AF L   M E  L PD  T +A+      +  +
Sbjct: 490 TRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCM 549

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
            EA      M++ G                 +    I Y+  I+  CS G   DA  +  
Sbjct: 550 AEANVLFHKMLDAG-----------------LKADVILYNSLIHGFCSLGNIDDACHLVS 592

Query: 507 ETRQKGIAINKSTYMNLMNGLIKR 530
              + GI  N  T+  L+ G  K+
Sbjct: 593 MMIEHGIMPNNITHHALVLGYEKK 616



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 194/395 (49%), Gaps = 6/395 (1%)

Query: 23  KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWT 82
           +G ++    LL +MK  G+ P+   Y I++   CK+  LKEA  ++  MTQ     D  +
Sbjct: 234 QGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVS 293

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
            + +++G+C  G  EEA  +   +E   L P++  +N+ I++    G  ++A K+  ++ 
Sbjct: 294 VSSVVDGYCKVGKSEEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMC 350

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           E G+ P+  ++  M+  YCK   I  A K +  M + G  P   TY  LID+ CK GNME
Sbjct: 351 EMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNME 410

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            A  +   M  +GL  + ++ NT+++    +  L +A+ LL+     G   D V+Y  LI
Sbjct: 411 MAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILI 470

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G  +    N A  + DE+  R   P   T+  +I G S  G  E+A  +   + +  + 
Sbjct: 471 HGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLE 530

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  T + +++G+C    + +A    +KM++   K D++  N L+ G C  G ++ A   
Sbjct: 531 PDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHL 590

Query: 383 FRSWILKGKAVDSVTYNTLISSL---CKERRLEDA 414
               I  G   +++T++ L+      C E  +E A
Sbjct: 591 VSMMIEHGIMPNNITHHALVLGYEKKCVENPVERA 625


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 241/478 (50%), Gaps = 33/478 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+ TY  I+    + G + E    + +M ++G V +  T  ++++ +C+   
Sbjct: 235 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 294

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+     +T+    P++  Y+ +I+G C  G +++AF L +EM      P+V T+ +
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354

Query: 121 LINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           LI+   + G +  AF+L  +L      KPN  T+  MI  YCKE K+ +A  +   M+E 
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P+  TY TLID +CKAGN  +A+ +M++M  +G   NT T N+I+  LC   + +EA
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 474

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + LLN+  +     D V+Y  LI+   +    N+AL   ++M +    P    Y  +I  
Sbjct: 475 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             +    + +  + +E+++ G+ P + T+ ++I G+C E +V  A++F  KM +    PD
Sbjct: 535 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 594

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT---------------------- 397
            ++   L+SGLC+E  L++A + + + I KG +   VT                      
Sbjct: 595 SISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE 654

Query: 398 ----------YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                      +TLI  LC E+++  A     ++ +K++  DR T AA +TA +ES +
Sbjct: 655 RLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNK 712



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 246/508 (48%), Gaps = 25/508 (4%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GKL E  D++ DM+ QGLV      N ++    ++  ++ A  V D M+     PD  TY
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
             +I G+C  G + EA R   EM     + D  T   +I  F E      A     ++ +
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ PN + ++ MI   CK G + +A +++  M +NG+ P+  T+ +LI   CK G  E 
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 367

Query: 204 AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+ + ++     K N  T   ++   C E+KL  A ML     ++G   +  +Y TLI
Sbjct: 368 AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 427

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +    ++A +L + M      P+T TYN+++ GL + G+ E+A  +LN   Q+ + 
Sbjct: 428 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D  T+  +I   C    + +AL F NKM +  F+PDI     L++  CR+ +++ + K 
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKL 547

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   I  G A    TY ++I   C+E+++  A     +M +    PD  +Y A+ + L +
Sbjct: 548 FDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCK 607

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             RL+EA++    M++ G             +P E+   +++Y     E+C    +  A+
Sbjct: 608 ESRLDEARQLYDTMIDKG------------LSPCEVTRVTLTY-----EYCKTEDFASAM 650

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I E        +NK  ++  ++ LI++
Sbjct: 651 VILER-------LNKKLWIRTVHTLIRK 671



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 198/419 (47%), Gaps = 19/419 (4%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  F E G+  EA  +I ++   G+       N +I    +   ++ A  +   M   G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  +I   C+ GN+ EA R +  M  +G  ++  TL  I+   C +  ++ A 
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              +  +K G   + ++Y ++I+G  +     +A +L +EM +    P+ +T+ ++I GL
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 301 SQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + G TE+A  +  +L++S    P+  T+  +I G+C E ++ +A     +M E+   P+
Sbjct: 360 CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 419

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T   L+ G C+ G   KA +       +G   ++ TYN+++  LCK  R E+AF LL+
Sbjct: 420 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 479

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
              + ++  D  TY  + +   +   + +A  F + M + G       QP+         
Sbjct: 480 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG------FQPDIHL------ 527

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
                Y+  I   C Q   KD+ ++F+E  + G+A  K TY +++ G   R K +S AV
Sbjct: 528 -----YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC-REKKVSLAV 580


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 229/462 (49%), Gaps = 18/462 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P  VT+  +++ L +  +  EV  +L +M++ G+ PN   YN L+  +C+ G 
Sbjct: 72  MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 131

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+R+ D M   K  P   TYN++    C  G +E A R+ ++M S+ +      +NT
Sbjct: 132 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 191

Query: 121 LINRFFESGRSMEAF-KLIDELDEHGIKPNAVTHNIMIKWYCKEGK-------------- 165
           ++    +  R +E+   + +E+   G++PN       ++  CK GK              
Sbjct: 192 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 251

Query: 166 ---IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
              + +A K+++ M   G   D +TYN +I   CK   MEEA ++   M R+G K +  T
Sbjct: 252 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 311

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            NT+LH  C   K++E + LL+     G   D VSYGT+I G+ + +   +A +   E+ 
Sbjct: 312 FNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 371

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           +R + P+ F YNA+I G  ++G    AID +  +  +G+ P   T+ ++++  C  G VE
Sbjct: 372 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 431

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +A    ++  E +    ++   I++ G C+ G + +A+ +F     +G + + +TY TL+
Sbjct: 432 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 491

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
            +  K    E+A  L  EM    + PD  TY  +     E G
Sbjct: 492 YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 252/531 (47%), Gaps = 35/531 (6%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +Y  ++ AL K GK++   ++L+++ + GL P   TYN+L+   CK G ++EA R+   M
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            Q    P V T+ +LING        E   + +EME L + P+ V YN LI      G  
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A +L DE+    +KP AVT+N++ K  CKEG++++A +I+ +M   G +  C  +NT+
Sbjct: 133 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 192

Query: 192 IDANC-KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA----------- 239
           +     +   +E    + + M  +G++ N   +   +  LC   K  EA           
Sbjct: 193 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 252

Query: 240 -YM-----LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            YM     ++ +   +G  LD ++Y  +I G  +D K   A+KL  +M  R   P  FT+
Sbjct: 253 KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTF 312

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N ++      GK E+   +L+++   G+ PD  ++ TII G C    + KA ++  ++++
Sbjct: 313 NTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMD 372

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +  KP++   N L+ G  R G +  A+    +    G    +VTY +L+  +C    +E+
Sbjct: 373 RGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEE 432

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  + S+  E  +      Y  +     + G++ EA  +   M   G             
Sbjct: 433 AKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRG------------- 479

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
               I P+ ++Y+  +  +   G  ++A ++F+E    G+  +  TY  L+
Sbjct: 480 ----ISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 233/499 (46%), Gaps = 35/499 (7%)

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
           N  +Y  ++   CK G +     ++  + +    P V TYN+L++  C +G +EEAFRL+
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
             ME   + P VVT+  LIN      R  E   ++ E+++ G+ PN V +N +I W+C++
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           G   +A ++   M      P  VTYN +  A CK G ME A R+++ M   G+ ++    
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189

Query: 224 NTILHTLCCE-KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW---- 278
           NT++  L    ++L+    + N    RG   ++      +    +  K   A+ +W    
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249

Query: 279 -------------DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                          M  + I   + TYN MI G  +  K E+AI +  ++ + G  PD 
Sbjct: 250 NKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            TFNT++H +C+ G++E+     ++M  +  +PDIV+   ++ G C+   + KA ++   
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + +G   +   YN LI    +   +  A   +  M+   + P   TY ++   +  +G 
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 429

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +EEA+   S          Q  + N       +D   I Y+  I  +C  G+  +A+  F
Sbjct: 430 VEEAKTIFS----------QARENN-------VDLGVIGYTIMIQGYCKLGKMVEAVAYF 472

Query: 506 EETRQKGIAINKSTYMNLM 524
           EE R +GI+ NK TY  LM
Sbjct: 473 EEMRSRGISPNKLTYTTLM 491



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 195/412 (47%), Gaps = 36/412 (8%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           +  N  ++  MIK  CK GK+D   +++  +   G  P  VTYN L+DA CK+G +EEAF
Sbjct: 7   VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R+   M + G+  + +T   +++ L   ++  E  ++L    + G   +EV Y  LI  +
Sbjct: 67  RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R    ++AL+L+DEM  +++ P+  TYN +   L + G+ E+A  +L ++L  GM    
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 326 TTFNTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG---------- 374
             FNT++        ++E  +   N+MV +  +P+       +  LC+ G          
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 375 -------ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
                   +++A K  ++ + KG  +DS+TYN +I   CK+ ++E+A  L  +M  +   
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD +T+  +  A    G++EE               H + Q  T    E + P  +SY  
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEET-------------FHLLDQMKT----EGLQPDIVSYGT 349

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            I+ HC     + A +   E   +G+  N   Y  L+ G   R   IS A+D
Sbjct: 350 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGY-GRNGDISGAID 400


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 247/527 (46%), Gaps = 18/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY  ++ AL K+G + +   L   M+ +G+      YN L++GYCK G 
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  ++  M +    P   +Y+ LI G C  G L  A  L +EM    +  +  T+  
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTA 483

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +  EA +L D++ +  + PN VT N+MI+ YC  G I KA ++   M E G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY +LI   C    + +A   +  +      +N  +L  +L+ L  E +  E Y
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETY 603

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + RG  LD VS+  ++    +     ++  L+ EMKE+ + P    Y  MI  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+     QA++  ++++  G  P+  T   +I+  C  G +  A     +M+  +  P+ 
Sbjct: 664 SKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N  L     EG +EKA K   S +L+G     V++N LI  LCK  ++++A  L+ +
Sbjct: 724 FTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRK 782

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           + E    PD  +Y+ I   L + G + +A +  + M+  G                 + P
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG-----------------LKP 825

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++Y+  I      G    AL I+    + G+  N  TY  L++G+
Sbjct: 826 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 251/530 (47%), Gaps = 18/530 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y   + A  +   L+  R L+  M+ +G+  +   YN+L+ G CK   ++EA+ V 
Sbjct: 197 DEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVK 256

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           ++M       D  TY  L+ G+C    LE A R+  +M  L  +P     + +I+   + 
Sbjct: 257 NVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK 316

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
               EAF L  +L + G+ PN   +N +I   CK  + D A ++ + M   G  P+ VTY
Sbjct: 317 ELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 376

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LI A CK G +E+A  + D M  KG+K+     N++++  C +  LD A  LL+   K
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G      SY  LI G  R+   + A++L  EM ER I  + +T+ A+I G  +  K ++
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  + ++++ S +IP+E TFN +I G+C  G + KA Q +++MVE   KPD  T   L+S
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC    + KA +F          +++ +   L+  L +E R  + + L  EM  + +  
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKL 616

Query: 429 DRYTYAAIHTALVESGRLEEA---------------QKFTSIMVETGKINHQVVQPNTSK 473
           D  ++  I  A ++    E++                 F + M++       ++Q     
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 474 TPEEID---PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
               ID   P++++++  IN  C  G    A  + +E     +  NK TY
Sbjct: 677 DQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTY 726



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 243/543 (44%), Gaps = 18/543 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   +  T + IL +L K  +    RDL   M + G+  +   Y   +  YC+   L  A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +V  M           YN+L+ G C    ++EA  ++  M ++ +  D VTY TL+  
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F        A ++  ++   G  P+    + MI    K+  +++A  +   + + G  P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN LID  CK    ++A R+   M  +GL+ N +T   ++H LC    +++A  L +
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G  +    Y +LI GY +    +RA  L   M +  + P+  +Y+ +I GL ++G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A+++  E+ + G+  +  TF  +I+GFC + ++++A +  +KM++ +  P+ VT N
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +++ G C  G + KA + +   +  G   D+ TY +LIS LC    +  A   ++++E  
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENS 577

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK----------INHQVVQPNTSKT 474
               + ++  A+   L   GR  E       M   G           +   + Q +  K+
Sbjct: 578 YAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 637

Query: 475 --------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                    + + P  I Y+  I+    +     AL  +++    G + N  T+  L+N 
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINN 697

Query: 527 LIK 529
           L K
Sbjct: 698 LCK 700



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 18/336 (5%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+ +N  T + IL +L   ++   A  L +   + G +LDE  Y   I  Y      + A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             L   M+   +  S   YN +++GL ++ + ++A+++ N ++  G+  DE T+ T+++G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC   ++E AL+  + M+   F P    C+ ++  L ++ ++E+A          G   +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
              YN LI  LCK  R +DA  L  EM  + L P+  TYA +  AL + G +E+A     
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 455 IMVETG----------KINHQVVQPNTSK--------TPEEIDPSSISYSEKINEHCSQG 496
            M + G           IN    Q +  +          E + P++ SYS  I   C  G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               A+++  E  ++GIA N  T+  L+NG  K +K
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKK 493



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 148/335 (44%), Gaps = 34/335 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PDN TY +++  L     +++  + ++D++    V N  +   L+ G  + G 
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGR 598

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E   + D M       D+ ++ +++         E++  L +EM+   + PD + Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA---CK--IVRN 175
           +I+   +    ++A    D++   G  PN VTH ++I   CK G +  A   CK  +  N
Sbjct: 659 MIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 176 MEENGFSPDC-----------------------------VTYNTLIDANCKAGNMEEAFR 206
           +  N F+ +C                             V++N LI   CKAG ++EA  
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAID 778

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +M  +   G   + I+ +TI+H LC    +++A+ L N    +G   D V+Y   I    
Sbjct: 779 LMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCN 838

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
              ++++AL ++  M    + P+  TY A++ G+S
Sbjct: 839 VHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 225/453 (49%), Gaps = 7/453 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    N ++  L ++G+ ++   ++        V     Y  L  GYC+ G L +A RV
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGACGPAATV---VAYGALTDGYCRAGRLGDARRV 157

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  M      P+ +TYN LI+  C  G + +A  +  +M      PDVVTYN L+    +
Sbjct: 158 VGGMPVQ---PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                +A +LID +   G  PN VT+N+++   C EG +D A +++RN+  +G  P  V 
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT++   C A    +A  ++  M R+    N  T N ++++LC +  L +A  LL   S
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + V+Y  +I G       + A+ L  +MK     P   TYN ++ GL  + +  
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++++ + Q+G +PD  TFNT+I   C +G +  A++   +M +K   P+ +T + ++
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SGL +   L++AL+ F     KG   D + Y  L   L  +  +E+A   + ++++  + 
Sbjct: 455 SGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGIS 513

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           P    Y AI   L  +G+ E A    + MV +G
Sbjct: 514 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG 546



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 219/442 (49%), Gaps = 4/442 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V Y  + D   + G+L + R ++  M  Q   PN  TYN L+   C+ G +++A+ V+D 
Sbjct: 136 VAYGALTDGYCRAGRLGDARRVVGGMPVQ---PNAYTYNPLIHTLCERGQVRDALSVLDD 192

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      PDV TYN+L+   C      +A  L   M +    P+ VTYN L++     G 
Sbjct: 193 MLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD 252

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A +L+  L  HG KP+ V +N ++K  C   +   A ++V  M      P+  T+N 
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +I + C+ G +++A ++++ M + G   N +T N I++ LC ++ +D A  LL+     G
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y TL+ G     +   A +L D M +   +P   T+N +I  L Q G    AI
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++  ++   G  P+  T++TII G     ++++AL+  N+M  K F PD +   +L   L
Sbjct: 433 EVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIY-QLLAECL 491

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
             +  +E+A++  R     G +  +V YN ++  LC+  + E A  +++ M      PD 
Sbjct: 492 NDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDD 551

Query: 431 YTYAAIHTALVESGRLEEAQKF 452
            TY  +   L   G L EA++ 
Sbjct: 552 LTYVILIEGLAYEGYLNEAREL 573



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 220/416 (52%), Gaps = 1/416 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G    P+  TYN ++  L ++G++ +   +L DM  +G  P+  TYNIL+   CK    +
Sbjct: 160 GMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYR 219

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +AM ++DLM      P+  TYN+L++G C  G +++A  L + + S    P  V YNT++
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 279

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                + R  +A +L+ E+      PN  T N++I   C++G + +A +++  M ++G +
Sbjct: 280 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            + VTYN +I+  C+  N++ A  ++  M   G K + +T NT+L  LC   +  +A  L
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEEL 399

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           +++ ++ G   D V++ TLI    +      A++++ +M ++   P++ TY+ +I GL++
Sbjct: 400 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 459

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           + K +QA+++ NE+   G  PD+  +  +      +  +E+A+Q   K+ +    P  V 
Sbjct: 460 ATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 518

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            N +L GLCR G  E A+      +  G   D +TY  LI  L  E  L +A  LL
Sbjct: 519 YNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 192/354 (54%), Gaps = 1/354 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+NVTYN ++D +  +G +++  +LL ++   G  P+   YN ++ G C    
Sbjct: 228 MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAER 287

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +V  M +    P+  T+N++I   C  G+L++A +L ++M       ++VTYN 
Sbjct: 288 WGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 347

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   E      A  L+ ++  +G KP+ VT+N ++K  C   +   A +++ NM +NG
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNG 407

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT+NTLI   C+ G M +A  +   M  KG   N+IT +TI+  L    KLD+A 
Sbjct: 408 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 467

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    +G+  D++ Y  L      D+    A++   ++++  I P T  YNA++ GL
Sbjct: 468 ELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 526

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++GKTE AID++  ++ SG +PD+ T+  +I G   EG + +A +   K+  +
Sbjct: 527 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 580



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTYN +L+A  K     +  +L+  M+ +G  PN  TYN+L+ G C  G + +A
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +  +   P    YN ++ G C+A    +A  L  EM      P+  T+N +I  
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   +A +L++++ +HG   N VT+N +I   C++  +D A  ++  M+  G  PD
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 376

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTL+   C A    +A  +MD M + G   + +T NT++  LC +  + +A  +  
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK 436

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   + ++Y T+I+G  +  K ++AL+L++EM  +   P    Y  +   L+   
Sbjct: 437 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDD 495

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+AI  + +L  SG+ P    +N I+ G C  G+ E A+     MV     PD +T  
Sbjct: 496 TIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYV 555

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           IL+ GL  EG L +A    R  ++K  + D V  N+LI S
Sbjct: 556 ILIEGLAYEGYLNEA----RELLIKLCSRD-VLVNSLIKS 590



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 200/416 (48%), Gaps = 30/416 (7%)

Query: 124 RFFESGRSMEAFKLIDELD-------EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           R   S R + A     +LD            P+A   N +++  C+ G+ D A ++V   
Sbjct: 70  RLLGSDRRLSALVHRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGAC 129

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G +   V Y  L D  C+AG + +A R   V+G   ++ N  T N ++HTLC   ++
Sbjct: 130 ---GPAATVVAYGALTDGYCRAGRLGDARR---VVGGMPVQPNAYTYNPLIHTLCERGQV 183

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
            +A  +L+    RG   D V+Y  L+    +     +A++L D M+     P+  TYN +
Sbjct: 184 RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL 243

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           + G+   G  + A+++L  L   G  P    +NT++ G CS  +   A +   +M+ ++ 
Sbjct: 244 MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 303

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P+  T N+++  LCR+G+L++A++        G   + VTYN +I+ LC++R ++ A G
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 363

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LLS+M+     PD  TY  +   L  + +  +A++    M + G +              
Sbjct: 364 LLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCL-------------- 409

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              P +++++  I   C +G   DA+++F++   KG   N  TY  +++GL K  K
Sbjct: 410 ---PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 222/423 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP    ++ +L A+ K  K + V  L   M+  G+  N  T NIL++ +C+   L  A+ 
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M +    P + T+  L+NG+C    + +A  +  +M  +   P+VV YNT+I+   
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +S +   A  L++ +++ GI P+ VT+N +I   C  G+   A ++V  M +    PD  
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+N LIDA  K G + EA    + M R+ L  + +T + +++ LC   +LDEA  +    
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + D V+Y  LI GY + +K    +KL+ EM +R ++ +T TY  +I G  ++GK 
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A ++   ++  G+ P+  T+N ++HG C  G++EKAL     M +     DIVT NI+
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +  A   + S   +G   D  TY T++  L K+    +A  L  +M+E  +
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497

Query: 427 GPD 429
            P+
Sbjct: 498 LPN 500



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 214/439 (48%), Gaps = 6/439 (1%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP---DVW 81
           KL++  DL   M +   +P+   ++ L+S   K+   K+   V+ L  Q + L    ++ 
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM---KKYDVVIYLWEQMQMLGIPHNLC 117

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T N+L+N +C    L  A     +M  L   P +VT+ +L+N F    R  +A  + D++
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
              G KPN V +N +I   CK  ++D A  ++  ME++G  PD VTYN+LI   C +G  
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
            +A RM+  M ++ +  +  T N ++     E ++ EA        +R    D V+Y  L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G     + + A +++  M  +   P   TY+ +I G  +S K E  + +  E+ Q G+
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           + +  T+  +I G+C  G++  A +   +MV     P+I+T N+LL GLC  G +EKAL 
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                   G   D VTYN +I  +CK   + DA+ +   +  + L PD +TY  +   L 
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477

Query: 442 ESGRLEEAQKFTSIMVETG 460
           + G   EA      M E G
Sbjct: 478 KKGLRREADALFRKMKEDG 496



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 175/328 (53%), Gaps = 6/328 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ V YNTI+D L K  +++   DLL+ M+K G+ P+  TYN L+SG C  G 
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A R+V  MT+ +  PDV+T+N LI+     G + EA    +EM    L PD+VTY+ 
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       R  EA ++   +   G  P+ VT++I+I  YCK  K++   K+   M + G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 181 FSPDCVTYNTLIDANCKAGNM---EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
              + VTY  LI   C+AG +   EE FR M      G+  N IT N +LH LC   K++
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC---GVHPNIITYNVLLHGLCDNGKIE 413

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A ++L    K G   D V+Y  +I G  +  +   A  ++  +  + +MP  +TY  M+
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            GL + G   +A  +  ++ + G++P+E
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPNE 501



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 210/435 (48%), Gaps = 17/435 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L+++  L   M   + LP +  ++ L++   +  +      L +++   GI  N  T NI
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++  +C+  ++  A   +  M + G  P  VT+ +L++  C+   + +A  M D M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            K N +  NTI+  LC  K++D A  LLN   K G   D V+Y +LI+G     + + A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           ++   M +R+I P  FT+NA+I    + G+  +A +   E+++  + PD  T++ +I+G 
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C   ++++A +    MV K   PD+VT +IL++G C+   +E  +K F     +G   ++
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTY  LI   C+  +L  A  +   M    + P+  TY  +   L ++G++E+A    + 
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M + G                 +D   ++Y+  I   C  G   DA  I+     +G+  
Sbjct: 422 MQKNG-----------------MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464

Query: 516 NKSTYMNLMNGLIKR 530
           +  TY  +M GL K+
Sbjct: 465 DIWTYTTMMLGLYKK 479



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 185/400 (46%), Gaps = 52/400 (13%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D +  +  +M +    P    ++ L+ A  K    +    + + M   G+  N  T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +L+  C   +L  A   L    K G+    V++G+L+ G+ R ++   AL ++D+M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS------- 337
              P+   YN +I GL +S + + A+D+LN + + G+ PD  T+N++I G CS       
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 338 ----------------------------EGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
                                       EG+V +A +F+ +M+ +S  PDIVT ++L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC    L++A + F   + KG   D VTY+ LI+  CK +++E    L  EM ++ +  +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY  +      +G+L  A++    MV  G                 + P+ I+Y+  +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCG-----------------VHPNIITYNVLL 403

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  C  G+ + AL I  + ++ G+  +  TY  ++ G+ K
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 18/293 (6%)

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  L++   + +K +  + LW++M+   I  +  T N ++    +  +   A+  L +++
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G  P   TF ++++GFC   +V  AL   ++MV   +KP++V  N ++ GLC+   ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            AL         G   D VTYN+LIS LC   R  DA  ++S M ++++ PD +T+ A+ 
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263

Query: 438 TALVESGRLEEAQKFTSIM---------VETGKINHQVVQPNTSKTPEEID--------- 479
            A V+ GR+ EA++F   M         V    + + +   +     EE+          
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           P  ++YS  IN +C   + +  +++F E  Q+G+  N  TY  L+ G  +  K
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 19/304 (6%)

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           S+R Y  +   Y  ++    R  K + +L L+  M + + +PS   ++ ++  +S+  K 
Sbjct: 39  SRRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           +  I +  ++   G+  +  T N +++ FC   Q+  AL F  KM++   +P IVT   L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L+G CR   +  AL  F   +  G   + V YNT+I  LCK +++++A  LL+ ME+  +
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVE----------TGKINHQVVQPNTSKTPE 476
           GPD  TY ++ + L  SGR  +A +  S M +             I+  V +   S+  E
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277

Query: 477 --------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    +DP  ++YS  I   C   R  +A ++F     KG   +  TY  L+NG  
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337

Query: 529 KRRK 532
           K +K
Sbjct: 338 KSKK 341


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 234/457 (51%), Gaps = 3/457 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +  +L+ + K  K + V +L   ++  G+  +  T N+L++ +C+      A  
Sbjct: 69  LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M +    PD+ T+  LING+C    +EEA  +  +M  + + PDVV Y T+I+   
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++G    A  L D+++ +GI+P+ V +  ++   C  G+   A  ++R M +    PD +
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+N LIDA  K G   +A  + + M R  +  N  T  ++++  C E  +DEA  +    
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + D V+Y +LI G+ + +K + A+K++ EM ++ +  +T TY  +I G  Q GK 
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK---SFKPDIVTC 363
             A ++ + ++  G+ P+  T+N ++H  C  G+V+KAL     M ++      P+I T 
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+LL GLC  G LEKAL  F     +   +  +TY  +I  +CK  ++++A  L   +  
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           K + P+  TY  + + L   G   EA      M E G
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 222/422 (52%), Gaps = 3/422 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D  T N +++   +  +       L  M K G  P+  T+  L++G+C    ++EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M +V+ M +    PDV  Y  +I+  C  G +  A  L  +ME+  + PDVV Y +L+N 
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              SGR  +A  L+  + +  IKP+ +T N +I  + KEGK   A ++   M     +P+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY +LI+  C  G ++EA +M  +M  KG   + +   ++++  C  KK+D+A  +  
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S++G   + ++Y TLI G+ +  K N A +++  M  R + P+  TYN ++  L  +G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401

Query: 305 KTEQAIDMLNELLQ---SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           K ++A+ +  ++ +    G+ P+  T+N ++HG C  G++EKAL     M ++     I+
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T  I++ G+C+ G ++ A+  F S   KG   + VTY T+IS L +E    +A  L  +M
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521

Query: 422 EE 423
           +E
Sbjct: 522 KE 523



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 227/472 (48%), Gaps = 20/472 (4%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +   M +++ LP +  +  L+N        +    L   ++ + +  D+ T N 
Sbjct: 53  FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N F +S +   A   + ++ + G +P+ VT   +I  +C   ++++A  +V  M E G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y T+ID+ CK G++  A  + D M   G++ + +   ++++ LC   +  +A 
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   +KR    D +++  LI  + ++ K   A +L++EM    I P+ FTY ++I G 
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  ++A  M   +   G  PD   + ++I+GFC   +V+ A++   +M +K    + 
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   L+ G  + G    A + F   + +G   +  TYN L+  LC   +++ A  +  +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412

Query: 421 MEEKKL---GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           M+++++    P+ +TY  +   L  +G+LE+A      M +                  E
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK-----------------RE 455

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +D   I+Y+  I   C  G+ K+A+ +F     KG+  N  TY  +++GL +
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 170/324 (52%), Gaps = 3/324 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +G  PD V Y ++++ L   G+  +   LL  M K+ + P+  T+N L+  + K G 
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  + + M +    P+++TY  LING+C  G ++EA ++   ME+    PDVV Y +
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +  +A K+  E+ + G+  N +T+  +I+ + + GK + A ++  +M   G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK---GLKMNTITLNTILHTLCCEKKLD 237
             P+  TYN L+   C  G +++A  + + M ++   G+  N  T N +LH LC   KL+
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A M+     KR   +  ++Y  +I G  +  K   A+ L+  +  + + P+  TY  MI
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502

Query: 298 WGLSQSGKTEQAIDMLNELLQSGM 321
            GL + G   +A  +  ++ + G+
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGV 526



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 3/181 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   + +TY T++    + GK N  +++ S M  +G+ PN  TYN+L+   C  G +K+A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406

Query: 65  MRVVDLMTQ---NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + + + M +   +   P++WTYN+L++G C  G LE+A  + ++M   ++   ++TY  +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I    ++G+   A  L   L   G+KPN VT+  MI    +EG   +A  + R M+E+G 
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526

Query: 182 S 182
           S
Sbjct: 527 S 527


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 163/592 (27%), Positives = 267/592 (45%), Gaps = 98/592 (16%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYN----ILVSGYCKLGWLKEAMRV 67
           TY TI  AL  KG +      L  M + G + N  +YN    +L+ G+C      EA++V
Sbjct: 168 TYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFC-----NEALKV 222

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M      P + TY+ L+      G   +   L +EM+S+ L P++ TY   I     
Sbjct: 223 YKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGR 282

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV-------------- 173
           + R  +A+ +  E+D+ G  P+ +T+ ++I   C  GK+DKA ++               
Sbjct: 283 ARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVT 342

Query: 174 ---------------------RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
                                  ME +G++PD VTY  LI+A CK+G+++ AF M+DVM 
Sbjct: 343 YITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMT 402

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            KG+  N  T NT++  L   ++LDEA  LL +    G      SY   I  Y +     
Sbjct: 403 TKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPA 462

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           +A+  ++ MK+R IMPS    NA ++ L+++G+  +A D+ N+L + G+ PD  T+N ++
Sbjct: 463 KAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLM 522

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPD--------------------------------- 359
             +   GQ++KA Q  ++M+ K  +PD                                 
Sbjct: 523 KCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLA 582

Query: 360 --IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
             +VT NILL+GL +EG + KAL+ F S    G   +++T+N+L+  L K   ++ A  +
Sbjct: 583 PTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKM 642

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
              M      PD  TY  I   L+  GR++ A  F           HQ+         + 
Sbjct: 643 FCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFF----------HQM--------KKF 684

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGLI 528
           + P  ++    I      GR +DA+++  E   Q  +  N   +  LM  ++
Sbjct: 685 LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECIL 736



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 259/555 (46%), Gaps = 35/555 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+  TY   + AL +  ++++   +  +M  +G  P+  TY +L+   C  G 
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK 320

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +   M  +   PD  TY  L++ +   G LE   R   EME     PDVVTY  
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +SG    AF ++D +   GI PN  T+N MI    K  ++D+A +++ NME  G
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   +Y   ID   K+G+  +A    + M ++G+  +    N  L+TL    ++ EA 
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAE 500

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N   K G   D V+Y  L+  Y +  + ++A +L  EM  +   P     N++I  L
Sbjct: 501 DIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTL 560

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ + A  M   L    + P   T+N ++ G   EG++ KAL+    M E    P+ 
Sbjct: 561 YKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNT 620

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N LL  L +   ++ ALK F    +     D +TYNT+I  L +E R++ AF    +
Sbjct: 621 ITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQ 680

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------- 473
           M +K L PD  T   +   +V  GR+E+A K     V      HQ      S+       
Sbjct: 681 M-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFV------HQACLQTNSQFWGELME 733

Query: 474 ---TPEEIDPSSISYSEKI-------NEH---------CSQGRYKDALQIFEE-TRQKGI 513
              T  EI+  +IS++E +       ++H         C + +  DA  +F++ T+  GI
Sbjct: 734 CILTEAEIE-EAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGI 792

Query: 514 AINKSTYMNLMNGLI 528
                +Y  LM+GL+
Sbjct: 793 HPTLESYNCLMDGLL 807



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 255/562 (45%), Gaps = 69/562 (12%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  VTYN +L  L K+GK+ +  +L   M + G  PN  T+N L+    K   +  A+++
Sbjct: 583  PTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKM 642

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
               MT     PDV TYN +I G    G ++ AF    +M+   L PD VT  TLI     
Sbjct: 643  FCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVR 701

Query: 128  SGRSMEAFKLIDEL-------------------------------------------DEH 144
             GR  +A K++ E                                            D+H
Sbjct: 702  HGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDH 761

Query: 145  GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEE 203
             + P       +IK  CK  K   A  +     +N G  P   +YN L+D    +   E+
Sbjct: 762  VMLP-------LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEK 814

Query: 204  AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
            A  + + M   G   N  T N +L      K++++ Y L +    RG   + +++  +I+
Sbjct: 815  ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874

Query: 264  GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
               +    N+AL L+ E+      P+  TY  +I GL ++G++EQA+ +  E+L  G  P
Sbjct: 875  ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP 934

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            +   +N +I+GF   G+++ A +   KMV++  +PD+ +  IL+  LC  G +++A+++F
Sbjct: 935  NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYF 994

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                L G   D+V+YN +I+ L K RRL++A  L SEM+ + + PD YTY A+   L  +
Sbjct: 995  EELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIA 1054

Query: 444  GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            G+++ A K    +   G                 ++PS  +Y+  I  H   G    A  
Sbjct: 1055 GKVDVAVKMYEELQLVG-----------------LEPSVFTYNALIRGHSLSGNKDQAFS 1097

Query: 504  IFEETRQKGIAINKSTYMNLMN 525
            +F++    G + N  T+  L N
Sbjct: 1098 VFKKMMVVGCSPNTETFAQLPN 1119



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 264/583 (45%), Gaps = 60/583 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY T++D   K G L  V+   ++M+  G  P+  TY IL+   CK G +  A  +
Sbjct: 338 PDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDM 397

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D+MT     P++ TYN +I G   A  L+EA  L + MESL + P   +Y   I+ + +
Sbjct: 398 LDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGK 457

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG   +A    + + + GI P+    N  +    + G+I +A  I  ++ + G SPD VT
Sbjct: 458 SGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVT 517

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN L+    KAG +++A +++  M  KG + + + +N++++TL    ++D A+ +     
Sbjct: 518 YNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                   V+Y  L+TG  ++ K  +AL+L+  M E    P+T T+N+++  LS++   +
Sbjct: 578 NLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVD 637

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ M   +      PD  T+NTII+G   EG+++ A  F ++M +K   PD VT   L+
Sbjct: 638 LALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLI 696

Query: 368 SGLCR------------------------------------EGILEKALKFFRSWILKGK 391
            G+ R                                    E  +E+A+ F    +    
Sbjct: 697 PGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSV 756

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG--PDRYTYAAIHTALVESGRLEEA 449
             D      LI  LCK ++  DA  +  +   K LG  P   +Y  +   L+ S   E+A
Sbjct: 757 CQDDHVMLPLIKVLCKRKKALDAQNVFDKFT-KNLGIHPTLESYNCLMDGLLGSNFTEKA 815

Query: 450 QKFTSIMVETG-------------------KINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            +    M   G                   +IN ++    +       +P++I+++  I+
Sbjct: 816 LELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN-KLYDLYSEMRSRGCEPNAITHNIIIS 874

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                     AL ++ E      +    TY  L++GL+K  +S
Sbjct: 875 ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 258/569 (45%), Gaps = 55/569 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G +P     N  L  L + G+++E  D+ +D+ K GL P+  TYN+L+  Y K G 
Sbjct: 471  MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A +++  M      PDV   N LIN    AG ++ A+++   +++LKL P VVTYN 
Sbjct: 531  IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L+    + G+ ++A +L   + E G  PN +T N ++    K   +D A K+   M    
Sbjct: 591  LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL------------- 227
             +PD +TYNT+I    + G ++ AF     M +K L  + +TL T++             
Sbjct: 651  CNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAI 709

Query: 228  -------HTLC----------------CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
                   H  C                 E +++EA              D+     LI  
Sbjct: 710  KVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKV 769

Query: 265  YFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              + +KA  A  ++D+  K   I P+  +YN ++ GL  S  TE+A+++  ++  +G  P
Sbjct: 770  LCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHP 829

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            +  T+N ++       ++ K    +++M  +  +P+ +T NI++S L +   L KAL  +
Sbjct: 830  NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               +    +    TY  LI  L K  R E A  +  EM +   GP+   Y  +     +S
Sbjct: 890  YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKS 949

Query: 444  GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            G ++ A +    MV+ G                 I P   SY+  +   C  GR  +A+Q
Sbjct: 950  GEIDFACELFKKMVKEG-----------------IRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 504  IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             FEE +  G+  +  +Y  ++NGL K R+
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRR 1021



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 180/342 (52%), Gaps = 6/342 (1%)

Query: 4    FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
             G  P   +YN ++D L       +  +L  DMK  G  PN  TYN+L+  +   G  K 
Sbjct: 790  LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH---GKSKR 846

Query: 64   AMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              ++ DL ++ +S    P+  T+N++I+    +  L +A  L  E+ S    P   TY  
Sbjct: 847  INKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGP 906

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI+   ++GRS +A K+ +E+ ++G  PN+V +NI+I  + K G+ID AC++ + M + G
Sbjct: 907  LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD  +Y  L++  C  G ++EA +  + +   GL  +T++ N I++ L   ++LDEA 
Sbjct: 967  IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEAL 1026

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L +    RG   D  +Y  LI       K + A+K+++E++   + PS FTYNA+I G 
Sbjct: 1027 SLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGH 1086

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            S SG  +QA  +  +++  G  P+  TF  + + +   G V 
Sbjct: 1087 SLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 183/367 (49%), Gaps = 1/367 (0%)

Query: 51   LVSGYCKLGWLKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
            L+   CK     +A  V D  T+N  + P + +YN L++G   +   E+A  L ++M+S 
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 110  KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
               P+  TYN L++   +S R  + + L  E+   G +PNA+THNI+I    K   ++KA
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 170  CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
              +   +    FSP   TY  LID   KAG  E+A ++ + M   G   N++  N +++ 
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 230  LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
                 ++D A  L     K G   D  SY  L+       + + A++ ++E+K   + P 
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 290  TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
            T +YN +I GL +S + ++A+ + +E+   G+ PD  T+N +I      G+V+ A++ + 
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065

Query: 350  KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            ++     +P + T N L+ G    G  ++A   F+  ++ G + ++ T+  L +   +  
Sbjct: 1066 ELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125

Query: 410  RLEDAFG 416
             + + FG
Sbjct: 1126 LVHNPFG 1132



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 178/373 (47%), Gaps = 2/373 (0%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEA 64
            C  D+V    ++  L K+ K  + +++     K  G+ P   +YN L+ G     + ++A
Sbjct: 757  CQDDHVML-PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + + + M    + P+ +TYN+L++    +  + + + L  EM S    P+ +T+N +I+ 
Sbjct: 816  LELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISA 875

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +S    +A  L  EL      P   T+  +I    K G+ ++A KI   M + G  P+
Sbjct: 876  LVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPN 935

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             V YN LI+   K+G ++ A  +   M ++G++ +  +   ++  LC   ++DEA     
Sbjct: 936  SVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                 G   D VSY  +I G  +  + + AL L+ EMK R I P  +TYNA+I  L  +G
Sbjct: 996  ELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAG 1055

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            K + A+ M  EL   G+ P   T+N +I G    G  ++A     KM+     P+  T  
Sbjct: 1056 KVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFA 1115

Query: 365  ILLSGLCREGILE 377
             L +   R G++ 
Sbjct: 1116 QLPNKYPRAGLVH 1128



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 225/513 (43%), Gaps = 74/513 (14%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M    C PD +TYNTI+  L ++G+++        MKK  L P+  T   L+ G  + G 
Sbjct: 646  MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGR 704

Query: 61   LKEAMRVV------------------------------------DLMTQNKSLPDVWTYN 84
            +++A++VV                                    +++  N    D     
Sbjct: 705  VEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVML 764

Query: 85   MLINGWCN-AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
             LI   C     L+      K  ++L + P + +YN L++    S  + +A +L +++  
Sbjct: 765  PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824

Query: 144  HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             G  PN  T+N+++  + K  +I+K   +   M   G  P+ +T+N +I A  K+ N+ +
Sbjct: 825  AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884

Query: 204  AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
            A                               LD  Y L++      +     +YG LI 
Sbjct: 885  A-------------------------------LDLYYELMSG----DFSPTPCTYGPLID 909

Query: 264  GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
            G  +  ++ +A+K+++EM +    P++  YN +I G  +SG+ + A ++  ++++ G+ P
Sbjct: 910  GLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRP 969

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            D  ++  ++   C  G++++A+Q+  ++      PD V+ N +++GL +   L++AL  F
Sbjct: 970  DLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLF 1029

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                 +G + D  TYN LI  L    +++ A  +  E++   L P  +TY A+      S
Sbjct: 1030 SEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLS 1089

Query: 444  GRLEEA-QKFTSIMVETGKINHQVVQPNTSKTP 475
            G  ++A   F  +MV     N +      +K P
Sbjct: 1090 GNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYP 1122



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 110/205 (53%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +GC P++V YN +++   K G+++   +L   M K+G+ P+  +Y ILV   C  G 
Sbjct: 927  MLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGR 986

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + EA++  + +      PD  +YN +ING   +  L+EA  L  EM++  + PD+ TYN 
Sbjct: 987  IDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNA 1046

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI     +G+   A K+ +EL   G++P+  T+N +I+ +   G  D+A  + + M   G
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAF 205
             SP+  T+  L +   +AG +   F
Sbjct: 1107 CSPNTETFAQLPNKYPRAGLVHNPF 1131



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 27/278 (9%)

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH--- 333
           ++D M+++ I  +  TY  +   LS  G   +A   L ++ + G I +  ++N +IH   
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL 212

Query: 334 -GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
            GFC+E     AL+ + +M+ +  KP + T + L+  L R G   K +         G  
Sbjct: 213 PGFCNE-----ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLR 267

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +  TY   I +L + RR++DA+G+  EM+++  GPD  TY  +  AL  +G+L++A++ 
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327

Query: 453 TSIMVETG----KINHQVVQPNTSKTPE-----------EID---PSSISYSEKINEHCS 494
              M  +     ++ +  +     K  +           E+D   P  ++Y+  I   C 
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            G    A  + +    KGI  N  TY  ++ GL+K R+
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARR 425


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 268/536 (50%), Gaps = 14/536 (2%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P    Y   + A  K   + +  +L + MK   + P    YN+L+ G CK+  +K+A ++
Sbjct: 550  PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQL 609

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             D M   + LP + TYN LI+G+C  G  E++F++R+ M++  + P ++T+NTL+   F+
Sbjct: 610  FDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFK 669

Query: 128  SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            +G   +A  ++ E+ + G  P+A T +I+   Y    K D A  +     ++G   +  T
Sbjct: 670  AGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYT 729

Query: 188  YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
             + L++A CK G +E+A  ++     KGL  N +  NT++     +  L  A M +++  
Sbjct: 730  CSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAME 789

Query: 248  KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            K+G   D ++Y  LI  +        A +  ++MK + + PS  TYN +I G  +  + +
Sbjct: 790  KQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 849

Query: 308  QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            +  D+L E+  +G +P+  ++ T+I+  C   ++ +A      M ++   P++   N+L+
Sbjct: 850  KCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLI 909

Query: 368  SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             G C +G +E A +F      KG  ++ VTYNTLI  L    +L +A  +L E+  K L 
Sbjct: 910  DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLK 969

Query: 428  PDRYTYAAIHTALVESGRLEEAQKF-----TSIMVETGKINHQVVQPNTSKTPE------ 476
            PD +TY ++ +    +G ++          TS +  T K  H ++   T +  E      
Sbjct: 970  PDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIF 1029

Query: 477  ---EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                + P  + Y+  ++ +   G    A  + ++  +K I ++K+TY +L+ G +K
Sbjct: 1030 GEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 1085



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 258/520 (49%), Gaps = 21/520 (4%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  +T+NT+L  LFK G + +  ++L++MK QG VP+  T++IL  GY        A+ V
Sbjct: 655  PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGV 714

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
             +    +    + +T ++L+N  C  G +E+A  +     +  L+P+ V YNT+I+ +  
Sbjct: 715  YETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSR 774

Query: 128  SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             G  + A   ID +++ G+KP+ + +N +I+ +C+ G ++ A + V  M+  G SP   T
Sbjct: 775  KGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVET 834

Query: 188  YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
            YN LI    +    ++ F ++  M   G   N ++  T+++ LC   KL EA ++     
Sbjct: 835  YNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 894

Query: 248  KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             RG   +   Y  LI G     K   A +  +EM ++ I  +  TYN +I GLS +GK  
Sbjct: 895  DRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLA 954

Query: 308  QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            +A DML E+ + G+ PD  T+N++I G+   G V++ +  + +M     KP + T ++L+
Sbjct: 955  EAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI 1014

Query: 368  SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            S   +EGI E   K F    L+    D + YN ++        ++ AF L  +M EK +G
Sbjct: 1015 SLCTKEGI-ELTKKIFGEMSLQP---DLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIG 1070

Query: 428  PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
             D+ TY ++    ++ G+L E +     M                    E++P + +Y  
Sbjct: 1071 LDKTTYNSLILGQLKVGKLCEVRSLIDEM-----------------KAREMEPEADTYDI 1113

Query: 488  KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             +  HC    Y  A   + E ++KG+ ++      L++GL
Sbjct: 1114 IVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGL 1153



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 238/467 (50%), Gaps = 13/467 (2%)

Query: 12   TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            T + +L+AL K+G++ +  ++L     +GLVPN   YN ++ GY + G L  A   +D M
Sbjct: 729  TCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAM 788

Query: 72   TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             +    PD   YN LI  +C  G +E A +   +M+   + P V TYN LI  +   GR 
Sbjct: 789  EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGY---GRK 845

Query: 132  ME---AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
             E    F L+ E++++G  PN V++  +I   CK  K+ +A  + R+ME+ G SP+   Y
Sbjct: 846  YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIY 905

Query: 189  NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            N LID  C  G +E+AFR  + M +KG+++N +T NT++  L    KL EA  +L   S+
Sbjct: 906  NMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISR 965

Query: 249  RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            +G   D  +Y +LI+GY       R + L++EMK   I P+  TY+ +I     S  T++
Sbjct: 966  KGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-----SLCTKE 1020

Query: 309  AIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
             I++  ++  +  + PD   +N ++H +   G ++KA     +M+EKS   D  T N L+
Sbjct: 1021 GIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLI 1080

Query: 368  SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             G  + G L +          +    ++ TY+ ++   C+ +    A+    EM+EK L 
Sbjct: 1081 LGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLL 1140

Query: 428  PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             D      + + L E  R +EA+   S M    K+   +V  + S T
Sbjct: 1141 LDVCIGDELVSGLKEEWRSKEAENVISEM-NGRKLGDVIVDEDLSAT 1186



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 70/135 (51%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            PD + YN +L      G +++  +L   M ++ +  ++TTYN L+ G  K+G L E   +
Sbjct: 1036 PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 1095

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +D M   +  P+  TY++++ G C       A+   +EM+   LL DV   + L++   E
Sbjct: 1096 IDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKE 1155

Query: 128  SGRSMEAFKLIDELD 142
              RS EA  +I E++
Sbjct: 1156 EWRSKEAENVISEMN 1170


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 241/460 (52%), Gaps = 15/460 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G  P+ V+ + +++     G++     + + + K G  PN  T   LV G+C    
Sbjct: 97  LEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHK 156

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEA+   D +       +  +Y  LING C  G    A ++ +++E   +  DVV Y+T
Sbjct: 157 VKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYST 216

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A++L  E+    I P  VT N +I  YC  G+  +A  ++R M    
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  T+N L+DA CK G ++EA   + VM ++G+  + +T ++++          + Y
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM----------DGY 326

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+N  +K  +      Y  +I G+ + +  ++AL L+ EM+ R+I P T TYN++I GL
Sbjct: 327 CLVNEVNKAKH-----VYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGL 381

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+   A ++++E+  SG   D  T+N++I   C    V+KA+    K+ ++  + D+
Sbjct: 382 CKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDM 441

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T NIL+ GLC++G L+ A   F+  ++KG  +   TY  +I+ LC E  L +A  LLS+
Sbjct: 442 YTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSK 501

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ME+    PD  T   I  AL E+ + E A+K    M+  G
Sbjct: 502 MEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARG 541



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 212/435 (48%), Gaps = 37/435 (8%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P V+ +  +++   +         L  +L+ +GIKPN V+ +I+I  YC  G++  A  I
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              + + G+ P+ +T  TL+   C    ++EA    D +   G   N ++  T+++ LC 
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +   A  +L     +    D V Y T+I G  +D+  N A +L+ EM  ++I P+  T
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
            N++I+G    G+ ++A  +L E++   + PD  TFN ++   C EG++++A      M+
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 353 EKSFKPDIVT--------C------------NILLSGLCREGILEKALKFFRSWILKGKA 392
           ++   PD+VT        C            +I+++G C+  +++KAL  F     +  A
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIA 368

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            D+VTYN+LI  LCK  R+  A+ L+ EM +     D  TY ++  AL ++  +++A   
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIAL 428

Query: 453 TSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG 512
                   KI  Q +Q +             +Y+  I+  C QGR KDA  IF++   KG
Sbjct: 429 VK------KIKDQGIQLDMY-----------TYNILIDGLCKQGRLKDAQVIFQDLLIKG 471

Query: 513 IAINKSTYMNLMNGL 527
             +   TY  ++NGL
Sbjct: 472 YNLTVWTYTIMINGL 486



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 160/295 (54%), Gaps = 24/295 (8%)

Query: 2   EGFGCL---------PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILV 52
           E FG L         PD  T+N ++DAL K+GK+ E +  ++ M K+G++P+  TY+ L+
Sbjct: 264 EAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 323

Query: 53  SGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
            GYC +  + +A  V               Y+++ING+C   M+++A  L  EM   ++ 
Sbjct: 324 DGYCLVNEVNKAKHV---------------YSIVINGFCKIKMVDKALSLFYEMRCRRIA 368

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD VTYN+LI+   +SGR   A++L+DE+ + G   + +T+N +I   CK   +DKA  +
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIAL 428

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           V+ +++ G   D  TYN LID  CK G +++A  +   +  KG  +   T   +++ LC 
Sbjct: 429 VKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCL 488

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
           E  L+EA  LL+     G   D V+  T+I   F ++K  RA KL  EM  R ++
Sbjct: 489 EGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 175/342 (51%), Gaps = 20/342 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +EG     D V Y+TI+D L K   +N+  +L S+M  + + P   T N L+ GYC +G 
Sbjct: 202 IEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQ 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA  ++  M      PDV+T+N+L++  C  G ++EA      M    ++PDVVTY++
Sbjct: 262 FKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSS 321

Query: 121 L--------------------INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
           L                    IN F +     +A  L  E+    I P+ VT+N +I   
Sbjct: 322 LMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGL 381

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK G+I  A ++V  M ++G   D +TYN+LIDA CK  ++++A  ++  +  +G++++ 
Sbjct: 382 CKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDM 441

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T N ++  LC + +L +A ++      +GY L   +Y  +I G   +   N A  L  +
Sbjct: 442 YTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSK 501

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
           M++   +P   T   +I  L ++ K E+A  +L E++  G++
Sbjct: 502 MEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 174/361 (48%), Gaps = 6/361 (1%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P  + +  ++ +  K  +      +   +   G+K N ++L+ +++  C   ++  A+ 
Sbjct: 68  APSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFS 127

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +     K GY+ + ++  TL+ G+  + K   AL   D +       +  +Y  +I GL 
Sbjct: 128 IFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLC 187

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G+T  A+ ML ++    +  D   ++TII G C +  V  A + +++M+ K   P +V
Sbjct: 188 KIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVV 247

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+ G C  G  ++A    R  +LK    D  T+N L+ +LCKE ++++A   ++ M
Sbjct: 248 TLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVM 307

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE----E 477
            ++ + PD  TY+++         + +A+   SI++  G    ++V    S   E     
Sbjct: 308 MKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVIN-GFCKIKMVDKALSLFYEMRCRR 366

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           I P +++Y+  I+  C  GR   A ++ +E R  G   +  TY +L++ L K    + KA
Sbjct: 367 IAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHH-VDKA 425

Query: 538 V 538
           +
Sbjct: 426 I 426


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 236/460 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  T+N +++   + G  +    + + + K+G  P   T+N L+ G C  G 
Sbjct: 87  MELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGH 146

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   D +       D  +Y  LING C  G +  A +L K ++   + P+ V YN 
Sbjct: 147 IHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 206

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++    +AF L  ++    I P+  T+N +I  +    K++ A  +   M++  
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKEN 266

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  T+N L+D  CK G + +A  ++ +M +  +K + +T N+++   C   K+++A 
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAK 326

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +S +  G   +   Y T++ G+ + +  + A+ L++EM+ R+I+P+  TY+++I GL
Sbjct: 327 DIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGL 386

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+   A+ +++E+   G  P+  T+++I+   C    V+KA+     + ++  +PD+
Sbjct: 387 CKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDM 446

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  IL+ GLC+ G LE A   F   ++KG  +D   Y  +I   C +   + A  LLS+
Sbjct: 447 YTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSK 506

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ME+    P+  TY  +  +L E    + A+K    M+  G
Sbjct: 507 MEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 231/487 (47%), Gaps = 54/487 (11%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+      P  + +N +++    A     A  L ++ME   +  D  T+N LIN F + G
Sbjct: 51  LLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLG 110

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
            +  +F +  ++ + G  P A+T N +IK  C +G I +A      +   GF  D V+Y 
Sbjct: 111 LNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYG 170

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI+  CK G +  A +++  +  K ++ N +  N I+  +C  K +++A+ L +    +
Sbjct: 171 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
               D  +Y  LI+G+    K N A+ L+++MK+  I P+ +T+N ++ G  + GK   A
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA 290

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA---------------LQFHNKMVE- 353
             +L  +++  + PD  T+N+++ G+CS  +V KA               +Q +  MV  
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350

Query: 354 -------------------KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
                              +   P++VT + L+ GLC+ G +  ALK       +G+  +
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FT 453
            VTY++++ +LCK   ++ A  LL+ ++++ + PD YTY  +   L +SGRLE+AQ  F 
Sbjct: 411 IVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            ++V+   ++                    +Y+  I   C +G +  AL +  +    G 
Sbjct: 471 DLLVKGYNLD------------------VYAYTVMIQGFCDKGFFDKALALLSKMEDNGC 512

Query: 514 AINKSTY 520
             N  TY
Sbjct: 513 IPNAKTY 519



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 174/315 (55%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYN ++       KLN   DL + MKK+ + PN  T+NILV G+CK G + +A  V
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + +M ++   PDV TYN L++G+C+   + +A  +   M S  ++ +V  Y T++N F +
Sbjct: 294 LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK 353

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                EA  L +E+    I PN VT++ +I   CK G+I  A K+V  M + G  P+ VT
Sbjct: 354 IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVT 413

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++++DA CK  ++++A  ++  +  +G++ +  T   ++  LC   +L++A  +     
Sbjct: 414 YSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLL 473

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +GY LD  +Y  +I G+      ++AL L  +M++   +P+  TY  +I  L +  + +
Sbjct: 474 VKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDEND 533

Query: 308 QAIDMLNELLQSGMI 322
            A  +L E++  G++
Sbjct: 534 TAEKLLREMIVRGLL 548



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 114/216 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + +   Y T+++   K   ++E  +L  +M+ + ++PN  TY+ L+ G CKLG 
Sbjct: 332 MASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR 391

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+++VD M      P++ TY+ +++  C    +++A  L   ++   + PD+ TY  
Sbjct: 392 IFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTI 451

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +SGR  +A  + ++L   G   +   + +MI+ +C +G  DKA  ++  ME+NG
Sbjct: 452 LIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNG 511

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             P+  TY  +I +  +    + A +++  M  +GL
Sbjct: 512 CIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 18/193 (9%)

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
           F++ ++ K+  P     N +LS L +      AL   +   L G   D  T+N LI+   
Sbjct: 48  FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFS 107

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +      +F + +++ +K   P   T+  +   L   G + +A  F   +V  G      
Sbjct: 108 QLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQG------ 161

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                           +SY   IN  C  GR   ALQ+ +    K +  N   Y  +++ 
Sbjct: 162 -----------FHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDN 210

Query: 527 LIKRRKSISKAVD 539
           + K  K ++ A D
Sbjct: 211 MCK-AKLVNDAFD 222


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 259/555 (46%), Gaps = 55/555 (9%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y+  +  + K+G + + + L   M   GL+P    Y  L+ GYC+   +++   ++  M 
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +   +   +TY  ++ G C++G L+ A+ + KEM +    P+VV Y TLI  F ++ R  
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A +++ E+ E GI P+   +N +I    K  ++D+A   +  M ENG  P+  TY   I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
               +A     A + +  M   G+  N +    +++  C ++K+ EA     S   +G  
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGIL 589

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  +Y  L+ G F+++K + A +++ EM+ + I P  F+Y  +I G S+ G  ++A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            +E+++ G+ P+   +N ++ GFC  G++EKA +  ++M  K   P+ VT   ++ G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL-------------- 418
            G L +A + F    LKG   DS  Y TL+   C+   +E A  +               
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769

Query: 419 ------------SEMEEKKLG------------PDRYTYAAIHTALVESGRLEEAQKFTS 454
                       +E++ + L             P+  TY  +   L + G LE A+    
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK---- 825

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                 ++ HQ+   N       + P+ I+Y+  +N +   GR  +   +F+E    GI 
Sbjct: 826 ------ELFHQMQNAN-------LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 515 INKSTYMNLMNGLIK 529
            +   Y  ++N  +K
Sbjct: 873 PDHIMYSVIINAFLK 887



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 276/564 (48%), Gaps = 41/564 (7%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G   +P       +LDAL +  +L+   D+   M ++ +V +  TY++L+  +C+ G ++
Sbjct: 179 GLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ 238

Query: 63  ---------------------EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
                                 A+++ + M     +P  +TY++LI+G C    LE+A  
Sbjct: 239 LGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKS 298

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWY 160
           L  EM+SL +  D  TY+ LI+   + GR+ +A K L+ E+  HGI      ++  I   
Sbjct: 299 LLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
            KEG ++KA  +   M  +G  P    Y +LI+  C+  N+ + + ++  M ++ + ++ 
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T  T++  +C    LD AY ++      G   + V Y TLI  + ++ +   A+++  E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           MKE+ I P  F YN++I GLS++ + ++A   L E++++G+ P+  T+   I G+    +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
              A ++  +M E    P+ V C  L++  C++  + +A   +RS + +G   D+ TY  
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L++ L K  +++DA  +  EM  K + PD ++Y  +     + G +++A      MVE G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 461 KINHQVV----------QPNTSKTPEEID--------PSSISYSEKINEHCSQGRYKDAL 502
              + ++               K  E +D        P++++Y   I+ +C  G   +A 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 503 QIFEETRQKGIAINKSTYMNLMNG 526
           ++F+E + KG+  +   Y  L++G
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDG 741



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 260/566 (45%), Gaps = 31/566 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   DN TY+ ++D L K    +  + L+ +M   G+      Y+  +    K G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  + D M  +  +P    Y  LI G+C    + + + L  EM+   ++    TY T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     SG    A+ ++ E+   G +PN V +  +IK + +  +   A ++++ M+E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD   YN+LI    KA  M+EA   +  M   GLK N  T    +       +   A 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    + G   ++V    LI  Y + EK   A   +  M ++ I+    TY  ++ GL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ K + A ++  E+   G+ PD  ++  +I+GF   G ++KA    ++MVE+   P++
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  N+LL G CR G +EKA +      +KG   ++VTY T+I   CK   L +AF L  E
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 421 MEEKKLGPDRYTYAAIHTALVES-GRLEEAQKFTSIM--------VETGKIN---HQVVQ 468
           M+ K L PD + Y    T LV+   RL + ++  +I           T   N   + V +
Sbjct: 723 MKLKGLVPDSFVY----TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778

Query: 469 PNTSKTPEEI-------------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
              ++   E+              P+ ++Y+  I+  C +G  + A ++F + +   +  
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838

Query: 516 NKSTYMNLMNGLIK--RRKSISKAVD 539
              TY +L+NG  K  RR  +    D
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFD 864



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 234/494 (47%), Gaps = 16/494 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   YN+++  L K  +++E R  L +M + GL PN  TY   +SGY +      A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + V  M +   LP+      LIN +C    + EA    + M    +L D  TY  L+N 
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++ +  +A ++  E+   GI P+  ++ ++I  + K G + KA  I   M E G +P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YN L+   C++G +E+A  ++D M  KGL  N +T  TI+   C    L EA+ L +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D   Y TL+ G  R     RA+ ++   K +    ST  +NA+I  + + G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFG 780

Query: 305 KTEQAIDMLNELLQSGM----IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           KTE   ++LN L+         P++ T+N +I   C EG +E A +  ++M   +  P +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   LL+G  + G   +    F   I  G   D + Y+ +I++  KE     A  L+ +
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 421 MEEKKLGPDR-----YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
           M  K    D       T  A+ +   + G +E A+K    MV    I      P+++   
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI------PDSATVI 954

Query: 476 EEIDPSSISYSEKI 489
           E I+ S IS ++++
Sbjct: 955 ELINESCISSNQRV 968



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 74/282 (26%)

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKAL---------------------------------- 345
           G   D   F  +  G+ ++G +E+A+                                  
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 346 -QFHNKMVEKSFKPDIVTCNILLSGLCREGILE---------------------KALKFF 383
              +  MVE++   D+ T ++L+   CR G ++                      ALK  
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            S I KG      TY+ LI  LCK +RLEDA  LL EM+   +  D +TY+ +   L++ 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 444 GRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEEIDPSSISY 485
              + A+     MV  G                   +  +            + P + +Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  I  +C +   +   ++  E +++ I I+  TY  ++ G+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 27/232 (11%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFK-----PDIVTCNILLSGLCREGILEKALK 381
           +F+ +    C+ G  EKAL    +M+E+++        IV C+    G   +G+L   L 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGIL- 157

Query: 382 FFRSWILKGKAVDSVTY----------------NTLISSLCKERRLEDAFGLLSEMEEKK 425
            F  +I KG   ++V                    L+ +L +  RL+  + +   M E+ 
Sbjct: 158 -FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKF---TSIMVETGKIN-HQVVQPNTSKTPEEIDPS 481
           +  D  TY  +  A   +G ++  +     T     T  +N    ++   S   + + P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             +Y   I+  C   R +DA  +  E    G++++  TY  L++GL+K R +
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 225/422 (53%), Gaps = 3/422 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V ++ +L  + K    + V  L  +M+  G+  +  TYNI+++  C+      A+ 
Sbjct: 66  LPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALS 125

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           VV  M +    PDV T + LING+C    +  A  L  +ME ++   DVV YNT+I+ F 
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFC 185

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++G    A  L   ++  G++ + VT+N ++   C  G+   A +++R+M      P+ +
Sbjct: 186 KTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVI 245

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+  LI+A  + G   EA +  + M R+ +  +  T N+++H LC   ++DEA  +L+  
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLM 305

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + D V+Y TLI G+ + ++ +   KL  EM +R ++  T T+N +I G  Q+G+ 
Sbjct: 306 VTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRP 365

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A ++ + +   G  P+  T++ +++G C   +VEKAL     M +   + DI T NI+
Sbjct: 366 DAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIV 422

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C  G +E A   F S   KG   D VTY T+IS  C++R  + A  L  +M+E  L
Sbjct: 423 IHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482

Query: 427 GP 428
            P
Sbjct: 483 LP 484



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 207/384 (53%), Gaps = 3/384 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  TYN +++ L +  +      ++  M K G  P+  T + L++G+C+   
Sbjct: 95  MEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +V  M + +   DV  YN +I+G+C  G++  A  L   ME   +  D VTYN+
Sbjct: 155 VFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNS 214

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     SGR  +A +L+ ++    I PN +T   +I  + +EGK  +A K    M    
Sbjct: 215 LVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC 274

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN++I   C  G ++EA +++D+M  KG   + +T NT+++  C  K++DE  
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   S+RG  +D V++ T+I GYF+  + + A +++  M  R   P+  TY+ +++GL
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGL 391

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             + + E+A+ +   + +S M  D TT+N +IHG C  G VE A      +  K  +PD+
Sbjct: 392 CYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDV 451

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           VT   ++SG CR+ + +KA   +R
Sbjct: 452 VTYTTMISGFCRKRLWDKADFLYR 475



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 204/432 (47%), Gaps = 32/432 (7%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ +   M Q++ LP +  ++ L++    +   +    L   ME   +  D+ TYN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN      R + A  ++ ++ + G +P+ VT + +I  +C+  ++  A  +V  MEE  
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D V YNT+ID  CK G +  A  +   M R G++ +T+T N+++  LCC  +  +A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     R    + +++  LI  + R+ K   A K ++EM  R I P  FTYN+MI GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF---- 356
              G+ ++A  +L+ ++  G  PD  T+NT+I+GFC   +V++  +   +M ++      
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 357 ----------------------------KPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
                                       +P+I T +ILL GLC    +EKAL  F S   
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQK 409

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
               +D  TYN +I  +C    +EDA+ L   +  K L PD  TY  + +        ++
Sbjct: 410 SEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDK 469

Query: 449 AQKFTSIMVETG 460
           A      M E G
Sbjct: 470 ADFLYRKMQEDG 481



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 214/436 (49%), Gaps = 20/436 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L+EA  L   M   + LP +V ++ L++   +S        L   ++  GI  +  T+NI
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   C+  +   A  +V  M + G+ PD VT ++LI+  C+   +  A  ++  M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            K++ +  NTI+   C    ++ A +L     + G   D V+Y +L+TG     + + A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  +M  R I+P+  T+ A+I    + GK  +A     E+++  + PD  T+N++IHG 
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  GQV++A Q  + MV K   PD+VT N L++G C+   +++  K  R    +G  VD+
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VT+NT+I    +  R + A  + S M  +   P+  TY+ +   L  + R+E+A      
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKAL----- 401

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
                     V+  +  K+  E+D ++  Y+  I+  C  G  +DA  +F     KG+  
Sbjct: 402 ----------VLFESMQKSEMELDITT--YNIVIHGMCMIGNVEDAWDLFCSLSFKGLEP 449

Query: 516 NKSTYMNLMNGLIKRR 531
           +  TY  +++G  ++R
Sbjct: 450 DVVTYTTMISGFCRKR 465



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 146/330 (44%), Gaps = 17/330 (5%)

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           N++EA  +   M +     + +  + +L  +   K  D    L ++    G   D  +Y 
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            +I    R  +   AL +  +M +    P   T +++I G  Q  +   A+D+++++ + 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
               D   +NTII GFC  G V  AL    +M     + D VT N L++GLC  G    A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
            +  R  +++    + +T+  LI++  +E +  +A     EM  + + PD +TY ++   
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L   G+++EA++   +MV  G                   P  ++Y+  IN  C   R  
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCF-----------------PDVVTYNTLINGFCKTKRVD 331

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  ++  E  Q+G+ ++  T+  ++ G  +
Sbjct: 332 EGTKLVREMSQRGLVVDTVTFNTIIQGYFQ 361



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 22/248 (8%)

Query: 290 TFTYNAMIWGLSQSGK-----TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           T  + +  WG + + K      ++AID+   ++QS  +P    F+ ++         +  
Sbjct: 29  TAPFISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLV 88

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           +   + M       D+ T NI+++ LCR      AL      +  G   D VT ++LI+ 
Sbjct: 89  ISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            C+  R+  A  L+S+MEE +   D   Y  I     ++G +  A      +V  G++  
Sbjct: 149 FCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNA------LVLFGRMER 202

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
             V+ +T           ++Y+  +   C  GR  DA ++  +   + I  N  T+  L+
Sbjct: 203 DGVRADT-----------VTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALI 251

Query: 525 NGLIKRRK 532
           N  ++  K
Sbjct: 252 NAFVREGK 259



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY+ +L  L    ++ +   L   M+K  +  + TTYNI++ G C +G +++A
Sbjct: 376 GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDA 435

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
             +   ++     PDV TY  +I+G+C   + ++A  L ++M+   LLP
Sbjct: 436 WDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 222/396 (56%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++  ++D L KKG++   + L+ ++  +G  P+  TYN L++GY ++  +     ++ LM
Sbjct: 190 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 249

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N    +V TY MLI  +  +  +EEA +L  EM    + PDV  Y ++IN   + G  
Sbjct: 250 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 309

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             AF L DE+ E  + PNA T+  +I   CK G++  A  +V +M+  G   + V +NTL
Sbjct: 310 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 369

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D  CK G ++EA R+ ++M +KG +++  T N I    C   + +EA  LL +  +RG 
Sbjct: 370 MDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGV 429

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + VS+  LI  Y +++    A +L+  M+++   PS  TYNA I    + GK E+A  
Sbjct: 430 APNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYK 489

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++NE+ + G++PD  T+ ++I G  + G V++AL+  N+M +     ++VT  +++SGL 
Sbjct: 490 LINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLS 549

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           ++G  ++A K +     +G   D   Y++LI+SL K
Sbjct: 550 KDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 202/377 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +TYNT+L+   +   +  V ++LS M+K  +  N TTY +L+  Y +   ++EA
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D M +    PDV+ Y  +IN  C  G ++ AF L  EM   +L+P+  TY  LIN 
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 337

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G    A  +++++   G+  N V  N ++  YCK+G ID+A ++   M++ GF  D
Sbjct: 338 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 397

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T N +    C++   EEA R++  M  +G+  N ++ + ++   C E+   EA  L  
Sbjct: 398 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 457

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K+G     V+Y   I  Y +  K   A KL +EM+ER +MP T+TY ++I G   SG
Sbjct: 458 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 517

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+++ NE+ Q G+  +  T+  II G   +G+ ++A + +++M ++   PD    +
Sbjct: 518 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYS 577

Query: 365 ILLSGLCREGILEKALK 381
            L++ L + G L   L+
Sbjct: 578 SLIASLHKVGPLVSGLE 594



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 216/434 (49%), Gaps = 6/434 (1%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
            L AL + G +    + L  M   G+     ++  +V G CK G +  A  ++D +    
Sbjct: 159 FLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG 218

Query: 76  SLPDVWTYNMLINGWC---NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
             P V TYN L+NG+    + G + E   L   ME   +  +V TY  LI  +  S +  
Sbjct: 219 FKPSVITYNTLLNGYIEIKDVGGVNEILSL---MEKNVVDYNVTTYTMLIEWYSRSSKIE 275

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA KL DE+ + GI+P+   +  +I W CK G + +A  +   M E    P+  TY  LI
Sbjct: 276 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 335

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           +  CKAG M+ A  M++ M  KG+ +N +  NT++   C +  +DEA  L N   ++G+ 
Sbjct: 336 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 395

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           +D  +   + +G+ R  +   A +L   M+ER + P+  +++ +I    +     +A  +
Sbjct: 396 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 455

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
              + + G  P   T+N  I  +C +G++E+A +  N+M E+   PD  T   L+ G   
Sbjct: 456 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 515

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G +++AL+ F      G   + VTY  +IS L K+ R ++AF L  EM ++ + PD   
Sbjct: 516 SGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGI 575

Query: 433 YAAIHTALVESGRL 446
           Y+++  +L + G L
Sbjct: 576 YSSLIASLHKVGPL 589



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 201/402 (50%), Gaps = 17/402 (4%)

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG      + + ++ + GI+    +   ++   CK+G++ +A  ++  +   GF P  +T
Sbjct: 166 SGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVIT 225

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL++   +  ++     ++ +M +  +  N  T   ++       K++EA  L +   
Sbjct: 226 YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEML 285

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K+G   D   Y ++I    +     RA  L+DEM ER+++P+ +TY A+I G  ++G+ +
Sbjct: 286 KKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMK 345

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  M+N++   G+  +   FNT++ G+C +G +++AL+  N M +K F+ D  TCNI+ 
Sbjct: 346 AAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIA 405

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SG CR    E+A +   +   +G A + V+++ LI   CKE+   +A  L   ME+K   
Sbjct: 406 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 465

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P   TY A      + G++EEA K  + M E G +                 P + +Y+ 
Sbjct: 466 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM-----------------PDTYTYTS 508

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+   + G    AL++F E  Q G+  N  TY  +++GL K
Sbjct: 509 LIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 550



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 197/404 (48%), Gaps = 22/404 (5%)

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           NR F+S  S+E F   D   + G + +  +    +    + G ++   + +R M ++G  
Sbjct: 131 NRMFDS--SLEVF---DYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIE 185

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
               ++  ++D  CK G +  A  +MD +  KG K + IT NT+L+     K +     +
Sbjct: 186 IRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEI 245

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+   K     +  +Y  LI  Y R  K   A KL+DEM ++ I P  + Y ++I    +
Sbjct: 246 LSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCK 305

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G  ++A  + +E+ +  ++P+  T+  +I+G C  G+++ A    N M  K    + V 
Sbjct: 306 FGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVI 365

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ G C++G++++AL+       KG  +D+ T N + S  C+  R E+A  LL  ME
Sbjct: 366 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 425

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E+ + P+  +++ +     +     EA++   +M + GK                  PS 
Sbjct: 426 ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA-----------------PSV 468

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++Y+  I  +C +G+ ++A ++  E +++G+  +  TY +L++G
Sbjct: 469 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 129/230 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   + V +NT++D   KKG ++E   L + M+++G   +  T NI+ SG+C+   
Sbjct: 354 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNR 413

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA R++  M +    P+V ++++LI+ +C      EA RL K ME     P VVTYN 
Sbjct: 414 REEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNA 473

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I R+ + G+  EA+KLI+E+ E G+ P+  T+  +I      G +D+A ++   M + G
Sbjct: 474 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLG 533

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + + VTY  +I    K G  +EAF++ D M ++G+  +    ++++ +L
Sbjct: 534 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASL 583



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 95/166 (57%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ V+++ ++D   K+    E R L   M+K+G  P+  TYN  +  YCK G 
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA ++++ M +   +PD +TY  LI+G   +G ++ A  L  EM  L L  +VVTY  
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
           +I+   + GR+ EAFKL DE+++ GI P+   ++ +I    K G +
Sbjct: 544 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 137/299 (45%), Gaps = 17/299 (5%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           +  D +  + + A K+G+ +DE S    +    R       ++   +M +  I     ++
Sbjct: 132 RMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSW 191

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            A++ GL + G+  +A  +++EL+  G  P   T+NT+++G+     V    +  + M +
Sbjct: 192 TAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEK 251

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
                ++ T  +L+    R   +E+A K F   + KG   D   Y ++I+  CK   ++ 
Sbjct: 252 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 311

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           AF L  EM E++L P+ YTY A+     ++G ++ A+   + M   G             
Sbjct: 312 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG------------- 358

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               +D + + ++  ++ +C +G   +AL++    +QKG  I+  T   + +G  +  +
Sbjct: 359 ----VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNR 413



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   + VTY  I+  L K G+ +E   L  +M K+G+VP+   Y+ L++   K+G 
Sbjct: 529 MPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGP 588

Query: 61  LKEAMR-VVD 69
           L   +  VVD
Sbjct: 589 LVSGLENVVD 598


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 262/525 (49%), Gaps = 18/525 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  + YN IL  L K GK++E   +  +MKK    PN +TYNIL+   C+ G L  A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCA 396

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M +    P+V T N++++  C +  L+EA  + ++M+     PD +T+ +LI+ 
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDG 456

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A+K+ +++ +   + N++ +  +IK +   G+ +   KI ++M     SPD
Sbjct: 457 LGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPD 516

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
               NT +D   KAG  E+   M + +  +    +  + + ++H L      +E Y L  
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G  LD  +Y  +I G+ +  K N+A +L +EMK +   P+  TY ++I GL++  
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A  +  E     +  +   ++++I GF   G++++A     ++++K   P++ T N
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWN 696

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL  L +   + +AL  F+S        + VTY  LI+ LCK R+   AF    EM+++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P   +Y  + + L ++G + EA          G +                 P S  
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-----------------PDSAC 799

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  I    +  R  DA  +FEETR++G+ I+  T + L++ L K
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHK 844



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 233/492 (47%), Gaps = 35/492 (7%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++D L + GKL+   +L   M+K GL PN  T NI+V   CK   L EA  +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAI 434

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      PD  T+  LI+G    G +++A+++ ++M       + + Y +LI  FF 
Sbjct: 435 FEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFN 494

Query: 128 SGRSMEAFK-----------------------------------LIDELDEHGIKPNAVT 152
            GR  +  K                                   + +E+      P+A +
Sbjct: 495 HGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARS 554

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           ++I+I    K G  ++  ++  +M+E G   D   YN +ID  CK G + +A+++++ M 
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            KG +   +T  +++  L    +LDEAYML   A  +   L+ V Y +LI G+ +  + +
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A  + +E+ ++ + P+ +T+N+++  L ++ +  +A+     + +    P++ T+  +I
Sbjct: 675 EAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +G C   +  KA  F  +M ++  KP  ++   ++SGL + G + +A   F  +   G  
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794

Query: 393 VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            DS  YN +I  L    R  DAF L  E   + L     T   +   L ++  LE+A   
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIV 854

Query: 453 TSIMVETGKINH 464
            +++ ETGK  H
Sbjct: 855 GAVLRETGKARH 866



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 257/564 (45%), Gaps = 53/564 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  F   P    Y T++ A       + +  L   M++ G  P    +  L+ G+ K G 
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-- 118
           +  A+ ++D M  +    D+  YN+ I+ +   G ++ A++   E+E+  L PD VTY  
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278

Query: 119 ---------------------------------NTLINRFFESGRSMEAFKLIDELDEHG 145
                                            NT+I  +  +G+  EA+ L++     G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+ + +N ++    K GK+D+A ++   M+++  +P+  TYN LID  C+AG ++ AF
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAF 397

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            + D M + GL  N  T+N ++  LC  +KLDEA  +      +    DE+++ +LI G 
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGL 457

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +  + + A K++++M +     ++  Y ++I      G+ E    +  +++     PD 
Sbjct: 458 GKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDL 517

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
              NT +      G+ EK      ++  + F PD  + +IL+ GL + G   +  + F S
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +G  +D+  YN +I   CK  ++  A+ LL EM+ K   P   TY ++   L +  R
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           L+EA     ++ E  K              + I+ + + YS  I+     GR  +A  I 
Sbjct: 638 LDEAY----MLFEEAK-------------SKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
           EE  QKG+  N  T+ +L++ L+K
Sbjct: 681 EELMQKGLTPNVYTWNSLLDALVK 704



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 243/536 (45%), Gaps = 19/536 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +YN++L  + +    + +  +L +M   G  P+  T   +V    K   L+E   VV  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            + K  P    Y  LI  +      +    L ++M+ L   P V  + TLI  F + GR 
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             A  L+DE+    +  + V +N+ I  + K GK+D A K    +E NG  PD VTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CKA  ++EA  M + + +      T   NT++       K DEAY LL     +G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
               ++Y  ++T   +  K + AL++++EMK +   P+  TYN +I  L ++GK + A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFE 398

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + + ++G+ P+  T N ++   C   ++++A     +M  K   PD +T   L+ GL 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLG 458

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD-- 429
           + G ++ A K +   +      +S+ Y +LI +     R ED   +  +M  +   PD  
Sbjct: 459 KVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQ 518

Query: 430 ---RYTYAAIHTALVESGR--LEE--AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS- 481
               Y          E GR   EE  +++F         + H +++   +    E+  S 
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 482 --------SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + +Y+  I+  C  G+   A Q+ EE + KG      TY ++++GL K
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 250/542 (46%), Gaps = 33/542 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD+  Y+ ++  L   G+  E   LL+D   +G VPN   YN L+ GYC  G L+ A
Sbjct: 174 GCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELA 233

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M     LP+V TY  LI G+C +G +E A  L   M    L P+VVTY TLI  
Sbjct: 234 IDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQG 293

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    AF+L+  ++  G+ PN  T  ++I   CK G+I++A + + ++ + G   +
Sbjct: 294 QCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVN 353

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y ++IDA CK+G  + A  +M  +  +G   +    ++++  LC E KL EA  LLN
Sbjct: 354 QVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLN 413

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   + V +  LI  + R+ +++    + D M    + P   TY   I    Q G
Sbjct: 414 DMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDG 473

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A  M+ +++  G+ P+ TT+NT+I G+ + G V +A      M++   KP+  +  
Sbjct: 474 RMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYT 533

Query: 365 ILLSGLCREG---------------ILEKALKFFRSWILKGKAVD-SVTYNTLISSLCKE 408
           +LL  L ++                +  K L+     ++K +    S  Y+  I  L K 
Sbjct: 534 VLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKV 593

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            RLE+A   L  M+   L P    Y  +         L+EA +F   MV+   +      
Sbjct: 594 DRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYL------ 647

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P   SY   I   C +G +  A  IF +   K    ++  +  L++GL+
Sbjct: 648 -----------PRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLL 696

Query: 529 KR 530
           ++
Sbjct: 697 QK 698



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 209/449 (46%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY T+++A    G L   +  LS + + GL P+   Y   V GYC+ G    A R+  LM
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            Q       +TY  L+ G C AGM+ EA  +   M      PD   Y+ +++    +GR+
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L+ +    G  PN   +N +I  YC  G ++ A  I + M+  G  P+  TY  L
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CK+G +E A  +   M   GL  N +T  T++   C E  L+ A+ LL+S    G 
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +E +   LI    +  +   A +    + ++ I  +   Y +MI  L +SGK + A +
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ +++  G +PD   ++++I G C E ++ +A+   N M+E   + + V   IL+    
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHL 435

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           RE   +            G   D VTY   I S C++ R+EDA  ++ +M +  + P+  
Sbjct: 436 REFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT 495

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +       G + +A      M++ G
Sbjct: 496 TYNTLIKGYANLGLVSQAFSSLKNMIDNG 524



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 224/471 (47%), Gaps = 22/471 (4%)

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
           +  +P +   N L+      GML +   L   M     + ++ TY TLIN +  +G    
Sbjct: 37  SAPVPPIRCLNTLLMALARHGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPA 92

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A + +  L   G+ P++  +   +  YC+ G    AC++   M + G +    TY  L+ 
Sbjct: 93  AKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQ 152

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             C AG + EA  +   M   G   ++   + ++H LC   +  EA  LL  A  +G+  
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVP 212

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           +   Y  LI GY        A+ ++  M+ +  +P+  TY  +I G  +SGK E+A+ + 
Sbjct: 213 NVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLY 272

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           + ++++G+ P+  T+ T+I G CSEG +E A +  + M      P+  TC +L+  LC+ 
Sbjct: 273 SRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKH 332

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G +E+A +F  S + KG  V+ V Y ++I +LCK  + + A  L+ ++  +   PD + Y
Sbjct: 333 GRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMY 392

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQV---------VQPNTSKTPEEID----- 479
           +++   L    +L EA    + M+E+G   + V         ++   S +P+ I      
Sbjct: 393 SSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAA 452

Query: 480 ----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
               P  ++Y+  I  +C  GR +DA  +  +    G+  N +TY  L+ G
Sbjct: 453 AGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG 503



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 202/432 (46%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+  Y + +    + G       L   M ++G      TY  L+ G C  G ++EA
Sbjct: 104 GLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREA 163

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V   M  +   PD   Y+++++G C AG   EA  L  +      +P+V  YN LI+ 
Sbjct: 164 MAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDG 223

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G    A  +   +   G  PN  T+  +I  +CK GK+++A  +   M E G +P+
Sbjct: 224 YCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPN 283

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTY TLI   C  G++E AFR++  M   GL  N  T   ++  LC   +++EA   L 
Sbjct: 284 VVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLG 343

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  ++G  +++V Y ++I    +  K + A  L  ++     +P    Y+++I GL +  
Sbjct: 344 SLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCREN 403

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K  +AI +LN++++SG+  +   F  +I     E + +      ++M     KPD+VT  
Sbjct: 404 KLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYT 463

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           + +   C++G +E A       I  G   +  TYNTLI        +  AF  L  M + 
Sbjct: 464 VFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDN 523

Query: 425 KLGPDRYTYAAI 436
              P+  +Y  +
Sbjct: 524 GCKPNDESYTVL 535



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 226/524 (43%), Gaps = 21/524 (4%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P     NT+L AL + G L+++  L + M     V N  TY  L++ YC  G L  A R
Sbjct: 40  VPPIRCLNTLLMALARHGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPAAKR 95

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  + +    PD   Y   + G+C  G+   A RL   M          TY  L+    
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +G   EA  +   +   G  P++  ++IM+   C  G+  +A  ++ +    GF P+  
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LID  C  G++E A  +   M  KG   N  T   ++   C   K++ A +L +  
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   + V+Y TLI G   +     A +L   M+   + P+ +T   +I  L + G+ 
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A   L  L+Q G+  ++  + ++I   C  G+ + A     K++ + F PD    + L
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSL 395

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLCRE  L +A+      I  G   ++V +  LI    +E R +    +   M    +
Sbjct: 396 IDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGV 455

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY     +  + GR+E+A+     M++ G      V+PN +           +Y+
Sbjct: 456 KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHG------VRPNLT-----------TYN 498

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
             I  + + G    A    +     G   N  +Y  L+  L+K+
Sbjct: 499 TLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKK 542



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/519 (25%), Positives = 217/519 (41%), Gaps = 88/519 (16%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G +P+   YN ++D     G L    D+   M+ +G +PN  TY  L+ G+CK G ++
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            AM +   M +    P+V TY  LI G C+ G LE AFRL   ME+  L P+  T   LI
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + GR  EA + +  L + GIK N V +  MI   CK GK D A  +++ +   GF 
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMM---------------------------------- 208
           PD   Y++LID  C+   + EA  ++                                  
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446

Query: 209 -DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY-- 265
            D M   G+K + +T    + + C + ++++A  ++      G   +  +Y TLI GY  
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506

Query: 266 --------------------------------------FRDEKANRALKLW--------- 278
                                                 + D  A+ ++ LW         
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVAD-SISLWKIVDMKVLE 565

Query: 279 ---DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
              +E+ + Q   +++ Y+  I  LS+  + E+A   L  +  + + P E  +  +I   
Sbjct: 566 ELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECC 625

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                +++AL+F + MV++++ P + +   ++  LC EG    A   F   + K    D 
Sbjct: 626 YRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDE 685

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
           + +  LI  L ++    D   LLS MEE+   P    Y+
Sbjct: 686 IAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 17/346 (4%)

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY TLI+A C AG++  A R +  + R GL  ++    + +   C       A  L    
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +RG      +Y  L+ G         A+ ++  M      P +  Y+ M+ GL  +G+ 
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A+ +L + +  G +P+   +N +I G+CS G +E A+     M  K   P++ T   L
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+ G +E+A+  +   I  G A + VTY TLI   C E  LE AF LL  ME   L
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+ +T   +  AL + GR+EEAQ+F   +V+ G   +QV+                 Y+
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVI-----------------YT 358

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I+  C  G++  A  + ++   +G   +   Y +L++GL +  K
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENK 404



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 150/350 (42%), Gaps = 21/350 (6%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P     NTL+ A  + G + +    M+ +  +    N  T  T+++  C    L  A   
Sbjct: 41  PPIRCLNTLLMALARHGMLSD----MESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRH 96

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+S  + G   D  +Y + + GY R      A +L+  M +R    + FTY A++ GL  
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +G   +A+ +   +   G  PD   ++ ++HG C  G+  +A+      + K F P++  
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ G C  G LE A+  F+    KG   +  TY  LI   CK  ++E A  L S M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E  L P+  TY  +       G LE A +    M   G                 + P+ 
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG-----------------LAPNE 319

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +    I+  C  GR ++A Q      QKGI +N+  Y ++++ L K  K
Sbjct: 320 WTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGK 369


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 259/532 (48%), Gaps = 23/532 (4%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG------LVPNRTTYNILVSGY 55
           E + C P  V  N++L+ L K GK++   +L   M ++G      LV +  +  I+V G 
Sbjct: 156 ELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGL 215

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           C +G ++E  +++D    N  +P+V  YN++I+G+C  G L+ A R+ +E++    LP +
Sbjct: 216 CDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTL 275

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            TY  LI+ F ++G+     +L++E++  G+  N    N +I    K G +DKA +++R 
Sbjct: 276 ETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRM 335

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M E G  PD  TYN LI+ +C  G ++EA   ++    + L  N  +   ++H  C +  
Sbjct: 336 MTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGD 395

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
              A  +L   ++ G   D VSYG  I G     + + AL + ++M E+ + P    YN 
Sbjct: 396 YVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNV 455

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++ GL + G+   A  +L+E+L   + PD   + T++ GF    +++KA +    ++ K 
Sbjct: 456 LMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKG 515

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P +V  N+++ GLC+ G +  A+ +     +   A D  T++T+I    K+  L+ A 
Sbjct: 516 IDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSAL 575

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            +  +M ++K  P+   Y ++     +   +  A+K    M                   
Sbjct: 576 KMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAM-----------------QS 618

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++P+ ++Y+  I      G+ + A   FE         N +T+  L+NGL
Sbjct: 619 FNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL 670



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 251/533 (47%), Gaps = 9/533 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+P+ V YN I+D   KKG L     +  ++K +G +P   TY  L+ G+CK G  +
Sbjct: 233 GNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQ 292

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
              ++++ M       +V  +N +I+     G++++A  + + M  +   PD+ TYN LI
Sbjct: 293 VVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILI 352

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N     GR  EA + ++   E  + PN  ++  ++  YCK+G    A  ++  + E G  
Sbjct: 353 NFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK 412

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD V+Y   I  +   G ++ A  + + M  KG+  +    N ++  LC + +   A +L
Sbjct: 413 PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLL 472

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+         D   Y TL+ G+ R+ + ++A +L++ +  + I P    YN MI GL +
Sbjct: 473 LSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCK 532

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK   A+  +N++  +   PDE T +T+I G+  +  ++ AL+   +M+++ +KP++V 
Sbjct: 533 CGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVA 592

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L++G C+   + +A K FR+        + VTY  LI    K  + E A      M 
Sbjct: 593 YTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELML 652

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ--VVQPNTSKTPEEIDP 480
                P+  T+  +   L            T++++E  + N +  ++    +   E    
Sbjct: 653 MNNCLPNDTTFHYLINGLTNITN-------TTLLIEKNEENDRSLILDFFATMISEGWSQ 705

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
              +Y+  I   C  G    A  +  +  +KG  ++   +  L++GL +  KS
Sbjct: 706 VIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKS 758



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 253/566 (44%), Gaps = 59/566 (10%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           +NV Y+++L  + K    +E+  +L DMK +   P     N ++  Y + G++ +A+++ 
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 69  DLMTQ-NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPDVVTYNTL 121
            ++ +     P V   N L+N     G ++ A  L  +M        L L+ D  +   +
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +    + G+  E  KLID+   +G  PN V +N++I  YCK+G + +A ++   ++  GF
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P   TY  LID  CKAG  +   ++++ M   GL +N    N+I+        +D+A  
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           ++   ++ G   D  +Y  LI       +   A +  +  KER ++P+ F+Y  ++    
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYC 391

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           + G    A DML ++ ++G  PD  ++   IHG  + G+++ AL    KM+EK   PD  
Sbjct: 392 KQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQ 451

Query: 362 TCNILLSGLCREGI-----------------------------------LEKALKFFRSW 386
             N+L+SGLC++G                                    L+KA + F   
Sbjct: 452 IYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVV 511

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + KG     V YN +I  LCK  ++ DA   +++M+     PD YT++ +    V+   L
Sbjct: 512 MSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDL 571

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           + A K        G++  Q  +PN            ++Y+  IN  C       A ++F 
Sbjct: 572 DSALKM------FGQMMKQKYKPNV-----------VAYTSLINGFCKIADMSRAEKVFR 614

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
             +   +  N  TY  L+ G  K  K
Sbjct: 615 AMQSFNLEPNVVTYTILIGGFSKTGK 640



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 226/477 (47%), Gaps = 12/477 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TYN +++     G++ E  + L   K++ L+PN+ +Y  L+  YCK G 
Sbjct: 336 MTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGD 395

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  ++  + +    PD+ +Y   I+G    G ++ A  +R++M    + PD   YN 
Sbjct: 396 YVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNV 455

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + GR   A  L+ E+ +  ++P+A  +  ++  + +  ++DKA ++   +   G
Sbjct: 456 LMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKG 515

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V YN +I   CK G M +A   ++ M       +  T +T++     +  LD A 
Sbjct: 516 IDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSAL 575

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     K+ Y  + V+Y +LI G+ +    +RA K++  M+   + P+  TY  +I G 
Sbjct: 576 KMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGF 635

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS------------EGQVEKALQFH 348
           S++GK E+A      +L +  +P++TTF+ +I+G  +            E      L F 
Sbjct: 636 SKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFF 695

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
             M+ + +   I T N ++  LC+ G+++ A       + KG  +DSV ++ L+  LC+ 
Sbjct: 696 ATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQT 755

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
            + ++   ++S    K      + Y+      +  G+  EA      ++E  K++ Q
Sbjct: 756 GKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLNLIEDSKLSDQ 812


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 253/530 (47%), Gaps = 26/530 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  +YNT++D   K+G++++  +L   M +Q + P+  TYN L+ G CK   + ++
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV++ M      P+  TYN LI G+  AGM +E+ R+ KEM S  L+P VV  N+ I+ 
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
                R  EA  + D +   G KPN ++++ ++  Y  EG       +V  M   G  P+
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              +N LI+A  + G M++A  + + M  KG+  +T+T  T++ +LC   +LD+A    N
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 391

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY-NAMIWGLSQS 303
                G    E  Y  LI G     +  +A +L  EM  + I P    Y +++I  L + 
Sbjct: 392 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKE 451

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +  D+++ ++Q+G  P+  TFN+++ G+C  G +E+A    + M     +P+    
Sbjct: 452 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ G C+ G ++ AL  FR  + KG    SV YN ++  L + RR   A  +  EM E
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTPEEID 479
                   TY  +   L  +   +EA    +K  ++ V+   I   +V            
Sbjct: 572 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV------------ 619

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                    I+     GR ++A ++F      G+     TY  +++ LIK
Sbjct: 620 ---------ISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIK 660



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 237/459 (51%), Gaps = 1/459 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P  V  N+ + AL +  ++ E +D+   M  +G  PN  +Y+ L+ GY   G 
Sbjct: 253 MSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGC 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
                 +V+LM     +P+   +N+LIN +   GM+++A  + ++M++  ++PD VT+ T
Sbjct: 313 FANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+     GR  +A    + + + G+ P+   +  +I+  C  G++ KA +++  M    
Sbjct: 373 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD 432

Query: 181 FSPDCVTY-NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             P  V Y +++I+   K G + E   +MD+M + G + N +T N+++   C    ++EA
Sbjct: 433 IPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 492

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + LL++ +  G   +   YGTL+ GY ++ + + AL ++ +M  + + P++  YN ++ G
Sbjct: 493 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHG 552

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L Q+ +T  A  M +E+++SG      T+  ++ G C     ++A     K+   + K D
Sbjct: 553 LFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 612

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           I+T NI++S + + G  ++A + F +    G      TYN +IS+L KE   E+A  L  
Sbjct: 613 IITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFI 672

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +E+    PD      I   L++   + +A  + SI+ E
Sbjct: 673 SVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDE 711



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 243/488 (49%), Gaps = 18/488 (3%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P   TYNIL+  Y ++   + A+ V   + +    PDV +YN LI+G+   G +++A+ L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             +M    + PDVVTYN+LI+   ++   +++ ++++++ + GI+PN  T+N +I  Y  
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G   ++ ++ + M  +G  P  V  N+ I A C+   ++EA  + D M  KG K N I+
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            +T+LH    E        L+N    +G   +   +  LI  Y R    ++A+ ++++M+
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            + ++P T T+  +I  L + G+ + A+   N ++  G+ P E  +  +I G C+ G++ 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 343 KALQFHNKMVEKSFKPDIVT-CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           KA +  ++M+ K   P  V   + +++ L +EG + +        +  G+  + VT+N+L
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           +   C    +E+AF LL  M    + P+ Y Y  +     ++GR+++A      M+  G 
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG- 538

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                           + P+S+ Y+  ++      R   A ++F E  + G  ++  TY 
Sbjct: 539 ----------------VKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYG 582

Query: 522 NLMNGLIK 529
            ++ GL +
Sbjct: 583 VVLGGLCR 590



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 219/459 (47%), Gaps = 18/459 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P ++TYN+LI+ +      E A  +   +    L PDV +YNTLI+ F + G   +A++L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
             ++ E  + P+ VT+N +I   CK  ++ K+ +++  M + G  P+  TYN+LI     
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           AG  +E+ R+   M   GL    +  N+ +H LC   ++ EA  + +S   +G   + +S
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TL+ GY  +        L + M  + I+P+   +N +I   ++ G  ++A+ +  ++ 
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             GMIPD  TF T+I   C  G+++ AL   N MV+    P       L+ G C  G L 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 378 KALKFFRSWILKGKAVDSVTY-NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           KA +     + K      V Y +++I++L KE R+ +   ++  M +    P+  T+ ++
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                  G +EEA      M   G                 I+P+   Y   ++ +C  G
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIG-----------------IEPNCYIYGTLVDGYCKNG 522

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           R  DAL +F +   KG+      Y  +++GL + R++ +
Sbjct: 523 RIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTA 561



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 215/449 (47%), Gaps = 1/449 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++Y+T+L     +G    +  L++ M  +G+VPN   +NIL++ Y + G + +A
Sbjct: 292 GPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKA 351

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M + + M     +PD  T+  +I+  C  G L++A      M  + + P    Y  LI  
Sbjct: 352 MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQG 411

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               G  ++A +LI E+    I P  V + + +I    KEG++ +   I+  M + G  P
Sbjct: 412 CCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRP 471

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VT+N+L++  C  GNMEEAF ++D M   G++ N     T++   C   ++D+A  + 
Sbjct: 472 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 531

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G     V Y  ++ G F+  +   A K++ EM E     S  TY  ++ GL ++
Sbjct: 532 RDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRN 591

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
             T++A  +L +L    +  D  TFN +I      G+ ++A +    +      P + T 
Sbjct: 592 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTY 651

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+++S L +E   E+A   F S    G+A DS   N ++  L K+  +  A   LS ++E
Sbjct: 652 NLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDE 711

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             L  +  T + + +     G+  E  K 
Sbjct: 712 NNLTLEASTISLLASLFSREGKCREHIKL 740



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 1/384 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD VT+ T++ +L + G+L++     + M   G+ P+   Y  L+ G C  G 
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  ++ ++M ++   P V  ++ +IN     G + E   +   M      P+VVT+N
Sbjct: 418 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 477

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +L+  +   G   EAF L+D +   GI+PN   +  ++  YCK G+ID A  + R+M   
Sbjct: 478 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 537

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  V YN ++    +A     A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 538 GVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEA 597

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL          D +++  +I+   +  +   A +L+  +    ++P+  TYN MI  
Sbjct: 598 NMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISN 657

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +    E+A ++   + +SG  PD    N I+     + +V KA  + + + E +   +
Sbjct: 658 LIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLE 717

Query: 360 IVTCNILLSGLCREGILEKALKFF 383
             T ++L S   REG   + +K  
Sbjct: 718 ASTISLLASLFSREGKCREHIKLL 741


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 246/527 (46%), Gaps = 18/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY  ++ AL K+G + +   L   M+ +G+      YN L++GYCK G 
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  ++  M +    P   +Y+ LI G C  G L     L +EM    +  +  T+  
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 483

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +  EA +L D++ +  + PN VT N+MI+ YC  G I KA ++   M E G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY +LI   C    + +A   +  +      +N  +L  +L+    E +  E Y
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + RG  LD VS+  ++    +     ++  L+ EMKE+ + P    Y  MI  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+     QA++  ++++  G  P+  T   +I+  C  G +  A     +M+  +  P+ 
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N  L     EG +EKA K   S +L+G     V++N LI  LCK  ++++A  L+S+
Sbjct: 724 FTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSK 782

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           + E    PD  +Y+ I   L + G + +A +  + M+  G                 + P
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG-----------------LKP 825

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++Y+  I      G    AL I+    + G+  N  TY  L++G+
Sbjct: 826 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 248/547 (45%), Gaps = 52/547 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y   + A  +   L+  R L+  M+ +G+  +   YN+L+ G CK   ++EA+ V 
Sbjct: 197 DEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVK 256

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           ++M       D  TY  L+ G+C    LE A R+  +M  L  +P     + +I+   + 
Sbjct: 257 NVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK 316

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
               EAF L  +L + G+ PN   +N +I   CK  + D A ++ + M   G  P+ VTY
Sbjct: 317 ELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 376

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LI A CK G +E+A  + D M  KG+K+     N++++  C +  LD A  LL+   K
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G      SY  LI G  R+   +  ++L  EM ER I  + +T+ A+I G  +  K ++
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  + ++++ S +IP+E TFN +I G+C  G + KA Q +++MVE   KPD  T   L+S
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 369 GLC-----------------------------------REGILEKALKFFRSWILKGKAV 393
           GLC                                   REG   +    +    ++G  +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V++  ++ +  K+   E +  L  EM+E+ + PD   Y  +  AL +   + +A    
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             MV  G                   P++++++  IN  C  G    A  + +E     +
Sbjct: 677 DQMVVDG-----------------YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV 719

Query: 514 AINKSTY 520
             NK TY
Sbjct: 720 LPNKFTY 726



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 185/401 (46%), Gaps = 18/401 (4%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           GI  N  T + ++    K  +   A  +   M ++G   D   Y   I A C++ N++ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M  +G+K + +  N +++ LC   ++ EA  + N     G   DEV+Y TL+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + R E+   AL++  +M     +PS    + MI  L +    E+A  +  +L   GM+P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +N +I   C   + + A +   +M  +  +P+ VT  IL+  LC+ G++E AL  F 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               KG  V    YN+LI+  CK+  L+ A GLLS M ++ L P   +Y+ +   L  +G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 445 RLEEAQKFTSIMVE----------TGKINHQVVQPNTSKTPEEID--------PSSISYS 486
            L    +    M E          T  IN         +     D        P+ ++++
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I  +C  G  + A Q++++  + G+  +  TY +L++GL
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+ +N  T + IL +L   ++   A  L +   + G +LDE  Y   I  Y      + A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             L   M+   +  S   YN +++GL ++ + ++A+++ N ++  G+  DE T+ T+++G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC   ++E AL+  + M+   F P    C+ ++  L ++ ++E+A          G   +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
              YN LI  LCK  R +DA  L  EM  + L P+  TYA +  AL + G +E+A     
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 455 IMVETG----------KINHQVVQPNTSK--------TPEEIDPSSISYSEKINEHCSQG 496
            M + G           IN    Q +  +          E + P++ SYS  I   C  G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                +++  E  ++GIA N  T+  L+NG  K +K
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 149/335 (44%), Gaps = 34/335 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PDN TY +++  L     +++  + ++D++    V N  +   L+ G+ + G 
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E   + D M       D+ ++ +++         E++  L +EM+   + PD + Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA---CK--IVRN 175
           +I+   +    ++A    D++   G  PN VTH ++I   CK G +  A   CK  +  N
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 176 MEENGFSPDC-----------------------------VTYNTLIDANCKAGNMEEAFR 206
           +  N F+ +C                             V++N LI   CKAG ++EA  
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAID 778

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +M  +   G   + I+ +TI+H LC    +++A+ L N    +G   D V+Y   I    
Sbjct: 779 LMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCN 838

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
              ++++AL ++  M    + P+  TY A++ G+S
Sbjct: 839 VHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 258/555 (46%), Gaps = 55/555 (9%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y+  +  + K+G + + + L   M   GL+P    Y  L+ GYC+   +++   ++  M 
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +   +   +TY  ++ G C++G L+ A+ + KEM +    P+VV Y TLI  F ++ R  
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A +++ E+ E GI P+   +N +I    K  ++D+A   +  M ENG  P+  TY   I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
               +A     A + +  M   G+  N +    +++  C + K+ EA     S   +G  
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  +Y  L+ G F+++K + A +++ EM+ + I P  F+Y  +I G S+ G  ++A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            +E+++ G+ P+   +N ++ GFC  G++EKA +  ++M  K   P+ VT   ++ G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL-------------- 418
            G L +A + F    LKG   DS  Y TL+   C+   +E A  +               
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769

Query: 419 ------------SEMEEKKLG------------PDRYTYAAIHTALVESGRLEEAQKFTS 454
                       +E++ + L             P+  TY  +   L + G LE A+    
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK---- 825

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                 ++ HQ+   N       + P+ I+Y+  +N +   GR  +   +F+E    GI 
Sbjct: 826 ------ELFHQMQNAN-------LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 515 INKSTYMNLMNGLIK 529
            +   Y  ++N  +K
Sbjct: 873 PDHIMYSVIINAFLK 887



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/564 (25%), Positives = 277/564 (49%), Gaps = 41/564 (7%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G   +P       +LDAL +  +L+   D+   M ++ +V +  TY++L+  +C+ G ++
Sbjct: 179 GLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ 238

Query: 63  ---------------------EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
                                 A+++ + M     +P  +TY++LI+G C    LE+A  
Sbjct: 239 LGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKS 298

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWY 160
           L  EM+SL +  D  TY+ LI+   + GR+ +A K L+ E+  HGI      ++  I   
Sbjct: 299 LLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
            KEG ++KA  +   M  +G  P    Y +LI+  C+  N+ + + ++  M ++ + ++ 
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T  T++  +C    LD AY ++      G   + V Y TLI  + ++ +   A+++  E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           MKE+ I P  F YN++I GLS++ + ++A   L E++++G+ P+  T+   I G+    +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
              A ++  +M E    P+ V C  L++  C++G + +A   +RS + +G   D+ TY  
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L++ L K  +++DA  +  EM  K + PD ++Y  +     + G +++A      MVE G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 461 KINHQVV----------QPNTSKTPEEID--------PSSISYSEKINEHCSQGRYKDAL 502
              + ++               K  E +D        P++++Y   I+ +C  G   +A 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 503 QIFEETRQKGIAINKSTYMNLMNG 526
           ++F+E + KG+  +   Y  L++G
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDG 741



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 235/494 (47%), Gaps = 16/494 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   YN+++  L K  +++E R  L +M + GL PN  TY   +SGY +      A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + V  M +   LP+      LIN +C  G + EA    + M    +L D  TY  L+N 
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++ +  +A ++  E+   GI P+  ++ ++I  + K G + KA  I   M E G +P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YN L+   C++G +E+A  ++D M  KGL  N +T  TI+   C    L EA+ L +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D   Y TL+ G  R     RA+ ++   K +    ST  +NA+I  + + G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFG 780

Query: 305 KTEQAIDMLNELLQSGM----IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           KTE   ++LN L+         P++ T+N +I   C EG +E A +  ++M   +  P +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   LL+G  + G   +    F   I  G   D + Y+ +I++  KE     A  L+ +
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 421 MEEKKLGPDR-----YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
           M  K    D       T  A+ +   + G +E A+K    MV    I      P+++   
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI------PDSATVI 954

Query: 476 EEIDPSSISYSEKI 489
           E I+ S IS ++++
Sbjct: 955 ELINESCISSNQRV 968



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 74/282 (26%)

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKAL---------------------------------- 345
           G   D   F  +  G+ ++G +E+A+                                  
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 346 -QFHNKMVEKSFKPDIVTCNILLSGLCREGILE---------------------KALKFF 383
              +  MVE++   D+ T ++L+   CR G ++                      ALK  
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            S I KG      TY+ LI  LCK +RLEDA  LL EM+   +  D +TY+ +   L++ 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 444 GRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEEIDPSSISY 485
              + A+     MV  G                   +  +            + P + +Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  I  +C +   +   ++  E +++ I I+  TY  ++ G+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 27/232 (11%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFK-----PDIVTCNILLSGLCREGILEKALK 381
           +F+ +    C+ G  EKAL    +M+E+++        IV C+    G   +G+L   L 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGIL- 157

Query: 382 FFRSWILKGKAVDSVTY----------------NTLISSLCKERRLEDAFGLLSEMEEKK 425
            F  +I KG   ++V                    L+ +L +  RL+  + +   M E+ 
Sbjct: 158 -FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKF---TSIMVETGKIN-HQVVQPNTSKTPEEIDPS 481
           +  D  TY  +  A   +G ++  +     T     T  +N    ++   S   + + P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             +Y   I+  C   R +DA  +  E    G++++  TY  L++GL+K R +
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 222/396 (56%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++  ++D L KKG++   + L+ ++  +G  P+  TYN L++GY ++  +     ++ LM
Sbjct: 194 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 253

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +N    +V TY MLI  +  +  +EEA +L  EM    + PDV  Y ++IN   + G  
Sbjct: 254 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 313

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             AF L DE+ E  + PNA T+  +I   CK G++  A  +V +M+  G   + V +NTL
Sbjct: 314 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 373

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D  CK G ++EA R+ ++M +KG +++  T N I    C   + +EA  LL +  +RG 
Sbjct: 374 MDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGV 433

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             + VS+  LI  Y +++    A +L+  M+++   PS  TYNA I    + GK E+A  
Sbjct: 434 APNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYK 493

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++NE+ + G++PD  T+ ++I G  + G V++AL+  N+M +     ++VT  +++SGL 
Sbjct: 494 LINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLS 553

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           ++G  ++A K +     +G   D   Y++LI+SL K
Sbjct: 554 KDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 202/377 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +TYNT+L+   +   +  V ++LS M+K  +  N TTY +L+  Y +   ++EA
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D M +    PDV+ Y  +IN  C  G ++ AF L  EM   +L+P+  TY  LIN 
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 341

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G    A  +++++   G+  N V  N ++  YCK+G ID+A ++   M++ GF  D
Sbjct: 342 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 401

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T N +    C++   EEA R++  M  +G+  N ++ + ++   C E+   EA  L  
Sbjct: 402 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 461

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K+G     V+Y   I  Y +  K   A KL +EM+ER +MP T+TY ++I G   SG
Sbjct: 462 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 521

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+++ NE+ Q G+  +  T+  II G   +G+ ++A + +++M ++   PD    +
Sbjct: 522 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYS 581

Query: 365 ILLSGLCREGILEKALK 381
            L++ L + G L   L+
Sbjct: 582 SLIASLHKVGPLVSGLE 598



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 216/434 (49%), Gaps = 6/434 (1%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
            L AL + G +    + L  M   G+     ++  +V G CK G +  A  ++D +    
Sbjct: 163 FLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG 222

Query: 76  SLPDVWTYNMLINGWC---NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
             P V TYN L+NG+    + G + E   L   ME   +  +V TY  LI  +  S +  
Sbjct: 223 FKPSVITYNTLLNGYIEIKDVGGVNEILSL---MEKNVVDYNVTTYTMLIEWYSRSSKIE 279

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA KL DE+ + GI+P+   +  +I W CK G + +A  +   M E    P+  TY  LI
Sbjct: 280 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 339

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           +  CKAG M+ A  M++ M  KG+ +N +  NT++   C +  +DEA  L N   ++G+ 
Sbjct: 340 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 399

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           +D  +   + +G+ R  +   A +L   M+ER + P+  +++ +I    +     +A  +
Sbjct: 400 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 459

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
              + + G  P   T+N  I  +C +G++E+A +  N+M E+   PD  T   L+ G   
Sbjct: 460 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 519

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G +++AL+ F      G   + VTY  +IS L K+ R ++AF L  EM ++ + PD   
Sbjct: 520 SGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGI 579

Query: 433 YAAIHTALVESGRL 446
           Y+++  +L + G L
Sbjct: 580 YSSLIASLHKVGPL 593



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 201/402 (50%), Gaps = 17/402 (4%)

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG      + + ++ + GI+    +   ++   CK+G++ +A  ++  +   GF P  +T
Sbjct: 170 SGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVIT 229

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL++   +  ++     ++ +M +  +  N  T   ++       K++EA  L +   
Sbjct: 230 YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEML 289

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K+G   D   Y ++I    +     RA  L+DEM ER+++P+ +TY A+I G  ++G+ +
Sbjct: 290 KKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMK 349

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  M+N++   G+  +   FNT++ G+C +G +++AL+  N M +K F+ D  TCNI+ 
Sbjct: 350 AAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIA 409

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SG CR    E+A +   +   +G A + V+++ LI   CKE+   +A  L   ME+K   
Sbjct: 410 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 469

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P   TY A      + G++EEA K  + M E G +                 P + +Y+ 
Sbjct: 470 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM-----------------PDTYTYTS 512

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+   + G    AL++F E  Q G+  N  TY  +++GL K
Sbjct: 513 LIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 554



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 197/404 (48%), Gaps = 22/404 (5%)

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           NR F+S  S+E F   D   + G + +  +    +    + G ++   + +R M ++G  
Sbjct: 135 NRMFDS--SLEVF---DYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIE 189

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
               ++  ++D  CK G +  A  +MD +  KG K + IT NT+L+     K +     +
Sbjct: 190 IRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEI 249

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+   K     +  +Y  LI  Y R  K   A KL+DEM ++ I P  + Y ++I    +
Sbjct: 250 LSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCK 309

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G  ++A  + +E+ +  ++P+  T+  +I+G C  G+++ A    N M  K    + V 
Sbjct: 310 FGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVI 369

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+ G C++G++++AL+       KG  +D+ T N + S  C+  R E+A  LL  ME
Sbjct: 370 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 429

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           E+ + P+  +++ +     +     EA++   +M + GK                  PS 
Sbjct: 430 ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA-----------------PSV 472

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++Y+  I  +C +G+ ++A ++  E +++G+  +  TY +L++G
Sbjct: 473 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 129/230 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   + V +NT++D   KKG ++E   L + M+++G   +  T NI+ SG+C+   
Sbjct: 358 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNR 417

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA R++  M +    P+V ++++LI+ +C      EA RL K ME     P VVTYN 
Sbjct: 418 REEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNA 477

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I R+ + G+  EA+KLI+E+ E G+ P+  T+  +I      G +D+A ++   M + G
Sbjct: 478 FIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLG 537

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            + + VTY  +I    K G  +EAF++ D M ++G+  +    ++++ +L
Sbjct: 538 LNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASL 587



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 95/166 (57%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ V+++ ++D   K+    E R L   M+K+G  P+  TYN  +  YCK G 
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA ++++ M +   +PD +TY  LI+G   +G ++ A  L  EM  L L  +VVTY  
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
           +I+   + GR+ EAFKL DE+++ GI P+   ++ +I    K G +
Sbjct: 548 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   + VTY  I+  L K G+ +E   L  +M K+G+VP+   Y+ L++   K+G 
Sbjct: 533 MPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGP 592

Query: 61  LKEAMR-VVD 69
           L   +  VVD
Sbjct: 593 LVSGLENVVD 602


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 239/455 (52%), Gaps = 5/455 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  +T+NT+LD+ FK G L  V  +  +MK++ +  +  TYNIL++G+ K G ++EA
Sbjct: 270 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 329

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R    M ++      +++N LI G+C  G+ ++A+ +  EM +  + P   TYN  I  
Sbjct: 330 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 389

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A +L+  +      P+ V++N ++  Y K GK  +A  +  ++      P 
Sbjct: 390 LCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 445

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLID  C++GN+E A R+ + M  + +  + IT  T++        L  A  + +
Sbjct: 446 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 505

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQS 303
              ++G   D  +Y T   G  R   +++A +L +EM       P    YN  I GL + 
Sbjct: 506 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 565

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +AI+   ++ + G++PD  T+ T+I G+   GQ + A   +++M+ K   P ++T 
Sbjct: 566 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 625

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +L+ G  + G LE+A ++      +G   + +T+N L+  +CK   +++A+  L +MEE
Sbjct: 626 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 685

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           + + P++Y+Y  + +   +  + EE  K    M++
Sbjct: 686 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 720



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 258/527 (48%), Gaps = 31/527 (5%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYN +++   K GK+ E R    DM++ G      ++N L+ GYCK G   +A  V D 
Sbjct: 311 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 370

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P   TYN+ I   C+ G +++A    +E+ S    PDVV+YNTL++ + + G+
Sbjct: 371 MLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGK 426

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            +EA  L D+L    I P+ VT+N +I   C+ G ++ A ++   M      PD +TY T
Sbjct: 427 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 486

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL---DEAYMLLNSAS 247
           L+    K GN+  A  + D M RKG+K +     T       E +L   D+A+ L     
Sbjct: 487 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT---RAVGELRLGDSDKAFRLHEEMV 543

Query: 248 KRGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              ++  +++ Y   I G  +     +A++   ++    ++P   TY  +I G  ++G+ 
Sbjct: 544 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 603

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A ++ +E+L+  + P   T+  +I+G    G++E+A Q+  +M ++  +P+++T N L
Sbjct: 604 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 663

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L G+C+ G +++A ++      +G   +  +Y  LIS  C   + E+   L  EM +K++
Sbjct: 664 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 723

Query: 427 GPDRYTYAAIH---------TALVESGRLEEAQKFTSIMVETGKINHQV---VQPNTSKT 474
            PD YT+ A+           AL  SG+  E Q+       +G    ++     PN    
Sbjct: 724 EPDGYTHRALFKHLEKDHESMALDSSGKQPEQQQQQQPRASSGNGEARLKLRRTPNEEHE 783

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           PE  +   + YS  +    S  RY    Q+   TR     I+K+++M
Sbjct: 784 PENYEDLPLDYSPSL--FTSLERYLPE-QLLNSTR-----IDKASFM 822



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 256/533 (48%), Gaps = 24/533 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP     N +L  L     +N+   +   M + G++P   T+N ++    K G L+  
Sbjct: 235 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 294

Query: 65  MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            ++ +++  +N    +V TYN+LING+   G +EEA R   +M          ++N LI 
Sbjct: 295 DKIWLEMKRRNIEFSEV-TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 353

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + G   +A+ + DE+   GI P   T+NI I   C  G+ID A +++ +M     +P
Sbjct: 354 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----AP 409

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V+YNTL+    K G   EA  + D +    +  + +T NT++  LC    L+ A  L 
Sbjct: 410 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 469

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +  + D ++Y TL+ G+ ++   + A +++DEM  + I P  + Y     G  + 
Sbjct: 470 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 529

Query: 304 GKTEQAIDMLNELLQSGM-IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           G +++A  +  E++ +    PD T +N  I G C  G + KA++F  K+      PD VT
Sbjct: 530 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 589

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              ++ G    G  + A   +   + K      +TY  LI    K  RLE AF   +EM+
Sbjct: 590 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 649

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++ + P+  T+ A+   + ++G ++EA ++   M E G                 I P+ 
Sbjct: 650 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-----------------IPPNK 692

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
            SY+  I+++C   ++++ +++++E   K I  +  T+  L   L K  +S++
Sbjct: 693 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESMA 745



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 40/278 (14%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            PD +TY T++    K G L+   ++  +M ++G+ P+   Y     G  +LG   +A R
Sbjct: 478 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 537

Query: 67  VVD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           + + ++  +   PD+  YN+ I+G C  G L +A   ++++  + L+PD VTY T+I  +
Sbjct: 538 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 597

Query: 126 FE-----------------------------------SGRSMEAFKLIDELDEHGIKPNA 150
            E                                   +GR  +AF+   E+ + G++PN 
Sbjct: 598 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 657

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           +THN ++   CK G ID+A + +  MEE G  P+  +Y  LI  NC     EE  ++   
Sbjct: 658 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 717

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           M  K ++ +  T   +   L  EK  D   M L+S+ K
Sbjct: 718 MLDKEIEPDGYTHRALFKHL--EK--DHESMALDSSGK 751



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 47/87 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +T+N +L  + K G ++E    L  M+++G+ PN+ +Y +L+S  C    
Sbjct: 648 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 707

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI 87
            +E +++   M   +  PD +T+  L 
Sbjct: 708 WEEVVKLYKEMLDKEIEPDGYTHRALF 734


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 233/451 (51%), Gaps = 16/451 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC----KLGWLK 62
           LP + ++N +L   F  G++ +    L DM+K        TYN+++ G C        L+
Sbjct: 99  LPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLE 158

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +AM     M  +   PD+ +Y++L++   ++G + EA  L     ++   PD++TYN L+
Sbjct: 159 QAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHAL---FSAMTCSPDIMTYNVLM 215

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + + + G++ EA  L+ E+ + G +PN  T++I+I  YCK  K+++A ++   M E+   
Sbjct: 216 DGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV 275

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM- 241
           P+ VT+NTLI   CKAG +E+A ++   M + G K   +T NT++ +LC  KK    Y  
Sbjct: 276 PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC--KKRGGVYTA 333

Query: 242 --LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L N     G     V+Y +LI G+    + + A++ +DEM E +  P+  TY+ +I G
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDG 392

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  + ++A   L ++   G  P   T+  +I+GFC  G+++ AL F  KM      P+
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            V  N L+ GLC+       L+       +G   D +TYN LIS LC   R+EDA  L  
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            M      P+  T+  +   L    ++EEA+
Sbjct: 513 GM---ACAPNVTTFNFLIRGLCAQKKVEEAR 540



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 237/457 (51%), Gaps = 9/457 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LP+  T NT+L  L + G+++    L  +M+    +P   ++NIL+ G+   G 
Sbjct: 58  MKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 117

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWC----NAGMLEEAFRLRKEMESLKLLPDVV 116
           +++A+  +  M ++ S     TYN+++ G C    +A  LE+A    KEM++  + PD+ 
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE 177

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           +Y+ L++   +SGR  EA  L   +      P+ +T+N+++  YCK G+  +A  +++ +
Sbjct: 178 SYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
            + G+ P+  TY+ +I+  CK   +EEA+ +   M       N +T NT++   C    L
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA-NRALKLWDEMKERQIMPSTFTYNA 295
           ++A  L     K G     V+Y TLI    +       A+ L+++++   + P+  TYN+
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I G   + +  +A+   +E+ +    P+  T++ +I G C   ++++A +    M    
Sbjct: 355 LIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           + P +VT   L++G C+ G L+ AL FF    L G A ++V +NTLI  LCK  R  D  
Sbjct: 414 YTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGL 473

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            LL  M  +   PD  TY  + + L  + R+E+AQ+ 
Sbjct: 474 RLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 228/474 (48%), Gaps = 29/474 (6%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N L++G  +A   ++A RL KE+ +    P+  TYN LI  F + G+  +A  +  ++  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G+ PNA T N ++   C+ G++  A K+ R M+   F P   ++N L+     AG + +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKK----LDEAYMLLNSASKRGYYLDEVSYG 259
           A   +  M +    + T T N +L  LC E K    L++A          G   D  SY 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            L++      +   A  L+  M      P   TYN ++ G  + G+T +A  ++ E+L++
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G  P+  T++ II+ +C   +VE+A +   KM+E +  P+ VT N L++G C+ G+LE A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKER-RLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           +K F      G     VTYNTLI SLCK+R  +  A  L +++E   L P   TY ++  
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVV--------------QPNTSKTPEEID----- 479
              ++ RL EA ++   M   GK    V+                  +KT E++      
Sbjct: 358 GFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYT 415

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           P+ ++Y   IN  C  G  K AL  FE+ +  G A N   +  L++GL K  ++
Sbjct: 416 PTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERA 469



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 182/340 (53%), Gaps = 5/340 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD +TYN ++D   K G+  E + L+ ++ K G  PN  TY+I+++ YCKL  ++EA 
Sbjct: 204 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 263

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M ++  +P+  T+N LI G+C AGMLE+A +L  EME +     +VTYNTLI+  
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 323

Query: 126 FES-GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +  G    A  L ++L+  G+ P  VT+N +I+ +C   ++ +A +    M E   +P+
Sbjct: 324 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPN 382

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY+ LID  CK   M+EA + ++ M   G     +T   +++  C   +L  A +   
Sbjct: 383 VITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFE 442

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + V + TLI G  + E+AN  L+L   M      P   TYN +I GL  + 
Sbjct: 443 KMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN 502

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           + E A  + + +      P+ TTFN +I G C++ +VE+A
Sbjct: 503 RVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 5/245 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKK-GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           ME  GC    VTYNT++D+L KK G +    DL + ++  GL P   TYN L+ G+C   
Sbjct: 304 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDAR 363

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            L EAM+  D M + K  P+V TY++LI+G C    ++EA +  ++M++    P VVTY 
Sbjct: 364 RLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYG 422

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LIN F + G    A    +++   G  PN V  N +I   CK  + +   +++ +M   
Sbjct: 423 GLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAE 482

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD +TYN LI   C A  +E+A R+ D M       N  T N ++  LC +KK++EA
Sbjct: 483 GCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLCAQKKVEEA 539

Query: 240 YMLLN 244
             +L+
Sbjct: 540 RNILD 544



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 148/334 (44%), Gaps = 54/334 (16%)

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            L++G     K ++AL+L+ E+      P+  TYN +I G  + G+  QA+ + +++  S
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G++P+ +T NT++ G C  GQ+  AL+   +M    F P   + NILL G    G +  A
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKER----RLEDAFGLLSEMEEKKLGPDRYTYAA 435
           L   +       +V + TYN ++  LC E     RLE A     EM+   + PD  +Y  
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181

Query: 436 IHTALVESGRLEEAQK-FTSIMVETGKINHQVV-------------------------QP 469
           + +AL +SGR+ EA   F+++      + + V+                         +P
Sbjct: 182 LLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEP 241

Query: 470 NT-------------SKTPEEID-----------PSSISYSEKINEHCSQGRYKDALQIF 505
           N               K  E  +           P++++++  I   C  G  +DA+++F
Sbjct: 242 NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 301

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            E  + G      TY  L++ L K+R  +  AVD
Sbjct: 302 AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD 335


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 224/458 (48%), Gaps = 1/458 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  TY   +  L + G+++E   ++  M+  G  P+  TY +L+   C  G 
Sbjct: 255 MESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGK 314

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +AM +   M  +   PD  TY  +++ + + G L        EME+    PDV+T+  
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N   ++G   EAF L+D + + G+ PN  T+N +I    +  ++D A  +  NME  G
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY   ID   K+G  ++A    + M  +G+  N +  N  L++L    +L EA 
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++ N     G   D V+Y  ++  Y +  + + A++L  +M E Q  P     N++I  L
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ ++A  M   L    + P   T+NT+I G   EGQV++A++    M      P+ 
Sbjct: 555 YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N +L  LC+   ++ ALK            D +T+NT+I  L  E+R+ DA  L  +
Sbjct: 615 ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ 674

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           M +K L PD  T   +   +V++G +E+A K     V 
Sbjct: 675 M-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVH 711



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/571 (26%), Positives = 257/571 (45%), Gaps = 56/571 (9%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+ V  N  L +L + G+L E + + + +K  GL P+  TYN+++  Y K G + EA
Sbjct: 469  GIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEA 528

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + ++  M++N+  PD+   N LIN    AG ++EA+++   ++ +KL P VVTYNTLI  
Sbjct: 529  IELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAG 588

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              + G+   A +L   +  +G  PN +T N ++   CK  ++D A K++  M      PD
Sbjct: 589  LGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPD 648

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +T+NT+I        + +A  +   M +K L  + +TL T+L  +     +++A+ +  
Sbjct: 649  VLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAE 707

Query: 245  SASKR-GYYLDEVSYGTLITGYFRDEKANRALKLWDEM---------------------- 281
                R G Y+D   +  L+ G        + +   D +                      
Sbjct: 708  DFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKH 767

Query: 282  --------------KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
                          KE  + P+  +YN +I G       E A ++  E+  +G  PD  T
Sbjct: 768  KQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFT 827

Query: 328  FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            +N ++      G++ +  + + +M+  S KP+ +T NI+++ L +   L+KAL  F   +
Sbjct: 828  YNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLV 887

Query: 388  LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
                +    TY  L+  L K  RLE+A  L  EM +    P+   Y  +     ++G + 
Sbjct: 888  SGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVN 947

Query: 448  EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
             A +    MV  G                 I P   SY+  +   C  GR  DAL  FE+
Sbjct: 948  TACELFKRMVREG-----------------IRPDLKSYTSLVGCLCEAGRVDDALHYFEK 990

Query: 508  TRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             +Q G+ ++   Y NLM   + R   I +A+
Sbjct: 991  LKQTGLYLDSIAY-NLMIDGLGRSHRIEEAL 1020



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 268/572 (46%), Gaps = 53/572 (9%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY  I   LF +G L +       M++ G   N  +YN L+    + G  +EA+ +   M
Sbjct: 161 TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRM 220

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + T++ L+         E    L +EMESL L P++ TY   I     +GR 
Sbjct: 221 VLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRI 280

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA +++  +++ G  P+ VT+ ++I   C  GK+D A ++   M+ +   PD VTY T+
Sbjct: 281 DEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITM 340

Query: 192 ID-----------------------------------ANCKAGNMEEAFRMMDVMGRKGL 216
           +D                                   A CKAGN++EAF ++DVM ++G+
Sbjct: 341 LDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGV 400

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             N  T NT++  L    +LD+A  L N+    G      +Y   I  Y +  ++++AL+
Sbjct: 401 LPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALE 460

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
            +++MK R I P+    NA ++ L++ G+  +A  + N L  +G+ PD  T+N ++  + 
Sbjct: 461 TFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYS 520

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             GQV++A++  + M E   +PDI+  N L++ L + G +++A K F        A   V
Sbjct: 521 KAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVV 580

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK----- 451
           TYNTLI+ L KE +++ A  L + M      P+  T+  I   L ++  ++ A K     
Sbjct: 581 TYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640

Query: 452 -----FTSIMVETGKINHQVVQPNTS-------KTPEEIDPSSISYSEKINEHCSQGRYK 499
                   ++     I+  V++   S       +  + + P  ++    +      G  +
Sbjct: 641 TTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLME 700

Query: 500 DALQIFEE-TRQKGIAINKSTYMNLMNGLIKR 530
           DA +I E+   + G+ +++  + +LM G++ +
Sbjct: 701 DAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQ 732



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/612 (25%), Positives = 280/612 (45%), Gaps = 91/612 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY T+LD     G L  V++  S+M+  G  P+  T+ ILV+  CK G + EA  +
Sbjct: 332 PDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHL 391

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D+M +   LP++ TYN LI+G      L++A  L   ME+L ++P   TY   I+ + +
Sbjct: 392 LDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGK 451

Query: 128 SGRS---MEAFK--------------------------------LIDELDEHGIKPNAVT 152
           SGRS   +E F+                                + + L  +G+ P++VT
Sbjct: 452 SGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVT 511

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N+M+K Y K G++D+A +++ +M EN   PD +  N+LI+   KAG ++EA++M   + 
Sbjct: 512 YNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLK 571

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
              L    +T NT++  L  E ++  A  L  S +  G   + +++ T++    ++++ +
Sbjct: 572 DMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVD 631

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            ALK+  +M     MP   T+N +I GL    +   AI + +++ +  + PD  T  T++
Sbjct: 632 LALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLL 690

Query: 333 HGFCSEGQVEKALQ----FHNKM---VEKSFKPDIVTCNILLSG---------------L 370
            G    G +E A +    F +++   V++ F  D++   +  +G               +
Sbjct: 691 PGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRV 750

Query: 371 CREG-ILEKALK--------------FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           C++G +L   +K              F R     G      +YN LI         E A+
Sbjct: 751 CKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAW 810

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV----ETGKINHQVVQPNT 471
            L +EM+     PD +TY  +  A  +SG++ E  +    M+    +   I H ++  N 
Sbjct: 811 NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870

Query: 472 SKTPE--------------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINK 517
            K+                +  P+  +Y   ++     GR ++A ++FEE    G   N 
Sbjct: 871 VKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNN 930

Query: 518 STYMNLMNGLIK 529
           + Y  L+NG  K
Sbjct: 931 AIYNILINGFGK 942



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 251/521 (48%), Gaps = 23/521 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +L+ L    ++ ++  + + M+ Q +  +  TY I+  G    G L++       M
Sbjct: 126 TCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKM 185

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG-- 129
            +     + ++YN LI+    +G+  EA  + + M    L P + T++ L+     +G  
Sbjct: 186 REAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALM---VATGKR 242

Query: 130 RSMEAFK-LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           R  E  K L++E++  G+KPN  T+ I I+   + G+ID+AC+I++ ME++G  PD VTY
Sbjct: 243 RDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTY 302

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LIDA C AG +++A  +   M     K + +T  T+L        L       +    
Sbjct: 303 TVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA 362

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            GY  D +++  L+    +    + A  L D M+++ ++P+  TYN +I GL +  + + 
Sbjct: 363 DGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDD 422

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+D+ N +   G++P   T+   I  +   G+ +KAL+   KM  +   P+IV CN  L 
Sbjct: 423 ALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLY 482

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            L   G L +A   F      G A DSVTYN ++    K  ++++A  LLS+M E +  P
Sbjct: 483 SLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEP 542

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D     ++   L ++GR++EA K    + +                  ++ P+ ++Y+  
Sbjct: 543 DIIVINSLINTLYKAGRVDEAWKMFCRLKDM-----------------KLAPTVVTYNTL 585

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I     +G+ + A+++F      G   N  T+  +++ L K
Sbjct: 586 IAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCK 626



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 237/562 (42%), Gaps = 90/562 (16%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M G GC P+ +T+NTILD L K  +++    +L  M     +P+  T+N ++ G      
Sbjct: 605  MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE-MESLKLLPDVVTYN 119
            + +A+ +   M +  + PD  T   L+ G    G++E+AF++ ++ +  L +  D   + 
Sbjct: 665  VSDAIWLFHQMKKMLT-PDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723

Query: 120  TLINRFFESGRSMEAFKLIDEL------------------------------------DE 143
             L+        + +     D L                                     E
Sbjct: 724  DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783

Query: 144  HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             G+KP   ++N +I+ +      + A  +   M+  G +PD  TYN L+DA+ K+G + E
Sbjct: 784  LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 204  AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
             F + + M     K NTIT N I+  L     LD                          
Sbjct: 844  LFELYEQMICSSCKPNTITHNIIIANLVKSNSLD-------------------------- 877

Query: 264  GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
                     +AL L+ ++      P+  TY  ++ GL +SG+ E+A ++  E++  G  P
Sbjct: 878  ---------KALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRP 928

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            +   +N +I+GF   G V  A +   +MV +  +PD+ +   L+  LC  G ++ AL +F
Sbjct: 929  NNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYF 988

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
                  G  +DS+ YN +I  L +  R+E+A  L  EM+ + + PD +TY ++   L  +
Sbjct: 989  EKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVA 1048

Query: 444  GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            G +E+A K    +   G                 ++P+  +Y+  I  +   G    A  
Sbjct: 1049 GMVEQAGKLYEELQFIG-----------------LEPNVFTYNALIRGYSMSGNSDSAYA 1091

Query: 504  IFEETRQKGIAINKSTYMNLMN 525
            +++     G + N  T+  L N
Sbjct: 1092 VYKRMMVGGCSPNTGTFAQLPN 1113



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 19/241 (7%)

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP-DETTFNTIIHGFCSEGQVEKA 344
           ++ +T T N M+  L    +    + + N L+Q+ +I  D  T+  I  G    G + + 
Sbjct: 120 VVHTTETCNHMLEILRIHRRVGDMVVVFN-LMQNQIIKRDLNTYLIIFKGLFIRGGLRQT 178

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
                KM E  F  +  + N L+  L + G+  +AL+ +R  +L+G      T++ L+ +
Sbjct: 179 PFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVA 238

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
             K R  E    LL EME   L P+ YTY      L  +GR++EA +    M + G    
Sbjct: 239 TGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDG---- 294

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                          P  ++Y+  I+  C+ G+  DA+++F + +      ++ TY+ ++
Sbjct: 295 -------------CGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML 341

Query: 525 N 525
           +
Sbjct: 342 D 342


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 256/507 (50%), Gaps = 28/507 (5%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL---PDVWT 82
           L E   LLS +     V +  +YN +++  C+ G L  A+ ++ +M+    L   P+  +
Sbjct: 40  LPESPALLSALPS---VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAIS 96

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y  L+   C      +A  L + M+   + PDVVTY TLI    ++     A +L++E+ 
Sbjct: 97  YTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           E GI+PN V ++ ++  YCK G+ +   K+   M   G  PD V Y  LID+ C+ G ++
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVK 216

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A R+MD+M  +GL+ N +T N +++++C E  + EA  L  + S++G   D V+Y TLI
Sbjct: 217 KAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLI 276

Query: 263 TGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           TG     + + A+ L +EM   E ++ P   T+N++I GL + G   QA+ +   + ++G
Sbjct: 277 TGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
              +   FN +I G     +V+KA++  ++M     +PD  T +IL++G C+   +E+A 
Sbjct: 337 CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE 396

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KLGPDRYTYAAIHTA 439
            +      +G   + V Y  L+ ++C +  +  A  L +EM+   KL    Y+   IH A
Sbjct: 397 SYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYS-TMIHGA 455

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             +SG  + A++F   M++ G I                 P +++YS  IN     G   
Sbjct: 456 F-KSGEKKIAEEFLKDMIDEGLI-----------------PDAVTYSIPINMFAKSGDLA 497

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNG 526
            A ++ ++    G   + + + +L+ G
Sbjct: 498 AAERVLKQMTASGFVPDVAVFDSLIQG 524



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 231/451 (51%), Gaps = 3/451 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ ++Y T++ AL    +  +   LL  M+  G+ P+  TY  L+ G C    +  A+ +
Sbjct: 92  PNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVEL 151

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M ++   P+V  Y+ L++G+C  G  E   ++ +EM    + PDVV Y  LI+    
Sbjct: 152 LNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCR 211

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A +++D + E G++PN VT+N++I   CKEG + +A  + +NM E G  PD VT
Sbjct: 212 HGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVT 271

Query: 188 YNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           YNTLI        M+EA  +++ M  G   ++ + +T N+++H LC    + +A  +   
Sbjct: 272 YNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAM 331

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++ G   + V++  LI G  R  K  +A++L DEM    + P +FTY+ +I G  +  +
Sbjct: 332 MAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQ 391

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E+A   L+E+   GM P+   +  ++   C +G + +A    N+M +++ K D    + 
Sbjct: 392 VERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYST 450

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ G  + G  + A +F +  I +G   D+VTY+  I+   K   L  A  +L +M    
Sbjct: 451 MIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASG 510

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
             PD   + ++       G  E+  + T  M
Sbjct: 511 FVPDVAVFDSLIQGYGAKGDTEKILELTREM 541



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 264/526 (50%), Gaps = 27/526 (5%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV---PNRTTYNILVSGYCKLGWLKEAM 65
           D V+YNT+L AL ++G L+    LL  M  +  +   PN  +Y  L+   C      +A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  M      PDV TY  LI G C+A  ++ A  L  EM    + P+VV Y+ L++ +
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++GR     K+ +E+   GI+P+ V +  +I   C+ GK+ KA +++  M E G  P+ 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN LI++ CK G++ EA  +   M  KG++ + +T NT++  L    ++DEA  LL  
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 246 ASKRGYYL--DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             +    +  D +++ ++I G  +     +AL++   M E     +   +N +I GL + 
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K ++A+++++E+  SG+ PD  T++ +I+GFC   QVE+A  + ++M  +  +P+ V  
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK--ERRLEDAFGLLSEM 421
             LL  +C +G++ +A   F       K +D+  Y+T+I    K  E+++ + F  L +M
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNEMDRNCK-LDAAAYSTMIHGAFKSGEKKIAEEF--LKDM 471

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++ L PD  TY+       +SG L  A++    M  +G +                 P 
Sbjct: 472 IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFV-----------------PD 514

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              +   I  + ++G  +  L++  E   K +A++      ++  L
Sbjct: 515 VAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 218/454 (48%), Gaps = 6/454 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTY T++  L     ++   +LL++M + G+ PN   Y+ L+ GYCK G 
Sbjct: 120 MQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGR 179

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +   +V + M+     PDV  Y  LI+  C  G +++A R+   M    L P+VVTYN 
Sbjct: 180 WESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNV 239

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--EE 178
           LIN   + G   EA  L   + E G++P+ VT+N +I       ++D+A  ++  M   E
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD +T+N++I   CK G M +A ++  +M   G + N +  N ++  L    K+ +
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKK 359

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L++  +  G   D  +Y  LI G+ +  +  RA     EM+ + + P    Y  ++ 
Sbjct: 360 AMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLK 419

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            +   G   QA D+ NE+ ++  + D   ++T+IHG    G+ + A +F   M+++   P
Sbjct: 420 AMCDQGMMGQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIP 478

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D VT +I ++   + G L  A +  +     G   D   +++LI     +   E    L 
Sbjct: 479 DAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELT 538

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            EM  K +  D    + I T+L   G   E QK 
Sbjct: 539 REMTAKDVALDPKIISTIVTSL---GASIEGQKL 569



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 181/355 (50%), Gaps = 24/355 (6%)

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMG---RKGLKMNTITLNTILHTLCCEKKLDEAY 240
           D V+YNT++ A C+ G ++ A  ++ VM    R   + N I+  T++  LC +++  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL S    G   D V+YGTLI G       + A++L +EM E  I P+   Y+ ++ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ E    +  E+   G+ PD   +  +I   C  G+V+KA +  + M E+  +P++
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L++ +C+EG + +AL   ++   KG   D VTYNTLI+ L     +++A  LL E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 421 M--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPEE 477
           M   E ++ PD  T+ ++   L + G + +A +  ++M E G + N              
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNL------------- 341

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                ++++  I       + K A+++ +E    G+  +  TY  L+NG  K R+
Sbjct: 342 -----VAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQ 391



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 177/346 (51%), Gaps = 7/346 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTYN +++++ K+G + E  DL  +M ++G+ P+  TYN L++G   +  + EA
Sbjct: 229 GLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEA 288

Query: 65  MRVVDLMTQNKSL--PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           M +++ M Q ++   PD+ T+N +I+G C  G + +A ++R  M       ++V +N LI
Sbjct: 289 MALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                  +  +A +L+DE+   G++P++ T++I+I  +CK  ++++A   +  M   G  
Sbjct: 349 GGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGME 408

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL--CCEKKLDEAY 240
           P+ V Y  L+ A C  G M +A  + + M R   K++    +T++H      EKK+ E +
Sbjct: 409 PEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEF 467

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L      G   D V+Y   I  + +      A ++  +M     +P    ++++I G 
Sbjct: 468 --LKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY 525

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
              G TE+ +++  E+    +  D    +TI+    +  + +K LQ
Sbjct: 526 GAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQ 571


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 254/531 (47%), Gaps = 20/531 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++    + G+L+     +  +   GL  +   ++ L+ G C      +AM +
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLP-DVVTYNTLINR 124
           V   M +    PD+++Y +L+ G C+    ++A  L   M   K   P DVV Y T+IN 
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G+  +A+ L D + + G  P+ VT++ +I    K   +DKA ++   M +NG  PD
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C+ Y +L+   C +G  +EA  +   M R G++ + +T   ++  LC   K  EA  + +
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 336

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  KRG+  D  +YGTL+ GY  +        L D M ++ +      +N ++   ++  
Sbjct: 337 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 396

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++A+ + + + Q G+ PD   + T++   C+ G+V+ AL   N +  +   P+IV   
Sbjct: 397 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 456

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GLC     +K  +     I +G  +D++ +N ++ +LCK+ R+ +A  L   M   
Sbjct: 457 TLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRI 516

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P+  TY  +       G+++EA K   +MV  G                 + PS ++
Sbjct: 517 GIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG-----------------VKPSDVT 559

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           Y+  IN +   GR +D L +  E   KG+     TY  L+ GL +  ++++
Sbjct: 560 YNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVA 610



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 230/460 (50%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLVP-NRTTYNILVSGYCKL 58
           M   GC PD  +Y  +L  L       +  DLL  M   +G  P +   Y  +++G  + 
Sbjct: 161 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 220

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L +A  + D M      PDV TY+ +I+       +++A ++   M    ++PD + Y
Sbjct: 221 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 280

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            +L++ +  SG+  EA  +  ++  HG++P+ VT+  ++ + CK GK  +A KI  ++ +
Sbjct: 281 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD  TY TL+      G + E   ++D+M +KG+++     N I+       K+DE
Sbjct: 341 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 400

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++ ++  ++G   D V+YGT++       + + AL  ++ +K   + P+   +  +I 
Sbjct: 401 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL    K ++  ++  E++  G+  D   FN I+   C +G+V +A    + MV    +P
Sbjct: 461 GLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEP 520

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +  T N L+ G C +G +++A+K     +  G     VTYNT+I+   +  R+ED   LL
Sbjct: 521 NTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLL 580

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            EM+ K + P   TY  +   L ++GR   A++    M++
Sbjct: 581 REMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 175/384 (45%), Gaps = 55/384 (14%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC---------- 231
           +P+  TY  +I    + G ++ AF  +  +   GL+M+ I  + +L  LC          
Sbjct: 96  APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMD 155

Query: 232 ----------CEKKLDEAYMLLNS-----------------ASKRGYY-LDEVSYGTLIT 263
                     C+  L    +LL                   A  +G   LD V+Y T+I 
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 215

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           G  R+ + ++A  L+D M +R   P   TY+++I  LS++   ++A  +   ++++G++P
Sbjct: 216 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 275

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           D   + +++HG+CS G+ ++A+    KM     +PD+VT   L+  LC+ G   +A K F
Sbjct: 276 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 335

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            S + +G   DS TY TL+     E  L +   LL  M +K +    + +  I  A  + 
Sbjct: 336 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 395

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            +++EA    S M + G                 ++P  ++Y   ++  C+ GR  DAL 
Sbjct: 396 NKVDEALLVFSNMRQQG-----------------LNPDIVNYGTVLDILCTAGRVDDALS 438

Query: 504 IFEETRQKGIAINKSTYMNLMNGL 527
            F   + +G+A N   +  L++GL
Sbjct: 439 QFNSLKSEGLAPNIVVFTTLIHGL 462


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 250/533 (46%), Gaps = 19/533 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E FGC P   +YNT+L+A  +  +  +V  L +  +  G+ PN  TYN+L+   CK    
Sbjct: 106 EIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF 165

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           ++A   ++ M +    PDV++Y+ +IN     G L++A  L  EM   ++ PDV  YN L
Sbjct: 166 EKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNIL 225

Query: 122 INRFFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I+ F +      A +L D+ L++  + PN  THNIMI    K G++D   KI   M++N 
Sbjct: 226 IDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNE 285

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D  TY++LI   C  GN+++A  + + +  +   ++ +T NT+L   C   K+ E+ 
Sbjct: 286 REKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESL 345

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     +R   ++ VSY  LI G   + K + A  +W  M  +       TY   I GL
Sbjct: 346 ELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G   +A+ ++ E+   G   D   + +II   C + ++E+A     +M +   + + 
Sbjct: 405 CVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNS 464

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
             CN L+ GL R+  L  A    R     G     V+YN LI  LC+  +  +A   + E
Sbjct: 465 HVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKE 524

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M E  L PD  TY+ +   L    ++E A +            HQ +Q         ++P
Sbjct: 525 MLENGLKPDLKTYSILLGGLCRDRKIELALELW----------HQFLQSG-------LEP 567

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             + ++  I+  CS G+  DA+ +      +    N  TY  LM G  K R S
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDS 620



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 245/487 (50%), Gaps = 39/487 (8%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGY------ 55
           EGF   PD  +Y+T+++ L K GKL++  +L  +M ++ + P+ T YNIL+ G+      
Sbjct: 178 EGFK--PDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDH 235

Query: 56  ------------------------------CKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                          K G + + +++ D M QN+   D++TY+ 
Sbjct: 236 KMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSS 295

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI+G C+ G +++A  +  E+   K   DVVTYNT++  F   G+  E+ +L   +++  
Sbjct: 296 LIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN 355

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
              N V++NI+IK   + GKID+A  I R M   G++ D  TY   I   C  G + +A 
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKAL 414

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +M  +  KG  ++     +I+  LC +++L+EA  L+   SK G  L+      LI G 
Sbjct: 415 GVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            RD + + A  L   M +   +P+  +YN +I GL ++GK  +A   + E+L++G+ PD 
Sbjct: 475 IRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDL 534

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T++ ++ G C + ++E AL+  ++ ++   +PD++  NIL+ GLC  G L+ A+    +
Sbjct: 535 KTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              +    + VTYNTL+    K R    A  +   M +  L PD  +Y  I   L    R
Sbjct: 595 MEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHR 654

Query: 446 LEEAQKF 452
           +  A +F
Sbjct: 655 VSYAIEF 661



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 211/506 (41%), Gaps = 89/506 (17%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           V Y+ ++ R  E+       ++++ +     K +      +IK Y K    D+A  + + 
Sbjct: 44  VVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKR 103

Query: 176 MEE-NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           M E  G  P   +YNTL++A  +A    +   +       G+  N  T N ++   C +K
Sbjct: 104 MREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF--- 291
           + ++A   LN   K G+  D  SY T+I    +  K + AL+L+DEM ER++ P      
Sbjct: 164 EFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYN 223

Query: 292 ---------------------------------TYNAMIWGLSQSGKTEQAIDMLNELLQ 318
                                            T+N MI GLS+ G+ +  + + + + Q
Sbjct: 224 ILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQ 283

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +    D  T++++IHG C EG V+KA    N++VE+    D+VT N +L G CR G +++
Sbjct: 284 NEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKE 343

Query: 379 ALKFFR-------------------------------SWIL---KGKAVDSVTYNTLISS 404
           +L+ +R                                W L   KG A D+ TY   I  
Sbjct: 344 SLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHG 403

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KIN 463
           LC    +  A G++ E+E K    D Y YA+I   L +  RLEEA      M + G ++N
Sbjct: 404 LCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELN 463

Query: 464 HQVVQPNTSKTPEEID-----------------PSSISYSEKINEHCSQGRYKDALQIFE 506
             V          +                   P+ +SY+  I   C  G++ +A    +
Sbjct: 464 SHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVK 523

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
           E  + G+  +  TY  L+ GL + RK
Sbjct: 524 EMLENGLKPDLKTYSILLGGLCRDRK 549



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G   D   Y +I+D L KK +L E  +L+ +M K G+  N    N L+ G  +   
Sbjct: 420 VESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  ++  M +N  LP V +YN+LI G C AG   EA    KEM    L PD+ TY+ 
Sbjct: 480 LSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSI 539

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN- 179
           L+       +   A +L  +  + G++P+ + HNI+I   C  GK+D A  ++ NME   
Sbjct: 540 LLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599

Query: 180 ----------------------------------GFSPDCVTYNTLIDANCKAGNMEEAF 205
                                             G  PD ++YNT++   C    +  A 
Sbjct: 600 CTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAI 659

Query: 206 RMMDVMGRKGLKMNTITLNTILHTL 230
              D     G+     T N ++  +
Sbjct: 660 EFFDDARNHGIFPTVYTWNILVRAV 684



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 45/95 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME   C  + VTYNT+++  FK    N    +   M K GL P+  +YN ++ G C    
Sbjct: 595 MEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHR 654

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           +  A+   D    +   P V+T+N+L+    N  M
Sbjct: 655 VSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRKM 689


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 258/555 (46%), Gaps = 55/555 (9%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y+  +  + K+G + + + L   M   GL+P    Y  L+ GYC+   +++   ++  M 
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +   +   +TY  ++ G C++G L+ A+ + KEM +    P+VV Y TLI  F ++ R  
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A +++ E+ E GI P+   +N +I    K  ++D+A   +  M ENG  P+  TY   I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
               +A     A + +  M   G+  N +    +++  C + K+ EA     S   +G  
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  +Y  L+ G F+++K + A +++ EM+ + I P  F+Y  +I G S+ G  ++A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            +E+++ G+ P+   +N ++ GFC  G++EKA +  ++M  K   P+ VT   ++ G C+
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL-------------- 418
            G L +A + F    LKG   DS  Y TL+   C+   +E A  +               
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769

Query: 419 ------------SEMEEKKLG------------PDRYTYAAIHTALVESGRLEEAQKFTS 454
                       +E++ + L             P+  TY  +   L + G LE A+    
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK---- 825

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                 ++ HQ+   N       + P+ I+Y+  +N +   GR  +   +F+E    GI 
Sbjct: 826 ------ELFHQMQNAN-------LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 515 INKSTYMNLMNGLIK 529
            +   Y  ++N  +K
Sbjct: 873 PDHIMYSVIINAFLK 887



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/564 (25%), Positives = 277/564 (49%), Gaps = 41/564 (7%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G   +P       +LDAL +  +L+   D+   M ++ +V +  TY++L+  +C+ G ++
Sbjct: 179 GLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ 238

Query: 63  ---------------------EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR 101
                                 A+++ + M     +P  +TY++LI+G C    LE+A  
Sbjct: 239 LGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKS 298

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWY 160
           L  EM+SL +  D  TY+ LI+   + GR+ +A K L+ E+  HGI      ++  I   
Sbjct: 299 LLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
            KEG ++KA  +   M  +G  P    Y +LI+  C+  N+ + + ++  M ++ + ++ 
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T  T++  +C    LD AY ++      G   + V Y TLI  + ++ +   A+++  E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           MKE+ I P  F YN++I GLS++ + ++A   L E++++G+ P+  T+   I G+    +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
              A ++  +M E    P+ V C  L++  C++G + +A   +RS + +G   D+ TY  
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L++ L K  +++DA  +  EM  K + PD ++Y  +     + G +++A      MVE G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 461 KINHQVV----------QPNTSKTPEEID--------PSSISYSEKINEHCSQGRYKDAL 502
              + ++               K  E +D        P++++Y   I+ +C  G   +A 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 503 QIFEETRQKGIAINKSTYMNLMNG 526
           ++F+E + KG+  +   Y  L++G
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDG 741



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 235/494 (47%), Gaps = 16/494 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   YN+++  L K  +++E R  L +M + GL PN  TY   +SGY +      A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            + V  M +   LP+      LIN +C  G + EA    + M    +L D  TY  L+N 
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++ +  +A ++  E+   GI P+  ++ ++I  + K G + KA  I   M E G +P+
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YN L+   C++G +E+A  ++D M  KGL  N +T  TI+   C    L EA+ L +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   D   Y TL+ G  R     RA+ ++   K +    ST  +NA+I  + + G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFG 780

Query: 305 KTEQAIDMLNELLQSGM----IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           KTE   ++LN L+         P++ T+N +I   C EG +E A +  ++M   +  P +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   LL+G  + G   +    F   I  G   D + Y+ +I++  KE     A  L+ +
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 421 MEEKKLGPDR-----YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
           M  K    D       T  A+ +   + G +E A+K    MV    I      P+++   
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI------PDSATVI 954

Query: 476 EEIDPSSISYSEKI 489
           E I+ S IS ++++
Sbjct: 955 ELINESCISSNQRV 968



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 259/566 (45%), Gaps = 31/566 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   DN TY+ ++D L K    +  + L+ +M   G+      Y+  +    K G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  + D M  +  +P    Y  LI G+C    + + + L  EM+   ++    TY T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     SG    A+ ++ E+   G +PN V +  +IK + +  +   A ++++ M+E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD   YN+LI    KA  M+EA   +  M   GLK N  T    +       +   A 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    + G   ++V    LI  Y +  K   A   +  M ++ I+    TY  ++ GL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ K + A ++  E+   G+ PD  ++  +I+GF   G ++KA    ++MVE+   P++
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  N+LL G CR G +EKA +      +KG   ++VTY T+I   CK   L +AF L  E
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 421 MEEKKLGPDRYTYAAIHTALVES-GRLEEAQKFTSIM--------VETGKIN---HQVVQ 468
           M+ K L PD + Y    T LV+   RL + ++  +I           T   N   + V +
Sbjct: 723 MKLKGLVPDSFVY----TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778

Query: 469 PNTSKTPEEI-------------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
              ++   E+              P+ ++Y+  I+  C +G  + A ++F + +   +  
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838

Query: 516 NKSTYMNLMNGLIK--RRKSISKAVD 539
              TY +L+NG  K  RR  +    D
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFD 864



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/282 (19%), Positives = 99/282 (35%), Gaps = 74/282 (26%)

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR------- 372
           G   D   F  +  G+ ++  +E+A+   +  +     P +  C +LL  L R       
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 373 ----EGILEK---------------------------------------------ALKFF 383
               +G++E+                                             ALK  
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
            S I KG      TY+ LI  LCK +RLEDA  LL EM+   +  D +TY+ +   L++ 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 444 GRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEEIDPSSISY 485
              + A+     MV  G                   +  +            + P + +Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +  I  +C +   +   ++  E +++ I I+  TY  ++ G+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 27/232 (11%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFK-----PDIVTCNILLSGLCREGILEKALK 381
           +F+ +    C+ G  EKAL    +M+E+++        IV C+    G   +G+L   L 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGIL- 157

Query: 382 FFRSWILKGKAVDSVTY----------------NTLISSLCKERRLEDAFGLLSEMEEKK 425
            F  +I K    ++V                    L+ +L +  RL+  + +   M E+ 
Sbjct: 158 -FDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKF---TSIMVETGKIN-HQVVQPNTSKTPEEIDPS 481
           +  D  TY  +  A   +G ++  +     T     T  +N    ++   S   + + P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             +Y   I+  C   R +DA  +  E    G++++  TY  L++GL+K R +
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 231/461 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  +YN ++  +++ G+  +  ++  +M ++ ++PN  TYN ++ G+ K G L+    +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M  +   P+  TYN+L++G C AG + E   L  EM S K++PD  TY+ L +    
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G S     L  +  ++G+     T +I++   CK+GK+  A ++++++   G  P  V 
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+  C+ G +E AF     M  + +K + IT N +++ LC  +++  A  LL    
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G      ++ TLI  Y R  +  +   +  EM+E  + P+  +Y +++    ++GK  
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L+++    ++P+   +N II  +   G  ++A     KM      P IVT N+L+
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC +  + +A +   S        D+V+YNTLIS+ C    ++ A  L   M +  + 
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
               TY  + + L  +GRL E +     M++   +    + 
Sbjct: 614 STVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIH 654



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 254/527 (48%), Gaps = 18/527 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E    LP   + N +L+AL   G+  +VR     +   G  P+   +N  V      G L
Sbjct: 117 EARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDL 176

Query: 62  KEAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            EA+ ++  M ++ + P + ++YN++I G   AG   +A  +  EM    +LP+ +TYNT
Sbjct: 177 GEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNT 236

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G     F L D++  HG+KPNA+T+N+++   C+ G++ +   ++  M    
Sbjct: 237 MIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 296

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY+ L D   + G+ +    +     + G+ +   T + +L+ LC + K+  A 
Sbjct: 297 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAE 356

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L S    G     V Y TLI GY +  +   A   + +MK R I P   TYNA+I GL
Sbjct: 357 EVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ +   A D+L E+  +G+ P   TFNT+I  +   GQ+EK     ++M E   KP++
Sbjct: 417 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 476

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V+   +++  C+ G + +A+        K    ++  YN +I +  +    + AF L+ +
Sbjct: 477 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 536

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+   + P   TY  +   L    ++ EA++  + +      NH+++            P
Sbjct: 537 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLS-----NHRLI------------P 579

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++SY+  I+  C +G    AL + +   + GI     TY  L++GL
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 626



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 217/454 (47%), Gaps = 35/454 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP+++TYNT++D   K G L     L   M   GL PN  TYN+L+SG C+ G + E   
Sbjct: 228 LPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 287

Query: 67  VVDLMTQNKSLPDVWTYNML-----------------------------------INGWC 91
           ++D M   K +PD +TY++L                                   +NG C
Sbjct: 288 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLC 347

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
             G +  A  + + + +  L+P  V YNTLIN + ++G    AF    ++    IKP+ +
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 407

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T+N +I   CK  +I  A  ++  M++NG +P   T+NTLIDA  + G +E+ F ++  M
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
              GLK N ++  +I++  C   K+ EA  +L+    +    +   Y  +I  Y      
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 527

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           ++A  L ++MK   I PS  TYN +I GL    +  +A +++N L    +IPD  ++NT+
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 587

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C  G ++KAL    +M +   K  + T + L+SGL   G L +    ++  +    
Sbjct: 588 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNV 647

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
              +  +N ++ +  K      A  L  EM +K+
Sbjct: 648 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 235/497 (47%), Gaps = 22/497 (4%)

Query: 64  AMRVV-DLMTQNKS-LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           A+R++ DL  + ++ LP + + N+L+    + G   +  R    + S    PD   +N  
Sbjct: 107 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 166

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKP-NAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +     +G   EA  ++  +   G  P NA ++N++I    + G+   A ++   M E  
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYNT+ID + K G++E  F + D M   GLK N IT N +L  LC   ++ E  
Sbjct: 227 VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 286

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+  + +    D  +Y  L  G  R+  +   L L+ +  +  +    +T + ++ GL
Sbjct: 287 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGL 346

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK   A ++L  L+ +G++P    +NT+I+G+C  G++E A     +M  +  KPD 
Sbjct: 347 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 406

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L++GLC+   +  A          G      T+NTLI +  +  +LE  F +LSE
Sbjct: 407 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 466

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA-----QKFTSIMVETGKINHQVVQPNTSKTP 475
           M+E  L P+  +Y +I  A  ++G++ EA       F   ++   ++ + ++       P
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 526

Query: 476 EE-------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
            +             I PS ++Y+  I   C+Q +  +A +I        +  +  +Y  
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 586

Query: 523 LMNGLIKRRKSISKAVD 539
           L++     R +I KA+D
Sbjct: 587 LISACC-YRGNIDKALD 602



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 127/233 (54%), Gaps = 5/233 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   T+NT++DA  + G+L +   +LS+M++ GL PN  +Y  +V+ +CK G 
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ ++D M     LP+   YN +I+ +   G  ++AF L ++M+S  + P +VTYN 
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 551

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       +  EA ++I+ L  H + P+AV++N +I   C  G IDKA  + + M + G
Sbjct: 552 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
                 TY+ LI     AG + E    M+ + +K ++ N +  N I H +  E
Sbjct: 612 IKSTVRTYHQLISGLGGAGRLIE----MEYLYQKMMQNNVVPSNAI-HNIMVE 659



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V+Y +I++A  K GK+ E   +L DM  + ++PN   YN ++  Y + G 
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 526

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +V+ M  N   P + TYN+LI G CN   + EA  +   + + +L+PD V+YNT
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 586

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A  L   + ++GIK    T++ +I      G++ +   + + M +N 
Sbjct: 587 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNN 646

Query: 181 FSPDCVTYNTLIDANCKAGN 200
             P    +N +++A  K GN
Sbjct: 647 VVPSNAIHNIMVEAYSKYGN 666



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 72/141 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P  VTYN ++  L  + +++E  ++++ +    L+P+  +YN L+S  C  G 
Sbjct: 537 MKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 596

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M +      V TY+ LI+G   AG L E   L ++M    ++P    +N 
Sbjct: 597 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNI 656

Query: 121 LINRFFESGRSMEAFKLIDEL 141
           ++  + + G  ++A  L  E+
Sbjct: 657 MVEAYSKYGNEIKAEDLRKEM 677


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 246/527 (46%), Gaps = 18/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY  ++ AL K+G + +   L   M+ +G+      YN L++GYCK G 
Sbjct: 387 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 446

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  ++  M +    P   +Y+ LI G C  G L     L +EM    +  +  T+  
Sbjct: 447 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 506

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +  EA +L D++ +  + PN VT N+MI+ YC  G I KA ++   M E G
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 566

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY +LI   C    + +A   +  +      +N  +L  +L+    E +  E Y
Sbjct: 567 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 626

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + RG  LD VS+  ++    +     ++  L+ EMKE+ + P    Y  MI  L
Sbjct: 627 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 686

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+     QA++  ++++  G  P+  T   +I+  C  G +  A     +M+  +  P+ 
Sbjct: 687 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 746

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N  L     EG +EKA K   S +L+G     V++N LI  LCK  ++++A  L+S+
Sbjct: 747 FTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSK 805

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           + E    PD  +Y+ I   L + G + +A +  + M+  G                 + P
Sbjct: 806 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG-----------------LKP 848

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++Y+  I      G    AL I+    + G+  N  TY  L++G+
Sbjct: 849 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 248/547 (45%), Gaps = 52/547 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y   + A  +   L+  R L+  M+ +G+  +   YN+L+ G CK   ++EA+ V 
Sbjct: 220 DEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVK 279

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           ++M       D  TY  L+ G+C    LE A R+  +M  L  +P     + +I+   + 
Sbjct: 280 NVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK 339

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
               EAF L  +L + G+ PN   +N +I   CK  + D A ++ + M   G  P+ VTY
Sbjct: 340 ELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 399

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LI A CK G +E+A  + D M  KG+K+     N++++  C +  LD A  LL+   K
Sbjct: 400 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 459

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G      SY  LI G  R+   +  ++L  EM ER I  + +T+ A+I G  +  K ++
Sbjct: 460 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 519

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  + ++++ S +IP+E TFN +I G+C  G + KA Q +++MVE   KPD  T   L+S
Sbjct: 520 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 579

Query: 369 GLC-----------------------------------REGILEKALKFFRSWILKGKAV 393
           GLC                                   REG   +    +    ++G  +
Sbjct: 580 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 639

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V++  ++ +  K+   E +  L  EM+E+ + PD   Y  +  AL +   + +A    
Sbjct: 640 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 699

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             MV  G                   P++++++  IN  C  G    A  + +E     +
Sbjct: 700 DQMVVDG-----------------YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV 742

Query: 514 AINKSTY 520
             NK TY
Sbjct: 743 LPNKFTY 749



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 185/401 (46%), Gaps = 18/401 (4%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           GI  N  T + ++    K  +   A  +   M ++G   D   Y   I A C++ N++ A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M  +G+K + +  N +++ LC   ++ EA  + N     G   DEV+Y TL+ G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + R E+   AL++  +M     +PS    + MI  L +    E+A  +  +L   GM+P+
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +N +I   C   + + A +   +M  +  +P+ VT  IL+  LC+ G++E AL  F 
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               KG  V    YN+LI+  CK+  L+ A GLLS M ++ L P   +Y+ +   L  +G
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 445 RLEEAQKFTSIMVE----------TGKINHQVVQPNTSKTPEEID--------PSSISYS 486
            L    +    M E          T  IN         +     D        P+ ++++
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 540

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I  +C  G  + A Q++++  + G+  +  TY +L++GL
Sbjct: 541 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+ +N  T + IL +L   ++   A  L +   + G +LDE  Y   I  Y      + A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             L   M+   +  S   YN +++GL ++ + ++A+++ N ++  G+  DE T+ T+++G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC   ++E AL+  + M+   F P    C+ ++  L ++ ++E+A          G   +
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
              YN LI  LCK  R +DA  L  EM  + L P+  TYA +  AL + G +E+A     
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 455 IMVETG----------KINHQVVQPNTSK--------TPEEIDPSSISYSEKINEHCSQG 496
            M + G           IN    Q +  +          E + P++ SYS  I   C  G
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                +++  E  ++GIA N  T+  L+NG  K +K
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 516



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 152/344 (44%), Gaps = 34/344 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PDN TY +++  L     +++  + ++D++    V N  +   L+ G+ + G 
Sbjct: 562 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 621

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E   + D M       D+ ++ +++         E++  L +EM+   + PD + Y  
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 681

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA---CK--IVRN 175
           +I+   +    ++A    D++   G  PN VTH ++I   CK G +  A   CK  +  N
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741

Query: 176 MEENGFSPDC-----------------------------VTYNTLIDANCKAGNMEEAFR 206
           +  N F+ +C                             V++N LI   CKAG ++EA  
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAID 801

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           +M  +   G   + I+ +TI+H LC    +++A+ L N    +G   D V+Y   I    
Sbjct: 802 LMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCN 861

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              ++++AL ++  M    + P+  TY A++ G+S      QA+
Sbjct: 862 VHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQAL 905


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 257/535 (48%), Gaps = 29/535 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCL    TY  +L  L   G + E   +   M+     P+   Y  +V G C+ G  +EA
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++    N   P++  YN LI+G+CNAG +E A ++ + M+  +  P+V TY  LI+ 
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG 256

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SG+   A  L   + E G++PN VT+  +I+  C EG +  A +++  ME NG  P+
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T++ LIDA CK   +EEA   +  + +KG+K+N +   +++  LC   K+D A  L+ 
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+  D  SY +LI G  R +K ++A  + ++M E+ I  S  TY  +I  L +  
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            +E    + ++++ +G+ PD  T+   +  +C EG++E A     +MV++   P++VT N
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR------------LE 412
            L+ G    G++ +A   F   + KG   +  +Y  L+  + K+              ++
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           D   LL ++ E++L      Y+     L    RLEEA+ F   M             N +
Sbjct: 557 DLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGM------------QNAN 604

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            TP E       Y+  I+  C      DAL + +   + G   +  +Y  +++ L
Sbjct: 605 LTPSE-----DVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSL 654



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 222/449 (49%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY T+++A    G +   +  L+ +   GL P+   Y   V GYC+ G L  A RV  LM
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                L   +TY  L++G   AGM+ EA  +   M +    PD   Y T+++   E+GR+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L++E   +G +PN V +N +I  YC  G+++ A K+   M+ N  SP+  TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CK+G +E A  +   M   GL+ N +T   ++   C E  L  A+ LL+     G 
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             ++ ++  LI    + EK   A      + ++ +  +   Y ++I GL ++GK + A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ +++  G +PD  +++++I G C + ++ +A      M+EK  +   VT  I++  L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           RE   E   K F   I  G   D VTY   + S C+E R+EDA  ++ +M ++ + P+  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +       G + +A     +MV  G
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKG 522



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 236/527 (44%), Gaps = 21/527 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP     NT+L AL +     ++  L S M  +    N  TY  L++ YC  G +  A +
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  +      PD + Y   + G+C AGML  A R+   M     L    TY  L++   
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +G   EA  +   +      P+   +  M+   C+ G+ ++A  ++     NGF P+ V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LID  C AG ME A ++ + M       N  T   ++H LC   K++ A +L +  
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   + V+Y  LI G   +     A +L   M+   ++P+ +T++ +I  L +  K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A   L  L++ G+  +E  + ++I G C  G+++ A +   KM+ + F PD  + + L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLCR+  L +A       + KG     VTY  +I  L +E   E    +  +M    +
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY     +  E GR+E+A+     MV+ G                 + P+ ++Y+
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG-----------------VFPNLVTYN 496

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             I  + + G    A   FE    KG   N+ +Y  L+  ++K+  S
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 208/500 (41%), Gaps = 47/500 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V YN ++D     G++     +   M      PN  TY  L+ G CK G ++ AM +
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +    P+V TY  LI G CN G L+ AFRL   ME+  L+P+  T++ LI+   +
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             +  EA   +  L + G+K N V +  +I   CK GKID A ++++ M   GF PD  +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++LID  C+   + +A  M++ M  KG++ + +T   I+  L  E   +    + +   
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D V+Y   +  Y  + +   A  +  +M +R + P+  TYN +I G +  G   
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509

Query: 308 QAIDMLNELLQSGMIPDETTFNTI------------------------------------ 331
           QA      ++  G  P+E ++  +                                    
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQ 569

Query: 332 -----------IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
                      I   C   ++E+A  F   M   +  P       ++   CR  IL  AL
Sbjct: 570 LPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDAL 629

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
               S    G      +Y  +ISSLC+      A  +  ++  K+   D   +  +   L
Sbjct: 630 TLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGL 689

Query: 441 VESGRLEEAQKFTSIMVETG 460
           ++ G + E     S+M E G
Sbjct: 690 LQKGSVAEFSSLLSVMKEHG 709



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 218/498 (43%), Gaps = 47/498 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G  C P+  TY  ++  L K GK+     L S M + GL PN  TY  L+ G C  G 
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297

Query: 61  LKEAMRVVDLMTQNKSLPDVWT-----------------------------------YNM 85
           L+ A R++ LM  N  +P+ WT                                   Y  
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI+G C  G ++ A  L ++M S   +PD  +Y++LI+      +  +A  +++++ E G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I+ + VT+ I+I    +E   +   KI   M   G +PD VTY   + + C+ G ME+A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            M+  M  +G+  N +T NT++        + +A+        +G+  +E SY  L+   
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLV 537

Query: 266 FRDEKANRALKLW------------DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
            +   ++ ++ +W            +++ ERQ+  +   Y+  I  L +  + E+A    
Sbjct: 538 VKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFF 597

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
             +  + + P E  + +II   C    +  AL   + M +  + P + +  I++S LC  
Sbjct: 598 MGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEG 657

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G    A + F   +LK    D + +  LI  L ++  + +   LLS M+E    P     
Sbjct: 658 GNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTIN 717

Query: 434 AAIHTALVESGRLEEAQK 451
           A I   +  +  ++E  +
Sbjct: 718 AMITGEITVTNEVQEIAR 735


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 235/457 (51%), Gaps = 3/457 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +  +L+ + K  K + V +L   ++  G+  +  T N+L++ +C+      A  
Sbjct: 68  LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASS 127

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  + +    PD++T+  LING+C    +EEA  +  +M  + + PDVV Y T+I+   
Sbjct: 128 FLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLC 187

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++G    A  L ++++ +GI+P+ V +  ++   C  G+   A  ++R M +    PD +
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+N LIDA  K G + +A  + + M +  +  N  T  ++++ LC E +LDEA  +    
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + D V+Y +LI G+ + +K   A+K++ EM ++ +  +T TY  +I G    GK 
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK---SFKPDIVTC 363
             A ++   ++  G+ P+  T+N ++H  C  G+V KAL     M ++      P+I T 
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTY 427

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+LL GLC  G LEKAL  F     +   +  +TY  +I  +CK  +++DA  L   +  
Sbjct: 428 NVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPS 487

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           K + P+  TY  + + L   G + EA      M E G
Sbjct: 488 KGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 231/472 (48%), Gaps = 20/472 (4%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +   M +++ LP +  +  L+N        +    L K ++ + +  D+ T N 
Sbjct: 52  FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N F +S +   A   + +L + G +P+  T   +I  +C   +I++A  +V  M E G
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG 171

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V Y T+ID+ CK G+++ A  + + M   G++ + +   ++++ LC   +  +A 
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +LL    KR    D +++  LI  + ++ K   A +L++EM +  I P+ FTY ++I GL
Sbjct: 232 LLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ ++A  M   +   G  PD   + ++I+GFC   +VE A++   +M +K    + 
Sbjct: 292 CMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   L+ G    G    A + F   + +G   +  TYN L+  LC   ++  A  +  +
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFED 411

Query: 421 MEEKKLG---PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           M+++++    P+  TY  +   L  +G+LE+A      ++  G +  +           +
Sbjct: 412 MQKREIDGVPPNIRTYNVLLHGLCYNGKLEKA------LMVFGDMQKR-----------D 454

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +D   I+Y+  I   C  G+ KDAL +F     KG+  N  TY  +++GL +
Sbjct: 455 MDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFR 506



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 179/352 (50%), Gaps = 3/352 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y TI+D+L K G ++    L + M+  G+ P+   Y  LV+G C  G  ++A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M + K  PDV T+N LI+ +   G L +A  L  EM  + + P++ TY +LIN 
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               GR  EA ++   ++  G  P+ V +  +I  +CK  K++ A KI   M + G + +
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY TLI      G    A  +   M  +G+  N  T N +LH LC   K+++A M+  
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410

Query: 245 SASKR---GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
              KR   G   +  +Y  L+ G   + K  +AL ++ +M++R +     TY  +I G+ 
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMC 470

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           ++GK + A+++   L   G+ P+  T+ T+I G   EG + +A     KM E
Sbjct: 471 KAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKE 522



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +G  PD V Y ++++ L   G+  +   LL  M K+ + P+  T+N L+  + K G 
Sbjct: 202 MENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGK 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  + + M Q    P+++TY  LING C  G L+EA ++   ME+    PDVV Y +
Sbjct: 262 LLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTS 321

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +  +A K+  E+ + G+  N +T+  +I+ +   GK + A ++  +M   G
Sbjct: 322 LINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG 381

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK---GLKMNTITLNTILHTLCCEKKLD 237
             P+  TYN L+   C  G + +A  + + M ++   G+  N  T N +LH LC   KL+
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLE 441

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A M+     KR   +  ++Y  +I G  +  K   AL L+  +  + + P+  TY  MI
Sbjct: 442 KALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMI 501

Query: 298 WGLSQSGKTEQAIDMLNELLQSGM 321
            GL + G   +A  +  ++ + G+
Sbjct: 502 SGLFREGLMLEAHVLFRKMKEDGV 525



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 3/181 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   + +TY T++      GK N  +++   M  +G+ PN  TYN+L+   C  G + +A
Sbjct: 346 GLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKA 405

Query: 65  MRVVDLMTQ---NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + + + M +   +   P++ TYN+L++G C  G LE+A  +  +M+   +   ++TY  +
Sbjct: 406 LMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTII 465

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I    ++G+  +A  L   L   G+KPN VT+  MI    +EG + +A  + R M+E+G 
Sbjct: 466 IQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525

Query: 182 S 182
           S
Sbjct: 526 S 526


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 246/527 (46%), Gaps = 18/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY  ++ AL K+G + +   L   M+ +G+      YN L++GYCK G 
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  ++  M +    P   +Y+ LI G C  G L     L +EM    +  +  T+  
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 483

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +  +  EA +L D++ +  + PN VT N+MI+ YC  G I KA ++   M E G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY +LI   C    + +A   +  +      +N  +L  +L+    E +  E Y
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +  + RG  LD VS+  ++    +     ++  L+ EMKE+ + P    Y  MI  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+     QA++  ++++  G  P+  T   +I+  C  G +  A     +M+  +  P+ 
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N  L     EG +EKA K   S +L+G     V++N LI  LCK  ++++A  L+S+
Sbjct: 724 FTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSK 782

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           + E    PD  +Y+ I   L + G + +A +  + M+  G                 + P
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG-----------------LKP 825

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++Y+  I      G    AL I+    + G+  N  TY  L++G+
Sbjct: 826 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 248/547 (45%), Gaps = 52/547 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y   + A  +   L+  R L+  M+ +G+  +   YN+L+ G CK   ++EA+ V 
Sbjct: 197 DEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVK 256

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           ++M       D  TY  L+ G+C    LE A R+  +M  L  +P     + +I+   + 
Sbjct: 257 NVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKK 316

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
               EAF L  +L + G+ PN   +N +I   CK  + D A ++ + M   G  P+ VTY
Sbjct: 317 ELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 376

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LI A CK G +E+A  + D M  KG+K+     N++++  C +  LD A  LL+   K
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G      SY  LI G  R+   +  ++L  EM ER I  + +T+ A+I G  +  K ++
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  + ++++ S +IP+E TFN +I G+C  G + KA Q +++MVE   KPD  T   L+S
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 369 GLC-----------------------------------REGILEKALKFFRSWILKGKAV 393
           GLC                                   REG   +    +    ++G  +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D V++  ++ +  K+   E +  L  EM+E+ + PD   Y  +  AL +   + +A    
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             MV  G                   P++++++  IN  C  G    A  + +E     +
Sbjct: 677 DQMVVDG-----------------YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV 719

Query: 514 AINKSTY 520
             NK TY
Sbjct: 720 LPNKFTY 726



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 185/401 (46%), Gaps = 18/401 (4%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           GI  N  T + ++    K  +   A  +   M ++G   D   Y   I A C++ N++ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++  M  +G+K + +  N +++ LC   ++ EA  + N     G   DEV+Y TL+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + R E+   AL++  +M     +PS    + MI  L +    E+A  +  +L   GM+P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +N +I   C   + + A +   +M  +  +P+ VT  IL+  LC+ G++E AL  F 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               KG  V    YN+LI+  CK+  L+ A GLLS M ++ L P   +Y+ +   L  +G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 445 RLEEAQKFTSIMVE----------TGKINHQVVQPNTSKTPEEID--------PSSISYS 486
            L    +    M E          T  IN         +     D        P+ ++++
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I  +C  G  + A Q++++  + G+  +  TY +L++GL
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+ +N  T + IL +L   ++   A  L +   + G +LDE  Y   I  Y      + A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             L   M+   +  S   YN +++GL ++ + ++A+++ N ++  G+  DE T+ T+++G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC   ++E AL+  + M+   F P    C+ ++  L ++ ++E+A          G   +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
              YN LI  LCK  R +DA  L  EM  + L P+  TYA +  AL + G +E+A     
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 455 IMVETG----------KINHQVVQPNTSK--------TPEEIDPSSISYSEKINEHCSQG 496
            M + G           IN    Q +  +          E + P++ SYS  I   C  G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                +++  E  ++GIA N  T+  L+NG  K +K
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 148/331 (44%), Gaps = 34/331 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PDN TY +++  L     +++  + ++D++    V N  +   L+ G+ + G   E 
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTET 602

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M       D+ ++ +++         E++  L +EM+   + PD + Y  +I+ 
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA---CK--IVRNMEEN 179
             +    ++A    D++   G  PN VTH ++I   CK G +  A   CK  +  N+  N
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 180 GFSPDC-----------------------------VTYNTLIDANCKAGNMEEAFRMMDV 210
            F+ +C                             V++N LI   CKAG ++EA  +M  
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSK 782

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           +   G   + I+ +TI+H LC    +++A+ L N    +G   D V+Y   I       +
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGE 842

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +++AL ++  M    + P+  TY A++ G+S
Sbjct: 843 SDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 227/457 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G   D +T N +++ L +   +     +L  M K GL P   T   L++G C  G + +
Sbjct: 106 LGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQ 165

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ + D M +     DV+TY +LING C  G    A    ++ME     P+VV Y+T+++
Sbjct: 166 AVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMD 225

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G   EA  L  E++  G++PN VT+  +I+  C  G+  +A  ++  M + G  P
Sbjct: 226 GLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRP 285

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D    N L+DA CK G + +A  ++  M   G   +  T N+++H  C + K++EA  + 
Sbjct: 286 DLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVF 345

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    RG   D V + +LI G+ +D+  N+A+ L +EM +   +P   T+  +I G  Q+
Sbjct: 346 HLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQA 405

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+   A ++   + + G +P+  T   I+ G C E  + +A+     M + +   +IV  
Sbjct: 406 GRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIY 465

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +ILL G+C  G L  A + F S   KG  ++   Y  +I  LCK+  L+ A  LL  MEE
Sbjct: 466 SILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEE 525

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
               P+  TY      L+    +  + K+ +IM + G
Sbjct: 526 NGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 230/515 (44%), Gaps = 21/515 (4%)

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL-PDVWTYN 84
           ++E  DL   M +   +P+   + +L+    +L     A+ +V  M  +  +  D  T N
Sbjct: 57  IDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLN 116

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           ++IN  C   ++   F +   M  L L P V+T  TLIN     G   +A  L D +++ 
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKM 176

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
               +  T+ ++I   CK G    A   +R MEE  + P+ V Y+T++D  CK G + EA
Sbjct: 177 WYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +   M  KG++ N +T   ++  LC   +  EA  LL+   K G   D      L+  
Sbjct: 237 LNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDA 296

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + ++ K  +A  +   M      P  FTYN++I       K  +A+ + + ++  G +PD
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPD 356

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              F ++IHG+C +  + KA+    +M +  F PD+ T   L+ G C+ G    A + F 
Sbjct: 357 IVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFL 416

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           +    G+  +  T   ++  LCKE  L +A  L   ME+  L  +   Y+ +   +  +G
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAG 476

Query: 445 RLEEA-QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           +L  A + F+S+  +  +IN  +                  Y+  I   C QG    A  
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYI------------------YTIMIKGLCKQGSLDKAED 518

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +     + G   N  TY   + GL+  +K I++++
Sbjct: 519 LLINMEENGCLPNNCTYNVFVQGLLT-KKEIARSI 552



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 184/363 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y+TI+D L K G ++E  +L S+M  +G+ PN  TY  L+ G C  G  KEA  +
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSL 274

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +    PD+   N+L++ +C  G + +A  +   M      PDV TYN+LI+ +  
Sbjct: 275 LDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL 334

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             +  EA ++   +   G  P+ V    +I  +CK+  I+KA  ++  M + GF PD  T
Sbjct: 335 QNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVAT 394

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           + TLI   C+AG    A  +   M + G   N  T   IL  LC E  L EA  L  +  
Sbjct: 395 WTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAME 454

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K    L+ V Y  L+ G     K N A +L+  +  + +  + + Y  MI GL + G  +
Sbjct: 455 KSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLD 514

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A D+L  + ++G +P+  T+N  + G  ++ ++ +++++   M +K F  D  T   ++
Sbjct: 515 KAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFII 574

Query: 368 SGL 370
           + L
Sbjct: 575 NYL 577



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 211/463 (45%), Gaps = 20/463 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHN 154
           ++EA  L + M  +K LP V  +  L+           A  L+  +    GI+ + +T N
Sbjct: 57  IDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLN 116

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           I+I   C+   +     ++  M + G  P  +T  TLI+  C  GN+ +A  + D M + 
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKM 176

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
              ++  T   +++ LC       A   L    +R +  + V Y T++ G  +D   + A
Sbjct: 177 WYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           L L  EM  + + P+  TY  +I GL   G+ ++A  +L+E+++ GM PD    N ++  
Sbjct: 237 LNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDA 296

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC EG+V +A      M+     PD+ T N L+   C +  + +A++ F   + +G+  D
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPD 356

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            V + +LI   CK++ +  A  LL EM +    PD  T+  +     ++GR   A++   
Sbjct: 357 IVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFL 416

Query: 455 IMVETGKINH------------------QVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
            M + G++ +                  + V    +     +D + + YS  ++  CS G
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAG 476

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +   A ++F     KG+ IN   Y  ++ GL K + S+ KA D
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYIYTIMIKGLCK-QGSLDKAED 518



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 162/333 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY  ++  L   G+  E   LL +M K G+ P+    NILV  +CK G 
Sbjct: 243 MNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGK 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  V+  M      PDV+TYN LI+ +C    + EA R+   M S   LPD+V + +
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTS 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + +     +A  L++E+ + G  P+  T   +I  +C+ G+   A ++  NM + G
Sbjct: 363 LIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYG 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  T   ++D  CK   + EA  +   M +  L +N +  + +L  +C   KL+ A+
Sbjct: 423 QVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAW 482

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +S   +G  ++   Y  +I G  +    ++A  L   M+E   +P+  TYN  + GL
Sbjct: 483 ELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGL 542

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
               +  ++I  L  +   G   D  T   II+
Sbjct: 543 LTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 117/226 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD V + +++    K   +N+   LL +M K G VP+  T+  L+ G+C+ G    A
Sbjct: 352 GRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAA 411

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +   +P++ T  ++++G C   +L EA  L K ME   L  ++V Y+ L++ 
Sbjct: 412 KELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDG 471

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G+   A++L   L   G++ N   + IMIK  CK+G +DKA  ++ NMEENG  P+
Sbjct: 472 MCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPN 531

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
             TYN  +        +  + + + +M  KG  ++  T   I++ L
Sbjct: 532 NCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYL 577



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 70/159 (44%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G +P+  T   ILD L K+  L+E   L   M+K  L  N   Y+IL+ G C  G 
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  +   +       +V+ Y ++I G C  G L++A  L   ME    LP+  TYN 
Sbjct: 478 LNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNV 537

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            +           + K +  + + G   +A T   +I +
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINY 576


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 226/442 (51%), Gaps = 9/442 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T++ ++  L K G+L E  +  + M ++  VPN    N+L++  C+ G + +AM +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLINRFF 126
              +   +  P V T N+LING+C   +L++A  L  EME +  L+P+  TY  +I  + 
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDC 185
           +  R  +A +L++E        + +    + + +CK  ++D+A +++ +M E+    PD 
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V +N +I   CKAG + EA+ M++ +   G   N +T  T++   C    L EA  L   
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 246 ASKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            S R ++ +   V++  LI+G  + ++   A +L  +MK R +   TFTY  ++ GL + 
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+T +   +  E+L+ G  P   T+ T++H  C  G ++ A Q    MV K   PD+ T 
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +LL GL   G +  A +FF   + +     +V Y+ L+   CK   +++A     EM +
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415

Query: 424 KKLGPDRYTYAAIHTALVESGR 445
           ++L PD  T   +   L + GR
Sbjct: 416 RRLAPDPATCKLLVEMLCKRGR 437



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 221/420 (52%), Gaps = 9/420 (2%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           PNR T+++L++G CK G L EA+   + M +   +P++   N+L+   C AG +++A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYC 161
                 ++  P V+T N LIN F E     +A +L  E++++  + P A T+  +IK YC
Sbjct: 61  ---FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNT 220
           K  ++D+A +++   E +  S D +   ++    CKA  ++EA++++ D++ +K  K + 
Sbjct: 118 KMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +  N I+H  C   ++ EAY +L +    G   + V+Y TLI G+ +    + AL+L+  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 281 MKER--QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           +  R     P+  T+NA+I GL ++ + E A +++ ++    +  D  T+ T++ G C +
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+  +  +   +M+ +   P +VT   L+   C+ G L+ A +  RS + KG   D  TY
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             L+  L +  ++  A     ++  ++  P    Y+A+     ++  ++EA K+   M++
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 198/376 (52%), Gaps = 6/376 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWL 61
           G  C P  +T N +++   +   L++  +L  +M+K   LVP  TTY  ++  YCK+  L
Sbjct: 63  GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNT 120
            +A ++++  +   S  DV     +  G+C A  ++EA++L  +M E     PD+V +N 
Sbjct: 123 DQARQLLEESSCCSS--DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI--VRNMEE 178
           +I+ F ++GR  EA+++++ L   G  PNAVT+  +I  +CK G + +A ++  V +  +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +   P+ VT+N LI   CKA  +E AF ++  M  + L+ +T T  T++  LC + +  E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              +     + G     V+Y TL+  + +      A ++   M  + I P   TY  ++ 
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++GK   A +   ++L+    P    ++ ++ G C    V++A++++ +M+++   P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420

Query: 359 DIVTCNILLSGLCREG 374
           D  TC +L+  LC+ G
Sbjct: 421 DPATCKLLVEMLCKRG 436



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 213/485 (43%), Gaps = 76/485 (15%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+ +T+++LI G C AG L EA     +M     +P++   N L+    ++G   +A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 138 IDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDA 194
                  GI+  P+ +T NI+I  +C+   +DKA ++   ME+N    P+  TY  +I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            CK   +++A ++++         + I + ++    C  +++DEAY LL           
Sbjct: 116 YCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLL----------- 162

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
                                   D ++++   P    +N +I G  ++G+  +A +ML 
Sbjct: 163 -----------------------LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLE 199

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF--KPDIVTCNILLSGLCR 372
            L+  G +P+  T+ T+I GFC  G + +ALQ    +  +    +P++VT N L+SGLC+
Sbjct: 200 TLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCK 259

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              LE A +  +    +    D+ TY TL+  LCK+ R  +   +  EM  +   P   T
Sbjct: 260 ADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVT 319

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP----------------- 475
           Y  +  A  ++G L++AQ+    MV  G      + P+ +                    
Sbjct: 320 YTTLVHAHCKAGSLQDAQQVIRSMVAKG------IPPDVTTYTVLLEGLFENGKVRTATE 373

Query: 476 -------EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  E   P ++ YS  +   C      +A++ + E   + +A + +T   L+  L 
Sbjct: 374 FFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLC 433

Query: 529 KRRKS 533
           KR ++
Sbjct: 434 KRGRT 438



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 99/195 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N ++  L K  +L    +L+  MK + L  +  TY  L+ G CK G   E  RV
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M +    P V TY  L++  C AG L++A ++ + M +  + PDV TY  L+   FE
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+   A +  +++      P AV ++ +++  CK   +D+A K    M +   +PD  T
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424

Query: 188 YNTLIDANCKAGNME 202
              L++  CK G  +
Sbjct: 425 CKLLVEMLCKRGRTD 439



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 66/127 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VTY T++ A  K G L + + ++  M  +G+ P+ TTY +L+ G  + G ++ A
Sbjct: 312 GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + + + +  P    Y+ L+ G C A +++EA +   EM   +L PD  T   L+  
Sbjct: 372 TEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEM 431

Query: 125 FFESGRS 131
             + GR+
Sbjct: 432 LCKRGRT 438


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 279/572 (48%), Gaps = 40/572 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLN--EVRDLLSDMKKQGLVPNRTTYNILVSGY--- 55
           M   GC P  V YN  + ++  + KL   ++ DL   +  + L  N     + V+ +   
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262

Query: 56  -CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            C +G   +A +++  M +   +PD  TY+ +I   C+A  +E+AF L +EM+ + + PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TY  LI+ F ++G   +A  L +E+   G  P  VT+  +I  Y K  ++ +A  I  
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM-MDVMG---------------RKGLKM 218
            M + G  P+ VTY  L+D  CKAGN+ +AF +   ++G               R  L  
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N +T   ++  LC   K+D A+ LL++    G   + + Y  LI G+ +  K + A +++
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            +M +   +PS  TY ++I  + + G+ + A+ +L+++L+    P+  T+  +I G C  
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+ EKAL+  + M EK   P++VT   L+ GL + G ++ +L  F     KG + + VTY
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 399 NTLISSLCKERRLEDAFGLLSEMEE----KKLGPDRYTYAAIHTALVES-GRLEEAQKFT 453
             LI+ LC    L+ A  LL EM++    K L   R        + + S G LEE + + 
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYG 682

Query: 454 SIMV------------ETGKINHQV-VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
           ++ +            + G++   + +     + P  +   +  Y+  I   C   + ++
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 742

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A +++ E  ++G     S ++ L+ GL++ +K
Sbjct: 743 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 247/573 (43%), Gaps = 45/573 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P  VTYN ++  L   G+++    +  +M + G   +R T        CK G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+   D++ +     D      +I+G   A   +EA      M     +P+VVTY T
Sbjct: 91  WADAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +     ++I+ +   G  PN    N ++  YC E     A K++  M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 181 FSPDCVTYNTLIDANCKAGNMEE------AFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             P  V YN  I + C    +        A ++   M      +N + +      LC   
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K D+A+ L+    ++G+  D  +Y  +IT      K  +A  L+ EMK   + P  +TY 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I    ++G  EQA  +  E+   G  P   T+  +IH +    QV +A    ++MV+ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS----------------VTY 398
             +P+ VT   L+ GLC+ G + KA + +   I    + DS                VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK------- 451
             L+  LCK  +++ A  LL  M      P+   Y A+     ++G+++ AQ+       
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 452 ---------FTSI---MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
                    +TS+   M + G+++   ++  +    +   P+ ++Y+  I+  C  G  +
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLD-LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            AL++     +KG + N  TY  L++GL K  K
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 203/397 (51%), Gaps = 22/397 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM----------------KKQGLVPNRTTY 48
           GC P++VTY  ++D L K G +++  ++ + +                 +  L PN  TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             LV G CK   +  A  ++D M  +   P+   Y+ LI+G+C AG ++ A  +  +M  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
              LP V TY +LI+R F+ GR   A K++ ++ +    PN VT+  MI   C+ G+ +K
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A K++  MEE G SP+ VTY  LID   KAG ++ +  +   M RKG   N +T   +++
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            LC    LD+A +LL    K+ Y+   +  Y   I G+ +   A+  L + +EM+    +
Sbjct: 628 HLCAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGFSKSFIAS--LGILEEMESYGTV 684

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ--SGMIPDETTFNTIIHGFCSEGQVEKAL 345
           P    Y  +I   S++G+ E A+++  E+++  S +  D   + ++I   C   QVE+A 
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAF 744

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           + +++M  + F P++     L+ GL      ++AL+ 
Sbjct: 745 RLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 246/546 (45%), Gaps = 87/546 (15%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+ + V        L   GK ++   L+ +M ++G VP+ +TY+ +++  C    +++A 
Sbjct: 249 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 308

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M      PDV+TY +LI+ +C AG++E+A  L +EM S+   P VVTY  LI+ +
Sbjct: 309 LLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAY 368

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--------- 176
            ++ +  +A  +   + + G +PN VT+  ++   CK G I KA ++   +         
Sbjct: 369 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 428

Query: 177 -------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
                  + +  +P+ VTY  L+D  CKA  ++ A  ++D M   G + N I  + ++  
Sbjct: 429 DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 488

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK------------------- 270
            C   K+D A  +    +K GY     +Y +LI   F+D +                   
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548

Query: 271 ----------------ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
                           + +ALKL   M+E+   P+  TY A+I GL ++GK + ++D+  
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFT 608

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKA---------------LQFHNKMVE---KSF 356
           ++ + G  P+  T+  +I+  C+ G ++KA               LQ +   ++   KSF
Sbjct: 609 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 668

Query: 357 ---------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYN 399
                           P      +L+    + G LE A++  +  +    +V  D+  Y 
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 728

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           +LI +LC   ++E+AF L SEM  +   P+   +  +   LVE  + +EA +    +   
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHE 788

Query: 460 GKINHQ 465
           G +N Q
Sbjct: 789 G-VNWQ 793



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 177/407 (43%), Gaps = 27/407 (6%)

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           D L + G +P+ VT+N +++     G++D   ++ + M E+GF  D  T      A CK 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G   +A   +D++ R+  K++T+    ++  L      DEA   L+         + V+Y
Sbjct: 89  GRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TL++G+ + ++     ++ + M      P+   +N+++           A  +LN +  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEK------ALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            G  P    +N  I   C + ++        A + + +M+  +   + V        LC 
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 265

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G  +KA +  +  + KG   D+ TY+ +I+ LC   ++E AF L  EM+   + PD YT
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +  +  ++G +E+AQ     M   G                   P+ ++Y+  I+ +
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVG-----------------CSPTVVTYTALIHAY 368

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
               +   A  IF      G   N  TY  L++GL K   +ISKA +
Sbjct: 369 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK-AGNISKAFE 414



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           +  A D  + L   G  P + T+N ++    S GQV+   +   +M E  F  D  T   
Sbjct: 21  SHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGC 80

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
               LC+EG    AL        K   +D+V    +IS L +    ++A   L  M    
Sbjct: 81  FAHALCKEGRWADALDMIEREDFK---LDTVLCTHMISGLMEASYFDEAMSFLHRMRCNS 137

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  TY  + +  ++  +L   ++  ++M+  G        PN S            +
Sbjct: 138 CIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG------CNPNPSL-----------F 180

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           +  ++ +C++  Y  A ++       G       Y N+  G I
Sbjct: 181 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY-NIFIGSI 222


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 250/521 (47%), Gaps = 17/521 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y   + A  +   L+  R LL+ M+ +G+  +   YN+L+ G C+   + EA+ V 
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M +   + D  TY  L+ G+C    LE A  +  +M SL  +P V + + +++   + 
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +AF+L   L E G+ PN    N +I   CK+ +  +A ++ R M   G  P+ VTY
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
             LI + CK G M++A  M D M  KG+++     N++++  C      +A  LLN   +
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G      SY  LI G  R      A++L  EM    +  + +T+  +I G  + G  ++
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  + ++++ S ++P+E TFN +I G+C  G V KA Q +++MV++   PD  T   L+S
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            LC      KA +F          ++S +  TL+   CKE RL + + +  EM  + +  
Sbjct: 554 VLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKL 613

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D  ++  I  A +   +L + +K + +  E  +              + + P ++ ++  
Sbjct: 614 DLISFTVIVYAAL---KLHDGEKISVLFREMKE--------------KGVKPDNVFHTCM 656

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+ H  +     AL  +++    G + N  TY  L+N L K
Sbjct: 657 IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCK 697



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 231/460 (50%), Gaps = 1/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY  ++ +L K+G +++   +   M+++G+      YN L++GYC+   
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDN 420

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +++ M +    P   +Y+ LI G C  G L  A  L +EM    +  +V T+ T
Sbjct: 421 FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTT 480

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   EA +L D++ +  + PN VT N+MI+ YC+ G + KA ++   M + G
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  TY +LI   C      +A   +D +    + +N+ +L T+++  C E +L E Y
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETY 600

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +    RG  LD +S+  ++    +     +   L+ EMKE+ + P    +  MI   
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVH 660

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+     QA++  ++++  G  P+  T+  +I+  C  G +  A     +M+   F P+ 
Sbjct: 661 SKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS 720

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N  L  L  EG LEKA K   + IL+G   ++VT+NTLI   CK  +++ A  L+  
Sbjct: 721 FTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQN 779

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             E    PD  +Y+ I   L + G + +A +  + M+  G
Sbjct: 780 NTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKG 819



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 268/610 (43%), Gaps = 93/610 (15%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G     V YN ++  L +  ++ E  ++ + M ++G+V +  TY  LV G+C+   
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A+ + D M     +P V + + +++G    G +++AFRL   +  L ++P++   N 
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNA 340

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI++  +  R  EA +L   +   G++PN VT+ I+I   CK G +D A  +   M E G
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                  YN+LI+  C+  N  +A  +++ M  KGL  +  + + ++  LC +  L  A 
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    ++ G   +  ++ TLI+G+ +D   + A +L+D+M +  ++P+  T+N MI G 
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTF-------------------------------- 328
            + G   +A  + ++++  G+ PD  T+                                
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNS 580

Query: 329 ---NTIIHGFCSEGQ--------------------------VEKALQFHN---------K 350
               T+++GFC EG+                          V  AL+ H+         +
Sbjct: 581 FSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFRE 640

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M EK  KPD V    ++    +E  + +AL  +   I  G + + VTY  LI+ LCK   
Sbjct: 641 MKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGY 700

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE------------ 458
           L  A  L  EM   +  P+ +TY      L   G LE+A+   + ++E            
Sbjct: 701 LSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTL 760

Query: 459 ------TGKINHQV--VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                  G+I   +  +Q NT        P  ISYS  INE C  G    A Q++ E   
Sbjct: 761 IKGFCKAGQIQGAIDLMQNNTESG---FFPDCISYSTIINELCKVGDINKAFQLWNEMLY 817

Query: 511 KGIAINKSTY 520
           KG+  +   Y
Sbjct: 818 KGLKPDIVAY 827



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 242/505 (47%), Gaps = 17/505 (3%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           +  +  D+L      G+   + T + ++    K+     A  + D M Q K   D + Y 
Sbjct: 140 RARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYT 199

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
             I  +C    L+ A  L   MES  +    V YN L+     + R +EA ++ + + E 
Sbjct: 200 AGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER 259

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           GI  + VT+  ++  +C+  +++ A ++  +M    F P   + + ++D   K G++++A
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           FR+   +G  G+  N    N ++  LC +++  EA  L    + RG   +EV+Y  LI  
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHS 379

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             +    + AL ++D M+E+ I  + + YN++I G  Q     QA  +LNE+++ G+ P 
Sbjct: 380 LCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPS 439

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             +++ +I G C +G +  A++ H +M       ++ T   L+SG C++G +++A + F 
Sbjct: 440 AASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFD 499

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             I      + VT+N +I   C+   +  AF L  +M ++ L PD YTY ++ + L  + 
Sbjct: 500 KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTL 559

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
              +A++F   +      N+ VV             +S S +  +   C +GR  +   I
Sbjct: 560 GAMKAKEFVDDLE-----NNCVVL------------NSFSLTTLMYGFCKEGRLTETYHI 602

Query: 505 FEETRQKGIAINKSTYMNLMNGLIK 529
           ++E R +G+ ++  ++  ++   +K
Sbjct: 603 WDEMRARGVKLDLISFTVIVYAALK 627



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 36/418 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   +Y+ ++  L +KG L    +L  +M + G+  N  T+  L+SG+CK G + EA
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+ D M  +  +P+  T+N++I G+C  G + +AF+L  +M    L PD  TY +LI+ 
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISV 554

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI------------------ 166
              +  +M+A + +D+L+ + +  N+ +   ++  +CKEG++                  
Sbjct: 555 LCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLD 614

Query: 167 -----------------DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
                            +K   + R M+E G  PD V +  +ID + K  N+ +A    D
Sbjct: 615 LISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWD 674

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G   N +T   +++ LC    L  A +L        +  +  +Y   +     + 
Sbjct: 675 KMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEG 734

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           +  +A  L   + E   + +T T+N +I G  ++G+ + AID++    +SG  PD  +++
Sbjct: 735 ELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYS 793

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           TII+  C  G + KA Q  N+M+ K  KPDIV  NIL+      G  +K L  +   +
Sbjct: 794 TIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMV 851



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 17/316 (5%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           G+ M   T + IL  L   ++   A  L +   +  + LDE  Y   I  Y      + A
Sbjct: 155 GIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGA 214

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             L   M+ + +  S   YN +++GL ++ +  +A+++ N +++ G++ DE T+ T+++G
Sbjct: 215 RGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYG 274

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC   ++E AL+  + M+   F P + +C+ ++ GL + G ++KA +        G   +
Sbjct: 275 FCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPN 334

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
               N LI  LCK+RR  +A  L   M  + L P+  TYA +  +L + G +++A     
Sbjct: 335 LFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFD 394

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            M E G                 I  +   Y+  IN +C    +  A  +  E  +KG+A
Sbjct: 395 RMREKG-----------------IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLA 437

Query: 515 INKSTYMNLMNGLIKR 530
            + ++Y  L+ GL ++
Sbjct: 438 PSAASYSPLIAGLCRK 453



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 162/370 (43%), Gaps = 17/370 (4%)

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           Y +  +   A  ++R    +G +    T + ++ A  K      A  + D M +    ++
Sbjct: 135 YLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLD 194

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
                  +   C  + LD A  LL     +G     V Y  L+ G  R+ +   A+++ +
Sbjct: 195 EYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKN 254

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M ER I+    TY  +++G  ++ + E A++M +++L    +P   + + ++ G    G
Sbjct: 255 SMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRG 314

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
            ++KA +    + E    P++  CN L+  LC++    +A + FR    +G   + VTY 
Sbjct: 315 HIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYA 374

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI SLCK   ++DA  +   M EK +    Y Y ++     +     +A+   + MVE 
Sbjct: 375 ILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK 434

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 + PS+ SYS  I   C +G    A+++  E  + G++ N  T
Sbjct: 435 G-----------------LAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYT 477

Query: 520 YMNLMNGLIK 529
           +  L++G  K
Sbjct: 478 FTTLISGFCK 487



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 123/227 (54%), Gaps = 1/227 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D +++  I+ A  K     ++  L  +MK++G+ P+   +  ++  + K   
Sbjct: 606 MRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEEN 665

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   D M  +   P+V TY +LIN  C +G L  A  L +EM   + LP+  TYN 
Sbjct: 666 IVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNC 725

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            ++ F  +   +E  K++      G   N VT N +IK +CK G+I  A  +++N  E+G
Sbjct: 726 FLD-FLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESG 784

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           F PDC++Y+T+I+  CK G++ +AF++ + M  KGLK + +  N ++
Sbjct: 785 FFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 1/180 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTY  +++ L K G L+  + L  +M     +PN  TYN  +      G L++A
Sbjct: 680 GCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA 739

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+        L +  T+N LI G+C AG ++ A  L +        PD ++Y+T+IN 
Sbjct: 740 -KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINE 798

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   +AF+L +E+   G+KP+ V +NI+I+W    G+ DK   I  +M    ++ D
Sbjct: 799 LCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADD 858


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 279/572 (48%), Gaps = 40/572 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLN--EVRDLLSDMKKQGLVPNRTTYNILVSGY--- 55
           M   GC P  V YN  + ++  + KL   ++ DL   +  + L  N     + V+ +   
Sbjct: 138 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 197

Query: 56  -CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            C +G   +A +++  M +   +PD  TY+ +I   C+A  +E+AF L +EM+ + + PD
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TY  LI+ F ++G   +A  L +E+   G  P  VT+  +I  Y K  ++ +A  I  
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM-MDVMG---------------RKGLKM 218
            M + G  P+ VTY  L+D  CKAGN+ +AF +   ++G               R  L  
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N +T   ++  LC   K+D A+ LL++    G   + + Y  LI G+ +  K + A +++
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            +M +   +PS  TY ++I  + + G+ + A+ +L+++L+    P+  T+  +I G C  
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+ EKAL+  + M EK   P++VT   L+ GL + G ++ +L  F     KG + + VTY
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557

Query: 399 NTLISSLCKERRLEDAFGLLSEMEE----KKLGPDRYTYAAIHTALVES-GRLEEAQKFT 453
             LI+ LC    L+ A  LL EM++    K L   R        + + S G LEE + + 
Sbjct: 558 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYG 617

Query: 454 SIMV------------ETGKINHQV-VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
           ++ +            + G++   + +     + P  +   +  Y+  I   C   + ++
Sbjct: 618 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 677

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A +++ E  ++G     S ++ L+ GL++ +K
Sbjct: 678 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 709



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/562 (23%), Positives = 242/562 (43%), Gaps = 80/562 (14%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK---LGWLKEAM 65
           D V    ++  L +    +E    L  M+    +PN  TY  L+SG+ K   LGW K   
Sbjct: 41  DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK--- 97

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           R++++M      P+   +N L++ +CN      A++L   M +    P  V YN  I   
Sbjct: 98  RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 157

Query: 126 FES-----------------------------------------GRSMEAFKLIDELDEH 144
                                                       G+  +AF+LI E+   
Sbjct: 158 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 217

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G  P+  T++ +I + C   K++KA  + + M+  G +PD  TY  LID+ CKAG +E+A
Sbjct: 218 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 277

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             + + M   G     +T   ++H     K++ +A  + +     G   ++V+YG L+ G
Sbjct: 278 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 337

Query: 265 YFRDEKANRALKLWDEM----------------KERQIMPSTFTYNAMIWGLSQSGKTEQ 308
             +    ++A +++ ++                    + P+  TY A++ GL ++ K + 
Sbjct: 338 LCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDH 397

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A ++L+ +L SG  P+   ++ +I GFC  G+++ A +   +M +  + P + T   L+ 
Sbjct: 398 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 457

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            + ++G L+ A+K     +      + VTY  +I  LC+    E A  LLS MEEK   P
Sbjct: 458 RMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 517

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +  TY A+   L ++G+++ +    + M   G                   P+ ++Y   
Sbjct: 518 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG-----------------CSPNYVTYRVL 560

Query: 489 INEHCSQGRYKDALQIFEETRQ 510
           IN  C+ G    A  +  E +Q
Sbjct: 561 INHLCAAGLLDKARLLLGEMKQ 582



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 203/397 (51%), Gaps = 22/397 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM----------------KKQGLVPNRTTY 48
           GC P++VTY  ++D L K G +++  ++ + +                 +  L PN  TY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             LV G CK   +  A  ++D M  +   P+   Y+ LI+G+C AG ++ A  +  +M  
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
              LP V TY +LI+R F+ GR   A K++ ++ +    PN VT+  MI   C+ G+ +K
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A K++  MEE G SP+ VTY  LID   KAG ++ +  +   M RKG   N +T   +++
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWDEMKERQIM 287
            LC    LD+A +LL    K+ Y+   +  Y   I G+ +   A  +L + +EM+    +
Sbjct: 563 HLCAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGFSKSFIA--SLGILEEMESYGTV 619

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ--SGMIPDETTFNTIIHGFCSEGQVEKAL 345
           P    Y  +I   S++G+ E A+++  E+++  S +  D   + ++I   C   QVE+A 
Sbjct: 620 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAF 679

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           + +++M  + F P++     L+ GL      ++AL+ 
Sbjct: 680 RLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 246/546 (45%), Gaps = 87/546 (15%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+ + V        L   GK ++   L+ +M ++G VP+ +TY+ +++  C    +++A 
Sbjct: 184 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 243

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M      PDV+TY +LI+ +C AG++E+A  L +EM S+   P VVTY  LI+ +
Sbjct: 244 LLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAY 303

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--------- 176
            ++ +  +A  +   + + G +PN VT+  ++   CK G I KA ++   +         
Sbjct: 304 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 363

Query: 177 -------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
                  + +  +P+ VTY  L+D  CKA  ++ A  ++D M   G + N I  + ++  
Sbjct: 364 DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 423

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK------------------- 270
            C   K+D A  +    +K GY     +Y +LI   F+D +                   
Sbjct: 424 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 483

Query: 271 ----------------ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
                           + +ALKL   M+E+   P+  TY A+I GL ++GK + ++D+  
Sbjct: 484 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFT 543

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKA---------------LQFHNKMVE---KSF 356
           ++ + G  P+  T+  +I+  C+ G ++KA               LQ +   ++   KSF
Sbjct: 544 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 603

Query: 357 ---------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYN 399
                           P      +L+    + G LE A++  +  +    +V  D+  Y 
Sbjct: 604 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 663

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           +LI +LC   ++E+AF L SEM  +   P+   +  +   LVE  + +EA +    +   
Sbjct: 664 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHE 723

Query: 460 GKINHQ 465
           G +N Q
Sbjct: 724 G-VNWQ 728



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 229/538 (42%), Gaps = 45/538 (8%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M + G   +R T        CK G   +A+   D++ +     D      +I+G   A  
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADAL---DMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
            +EA      M     +P+VVTY TL++ F +  +     ++I+ +   G  PN    N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE------AFRMMD 209
           ++  YC E     A K++  M   G  P  V YN  I + C    +        A ++  
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M      +N + +      LC   K D+A+ L+    ++G+  D  +Y  +IT      
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           K  +A  L+ EMK   + P  +TY  +I    ++G  EQA  +  E+   G  P   T+ 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +IH +    QV +A    ++MV+   +P+ VT   L+ GLC+ G + KA + +   I  
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 390 GKAVDS----------------VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             + DS                VTY  L+  LCK  +++ A  LL  M      P+   Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 434 AAIHTALVESGRLEEAQK----------------FTSI---MVETGKINHQVVQPNTSKT 474
            A+     ++G+++ AQ+                +TS+   M + G+++   ++  +   
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD-LAMKVLSQML 476

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +   P+ ++Y+  I+  C  G  + AL++     +KG + N  TY  L++GL K  K
Sbjct: 477 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 534


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 239/455 (52%), Gaps = 5/455 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  +T+NT+LD+ FK G L  V  +  +MK++ +  +  TYNIL++G+ K G ++EA
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R    M ++      +++N LI G+C  G+ ++A+ +  EM +  + P   TYN  I  
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A +L+  +      P+ V++N ++  Y K GK  +A  +  ++      P 
Sbjct: 353 LCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLID  C++GN+E A R+ + M  + +  + IT  T++        L  A  + +
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQS 303
              ++G   D  +Y T   G  R   +++A +L +EM       P    YN  I GL + 
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +AI+   ++ + G++PD  T+ T+I G+   GQ + A   +++M+ K   P ++T 
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +L+ G  + G LE+A ++      +G   + +T+N L+  +CK   +++A+  L +MEE
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           + + P++Y+Y  + +   +  + EE  K    M++
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 223/434 (51%), Gaps = 11/434 (2%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYN +++   K GK+ E R    DM++ G      ++N L+ GYCK G   +A  V D 
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M      P   TYN+ I   C+ G +++A  L   M +    PDVV+YNTL++ + + G+
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 389

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            +EA  L D+L    I P+ VT+N +I   C+ G ++ A ++   M      PD +TY T
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL---DEAYMLLNSAS 247
           L+    K GN+  A  + D M RKG+K +     T       E +L   D+A+ L     
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT---RAVGELRLGDSDKAFRLHEEMV 506

Query: 248 KRGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              ++  +++ Y   I G  +     +A++   ++    ++P   TY  +I G  ++G+ 
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A ++ +E+L+  + P   T+  +I+G    G++E+A Q+  +M ++  +P+++T N L
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L G+C+ G +++A ++      +G   +  +Y  LIS  C   + E+   L  EM +K++
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686

Query: 427 GPDRYTYAAIHTAL 440
            PD YT+ A+   L
Sbjct: 687 EPDGYTHRALFKHL 700



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 254/531 (47%), Gaps = 24/531 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP     N +L  L     +N+   +   M + G++P   T+N ++    K G L+  
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257

Query: 65  MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            ++ +++  +N    +V TYN+LING+   G +EEA R   +M          ++N LI 
Sbjct: 258 DKIWLEMKRRNIEFSEV-TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + + G   +A+ + DE+   GI P   T+NI I   C  G+ID A +++ +M     +P
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----AP 372

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V+YNTL+    K G   EA  + D +    +  + +T NT++  LC    L+ A  L 
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              + +  + D ++Y TL+ G+ ++   + A +++DEM  + I P  + Y     G  + 
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492

Query: 304 GKTEQAIDMLNELLQSGM-IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           G +++A  +  E++ +    PD T +N  I G C  G + KA++F  K+      PD VT
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              ++ G    G  + A   +   + K      +TY  LI    K  RLE AF   +EM+
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           ++ + P+  T+ A+   + ++G ++EA ++   M E G                 I P+ 
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-----------------IPPNK 655

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            SY+  I+++C   ++++ +++++E   K I  +  T+  L   L K  +S
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 706



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 176/388 (45%), Gaps = 80/388 (20%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TYN  + AL   G++++ R+LLS M      P+  +YN L+ GY K+G   EA
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEA 393

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D +      P + TYN LI+G C +G LE A RL++EM +  + PDV+TY TL+  
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453

Query: 125 FFESGR-----------------------------------SMEAFKLIDEL---DEHGI 146
           F ++G                                    S +AF+L +E+   D H  
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA- 512

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT---------------- 190
            P+   +N+ I   CK G + KA +  R +   G  PD VTY T                
Sbjct: 513 -PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571

Query: 191 -------------------LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
                              LI  + KAG +E+AF+    M ++G++ N +T N +L+ +C
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
               +DEAY  L    + G   ++ SY  LI+     EK    +KL+ EM +++I P  +
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           T+ A+   L +  ++ + ++ L  LL S
Sbjct: 692 THRALFKHLEKDHESRE-VEFLERLLLS 718



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 47/87 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +T+N +L  + K G ++E    L  M+++G+ PN+ +Y +L+S  C    
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLI 87
            +E +++   M   +  PD +T+  L 
Sbjct: 671 WEEVVKLYKEMLDKEIEPDGYTHRALF 697


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 226/457 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G   D +T N +++ L +   +     +L  M K GL P   T   L++G C  G + +
Sbjct: 106 LGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQ 165

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +VD M + +   DV+TY +LING C  G    A    ++ME     P+VV Y+T+++
Sbjct: 166 AVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMD 225

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G   EA  L  E+   G++PN VT+  +I+  C  G+  +   ++  M + G   
Sbjct: 226 GLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRL 285

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T N L+DA CK G + +A  ++  M   G   +  T N+++H  C + K++EA  + 
Sbjct: 286 DLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVF 345

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +    RG   D V + +LI G+ +D+  N+ + L +EM +   +P   T+  +I G  Q+
Sbjct: 346 HLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQA 405

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+   A ++   + + G +P+  T   I+ G C    + +A+     M + +   +IV  
Sbjct: 406 GRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIY 465

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +ILL G+C  G L  A + F S   KG  ++  TY  +I  LCK+  L+ A  LL  MEE
Sbjct: 466 SILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEE 525

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
               PD  TY      L+    +  + K+ +IM + G
Sbjct: 526 NGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 232/523 (44%), Gaps = 22/523 (4%)

Query: 20  LFKKGK---LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKS 76
           L K GK   ++E  DL   M     +P+   + +L+    +L     A+ +V  +  +  
Sbjct: 48  LCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLG 107

Query: 77  L-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
           +  D  T N++IN  C   ++   F +   M  L L P V+T   LIN     G   +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L+D +++     +  T+ ++I   CK G    A + +R MEE  + P+ V Y+T++D  
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK G + EA  +   M  KG++ N +T   ++  LC   +  E   LL+   K G  LD 
Sbjct: 228 CKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDL 287

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
            +   L+  + ++ K  +A  +   M      P  FTYN++I       K  +A+ + + 
Sbjct: 288 QTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           ++  G +PD   F ++IHG+C +  + K +    +M +  F PD+VT   L+ G C+ G 
Sbjct: 348 MVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGR 407

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
              A + F +    G+  +  T   ++  LCK   L +A  L   ME+  L  +   Y+ 
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSI 467

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   +  +G+L  A +  S +   G      +Q N             +Y+  I   C Q
Sbjct: 468 LLDGMCSAGKLNAAWELFSSLPGKG------LQINV-----------YTYTIMIKGLCKQ 510

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           G    A  +     + G   +  TY   + GL+  +K I++++
Sbjct: 511 GSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLT-KKEIARSI 552



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 183/363 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y+TI+D L K G ++E  +L S+M  +G+ PN  TY  L+ G C  G  KE   +
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSL 274

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +     D+ T N+L++ +C  G + +A  +   M      PDV TYN+LI+ +  
Sbjct: 275 LDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL 334

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             +  EA ++   +   G  P+ V    +I  +CK+  I+K   ++  M + GF PD VT
Sbjct: 335 QNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVT 394

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           + TLI   C+AG    A  +   M + G   N  T   IL  LC    L EA  L  +  
Sbjct: 395 WTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAME 454

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K    L+ V Y  L+ G     K N A +L+  +  + +  + +TY  MI GL + G  +
Sbjct: 455 KSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLD 514

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A D+L  + ++G +PD  T+N  + G  ++ ++ +++++   M +K F  D  T  I +
Sbjct: 515 KAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITI 574

Query: 368 SGL 370
           + L
Sbjct: 575 NYL 577



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 210/463 (45%), Gaps = 20/463 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHN 154
           ++EA  L + M S+K LP V  +  L+           A  L+  +    GI+ + +T N
Sbjct: 57  IDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLN 116

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           I+I   C+   +     ++  M + G  P  +T   LI+  C  GN+ +A  ++D M + 
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKM 176

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
              ++  T   +++ LC       A   L    +R +  + V Y T++ G  +D   + A
Sbjct: 177 RYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           L L  EM  + + P+  TY  +I GL   G+ ++   +L+E+++ GM  D  T N ++  
Sbjct: 237 LNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDA 296

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC EG+V +A      M+     PD+ T N L+   C +  + +A++ F   + +G   D
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPD 356

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            V + +LI   CK++ +     LL EM +    PD  T+  +     ++GR   A++   
Sbjct: 357 IVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFL 416

Query: 455 IMVETGKINH------------------QVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
            M + G++ +                  + V    +     +D + + YS  ++  CS G
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAG 476

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           +   A ++F     KG+ IN  TY  ++ GL K + S+ KA D
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYTYTIMIKGLCK-QGSLDKAED 518



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 160/327 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY  ++  L   G+  E   LL +M K G+  +  T NILV  +CK G 
Sbjct: 243 MSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGK 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  V+  M      PDV+TYN LI+ +C    + EA R+   M S   LPD+V + +
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTS 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + +     +   L++E+ + G  P+ VT   +I  +C+ G+   A ++  NM + G
Sbjct: 363 LIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYG 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  T   ++D  CK   + EA  + + M +  L +N +  + +L  +C   KL+ A+
Sbjct: 423 QVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAW 482

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +S   +G  ++  +Y  +I G  +    ++A  L   M+E   +P   TYN  + GL
Sbjct: 483 ELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGL 542

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETT 327
               +  ++I  L  +   G   D  T
Sbjct: 543 LTKKEIARSIKYLTIMRDKGFSVDAAT 569



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 70/159 (44%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G +P+  T   ILD L K   L+E   L   M+K  L  N   Y+IL+ G C  G 
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  +   +       +V+TY ++I G C  G L++A  L   ME    LPD  TYN 
Sbjct: 478 LNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNV 537

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            +           + K +  + + G   +A T  I I +
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINY 576


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 226/442 (51%), Gaps = 9/442 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T++ ++  L K G+L E  +  + M ++  VPN    N+L++  C+ G + +AM +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLINRFF 126
              +   +  P V T N+LING+C   +L++A  L  EME +  L+P+  TY  +I  + 
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDC 185
           +  R  +A +L++E        + +    + + +CK  ++D+A +++ +M E+    PD 
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V +N +I   CKAG + EA+ M++ +   G   N +T  T++   C    L EA  L   
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 246 ASKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            S R ++ +   V++  LI+G  + ++   A +L  +MK R +   TFTY  ++ GL + 
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+T +   +  E+L+ G  P   T+ T++H  C  G ++ A Q    MV K   PD+ T 
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            +LL GL   G +  A +FF   + +     +V Y+ L+   CK   +++A     EM +
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415

Query: 424 KKLGPDRYTYAAIHTALVESGR 445
           ++L PD  T   +   L + GR
Sbjct: 416 RRLAPDPATCKLLVEMLCKRGR 437



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 221/420 (52%), Gaps = 9/420 (2%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           PNR T+++L++G CK G L EA+   + M +   +P++   N+L+   C AG +++A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYC 161
                 ++  P V+T N LIN F E     +A +L  E++++  + P A T+  +IK YC
Sbjct: 61  ---FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNT 220
           K  ++D+A +++   E +  S D +   ++    CKA  ++EA++++ D++ +K  K + 
Sbjct: 118 KMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +  N I+H  C   ++ EAY +L +    G   + V+Y TLI G+ +    + AL+L+  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 281 MKER--QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           +  R     P+  T+NA+I GL ++ + E A +++ ++    +  D  T+ T++ G C +
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+  +  +   +M+ +   P +VT   L+   C+ G L+ A +  RS + KG   D  TY
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             L+  L +  ++  A     ++  ++  P    Y+A+     ++  ++EA K+   M++
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 198/376 (52%), Gaps = 6/376 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWL 61
           G  C P  +T N +++   +   L++  +L  +M+K   LVP  TTY  ++  YCK+  L
Sbjct: 63  GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNT 120
            +A ++++  +   S  DV     +  G+C A  ++EA++L  +M E     PD+V +N 
Sbjct: 123 DQARQLLEESSCCSS--DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI--VRNMEE 178
           +I+ F ++GR  EA+++++ L   G  PNAVT+  +I  +CK G + +A ++  V +  +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +   P+ VT+N LI   CKA  +E AF ++  M  + L+ +T T  T++  LC + +  E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              +     + G     V+Y TL+  + +      A ++   M  + I P   TY  ++ 
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++GK   A +   ++L+    P    ++ ++ G C    V++A++++ +M+++   P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420

Query: 359 DIVTCNILLSGLCREG 374
           D  TC +L+  LC+ G
Sbjct: 421 DPATCKLLVEMLCKRG 436



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 214/485 (44%), Gaps = 76/485 (15%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+ +T+++LI G C AG L EA     +M     +P++   N L+    ++G+  +A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 138 IDELDEHGIK--PNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDA 194
                  GI+  P+ +T NI+I  +C+   +DKA ++   ME+N    P+  TY  +I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            CK   +++A ++++         + I + ++    C  +++DEAY LL           
Sbjct: 116 YCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLL----------- 162

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
                                   D ++++   P    +N +I G  ++G+  +A +ML 
Sbjct: 163 -----------------------LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLE 199

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF--KPDIVTCNILLSGLCR 372
            L+  G +P+  T+ T+I GFC  G + +ALQ    +  +    +P++VT N L+SGLC+
Sbjct: 200 TLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCK 259

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              LE A +  +    +    D+ TY TL+  LCK+ R  +   +  EM  +   P   T
Sbjct: 260 ADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVT 319

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP----------------- 475
           Y  +  A  ++G L++AQ+    MV  G      + P+ +                    
Sbjct: 320 YTTLVHAHCKAGSLQDAQQVIRSMVAKG------IPPDVTTYTVLLEGLFENGKVRTATE 373

Query: 476 -------EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                  E   P ++ YS  +   C      +A++ + E   + +A + +T   L+  L 
Sbjct: 374 FFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLC 433

Query: 529 KRRKS 533
           KR ++
Sbjct: 434 KRGRT 438



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 99/195 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VT+N ++  L K  +L    +L+  MK + L  +  TY  L+ G CK G   E  RV
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M +    P V TY  L++  C AG L++A ++ + M +  + PDV TY  L+   FE
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+   A +  +++      P AV ++ +++  CK   +D+A K    M +   +PD  T
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424

Query: 188 YNTLIDANCKAGNME 202
              L++  CK G  +
Sbjct: 425 CKLLVEMLCKRGRTD 439



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 66/127 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VTY T++ A  K G L + + ++  M  +G+ P+ TTY +L+ G  + G ++ A
Sbjct: 312 GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               + + + +  P    Y+ L+ G C A +++EA +   EM   +L PD  T   L+  
Sbjct: 372 TEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEM 431

Query: 125 FFESGRS 131
             + GR+
Sbjct: 432 LCKRGRT 438


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 279/572 (48%), Gaps = 40/572 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLN--EVRDLLSDMKKQGLVPNRTTYNILVSGY--- 55
           M   GC P  V YN  + ++  + KL   ++ DL   +  + L  N     + V+ +   
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262

Query: 56  -CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            C +G   +A +++  M +   +PD  TY+ +I   C+A  +E+AF L +EM+ + + PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TY  LI+ F ++G   +A  L +E+   G  P  VT+  +I  Y K  ++ +A  I  
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM-MDVMG---------------RKGLKM 218
            M + G  P+ VTY  L+D  CKAGN+ +AF +   ++G               R  L  
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N +T   ++  LC   K+D A+ LL++    G   + + Y  LI G+ +  K + A +++
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            +M +   +PS  TY ++I  + + G+ + A+ +L+++L+    P+  T+  +I G C  
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+ EKAL+  + M EK   P++VT   L+ GL + G ++ +L  F     KG + + VTY
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 399 NTLISSLCKERRLEDAFGLLSEMEE----KKLGPDRYTYAAIHTALVES-GRLEEAQKFT 453
             LI+ LC    L+ A  LL EM++    K L   R        + + S G LEE + + 
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYG 682

Query: 454 SIMV------------ETGKINHQV-VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
           ++ +            + G++   + +     + P  +   +  Y+  I   C   + ++
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 742

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           A +++ E  ++G     S ++ L+ GL++ +K
Sbjct: 743 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 247/573 (43%), Gaps = 45/573 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P  VTYN ++  L   G+++    +  +M + G   +R T        CK G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+   D++ +     D      +I+G   A   +EA      M     +P+VVTY T
Sbjct: 91  WADAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +     ++I+ +   G  PN    N ++  YC E     A K++  M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 181 FSPDCVTYNTLIDANCKAGNMEE------AFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             P  V YN  I + C    +        A ++   M      +N + +      LC   
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K D+A+ L+    ++G+  D  +Y  +IT      K  +A  L+ EMK   + P  +TY 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I    ++G  EQA  +  E+   G  P   T+  +IH +    QV +A    ++MV+ 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS----------------VTY 398
             +P+ VT   L+ GLC+ G + KA + +   I    + DS                VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK------- 451
             L+  LCK  +++ A  LL  M      P+   Y A+     ++G+++ AQ+       
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 452 ---------FTSI---MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
                    +TS+   M + G+++   ++  +    +   P+ ++Y+  I+  C  G  +
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLD-LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            AL++     +KG + N  TY  L++GL K  K
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 240/530 (45%), Gaps = 86/530 (16%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+ + V        L   GK ++   L+ +M ++G VP+ +TY+ +++  C    +++A 
Sbjct: 249 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 308

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M      PDV+TY +LI+ +C AG++E+A  L +EM S+   P VVTY  LI+ +
Sbjct: 309 LLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAY 368

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--------- 176
            ++ +  +A  +   + + G +PN VT+  ++   CK G I KA ++   +         
Sbjct: 369 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 428

Query: 177 -------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
                  + +  +P+ VTY  L+D  CKA  ++ A  ++D M   G + N I  + ++  
Sbjct: 429 DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 488

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK------------------- 270
            C   K+D A  +    +K GY     +Y +LI   F+D +                   
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548

Query: 271 ----------------ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
                           + +ALKL   M+E+   P+  TY A+I GL ++GK + ++D+  
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFT 608

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKA---------------LQFHNKMVE---KSF 356
           ++ + G  P+  T+  +I+  C+ G ++KA               LQ +   ++   KSF
Sbjct: 609 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 668

Query: 357 ---------------KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYN 399
                           P      +L+    + G LE A++  +  +    +V  D+  Y 
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 728

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           +LI +LC   ++E+AF L SEM  +   P+   +  +   LVE  + +EA
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 177/407 (43%), Gaps = 27/407 (6%)

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           D L + G +P+ VT+N +++     G++D   ++ + M E+GF  D  T      A CK 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G   +A   +D++ R+  K++T+    ++  L      DEA   L+         + V+Y
Sbjct: 89  GRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TL++G+ + ++     ++ + M      P+   +N+++           A  +LN +  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEK------ALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            G  P    +N  I   C + ++        A + + +M+  +   + V        LC 
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 265

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G  +KA +  +  + KG   D+ TY+ +I+ LC   ++E AF L  EM+   + PD YT
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +  +  ++G +E+AQ     M   G                   P+ ++Y+  I+ +
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVG-----------------CSPTVVTYTALIHAY 368

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
               +   A  IF      G   N  TY  L++GL K   +ISKA +
Sbjct: 369 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK-AGNISKAFE 414



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 21/223 (9%)

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           +  A D  + L   G  P + T+N ++    S GQV+   +   +M E  F  D  T   
Sbjct: 21  SHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGC 80

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
               LC+EG    AL        K   +D+V    +IS L +    ++A   L  M    
Sbjct: 81  FAHALCKEGRWADALDMIEREDFK---LDTVLCTHMISGLMEASYFDEAMSFLHRMRCNS 137

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  TY  + +  ++  +L   ++  ++M+  G        PN S            +
Sbjct: 138 CIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG------CNPNPSL-----------F 180

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
           +  ++ +C++  Y  A ++       G       Y N+  G I
Sbjct: 181 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY-NIFIGSI 222


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 240/516 (46%), Gaps = 22/516 (4%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGL-VPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           T+ ++L    +      +  L + M   G   P   TYN L+   C+   L+ A R + L
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M ++   PD +T+N LI G+C    L+ A  L  +M       D V+Y  LI  F E+GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA +L  EL++    P+  TH  ++K  C   + ++   +++ M+E G+ P    Y  
Sbjct: 215 VDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+D  C+    EEA +M++ M   GL    +T   +++  C E ++  A  +  S   +G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  +Y  ++ G+    K  +A+ L D+M+E  + P   TYN +I G    G  E A 
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L  +  +G+  D+ T+N +I   C  G+V++A    + +  +  +P+ VT N +++GL
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G  + A  F    +  G A D+ TY+  I +LCK +   +    + EM +K + P  
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
             Y  +   L +      A +    MV  G                   P  ++Y+  + 
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVSLG-----------------CSPDVVTYTTSVR 553

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            +C++GR  +A  +  E ++ GI ++   Y  L++G
Sbjct: 554 AYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 235/514 (45%), Gaps = 21/514 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   TYN ++ AL ++  L   +  LS M + G  P+  T+N L+ GYC+   L  A  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D M       D  +Y  LI G+C  G ++EA  L +E+E     PD+ T+  L+    +
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  E   ++ ++ E G +P    +  ++  +C+E K ++A K++  M +NG  P  VT
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
              +++A C+ G M  A R+ + M  KG + N  T N ++   C   K+ +A  LL+   
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D V+Y  LI G   D     A +L   M+   +    +TYN +I  L ++GK +
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  + + L   G+ P+  TFNT+I+G C  G+ + A  F  KMV     PD  T +  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+     + L F    + K     +V Y  +I  L KER    A  +  +M      
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS 542

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY     A    GRL EA+     M + G I               +D  +++Y+ 
Sbjct: 543 PDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGII---------------VD--AMAYNT 585

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
            I+ H S G+   A+ I +         N  T+ 
Sbjct: 586 LIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFF 619



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 256/534 (47%), Gaps = 17/534 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T+N+++    +  +L+  +DL   M  +G   +  +Y  L+ G+C+ G + EA
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEA 218

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   + Q    PD++T+  L+ G C+A   EE   + ++M+ L   P    Y  L++ 
Sbjct: 219 LELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +    ++ EA K+++E+ ++G+ P AVT   ++  YC+EG++  A ++  +M+  G  P+
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPN 334

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN ++   C  G + +A  ++D M   G++ + +T N ++   C +  ++ A+ LL 
Sbjct: 335 VWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLR 394

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D+ +Y  LI    +  K + A  L+D ++ R I P++ T+N +I GL + G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K + A   L +++ +G  PD  T++  I   C      + L F ++M++K  KP  V   
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYT 514

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I++  L +E     A + +   +  G + D VTY T + + C E RL +A  ++ EM++ 
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI-NH-----QVVQPNTSKTPEEI 478
            +  D   Y  +       G+ + A      M     + NH      +      +  E++
Sbjct: 575 GIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDV 634

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              + S  + I          D  ++FE  ++  +  +   Y+ ++ G  + R+
Sbjct: 635 PLKTTSVWKTIE-------LADVFELFELMKKNSVPSSARAYLAILEGFSEERR 681



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 250/546 (45%), Gaps = 33/546 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P    Y  ++D   ++ K  E   +L++M   GLVP   T   +V+ YC+ G 
Sbjct: 256 MKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGR 315

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+RV + M      P+VWTYN ++ G+CN G + +A  L  +M    + PDVVTYN 
Sbjct: 316 MSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNL 375

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G    AF+L+  ++ +G+  +  T+N++I   CK GK+D+AC +   +E  G
Sbjct: 376 LIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NT+I+  CK G  + A   ++ M   G   +T T +  +  LC  K   E  
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             ++   ++      V+Y  +I   F++     A ++W +M      P   TY   +   
Sbjct: 496 SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAY 555

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+  +A +++ E+ + G+I D   +NT+I G  S G+ + A+     M   +  P+ 
Sbjct: 556 CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNH 615

Query: 361 VTCNILLSGLCREGILEKA-LKFFRSW-------------ILKGKAVDSV--TYNTLISS 404
            T  ILL  L +  + E   LK    W             ++K  +V S    Y  ++  
Sbjct: 616 FTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEG 675

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
             +ERRL++   L+S M+E  L  +   Y ++     +     +A      M+  G +  
Sbjct: 676 FSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFL-- 733

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                          P+ ISY   ++   ++G+   A +IF   R K    ++  +  ++
Sbjct: 734 ---------------PNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIII 778

Query: 525 NGLIKR 530
           +GLI++
Sbjct: 779 DGLIRQ 784



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 224/518 (43%), Gaps = 86/518 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  VT   +++A  ++G+++    +   MK +G  PN  TYN +V G+C +G + +A
Sbjct: 295 GLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKA 354

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++D M +    PDV TYN+LI G C  G +E AFRL + ME   L  D  TYN LI+ 
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G+  EA  L D L+  GI+PN+VT N +I   CK GK D AC  +  M   G +PD
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPD 474

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI----------------------- 221
             TY+  I+  CK     E    +D M +K +K +T+                       
Sbjct: 475 TYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWG 534

Query: 222 ------------TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
                       T  T +   C E +L EA  ++    K G  +D ++Y TLI G+    
Sbjct: 535 QMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIG 594

Query: 270 KANRALKLWDEMKERQIMPSTFT------------------------------------- 292
           K + A+ +   M     MP+ FT                                     
Sbjct: 595 KTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELF 654

Query: 293 --------------YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
                         Y A++ G S+  + ++   +++ + +  +  +E  + ++++ FC  
Sbjct: 655 ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKL 714

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
                A      M+   F P++++   LLSG   EG  ++A + FR    K    D + +
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVW 774

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
             +I  L ++   +    ++S +E+ K  P   TYA +
Sbjct: 775 KIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 189/418 (45%), Gaps = 22/418 (5%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIK-PNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           T+ +L+  F     +    +L   +  HG   P   T+N +I+  C+   +  A + +  
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M  +G+ PD  T+N+LI   C+   ++ A  + D M  +G   + ++   ++   C   +
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +DEA  L     +   Y    ++  L+ G     +    L +  +MKE    P+T  Y A
Sbjct: 215 VDEALELFRELEQPDMY----THAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++    +  K E+A  MLNE+  +G++P   T   +++ +C EG++  A++    M  K 
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +P++ T N ++ G C  G + KA+         G   D VTYN LI   C +  +E AF
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            LL  ME   L  D+YTY  +  AL ++G+++EA      +   G               
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG--------------- 435

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             I P+S++++  IN  C  G++  A    E+    G A +  TY   +  L K + S
Sbjct: 436 --IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGS 491



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 138/301 (45%), Gaps = 19/301 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD VTY T + A   +G+L+E  +++ +MKK G++ +   YN L+ G+  +G 
Sbjct: 536 MVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGK 595

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ ++  MT   S+P+ +T+                F L + +   +L  DV    T
Sbjct: 596 TDHAVTILKHMTGVASMPNHFTF----------------FILLRHLLQRRLAEDVPLKTT 639

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            + +  E     + F+L + + ++ +  +A  +  +++ + +E ++D+   +V +M+E+ 
Sbjct: 640 SVWKTIELA---DVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDD 696

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +   Y +L++  CK     +A+ ++  M   G   N I+   +L     E + D A 
Sbjct: 697 LPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAK 756

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      + Y  DE+ +  +I G  R    +    +   +++ +  PS  TY  +   L
Sbjct: 757 EIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816

Query: 301 S 301
           S
Sbjct: 817 S 817


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 239/471 (50%), Gaps = 18/471 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P++  Y  IL  L K G  N ++D+L +MK      +R    I +  Y K    +E + +
Sbjct: 85  PNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCI 144

Query: 68  VDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V++M     L  D   YN L+N   +   L+    +   M S  + PDV T+N LI    
Sbjct: 145 VEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALC 204

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++ +   A  +++E+  +G+ P+  T   +++ + +EG +D A ++   M + G     V
Sbjct: 205 KAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNV 264

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGR----------------KGLKMNTITLNTILHTL 230
           T N L+   CK G +EEA   +D M                  KG + +  T N ++ +L
Sbjct: 265 TVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSL 324

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   KL EA  LL      G   + ++Y TLI G+ +++K   A +++D+M+ + +  ++
Sbjct: 325 CYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNS 384

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            TYN +I GL +S + ++A  ++++++  G+ PD+ T+N+++  FC EG ++KA      
Sbjct: 385 VTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQT 444

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M     +PDIVT   L+ GLC+ G +E A +  RS  LKG  +    YN +I +L K +R
Sbjct: 445 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKR 504

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES-GRLEEAQKFTSIMVETG 460
            ++A  L  EMEEK   PD +TY  +   L  S G + EA  F   M+E G
Sbjct: 505 TKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKG 555



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 226/467 (48%), Gaps = 54/467 (11%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG   D + YN +L+ L    KL  V ++ S M  +G+ P+ +T+NIL+   CK   ++ 
Sbjct: 152 FGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRP 211

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM----------------- 106
           A+ V++ M+    +PD  T+  L+ G+   G ++ AFR++++M                 
Sbjct: 212 AILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVH 271

Query: 107 ---------ESLKLL-------------------------PDVVTYNTLINRFFESGRSM 132
                    E+L  +                         PD  TYN LI+     G+  
Sbjct: 272 GFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQ 331

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L+ E++  G   N +T+N +I  +CK  KI++A +I   ME  G S + VTYNTLI
Sbjct: 332 EALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLI 391

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  CK+  ++EA ++MD M  +GLK +  T N++L   C E  + +A  ++ + +  G  
Sbjct: 392 DGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCE 451

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D V+YGTLI G  +  +   A +L   ++ + ++ +   YN +I  L +  +T++A+ +
Sbjct: 452 PDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRL 511

Query: 313 LNELLQSGMIPDETTFNTIIHGFC-SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
             E+ + G  PD  T+  +  G   S G + +A+ F  +M+EK F P+  +  +L  GLC
Sbjct: 512 FREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
              + +  +K     ++  KA  S     +I    K R+ +DA   L
Sbjct: 572 SLSMEDTLIKLVD--LVMEKANFSQNEVVMIRGFLKIRKFQDALATL 616



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 201/372 (54%), Gaps = 17/372 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G +PD  T+ T++    ++G ++    +   M   G      T N+LV G+CK G 
Sbjct: 219 MSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGR 278

Query: 61  LKEAMRVVDLMT---------------QNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRK 104
           ++EA+  +D M+               +NK   PD +TYNMLI+  C  G L+EA  L +
Sbjct: 279 IEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLR 338

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           EME      +V+TYNTLI+ F ++ +  EA ++ D+++  G+  N+VT+N +I   CK  
Sbjct: 339 EMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSR 398

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           ++ +A +++  M   G  PD  TYN+++   C+ G++++A  ++  M   G + + +T  
Sbjct: 399 RVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYG 458

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
           T++  LC   +++ A  LL S   +G  L   +Y  +I   F+ ++   A++L+ EM+E+
Sbjct: 459 TLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEK 518

Query: 285 QIMPSTFTYNAMIWGLSQS-GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
              P  FTY  +  GLS S G   +A+D + E+++ G +P+ ++F  +  G CS    + 
Sbjct: 519 GNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDT 578

Query: 344 ALQFHNKMVEKS 355
            ++  + ++EK+
Sbjct: 579 LIKLVDLVMEKA 590



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 220/529 (41%), Gaps = 73/529 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEAM 65
           L  N T   +LD L ++        LLS   KQ    PN + Y  ++    K+G      
Sbjct: 48  LSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMK 107

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLINR 124
            ++  M       D     + I+ +    + EE   + + ME    L  D + YN L+N 
Sbjct: 108 DILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNV 167

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  +     KL++ +           H+ M+                      G  PD
Sbjct: 168 LVDGNK----LKLVENV-----------HSTMVS--------------------KGIKPD 192

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N LI A CKA  +  A  +M+ M   GL  +  T  T++     E  +D A+ +  
Sbjct: 193 VSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKE 252

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G  +  V+   L+ G+ ++ +   AL   DEM                   S  G
Sbjct: 253 QMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM-------------------SNEG 293

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K   AI++ NE+   G  PDE T+N +I   C  G++++AL    +M       +++T N
Sbjct: 294 KHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYN 353

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C+   +E+A + F    ++G + +SVTYNTLI  LCK RR+++A  L+ +M  +
Sbjct: 354 TLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIME 413

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD++TY ++ T     G +++A      M   G                  +P  ++
Sbjct: 414 GLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNG-----------------CEPDIVT 456

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           Y   I   C  GR + A ++    + KG+ +    Y  ++  L KR+++
Sbjct: 457 YGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRT 505



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 156/322 (48%), Gaps = 7/322 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD  TYN ++D+L  +GKL E   LL +M+  G   N  TYN L+ G+CK   
Sbjct: 305 MKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKK 364

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA  + D M       +  TYN LI+G C +  ++EA +L  +M    L PD  TYN+
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNS 424

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  F   G   +A  ++  +  +G +P+ VT+  +I   CK G+++ A +++R+++  G
Sbjct: 425 MLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKG 484

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC-CEKKLDEA 239
                  YN +I A  K    +EA R+   M  KG   +  T   +   L      + EA
Sbjct: 485 MVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEA 544

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN--AMI 297
              +    ++G+  +  S+  L  G       +  +KL D + E+    + F+ N   MI
Sbjct: 545 VDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEK----ANFSQNEVVMI 600

Query: 298 WGLSQSGKTEQAIDMLNELLQS 319
            G  +  K + A+  L  LL S
Sbjct: 601 RGFLKIRKFQDALATLGGLLDS 622



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 34/306 (11%)

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G  LD + Y  L+       K      +   M  + I P   T+N +I  L ++ +   A
Sbjct: 153 GLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPA 212

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           I ++ E+   G++PDE TF T++ GF  EG ++ A +   +M++       VT N+L+ G
Sbjct: 213 ILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHG 272

Query: 370 LCREGILEKALKFFRSWILKGKAV----------------DSVTYNTLISSLCKERRLED 413
            C+EG +E+AL F      +GK                  D  TYN LI SLC   +L++
Sbjct: 273 FCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQE 332

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A GLL EME      +  TY  +     ++ ++EEA++    M   G             
Sbjct: 333 ALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQG------------- 379

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
               +  +S++Y+  I+  C   R ++A Q+ ++   +G+  +K TY N M     R   
Sbjct: 380 ----LSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTY-NSMLTYFCREGD 434

Query: 534 ISKAVD 539
           I KA D
Sbjct: 435 IQKAAD 440


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 225/426 (52%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  +T+NT+++ L  +G++ E  + L  +  +G  P   T+ ++V+G CK+G    
Sbjct: 168 LGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSA 227

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +  M +    P+V +Y+++I+  C   ++ EA  L   M S+ + P VVTYN+LI 
Sbjct: 228 AIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIY 287

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               SG+  +A  L  E+ E  +KP+ VT +I++   CKEG + +A  +   M +    P
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTY++LI   CK+   +E+  +++ M  + ++ + +T +  +   C +  + EA  ++
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N   +RG   + V+Y +L+ GY    + + A K++D M  +   P   +YN +I G  +S
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + ++A  + +E+   G+ P+  T  T+I G C  G+   A +   KM      PD++T 
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + LLSG C+ G L++AL  F +        + V    L+  +CK  +LEDA  L S +  
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSI 587

Query: 424 KKLGPD 429
           ++L PD
Sbjct: 588 EELQPD 593



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 232/459 (50%), Gaps = 1/459 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME FG      T   +++ L     +     +L  + K G  P+  T+N L++G C  G 
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EAM  +D +      P V+T+ M++NG C  G    A    K+M  L   P+VV+Y+ 
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   ++    EA  L   +   GI P  VT+N +I   C  G+  +A  + + M E  
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT++ L+DA CK G + EA  +   M +  ++ + +T ++++H +C      E+ 
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESS 369

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN    R    D V++   +  + +    + A  + + M ER + P+  TYN+++ G 
Sbjct: 370 TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGY 429

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               + ++A  + + ++  G  PD  ++N +I G+C   ++++A Q  ++M  K   P+ 
Sbjct: 430 CLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   L+SGLC+ G    A + F+     G   D +TY+TL+S  CK   L++A  L   
Sbjct: 490 ITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEA 549

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVE 458
           +++ +L P+      +   + ++G+LE+A++ F+S+ +E
Sbjct: 550 LKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIE 588



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 241/514 (46%), Gaps = 20/514 (3%)

Query: 22  KKGKLNEVRDLLS---DMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP 78
           K G  +   D L+    M      P  T +N L++   ++      + +   M       
Sbjct: 78  KGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSC 137

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
            V+T  +LIN  C+  ++   F +  ++  L   P ++T+NTLIN     GR +EA + +
Sbjct: 138 SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQL 197

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           D +   G +P   TH +++   CK GK   A   ++ M E    P+ V+Y+ +ID+ CK 
Sbjct: 198 DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
             + EA  +   M   G+    +T N++++ +C   +  +A +L     +     D V++
Sbjct: 258 RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF 317

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             L+    ++     AL ++ +M +  + P   TY+++I G+ +S   +++  +LNE+L 
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
             + PD  TF+  +  FC +G V +A    N M+E+  +P++VT N L+ G C    +++
Sbjct: 378 RNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDE 437

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A K F   + KG A D ++YN LI   CK  R+++A  L  EM  K L P+  T+  + +
Sbjct: 438 ARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLIS 497

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
            L ++GR   A++    M   G                   P  I+YS  ++  C  G  
Sbjct: 498 GLCQAGRPYAAKELFKKMGSHG-----------------CPPDLITYSTLLSGFCKHGHL 540

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +AL +FE  ++  +  N      L+ G+ K  K
Sbjct: 541 DEALALFEALKKSQLKPNHVICKILLGGMCKAGK 574



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 194/355 (54%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ V+Y+ I+D+L K   +NE  DL   M+  G+ P   TYN L+ G C  G  K+A 
Sbjct: 240 CEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQAS 299

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M +    PDV T+++L++  C  G++ EA  +  +M  + + PD+VTY++LI+  
Sbjct: 300 ILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +S    E+  L++E+    I+P+ VT +I +  +CK+G + +A  I+  M E G  P+ 
Sbjct: 360 CKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNV 419

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VTYN+L+D  C    M+EA ++ D+M  KG   + ++ N ++   C  +++DEA  L + 
Sbjct: 420 VTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDE 479

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            S +G   + +++ TLI+G  +  +   A +L+ +M      P   TY+ ++ G  + G 
Sbjct: 480 MSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++A+ +   L +S + P+      ++ G C  G++E A +  + +  +  +PD+
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 176/324 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VTYN+++  +   G+  +   L  +M +  + P+  T++ILV   CK G 
Sbjct: 270 MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGV 329

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ V   M Q    PD+ TY+ LI+G C + + +E+  L  EM S  + PDVVT++ 
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            ++ F + G   EA  +I+ + E G++PN VT+N ++  YC   ++D+A K+   M   G
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD ++YN LI   CK+  ++EA ++ D M  KGL  N+IT  T++  LC   +   A 
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D ++Y TL++G+ +    + AL L++ +K+ Q+ P+      ++ G+
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGM 569

Query: 301 SQSGKTEQAIDMLNELLQSGMIPD 324
            ++GK E A ++ + L    + PD
Sbjct: 570 CKAGKLEDAKELFSSLSIEELQPD 593



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 62/111 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+++T+ T++  L + G+    ++L   M   G  P+  TY+ L+SG+CK G L EA
Sbjct: 484 GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           + + + + +++  P+     +L+ G C AG LE+A  L   +   +L PDV
Sbjct: 544 LALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD +TY+T+L    K G L+E   L   +KK  L PN     IL+ G CK G 
Sbjct: 515 MGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGK 574

Query: 61  LKEAMRVVDLMTQNKSLPDV 80
           L++A  +   ++  +  PDV
Sbjct: 575 LEDAKELFSSLSIEELQPDV 594


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 236/454 (51%), Gaps = 1/454 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P +VTY  ++    ++G   +  +L   M+  GL+P+   +N+++ G       K+A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M  +  +PD +TYN+LI+  C    + EA  L ++M    + P +VTY++L+  
Sbjct: 372 VSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G   EA KL  E+   G  PN VT+  ++K +  +   DKA  ++  M++NG S +
Sbjct: 431 YCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYNTLI+  C  G + E   M+     +G     +T N+I++       +  A+ +  
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   + V+Y + I GY +    + ALK+ ++++ + + P    YN++I+G  Q G
Sbjct: 551 QMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEG 610

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A+ +L  +L+ G++P+ + +N+ I G+ +   +E+AL+F+ KM+++    D  T  
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYT 670

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  ++G +  ALK +   + KG   D +T+  L   LC+   ++DA  LL EM   
Sbjct: 671 TLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL 730

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            + P+   Y  +    + +G+L+EA +    M+E
Sbjct: 731 DIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLE 764



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 218/433 (50%), Gaps = 1/433 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LP    +N ++  L       +   L  +M   G +P+  TYNIL+   C+   
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRK 401

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+ + + M +    P + TY+ L+  +C  G ++EA +L  EM      P+VVTY T
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+          +A+ L+ E+ ++G+  N  T+N +I   C  G++ +  ++++  E  G
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P  +TYN++I+   KAG M  AF +   M  KG+  N +T  + +   C     D A 
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +LN    +G   D  +Y +LI G+ ++   + AL++   M +  ++P+   YN+ I G 
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                 E+A+    ++++ G+  D  T+ T+I GF  +G V  AL+ +++MV K   PD 
Sbjct: 642 KNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDH 701

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   L  GLCR G ++ A K            + + YN LI+   +  +L++AF L  E
Sbjct: 702 ITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDE 761

Query: 421 MEEKKLGPDRYTY 433
           M E+K+ PD  TY
Sbjct: 762 MLERKIMPDDTTY 774



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 190/363 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTY+++L      G ++E   L ++M  +G  PN  TY  L+ G+       +A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M QN    + +TYN LING C  G + E   + K  E+   +P  +TYN++IN 
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G    AF +  ++   GI PN VT+   I  YCK    D A K++ ++   G  PD
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN+LI   C+ GNM  A +++ +M + GL  N    N+ +      K ++EA     
Sbjct: 596 IAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYE 655

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G  LD  +Y TLI G+ +D     ALKL+ EM  +  +P   T+ A+  GL ++G
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNG 715

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + A  +L+E+ +  + P+   +N +I+G+   G++++A + H++M+E+   PD  T +
Sbjct: 716 DIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775

Query: 365 ILL 367
           IL+
Sbjct: 776 ILV 778



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 235/522 (45%), Gaps = 18/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    +  + +L K    N    +L  M+  G VP   T+N +V    K G ++EA+ +
Sbjct: 210 PDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHI 269

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D +        V     L++G+C    + +A  + +E     L+P  VTY  LI    E
Sbjct: 270 KDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTE 329

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A++L  ++ +HG+ P+    N++IK    +     A  + + M ++G  PD  T
Sbjct: 330 EGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFT 388

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI   C+   + EA  + + M   G+K   +T +++L   C    +DEA  L     
Sbjct: 389 YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMP 448

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G+  + V+Y TL+ G+      ++A  L  EMK+  +  + +TYN +I GL   G+  
Sbjct: 449 GKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVC 508

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +  +ML      G +P   T+N+II+GF   G +  A   + +M  K   P+IVT    +
Sbjct: 509 EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+    + ALK       KG   D   YN+LI   C+E  +  A  +L  M +  L 
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLL 628

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+   Y +  T       +EEA +F   M++ G                 ID  + +Y+ 
Sbjct: 629 PNISVYNSFITGYKNLKMMEEALRFYEKMIKEG-----------------IDLDTATYTT 671

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+     G    AL+++ E   KG   +  T+  L +GL +
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 199/396 (50%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  TYN ++  L ++ K+ E  +L   M + G+ P   TY+ L+  YC  G + EA++
Sbjct: 383 IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M      P+V TY  L+ G  N    ++A+ L  EM+   +  +  TYNTLIN   
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC 502

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  E  +++   +  G  P A+T+N +I  + K G +  A  + + M   G  P+ V
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV 562

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY + ID  CK    + A +M++ +  KGL+ +    N++++  C E  +  A  +L   
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLM 622

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G   +   Y + ITGY   +    AL+ +++M +  I   T TY  +I G S+ G  
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNV 682

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A+ + +E++  G IPD  TF  + HG C  G ++ A +  ++M     +P+++  N+L
Sbjct: 683 TFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNML 742

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           ++G  R G L++A +     + +    D  TY+ L+
Sbjct: 743 INGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 201/416 (48%), Gaps = 18/416 (4%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D   ++ ++   F+ G   +A +L DE+    I+P+    ++ I   CK    ++A  ++
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R M++ GF P   T+N+++D   K G MEEA  + D +   G KM+ +   T++H  C +
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           +++ +A  +     + G    +V+Y  LI G   +    +A +L  +M++  ++PST  +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I GL      + A+ +  E+  SG IPD  T+N +IH  C   ++ +AL    KM E
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              KP IVT + LL   C  G +++A+K +     KG   + VTY TL+     +   + 
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A+ LL+EM++  +  + YTY  +   L   GR+ E  +        G +           
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFV----------- 523

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 P++++Y+  IN     G    A  ++++   KGI  N  TY + ++G  K
Sbjct: 524 ------PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 18/356 (5%)

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           +ME  G +PD  +   L+    ++ +  +A  ++  M  KG  ++    + ++     E 
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
             D+A  L +         D+      I    +   ANRAL +  +M++   +P  FT+N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           +++  L + G+ E+A+ + +ELL +G         T++HG+C + +V KAL    + +  
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P  VT  +L+ G   EG+ EKA +  R     G    +  +N +I  L  ++  +DA
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L  EM +  + PD +TY  +   L +  ++ EA      M ETG              
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETG-------------- 416

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              + P  ++Y   +  +C  G   +A++++ E   KG   N  TY  LM G I +
Sbjct: 417 ---VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINK 469



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 18/253 (7%)

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM+ +      + ++ ++    + G  + A+ + +E+  S + PD+   +  I   C   
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
              +AL    KM +  F P   T N ++  L + G +E+AL      +  GK +  V   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           TL+   C +R +  A  +  E     L P   TY  +     E G  E+A +    M + 
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G +                 PS+  ++  I    +   +KDA+ +F+E    GI  +  T
Sbjct: 347 GLL-----------------PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFT 388

Query: 520 YMNLMNGLIKRRK 532
           Y  L++ L +RRK
Sbjct: 389 YNILIHWLCQRRK 401


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 250/526 (47%), Gaps = 17/526 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           E +G LP+    N +L  L ++ + ++ R L  +M  +    +  +  +LV G C  G +
Sbjct: 161 EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRV 220

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +E +++++       +P V  YN+LI+G+C  G +     L  EME+   LP +VTY +L
Sbjct: 221 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSL 280

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           IN   + G   +   L  E+ + G+ PN   +N +I   CK     +A  I++ M  +G 
Sbjct: 281 INCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGC 340

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD +T+NTLI   C  G++ +A   +    R+ L  N ++   ++H  C   +L  A  
Sbjct: 341 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASD 400

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL     RG+  D V++G LI G     K + AL + ++M ERQ+ P    YN +I GL 
Sbjct: 401 LLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 460

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +      A ++L E+L+  + PDE  + T+I GF     +  A +    M  K  +PDIV
Sbjct: 461 KKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIV 520

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           +CN ++ G C+ G++ +A+    +    G   D  TY T+IS   K+  L  A   L +M
Sbjct: 521 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 580

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++K  P+  TY+++     ++G  + A+   + M                   E + P+
Sbjct: 581 IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM-----------------QAEALSPN 623

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++Y+  I     + +   A   FE       + N  T   L+NGL
Sbjct: 624 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 241/546 (44%), Gaps = 19/546 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  + ++T+L  L +  + + V D L  M   G  P R     LV+ Y   G L +A  +
Sbjct: 96  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM 155

Query: 68  VD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            + L  Q  SLP+V   N L+         ++A +L  EM       D  +   L+    
Sbjct: 156 CERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLC 215

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  E  KLI+     G  P+ V +N++I  YC+ G + +   ++  ME  GF P  V
Sbjct: 216 LEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLV 275

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +LI+   K G++E+   +   M ++GL  N    N+++  LC      +A ++L   
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   D +++ TLITG   +    +A     E   R++ P+  +Y  +I G    G+ 
Sbjct: 336 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 395

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A D+L E++  G  PD  TF  +IHG    G+V +AL    KM E+   PD+   N+L
Sbjct: 396 MAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 455

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +SGLC++ +L  A       + K    D   Y TLI    +   L DA  +   ME K +
Sbjct: 456 ISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 515

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV----------QPNTSKT-- 474
            PD  +  A+     + G + EA    S M + G I  +            Q N +    
Sbjct: 516 RPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 575

Query: 475 ------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                   +  P+ ++YS  IN +C  G    A  +F   + + ++ N  TY  L+  L 
Sbjct: 576 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLF 635

Query: 529 KRRKSI 534
           K+ K +
Sbjct: 636 KKDKVL 641



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 50/495 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G LP  VTY ++++ L KKG L ++  L  +M+K+GL PN   YN ++   CK   
Sbjct: 265 MEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWS 324

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG-------MLEEAFR------------ 101
             +AM ++  M  +   PD+ T+N LI G C+ G        L EA R            
Sbjct: 325 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 384

Query: 102 ----------------LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                           L  EM      PDVVT+  LI+    +G+  EA  + +++ E  
Sbjct: 385 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 444

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           + P+   +N++I   CK+  +  A  I+  M E    PD   Y TLID   ++ N+ +A 
Sbjct: 445 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 504

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++ + M  KG++ + ++ N ++   C    + EA + +++  K G   DE +Y T+I+GY
Sbjct: 505 KIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 564

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +    N AL+   +M +R+  P+  TY+++I G  ++G T+ A  +   +    + P+ 
Sbjct: 565 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 624

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL--CREGIL------- 376
            T+  +I     + +V +A  +   M+     P+ VT + L++GL  C   ++       
Sbjct: 625 VTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNT 684

Query: 377 ------EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
                 +  L  F+  +       +  YN +I SLC+   L +A    + M +K   P+ 
Sbjct: 685 SEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNP 744

Query: 431 YTYAAIHTALVESGR 445
            T+ ++       G+
Sbjct: 745 ITFLSLLYGFCSVGK 759



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 50/177 (28%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VTY+++++   K G  +    L ++M+ + L PN  TY IL+    K   +  A 
Sbjct: 585 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 644

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGW----------------------------------- 90
              + M  N   P+  T + L+NG                                    
Sbjct: 645 LYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDI 704

Query: 91  ---------------CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                          C   ML EA   +  M     +P+ +T+ +L+  F   G+SM
Sbjct: 705 GDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSM 761



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 45/98 (45%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P N  YN I+ +L +   L E  D  + M K+G VPN  T+  L+ G+C +G       +
Sbjct: 707 PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTI 766

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           +    Q +    ++ Y  L + +    +  E  R+ ++
Sbjct: 767 LPNEFQQEEFEIIFRYKFLFDQYATESVCCEVSRVLQQ 804


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 256/548 (46%), Gaps = 33/548 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + + V  +     L   GK ++   ++ +M  +G VP+ +TY+ ++   C    
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  + + M +N  +P V+TY +LI+ +C AG++++A +   EM      P+VVTY  
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---- 176
           LI+ + ++ +   A +L + +   G KPN VT+  +I  +CK G+I+KAC+I   M    
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI 595

Query: 177 ------------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
                         N   P+ +TY  L+D  CKA  ++EA  ++D M   G + N I  +
Sbjct: 596 ESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYD 655

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++   C   KL +A  +    S+RGY  +  +Y + I   F+D + +  LK+  +M E 
Sbjct: 656 AVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLEN 715

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+   Y  M+ GL + GKT++A  ++ ++ + G  P+  T+  +I GF   G++E+ 
Sbjct: 716 SCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQC 775

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L+    M  K   P+ +T  +L++  C  G+L++A K              +++  +I  
Sbjct: 776 LELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEG 835

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
             +E     + GLL E+ E +  P    Y  +    +++GRLE A               
Sbjct: 836 FSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLE---------- 883

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                  S +P     +   Y+  I       +   AL+++     K +    S  ++L+
Sbjct: 884 -----EISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLI 938

Query: 525 NGLIKRRK 532
            GLIK  K
Sbjct: 939 KGLIKVDK 946



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 255/579 (44%), Gaps = 56/579 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P   TYN ++    +  KL+    +  +M     V +R T +      CK G 
Sbjct: 202 LKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGK 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA  ++D       +PD   YN +++G C A + EEA  +   M S   +P+VVTY  
Sbjct: 262 CREAFDLID--EAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRI 319

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++     G+     +++  +   G  PN    N +I  YCK      A K+ + M + G
Sbjct: 320 LLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG 379

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK-------GLKMNTITLNTILHTLCCE 233
             P  + YN  I + C +   + +  ++D++ +        G+ +N + ++     LC  
Sbjct: 380 CQPGYLVYNIFIGSVC-SNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGA 438

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K D+A+ ++     +G+  D+ +Y  +I       K  +A  L++EMK   I+PS +TY
Sbjct: 439 GKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY 498

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             +I    ++G  +QA    +E+L  G  P+  T+  +IH +    Q+  A +    M+ 
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLL 558

Query: 354 KSFKPDIVTCNILLSGLCREGILEKAL----------------KFFRSWILKGKAVDSVT 397
           +  KP++VT   L+ G C+ G +EKA                 K+F+      +  + +T
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVIT 618

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y  L+  LCK  R+++A  LL  M      P++  Y A+     + G+L++AQ+  + M 
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678

Query: 458 ETGKINHQVVQPNTSKTPEEID------------------------PSSISYSEKINEHC 493
           E G        PN       ID                        P+ + Y+E ++  C
Sbjct: 679 ERG------YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             G+  +A ++  +  +KG   N  TY  +++G  K  K
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 232/525 (44%), Gaps = 42/525 (8%)

Query: 45  RTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK 104
           R   N LV   C+ GW   A+  +  +      P   TYN LI  +  A  L+ A+ +++
Sbjct: 176 RRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKR 235

Query: 105 EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           EM S   + D  T +       + G+  EAF LIDE ++    P+ V +N M+   C+  
Sbjct: 236 EMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEAS 293

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
             ++A  I+  M  +   P+ VTY  L+    + G +    R++ +M  +G   N    N
Sbjct: 294 LFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFN 353

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA------NRALKLW 278
           +++H  C  +    AY L     K G     + Y   I     +E+       +   K +
Sbjct: 354 SLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAY 413

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            EM +  ++ +    +     L  +GK +QA  ++ E++  G +PD++T++ +I   C  
Sbjct: 414 SEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDA 473

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
            +VEKA     +M      P + T  IL+   C+ G++++A K+F   + KG   + VTY
Sbjct: 474 SKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTY 533

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF------ 452
             LI +  K +++  A  L   M  +   P+  TY A+     ++G++E+A +       
Sbjct: 534 TALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRG 593

Query: 453 ---TSIMVETGKINHQ----------------VVQPNTSKTPEEI---------DPSSIS 484
              +S M +  K++H                 + + N  K   E+         +P+ I 
Sbjct: 594 DIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIV 653

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y   I+  C  G+ +DA ++F +  ++G + N  TY + ++ L K
Sbjct: 654 YDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFK 698



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 199/396 (50%), Gaps = 20/396 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLL---------SDMKKQGLV-------PNRTTY 48
           GC P+ VTY  ++D   K G++ +   +          SDM K   +       PN  TY
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             LV G CK   +KEA  ++D M  +   P+   Y+ +I+G+C  G L++A  +  +M  
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
               P++ TY++ I+  F+  R     K++ ++ E+   PN V +  M+   CK GK D+
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDE 739

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A K++  MEE G +P+ VTY  +ID   K+G +E+   +   M  KG   N IT   +++
Sbjct: 740 AYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLIN 799

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C    LDEAY LL+   +  +    +S+  +I G+   ++   ++ L DE+ E + +P
Sbjct: 800 HCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVP 857

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSG--MIPDETTFNTIIHGFCSEGQVEKALQ 346
               Y  +I    ++G+ E A+D+L E+  S    + ++  + ++I       +V+KAL+
Sbjct: 858 VDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALE 917

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            +  M+ K+  P++     L+ GL +    ++AL+ 
Sbjct: 918 LYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 242/478 (50%), Gaps = 37/478 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V+Y  ++    K G + E    L  M ++G V +  T +++V  +C+ G++  A
Sbjct: 197 GVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRA 256

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +       +    P++  +  +I G C  G +++AF + +EM      P+V T+  LI+ 
Sbjct: 257 LWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDG 316

Query: 125 FFESGRSMEAFKLIDEL---DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
             + G + +AF+L  +L   + H  KPN +T+  MI  YC++ K+++A  ++  M+E G 
Sbjct: 317 LCKKGWTEKAFRLFLKLVRSENH--KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGL 374

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P+  TY TLID +CKAGN E A+ +M+VM  +G   N  T N I+  LC + ++ EAY 
Sbjct: 375 APNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYK 434

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L S  + G   D+V+Y  LI+ + +  +  +AL L+++M +  I P   +Y  +I    
Sbjct: 435 VLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFC 494

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +  + +++     E ++ G++P   T+ ++I G+C EG +  AL+F ++M +     D +
Sbjct: 495 REKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSI 554

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSV------------------------- 396
           T   L+SGLC++  L++A   + + I KG     V                         
Sbjct: 555 TYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERL 614

Query: 397 -------TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
                  T NTL+  LC ER++  A     ++ +K    +R T AA  TA  ES + +
Sbjct: 615 EKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKYD 672



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 236/473 (49%), Gaps = 14/473 (2%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           G++ E  +++ +M  QGL P+  T N +V    ++G ++ A  + D M      P+  +Y
Sbjct: 146 GRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSY 205

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +++ G+C  G + E+ R    M     + D  T + ++  F E G    A        E
Sbjct: 206 RVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCE 265

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G++PN +    MI+  CK G + +A +++  M   G+ P+  T+  LID  CK G  E+
Sbjct: 266 MGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEK 325

Query: 204 AFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+ + ++  +  K N +T   ++   C ++K++ A MLL+   ++G   +  +Y TLI
Sbjct: 326 AFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLI 385

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +     RA +L + M E    P+  TYNA++ GL + G+ ++A  +L    ++G+ 
Sbjct: 386 DGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLD 445

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D+ T+  +I   C + ++++AL   NKMV+   +PDI +   L++  CRE  ++++  F
Sbjct: 446 ADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMF 505

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   +  G    + TY ++I   C+E  L  A      M +     D  TY A+ + L +
Sbjct: 506 FEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCK 565

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE-KINEHCS 494
             +L+EA+     M+E G             TP E+   +++Y   KI++ CS
Sbjct: 566 QSKLDEARCLYDAMIEKG------------LTPCEVTRVTLAYEYCKIDDGCS 606



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 233/474 (49%), Gaps = 18/474 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           +V  + ++G +KEA+ +V  M      P   T N ++      G++E A  L  EM +  
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + P+ V+Y  ++  + + G  +E+ + +  + E G   +  T +++++ +C++G + +A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
              R   E G  P+ + +  +I+  CK G++++AF M++ M  +G K N  T   ++  L
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 231 CCEKKLDEAY-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           C +   ++A+ + L       +  + ++Y  +I+GY RDEK NRA  L   MKE+ + P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           T TY  +I G  ++G  E+A +++N + + G  P+  T+N I+ G C +G+V++A +   
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
                    D VT  IL+S  C++  +++AL  F   +  G   D  +Y TLI+  C+E+
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R++++     E     L P   TY ++       G L  A KF   M + G         
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG--------- 548

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                       SI+Y   I+  C Q +  +A  +++   +KG+   + T + L
Sbjct: 549 --------CASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTL 594



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 207/448 (46%), Gaps = 53/448 (11%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  F E GR  EA +++ E+   G+ P+  T N ++K   + G ++ A  +   M   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+CV+Y  ++   CK GN+ E+ R +  M  +G  ++  TL+ I+   C +  +  A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  + G   + +++  +I G  +     +A ++ +EM  R   P+ +T+ A+I GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 301 SQSGKTEQAIDMLNELLQS------------------------------------GMIPD 324
            + G TE+A  +  +L++S                                    G+ P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+ T+I G C  G  E+A +  N M E+ F P++ T N ++ GLC++G +++A K  +
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S    G   D VTY  LIS  CK+  ++ A  L ++M +  + PD ++Y  +        
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           R++E++ F    V  G +                 P++ +Y+  I  +C +G  + AL+ 
Sbjct: 498 RMKESEMFFEEAVRFGLV-----------------PTNKTYTSMICGYCREGNLRLALKF 540

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           F      G A +  TY  L++GL K+ K
Sbjct: 541 FHRMSDHGCASDSITYGALISGLCKQSK 568


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 222/449 (49%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY T+++A    G +   +  L+ +   GL P+   Y   V GYC+ G L  A RV  LM
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                L   +TY  L++G   AGM+ EA  +   M +    PD   Y T+++   E+GR+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L++E   +G +PN V +N +I  YC  G+++ A K+   M+ N  SP+  TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CK+G +E A  +   M   GL+ N +T   ++   C E  L  A+ LL+     G 
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             ++ ++  LI    + EK   A      + ++ +  +   Y ++I GL ++GK + A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ +++  G +PD  +++++I G C + ++ +A      M+EK  +   VT  I++  L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           RE   E   K F   I  G   D VTY   + S C+E R+EDA  ++ +M ++ + P+  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +       G + +A     +MV  G
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKG 522



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 232/459 (50%), Gaps = 3/459 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCL    TY  +L  L   G + E   +   M+     P+   Y  +V G C+ G  +EA
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++    N   P++  YN LI+G+CNAG +E A ++ + M+  +  P+V TY  LI+ 
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG 256

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SG+   A  L   + E G++PN VT+  +I+  C EG +  A +++  ME NG  P+
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T++ LIDA CK   +EEA   +  + +KG+K+N +   +++  LC   K+D A  L+ 
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+  D  SY +LI G  R +K ++A  + ++M E+ I  S  TY  +I  L +  
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            +E    + ++++ +G+ PD  T+   +  +C EG++E A     +MV++   P++VT N
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G    G++ +A   F   + KG   +  +Y  L+  + K+   +++  +    + K
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556

Query: 425 KLGPDRY---TYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L    Y    +  +   L++ G + E     S+M E G
Sbjct: 557 DLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHG 595



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 236/527 (44%), Gaps = 21/527 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP     NT+L AL +     ++  L S M  +    N  TY  L++ YC  G +  A +
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  +      PD + Y   + G+C AGML  A R+   M     L    TY  L++   
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +G   EA  +   +      P+   +  M+   C+ G+ ++A  ++     NGF P+ V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LID  C AG ME A ++ + M       N  T   ++H LC   K++ A +L +  
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   + V+Y  LI G   +     A +L   M+   ++P+ +T++ +I  L +  K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A   L  L++ G+  +E  + ++I G C  G+++ A +   KM+ + F PD  + + L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLCR+  L +A       + KG     VTY  +I  L +E   E    +  +M    +
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY     +  E GR+E+A+     MV+ G                 + P+ ++Y+
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG-----------------VFPNLVTYN 496

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             I  + + G    A   FE    KG   N+ +Y  L+  ++K+  S
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 223/454 (49%), Gaps = 3/454 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C PD   Y T++  L + G+  E   LL +    G  PN   YN L+ GYC  G 
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A++V + M  N+  P+V TY  LI+G C +G +E A  L   M    L P+VVTY  
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G    AF+L+  ++ +G+ PN  T +++I   CK  K+++A   + ++ + G
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + V Y +LID  CK G ++ A  +M  M  +G   +  + ++++  LC +KKL +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++L    ++G     V+Y  +I    R+  +    K++D+M    I P   TY   +   
Sbjct: 408 LMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSY 467

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E A  M+ +++  G+ P+  T+NT+I G+ + G V +A      MV K +KP+ 
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKG---KAVDSVTYNTLISSLCKERRLEDAFGL 417
            +  +LL  + ++   + ++  ++   +K       D + +  LI  L ++  + +   L
Sbjct: 528 DSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSL 587

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           LS M+E    P     A I   +  +  ++E  +
Sbjct: 588 LSVMKEHGYQPSNTINAMITGEITVTNEVQEIAR 621


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 233/474 (49%), Gaps = 33/474 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+ ++  ++   F+ GK+ E    LS M ++G +P+  T  +++S  C+ G +  A
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M      P++  +  LI+G C  G +++AF + +EM      P+V T+  LI+ 
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354

Query: 125 FFESGRSMEAFKLIDELDEHGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G + +AF+L  +L    I KPN  T+  MI  YCKE K+++A  +   M+E G  P
Sbjct: 355 LCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 414

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLI+ +CKAGN + A+ +M++M  +G + N  T N ++ +LC + +  EAY LL
Sbjct: 415 NVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELL 474

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N A   G   D V+Y  LI    +     +AL  +  M +          N +I    + 
Sbjct: 475 NKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 534

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K +++  +   ++  G++P + T+ ++I G+C EG  + AL++ + M      PD  T 
Sbjct: 535 KKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTY 594

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSV--------------------------- 396
             L+SGLC++ ++++A K + + I +G +   V                           
Sbjct: 595 GSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDK 654

Query: 397 -----TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                T  TL+  LC E+++  A     ++ EK    DR T AA  TA  ESG+
Sbjct: 655 KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 708



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 240/489 (49%), Gaps = 18/489 (3%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           G+LNE   ++ DM+ QGL P+  T N ++    + G +  A  V D M+     PD  ++
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +++ G    G ++EA R    M     +PD  T   +++   E+G    A     ++ +
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G KPN +    +I   CK+G I +A +++  M  NG+ P+  T+  LID  CK G  E+
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 204 AFRMMDVMGRKGL-KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+   + R  + K N  T  +++   C E KL+ A ML +   ++G + +  +Y TLI
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +    +RA +L + M +    P+ +TYNA+I  L +  +  +A ++LN+    G+ 
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D  T+  +I   C +  +++AL F  +M +  F+ D+   NIL++  CR+  ++++ + 
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 543

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F+  +  G      TY ++IS  CKE   + A      M+     PD +TY ++ + L +
Sbjct: 544 FQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 603

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
              ++EA K    M++ G             +P E+   +++Y     E+C +     A+
Sbjct: 604 KSMVDEACKLYEAMIDRG------------LSPPEVTRVTLAY-----EYCKRNDSASAM 646

Query: 503 QIFEETRQK 511
            + E   +K
Sbjct: 647 IVLEPLDKK 655



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 237/490 (48%), Gaps = 20/490 (4%)

Query: 51  LVSGYCKLGWLKEAM-RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
           ++  + ++G L EA+  V+D+  Q  S P   T N ++     +G+++ A  +  EM   
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLS-PSSITMNCVLEIAIESGLIDYAENVFDEMSVR 234

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
            + PD  ++  ++   F  G+  EA + +  + + G  P+  T  +++   C+ G +++A
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
               R M + GF P+ + + +LID  CK G++++AF M++ M R G K N  T   ++  
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           LC     ++A+ L     +   Y   V +Y ++I GY +++K NRA  L+  MKE+ + P
Sbjct: 355 LCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 414

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           +  TY  +I G  ++G  ++A +++N +   G  P+  T+N +I   C + +  +A +  
Sbjct: 415 NVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELL 474

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           NK      + D VT  IL+   C++  +++AL FF      G   D    N LI++ C++
Sbjct: 475 NKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 534

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           ++++++  L   +    L P + TY ++ +   + G  + A K+   M   G +      
Sbjct: 535 KKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCV------ 588

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P S +Y   I+  C +    +A +++E    +G++  + T + L     
Sbjct: 589 -----------PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 637

Query: 529 KRRKSISKAV 538
           KR  S S  +
Sbjct: 638 KRNDSASAMI 647



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 129/264 (48%), Gaps = 3/264 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+  TYN ++D+L KK +  E  +LL+     GL  +  TY IL+   CK   
Sbjct: 442 MDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSD 501

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A+     M +     D+   N+LI  +C    ++E+ RL + + SL L+P   TY +
Sbjct: 502 IKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTS 561

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + + G    A K    +  HG  P++ T+  +I   CK+  +D+ACK+   M + G
Sbjct: 562 MISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 621

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VT  TL    CK  +   A  +++ + +   K+   T+ T++  LC EKK+  A 
Sbjct: 622 LSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAA 678

Query: 241 MLLNSASKRGYYLDEVSYGTLITG 264
           +      ++    D V+     T 
Sbjct: 679 LFFQKLLEKDSSADRVTLAAFTTA 702


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 250/525 (47%), Gaps = 21/525 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC  +   Y  ++  L K+G++++ R LL +M  +G+VP+  TYN ++ GYCK G +K+A
Sbjct: 279 GCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 338

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +  LM QN   PD WTYN LI G C  G L+EA  L     +    P V+T+  LIN 
Sbjct: 339 LGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLING 397

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++ R  +A ++   +     K +   + ++I    K+ ++ +A + +  M  NG +P+
Sbjct: 398 YCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPN 457

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y ++ID  CK G +  A  +  +M  +G   N  T  ++++ L  +KKL +A  L+ 
Sbjct: 458 VVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G     ++Y TLI G  +  + + A +L++ M++  + P    YN +   L +SG
Sbjct: 518 KMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG 577

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A      L++ G++  + T+ +++ GF   G  + A     KMV +  K D+ T +
Sbjct: 578 RAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           +LL  LC++  L +AL       + G   + V Y  +IS + KE + + A  L +EM   
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P   TY    ++  + G++EEA+     M   G                 + P  ++
Sbjct: 695 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG-----------------VTPDVVT 737

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y   IN     G    A    +         N  TY  L+   +K
Sbjct: 738 YHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 249/538 (46%), Gaps = 22/538 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN  L +L +      +  L S + ++GL+P+  TYN ++  YCK G L  A R   L+ 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           ++    D +T N L+ G+C    L +A  L   M  +    +  +Y  LI   +E+    
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA  L+  + + G   N   + ++IK  CKEG+I  A  ++  M   G  P   TYN +I
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  CK+G M++A  +  +M + G   +  T N++++ L C  KLDEA  LLN A  RG+ 
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL-CGGKLDEAEELLNGAIARGFT 385

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
              +++  LI GY + E+ + AL++   M           Y  +I  L +  + ++A + 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           LNE+  +G+ P+   + +II G+C  G V  AL+    M  +   P+  T   L+ GL +
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +  L KA+         G     + Y TLI   CK+   ++AF L   ME+  L PD   
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQA 565

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQPNTSKTP------------- 475
           Y  +  AL +SGR EEA  F   +V  G    K+ +  +    SK               
Sbjct: 566 YNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622

Query: 476 -EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            E       +YS  +   C Q +  +AL I ++    G+  N   Y  +++ +IK  K
Sbjct: 623 NEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 246/526 (46%), Gaps = 21/526 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  +  +Y  ++  L++   + E   L+  M + G   N   Y +L+ G CK G 
Sbjct: 240 MPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGR 299

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  ++D M     +P VWTYN +I+G+C +G +++A  ++  ME     PD  TYN+
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G+  EA +L++     G  P  +T   +I  YCK  +ID A ++  NM  + 
Sbjct: 360 LIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN 418

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   Y  LI+   K   ++EA   ++ M   GL  N +   +I+   C    +  A 
Sbjct: 419 CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAAL 478

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G + +  +YG+LI G  +D+K ++A+ L  +M+E  I P    Y  +I G 
Sbjct: 479 EVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQ 538

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + + A  +   + ++G+ PDE  +N +    C  G+ E+A  F   +V K      
Sbjct: 539 CKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTK 595

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT   L+ G  + G  + A       + +G   D  TY+ L+ +LCK+++L +A  +L +
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M    +  +   Y  I + +++ G+ + A+   + M+ +G                   P
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH-----------------KP 698

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           S+ +Y+  I+ +C  G+ ++A  +  E  + G+  +  TY   +NG
Sbjct: 699 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFING 744



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 249/524 (47%), Gaps = 5/524 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC PD+ TYN+++  L   GKL+E  +LL+    +G  P   T+  L++GYCK   
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+RV   M  +    D+  Y +LIN       L+EA     EM +  L P+VV Y +
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + + G    A ++   ++  G  PNA T+  +I    ++ K+ KA  ++  M+E+G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P  + Y TLI   CK    + AFR+ ++M + GL  +    N +   LC   + +EAY
Sbjct: 524 ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAY 583

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L    ++G  L +V+Y +L+ G+ +    + A  L ++M         +TY+ ++  L
Sbjct: 584 SFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K  +A+ +L+++  SG+  +   +  II     EG+ + A    N+M+    KP  
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSA 700

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T  + +S  C+ G +E+A          G   D VTY+  I+       ++ AF  L  
Sbjct: 701 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR 760

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +    P+ +TY  +    ++   +      TS M    ++N  V Q         ++P
Sbjct: 761 MVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELN-TVWQLLERMMKHGLNP 819

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
           + ++YS  I   C   R ++A  + +    K I+ N+  Y  L+
Sbjct: 820 TVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 203/416 (48%), Gaps = 19/416 (4%)

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           KL   L + G+ P+ VT+N MI  YCK+G +  A +    + E+G   D  T N L+   
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           C+  ++ +A  ++ +M   G + N  +   ++  L   + + EA +L+    + G  L+ 
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
             Y  LI G  ++ + + A  L DEM  R ++PS +TYNAMI G  +SG+ + A+ +   
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           + Q+G  PD+ T+N++I+G C  G++++A +  N  + + F P ++T   L++G C+   
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
           ++ AL+   + I     +D   Y  LI+ L K+ RL++A   L+EM    L P+   Y +
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463

Query: 436 IHTALVESGRLEEAQKFTSIMVETG------------------KINHQVVQPNTSKTPEE 477
           I     + G +  A +   +M   G                  K  H+ +   T    + 
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           I P  I+Y+  I   C +  + +A ++FE   + G+  ++  Y  L + L K  ++
Sbjct: 524 ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRA 579



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 204/443 (46%), Gaps = 22/443 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD   YN + DAL K G+  E    L    ++G+V  + TY  LV G+ K G 
Sbjct: 554 MEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGN 610

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A  +++ M       D++TY++L+   C    L EA  +  +M    +  ++V Y  
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + G+   A  L +E+   G KP+A T+ + I  YCK G+I++A  ++  ME +G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 730

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY+  I+     G M+ AF  +  M     + N  T   +L             
Sbjct: 731 VTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHF---------- 780

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L  +    +Y+D        +G +   + N   +L + M +  + P+  TY+++I G 
Sbjct: 781 --LKMSLINAHYIDT-------SGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGF 831

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + E+A  +L+ +L   + P+E  +  +I   C      K + F   M+E  F+P +
Sbjct: 832 CKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQL 891

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + + L+ GLC EG  ++A   F   +      + V +  L   L K   ++    LL+ 
Sbjct: 892 ESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAA 951

Query: 421 MEEKKLGPDRYTYAAIHTALVES 443
           M+ +    D  +Y+ +  ++ E+
Sbjct: 952 MDNRHCRIDSESYSMLTDSIREA 974


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 268/560 (47%), Gaps = 57/560 (10%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK- 62
           FG   + ++ N +L+   +  +   +R L  ++K  G  PN  TY I+++ YCK  + K 
Sbjct: 207 FGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKN 266

Query: 63  ----EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
               +A  V++ M  N   P V TY   I+G C AG +E A RL +++       +   Y
Sbjct: 267 IDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCY 326

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N +I+ F  +G   EAF+L++++  HGI P A +++I+I   CK+G+++KA  ++  M +
Sbjct: 327 NAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQ 386

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +   P  VTY++L D  CK+G  E +  M   +G +G K + I+ NT+++    ++ +  
Sbjct: 387 SNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGS 446

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR------------------------- 273
           A  L++     G   +  ++  LI G+ + ++ ++                         
Sbjct: 447 ACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMAD 506

Query: 274 ----------ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
                     ALKL +E+++  I+P+++TYN +I  L +  KTE+A ++L  +L++ + P
Sbjct: 507 EFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFP 566

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
               +NT+I G+  +    KAL  + KM++    P IVT  +L++       +++A   F
Sbjct: 567 CAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLF 626

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +  I KG   D + +  +I+  CK   ++ A+ L  EM +    P+  TY  +     + 
Sbjct: 627 KEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKI 686

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            R+++A    + M                   + + P  ++Y+  I  + S G      +
Sbjct: 687 KRMDKADFLFNKMKR-----------------DNVTPDGLTYTALIFGYQSLGYSDRVRE 729

Query: 504 IFEETRQKGIAINKSTYMNL 523
           +F E ++ G+  N + Y  L
Sbjct: 730 MFNEMKENGVFPNYTAYATL 749



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 224/451 (49%), Gaps = 3/451 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P  VTY   +  L + G +     L+ D++ +    N   YN ++  +C+ G 
Sbjct: 279 MEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGE 338

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +++ M  +   P  ++Y++LI+G C  G +E+A  L +EM    + P +VTY++
Sbjct: 339 LHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSS 398

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L +   +SG +  +  +   L   G K + +++N +I  +  +  +  ACK+V  M  NG
Sbjct: 399 LFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNG 458

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  T+N LI   CK   +++A  +  +M + G+++N  T N +      E    EA 
Sbjct: 459 SVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEAL 518

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+N     G   +  +Y  +I    +++K  +A ++   M +  + P    YN +I G 
Sbjct: 519 KLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGY 578

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++     +A+ +  ++L+ G+ P   T+  +I+ F +  ++++A     +M++K   PD 
Sbjct: 579 AKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDE 638

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +    +++G C+ G ++ A   +      GK+ + VTY  LI    K +R++ A  L ++
Sbjct: 639 IIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNK 698

Query: 421 MEEKKLGPDRYTYAAI---HTALVESGRLEE 448
           M+   + PD  TY A+   + +L  S R+ E
Sbjct: 699 MKRDNVTPDGLTYTALIFGYQSLGYSDRVRE 729



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 227/486 (46%), Gaps = 57/486 (11%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N+LI  +    ML +A  +  +     L  ++++ N L+N F E+ ++     L +EL +
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 144 HGIKPNAVTHNIMIKWYCKE--GK---IDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            G  PN  T+ IM+ +YCK   GK   I KA +++  ME NG SP  VTY   I   C+A
Sbjct: 242 SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G +E A R++  +  +   +N+   N ++H  C   +L EA+ LL      G      SY
Sbjct: 302 GCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSY 361

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM------ 312
             LI G  +  +  +AL L +EM +  + PS  TY+++  GL +SG TE ++ M      
Sbjct: 362 SILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGA 421

Query: 313 -----------------------------LNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
                                        ++E+  +G +P+  TFN +IHGFC   +++K
Sbjct: 422 EGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDK 481

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           AL+    M++   + +I TCNI+     REG   +ALK        G   +S TYN +I 
Sbjct: 482 ALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIK 541

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            LCKE++ E A+ +L  M +  + P    Y  +     +     +A    + M++ G   
Sbjct: 542 WLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVG--- 598

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I PS ++Y+  IN   ++ + ++A  +F+E  +KG+  ++  +  +
Sbjct: 599 --------------IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCI 644

Query: 524 MNGLIK 529
           + G  K
Sbjct: 645 IAGFCK 650



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 227/507 (44%), Gaps = 50/507 (9%)

Query: 37  KKQGLVPNRTTYNILVSGYCKLGW-LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           +K+GL P       +++ +  L W L         ++ +     ++ + ++I+   +AG+
Sbjct: 83  RKRGLFP------FVLTVFKTLNWKLATHTNFFKAVSFHGFSHSIYAFKIIIHVLASAGL 136

Query: 96  LEEAFRLRKEMESLKLLPDVVTY----NTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
                    +ME    L D+++Y    N  ++  F +        L+D   +  +  + +
Sbjct: 137 ---------QMEVQIFLRDIISYYKEVNLDVSELFST--------LLDSPQDAHMGGSII 179

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             N++IK + +   +  A  +       G   + ++ N L++   +A   E    + + +
Sbjct: 180 VANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEEL 239

Query: 212 GRKGLKMNTITLNTILHTLC---CEKKLD--EAYMLLNSASKRGYYLDEVSYGTLITGYF 266
              G   N  T   +++  C     K +D  +A  +L      G     V+YG  I G  
Sbjct: 240 KDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLC 299

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R      AL+L  +++ R    +++ YNA+I    ++G+  +A ++L ++   G+ P   
Sbjct: 300 RAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAY 359

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           +++ +I G C +GQVEKAL    +MV+ + KP +VT + L  GLC+ G+ E +L  F + 
Sbjct: 360 SYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNL 419

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             +G   D ++YNTLI+    +R +  A  L+ EM      P+ +T+  +     +  RL
Sbjct: 420 GAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRL 479

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           ++A +  +IM++ G      VQ N        D           E   +G + +AL++  
Sbjct: 480 DKALEVFTIMLKVG------VQLNIFTCNIMAD-----------EFNREGHFWEALKLIN 522

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKS 533
           E +  GI  N  TY  ++  L K +K+
Sbjct: 523 EVQDLGIVPNSYTYNIVIKWLCKEQKT 549



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 1/229 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++  G +P++ TYN ++  L K+ K  +  ++L  M K  + P    YN L+ GY K   
Sbjct: 524 VQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSN 583

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ +   M +    P + TY MLIN + N   ++EA+ L KEM    L+PD + +  
Sbjct: 584 PTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTC 643

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I  F + G    A+ L +E+ + G  PN VT+  +I  Y K  ++DKA  +   M+ + 
Sbjct: 644 IIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDN 703

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI-LH 228
            +PD +TY  LI      G  +    M + M   G+  N     T+ LH
Sbjct: 704 VTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLGLH 752


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 222/449 (49%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY T+++A    G +   +  L+ +   GL P+   Y   V GYC+ G L  A RV  LM
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                L   +TY  L++G   AGM+ EA  +   M +    PD   Y T+++   E+GR+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA  L++E   +G +PN V +N +I  YC  G+++ A K+   M+ N  SP+  TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   CK+G +E A  +   M   GL+ N +T   ++   C E  L  A+ LL+     G 
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             ++ ++  LI    + EK   A      + ++ +  +   Y ++I GL ++GK + A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ +++  G +PD  +++++I G C + ++ +A      M+EK  +   VT  I++  L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           RE   E   K F   I  G   D VTY   + S C+E R+EDA  ++ +M ++ + P+  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETG 460
           TY  +       G + +A     +MV  G
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKG 522



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 232/460 (50%), Gaps = 12/460 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCL    TY  +L  L   G + E   +   M+     P+   Y  +V G C+ G  +EA
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++    N   P++  YN LI+G+CNAG +E A ++ + M+  +  P+V TY  LI+ 
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG 256

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +SG+   A  L   + E G++PN VT+  +I+  C EG +  A +++  ME NG  P+
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T++ LIDA CK   +EEA   +  + +KG+K+N +   +++  LC   K+D A  L+ 
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+  D  SY +LI G  R +K ++A  + ++M E+ I  S  TY  +I  L +  
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            +E    + ++++ +G+ PD  T+   +  +C EG++E A     +MV++   P++VT N
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR------------LE 412
            L+ G    G++ +A   F   + KG   +  +Y  L+  + K+              ++
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
           D   LL ++ E++L      Y+     L    RLEEA+ F
Sbjct: 557 DLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHF 596



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 236/527 (44%), Gaps = 21/527 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP     NT+L AL +     ++  L S M  +    N  TY  L++ YC  G +  A +
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  +      PD + Y   + G+C AGML  A R+   M     L    TY  L++   
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +G   EA  +   +      P+   +  M+   C+ G+ ++A  ++     NGF P+ V
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN LID  C AG ME A ++ + M       N  T   ++H LC   K++ A +L +  
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   + V+Y  LI G   +     A +L   M+   ++P+ +T++ +I  L +  K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+A   L  L++ G+  +E  + ++I G C  G+++ A +   KM+ + F PD  + + L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLCR+  L +A       + KG     VTY  +I  L +E   E    +  +M    +
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY     +  E GR+E+A+     MV+ G                 + P+ ++Y+
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG-----------------VFPNLVTYN 496

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             I  + + G    A   FE    KG   N+ +Y  L+  ++K+  S
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 220/448 (49%), Gaps = 12/448 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C PD   Y T++  L + G+  E   LL +    G  PN   YN L+ GYC  G 
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A++V + M  N+  P+V TY  LI+G C +G +E A  L   M    L P+VVTY  
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      G    AF+L+  ++ +G+ PN  T +++I   CK  K+++A   + ++ + G
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + V Y +LID  CK G ++ A  +M  M  +G   +  + ++++  LC +KKL +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++L    ++G     V+Y  +I    R+  +    K++D+M    I P   TY   +   
Sbjct: 408 LMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSY 467

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ E A  M+ +++  G+ P+  T+NT+I G+ + G V +A      MV K +KP+ 
Sbjct: 468 CEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVT----------YNTLISSLCKE 408
            +  +LL  + ++   + ++  ++   +K   V  + +T          Y+  I  LC+ 
Sbjct: 528 DSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRV 587

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            RLE+A      M+   L P    Y +I
Sbjct: 588 DRLEEAKHFFMGMQNANLTPSEDVYTSI 615


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 262/531 (49%), Gaps = 20/531 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD VTY  ++DAL   G+L   ++L   MK  G  P++  Y  L+  +   G 
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L         M  +  +PDV T+ +L++  C A   +EAF     M    +LP++ TYNT
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI     +GR  +A KL+  ++  G++P A T+NI I ++ K G+  KA +    M+  G
Sbjct: 408 LICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG 467

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V  N  + +  + G + EA  M + +   GL  +++T N ++       ++DEA 
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   + G   D +   +LI   ++  + + A +++D MK+ ++ P+  TYN ++ GL
Sbjct: 528 NLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL 587

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ ++AI++   +++    P+  +FNT++  FC   +VE AL+  +KM     KPD+
Sbjct: 588 GKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDV 647

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++ GL +E  +  A  FF   + K    D VT  TL+  L K  ++ DA  +  +
Sbjct: 648 LTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARD 706

Query: 421 -MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M + +   +R  +  +    +    +++A  F   +V  G     + + ++   P    
Sbjct: 707 FMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG-----ICREDSFLIP---- 757

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGLIK 529
                    +   C   R   A QIF++ T++ GI+   ++Y  L+  L++
Sbjct: 758 --------LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLE 800



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 250/521 (47%), Gaps = 17/521 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY TI  AL  +G L ++  +L+ M+K G V N  +YN L+    + G+  EA+ V   M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + TY+ L+         E    L KEME L L P+V T+   I     +G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA+++   +D+ G  P+ VT+ ++I   C  G+++ A ++   M+ NG  PD V Y TL
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D     G+++        M   G   + +T   ++  LC  +  DEA+   +   K+G 
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y TLI G  R  +   ALKL   M+   + P+ +TYN  I    +SG+T +A++
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
              ++   G++P+    N  ++     G++ +A    N + E    PD VT N+++    
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G +++A+      I  G   D +  N+LI SL K  R+++A+ +   M++ KL P   
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  + + L + GR+++A +    M+E                 ++  P++IS++  ++ 
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIE-----------------KKCSPNTISFNTLLDC 621

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C     + AL++F +        +  TY  ++ GLIK  K
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 221/449 (49%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T+   +  L + GK++E  ++   M  +G  P+  TY +L+   C  G 
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +   M  N   PD   Y  L++ + + G L+       +ME+   +PDVVT+  
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++    EAF   D + + GI PN  T+N +I    + G+I+ A K++  ME  G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TYN  ID   K+G   +A    + M  KG+  N +  N  L++L    +L EA 
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N   + G   D V+Y  ++  Y +  + + A+ L  EM      P     N++I  L
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ ++A  M + +    + P   T+NT++ G   EG+V+KA++    M+EK   P+ 
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++ N LL   C+   +E ALK F    +     D +TYNT+I  L KE ++  AF    +
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           + +K + PD  T   +   LV+ G++ +A
Sbjct: 673 L-KKSMHPDHVTICTLLPGLVKCGQIGDA 700



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 264/532 (49%), Gaps = 24/532 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G + +  +YN ++  L + G   E  ++   M  +GL P+  TY+ L+     LG 
Sbjct: 183 MRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVA---LGK 239

Query: 61  LKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
            +++  V+ L+ + + L   P+V+T+ + I     AG ++EA+ + + M+     PD+VT
Sbjct: 240 KRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVT 299

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  LI+    +G+   A +L  ++  +G KP+ V +  ++  +   G +D   +    ME
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQME 359

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
            +G+ PD VT+  L+D  CKA + +EAF   DVM ++G+  N  T NT++  L    +++
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL +    G      +Y   I  + +  +  +A++ +++MK + I+P+    NA +
Sbjct: 420 DALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL 479

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           + L++ G+  +A  M N L ++G+ PD  T+N ++  +   GQV++A+   ++M+    +
Sbjct: 480 YSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE 539

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD++  N L+  L + G +++A + F        +   VTYNTL+S L KE R++ A  L
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
              M EKK  P+  ++  +     ++  +E A K  S M                 T  +
Sbjct: 600 FESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM-----------------TVMD 642

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             P  ++Y+  I     + +   A   F + + K +  +  T   L+ GL+K
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVK 693



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 262/569 (46%), Gaps = 55/569 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G +P+ V  N  L +L + G+L E + + + +++ GL P+  TYN+++  Y K+G 
Sbjct: 463  MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + EA+ ++  M +N   PDV   N LI+    AG ++EA+++   M+ +KL P VVTYNT
Sbjct: 523  VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L++   + GR  +A +L + + E    PN ++ N ++  +CK  +++ A K+   M    
Sbjct: 583  LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--------- 231
              PD +TYNT+I    K   +  AF     + +K +  + +T+ T+L  L          
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 232  ---------------------------CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
                                        E ++D+A +        G   ++     L+  
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 265  YFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              + ++   A +++D+  K+  I P+  +YN +I  L +   TE+A D+  ++   G  P
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            D  TFN ++      G++ +  + + +M+ +  KPD +T NI++S L +   L+KAL FF
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               +         TY  LI  L K  RLE+A  L  EM +    P+   +  +     + 
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 444  GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            G  E A +    MV  G                 I P   SY+  ++  C  GR  +AL 
Sbjct: 942  GDTETACQLFKRMVNEG-----------------IRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 504  IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             F E +  G+  +   Y  ++NGL K ++
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQR 1013



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 243/559 (43%), Gaps = 63/559 (11%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  VTYNT+L  L K+G++ +  +L   M ++   PN  ++N L+  +CK   ++ A+++
Sbjct: 575  PTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKM 634

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF----RLRKEMESLKLLPDVVTYNTLIN 123
               MT     PDV TYN +I G      +  AF    +L+K M      PD VT  TL+ 
Sbjct: 635  FSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH-----PDHVTICTLLP 689

Query: 124  RFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKA------------- 169
               + G+  +A  +  D + +   + N      ++     E ++DKA             
Sbjct: 690  GLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGIC 749

Query: 170  -------------CKIVRNM----------EENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                         CK  R +          ++ G SP   +YN LI    +    E+A+ 
Sbjct: 750  REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD 809

Query: 207  MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            +   M   G   +  T N +L       K+ E + L      R    D ++Y  +I+   
Sbjct: 810  LFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869

Query: 267  RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
            +    ++AL  + ++      P+  TY  +I GL++ G+ E+A+ +  E+   G  P+  
Sbjct: 870  KSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCA 929

Query: 327  TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
             FN +I+G+   G  E A Q   +MV +  +PD+ +  IL+  LC  G +++AL +F   
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 387  ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
               G   D + YN +I+ L K +R+E+A  L +EM  + + PD YTY ++   L  +G +
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 447  EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
            E+A++    +   G                 ++P   +Y+  I  +      + A  +++
Sbjct: 1050 EQAKRMYEELQLAG-----------------LEPDVFTYNALIRGYSLSENPEHAYTVYK 1092

Query: 507  ETRQKGIAINKSTYMNLMN 525
                 G   N  TY  L N
Sbjct: 1093 NMMVDGCNPNIGTYAQLPN 1111



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 159/325 (48%)

Query: 4    FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
             G  P   +YN ++  L +     +  DL  DMK  G  P+  T+N+L++ + K G + E
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 64   AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
               +   M   +  PD  TYN++I+    +  L++A     ++ S    P   TY  LI+
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 124  RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + GR  EA +L +E+ ++G KPN    NI+I  Y K G  + AC++ + M   G  P
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961

Query: 184  DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            D  +Y  L+D  C AG ++EA    + +   GL  + I  N I++ L   ++++EA  L 
Sbjct: 962  DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021

Query: 244  NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            N    RG   D  +Y +L+          +A ++++E++   + P  FTYNA+I G S S
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081

Query: 304  GKTEQAIDMLNELLQSGMIPDETTF 328
               E A  +   ++  G  P+  T+
Sbjct: 1082 ENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 139/293 (47%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  GC PD  T+N +L    K GK+ E+ +L  +M  +   P+  TYNI++S   K   
Sbjct: 814  MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L +A+     +  +   P   TY  LI+G    G LEEA RL +EM      P+   +N 
Sbjct: 874  LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LIN + + G +  A +L   +   GI+P+  ++ I++   C  G++D+A      ++  G
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD + YN +I+   K+  MEEA  + + M  +G+  +  T N+++  L     +++A 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
             +       G   D  +Y  LI GY   E    A  ++  M      P+  TY
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 157/365 (43%), Gaps = 17/365 (4%)

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T N M+++     K++    +   M++     D  TY T+  A    G + +   +++ M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            + G  +N  + N ++H L       EA  +       G      +Y  L+    +   +
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
              + L  EM++  + P+ +T+   I  L ++GK ++A ++   +   G  PD  T+  +
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C+ GQ+E A +   KM     KPD V    LL      G L+   +F+      G 
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VT+  L+  LCK R  ++AF     M ++ + P+ +TY  +   L+ +GR+E+A K
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G                 + P++ +Y+  I+     G    A++ FE+ + K
Sbjct: 424 LLGTMESVG-----------------VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAK 466

Query: 512 GIAIN 516
           GI  N
Sbjct: 467 GIVPN 471



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 177/426 (41%), Gaps = 53/426 (12%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D+ TY T+       G   +   +++++ + G   NA ++N +I    + G   +A ++ 
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R M   G  P   TY+ L+ A  K  + E    ++  M   GL+ N  T    +  L   
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K+DEAY                                   +++  M +    P   TY
Sbjct: 276 GKIDEAY-----------------------------------EIFRRMDDEGCGPDLVTY 300

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             +I  L  +G+ E A ++  ++  +G  PD+  + T++  F   G ++   +F ++M  
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
             + PD+VT  IL+  LC+    ++A   F     +G   +  TYNTLI  L +  R+ED
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  LL  ME   + P  YTY        +SG             ETGK     V+     
Sbjct: 421 ALKLLGTMESVGVQPTAYTYNIFIDYFGKSG-------------ETGK----AVETFEKM 463

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             + I P+ ++ +  +      GR ++A  +F   R+ G+A +  TY N+M     +   
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY-NMMMKCYSKVGQ 522

Query: 534 ISKAVD 539
           + +AV+
Sbjct: 523 VDEAVN 528



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 96/191 (50%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +GC P+   +N +++   K G       L   M  +G+ P+  +Y ILV   C  G 
Sbjct: 919  MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + EA+   + +      PD   YN +ING   +  +EEA  L  EM +  ++PD+ TYN+
Sbjct: 979  VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L+     +G   +A ++ +EL   G++P+  T+N +I+ Y      + A  + +NM  +G
Sbjct: 1039 LMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098

Query: 181  FSPDCVTYNTL 191
             +P+  TY  L
Sbjct: 1099 CNPNIGTYAQL 1109



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 273 RALKLWDEMKE-RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP-DETTFNT 330
           RAL  +  + E   ++ +T T N M+  L    K E    +  E +Q  +I  D  T+ T
Sbjct: 104 RALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVF-EFMQKKIIRRDLDTYLT 162

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           I       G + +     NKM +  F  +  + N L+  L + G   +AL+ +R  + +G
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
                 TY+ L+ +L K+R  E    LL EME+  L P+ YT+      L  +G+++EA 
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +    M + G                   P  ++Y+  I+  C+ G+ ++A ++F + + 
Sbjct: 283 EIFRRMDDEG-----------------CGPDLVTYTVLIDALCNAGQLENAKELFVKMKA 325

Query: 511 KGIAINKSTYMNLMN 525
            G   ++  Y+ L++
Sbjct: 326 NGHKPDQVIYITLLD 340



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD + YN I++ L K  ++ E   L ++M+ +G+VP+  TYN L+      G +++A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             R+ + +      PDV+TYN LI G+  +   E A+ + K M      P++ TY  L N+
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQ 1112


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 252/534 (47%), Gaps = 20/534 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P + TY  ++D   +  +          + + GL  +    N L+ G+C+     EA+ +
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL--PDVVTYNTLINR 124
           +   T     +PDV++Y++L+   C+ G   +A  L + M     +  PDVV Y T+I+ 
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A  L  E+ + GI P+ VT++ ++   CK   + KA   +R M   G  PD
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI      G  +EA R+   M R  +  + +TLN ++ +LC   K+ EA  + +
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  SY  ++ GY           L+D M    I P  +T++ +I   +  G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+ + NE+   G+ PD  T+ T+I   C  G+++ A++  N+M+++   PD    +
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G C  G L KA +     +  G  +D V ++++I++LCK  R+ DA  +       
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNV 532

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              PD   Y+ +       G++E+A +    MV  G                 I+P+ + 
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-----------------IEPNVVV 575

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Y   +N +C  GR  + L +F E  QKGI  +   Y  +++GL    +++   V
Sbjct: 576 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKV 629



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 224/447 (50%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  C PD V Y T++D  FK+G +N+  DL  +M ++G+ P+  TY+ +V   CK   + 
Sbjct: 216 GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMG 275

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A   +  M     LPD WTYN LI G+ + G  +EA R+ KEM    +LPDVVT N L+
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
               + G+  EA  + D +   G  P+  ++ IM+  Y  +G +     +   M  +G +
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  T++ LI A    G +++A  + + M   G+K + +T  T++  LC   K+D+A   
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N    +G   D+ +Y  LI G+       +A +L  E+    +      ++++I  L +
Sbjct: 456 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCK 515

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+   A ++ +  +  G  PD   ++ ++ G+C  G++EKAL+  + MV    +P++V 
Sbjct: 516 LGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 575

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L++G C+ G +++ L  FR  + KG    ++ YN +I  L    R   A     EM 
Sbjct: 576 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMT 635

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA 449
           E  +  ++ TY  +     ++   +EA
Sbjct: 636 ESGIAINKCTYNIVLRGFFKNRCFDEA 662



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 255/531 (48%), Gaps = 19/531 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWL 61
            GC+PD  +Y+ +L +L  +GK  +  DLL  M + G V  P+   Y  ++  + K G +
Sbjct: 180 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDV 239

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M Q    PD+ TY+ +++  C A  + +A    ++M +  +LPD  TYN L
Sbjct: 240 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNL 299

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +  +G+  EA ++  E+  H I P+ VT N+++   CK GKI +A  +   M   G 
Sbjct: 300 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQ 359

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD  +Y  +++     G + +   + D+M   G+  +  T + ++        LD+A +
Sbjct: 360 NPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMI 419

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           + N     G   D V+Y T+I    R  K + A++ +++M ++ + P  + Y+ +I G  
Sbjct: 420 IFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 479

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             G   +A +++ E++ +GM  D   F++II+  C  G++  A    +  V     PD V
Sbjct: 480 THGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAV 539

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
             ++L+ G C  G +EKAL+ F + +  G   + V Y TL++  CK  R+++   L  EM
Sbjct: 540 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM 599

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +K + P    Y  I   L  +GR   A+     M E+G                 I  +
Sbjct: 600 LQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG-----------------IAIN 642

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             +Y+  +        + +A+ +F+E R   + I+  T   ++ G+ + R+
Sbjct: 643 KCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 693



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 219/425 (51%), Gaps = 2/425 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPDN TYN ++      G+  E   +  +M++  ++P+  T N+L+   CK G +KEA
Sbjct: 288 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA 347

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D M      PDV++Y +++NG+   G L +   L   M    + PD+ T++ LI  
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G   +A  + +E+ +HG+KP+ VT+  +I   C+ GK+D A +    M + G +PD
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y+ LI   C  G++ +A  ++  +   G++++ +  ++I++ LC   ++ +A  + +
Sbjct: 468 KYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFD 527

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G + D V Y  L+ GY    K  +AL+++D M    I P+   Y  ++ G  + G
Sbjct: 528 LTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIG 587

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKMVEKSFKPDIVTC 363
           + ++ + +  E+LQ G+ P    +N II G    G+ V   ++FH +M E     +  T 
Sbjct: 588 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFH-EMTESGIAINKCTY 646

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           NI+L G  +    ++A+  F+        +D +T NT+I+ + + RR+E+A  L + +  
Sbjct: 647 NIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISR 706

Query: 424 KKLGP 428
             L P
Sbjct: 707 SGLVP 711



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 174/323 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD  T++ ++ A    G L++   + ++M+  G+ P+  TY  +++  C++G 
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM   + M      PD + Y+ LI G+C  G L +A  L  E+ +  +  D+V +++
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSS 508

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   + GR M+A  + D     G  P+AV +++++  YC  GK++KA ++   M   G
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V Y TL++  CK G ++E   +   M +KG+K +TI  N I+  L    +   A 
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +  +  ++ G  +++ +Y  ++ G+F++   + A+ L+ E++   +     T N MI G+
Sbjct: 629 VKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 688

Query: 301 SQSGKTEQAIDMLNELLQSGMIP 323
            Q+ + E+A D+   + +SG++P
Sbjct: 689 FQTRRVEEAKDLFASISRSGLVP 711



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 212/475 (44%), Gaps = 56/475 (11%)

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L P   TY  L++    + R   A     +L   G++ + +  N ++K +C+  + D+A 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 171 KI------------------------------------VRNMEENGF--SPDCVTYNTLI 192
            I                                    +R M E G   SPD V Y T+I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K G++ +A  +   M ++G+  + +T ++++H LC  + + +A   L     +G  
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  +Y  LI GY    +   A++++ EM+   I+P   T N ++  L + GK ++A D+
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + +   G  PD  ++  +++G+ ++G +       + M+     PDI T ++L+     
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L+KA+  F      G   D VTY T+I++LC+  +++DA    ++M ++ + PD+Y 
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 433 YAAIHTALVESGRLEEAQK----------------FTSIMVETGKINHQVVQPNTSKTPE 476
           Y  +       G L +A++                F+SI+    K+   +   N      
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTV 530

Query: 477 EI--DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +   P ++ YS  ++ +C  G+ + AL++F+     GI  N   Y  L+NG  K
Sbjct: 531 NVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCK 585



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 113/215 (52%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V +++I++ L K G++ + +++       G  P+   Y++L+ GYC +G +++A+RV 
Sbjct: 502 DIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVF 561

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M      P+V  Y  L+NG+C  G ++E   L +EM    + P  + YN +I+  F +
Sbjct: 562 DAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVA 621

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           GR++ A     E+ E GI  N  T+NI+++ + K    D+A  + + +       D +T 
Sbjct: 622 GRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITL 681

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           NT+I    +   +EEA  +   + R GL    +T+
Sbjct: 682 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTV 716


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 245/474 (51%), Gaps = 21/474 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VT+N +++     G+++    ++  + K G  PN  T+  L+ G+C    
Sbjct: 80  MEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDK 139

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA--GMLEEAFRLRKEMESLKLL-PDVVT 117
           + +A+ + D M   +   D   Y  LING C +  G    A +L ++ME  +L+ P+++ 
Sbjct: 140 MLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIM 199

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG------------- 164
           YNT+++   + G   EA  L  ++   GI P+  T++ +I   C+ G             
Sbjct: 200 YNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFC 259

Query: 165 ---KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
              K+D+A ++   M E G   D + YN L++  C    + EA ++  +M  +G + +TI
Sbjct: 260 LNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTI 319

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T   ++H  C   K+DEA  L +   +RG   D  SY  LI GY + E+   A+ L ++M
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP-DETTFNTIIHGFCSEGQ 340
             + ++P+  TYN+++ GL +SG    A  +++E+      P D TT+N ++   C    
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIEC 439

Query: 341 VEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           VEKA+ F   ++ E+SF P++ + NIL+SG C+   L++A+  F     K    D VTYN
Sbjct: 440 VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYN 499

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            L+ +L   ++L+ A  LL ++ ++ + P+  TY  +   L + GR + AQK +
Sbjct: 500 ILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKIS 553



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 258/555 (46%), Gaps = 76/555 (13%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  IL  + K        DL + M+ +G+VP   T+NIL++ +C +G +  A  
Sbjct: 51  LPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFS 110

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  + +    P+V T+  L+ G+C    + +A  +  EM + ++  D V Y TLIN   
Sbjct: 111 VMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLC 170

Query: 127 ES--GRSMEAFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
           +S  G+   A +L+ +++E   +KPN + +N ++   CK+G I++A  +   M   G  P
Sbjct: 171 KSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFP 230

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TY++LI   C+AG  +E                   + ++L+  C   K+DEA  L 
Sbjct: 231 DIFTYSSLIYGLCRAGQRKE-------------------VTSLLNGFCLNNKVDEARELF 271

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N   +RG   D ++Y  L+ GY  + K   A KL+  M ER   P T TY  ++ G    
Sbjct: 272 NVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLI 331

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K ++A ++ + +++ G++PD  ++N +I G+C   +V +A+     M  K+  P+I+T 
Sbjct: 332 DKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITY 391

Query: 364 NILLSGLCREG------------------------------------ILEKALKFFRSWI 387
           N ++ GLC+ G                                     +EKA+ FF+  I
Sbjct: 392 NSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLI 451

Query: 388 LKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
            +     +V +YN LIS  CK RRL++A  L + M  K L PD  TY  +  AL    +L
Sbjct: 452 FERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQL 511

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           ++A      +V+ G                 I P+  +Y+  IN     GR K A +I  
Sbjct: 512 DKAIALLVQIVDQG-----------------ISPNLRTYNILINGLHKGGRPKTAQKISL 554

Query: 507 ETRQKGIAINKSTYM 521
               +G   +  TY+
Sbjct: 555 YLSIRGYHPDVKTYI 569



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 214/424 (50%), Gaps = 31/424 (7%)

Query: 9   DNVTYNTILDALFKK--GKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEAM 65
           D+V Y T+++ L K   GK      LL  M+++ LV PN   YN +V G CK G + EA 
Sbjct: 158 DDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEAR 217

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE------AFRLRKEMESLKLL------- 112
            +   M      PD++TY+ LI G C AG  +E       F L  +++  + L       
Sbjct: 218 VLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIER 277

Query: 113 ---PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
               D++ YN L+N +  + +  EA KL   + E G +P+ +T+ I++  YC   K+D+A
Sbjct: 278 GEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEA 337

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
             +   M E G  PD  +YN LI   CK   + EA  +++ M  K L  N IT N+++  
Sbjct: 338 RNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDG 397

Query: 230 LCCEKKLDEAYMLLNSASKRGYYL-----DEVSYGTLITGYFRDEKANRALKLWDEMK-E 283
           LC    + +A+ L++      +Y      D  +Y  L+    R E   +A+  +  +  E
Sbjct: 398 LCKSGGILDAWKLVDEM----HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE 453

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R   P+ ++YN +I G  ++ + ++AI++ N +    ++PD  T+N ++    +  Q++K
Sbjct: 454 RSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDK 513

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A+    ++V++   P++ T NIL++GL + G  + A K      ++G   D  TY  +I+
Sbjct: 514 AIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IIN 571

Query: 404 SLCK 407
            LCK
Sbjct: 572 ELCK 575



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 212/462 (45%), Gaps = 36/462 (7%)

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C    +++A  L   M  +  LP +V +  ++    +      A  L   ++  G+ P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           VT NI+I  +C  G++D A  ++  + + G  P+ VT+ TL+   C    M +A  + D 
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 211 MGRKGLKMNTITLNTILHTLCCEK--KLDEAYMLLNSASKRGYY-LDEVSYGTLITGYFR 267
           M  + ++ + +   T+++ LC  K  K   A  LL    +R     + + Y T++ G  +
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG----------------KTEQAID 311
           D   N A  L  +M  + I P  FTY+++I+GL ++G                K ++A +
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + N +++ G   D   +N +++G+C   +V +A +  + MVE+  +PD +T  IL+ G C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
               +++A   F   I +G   D  +YN LI   CK  R+ +A  LL +M  K L P+  
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY ++   L +SG + +A K    M       H   QP          P   +Y+  +  
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEM-------HYCCQP---------PPDVTTYNILLES 433

Query: 492 HCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGLIKRRK 532
            C     + A+  F+    ++  A N  +Y  L++G  K R+
Sbjct: 434 LCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRR 475



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 39/232 (16%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  +YN ++    K  ++ E  +LL DM  + LVPN  TYN +V G CK G + +A
Sbjct: 348 GLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDA 407

Query: 65  MRVVD-------------------------------------LMTQNKSLPDVWTYNMLI 87
            ++VD                                     L+ +    P+VW+YN+LI
Sbjct: 408 WKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILI 467

Query: 88  NGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIK 147
           +G C    L+EA  L   M    L+PD+VTYN L++  F   +  +A  L+ ++ + GI 
Sbjct: 468 SGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGIS 527

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           PN  T+NI+I    K G+   A KI   +   G+ PD  TY  +I+  CK G
Sbjct: 528 PNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCKGG 577


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 225/415 (54%), Gaps = 5/415 (1%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+  + N L+S       +  A R      + +  PD++T+N++I+G C  G L +A  +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAF---KLIDELDEHGIKPNAVTHNIMIKW 159
            K++ +  L P VVTYNT+I+ + + GR+   +    L+ E+ E GI PN VT N+++  
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           YCK+     A ++   M++ G +   VTY+ L+   C  G +EE  +++D M   GL  N
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
             TLN++L+  C +  + +A   ++S  ++    + V+Y  L+ GY R +K   AL + +
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M  + + P+   YN +I G +++G       +L+E+   G+  D  T+N +I   C +G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKA-VDSVTY 398
           +V KA++  ++M+    +P  +T N +++G C +G ++ A +  R+ + KGK   + VTY
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYE-IRTRMEKGKKRANVVTY 506

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           N  I  LC+  ++E+   LL+EM EK L P+  TY  I   ++E G   + + FT
Sbjct: 507 NVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVRGFT 561



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 213/413 (51%), Gaps = 3/413 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   + N +L AL    +++          ++ + P+  T+NI++SG CK G L++A  V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 68  VDLMTQNKSLPDVWTYNMLINGWC---NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +      P V TYN +I+G+C    AG +     L KEM    + P+ VT+N L+N 
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +   +  A ++ +E+ + GI  + VT++ ++   C EGK+++  K+V  M++ G  P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T N++++  CK G M +A   +D M +K +K N +T   ++       K+ +A  +  
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S +G   +   Y  LI G+ R+        L DEM+ + +     TYN +I  L   G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A+ +L+E+L  G+ P   T+NTII+G+C +G ++ A +   +M +   + ++VT N
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYN 507

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           + +  LCR G +E+  +     + KG   + VTY+T+   + ++    D  G 
Sbjct: 508 VFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVRGF 560



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 193/369 (52%), Gaps = 21/369 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGK---LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           +  +G  P  VTYNTI+D   K+G+   +  V  LL +M + G+ PN  T+N+LV+GYCK
Sbjct: 211 IRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCK 270

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
                 A+RV + M Q      V TY+ L+ G C+ G +EE  +L  EM+ L L+P++ T
Sbjct: 271 DSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLAT 330

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
            N+++N F + G   +A   ID +++  +KPN VT+ I++  Y +  K+  A  +   M 
Sbjct: 331 LNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMS 390

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G  P+   YN LI    + G+      ++D M  KG++ + +T N ++  LC + ++ 
Sbjct: 391 GKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVR 450

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL+     G     ++Y T+I GY        A ++   M++ +   +  TYN  I
Sbjct: 451 KAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFI 510

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
             L + GK E+  ++LNE+L+ G++P+  T++TI  G                M+EK + 
Sbjct: 511 KCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG----------------MMEKGYT 554

Query: 358 PDI--VTCN 364
           PD+   TC+
Sbjct: 555 PDVRGFTCS 563



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 188/394 (47%), Gaps = 23/394 (5%)

Query: 131 SMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           S EAF L  D    H  +P+A + N ++       ++D A +  +       SPD  T+N
Sbjct: 132 SYEAFLLAGDAHPRH--RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFN 189

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY---MLLNSA 246
            +I   CK G + +A  +   +   GL  + +T NTI+   C   +    Y    LL   
Sbjct: 190 IVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEM 249

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G   +EV++  L+ GY +D     A+++++EMK++ I  S  TY+A++WGL   GK 
Sbjct: 250 VEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKV 309

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E+ + +++E+   G++P+  T N++++GFC +G +  A  + + M +K+ KP++VT  IL
Sbjct: 310 EEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTIL 369

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  R   ++ AL    +   KG   ++  YN LI+   +        GLL EM  K +
Sbjct: 370 VDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGV 429

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
             D  TY  +  AL   G + +A K    M+  G                 ++P  ++Y+
Sbjct: 430 RADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVG-----------------LEPVHLTYN 472

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             IN +C +G  K A +I     +     N  TY
Sbjct: 473 TIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTY 506



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 206/468 (44%), Gaps = 85/468 (18%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           EAF L  +    +  P   + N L++    + R   A +         + P+  T NI+I
Sbjct: 134 EAFLLAGDAHP-RHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVI 192

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              CK G++ KA  + +++   G +P  VTYNT+ID  CK              GR G  
Sbjct: 193 SGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCK-------------RGRAG-- 237

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
                   + H     K++ EA          G   +EV++  L+ GY +D     A+++
Sbjct: 238 -------RMYHVDALLKEMVEA----------GISPNEVTFNVLVNGYCKDSNTAAAVRV 280

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           ++EMK++ I  S  TY+A++WGL   GK E+ + +++E+   G++P+  T N++++GFC 
Sbjct: 281 FEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCK 340

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           +G +  A  + + M +K+ KP++VT  IL+ G  R   ++ AL    +   KG   ++  
Sbjct: 341 KGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARI 400

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           YN LI+   +        GLL EM  K +  D  TY  +  AL   G + +A K    M+
Sbjct: 401 YNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEML 460

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI------------- 504
             G                 ++P  ++Y+  IN +C +G  K A +I             
Sbjct: 461 MVG-----------------LEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANV 503

Query: 505 ---------------FEETRQ-------KGIAINKSTYMNLMNGLIKR 530
                           EET +       KG+  N  TY  +  G++++
Sbjct: 504 VTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEK 551


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 210/381 (55%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P+ +T++T+++    +GK+    +L   M  +G  PN  +Y+I++ G C++G   E
Sbjct: 155 LGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTE 214

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            +++++ M      PDV  YN +++  C   ++ EA  +  +M+   +LP VVTY +LI+
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIH 274

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                GR  EAF L++E+    I P+ V  +++I   CKEG++ +A  I++ M E G  P
Sbjct: 275 GLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEP 334

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TYNTL++  C    + EA ++ +VM  KG   +  + + +++  C  K++DEA  L 
Sbjct: 335 DVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLF 394

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  + RG   D VSY TLI+G  +  +   A +L+ +M      P+  TY+ ++  LS+ 
Sbjct: 395 DEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQ 454

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  +QA+ +   +  SG+ PD  T+N +I G C  G+ + A +   ++  K  +P+   C
Sbjct: 455 GYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVC 514

Query: 364 NILLSGLCREGILEKALKFFR 384
              + G+C+ G+L++A K FR
Sbjct: 515 TPTIDGVCKGGLLDEAHKAFR 535



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 227/445 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  +  AL +      V  L   M+  G+  +  +  IL++ +C+L  +     
Sbjct: 88  LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFS 147

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  + +    P+V T++ LING+C  G +  A  L   M +    P+V +Y+ +I    
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G++ E  KL++ +   G +P+ V +N ++   CK+  +++A  I   M+  G  P  V
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +LI      G  +EAF +++ M    +  + +  + ++  +C E ++ EA ++L + 
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           ++ G   D  +Y TL+ GY    +   A K+++ M  +  MP  F+++ ++ G  ++ + 
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++A  + +E+   G+IPD  ++NT+I G C   +  +A +    M    + P++VT +IL
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L  L ++G L++A+  FR+    G   D VTYN +I  +CK  + +DA  L +E+  K L
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507

Query: 427 GPDRYTYAAIHTALVESGRLEEAQK 451
            P+ +        + + G L+EA K
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHK 532



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 217/428 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D ++   +++   +   ++    +L  + K GL PN  T++ L++G+C  G 
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGK 176

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ + D+M      P+V +Y+++I G C  G   E  +L + M+ +   PDVV YNT
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++R  +     EA  +  ++   GI P  VT+  +I      G+  +A  ++  M+   
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V ++ LID  CK G + EA  ++  M   G++ +  T NT+++  C   ++ EA 
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEAR 356

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +G   D  S+  L+ GY + ++ + A +L+DEM  R ++P T +YN +I GL
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+ +  +A ++  ++  +G  P+  T++ ++     +G +++A+     M     KPD+
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT NI++ G+C+ G  + A + F    +KG   ++      I  +CK   L++A     +
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536

Query: 421 MEEKKLGP 428
           ME+    P
Sbjct: 537 MEKDDCSP 544



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 227/469 (48%), Gaps = 17/469 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   + M     LP +  +  L +        +    L K+ME   +  DV++   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F         F ++ ++ + G++PN +T + +I  +C EGKI +A ++   M   G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+  +Y+ +I   C+ G   E  ++++ M   G + + +  NTI+  LC ++ ++EA 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G     V+Y +LI G     +   A  L +EMK   IMP    ++ +I  +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+  +A  +L  + + G+ PD  T+NT+++G+C   +V +A +    M+ K   PD+
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + +IL++G C+   +++A + F     +G   D+V+YNTLIS LC+ RR  +A  L  +
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      P+  TY+ +   L + G L++A      M  +G                 + P
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG-----------------LKP 474

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             ++Y+  I+  C  G++KDA ++F E   KG+  N       ++G+ K
Sbjct: 475 DLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCK 523



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 203/437 (46%), Gaps = 17/437 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + +A      M +   LP +V +  L +             L  +++  GI  + ++  I
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C+   +D    ++  + + G  P+ +T++TLI+  C  G +  A  + DVM  +G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            K N  + + I+  LC   K  E   LL      G   D V Y T++    +D   N A+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            ++ +MK   I+P+  TY ++I GL   G+ ++A  +LNE+    ++PD   F+ +I   
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C EG+V +A      M E   +PD+ T N L++G C    + +A K F   I KG+  D 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            +++ L++  CK +R+++A  L  EM  + L PD  +Y  + + L ++ R  EA++    
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M   G                   P+ ++YS  ++    QG    A+ +F      G+  
Sbjct: 432 MHSNG-----------------YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKP 474

Query: 516 NKSTYMNLMNGLIKRRK 532
           +  TY  +++G+ K  K
Sbjct: 475 DLVTYNIMIDGMCKYGK 491



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 163/329 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD V YNTI+D L K   +NE   +   MK  G++P   TY  L+ G   LG 
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGR 281

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA  +++ M     +PD+  +++LI+  C  G + EA  + K M  + + PDV TYNT
Sbjct: 282 WKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNT 341

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N +      +EA K+ + +   G  P+  + +I++  YCK  +ID+A ++   M   G
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V+YNTLI   C+A    EA  +   M   G   N +T + +L  L  +  LD+A 
Sbjct: 402 LIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAM 461

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +    G   D V+Y  +I G  +  K   A +L+ E+  + + P+ +     I G+
Sbjct: 462 GLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGV 521

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFN 329
            + G  ++A     ++ +    P +   N
Sbjct: 522 CKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 149/333 (44%), Gaps = 55/333 (16%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V +G L +   R +     + L  +M+   I     +   +I    +    +    +L +
Sbjct: 92  VKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGK 151

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +++ G+ P+  TF+T+I+GFC EG++ +A++  + MV + +KP++ + +I++ GLCR G 
Sbjct: 152 IIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGK 211

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKER-------------------------- 409
             + +K      + G   D V YNT++  LCK+R                          
Sbjct: 212 TTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTS 271

Query: 410 ---------RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
                    R ++AFGLL+EM+   + PD   ++ +   + + G + EA+     M E G
Sbjct: 272 LIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG 331

Query: 461 KINHQVVQPNT-------------SKTPEEID------PSSISYSEKINEHCSQGRYKDA 501
            +   V   NT             ++   E+       P   S+S  +N +C   R  +A
Sbjct: 332 -VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEA 390

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Q+F+E   +G+  +  +Y  L++GL + R+ +
Sbjct: 391 KQLFDEMTHRGLIPDTVSYNTLISGLCQARRPL 423


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 235/459 (51%), Gaps = 5/459 (1%)

Query: 4   FGCLPD-NV-TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           F  LPD NV ++N +L AL   G+L +      +M      P+  TY  +V GYC  G L
Sbjct: 247 FRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGEL 303

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + A++++D M       +   Y  +I   CN G + +A R+ ++M    +  D V + T+
Sbjct: 304 ENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTV 363

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ F   G    A +L +E+ + G+  + VTH  +I   C+ G++ +A ++++ M + G 
Sbjct: 364 ISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL 423

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D VTY  LID  CK GNM EAFR+ + M  + +  N +T   +   LC +  +  A  
Sbjct: 424 DVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANE 483

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL+    +G  L+  +Y +LI G  +     +A+++  EM+        +TY  +I  L 
Sbjct: 484 LLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLC 543

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +SG+ ++A +ML E+L  G+ P   T+N +++GFC  G+VE   +    M+EK+ +P++V
Sbjct: 544 KSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVV 603

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+   C +  ++   + ++    +  A +  TYN LI   CK R +++A     EM
Sbjct: 604 TYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEM 663

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            EK L     +Y+A+   L +  +  EA+ F   M   G
Sbjct: 664 IEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEG 702



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 227/428 (53%), Gaps = 2/428 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY T++     +G+L     LL +M  +GL  N T Y  +++  C  G + +A+RV
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRV 344

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ MT +    D   +  +I+G+C+ G L  A RL +EM+   L  D VT+  LIN    
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   EA +++ E+ + G+  + VT+ ++I  YCK G + +A ++   M     +P+ VT
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L D  CK G++  A  ++  M  KGL++N  T N++++ LC    L++A  ++    
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+  D  +Y TLI    +  + +RA  +  EM ++ I PS  TYN ++ G   SG+ E
Sbjct: 525 AAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+  + P+  T+N+++  +C +  ++   + +  M  +   P+  T NIL+
Sbjct: 585 GGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   +++AL F +  I KG  + + +Y+ LI  L K+++  +A     +M  + L 
Sbjct: 645 KGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLT 704

Query: 428 --PDRYTY 433
             PD Y++
Sbjct: 705 AEPDVYSF 712



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 260/509 (51%), Gaps = 33/509 (6%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPD--VWTYNMLIN 88
           +LL  +++ GL P+  + N ++S       L EA+ +       + LPD  V ++N+L+ 
Sbjct: 214 ELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALF------RELPDKNVCSHNILLK 263

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
              +AG L++A +   EM S    PDVVTY T+++ +   G    A KL+DE+   G++ 
Sbjct: 264 ALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           NA  +  +I   C +G++  A +++ +M  +G + D V + T+I   C  G++  A R+ 
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           + M ++GL  + +T   +++ LC   +L EA  +L     +G  +D V+Y  LI GY + 
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKR 440

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A ++ +EM  R++ P+  TY A+  GL + G    A ++L+E+   G+  +  T+
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTY 500

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N++I+G C  G +E+A++   +M     + D+ T   L+  LC+ G  ++A    +  + 
Sbjct: 501 NSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLD 560

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG      TYN L++  C   R+E    LL  M EK + P+  TY     +L++   +++
Sbjct: 561 KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTY----NSLMKQYCIDK 616

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
             K T+   E  K  H           +E+ P+  +Y+  I  HC     K+AL   +E 
Sbjct: 617 NMKSTT---EIYKGMHS----------QEVAPNENTYNILIKGHCKARNMKEALYFHQEM 663

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            +KG+ +  S+Y  L+  L+ ++K  S+A
Sbjct: 664 IEKGLRLTASSYSALIR-LLNKKKKFSEA 691



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 206/423 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   +   Y +++  L  KG++++   +L DM   G+  +   +  ++SG+C  G 
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A R+ + M +     D  T+  LING C AG L+EA R+ +EM    L  DVVTY  
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G  +EAF++ +E+    + PN VT+  +    CK+G +  A +++  M   G
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +  TYN+LI+  CK GN+E+A R+M  M   G + +  T  T++ TLC   + D A+
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L     +G      +Y  L+ G+    +     KL + M E+ + P+  TYN+++   
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                 +   ++   +    + P+E T+N +I G C    +++AL FH +M+EK  +   
Sbjct: 613 CIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTA 672

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + + L+  L ++    +A  FF     +G   +   Y+  +     E  LE    L  E
Sbjct: 673 SSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDE 732

Query: 421 MEE 423
           + E
Sbjct: 733 LVE 735



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 180/355 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VT+  +++ L + G+L E   +L +M  +GL  +  TY +L+ GYCK G 
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA RV + M   +  P+V TY  L +G C  G +  A  L  EM +  L  +V TYN+
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G   +A +++ E++  G + +  T+  +I   CK G+ D+A  +++ M + G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TYN L++  C +G +E   ++++ M  K ++ N +T N+++   C +K +    
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +    +E +Y  LI G+ +      AL    EM E+ +  +  +Y+A+I  L
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           ++  K  +A    +++   G+  +   ++  +    +E  +E  +   +++VE S
Sbjct: 683 NKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEAS 737


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 201/388 (51%), Gaps = 3/388 (0%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           +LD +        +    S++ + G  P    YNIL++ +CK G +++A  + + + +  
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P   ++N LING C +  L+E FRL+K ME  ++ PDV TY+ LI+   + GR   A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           +L DE+ + G++PN +T   +I   C+  +ID A      M   G  PD V YNTL++  
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK G++ +A +++D M   G+K + IT  T++   C E  L+ A  +    ++ G  LD 
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V++  LI+G+ RD +   A +   EM E  + P   TY  +I G  + G  +    +L E
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +  +G  P   T+N +++G C +GQ++ A      M+     PD +T NILL G C+ G 
Sbjct: 494 MQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLIS 403
            E  LK       KG  VD   Y +L+S
Sbjct: 554 AEDLLKLRNE---KGLIVDYAYYTSLVS 578



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 213/445 (47%), Gaps = 20/445 (4%)

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           + ++ L+  + ++G + +A +  + + +            L+++   S   +  +    E
Sbjct: 154 FVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSE 213

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E+G  P    +NI+I  +CKEG I  A  I   + + G  P  V++NTLI+  CK+ N
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           ++E FR+   M    +  +  T + ++H LC E +LD A  L +   +RG   + +++  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI G  R  + + A+  + +M    + P    YN ++ GL + G   +A  +++E+   G
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           M PD+ T+ T+I G+C EG +E A++    M E+    D V    L+SG CR+G +  A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +  R  +  G   D  TY  +I   CK+  ++  F LL EM+     P   TY  +   L
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G+++ A      M+  G                 + P  I+Y+  +  HC  G+ +D
Sbjct: 514 CKQGQMKNANMLLEAMLNLG-----------------VTPDDITYNILLEGHCKNGKAED 556

Query: 501 ALQIFEETRQKGIAINKSTYMNLMN 525
            L++  E   KG+ ++ + Y +L++
Sbjct: 557 LLKLRNE---KGLIVDYAYYTSLVS 578



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 184/347 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  P    YN +++   K+G + + + + ++++K+GL P   ++N L++G CK   L E
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             R+   M +N+  PDV+TY++LI+G C  G L+ A +L  EM+   L P+ +T+  LI+
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               S R   A     ++   G+KP+ V +N ++   CK G ++KA K+V  M   G  P
Sbjct: 337 GQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY TLID  CK G++E A  +   M  +G+ ++ +    ++   C + ++ +A   L
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   D+ +Y  +I GY +        KL  EM+     P   TYN ++ GL + 
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           G+ + A  +L  +L  G+ PD+ T+N ++ G C  G+ E  L+  N+
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 196/365 (53%), Gaps = 7/365 (1%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P V  YN+LIN +C  G + +A  +  E+    L P  V++NTLIN   +S    E F+L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
              ++E+ I P+  T++++I   CKEG++D A ++   M++ G  P+ +T+  LID  C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           +  ++ A      M   G+K + +  NT+L+ LC    +++A  L++     G   D+++
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI GY ++     A+++   M E  ++     + A+I G  + G+   A   L E++
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           ++GM PD+ T+  +I G+C +G V+   +   +M     KP ++T N+L++GLC++G ++
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A     + +  G   D +TYN L+   CK  + ED   LL    EK L  D Y Y   +
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVD-YAY---Y 573

Query: 438 TALVE 442
           T+LV 
Sbjct: 574 TSLVS 578



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 120/212 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD V YNT+L+ L K G +N+ R L+ +M+  G+ P++ TY  L+ GYCK G 
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGD 413

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ AM +   M +   + D   +  LI+G+C  G + +A R  +EM    + PD  TY  
Sbjct: 414 LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTM 473

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + + G     FKL+ E+  +G KP  +T+N+++   CK+G++  A  ++  M   G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            +PD +TYN L++ +CK G  E+  ++ +  G
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 224/457 (49%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD    N ++++L     +     +L  M K GL P+  T+ IL++G C  G +  
Sbjct: 105 LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGR 164

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ +VD + +     DV TY +LING C  G   EA    ++ME     P+VV Y+T+++
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G   EA  L  E+   GIKPN VT+  +I+  C  G+  +A  ++  M + G  P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  + N L+D  CK G + +A  ++  M   G   +  T N+++   C + ++DEA  + 
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                RG   D V+Y +LI G+ + +  N+A+ L DEM +    P   T+  +I G  Q 
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQV 404

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+   A ++   + + G +P+  T   I+ G C    + +AL   + M + +   +IV  
Sbjct: 405 GRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIY 464

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +I+L G+C  G L  AL+ F     KG  ++   Y  +I+   K+  L+ A  LLS MEE
Sbjct: 465 SIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEE 524

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
               PD  TY      LV    +  + K+ ++M + G
Sbjct: 525 NGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 225/436 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT+  +++ L  KG +    +L+  ++K G   +  TY +L++G CK+G 
Sbjct: 137 MLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGK 196

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+  +  M +    P+V  Y+ +++G C  G++ EA  L  EM    + P++VTY  
Sbjct: 197 TSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTC 256

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI      GR  EA  L+DE+ + G+ P+  + NI++   CKEGKI +A  ++  M   G
Sbjct: 257 LIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVG 316

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TYN+LID  C    M+EA R+ ++M  +G   + +   +++H  C  K +++A 
Sbjct: 317 EVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAM 376

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   K G+  D V++ TLI G+ +  +   A +L+  M +   +P+  T   ++ GL
Sbjct: 377 HLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGL 436

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S    +A+ + + + +S +  +   ++ I+ G CS G++  AL+  + +  K  + ++
Sbjct: 437 CKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINV 496

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
               I+++G  ++G+L+KA     +    G   DS TYN  +  L  ER +  +   L+ 
Sbjct: 497 YAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTM 556

Query: 421 MEEKKLGPDRYTYAAI 436
           M +K    D  T   I
Sbjct: 557 MRDKGFSVDATTTEMI 572



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 235/515 (45%), Gaps = 21/515 (4%)

Query: 22  KKGKL---NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL- 77
           K GKL   +E  +    M K   +P+   + +L+    K+     A+ +V  M  +  + 
Sbjct: 49  KSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIK 108

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           PD +  N++IN  C+  ++   F +   M  L L P VVT+  LIN     G    A +L
Sbjct: 109 PDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVEL 168

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +D +++ G + +  T+ ++I   CK GK  +A   +R MEE  ++P+ V Y+T++D  CK
Sbjct: 169 VDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCK 228

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G + EA  +   M  KG+K N +T   ++  LC   +  EA  LL+   K G   D  S
Sbjct: 229 DGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
              L+    ++ K  +A  +   M     +P  FTYN++I       + ++A  +   ++
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G +PD   + ++IHG+C    + KA+   ++M++  F PD+VT   L+ G C+ G   
Sbjct: 349 SRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPL 408

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A + F +    G+  +  T   ++  LCK + L +A  L   ME+  L  +   Y+ I 
Sbjct: 409 AAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIIL 468

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             +  +G+L  A +  S +   G      +Q N             +Y+  IN    QG 
Sbjct: 469 DGMCSAGKLNTALELFSCLPAKG------LQINVY-----------AYTIMINGFAKQGL 511

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              A  +     + G   +  TY   + GL+  R+
Sbjct: 512 LDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAERE 546



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 221/491 (45%), Gaps = 21/491 (4%)

Query: 44  NRTTYNILVSGYCKLGWLK---EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF 100
           N+T +   +   CK G LK   EA+     M +   LP V  + +L+           A 
Sbjct: 36  NKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI 95

Query: 101 RLRKEMES-LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            L KEM S L + PD    N +IN           F ++  + + G++P+ VT  I+I  
Sbjct: 96  SLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILING 155

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            C +G + +A ++V ++E+ G+  D  TY  LI+  CK G   EA   +  M  +    N
Sbjct: 156 LCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPN 215

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +  +T++  LC +  + EA  L    S +G   + V+Y  LI G     +   A  L D
Sbjct: 216 VVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLD 275

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM +  +MP   + N ++  L + GK  QA  ++  ++  G +PD  T+N++I  +C + 
Sbjct: 276 EMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQN 335

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           Q+++A +    MV +   PDIV    L+ G C+   + KA+      I  G   D VT+ 
Sbjct: 336 QMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWT 395

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           TLI   C+  R   A  L   M +    P+  T A I   L +S  L EA      M ++
Sbjct: 396 TLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKS 455

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                             +D + + YS  ++  CS G+   AL++F     KG+ IN   
Sbjct: 456 -----------------NLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYA 498

Query: 520 YMNLMNGLIKR 530
           Y  ++NG  K+
Sbjct: 499 YTIMINGFAKQ 509



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 199/397 (50%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TY  +++ L K GK +E    L  M+++   PN   Y+ ++ G CK G + EA+ + 
Sbjct: 180 DVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLC 239

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M+     P++ TY  LI G CN G  +EA  L  EM  + ++PD+ + N L++   + 
Sbjct: 240 LEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKE 299

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+ M+A  +I  +   G  P+  T+N +I  YC + ++D+A ++   M   G  PD V Y
Sbjct: 300 GKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAY 359

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            +LI   CK  N+ +A  ++D M + G   + +T  T++   C   +   A  L  +  K
Sbjct: 360 TSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHK 419

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   +  +   ++ G  + +  + AL L+  M++  +  +   Y+ ++ G+  +GK   
Sbjct: 420 YGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNT 479

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+++ + L   G+  +   +  +I+GF  +G ++KA    + M E    PD  T N+ + 
Sbjct: 480 ALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQ 539

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           GL  E  + +++K+      KG +VD+ T   +I+ L
Sbjct: 540 GLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 4/317 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +PD  + N ++D L K+GK+ + + ++  M   G VP+  TYN L+  YC    
Sbjct: 277 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ 336

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA RV +LM     LPD+  Y  LI+GWC    + +A  L  EM  +   PDVVT+ T
Sbjct: 337 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 396

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F + GR + A +L   + ++G  PN  T  I++   CK   + +A  +   ME++ 
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + V Y+ ++D  C AG +  A  +   +  KGL++N      +++    +  LD+A 
Sbjct: 457 LDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAE 516

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL++  + G   D  +Y   + G   + +  R++K    M+++       T   +I  L
Sbjct: 517 DLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576

Query: 301 SQSGKTEQAIDMLNELL 317
           S    T Q  + L E L
Sbjct: 577 S----TNQGDNELREFL 589



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 22/172 (12%)

Query: 371 CREGIL---EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK-KL 426
           C+ G L   ++AL FF +          + +  L+  + K +    A  L+ EM     +
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD +    +  +L     +         M++ G                 ++PS ++++
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLG-----------------LEPSVVTFT 150

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             IN  C +G    A+++ +   + G   +  TY  L+NGL K  K+ S+AV
Sbjct: 151 ILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKT-SEAV 201


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 247/515 (47%), Gaps = 23/515 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VT+ T+++   K+G+++   DL   M+++G+ P+   Y+ L+ GY K G L   
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++           DV  ++  I+ +  +G L  A  + K M    + P+VVTY  LI  
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  EAF +  ++ + G++P+ VT++ +I  +CK G +     +  +M + G+ PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y  L+D   K G M  A R    M  + +++N +  N+++   C   + DEA  +  
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520

Query: 245 SASKRGYYLDEVSYGTLI------TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
                G   D  ++ T++        + +  K    L+L+D M+  +I       N +I 
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L +  + E A    N L++  M PD  T+NT+I G+CS  ++++A +    +    F P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           + VT  IL+  LC+   ++ A++ F     KG   ++VTY  L+    K   +E +F L 
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM+EK + P   +Y+ I   L + GR++EA            I HQ +         ++
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN----------IFHQAID-------AKL 743

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            P  ++Y+  I  +C  GR  +A  ++E   + G+
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 259/559 (46%), Gaps = 26/559 (4%)

Query: 5   GCLPDNVT-YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  V+ +  +LDALF KG++ +  D    + ++G      + N ++ G   +  ++ 
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEV 269

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A R++ L+      P+V T+  LING+C  G ++ AF L K ME   + PD++ Y+TLI+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            +F++G      KL  +    G+K + V  +  I  Y K G +  A  + + M   G SP
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTY  LI   C+ G + EAF M   + ++G++ + +T ++++   C    L   + L 
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               K GY  D V YG L+ G  +      A++   +M  + I  +   +N++I G  + 
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIH------GFCSEGQVEKALQFHNKMVEKSFK 357
            + ++A+ +   +   G+ PD  TF T++        FC   +    LQ  + M      
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            DI  CN+++  L +   +E A KFF + I      D VTYNT+I   C  RRL++A  +
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK-------------INH 464
              ++    GP+  T   +   L ++  ++ A +  SIM E G               + 
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689

Query: 465 QVVQPNTSKTPEE-----IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
            V    + K  EE     I PS +SYS  I+  C +GR  +A  IF +     +  +   
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749

Query: 520 YMNLMNGLIKRRKSISKAV 538
           Y  L+ G  K  + +  A+
Sbjct: 750 YAILIRGYCKVGRLVEAAL 768



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 202/427 (47%), Gaps = 6/427 (1%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V +++ +D   K G L     +   M  QG+ PN  TY IL+ G C+ G + EA  + 
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             + +    P + TY+ LI+G+C  G L   F L ++M  +   PDVV Y  L++   + 
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G  + A +   ++    I+ N V  N +I  +C+  + D+A K+ R M   G  PD  T+
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534

Query: 189 NTLI------DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            T++      DA CK        ++ D+M R  +  +    N ++H L    ++++A   
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 594

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            N+  +     D V+Y T+I GY    + + A ++++ +K     P+T T   +I  L +
Sbjct: 595 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 654

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +   + AI M + + + G  P+  T+  ++  F     +E + +   +M EK   P IV+
Sbjct: 655 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 714

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            +I++ GLC+ G +++A   F   I      D V Y  LI   CK  RL +A  L   M 
Sbjct: 715 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774

Query: 423 EKKLGPD 429
              + PD
Sbjct: 775 RNGVKPD 781



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 187/362 (51%), Gaps = 8/362 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTY++++D   K G L     L  DM K G  P+   Y +LV G  K G +  A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480

Query: 65  MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI- 122
           MR  V ++ Q+  L +V  +N LI+GWC     +EA ++ + M    + PDV T+ T++ 
Sbjct: 481 MRFSVKMLGQSIRL-NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539

Query: 123 -----NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
                + F +  +     +L D +  + I  +    N++I    K  +I+ A K   N+ 
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E    PD VTYNT+I   C    ++EA R+ +++       NT+TL  ++H LC    +D
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  + +  +++G   + V+YG L+  + +      + KL++EM+E+ I PS  +Y+ +I
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL + G+ ++A ++ ++ + + ++PD   +  +I G+C  G++ +A   +  M+    K
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779

Query: 358 PD 359
           PD
Sbjct: 780 PD 781



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 148/346 (42%), Gaps = 47/346 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V Y  ++D L K+G +         M  Q +  N   +N L+ G+C+L    EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 65  MRVV-----------------------------------------DLMTQNKSLPDVWTY 83
           ++V                                          DLM +NK   D+   
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N++I+       +E+A +    +   K+ PD+VTYNT+I  +    R  EA ++ + L  
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
               PN VT  I+I   CK   +D A ++   M E G  P+ VTY  L+D   K+ ++E 
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           +F++ + M  KG+  + ++ + I+  LC   ++DEA  + + A       D V+Y  LI 
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFT------YNAMIWGLSQS 303
           GY +  +   A  L++ M    + P          YN   W +S+ 
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKG 801



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 45/79 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P  V+Y+ I+D L K+G+++E  ++        L+P+   Y IL+ GYCK+G 
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762

Query: 61  LKEAMRVVDLMTQNKSLPD 79
           L EA  + + M +N   PD
Sbjct: 763 LVEAALLYEHMLRNGVKPD 781



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 36/238 (15%)

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMV--------------EKSFKPDIVTCNILLSGL 370
           + +F TI H     G  + A +  ++M+              ++S   D+  C  L+   
Sbjct: 99  DPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADV--CKFLMECC 156

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G+++KAL+ F      G  +   +   +++SL    R++       ++    + P  
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216

Query: 431 YT-YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID---------- 479
            + +  +  AL   G + +A  F  +++E G     +V  N       +D          
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKGLSVDQIEVASRLLS 275

Query: 480 --------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   P+ +++   IN  C +G    A  +F+   Q+GI  +   Y  L++G  K
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  +++A  +   L+      ++M  +G VP    +N L++         +  R  +  +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN-ES 155

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           + K   DV+++ ++I G C AG +E++F L  E+      P+VV Y TLI+   + G   
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L  E+ + G+  N  T+ ++I    K G   +  ++   M+E+G  P+  TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           + +CK G  ++AF++ D M  +G+  N +T NT++  LC E K +EA  +++     G  
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + ++Y TLI G+    K  +AL L  ++K R + PS  TYN ++ G  + G T  A  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + E+ + G+ P + T+  +I  F     +EKA+Q  + M E    PD+ T ++L+ G C 
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +G + +A + F+  + K    + V YNT++   CKE     A  L  EMEEK+L P+  +
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG 460
           Y  +   L +  + +EA+     M++TG
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDTG 543



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 226/424 (53%), Gaps = 1/424 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P +  +N +L  +      N+     ++ K + +  +  ++ I++ G C+ G ++++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK-VDLDVYSFGIVIKGCCEAGEIEKS 182

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  + +    P+V  Y  LI+G C  G +E+A  L  EM    L+ +  TY  LI+ 
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++G   + F++ +++ E G+ PN  T+N ++  +CK+G+   A K+   M E G S +
Sbjct: 243 LFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCN 302

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLI   C+     EA ++MD M   G+  N IT NT++   C   KL +A  L  
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG     V+Y  L++G+ +    + A K+  EM+ER I PS  TY  +I   ++  
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMD 422

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+AI + + + + G+ PD  T++ +IHGFC +GQ+ +A +    MV K  +P+ V  N
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+EG   +AL+ FR    K    +  +Y  +I  LCKER+ ++A GL+ +M + 
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542

Query: 425 KLGP 428
            + P
Sbjct: 543 GIDP 546



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 223/451 (49%), Gaps = 18/451 (3%)

Query: 83  YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
           Y ++IN +  +  L+ +     EM     +P    +N L+     S    + ++  +E  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-S 155

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
           +  +  +  +  I+IK  C+ G+I+K+  ++  + E GFSP+ V Y TLID  CK G +E
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +A  +   MG+ GL  N  T   ++H L       + + +     + G + +  +Y  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
             + +D +   A KL+DEM+ER +  +  TYN +I GL +  K  +A  +++++   G+ 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T+NT+I GFC  G++ KAL     +  +   P +VT NIL+SG C++G    A K 
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            +    +G     +TY  LI +  +   +E A  L S MEE  L PD +TY+ +      
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
            G++ EA +   +MV                  ++++P+ + Y+  +  +C +G    AL
Sbjct: 456 KGQMNEASRLFKLMV-----------------AKKLEPNKVIYNTMVLGYCKEGSSYRAL 498

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           ++F E  +K +  N ++Y  ++  L K RKS
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKS 529



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 194/363 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           FG  P+ V Y T++D   K+G++ + +DL  +M K GLV N  TY +L+ G  K G  K+
Sbjct: 192 FGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              + + M ++   P+++TYN ++N  C  G  ++AF+L  EM    +  ++VTYNTLI 
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIG 311

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                 ++ EA K++D++   GI PN +T+N +I  +C  GK+ KA  + R+++  G SP
Sbjct: 312 GLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VTYN L+   CK G+   A +++  M  +G+K + IT   ++ T      +++A  L 
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR 431

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   + G   D  +Y  LI G+    + N A +L+  M  +++ P+   YN M+ G  + 
Sbjct: 432 SPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKE 491

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G + +A+ +  E+ +  + P+  ++  +I   C E + ++A     KM++    P     
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSIL 551

Query: 364 NIL 366
           N++
Sbjct: 552 NLI 554



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 187/331 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG + +  TY  ++  LFK G   +  ++   M++ G+ PN  TYN +++ +CK G 
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGR 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+A ++ D M +     ++ TYN LI G C      EA ++  +M+S  + P+++TYNT
Sbjct: 284 TKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F   G+  +A  L  +L   G+ P+ VT+NI++  +CK+G    A K+V+ MEE G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  +TY  LID   +  NME+A ++   M   GL  +  T + ++H  C + +++EA 
Sbjct: 404 IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +    ++V Y T++ GY ++  + RAL+L+ EM+E+++ P+  +Y  MI  L
Sbjct: 464 RLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVL 523

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +  K+++A  ++ +++ +G+ P ++  N I
Sbjct: 524 CKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 255/498 (51%), Gaps = 18/498 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D + Y  +L  L K       R +L  M ++G+      +  ++  Y + G L+ AM+V+
Sbjct: 135 DPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVL 194

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M +    P++   N  I+    A  LE+A R  + M+ + + P+VVTYN LI  + + 
Sbjct: 195 TMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDL 254

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVT 187
            +   A +LI E+   G  P+ V++  ++ + C++ +I +   ++  M ++N   PD VT
Sbjct: 255 YQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVT 314

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTL+    K G+ +EA   +     +G +++ +  + I+++ C + ++D A  ++N   
Sbjct: 315 YNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMI 374

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D V+Y  ++ G  +  K   A K+  +M +    P+T +Y A++ GL Q G + 
Sbjct: 375 TKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSL 434

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A +M+N   +    P+  T++ ++HG   EG++ +A     +M+ K F P  V  N+L+
Sbjct: 435 EAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLI 494

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC E  + +A KF    + +G AV++V + T+I   C+   ++ A  LL +M      
Sbjct: 495 KSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKH 554

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  T+ AI  AL + GR+EEA  +T  M++ G                 +DP+ ++Y  
Sbjct: 555 PDAVTFTAIIDALGKKGRIEEATVYTMKMLKKG-----------------LDPTPVTYRA 597

Query: 488 KINEHCSQGRYKDALQIF 505
            I+++C  GR ++ +++ 
Sbjct: 598 VIHQYCKMGRVEELIKLL 615



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 227/461 (49%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ +  NT +  L    KL +    L  M+  G+ PN  TYN L+ GYC L  
Sbjct: 197 MQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQ 256

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
           ++ AM ++  M      PD  +Y  ++   C    ++E   L ++M +  KL PD VTYN
Sbjct: 257 VEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYN 316

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++   + G + EA + + E +E G + + V ++ ++  +C +G++D+A +IV  M   
Sbjct: 317 TLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITK 376

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G SPD VTY  +++  CK G +EEA +M+  M + G K NT++   +L+ LC      EA
Sbjct: 377 GCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEA 436

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N++ +  +  + ++Y  ++ G  R+ K + A  +  EM  +   P+    N +I  
Sbjct: 437 REMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKS 496

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L    K  +A   + E L  G   +   F T+IHGFC    ++ AL   + M   +  PD
Sbjct: 497 LCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPD 556

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT   ++  L ++G +E+A  +    + KG     VTY  +I   CK  R+E+   LL 
Sbjct: 557 AVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLG 616

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +M  +     R  Y  +   L   G  E A K   +++ T 
Sbjct: 617 KMLSR--SKCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTA 655



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 238/470 (50%), Gaps = 8/470 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           GC PD V+Y T++  L +  ++ EVR+L+  M K   L P++ TYN LV    K G   E
Sbjct: 271 GCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADE 330

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +    +     D   Y+ ++N +C  G ++ A  +  EM +    PDVVTY  ++N
Sbjct: 331 ALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVN 390

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G+  EA K++ ++ +HG KPN V++  ++   C+ G   +A +++   EE+ ++P
Sbjct: 391 GLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTP 450

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + +TY+ ++    + G + EA  ++  M  KG     + +N ++ +LC E+K++EA   +
Sbjct: 451 NAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFM 510

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                RG  ++ V++ T+I G+ + +  + AL L D+M      P   T+ A+I  L + 
Sbjct: 511 EECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKK 570

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E+A     ++L+ G+ P   T+  +IH +C  G+VE+ ++   KM+ +S        
Sbjct: 571 GRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS--KCRTAY 628

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  LC  G  E A K     +     +D+ T + L+ S   +     A+ +   M +
Sbjct: 629 NQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFD 688

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           + L PD      +   LV  G+LEEA       V+ G I+     P++S+
Sbjct: 689 RNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNIS-----PDSSQ 733



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 222/451 (49%), Gaps = 1/451 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            +  ++ +  + GKL     +L+ M+K G+ PN    N  +        L++A+R ++ M
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERM 232

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P+V TYN LI G+C+   +E A  L  EM      PD V+Y T++    +  R 
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRI 292

Query: 132 MEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
            E   L++++  ++ + P+ VT+N ++    K G  D+A + +R  EE GF  D V Y+ 
Sbjct: 293 KEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSA 352

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++++ C  G M+ A  +++ M  KG   + +T   +++ LC   K++EA  +L    K G
Sbjct: 353 IVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHG 412

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + VSY  L+ G  +   +  A ++ +  +E    P+  TY+ ++ GL + GK  +A 
Sbjct: 413 CKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEAC 472

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           D++ E+L  G  P     N +I   C E ++ +A +F  + + +    + V    ++ G 
Sbjct: 473 DVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGF 532

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+   ++ AL       L  K  D+VT+  +I +L K+ R+E+A     +M +K L P  
Sbjct: 533 CQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTP 592

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
            TY A+     + GR+EE  K    M+   K
Sbjct: 593 VTYRAVIHQYCKMGRVEELIKLLGKMLSRSK 623



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 159/344 (46%), Gaps = 54/344 (15%)

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           +AG +  A +++ +M + G++ N +  NT +H L    KL+                   
Sbjct: 183 RAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLE------------------- 223

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
                           +AL+  + M+   I P+  TYN +I G     + E A++++ E+
Sbjct: 224 ----------------KALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEM 267

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGI 375
              G  PD+ ++ T++   C + ++++      KMV +    PD VT N L+  L + G 
Sbjct: 268 PFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGH 327

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
            ++AL+F R    +G  VD V Y+ +++S C + R++ A  +++EM  K   PD  TY A
Sbjct: 328 ADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTA 387

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           +   L + G++EEA+K    M + G                   P+++SY+  +N  C  
Sbjct: 388 VVNGLCKVGKVEEAKKMLQQMYKHG-----------------CKPNTVSYTALLNGLCQH 430

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           G   +A ++   + +     N  TY  +M+GL +R   +S+A D
Sbjct: 431 GNSLEAREMMNTSEEDWWTPNAITYSVVMHGL-RREGKLSEACD 473



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 20/243 (8%)

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P  F +  ++   S++GK   A+ +L  + ++G+ P+    NT IH      ++EKAL+F
Sbjct: 171 PEAFAH--VMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRF 228

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
             +M      P++VT N L+ G C    +E A++       KG   D V+Y T++  LC+
Sbjct: 229 LERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQ 288

Query: 408 ERRLEDAFGLLSEM-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           ++R+++   L+ +M ++ KL PD+ TY  +   L + G  +EA +F   + ET +   QV
Sbjct: 289 DKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEF---LRETEERGFQV 345

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                           + YS  +N  C QGR   A +I  E   KG + +  TY  ++NG
Sbjct: 346 --------------DKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNG 391

Query: 527 LIK 529
           L K
Sbjct: 392 LCK 394


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 228/452 (50%), Gaps = 19/452 (4%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  ++IL  L + G  +EV D   + +  G+  +   YNI+V   CKLG ++EA+ +++ 
Sbjct: 368 VIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNE 427

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M   +   DV  Y  LI G+C  G L +A  + +EM+   + PD+VTYN L+  F  +G 
Sbjct: 428 MKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGL 487

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA +L+D +   G+KPN+ THN +I+  C  GK+ +A   +  +E+         Y+ 
Sbjct: 488 KKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSA 543

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           ++D  CKA    +A+ +   + ++G+ +   +   +L +LC E + D+A +LL       
Sbjct: 544 MVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALD 603

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +++ YG LI  + RD    RA  ++D + ER I P   TY  MI G  +     +A 
Sbjct: 604 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 663

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFC---------------SEGQVEKALQFHNKMVEKS 355
           D+ N++ + G+ PD  T+  ++ G                 SE +   A  F ++M E  
Sbjct: 664 DIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMG 723

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            KPD+V   +L+   C+   L+ A+  +   I +G   D VTY  L+SS C    ++ A 
Sbjct: 724 IKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAI 783

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
            L++EM  K + PD    + +H  ++++ +++
Sbjct: 784 TLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 243/522 (46%), Gaps = 21/522 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  ++ N +++ L + GK++    +   +K+ GL PN  TY I +   C+ G  +EA
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V   M +    P+  T +  I G C+    +  +   + + +     D   Y  +I  
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRG 306

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F    +  EA  +  ++   GI P+   +  +I  YCK G + +A  +  +M  NG   +
Sbjct: 307 FCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTN 366

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           CV  ++++   C+ G   E           G+ ++ +  N ++  LC   K++EA  LLN
Sbjct: 367 CVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLN 426

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               R   LD V Y TLI GY    K   A  +++EMKER I P   TYN ++ G S++G
Sbjct: 427 EMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNG 486

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             ++A+++L+ +   G+ P+  T N II G C  G+V++A  F N + +K  +      +
Sbjct: 487 LKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYS 542

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+     KA + F     +G  V   +   L+SSLC E   + A  LL  M   
Sbjct: 543 AMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLAL 602

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            + P++  Y  +  A    G ++ AQ    ++VE G                 I P  I+
Sbjct: 603 DVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG-----------------ITPDVIT 645

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           Y+  IN +C     ++A  IF + +++GI  +  TY  +++G
Sbjct: 646 YTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDG 687



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 245/539 (45%), Gaps = 36/539 (6%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   Y  ++     + KL E  D+  DM  +G+ P+   Y  L+  YCK G L +A+ + 
Sbjct: 296 DTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALH 355

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M  N    +    + ++   C  GM  E     KE     +  D V YN +++   + 
Sbjct: 356 NDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKL 415

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  EA +L++E+    +  + V +  +I  YC +GK+  A  +   M+E G  PD VTY
Sbjct: 416 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 475

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N L+    + G  +EA  ++D +G +GLK N+ T N I+  LC   K+ EA   LN+   
Sbjct: 476 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 535

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +       +Y  ++ GY +     +A +L+  + ++ I+    +   ++  L   G+ ++
Sbjct: 536 KCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDK 591

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A+ +L  +L   + P++  +  +I  FC +G +++A    + +VE+   PD++T  ++++
Sbjct: 592 ALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMIN 651

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK-----ERRLE----------D 413
           G CR   L +A   F     +G   D +TY  ++    K      R L+          D
Sbjct: 652 GYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMD 711

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A    SEM+E  + PD   Y  +  +  ++  L++A      M+  G             
Sbjct: 712 ASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARG------------- 758

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               + P  ++Y+  ++  CS+G    A+ +  E   KGI  +      L  G++K RK
Sbjct: 759 ----LQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARK 813



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 270/568 (47%), Gaps = 47/568 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK--- 57
           ++  G  P++ TY   + AL +KG   E  D+  +M++ G+ PN  T +  + G C    
Sbjct: 218 LKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKR 277

Query: 58  --LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
             LG+  EA+R   L   N  + D + Y  +I G+C+   L+EA  +  +M +  + PD 
Sbjct: 278 SDLGY--EALRA--LRAANWPI-DTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDG 332

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
             Y  LI+ + ++G  ++A  L +++  +GIK N V  + +++  C+ G   +     + 
Sbjct: 333 YIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKE 392

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
             ++G   D V YN ++DA CK G +EEA  +++ M  + + ++ +   T++   C + K
Sbjct: 393 FRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGK 452

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           L +A  +     +RG   D V+Y  L+ G+ R+     AL+L D +  + + P++ T+N 
Sbjct: 453 LVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNR 512

Query: 296 MIWGLSQSGK-------------------------------TEQAIDMLNELLQSGMIPD 324
           +I GL  +GK                               T +A ++ + L + G++  
Sbjct: 513 IIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVK 572

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           + +   ++   C EG+ +KAL    +M+    +P+ +    L+   CR+G +++A   F 
Sbjct: 573 KKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFD 632

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + +G   D +TY  +I+  C+   L +A  + ++M+E+ + PD  TY    T +++  
Sbjct: 633 MLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITY----TVVLDGH 688

Query: 445 RLEEAQKFTSIMVETGKINHQV-VQPNTSKTPE-EIDPSSISYSEKINEHCSQGRYKDAL 502
                +   S+    G    ++   P  S+  E  I P  + Y+  I+ HC     +DA+
Sbjct: 689 SKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAI 748

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +++E   +G+  +  TY  L++    R
Sbjct: 749 NLYDEMIARGLQPDIVTYTALLSSCCSR 776



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 199/448 (44%), Gaps = 21/448 (4%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           +   +ML+  +   GM +EA     + +    +P +++ N L+NR  E G+   A  +  
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
            L   G+ PN  T+ I IK  C++G  ++A  + R MEE G +P+ VT +T I+  C   
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
             +  +  +  +      ++T     ++   C E KL EA  +       G   D   YG
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI  Y +     +A+ L ++M    I  +    ++++  L + G   + +D   E   S
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDS 396

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+  DE  +N ++   C  G+VE+A++  N+M  +    D+V    L++G C +G L  A
Sbjct: 397 GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDA 456

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
              F     +G   D VTYN L+    +    ++A  LL  +  + L P+  T+  I   
Sbjct: 457 KNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEG 516

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
           L  +G+++EA+ F + +                      D    +YS  ++ +C     +
Sbjct: 517 LCMAGKVKEAEAFLNTLE---------------------DKCLENYSAMVDGYCKANFTR 555

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGL 527
            A ++F    ++GI + K +   L++ L
Sbjct: 556 KAYELFSRLSKQGILVKKKSCFKLLSSL 583


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 256/493 (51%), Gaps = 18/493 (3%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D+  Y  +L+ L K       + +L  M ++ +      +  ++  Y + G L++AM+V+
Sbjct: 245 DSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVL 304

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            LM +    P++   N  I+       L++A R  + M  + + P+VVTYN LI  +   
Sbjct: 305 TLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNV 364

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-ENGFSPDCVT 187
            +  +A +LID++   G  P+ V++  ++   C++ ++++  ++++ M+ ++   PD VT
Sbjct: 365 HQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVT 424

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI    K G+ +EA  ++    +   K++ +  + I+H  C E K+ +A  L++   
Sbjct: 425 YNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMF 484

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   D V+Y +++ G+ R  K ++A K+  +M +    P+  TY   + GL ++GK+ 
Sbjct: 485 SKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSL 544

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  M+N   +    P+  T++ ++HG   EG++ +A     +M+ K F P+ V  N+L+
Sbjct: 545 EARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLV 604

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LCR+G   +A +  +  + KG AV+ V + T+I   C++  LE A  LL +M      
Sbjct: 605 HSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKH 664

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  TY A+  AL ++ R+EEA + T  M+  G +                 PS ++Y  
Sbjct: 665 PDTVTYTALIDALAKTDRIEEATELTMKMLRQGLV-----------------PSPVTYRS 707

Query: 488 KINEHCSQGRYKD 500
            I+++C +GR +D
Sbjct: 708 VIHQYCRKGRVED 720



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 247/467 (52%), Gaps = 5/467 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLG 59
           M   GC PD V+Y T++  L +  +LNE+R+L+  M+    L+P+  TYN L+    K G
Sbjct: 377 MPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHG 436

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
              EA+ ++    + +   D   Y+ +++ +C  G +++A  L  EM S    PDVVTY 
Sbjct: 437 HGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYT 496

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++++ F   G+  +A K++ ++ +H  KPNAVT+   +   C+ GK  +A K++   EE 
Sbjct: 497 SVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEE 556

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            ++P+ +TY+ ++    + G + EA  ++  M  KG   N + +N ++H+LC + K  EA
Sbjct: 557 WWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREA 616

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL     +G  ++ V++ T+I G+ + +    AL L D+M      P T TY A+I  
Sbjct: 617 NQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDA 676

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKP 358
           L+++ + E+A ++  ++L+ G++P   T+ ++IH +C +G+VE  L+   KM+ KS F+ 
Sbjct: 677 LAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQ- 735

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                N+++  LC+ G LE+A       +      D+ T + L+ S         A+ + 
Sbjct: 736 --TAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVA 793

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
             M  + L PD      +   LV  G+LEEA +     VE G ++ Q
Sbjct: 794 CRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHVSAQ 840



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 209/414 (50%), Gaps = 1/414 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+    NT +  L    +L +       M   G+ PN  TYN L+ GYC +  
Sbjct: 307 MQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQ 366

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYN 119
           + +AM ++D M      PD  +Y  ++   C    L E   L K+M++  KLLPD VTYN
Sbjct: 367 VDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYN 426

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +LI    + G   EA +++ E ++   K + V ++ ++  YCKEGKI KA ++V  M   
Sbjct: 427 SLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSK 486

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY +++D  C+ G +++A +MM  M +   K N +T  T L+ LC   K  EA
Sbjct: 487 GCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEA 546

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             ++N + +  +  + ++Y  ++ G  R+ K N A  +  EM  +   P+    N ++  
Sbjct: 547 RKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHS 606

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + GK  +A  +L E +  G   +   F T+IHGFC +  +E AL   + M   +  PD
Sbjct: 607 LCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPD 666

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
            VT   L+  L +   +E+A +     + +G     VTY ++I   C++ R+ED
Sbjct: 667 TVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 230/490 (46%), Gaps = 22/490 (4%)

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKS--LPDVWTYNMLINGWCNAGMLEEAFR 101
           + + Y +++    K    + A R++ LMT+ +    P+ + + M+   +  AG L +A +
Sbjct: 245 DSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMV--SYSRAGRLRDAMK 302

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           +   M+   + P++   NT I+         +A +  + +   GI PN VT+N +IK YC
Sbjct: 303 VLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYC 362

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG-LKMNT 220
              ++D+A +++  M   G SPD V+Y T++   C+   + E   ++  M     L  + 
Sbjct: 363 NVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDH 422

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +T N+++  L      DEA  +L  A K  + +D+V Y  ++  Y ++ K  +A +L  E
Sbjct: 423 VTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSE 482

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  +   P   TY +++ G  + GK +QA  M+ ++ +    P+  T+ T ++G C  G+
Sbjct: 483 MFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGK 542

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
             +A +  N   E+ + P+ +T ++++ GL REG L +A    R  I KG   + V  N 
Sbjct: 543 SLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINL 602

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+ SLC++ +  +A  LL E   K    +   +  +     +   LE A      M    
Sbjct: 603 LVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCN 662

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           K                  P +++Y+  I+      R ++A ++  +  ++G+  +  TY
Sbjct: 663 K-----------------HPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTY 705

Query: 521 MNLMNGLIKR 530
            ++++   ++
Sbjct: 706 RSVIHQYCRK 715



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 141/297 (47%), Gaps = 18/297 (6%)

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +L   ++R   L   ++G ++  Y R  +   A+K+   M++  + P+    N  I 
Sbjct: 265 AKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIH 324

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L    + ++A+     ++  G+ P+  T+N +I G+C+  QV++A++  ++M  K   P
Sbjct: 325 ILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSP 384

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDAFGL 417
           D V+   ++  LCR+  L +  +  +      K + D VTYN+LI  L K    ++A  +
Sbjct: 385 DKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEI 444

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L E E+ +   D+  Y+AI  A  + G++++A++  S M   G                 
Sbjct: 445 LQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKG----------------- 487

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            DP  ++Y+  ++  C  G+   A ++ ++  +     N  TY   +NGL +  KS+
Sbjct: 488 CDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSL 544



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 165/360 (45%), Gaps = 19/360 (5%)

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D   Y  +++   K    + A R++ +M R+ +++       ++ +     +L +A 
Sbjct: 242 YRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAM 301

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K G   +     T I       +  +AL+  + M    I P+  TYN +I G 
Sbjct: 302 KVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGY 361

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM-VEKSFKPD 359
               + +QA+++++++   G  PD+ ++ T++   C + ++ +  +   KM  +    PD
Sbjct: 362 CNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPD 421

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            VT N L+  L + G  ++AL+  +        VD V Y+ ++ + CKE +++ A  L+S
Sbjct: 422 HVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVS 481

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  K   PD  TY ++       G+L++A+K    M +                     
Sbjct: 482 EMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYK-----------------HHCK 524

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
           P++++Y+  +N  C  G+  +A ++   + ++    N  TY  +++GL +R   +++A D
Sbjct: 525 PNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGL-RREGKLNEACD 583


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 228/460 (49%), Gaps = 5/460 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD V+Y T++ +L K GK+ E R+L          P+   YN L++G CK   
Sbjct: 207 MSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYT 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA +++D M      P+V +Y  +IN   +AG +E +  +  +M +    P++ T+ +
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  FF  G S EA    D +   G+ PN V +N ++   C +  +  A  +   ME NG
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY+ LID   KAG+++ A  + + M   G   N +    ++  LC     ++AY
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+ +        + V++ T I G     + + A+K++D+M      P+T TYN ++  L
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  +  +A  ++ ++   G+  +  T+NTII+G+C  G + +AL+   KMV +  KPD 
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T NI++   C++G +  A++            D + Y +LIS +C    +E+A   L  
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRR 621

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  + + P+  T+  +   L  +     A +F   ++ +G
Sbjct: 622 MLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 252/552 (45%), Gaps = 57/552 (10%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           +TY  +++ L  + +++ V+ LL  MK +G+  +   +  ++  Y + G  ++A++    
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M   +  P V  YN +++   +    +    +   M+   + P+V TYN L+    ++ R
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A KL+ E+   G  P+ V++  +I   CK GK+ +A ++  +     F+P    YN 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS-----FTPSVPVYNA 251

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  CK    EEAF+++D M  KG+  N I+  TI++ L     ++ +  +L     RG
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  ++ +LI G+F    ++ AL  WD M    ++P+   YNA++ GL        A+
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV--TC----- 363
            + N++  +G  P+  T++ +I G+   G ++ A +  N M+     P++V  TC     
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431

Query: 364 ----------------------------NILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                                       N  + GLC  G ++ A+K F      G   ++
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            TYN L+ SL K+RR  +AFGL+ +ME + +  +  TY  I      +G L EA +    
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           MV  G                   P +I+ +  I+ +C QG+   A+Q+ +         
Sbjct: 552 MVVRGT-----------------KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594

Query: 516 NKSTYMNLMNGL 527
           +   Y +L++G+
Sbjct: 595 DIIAYTSLISGI 606



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 177/353 (50%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  T+ +++   F KG  +E  D    M ++G+VPN   YN L+ G C    L +A
Sbjct: 311 GCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDA 370

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V + M  N   P+V TY+ LI+G+  AG L+ A  +   M +    P+VV Y  +++ 
Sbjct: 371 VSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +    +A+ LI+ +      PN VT N  IK  C  G++D A K+   M  +G  P+
Sbjct: 431 LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPN 490

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN L+D+  K     EAF ++  M  +G+++N +T NTI++  CC   L EA  LL 
Sbjct: 491 TTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLG 550

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG   D ++   +I  Y +  K N A++L D +   +  P    Y ++I G+    
Sbjct: 551 KMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHI 610

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
             E+AI  L  +L  G+ P+  T+N ++    S      A+QF + ++   F+
Sbjct: 611 GVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 207/460 (45%), Gaps = 39/460 (8%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK-LIDELDEHGIKPNAVTHNIM 156
           E F+     +S K  P  +TY  +I +   S R M+  + L+ ++   GI  +      +
Sbjct: 61  EYFKSIANSKSFKHTP--LTYQMMIEKL-ASEREMDCVQYLLQQMKLEGISCSEDLFISV 117

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           I  Y + G  ++A K    M++    P    YN ++DA       +    +   M + G+
Sbjct: 118 IGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGM 177

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + N  T N +L  LC   ++D A+ LL   S +G   DEVSY TLI+   +  K   A +
Sbjct: 178 EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE 237

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L          PS   YNA+I G+ +    E+A  +L+E++  G+ P+  ++ TII+   
Sbjct: 238 L-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G VE +L    KM  +   P++ T   L+ G   +G   +AL F+   I +G   + V
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            YN L+  LC +R L DA  + ++ME     P+  TY+A+     ++G L+ A +  + M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412

Query: 457 VETGKINHQVVQPNTSKTPEEID------------------------PSSISYSEKINEH 492
           +  G        PN       +D                        P++++++  I   
Sbjct: 413 ITHG------CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           C  GR   A+++F++    G   N +TY  L++ L+K R+
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 226/450 (50%), Gaps = 39/450 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   + N +L AL +  +++          ++ + P++ T+NI++SG CK G L++A  V
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210

Query: 68  VDLMTQNKSLPDVWTYNMLING---WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              M     +P V TYN LI+G   W  AG +     L KEM    + P+VVT+N LIN 
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +      A K+ +E+ +HGI  N VT+  ++   C+EGK++ + K+V  MEE G +  
Sbjct: 271 YCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-T 329

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T N++++  CK G M EA   +D M +KG+K N +T NT++       K+ EA     
Sbjct: 330 LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKG 389

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + + +G   D  +Y  LITG+           L DEMKE  +     TYN +I  L   G
Sbjct: 390 AMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKG 449

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A+ +L+E+++ G+ P   T+N II+GFC +G  + A     +M +   + ++VTCN
Sbjct: 450 EVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCN 509

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           + L   C+ G                                   ++++A  +L+EM EK
Sbjct: 510 VFLKYFCKMG-----------------------------------KMDEANVVLNEMLEK 534

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            L P+R TY  I++ ++E G + + + + +
Sbjct: 535 GLVPNRITYEIINSGMIEKGYVPDIRGYAA 564



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 192/365 (52%), Gaps = 24/365 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFK---KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           M G+G +P  VTYNT++D  +K    GK+  V  LL +M + G+ PN  T+N+L++GYCK
Sbjct: 214 MRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCK 273

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL--LPDV 115
              +  A++V + M Q+    ++ TY  L++G C  G +E++ +L +EME L L  LP  
Sbjct: 274 ESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLP-- 331

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            T N+++N F + G  +EA   +D + + G+KPN VT+N +I  Y + GK+ +A      
Sbjct: 332 -TLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGA 390

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M   G SPD  TYN LI     + +      ++D M   G+K + +T N ++  LCC+ +
Sbjct: 391 MAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGE 450

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + +A  LL+   + G      +Y  +I G+     A  A  +   M++ +   +  T N 
Sbjct: 451 VRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNV 510

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
            +    + GK ++A  +LNE+L+ G++P+  T+  I  G                M+EK 
Sbjct: 511 FLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG----------------MIEKG 554

Query: 356 FKPDI 360
           + PDI
Sbjct: 555 YVPDI 559



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 187/421 (44%), Gaps = 21/421 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P   + N L+     + R   A +         + P+  T NI+I   CK G++ KA  +
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210

Query: 173 VRNMEENGFSPDCVTYNTLIDANCK---AGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
            ++M   G  P  VTYNTLID   K   AG M     ++  M + G+  N +T N +++ 
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C E  +  A  +     + G   + V+Y +L++G  R+ K   ++KL +EM+E  +  +
Sbjct: 271 YCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-T 329

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             T N+++ G  + G   +A   ++ + Q GM P+  T+NT+I G+   G++++A     
Sbjct: 330 LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKG 389

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M  K   PD+ T N L++G                    G   D VTYN LI +LC + 
Sbjct: 390 AMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKG 449

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            +  A  LL EM E  L P   TY AI     E G  + A     I +E  K    VV  
Sbjct: 450 EVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDI-RIRMEKCKKRANVVTC 508

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           N                  +   C  G+  +A  +  E  +KG+  N+ TY  + +G+I+
Sbjct: 509 NVF----------------LKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIE 552

Query: 530 R 530
           +
Sbjct: 553 K 553



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 195/416 (46%), Gaps = 30/416 (7%)

Query: 99  AFRLRKEMESLKLLPD---VVTYNTLINRFFESGRSMEAFK--LIDELDEHGIKPNAVTH 153
           A RL      L+ LP     +  + L+     + + + A+   L+   D    +P+A + 
Sbjct: 97  AGRLHSPASILRALPASSRPLVADMLVLALARASQPLAAYGAFLLAGADYPRYRPSAFSV 156

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N ++    +  ++D A +  R       SPD  T+N +I   CK G + +A  +   M  
Sbjct: 157 NALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRG 216

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAY---MLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            GL  + +T NT++       +  + Y   MLL   ++ G   + V++  LI GY ++  
Sbjct: 217 WGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESN 276

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM--IPDETTF 328
              A+K+++EM++  I  +  TY +++ GL + GK E ++ ++ E+ + G+  +P   T 
Sbjct: 277 ITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLP---TL 333

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N++++GFC +G + +A  + + M +K  KP++VT N L+ G  R G +++A     +   
Sbjct: 334 NSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAG 393

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           KG + D  TYN LI+            GLL EM+E  +  D  TY  +  AL   G + +
Sbjct: 394 KGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRK 453

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           A K    MVE G                 ++P   +Y+  IN  C +G  K A  I
Sbjct: 454 AVKLLDEMVEVG-----------------LEPKHRTYNAIINGFCEKGDAKGAHDI 492



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 27/305 (8%)

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL  A    Y     S   L+    R ++ + A + +     R++ P  FT+N +I GL 
Sbjct: 140 LLAGADYPRYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLC 199

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-----EKSF 356
           ++G+  +A D+  ++   G++P   T+NT+I G+   G+  K   +H  M+     +   
Sbjct: 200 KTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGK--MYHVDMLLKEMNQAGI 257

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P++VT N+L++G C+E  +  A+K F      G   + VTY +L+S LC+E ++ED+  
Sbjct: 258 SPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMK 317

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           L+ EMEE  L     T  ++     + G + EA+ +   M + G                
Sbjct: 318 LVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKG---------------- 360

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR--KSI 534
            + P+ ++Y+  I+ +   G+ K+A         KGI+ +  TY  L+ G       +S+
Sbjct: 361 -MKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSV 419

Query: 535 SKAVD 539
           S  +D
Sbjct: 420 SGLLD 424


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 228/453 (50%), Gaps = 4/453 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    N ++  L ++G+  +   ++     +       TY  LV GYC+ G L++A RV
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVEACGPEATA---ATYGALVDGYCRAGLLEDARRV 150

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  M  +      + +N LI+  C  G + +A  +   M      PDVVTYN L+    +
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                +A +LID +   G +PN VT+N++I   C+EG +D+A +++ ++   G  P+ V 
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNT++   C      +A  ++D M R+    N  TLN I++TLC +  L +  + L   S
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   + V+Y  +I+G       + AL+L   M+     P   TYN ++ GL  + + E
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A +++ ++ Q+  +PD +TFNTII  +C +G + +A +   +M EK   P+  T + ++
Sbjct: 391 DAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTII 450

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GL + G +E+AL+       KG   D + Y  L  SL KE ++E+   ++ ++++  + 
Sbjct: 451 GGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGIS 509

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           P    Y  +   L  +G+ + A    + MV  G
Sbjct: 510 PQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCG 542



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 249/511 (48%), Gaps = 24/511 (4%)

Query: 17  LDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKS 76
           L AL  +G L+    L+    +   VP     N LV   C+ G   +A RVV+      +
Sbjct: 71  LSALIHRGDLDAALRLVGSSPRPPDVP---LANRLVRDLCRRGRPADAARVVEACGPEAT 127

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
                TY  L++G+C AG+LE+A R+   M +         +N LI+   E GR  +A  
Sbjct: 128 ---AATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALV 184

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           ++D +   G  P+ VT+NI+++  CK     +A +++  M   G  P+ VTYN +IDA C
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           + G++++A  +++ +  +G K NT+  NT+L   C  ++  +A  +L+   +     +E 
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +   +I    R     +     ++M +     +  TYNA+I G+ + G  + A+++L+ +
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G  PD  T+NT++ G CS  + E A +   KM +    PD  T N ++S  C++G++
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +A + F+    KG   +S TY+T+I  L K  ++E A  LL+EM  K    D+  Y  +
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVL 483

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
             +L +  ++EE  +    + ++G                 I P ++ Y+  +   C  G
Sbjct: 484 TESLNKEDKIEEVVQVVHKLQDSG-----------------ISPQTVLYNTVLLGLCRNG 526

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +   A+ +  +    G   ++STY+ L+ GL
Sbjct: 527 KTDYAIDVLADMVSCGCMPDESTYIILIEGL 557



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 215/410 (52%), Gaps = 1/410 (0%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            +N ++ AL ++G++ +   +L  M  +G  P+  TYNIL+   CK    ++A+ ++D M
Sbjct: 165 AHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFM 224

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P+  TYN++I+  C  G +++A  L   + S    P+ V YNT++  F    R 
Sbjct: 225 RAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERW 284

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           ++A +++DE+      PN  T N++I   C++G + K    +  M ++G + + VTYN +
Sbjct: 285 VDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAV 344

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I   C+ GN++ A  ++  M   G K + +T NT+L  LC   + ++A  L+   S+   
Sbjct: 345 ISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDR 404

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  ++ T+I+ + +     +A +++ +M E+   P++ TY+ +I GL+++GK EQA++
Sbjct: 405 LPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALE 464

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +LNE+   G   D+  +  +      E ++E+ +Q  +K+ +    P  V  N +L GLC
Sbjct: 465 LLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLC 523

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           R G  + A+      +  G   D  TY  LI  L  E   ++A  LLS +
Sbjct: 524 RNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 199/354 (56%), Gaps = 1/354 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+NVTYN I+DA+ ++G +++ R+LL+ +  +G  PN   YN ++ G+C +  
Sbjct: 224 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIER 283

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  ++D M +    P+  T N++IN  C  G+L++     ++M       +VVTYN 
Sbjct: 284 WVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNA 343

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   E G    A +L+  +   G KP+ VT+N ++K  C   + + A +++  M +N 
Sbjct: 344 VISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 403

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+NT+I   C+ G + +AF +   M  KG   N+ T +TI+  L    K+++A 
Sbjct: 404 RLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQAL 463

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN  + +G+  D++ Y  L     +++K    +++  ++++  I P T  YN ++ GL
Sbjct: 464 ELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGL 522

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++GKT+ AID+L +++  G +PDE+T+  +I G   EG  ++A +  +++  +
Sbjct: 523 CRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSR 576



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 189/385 (49%), Gaps = 20/385 (5%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+    N +++  C+ G+   A ++V   E  G      TY  L+D  C+AG +E+A R+
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVV---EACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +  M       +    N ++H LC   ++ +A ++L+    RG   D V+Y  L+    +
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
                +AL+L D M+     P+  TYN +I  + + G  +QA ++LN L   G  P+   
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +NT++ GFCS  +   A +  ++MV ++  P+  T N++++ LCR+G+L+K   +     
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G   + VTYN +IS +C++  ++ A  LLS M+     PD  TY  +   L  + R E
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A++    M +  ++                 P + +++  I+  C +G    A ++F++
Sbjct: 391 DAEELMIKMSQNDRL-----------------PDNSTFNTIISFWCQKGLILQAFEVFKQ 433

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
             +KG   N +TY  ++ GL K  K
Sbjct: 434 MPEKGCNPNSTTYSTIIGGLTKAGK 458



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 34/261 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC  + VTYN ++  + ++G ++   +LLS+M+  G  P+  TYN ++ G C    
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  ++  M+QN  LPD  T+N +I+ WC  G++ +AF + K+M      P+  TY+T
Sbjct: 389 WEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYST 448

Query: 121 LINRFFESGRSMEAFKLIDE----------------------------------LDEHGI 146
           +I    ++G+  +A +L++E                                  L + GI
Sbjct: 449 IIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGI 508

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            P  V +N ++   C+ GK D A  ++ +M   G  PD  TY  LI+     G  +EA  
Sbjct: 509 SPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARE 568

Query: 207 MMDVMGRKGLKMNTITLNTIL 227
           ++  +  + +  N++  N  L
Sbjct: 569 LLSRLCSRDVLSNSLIKNEAL 589


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 221/409 (54%), Gaps = 8/409 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V YNT+L AL + GK+   R+L+++M+     PN  T+NIL+SGYCK G   +A
Sbjct: 205 GVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQA 260

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +++       +PDV +   ++   CNAG   EA  + + +ES+  L DVV YNTLI  
Sbjct: 261 LVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKG 320

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G+       + +++  G  PN  T+N++I  + + G +D A  +  +M+ +G   +
Sbjct: 321 FCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWN 380

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            VT++TLI   C    +E+ F ++++M   ++G + +    N+I++ L  +   DE+   
Sbjct: 381 FVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEF 440

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L        +   V    +I  + +      A +++D+M +   +PS   YN ++ G S+
Sbjct: 441 LTKMGN--LFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSK 498

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G   +A++++NE++ +   P  +TFN +I GFC +G+VE AL+    +  +   P+  T
Sbjct: 499 QGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTET 558

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            + L+  LCR G L+KA++ F   + KG   D   +N+L+ SL +ER  
Sbjct: 559 YSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQERHF 607



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 225/442 (50%), Gaps = 8/442 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D+ T+  ++  L    ++ E   LL  +K +G+ PN   YN L+   C+ G 
Sbjct: 166 MMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGK 225

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  +++ M      P+  T+N+LI+G+C  G   +A  L ++  S+  +PDVV+   
Sbjct: 226 VGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTK 281

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     +GR+MEA ++++ ++  G   + V +N +IK +C  GK+      ++ ME  G
Sbjct: 282 VLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKG 341

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN LI    ++G ++ A  + + M   G+K N +T +T++  LC E+++++ +
Sbjct: 342 CLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGF 401

Query: 241 MLLN--SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            +L     SK G       Y ++I G  +    + + +   +M    + P     + MI 
Sbjct: 402 SILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMG--NLFPRAVDRSLMIL 459

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
              + G  E A  + ++++  G IP    +N ++HGF  +G V +A++  N+M+  +  P
Sbjct: 460 EHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFP 519

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
              T N +++G CR+G +E ALK       +G   ++ TY+ LI  LC+   L+ A  + 
Sbjct: 520 IPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVF 579

Query: 419 SEMEEKKLGPDRYTYAAIHTAL 440
            +M +K + PD + + ++  +L
Sbjct: 580 MQMVDKGILPDLFIWNSLLLSL 601



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 245/558 (43%), Gaps = 61/558 (10%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           TY  ++  L    + + V+ LL +M    G  P    +  ++ G  +    +  ++V+DL
Sbjct: 71  TYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDL 130

Query: 71  MTQNKSLPDVWTYNMLINGWC--NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + +    P +  +N +++     +  M  E +R  K M +  +  D  T+  L+     +
Sbjct: 131 VYKFHGSPSLKIFNSILDVLVKEDIDMAREFYR--KSMMASGVEGDDYTFGILMKGLCLT 188

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            R  E FKL+  +   G+ PN V +N ++   C+ GK+ +A  ++  ME+    P+ VT+
Sbjct: 189 NRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTF 244

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI   CK GN  +A  +++     G   + +++  +L  LC   +  EA  +L     
Sbjct: 245 NILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVES 304

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G  LD V+Y TLI G+    K    L    +M+ +  +P+  TYN +I G S+SG  + 
Sbjct: 305 MGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDL 364

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF-----------------HNKM 351
           A+D+ N++   G+  +  TF+T+I G CSE ++E                      +N +
Sbjct: 365 ALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSI 424

Query: 352 VEKSFK------------------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           +    K                  P  V  ++++   C++G +E A + +   I +G   
Sbjct: 425 IYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIP 484

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
             + YN L+    K+  + +A  L++EM      P   T+ A+ T     G++E A K  
Sbjct: 485 SILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLV 544

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             +   G +      PNT            +YS  I+  C  G  + A+Q+F +   KGI
Sbjct: 545 EDITARGCV------PNTE-----------TYSPLIDVLCRNGDLQKAMQVFMQMVDKGI 587

Query: 514 AINKSTYMNLMNGLIKRR 531
             +   + +L+  L + R
Sbjct: 588 LPDLFIWNSLLLSLSQER 605



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 219/460 (47%), Gaps = 18/460 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLL-SDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           P    +N+ILD L K+  ++  R+     M   G+  +  T+ IL+ G C    + E  +
Sbjct: 138 PSLKIFNSILDVLVKE-DIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFK 196

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++ L+      P+   YN L++  C  G +  A  L  EME     P+ VT+N LI+ + 
Sbjct: 197 LLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYC 252

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G S++A  L+++    G  P+ V+   +++  C  G+  +A +++  +E  G   D V
Sbjct: 253 KEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVV 312

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YNTLI   C AG ++     +  M  KG   N  T N ++        LD A  L N  
Sbjct: 313 AYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDM 372

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ------IMPSTFTYNAMIWGL 300
              G   + V++ TLI G   +E+      + + M+E +      I P    YN++I+GL
Sbjct: 373 KTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISP----YNSIIYGL 428

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +    +++ + L ++    + P     + +I   C +G +E A + +++M+++   P I
Sbjct: 429 LKKNGFDESAEFLTKM--GNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSI 486

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  N L+ G  ++G + +A++     I         T+N +I+  C++ ++E A  L+ +
Sbjct: 487 LVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVED 546

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +  +   P+  TY+ +   L  +G L++A +    MV+ G
Sbjct: 547 ITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKG 586



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 78/147 (53%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           KKG + + + +   M  +G +P+   YN LV G+ K G ++EA+ +++ M  N   P   
Sbjct: 463 KKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPS 522

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           T+N +I G+C  G +E A +L +++ +   +P+  TY+ LI+    +G   +A ++  ++
Sbjct: 523 TFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQM 582

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDK 168
            + GI P+    N ++    +E    K
Sbjct: 583 VDKGILPDLFIWNSLLLSLSQERHFSK 609


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 227/435 (52%), Gaps = 1/435 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +T++ +++A  + G++     LL ++ K G   +      L+ G C  G + EA+ +
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +          D   Y  +ING C  G   +A ++  +M+ +++ P+++ YNT+I+   +
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDCV 186
            G   EA  L  E+ E+GI+ +  ++N MI  +C  G+   A K++  M   G   PD  
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+N LID  CK G + EA+ ++ VM ++G K + ++ N +++  C    + EA  + +  
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + +SY TLI GY +    + A+ L  EM  + ++P T TYN ++ GLS+SG++
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
               D++  +  SG   D  T+N ++  +    + +KAL     ++E    P+I T NIL
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           L GLC+ G L+ A + F+    KG   +  TYN +I  LCKE  L++A  LL +M     
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNY 522

Query: 427 GPDRYTYAAIHTALV 441
            P+  T+  I  A++
Sbjct: 523 LPNYITFDTIVRAIL 537



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 197/403 (48%), Gaps = 19/403 (4%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           IKP+ +T +I+I  + + G++  A  ++ N+ + GF  D     TL+   C  G + EA 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++     +G + + +   TI++ LC   K  +A  +     K   Y + + Y T+I G 
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI-PD 324
            +    + A  L  EM E  I    ++YN+MI G    G+ + A+ +L+E++  G + PD
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             TFN +I G C  G+V +A      M+++ +KPDIV+ N L++G C  G + +A + F 
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             + +    + ++Y TLI+  CK R +++A  LL+EM  K L PD  TY  +   L +SG
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 445 RLEEAQKFTSIMVETGK----INHQVVQPNTSKTPE--------------EIDPSSISYS 486
           R          M  +G+    I + V+  +  K  +               I P+  +Y+
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             ++  C  GR K A +IF+    KG   N  TY  +++GL K
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 163/353 (46%), Gaps = 53/353 (15%)

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P  +T++ LI+A  + G M  AF ++  + + G +++   L T++  LC + ++ EA  L
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+    RG+  DEV YGT+I                                    GL +
Sbjct: 163 LHEYVDRGFRFDEVCYGTIIN-----------------------------------GLCK 187

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GKT  AI M  ++ +  + P+   +NT+I G C +G V++A     +MVE   + D+ +
Sbjct: 188 IGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYS 247

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDAFGLLSEM 421
            N ++ G C  G  + A+K     +++GK   D  T+N LI  LCK  R+ +A+ +++ M
Sbjct: 248 YNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVM 307

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            ++   PD  +Y A+      SG + EA++    MVE   +                 P+
Sbjct: 308 IKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTAL-----------------PN 350

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            ISY   IN +C      +A+ +  E   K +  +  TY  L++GL K  +S+
Sbjct: 351 VISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSL 403



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 70/122 (57%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D +TYN +LD  FK  K ++   L   + + G+ PN  TYNIL+ G CK G 
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK A  +  L++     P++ TYN++I+G C  G L+EA  L  +M +   LP+ +T++T
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531

Query: 121 LI 122
           ++
Sbjct: 532 IV 533


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 231/444 (52%), Gaps = 1/444 (0%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           + GK NE    L  +  +G  P+      L+ G+     LK+AMRV++++ +    PDV+
Sbjct: 74  RAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEIL-ETYGDPDVY 132

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           +YN +I+G+  A  ++ A ++   M S    PDVVTYN +I      G+   AF+++DEL
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            + G KP+ +T+ I+I+    EG+I++A ++   +   G  PD  TYN +I   CK G  
Sbjct: 193 LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A   +  +  +G   + ++ N +L +   + + ++   L+      G   + V++  L
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I+ + R+ +   A+ + + MKE+ + P +++Y+ +I    + G+ + AI+ L +++  G 
Sbjct: 313 ISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD   +NTI+   C  G  + AL    K+ E    P +   N + S L   G   KAL+
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE 432

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
                I KG   D +TYN+LIS LC++  +++A GLL +ME  +  P   ++  +   + 
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC 492

Query: 442 ESGRLEEAQKFTSIMVETGKINHQ 465
           ++ R+ E  +    MVE G + ++
Sbjct: 493 KAHRVFEGIELLITMVEKGCLPNE 516



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 205/405 (50%), Gaps = 35/405 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN ++ +L  +GKL    +++ ++ K G  P+  TY IL+      G 
Sbjct: 157 MRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGR 216

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D +      PD++TYN +I G C  GM + A    + + +    PDVV+YN 
Sbjct: 217 INEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNI 276

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F    R  +  +L+ ++   G +PN VTH+I+I  +C+EG++ +A  ++  M+E G
Sbjct: 277 LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD  +Y+ LI A CK G ++ A   ++ M   G   + +  NTIL TLC         
Sbjct: 337 LTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLC--------- 387

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                            +G           A+ AL +++++ E    P+   YN M   L
Sbjct: 388 ----------------KFGC----------ADLALDVFEKLDEVGCPPTVRAYNTMFSAL 421

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G   +A++M++E+++ G+ PDE T+N++I   C +G V++A+     M    F+P +
Sbjct: 422 WSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTV 481

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           ++ NI+L G+C+   + + ++   + + KG   +  +Y  LI  +
Sbjct: 482 ISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 234/477 (49%), Gaps = 18/477 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L++  C+ G   E++  ++ +      PDV     LI G+ N+  L++A R+ + +E+  
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
             PDV +YN +I+ F ++ +   A ++ D +   G  P+ VT+NIMI   C  GK++ A 
Sbjct: 128 D-PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           +++  + ++G  P  +TY  LI+A    G + EA  + D +  +GL+ +  T N I+  +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C E   D A   +   S RG   D VSY  L+  +    +     +L  +M      P+ 
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            T++ +I    + G+  +A+++L  + + G+ PD  +++ +I  FC EG+++ A+++  K
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           MV     PDIV  N +L+ LC+ G  + AL  F      G       YNT+ S+L     
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
              A  ++SEM  K + PD  TY ++ + L   G ++EA     ++V+      Q     
Sbjct: 427 KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEA---IGLLVDMEATRFQ----- 478

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                    P+ IS++  +   C   R  + +++     +KG   N+++Y+ L+ G+
Sbjct: 479 ---------PTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 190/348 (54%), Gaps = 2/348 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TY  +++A   +G++NE  +L  ++  +GL P+  TYN ++ G CK G    A
Sbjct: 196 GCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRA 255

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +  V  ++     PDV +YN+L+  + N    E+  RL K+M      P+VVT++ LI+ 
Sbjct: 256 LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   GR  EA  +++ + E G+ P++ +++ +I  +CKEG++D A + +  M  +G  PD
Sbjct: 316 FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL-CCEKKLDEAYMLL 243
            V YNT++   CK G  + A  + + +   G        NT+   L  C  K+ +A  ++
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI-KALEMI 434

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   ++G   DE++Y +LI+   RD   + A+ L  +M+  +  P+  ++N ++ G+ ++
Sbjct: 435 SEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKA 494

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
            +  + I++L  +++ G +P+ET++  +I G    G   +A++  N +
Sbjct: 495 HRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 163/339 (48%), Gaps = 18/339 (5%)

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L++ +C+AG   E+   ++ +  KG K + +    ++      + L +A  ++      G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D  SY  +I+G+ +  + + A +++D M+ R   P   TYN MI  L   GK E A 
Sbjct: 128 DP-DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++++ELL+ G  P   T+  +I     EG++ +AL+  +++V +  +PD+ T N ++ G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+EG+ ++AL F R    +G   D V+YN L+ S   + R ED   L+ +M      P+ 
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            T++ + ++    GR+ EA     +M E G                 + P S SY   I+
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKG-----------------LTPDSYSYDPLIS 349

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             C +GR   A++  E+    G   +   Y  ++  L K
Sbjct: 350 AFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 165/323 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN I+  + K+G  +   D +  +  +G  P+  +YNIL+  +      ++ 
Sbjct: 231 GLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDG 290

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R++  M  +   P+V T+++LI+ +C  G + EA  + + M+   L PD  +Y+ LI+ 
Sbjct: 291 ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISA 350

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + GR   A + ++++   G  P+ V +N ++   CK G  D A  +   ++E G  P 
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPT 410

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YNT+  A    GN  +A  M+  M RKG+  + IT N+++  LC +  +DEA  LL 
Sbjct: 411 VRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLV 470

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                 +    +S+  ++ G  +  +    ++L   M E+  +P+  +Y  +I G++ +G
Sbjct: 471 DMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAG 530

Query: 305 KTEQAIDMLNELLQSGMIPDETT 327
              +A+++ N L + G+I  +++
Sbjct: 531 WRAEAMELANSLYRLGVISGDSS 553



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 18/307 (5%)

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
           L  +L+  C   K +E+   L S   +G+  D V    LI G+F      +A+++  E+ 
Sbjct: 65  LMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EIL 123

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           E    P  ++YNAMI G S++ + + A  + + +   G  PD  T+N +I   CS G++E
Sbjct: 124 ETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLE 183

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            A +  +++++   KP ++T  IL+     EG + +AL+ F   + +G   D  TYN +I
Sbjct: 184 LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             +CKE   + A   +  +  +   PD  +Y  +  + +   R E+ ++    MV +G  
Sbjct: 244 RGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG-- 301

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                           +P+ +++S  I+  C +GR ++A+ + E  ++KG+  +  +Y  
Sbjct: 302 ---------------CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDP 346

Query: 523 LMNGLIK 529
           L++   K
Sbjct: 347 LISAFCK 353


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 216/422 (51%), Gaps = 1/422 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  ++  ++    ++GK+ EV  LL+ M + G   +  T  ++V   C+ G  K+ 
Sbjct: 176 GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 235

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
                 M +  + P+V  Y   I+G C    +++AF + +EM    L P+V T+ TLI+ 
Sbjct: 236 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 295

Query: 125 FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G +  AF+L  +L      KPN  T+ +MI  YC+EGK+ +A  ++  M E G  P
Sbjct: 296 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 355

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLI  +CK G+ + AF +M+ M ++G   N  T N ++   C + K+ EAY +L
Sbjct: 356 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 415

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             A+ +G   D+++Y  LIT + +      AL L+D M E    P    Y ++I    Q 
Sbjct: 416 RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQ 475

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + E++    ++ L  G++P + T+ ++I G+C  G+   AL+   +MV+     D +T 
Sbjct: 476 RQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITY 535

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+SGLC+E  LE+A   +   + K      VT  TL    C+  +   A  +L  +++
Sbjct: 536 GALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK 595

Query: 424 KK 425
           ++
Sbjct: 596 RQ 597



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 219/454 (48%), Gaps = 37/454 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G   DN T   ++ +L +KG+  +V +    M + G  PN   Y   + G CK  ++K+
Sbjct: 210 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ 269

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYNTLI 122
           A  V++ M      P+V+T+  LI+G C  G  E AFRL  K ++S    P+V TY  +I
Sbjct: 270 AFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 329

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             +   G+   A  L+  + E G+KPN  T+  +I  +CK G  D+A +++  M++ GF 
Sbjct: 330 GGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 389

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+  TYN +ID  CK G ++EA++++ +   +GLK + IT   ++   C +  +  A  L
Sbjct: 390 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 449

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +   + G   D  +Y +LI+ Y +  +   + K +D+     ++P+  TY +MI G  +
Sbjct: 450 FDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCK 509

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G++  A+ +   ++Q+G   D  T+  +I G C E ++E+A   +  M++K   P  VT
Sbjct: 510 VGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVT 569

Query: 363 CNILLSGLCRE--------------------------------GILEKALKFFRSWILKG 390
              L    CR                                 G ++ A  F +  + + 
Sbjct: 570 RVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDED 629

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            AVD  TY   I+S C E    + + L SEM EK
Sbjct: 630 YAVDHATYTGFINS-CYE---NNRYALASEMSEK 659



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 213/454 (46%), Gaps = 1/454 (0%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++ A  + G+L E  D++ +M+  GL     T N ++    + G    A +V D MT+  
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             PD  ++  L+   C  G +EE   L   M       D  T   ++    E GR  +  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           +    + E G  PN V +   I   CK   + +A  ++  M   G  P+  T+ TLID  
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 196 CKAGNMEEAFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           CK G  E AFR+ + ++     K N  T   ++   C E KL  A MLL    ++G   +
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y TLI G+ +    +RA +L ++MK+   +P+ +TYNA+I G  + GK ++A  +L 
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
                G+  D+ T+  +I   C +G +  AL   ++MVE    PDI     L+S  C++ 
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 476

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +E++ KFF   ++ G      TY ++I+  CK  R   A  +   M +     D  TY 
Sbjct: 477 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 536

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           A+ + L +  RLEEA+     M++   +  +V +
Sbjct: 537 ALISGLCKESRLEEAKALYEGMLDKRLVPCEVTR 570



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF  LP+  TYN ++D   KKGK+ E   +L     QGL  ++ TY IL++ +CK G +
Sbjct: 386 EGF--LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHI 443

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A+ + D M +N   PD+  Y  LI+ +C    +EE+ +   +   + LLP   TY ++
Sbjct: 444 TYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM 503

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  + + GRS  A ++ + + ++G   +++T+  +I   CKE ++++A  +   M +   
Sbjct: 504 IAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL 563

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P  VT  TL    C+      A  ++D + +   +    T++ ++  L     +D A +
Sbjct: 564 VPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK---RQQVHTVDVVVRKLSALGDVDAASL 620

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            L       Y +D  +Y    TG+      N    L  EM E+
Sbjct: 621 FLKKVLDEDYAVDHATY----TGFINSCYENNRYALASEMSEK 659


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 261/534 (48%), Gaps = 51/534 (9%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GK  +   ++ +M   G VP+ +TY+ ++   C    ++ A  +   M     +PDV+TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +LI+ +  AG++++A     EM      P VVTY TLI+ + ++ +   A +L + +  
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC----------------VT 187
            G  PN +T+  +I  YCK G I+KAC+I   M  +   PD                 VT
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CKA  +++A  +++ M   G + NTI  + ++   C   KLDEA  + +   
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +RGY  +  +Y +LI   F+D++ +  LK+  +M E    P+   Y  MI GLS+  KT+
Sbjct: 708 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  ++  + + G  P+  T+  +I GF   G+V+K L+   +M  K   P+ VT  +L+
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK-----ERRLEDAFGLLSEME 422
           +  C  G L++A           + +    +   +SS CK     +R    + GLL E+E
Sbjct: 828 NHCCATGHLDEAYALL-------EEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVE 880

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +    P    Y  +    V++GRLE A           +++ +V+  + S T ++   +S
Sbjct: 881 KNGSAPTILLYKVLIDNFVKAGRLEVAL----------ELHKEVISASMSMTAKKNLYTS 930

Query: 483 I----SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +    SY+ KI+          A ++F +  + G+  +  T+++L+ GLI+ R+
Sbjct: 931 LIYSFSYASKIDH---------AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRR 975



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 258/600 (43%), Gaps = 78/600 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P  +TYN ++    +  KL+  + +  +M + GL  +  T        CK+G 
Sbjct: 232 LKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK 291

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ +++   +   +P+   YN +I+G C A   EEA      M S   +P+V TY  
Sbjct: 292 WREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI 348

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+       +     +++  +   G  P+    N ++  YCK      A K+++ ME+  
Sbjct: 349 LLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408

Query: 181 FSPDCVTYNTLIDANCKAGNM------EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             P  V YN LI + C  G +      E A +  + M   G  +N + + +    LC   
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K ++AY +++     G+  D  +Y  +I       +   A  L+ EMK   ++P  +TY 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH--------------------- 333
            +I   S++G  +QA + L+E+++ G  P   T+ T+IH                     
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 334 --------------GFCSEGQVEKALQFHNKM--------VEKSF--------KPDIVTC 363
                         G+C  G +EKA Q + +M        V+  F        KP++VT 
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GLC+   ++ A     +  + G   +++ Y+ LI   CK  +L++A  +  +M E
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ-------PNTSKTPE 476
           +   P+ YTY+++   L +  RL+   K  S M+E     + V+           +KT E
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768

Query: 477 E-----------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                         P+ ++Y+  I+     G+    L++F E   KG A N  TY  L+N
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 175/348 (50%), Gaps = 4/348 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY  ++D L K  K+ + RDLL  M   G  PN   Y+ L+ G+CK   L EA  V
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +    P+V+TY+ LI+       L+   ++  +M      P++V Y  +I+   +
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             ++ EA+KL+  ++E G KPN VT+  MI  + K GK+DK  ++ R M   G +P+ VT
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LI+  C  G+++EA+ +++ M +     +  +   ++     +++   +  LL    
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVE 880

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAMIWGLSQSGK 305
           K G     + Y  LI  + +  +   AL+L  E+      +      Y ++I+  S + K
Sbjct: 881 KNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASK 940

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
            + A ++  ++++ G+IPD  TF  ++ G     + E+ALQ  + + +
Sbjct: 941 IDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQ 988



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 177/417 (42%), Gaps = 26/417 (6%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI +   +G    A + +  L + G KP  +T+N +++ + +  K+D A  + R M E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G S D  T      A CK G   EA  +++   ++    NTI  N ++  LC     +E
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEE 326

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   LN         +  +Y  L+ G    ++  R  ++   M      PS   +N+++ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF------HNKMV 352
              +S     A  +L ++ +    P    +N +I   CS G++   + F      +N+M+
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                 + V        LC  G  EKA K     +  G   D+ TY+ +I  LC   R+E
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +AF L  EM+   + PD YTY  +     ++G +++A  +   MV  G            
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG------------ 554

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 +P+ ++Y+  I+ +    +   A ++FE    KG   N  TY  L++G  K
Sbjct: 555 -----CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 262/543 (48%), Gaps = 62/543 (11%)

Query: 15  TILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW-LKEAMRVVDLMTQ 73
            +L+   +   + E   LLS +     V +  +YNI+++  C+ G  L++A+ ++  M++
Sbjct: 49  ALLNRRLRAAPVTEACSLLSALPD---VRDAVSYNIVLAALCRRGGDLRQALSLLADMSR 105

Query: 74  NK---SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
                + P+  +Y M++ G C +   +EA  L + M++  +  DVVTY TLI    ++  
Sbjct: 106 EAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAE 165

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A +L+ E+   G+ PN + ++ +++ YC+ G+     K+   M   G  PD + +  
Sbjct: 166 LDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTG 225

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
            ID  CK G + +A ++ D+M ++GL+ N +T N +++ LC E  + EA  L N    +G
Sbjct: 226 FIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKG 285

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM--PSTFTYNAMIWGLSQSGKTEQ 308
              D V+Y TLI G     + + A+ L +EM +   +  P   T+N++I GL + G+  Q
Sbjct: 286 VAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQ 345

Query: 309 AI-----------------------------------DMLNELLQSGMIPDETTFNTIIH 333
           AI                                   ++++EL+ SG+ PD  T++ +I+
Sbjct: 346 AISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILIN 405

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           GF    +V++A  F   M ++  + ++     LL+ LC+ G++E+A+  F    +    +
Sbjct: 406 GFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNC-GL 464

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D+V Y+T++   CK   ++ A  LL +M ++ L PD  TY+ +     + G LEEA++  
Sbjct: 465 DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVL 524

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M  +G +                 P    +   I  + ++G+    L +  E R K +
Sbjct: 525 KQMAASGFV-----------------PDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNV 567

Query: 514 AIN 516
           AI+
Sbjct: 568 AID 570



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 224/428 (52%), Gaps = 3/428 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V+Y  ++  L    + +E   LL  M+  G+  +  TY  L+ G C    L  A+ +
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M  +   P+V  Y+ L+ G+C +G  ++  ++ +EM  L + PDV+ +   I+   +
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A K+ D + + G++PN VT+N++I   CKEG + +A  +   M++ G +PD VT
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292

Query: 188 YNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           YNTLI        M+ A  +++ M  G   ++ + +T N+++H LC   ++ +A  +   
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            ++RG   + V+Y  LI G+ R  K N A+ L  E+    + P +FTY+ +I G S+  +
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A   L  + Q G+  +   +  ++   C  G +E+A+   N+M + +   D V  + 
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYST 471

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ G C+ G ++ A +  +  + +G A D+VTY+ LI+   K   LE+A  +L +M    
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531

Query: 426 LGPDRYTY 433
             PD   +
Sbjct: 532 FVPDVAVF 539



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 215/432 (49%), Gaps = 5/432 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VTY T++  L    +L+   +LL +M   G+ PN   Y+ L+ GYC+ G 
Sbjct: 141 MQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGR 200

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++  +V + M++    PDV  +   I+  C  G + +A +++  M    L P+VVTYN 
Sbjct: 201 WQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNV 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   + G   EA  L +E+D+ G+ P+ VT+N +I       ++D A  ++  M +  
Sbjct: 261 LINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGD 320

Query: 181 --FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
               PD VT+N++I   CK G M +A  + ++M  +G   N +T N ++       K++ 
Sbjct: 321 TLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNM 380

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L++     G   D  +Y  LI G+ +  + +RA      M +R I    F Y  ++ 
Sbjct: 381 AMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLA 440

Query: 299 GLSQSGKTEQAIDMLNEL-LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            L Q G  EQA+ + NE+ +  G+  D   ++T+++G C  G ++ A Q    M+++   
Sbjct: 441 ALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLA 498

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD VT +IL++   + G LE+A +  +     G   D   +++LI     E ++     L
Sbjct: 499 PDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDL 558

Query: 418 LSEMEEKKLGPD 429
           + EM  K +  D
Sbjct: 559 IHEMRAKNVAID 570



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 182/374 (48%), Gaps = 26/374 (6%)

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK-AGNMEEAFRMMDVMGRKG---LK 217
           +   + +AC ++  + +     D V+YN ++ A C+  G++ +A  ++  M R+     +
Sbjct: 56  RAAPVTEACSLLSALPD---VRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAAR 112

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N ++   ++  LC  ++ DEA  LL S    G   D V+YGTLI G     + + AL+L
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             EM    + P+   Y+ ++ G  +SG+ +    +  E+ + G+ PD   F   I   C 
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           +G++ KA++  + MV++  +P++VT N+L++ LC+EG + +AL        KG A D VT
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKK--LGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           YNTLI+ L     ++ A GLL EM +    + PD  T+ ++   L + GR+ +A     +
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M E G + + V                 +Y+  I       +   A+ +  E    G+  
Sbjct: 353 MAERGCMCNLV-----------------TYNYLIGGFLRVHKVNMAMNLMSELISSGLEP 395

Query: 516 NKSTYMNLMNGLIK 529
           +  TY  L+NG  K
Sbjct: 396 DSFTYSILINGFSK 409



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 22/184 (11%)

Query: 359 DIVTCNILLSGLCREG-ILEKALKFFRSWILKGKAV---DSVTYNTLISSLCKERRLEDA 414
           D V+ NI+L+ LCR G  L +AL        +       ++V+Y  ++  LC  RR ++A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL  M+   +  D  TY  +   L ++  L+ A +    M  +G              
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSG-------------- 180

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              + P+ I YS  +  +C  GR++D  ++FEE  + G+  +   +   ++ L K+ + I
Sbjct: 181 ---VHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGR-I 236

Query: 535 SKAV 538
            KAV
Sbjct: 237 GKAV 240


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 233/454 (51%), Gaps = 1/454 (0%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++++  + G+L E  +++ +M  QGLVPN  T N ++    ++G ++ A  + + M    
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             PD  +Y +++  +C  G + EA +    M     + D  T+  +I+RF   G +  A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
                L + G++PN +    MI+  CK G I +A +++  M   G+ P+  T+ +LID  
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 196 CKAGNMEEAFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           CK G  E+AFR+ + ++  +  K N +T   ++   C E KL+ A MLL+   ++G   +
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y TLI G+ +     RA  L + M      P+  TYNA++ GL + G+ ++A  ML 
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           +  Q+G+ PD+ T+N ++   C +  + +AL   NKM++   +PDI +   L++  CRE 
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            ++++  FF   +  G    + TY ++I   C+E  L  A      + +    PD  TY 
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYG 560

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
           AI + L +  + +EA+     M+E G +  +V +
Sbjct: 561 AIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTR 594



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 223/410 (54%), Gaps = 13/410 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD+++Y  ++    K G + E    LS M ++G V +  T+ +++S +   G+   A
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259

Query: 65  M----RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +    R+VD+  +    P++  +  +I G C  G +++AF + +EM      P+V T+ +
Sbjct: 260 LWYFRRLVDMGLE----PNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTS 315

Query: 121 LINRFFESGRSMEAFKLIDEL---DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           LI+   + G + +AF+L  +L   + H  KPN +T+  MI  YC+E K+++A  ++  M+
Sbjct: 316 LIDGLCKKGWTEKAFRLFLKLVRSENH--KPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E G  P+  TY TLID +CKAGN E A+ +M++M  +G   N  T N I++ LC   ++ 
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EAY +L    + G   D+ +Y  L++ + + E   +AL L+++M +  I P   +Y  +I
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 493

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               +  + +++     E ++ G+IP   T+ ++I G+C EG +  A++F +++ +    
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
           PD +T   ++SGLC++   ++A   + S I KG     VT  TL    CK
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 234/474 (49%), Gaps = 18/474 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           +V  + ++G LKEA+ +V  M     +P+  T N +I      G++E A  L +EM    
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + PD ++Y  ++  + + G  +EA K +  + E G   +  T  ++I  +  +G   +A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
              R + + G  P+ + +  +I+  CK G++++AF M++ M  KG K N  T  +++  L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 231 CCEKKLDEAY-MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           C +   ++A+ + L       +  + ++Y  +I+GY R++K NRA  L   MKE+ ++P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           T TY  +I G  ++G  E+A D++N +   G  P+  T+N I++G C  G+V++A +   
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
              +   KPD  T NIL+S  C++  + +AL  F   +  G   D  +Y TLI+  C+E 
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R++++     E     + P   TY ++       G L  A KF   + + G         
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHG--------- 551

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                     P SI+Y   I+  C Q +  +A  +++   +KG+   + T + L
Sbjct: 552 --------CAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITL 597



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 193/410 (47%), Gaps = 18/410 (4%)

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  F E GR  EA +++ E+   G+ PN  T N +IK   + G ++ A  +   M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD ++Y  ++   CK GN+ EA + + VM  +G  ++  T   I+     +     A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G   + +++  +I G  +     +A ++ +EM  +   P+ +T+ ++I GL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 301 SQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + G TE+A  +  +L++S    P+  T+  +I G+C E ++ +A    ++M E+   P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T   L+ G C+ G  E+A         +G + +  TYN +++ LCK  R+++A+ +L 
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           +  +  L PD++TY  + +   +   + +A    + M++ G                 I 
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIG-----------------IQ 483

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           P   SY+  I   C + R K++   FEE  + GI     TY +++ G  +
Sbjct: 484 PDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCR 533



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 169/360 (46%), Gaps = 33/360 (9%)

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           +KAC+++R M E+ FS              + G ++EA  M+  M  +GL  NT TLN I
Sbjct: 132 EKACEVMRCMVES-FS--------------EVGRLKEAVEMVIEMHNQGLVPNTRTLNWI 176

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +        ++ A +L      RG   D +SY  ++  Y +      A K    M ER  
Sbjct: 177 IKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGF 236

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           +    T+  +I   S  G T +A+     L+  G+ P+   F  +I G C  G +++A +
Sbjct: 237 VVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFE 296

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL-KGKAVDSVTYNTLISSL 405
              +MV K +KP++ T   L+ GLC++G  EKA + F   +  +    + +TY  +IS  
Sbjct: 297 MLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGY 356

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C+E +L  A  LLS M+E+ L P+  TY  +     ++G  E A    ++M         
Sbjct: 357 CREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLM--------- 407

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                   + E   P+  +Y+  +N  C +GR ++A ++ E+  Q G+  +K TY  LM+
Sbjct: 408 --------SSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMS 459



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 2/196 (1%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF   P+  TYN I++ L K+G++ E   +L D  + GL P++ TYNIL+S +CK   +
Sbjct: 410 EGFS--PNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENI 467

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           ++A+ + + M +    PD+ +Y  LI  +C    ++E+    +E   + ++P   TY ++
Sbjct: 468 RQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSM 527

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  +   G    A K    L +HG  P+++T+  +I   CK+ K D+A  +  +M E G 
Sbjct: 528 ICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587

Query: 182 SPDCVTYNTLIDANCK 197
            P  VT  TL    CK
Sbjct: 588 VPCEVTRITLAYEYCK 603


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 227/447 (50%), Gaps = 29/447 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT+NT+L  L  + +++E  DL   M K    PN  T+  L++G C+ G + E
Sbjct: 44  LGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVE 99

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLI 122
           A+ ++D M ++   P+  TY  +++G C  G    A  L ++ME L  + PDVV Y+ +I
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +  ++ GR  +A  L  E+ + GI P+ VT++ MI  +C  GK  +A ++++ M     S
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT++ LI+A  K G++  A  ++  M   G+  N +T NT+L  LC   KL +A  +
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
             +  K                   D  A  A           + P   TYN +I GL  
Sbjct: 280 FKAMQKS----------------MMDIDATHAFN--------GVEPDVQTYNILISGLIN 315

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK  +A ++  E+   G++PD  T++++I+G C + ++++A Q  + M  KSF P+IVT
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVT 375

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L++G C+ G+++  L+ F     +G   +++TY TLI    K   +  +  +  EM 
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA 449
              + PD  T   + T L     L++A
Sbjct: 436 SSGVYPDTITIRNMLTGLWSKEELKKA 462



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 226/462 (48%), Gaps = 35/462 (7%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++N+LI  +C+   L  A     ++  L   P +VT+NTL++      R  EA  L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++     KPN VT   ++   C+EG++ +A  ++  M E+G  P+ +TY T++D  CK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +K + +  + I+  L  + +  +A  L      +G + D V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  +I G+    K + A +L  EM  R+I P   T++ +I  L + G    A D+L E++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF------------KPDIVTCNI 365
            SG+ P+  T NT++ G C  G+++ AL+    M +KS             +PD+ T NI
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAFNGVEPDVQTYNI 308

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+SGL  EG   +A + +     +G   D+VTY+++I+ LCK+ RL++A  +   M  K 
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  T+  + T   ++G +++  +   +  E G+                I  ++I+Y
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLE---LFCEMGR--------------RGIVANAITY 411

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              I      G    +L IF+E    G+  +  T  N++ GL
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 198/387 (51%), Gaps = 47/387 (12%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T+++ L ++G++ E   LL  M + GL PN+ TY  +V G CK+G    A+
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 66  RVVDLM-----------------------------------TQNKSL-PDVWTYNMLING 89
            ++  M                                    Q+K + PD+ TY+ +ING
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +C++G   EA RL +EM   K+ PDVVT++ LIN   + G    A  L+ E+   G+ PN
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEE-----------NGFSPDCVTYNTLIDANCKA 198
            VT N ++   C  GK+  A ++ + M++           NG  PD  TYN LI      
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G   EA  + + M  +G+  +T+T +++++ LC + +LDEA  + +S   + +  + V++
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TLITGY +    +  L+L+ EM  R I+ +  TY  +I G  + G    ++D+  E++ 
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKAL 345
           SG+ PD  T   ++ G  S+ +++KAL
Sbjct: 437 SGVYPDTITIRNMLTGLWSKEELKKAL 463



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 212/446 (47%), Gaps = 36/446 (8%)

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
             L++  D+ ++N LI  F    +   A     +L + G  P  VT N ++   C E ++
Sbjct: 7   HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            +A  +   M +    P+ VT+ TL++  C+ G + EA  ++D M   GL+ N IT  TI
Sbjct: 67  SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYY-LDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +  +C       A  LL    +  +   D V Y  +I G ++D +   A  L+ EM+++ 
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I P   TY+ MI G   SGK  +A  +L E+L   + PD  TF+ +I+    EG +  A 
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW-----------ILKGKAVD 394
               +M+     P++VTCN LL GLC  G L+ AL+ F++               G   D
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFT 453
             TYN LIS L  E +  +A  L  EM  + + PD  TY+++   L +  RL+EA Q F 
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           S+                    +   P+ ++++  I  +C  G   D L++F E  ++GI
Sbjct: 363 SM------------------GSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404

Query: 514 AINKSTYMNLMNGLIKRRKSISKAVD 539
             N  TY+ L+ G  ++  +I+ ++D
Sbjct: 405 VANAITYITLIRGF-RKVGNINGSLD 429



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 233/491 (47%), Gaps = 35/491 (7%)

Query: 33  LSDMKKQGL-VP-NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           +S+  K GL +P +  ++NIL+  +C    L  A+     +T+    P + T+N L++G 
Sbjct: 1   MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C    + EA  L  +M      P+VVT+ TL+N     GR +EA  L+D + E G++PN 
Sbjct: 61  CVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           +T+  ++   CK G    A  ++R MEE +   PD V Y+ +ID   K G   +A  +  
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M  KG+  + +T + +++  C   K  EA  LL     R    D V++  LI    ++ 
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS---------- 319
             N A  L  EM    + P+  T N ++ GL  SGK + A++M   + +S          
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296

Query: 320 -GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G+ PD  T+N +I G  +EG+  +A + + +M  +   PD VT + +++GLC++  L++
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A + F S   K  + + VT+NTLI+  CK   ++D   L  EM  + +  +  TY  +  
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
              + G +  +      M+ +G                 + P +I+    +    S+   
Sbjct: 417 GFRKVGNINGSLDIFQEMISSG-----------------VYPDTITIRNMLTGLWSKEEL 459

Query: 499 KDALQIFEETR 509
           K AL + EE +
Sbjct: 460 KKALAMLEELQ 470



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 11/323 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V Y+ I+D L+K G+  + ++L  +M+ +G+ P+  TY+ +++G+C  G   EA R+
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M   K  PDV T++ LIN     G L  A  L +EM S  + P+VVT NTL++   +
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 128 SGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           SG+   ++E FK +     ++D     +G++P+  T+NI+I     EGK  +A ++   M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G  PD VTY+++I+  CK   ++EA +M D MG K    N +T NT++   C    +
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+   L     +RG   + ++Y TLI G+ +    N +L ++ EM    + P T T   M
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 297 IWGLSQSGKTEQAIDMLNELLQS 319
           + GL    + ++A+ ML EL  S
Sbjct: 450 LTGLWSKEELKKALAMLEELQMS 472



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 95/174 (54%), Gaps = 2/174 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  TYN ++  L  +GK  E  +L  +M  +G+VP+  TY+ +++G CK   L EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ D M      P++ T+N LI G+C AGM+++   L  EM    ++ + +TY TLI  
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVT-HNIMIKWYCKEGKIDKACKIVRNME 177
           F + G    +  +  E+   G+ P+ +T  N++   + KE ++ KA  ++  ++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELKKALAMLEELQ 470


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 246/507 (48%), Gaps = 16/507 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY T +  L K G       L+ ++ ++    N   +N ++ G C+ G L EA  V
Sbjct: 243 PNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEV 302

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M  +  LPDV++Y++LI+G+C  G +++A  + KEM +  +LP++ +Y+ LI+ F +
Sbjct: 303 FKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCK 362

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A ++ +E+   GI P+  +++I+I  +C++G +D A K    M  N FSP    
Sbjct: 363 EGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFN 422

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +LI    K+     A +   +M + G+  +TI  N IL   C +   ++A  L     
Sbjct: 423 YCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQ 482

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G + +  SY   I    R     +AL+L   M +R ++P    Y+ +I   ++   +E
Sbjct: 483 ENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSE 542

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +  ++ + G+  +  T+  +I+ F S+ +++ A +    M E    PD +    L+
Sbjct: 543 KAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLV 602

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +G C  G + +A   F     +G + + VTY   I+   K  +   A  L  +M+E+ + 
Sbjct: 603 AGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVY 662

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD+  Y  +  A   +G +  A+     M + G+                  P+ + Y+ 
Sbjct: 663 PDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCT----------------PNVVMYTC 706

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIA 514
            IN +    +   A +++EE R KG++
Sbjct: 707 LINSYIKLNKRDQAEKLYEEMRAKGLS 733



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 225/429 (52%), Gaps = 5/429 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LPD  +Y+ ++D   +KG++++  ++  +M+  G++PN  +Y+IL+ G+CK G 
Sbjct: 306 MKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGR 365

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ V + M  +  LPDV++Y++LI+G+C  G ++ A +  +EM S    P    Y +
Sbjct: 366 VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCS 425

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  +++S +   A K    + + G+ P+ +  N ++  YC++   +KA  +    +ENG
Sbjct: 426 LIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENG 485

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL--DE 238
              +  +YN  I   C+    E+A +++ VM ++ +  + +  +T++   C  K+L  ++
Sbjct: 486 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEK 543

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ML    +K G   +  +Y  LI  +  D K + A +L+  MKE ++ P    Y +++ 
Sbjct: 544 AVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVA 603

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G   +G+  +A  + +E+ + G  P+  T+   I+ +    +  +A + + KM E+   P
Sbjct: 604 GFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYP 663

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT-YNTLISSLCKERRLEDAFGL 417
           D +   +L++  C  G + +A   F     +G+   +V  Y  LI+S  K  + + A  L
Sbjct: 664 DQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKL 723

Query: 418 LSEMEEKKL 426
             EM  K L
Sbjct: 724 YEEMRAKGL 732



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 231/511 (45%), Gaps = 61/511 (11%)

Query: 82  TYNMLINGWCNAGMLEEA--FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
            ++MLI  + +  MLE A    +R + + ++L  ++++ N L+    E  R      L +
Sbjct: 138 VFDMLIKVFASNSMLEHANYVFVRAKDDGIEL--NIMSCNFLLKCLVEDNRVDGVRLLFE 195

Query: 140 ELDEHGIKPNAVTHNIMIKWYCK----EGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L + G +PN  T+ IM+ ++C+       I +A +I+  +  +G +P+ VTY T I   
Sbjct: 196 VLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGL 255

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK G    A+R++  + RK   +N    N +++ LC    LDEA  +       G   D 
Sbjct: 256 CKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV 315

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
            SY  LI G+ R  + ++A +++ EM+   I+P+ ++Y+ +I G  + G+ ++A+++  E
Sbjct: 316 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 375

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP----------------- 358
           +  SG++PD  +++ +I GFC +G ++ A++F  +M   +F P                 
Sbjct: 376 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQ 435

Query: 359 ------------------DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
                             D + CN +LS  CR+    KAL     +   G   +  +YN 
Sbjct: 436 FANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNE 495

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            I  +C+    E A  LL  M ++ + PD   Y+ + +   +    E+A      M + G
Sbjct: 496 FIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVG 555

Query: 461 ---KINHQVVQPNTSKTPEEID---------------PSSISYSEKINEHCSQGRYKDAL 502
               +    +  N   +  ++D               P  I+Y+  +   C+ G    A 
Sbjct: 556 ITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRAR 615

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            +F+E  ++G + N  TY   +N  +K  K+
Sbjct: 616 ALFDEMSREGCSPNVVTYTCFINEYLKLNKN 646



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 118/231 (51%), Gaps = 1/231 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD V Y+T++    K+    +   L   M K G+  N  TY IL++ +     +  A R
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M +++  PD   Y  L+ G+CN G +  A  L  EM      P+VVTY   IN + 
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 641

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG-FSPDC 185
           +  ++ +A KL +++ E G+ P+ + + ++I  +C  G++++A  +   M++ G  +P+ 
Sbjct: 642 KLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNV 701

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           V Y  LI++  K    ++A ++ + M  KGL     +  ++  + CC  ++
Sbjct: 702 VMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQV 752



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 1/166 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD + Y +++      G++   R L  +M ++G  PN  TY   ++ Y KL    +A ++
Sbjct: 593 PDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKL 652

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFF 126
            + M +    PD   Y MLI  +CN G +  A  L  EM +  +  P+VV Y  LIN + 
Sbjct: 653 YEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYI 712

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           +  +  +A KL +E+   G+     +   + + +C   ++ K  K+
Sbjct: 713 KLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKTGKL 758


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 226/447 (50%), Gaps = 29/447 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT+NT+L  L  + +++E  DL   M K    PN  T+  L++G C+ G + E
Sbjct: 44  LGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVE 99

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLI 122
           A+ ++D M ++   P+  TY  +++G C  G    A  L ++ME L  + PDVV Y+ +I
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +  ++ GR  +A  L  E+ + GI P+ VT++ MI  +C  GK  +A ++++ M     S
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT++ LI+A  K G++  A  ++  M   G+  N +T NT+L  LC   KL +A  +
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
             +  K                   D  A  A           + P   TYN +I GL  
Sbjct: 280 FKAMQKS----------------MMDIDATHAFN--------GVEPDVQTYNILISGLIN 315

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK  +A ++  E+   G++PD  T++++I+G C + ++++A Q  + M  KSF P+IVT
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVT 375

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L++G C+ G+++  L+ F     +G   +++TY TLI    K   +  +  +  EM 
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI 435

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEA 449
              + PD  T   + T L     L+ A
Sbjct: 436 SSGVYPDTITIRNMLTGLWSKEELKRA 462



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 226/462 (48%), Gaps = 35/462 (7%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++N+LI  +C+   L  A     ++  L   P +VT+NTL++      R  EA  L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
            ++     KPN VT   ++   C+EG++ +A  ++  M E+G  P+ +TY T++D  CK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 199 GNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           G+   A  ++  M     +K + +  + I+  L  + +  +A  L      +G + D V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  +I G+    K + A +L  EM  R+I P   T++ +I  L + G    A D+L E++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF------------KPDIVTCNI 365
            SG+ P+  T NT++ G C  G+++ AL+    M +KS             +PD+ T NI
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAFNGVEPDVQTYNI 308

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+SGL  EG   +A + +     +G   D+VTY+++I+ LCK+ RL++A  +   M  K 
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  T+  + T   ++G +++  +   +  E G+                I  ++I+Y
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLE---LFCEMGR--------------RGIVANAITY 411

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              I      G    +L IF+E    G+  +  T  N++ GL
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 212/446 (47%), Gaps = 36/446 (8%)

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
             L++  D+ ++N LI  F    +   A     +L + G  P  VT N ++   C E ++
Sbjct: 7   HGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRV 66

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            +A  +   M +    P+ VT+ TL++  C+ G + EA  ++D M   GL+ N IT  TI
Sbjct: 67  SEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYY-LDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +  +C       A  LL    +  +   D V Y  +I G ++D +   A  L+ EM+++ 
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I P   TY+ MI G   SGK  +A  +L E+L   + PD  TF+ +I+    EG +  A 
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW-----------ILKGKAVD 394
               +M+     P++VTCN LL GLC  G L+ AL+ F++               G   D
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFT 453
             TYN LIS L  E +  +A  L  EM  + + PD  TY+++   L +  RL+EA Q F 
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
           S+                    +   P+ ++++  I  +C  G   D L++F E  ++GI
Sbjct: 363 SM------------------GSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404

Query: 514 AINKSTYMNLMNGLIKRRKSISKAVD 539
             N  TY+ L+ G  ++  +I+ ++D
Sbjct: 405 VANAITYITLIRGF-RKVGNINGSLD 429



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 222/453 (49%), Gaps = 24/453 (5%)

Query: 33  LSDMKKQGL-VP-NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           +S+  K GL +P +  ++NIL+  +C    L  A+     +T+    P + T+N L++G 
Sbjct: 1   MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C    + EA  L  +M      P+VVT+ TL+N     GR +EA  L+D + E G++PN 
Sbjct: 61  CVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEE-NGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
           +T+  ++   CK G    A  ++R MEE +   PD V Y+ +ID   K G   +A  +  
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M  KG+  + +T + +++  C   K  EA  LL     R    D V++  LI    ++ 
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS---------- 319
             N A  L  EM    + P+  T N ++ GL  SGK + A++M   + +S          
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296

Query: 320 -GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G+ PD  T+N +I G  +EG+  +A + + +M  +   PD VT + +++GLC++  L++
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A + F S   K  + + VT+NTLI+  CK   ++D   L  EM  + +  +  TY  +  
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
              + G +  +      M+ +G      V P+T
Sbjct: 417 GFRKVGNINGSLDIFQEMISSG------VYPDT 443



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 198/387 (51%), Gaps = 47/387 (12%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T+++ L ++G++ E   LL  M + GL PN+ TY  +V G CK+G    A+
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 66  RVVDLM-----------------------------------TQNKSL-PDVWTYNMLING 89
            ++  M                                    Q+K + PD+ TY+ +ING
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +C++G   EA RL +EM   K+ PDVVT++ LIN   + G    A  L+ E+   G+ PN
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEE-----------NGFSPDCVTYNTLIDANCKA 198
            VT N ++   C  GK+  A ++ + M++           NG  PD  TYN LI      
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G   EA  + + M  +G+  +T+T +++++ LC + +LDEA  + +S   + +  + V++
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            TLITGY +    +  L+L+ EM  R I+ +  TY  +I G  + G    ++D+  E++ 
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKAL 345
           SG+ PD  T   ++ G  S+ ++++AL
Sbjct: 437 SGVYPDTITIRNMLTGLWSKEELKRAL 463



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 11/323 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V Y+ I+D L+K G+  + ++L  +M+ +G+ P+  TY+ +++G+C  G   EA R+
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M   K  PDV T++ LIN     G L  A  L +EM S  + P+VVT NTL++   +
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 128 SGR---SMEAFKLID----ELDE----HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           SG+   ++E FK +     ++D     +G++P+  T+NI+I     EGK  +A ++   M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G  PD VTY+++I+  CK   ++EA +M D MG K    N +T NT++   C    +
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+   L     +RG   + ++Y TLI G+ +    N +L ++ EM    + P T T   M
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 297 IWGLSQSGKTEQAIDMLNELLQS 319
           + GL    + ++A+ ML EL  S
Sbjct: 450 LTGLWSKEELKRALAMLEELQMS 472


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 235/454 (51%), Gaps = 1/454 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P +VTY  ++    ++G   +  +L   M+  GL+P+   +N+++ G       K+A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   M  +  +PD +TYN+LI+  C    + EA  L ++M    + P +VTY++L+  
Sbjct: 372 VSLFKEMA-DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G   EA KL  E+   G  PN VT+  ++K +  +   DKA  ++  M++NG S +
Sbjct: 431 YCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYNTLI+  C  G + E   M+     +G     +T N+I++       +  A+ +  
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   + V+Y + I GY +    + ALK+ ++++ + + P    YN++I+G  Q G
Sbjct: 551 QMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEG 610

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A+ +L  +L+ G++P+ + +N+ I G+ +   +E+AL+ + KM+++    D  T  
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYT 670

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G  ++G +  ALK +   + KG   D +T+  L   LC+   ++DA  LL EM   
Sbjct: 671 TLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL 730

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            + P+   Y  +    + +G+L+EA +    M+E
Sbjct: 731 DIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLE 764



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 219/433 (50%), Gaps = 1/433 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LP    +N ++  L       +   L  +M   G +P+  TYNIL+   C+   
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRK 401

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA+ + + M +    P + TY+ L+  +C  G ++EA +L  EM      P+VVTY T
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+          +A+ L+ E+ ++G+  N  T+N +I   C  G++ +  ++++  E  G
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P  +TYN++I+   KAG M  AF +   M  KG+  N +T  + +   C     D A 
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +LN    +G   D  +Y +LI G+ ++   + AL++   M +  ++P+   YN+ I G 
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                 E+A+ +  ++++ G+  D  T+ T+I GF  +G V  AL+ +++MV K   PD 
Sbjct: 642 KNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDH 701

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T   L  GLCR G ++ A K            + + YN LI+   +  +L++AF L  E
Sbjct: 702 ITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDE 761

Query: 421 MEEKKLGPDRYTY 433
           M E+K+ PD  TY
Sbjct: 762 MLERKIMPDDTTY 774



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 191/363 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTY+++L      G ++E   L ++M  +G  PN  TY  L+ G+       +A
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M QN    + +TYN LING C  G + E   + K  E+   +P  +TYN++IN 
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G    AF +  ++   GI PN VT+   I  YCK    D A K++ ++   G  PD
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPD 595

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YN+LI   C+ GNM  A +++ +M + GL  N    N+ +      K ++EA  L  
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYE 655

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G  LD  +Y TLI G+ +D     ALKL+ EM  +  +P   T+ A+  GL ++G
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNG 715

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             + A  +L+E+ +  + P+   +N +I+G+   G++++A + H++M+E+   PD  T +
Sbjct: 716 DIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775

Query: 365 ILL 367
           IL+
Sbjct: 776 ILV 778



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 199/396 (50%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  TYN ++  L ++ K+ E  +L   M + G+ P   TY+ L+  YC  G + EA++
Sbjct: 383 IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVK 442

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M      P+V TY  L+ G  N    ++A+ L  EM+   +  +  TYNTLIN   
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC 502

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             GR  E  +++   +  G  P A+T+N +I  + K G +  A  + + M   G  P+ V
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV 562

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY + ID  CK    + A +M++ +  KGL+ +    N+++   C E  +  A  +L   
Sbjct: 563 TYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLM 622

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            K G   +   Y + ITGY   +    AL+L+++M +  I   T TY  +I G S+ G  
Sbjct: 623 LKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNV 682

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A+ + +E++  G IPD  TF  + HG C  G ++ A +  ++M     +P+++  N+L
Sbjct: 683 TFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNML 742

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           ++G  R G L++A +     + +    D  TY+ L+
Sbjct: 743 INGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 234/522 (44%), Gaps = 18/522 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    +  + +L K    N    +L  M+  G VP   T+N +V    K G ++EA+ +
Sbjct: 210 PDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHI 269

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D +        V     L++G+C    + +A  + +E     L+P  VTY  LI    E
Sbjct: 270 KDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTE 329

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   +A++L  ++ +HG+ P+    N++IK    +     A  + + M ++G  PD  T
Sbjct: 330 EGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFT 388

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI   C+   + EA  + + M   G+K   +T +++L   C    +DEA  L     
Sbjct: 389 YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMP 448

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G+  + V+Y TL+ G+      ++A  L  EMK+  +  + +TYN +I GL   G+  
Sbjct: 449 GKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVC 508

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +  +ML      G +P   T+N+II+GF   G +  A   + +M  K   P+IVT    +
Sbjct: 509 EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+    + ALK       KG   D   YN+LI   C+E  +  A  +L  M +  L 
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLL 628

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+   Y +  T       +EEA +    M++ G                 ID  + +Y+ 
Sbjct: 629 PNISVYNSFITGYKNLKMMEEALRLYEKMIKEG-----------------IDLDTATYTT 671

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            I+     G    AL+++ E   KG   +  T+  L +GL +
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 201/416 (48%), Gaps = 18/416 (4%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D   ++ ++   F+ G   +A +L DE+    I+P+    ++ I   CK    ++A  ++
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R M++ GF P   T+N+++D   K G MEEA  + D +   G KM+ +   T++H  C +
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           +++ +A  +     + G    +V+Y  LI G   +    +A +L  +M++  ++PST  +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N +I GL      + A+ +  E+  SG IPD  T+N +IH  C   ++ +AL    KM E
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              KP IVT + LL   C  G +++A+K +     KG   + VTY TL+     +   + 
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A+ LL+EM++  +  + YTY  +   L   GR+ E  +        G +           
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFV----------- 523

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 P++++Y+  IN     G    A  ++++   KGI  N  TY + ++G  K
Sbjct: 524 ------PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/563 (23%), Positives = 250/563 (44%), Gaps = 51/563 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  +   +L    +     +   LL++M+ +G   +   +++++    K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+R+ D M  ++  PD    ++ I   C       A  + ++M+    +P   T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + GR  EA  + DEL   G K + V    ++  YC + ++ KA  I      +G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT-------------------- 220
             P  VTY  LI    + G  E+A+ +   M   GL  +T                    
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 221 --------------ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
                          T N ++H LC  +K+ EA  L    ++ G     V+Y +L+  Y 
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
            +   + A+KL+ EM  +   P+  TY  ++ G       ++A  +L E+ Q+G+  ++ 
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+NT+I+G C  G+V +  +   +   + F P  +T N +++G  + G++  A   ++  
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
             KG   + VTY + I   CK    + A  +L+++  K L PD   Y ++     + G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
             A +   +M++ G +      PN S            Y+  I  + +    ++AL+++E
Sbjct: 613 SHALQVLVLMLKDGLL------PNIS-----------VYNSFITGYKNLKMMEEALRLYE 655

Query: 507 ETRQKGIAINKSTYMNLMNGLIK 529
           +  ++GI ++ +TY  L++G  K
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSK 678



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 18/356 (5%)

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           +ME  G +PD  +   L+    ++ +  +A  ++  M  KG  ++    + ++     E 
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
             D+A  L +         D+      I    +   ANRAL +  +M++   +P  FT+N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           +++  L + G+ E+A+ + +ELL +G         T++HG+C + +V KAL    + +  
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P  VT  +L+ G   EG+ EKA +  R     G    +  +N +I  L  ++  +DA
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L  EM +  + PD +TY  +   L +  ++ EA      M ETG              
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETG-------------- 416

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              + P  ++Y   +  +C  G   +A++++ E   KG   N  TY  LM G I +
Sbjct: 417 ---VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINK 469



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 18/253 (7%)

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM+ +      + ++ ++    + G  + A+ + +E+  S + PD+   +  I   C   
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
              +AL    KM +  F P   T N ++  L + G +E+AL      +  GK +  V   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           TL+   C +R +  A  +  E     L P   TY  +     E G  E+A +    M + 
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G +                 PS+  ++  I    +   +KDA+ +F+E    GI  +  T
Sbjct: 347 GLL-----------------PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFT 388

Query: 520 YMNLMNGLIKRRK 532
           Y  L++ L +RRK
Sbjct: 389 YNILIHWLCQRRK 401


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 226/417 (54%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V ++ +L A+ K  K   V  L   ++  G+  +  +++ L+  +C+   L  A+ 
Sbjct: 70  LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALS 129

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M +    P + T+  L+NG+C+   ++EA  L  ++  L   P+VV YNT+I+   
Sbjct: 130 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           E+ +   A  +++ +++ GI+P+ +T+N +I      GK   + +I+ +M   G  PD +
Sbjct: 190 ENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVI 249

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T++ +ID   K G + EA +  D M ++ +  N +T N++++ LC    LDEA  +LN  
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G++ + V+Y TL+ GY + ++ + A+K+   M    +   TFTYN +  G  Q+G+ 
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQF 369

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A  +L  ++  G++PD  TFN ++ G C  G++EKAL     + +      I+T NI+
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNII 429

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + G+C+   +E A   F S  LKG + D +TY T++  L ++R   +A  L  +M++
Sbjct: 430 IKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 207/384 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G   D  +++T++D   +  +L+     L  M K G  P+  T+  LV+G+C +  
Sbjct: 99  IEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 158

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EAM +VD +      P+V  YN +I+  C    ++ A  +   ME + + PDV+TYN+
Sbjct: 159 IQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNS 218

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI R F SG+   + +++ ++   GI P+ +T + MI  + KEG++ +A K    M +  
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS 278

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYN+LI+  C  G ++EA ++++ M  KG   N +T NT+++  C  K++D+A 
Sbjct: 279 VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAM 338

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L   S  G   D  +Y TL  GY +  + N A K+   M    ++P  +T+N ++ GL
Sbjct: 339 KILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGL 398

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK E+A+  L +L +S  +    T+N II G C   +VE A      +  K   PD+
Sbjct: 399 CEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDV 458

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           +T   ++ GL R+ +  +A + +R
Sbjct: 459 ITYTTMMIGLRRKRLWLEAHELYR 482



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 213/418 (50%), Gaps = 20/418 (4%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L  ++ E    P+ V  + ++    K  K +    + R++E  G S D  +++TLI
Sbjct: 56  DALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLI 115

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  C+   +  A   +  M + G + + +T  ++++  C   ++ EA  L++     GY 
Sbjct: 116 DCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYE 175

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V Y T+I     + + + AL + + M++  I P   TYN++I  L  SGK   +  +
Sbjct: 176 PNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARI 235

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L+++++ G+ PD  TF+ +I  F  EGQ+ +A + +++M+++S  P+IVT N L++GLC 
Sbjct: 236 LSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCI 295

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L++A K     + KG   ++VTYNTL++  CK +R++DA  +L  M    +  D +T
Sbjct: 296 HGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFT 355

Query: 433 YAAIHTALVESGRLEEAQKFTSIMV-------------------ETGKINHQVVQPNTSK 473
           Y  ++    ++G+   A+K  + MV                   E GKI   +V+    +
Sbjct: 356 YNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQ 415

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
             E +    I+Y+  I   C   + +DA  +F     KG++ +  TY  +M GL ++R
Sbjct: 416 KSETV-VGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKR 472



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 197/405 (48%), Gaps = 35/405 (8%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +++ LP +  ++ L+         E    L + +E L +  D+ +++TLI+ F    R
Sbjct: 64  MAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSR 123

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A   + ++ + G +P+ VT   ++  +C   +I +A  +V  +   G+ P+ V YNT
Sbjct: 124 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNT 183

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +ID+ C+   ++ A  +++ M + G++ + IT N+++  L    K   +  +L+   + G
Sbjct: 184 IIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMG 243

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            + D +++  +I  + ++ +   A K +DEM +R + P+  TYN++I GL   G  ++A 
Sbjct: 244 IHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAK 303

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL------------------------- 345
            +LN ++  G  P+  T+NT+++G+C   +V+ A+                         
Sbjct: 304 KVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGY 363

Query: 346 ----QFH------NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
               QF+       +MV     PDI T N+LL GLC  G +EKAL            V  
Sbjct: 364 CQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGI 423

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +TYN +I  +CK  ++EDA+ L   +  K + PD  TY  +   L
Sbjct: 424 ITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 160/289 (55%), Gaps = 1/289 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD +TYN+++  LF  GK      +LSDM + G+ P+  T++ ++  + K G 
Sbjct: 204 MEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQ 263

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA +  D M Q    P++ TYN LING C  G+L+EA ++   M S    P+ VTYNT
Sbjct: 264 LLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNT 323

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N + +S R  +A K++  +   G+  +  T+N + + YC+ G+ + A K++  M   G
Sbjct: 324 LVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCG 383

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+N L+D  C+ G +E+A   ++ + +    +  IT N I+  +C   K+++A+
Sbjct: 384 VLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAW 443

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMP 288
            L  S + +G   D ++Y T++ G  R      A +L+ +MK+   +MP
Sbjct: 444 YLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 221/434 (50%), Gaps = 18/434 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PDN TY+T++  L K+ +++E   LL +M+ +G  PN   +N+L+S  CK G L  A 
Sbjct: 201 CAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAA 260

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++VD M     +P+  TYN L++G C  G LE+A  L  +M S K +P+ VT+ TLIN F
Sbjct: 261 KLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGF 320

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              GR+ +  +++  L+  G + N   ++ +I   CKEGK ++A ++ + M   G  P+ 
Sbjct: 321 VMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNT 380

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           + Y+ LID  C+ G ++EA   +  M  KG   N+ T ++++          +A ++   
Sbjct: 381 IVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKE 440

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            +      +EV Y  LI G  +D K   AL +W +M  R I      Y++MI G   +  
Sbjct: 441 MANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANL 500

Query: 306 TEQAIDMLNELLQSGMI--PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            EQ + + N++L  G +  PD  T+N +++ FC +  + +A+   N M+++   PD +TC
Sbjct: 501 VEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITC 560

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTY-NTLISSLCKERRLEDAFGLLSEME 422
           +I L  L RE +                  D   + + L+  L K +R   A  ++  M 
Sbjct: 561 DIFLKTL-RENM--------------NPPQDGREFLDELVVRLVKRQRTIGASKIIEVMM 605

Query: 423 EKKLGPDRYTYAAI 436
            K L P   T+A +
Sbjct: 606 HKFLLPKASTWAMV 619



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 228/434 (52%), Gaps = 5/434 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDM---KKQGLVPNRTTYNILVSGYCKLGW 60
           F C     ++N++L+ + ++G  N   +  + +   K   + PN  T+N+++   C+LG 
Sbjct: 126 FQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGL 185

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ V   +      PD +TY+ L++G C    ++EA  L  EM+     P++V +N 
Sbjct: 186 VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNV 245

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A KL+D +   G  PN VT+N ++   C +GK++KA  ++  M  N 
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+ TLI+     G   +  R++  +  +G + N    ++++  LC E K ++A 
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L      +G   + + Y  LI G  R+ K + A     EMK +  +P++FTY++++ G 
Sbjct: 366 ELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGY 425

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G + +AI +  E+  +  I +E  ++ +I+G C +G+  +AL    +M+ +  K D+
Sbjct: 426 FEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDV 485

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLL 418
           V  + ++ G C   ++E+ LK F   + +G  V  D +TYN L+++ C ++ +  A  +L
Sbjct: 486 VAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDIL 545

Query: 419 SEMEEKKLGPDRYT 432
           + M ++   PD  T
Sbjct: 546 NIMLDQGCDPDFIT 559



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 220/419 (52%), Gaps = 5/419 (1%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLR 103
           ++N +++   + G    A+   + +  +KSL   P+  T+N++I   C  G++++A  + 
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           +E+      PD  TY+TL++   +  R  EA  L+DE+   G  PN V  N++I   CK+
Sbjct: 194 REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKK 253

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           G + +A K+V NM   G  P+ VTYN L+   C  G +E+A  +++ M       N +T 
Sbjct: 254 GDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
            T+++    + +  +   +L S   RG+  +E  Y +LI+G  ++ K N+A++LW EM  
Sbjct: 314 GTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVG 373

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           +   P+T  Y+A+I GL + GK ++A   L+E+   G +P+  T+++++ G+   G   K
Sbjct: 374 KGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHK 433

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A+    +M   +   + V  +IL++GLC++G   +AL  ++  + +G  +D V Y+++I 
Sbjct: 434 AILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIH 493

Query: 404 SLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             C    +E    L ++M  +   + PD  TY  +  A      +  A    +IM++ G
Sbjct: 494 GFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQG 552



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 204/388 (52%), Gaps = 20/388 (5%)

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN---GFSPDCVTYNTLIDANCKAG 199
           E   K    + N ++    +EG  ++A +   ++  +      P+ +T+N +I A C+ G
Sbjct: 125 EFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLG 184

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            +++A  +   +  +    +  T +T++H LC E+++DEA  LL+     G + + V++ 
Sbjct: 185 LVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFN 244

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI+   +     RA KL D M  +  +P+  TYNA++ GL   GK E+A+ +LN+++ +
Sbjct: 245 VLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSN 304

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
             +P++ TF T+I+GF  +G+     +    +  +  + +    + L+SGLC+EG   +A
Sbjct: 305 KCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQA 364

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
           ++ ++  + KG   +++ Y+ LI  LC+E +L++A G LSEM+ K   P+ +TY+++   
Sbjct: 365 MELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRG 424

Query: 440 LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYK 499
             E+G   +A     I+V     N+  +             + + YS  IN  C  G++ 
Sbjct: 425 YFEAGDSHKA-----ILVWKEMANNNCIH------------NEVCYSILINGLCKDGKFM 467

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGL 527
           +AL ++++   +GI ++   Y ++++G 
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGF 495



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 245/507 (48%), Gaps = 19/507 (3%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
           ++++ +++++         + ++L  MK++  V     + ++   Y K    ++A+ +  
Sbjct: 61  DLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFH 120

Query: 70  LM-TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTLINRF 125
            M  + +    V ++N ++N     G+   A      +   +SL + P+ +T+N +I   
Sbjct: 121 RMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAM 180

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G   +A ++  E+      P+  T++ ++   CKE +ID+A  ++  M+  G  P+ 
Sbjct: 181 CRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNL 240

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V +N LI A CK G++  A +++D M  KG   N +T N ++H LC + KL++A  LLN 
Sbjct: 241 VAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQ 300

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                   ++V++GTLI G+    +A+   ++   ++ R    + + Y+++I GL + GK
Sbjct: 301 MVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK 360

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             QA+++  E++  G  P+   ++ +I G C EG++++A  F ++M  K + P+  T + 
Sbjct: 361 FNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSS 420

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G    G   KA+  ++         + V Y+ LI+ LCK+ +  +A  +  +M  + 
Sbjct: 421 LMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRG 480

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           +  D   Y+++      +  +E+  K  + M+  G     VVQP+            I+Y
Sbjct: 481 IKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGP----VVQPDV-----------ITY 525

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKG 512
           +  +N  C Q     A+ I      +G
Sbjct: 526 NILLNAFCIQKSIFRAIDILNIMLDQG 552



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 170/329 (51%), Gaps = 2/329 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V +N ++ AL KKG L     L+ +M  +G VPN  TYN LV G C  G 
Sbjct: 231 MQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGK 290

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A+ +++ M  NK +P+  T+  LING+   G   +  R+   +E+     +   Y++
Sbjct: 291 LEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSS 350

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+  +A +L  E+   G  PN + ++ +I   C+EGK+D+A   +  M+  G
Sbjct: 351 LISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKG 410

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           + P+  TY++L+    +AG+  +A  +   M       N +  + +++ LC + K  EA 
Sbjct: 411 YLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEAL 470

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM--KERQIMPSTFTYNAMIW 298
           M+      RG  LD V+Y ++I G+       + LKL+++M  +   + P   TYN ++ 
Sbjct: 471 MVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLN 530

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETT 327
                    +AID+LN +L  G  PD  T
Sbjct: 531 AFCIQKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 176/382 (46%), Gaps = 21/382 (5%)

Query: 155 IMIKWYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD-VMG 212
           +M K Y K    +KA  +   M  E        ++N++++   + G    A    + V+ 
Sbjct: 101 VMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVA 160

Query: 213 RKGLKM--NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            K L +  N +T N ++  +C    +D+A  +      R    D  +Y TL+ G  ++E+
Sbjct: 161 SKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEER 220

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A+ L DEM+     P+   +N +I  L + G   +A  +++ +   G +P+E T+N 
Sbjct: 221 IDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNA 280

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++HG C +G++EKA+   N+MV     P+ VT   L++G   +G      +   S   +G
Sbjct: 281 LVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG 340

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              +   Y++LIS LCKE +   A  L  EM  K  GP+   Y+A+   L   G+L+EA+
Sbjct: 341 HRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEAR 400

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
            F S M   G +                 P+S +YS  +  +   G    A+ +++E   
Sbjct: 401 GFLSEMKNKGYL-----------------PNSFTYSSLMRGYFEAGDSHKAILVWKEMAN 443

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
                N+  Y  L+NGL K  K
Sbjct: 444 NNCIHNEVCYSILINGLCKDGK 465



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 93/262 (35%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYN----------- 49
           M G GC P+ + Y+ ++D L ++GKL+E R  LS+MK +G +PN  TY+           
Sbjct: 371 MVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGD 430

Query: 50  ------------------------ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNM 85
                                   IL++G CK G   EA+ V   M       DV  Y+ 
Sbjct: 431 SHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSS 490

Query: 86  LINGWCNAGMLEEAFRLRKEM----------------------------ESLKLL----- 112
           +I+G+CNA ++E+  +L  +M                             ++ +L     
Sbjct: 491 MIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLD 550

Query: 113 ----PDVVT---------------------YNTLINRFFESGRSMEAFKLIDELDEHGIK 147
               PD +T                      + L+ R  +  R++ A K+I+ +    + 
Sbjct: 551 QGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLL 610

Query: 148 PNAVTHNIMIKWYCKEGKIDKA 169
           P A T  ++++  CK   + KA
Sbjct: 611 PKASTWAMVVQQVCKPKNVRKA 632


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 254/527 (48%), Gaps = 25/527 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG--WLK 62
           G  PD VTYN+ + A    G+  E  DLL  M  QG+ PN  TYN  + G C  G  W +
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAI-GACAKGRRW-E 234

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           EAM +++ + +    P   TYN +I+     G   EA  L  +M +  +  DV++Y+++I
Sbjct: 235 EAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVI 294

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                  R  EA  L++++   G+ PN +++N  I    K  +  +A  ++R M   G  
Sbjct: 295 AACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLV 354

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P  ++YN+   A    G   EA  ++  M  +G+  NTI+ N+ L       + ++A  L
Sbjct: 355 PTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKL 414

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L   S  G   D +S+ + I    R ++   A++L  EM    + P+  TYN+ I    +
Sbjct: 415 LRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGR 474

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG-QVEKALQFHNKMVEKSFKPDIV 361
           S + ++A+ +  E+   G+ P+  T+N++I   C++G Q E A+Q    M  +   PD++
Sbjct: 475 SARWQEAMGLFREMPTRGLSPNVVTYNSMIDA-CAKGEQWELAVQLLTGMPARGVAPDVI 533

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           + N  +    +    E AL+  +    +G   D ++YN+ +++  K  R  +A GLL +M
Sbjct: 534 SYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDM 593

Query: 422 EEKKLGPDRYTY-AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
               L P+  +Y AAIH      G+ E+      I+ E   +      PN          
Sbjct: 594 ATVGLTPNTVSYGAAIHAC----GKGEQWDVAVRILKE---MQTHGATPNL--------- 637

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I+YS  I+    QGR+K+A+ +  + R++G+  +  TY+ +++  
Sbjct: 638 --ITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 175/340 (51%), Gaps = 2/340 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P  ++YN+   A    G+  E  +LL +M  QG+ PN  +YN  +    K G 
Sbjct: 348 MTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQ 407

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A++++  M+   S PD+ ++N  I+        E A  L +EM +  L P+V+TYN+
Sbjct: 408 WEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNS 467

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I     S R  EA  L  E+   G+ PN VT+N MI    K  + + A +++  M   G
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARG 527

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD ++YN+ I+A  K    E A +++  M  +G K + I+ N+ +       +  EA 
Sbjct: 528 VAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREAL 587

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL   +  G   + VSYG  I    + E+ + A+++  EM+     P+  TY+A I   
Sbjct: 588 GLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDAC 647

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF--CSE 338
           ++ G+ ++A+D+L +L + G+ PD  T+ T+I  F  CS+
Sbjct: 648 AKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQRCSD 687



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 207/445 (46%), Gaps = 21/445 (4%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D  +YN+ I    N      A RL +EM +  + PDVVTYN+ I    + GR  EA  L+
Sbjct: 109 DTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLL 168

Query: 139 DEL--DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
            ++     GI P+ VT+N  I      G+  +A  ++  M   G  P+ +TYN+ I A  
Sbjct: 169 TQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACA 228

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           K    EEA  +++ +  +G   +T T N ++       +  EA  LL          D +
Sbjct: 229 KGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVI 288

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           SY ++I    R  +   A+ L ++M+ + + P+  +YN+ I   ++  + ++A+D+L E+
Sbjct: 289 SYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREM 348

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G++P   ++N+        G+  +AL+   +M  +   P+ ++ N  L    + G  
Sbjct: 349 TTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQW 408

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           EKA+K  R     G   D +++N+ I +  + ++ E A  LL EM    L P+  TY + 
Sbjct: 409 EKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSA 468

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
             A   S R +EA      M   G                 + P+ ++Y+  I + C++G
Sbjct: 469 IEACGRSARWQEAMGLFREMPTRG-----------------LSPNVVTYNSMI-DACAKG 510

Query: 497 -RYKDALQIFEETRQKGIAINKSTY 520
            +++ A+Q+      +G+A +  +Y
Sbjct: 511 EQWELAVQLLTGMPARGVAPDVISY 535



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 177/372 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ ++YN+ +DA  K  +  E  DLL +M   GLVP   +YN   +     G 
Sbjct: 313 MRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGR 372

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ ++  M      P+  +YN  ++     G  E+A +L + M ++   PD++++N+
Sbjct: 373 WVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNS 432

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I+      +   A +L+ E+   G+ PN +T+N  I+   +  +  +A  + R M   G
Sbjct: 433 AIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRG 492

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP+ VTYN++IDA  K    E A +++  M  +G+  + I+ N+ +      ++ + A 
Sbjct: 493 LSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELAL 552

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     RG   D +SY + +T   +  +   AL L  +M    + P+T +Y A I   
Sbjct: 553 QLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHAC 612

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + + A+ +L E+   G  P+  T++  I     +G+ ++A+     +  +   PD 
Sbjct: 613 GKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDA 672

Query: 361 VTCNILLSGLCR 372
            T   ++S   R
Sbjct: 673 QTYLTVISAFQR 684



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 157/353 (44%), Gaps = 25/353 (7%)

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G++E + R      R G   + + L +IL      +    A   L+     G  LD  SY
Sbjct: 55  GSLEPSTRSRGAASRGGKPKSLVKLKSILLE-AKGRDWRTALAALDEFKISGGSLDTTSY 113

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
              I       +   A++L  EM    + P   TYN+ I   S+ G+ ++A+D+L +++ 
Sbjct: 114 NIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVA 173

Query: 319 S--GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG-I 375
              G+ PD  T+N+ I    + G+ ++A+    +MV +   P+++T N  + G C +G  
Sbjct: 174 PTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAI-GACAKGRR 232

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
            E+A+      I +G    + TYN +I +  K  R  +A  LL +M    +  D  +Y++
Sbjct: 233 WEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSS 292

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS--------KTPEEID-------- 479
           +  A     R +EA      M   G ++  V+  N++        +  E +D        
Sbjct: 293 VIAACGRGRRWKEAMDLLEQMRTQG-VSPNVISYNSAIDACAKGDRWKEALDLLREMTTV 351

Query: 480 ---PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              P+ ISY+         GR+ +AL++ +E   +GIA N  +Y + ++   K
Sbjct: 352 GLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAK 404



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 17/169 (10%)

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +ILL    R+     AL     + + G ++D+ +YN  I++    R+   A  LL EM  
Sbjct: 81  SILLEAKGRD--WRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPT 138

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + + PD  TY +   A  + GR +EA    +          Q+V P      E I P  +
Sbjct: 139 EGVTPDVVTYNSAIAACSKGGRWKEAMDLLT----------QMVAPT-----EGITPDVV 183

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +Y+  I    + GR+K+A+ + E+   +G+  N  TY + +    K R+
Sbjct: 184 TYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRR 232


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 230/460 (50%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLVP-NRTTYNILVSGYCKL 58
           M   GC PD  +Y  +L  L       +  DLL  M   +G  P +   Y  +++G  + 
Sbjct: 162 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 221

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L +A  + D M      PDV TY+ +I+       +++A ++   M    ++PD + Y
Sbjct: 222 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 281

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            +L++ +  SG+  EA  +  ++  HG++P+ VT+  ++ + CK GK  +A KI  ++ +
Sbjct: 282 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 341

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  PD  TY TL+      G + E   ++D+M +KG+++     N I+       K+DE
Sbjct: 342 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 401

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A ++ ++  ++G   D V+YGT++       + + AL  ++ +K   + P+   +  +I 
Sbjct: 402 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 461

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL    K ++  ++  E++  G+  D   FN I+   C +G+V +A    + MV    +P
Sbjct: 462 GLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEP 521

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +  T N L+ G C +G +++A+K     +  G     VTYNT+I+   +  R+ED   LL
Sbjct: 522 NTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLL 581

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            EM+ K + P   TY  +   L ++GR   A++    M++
Sbjct: 582 REMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 253/537 (47%), Gaps = 31/537 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG----YCKLGWLKE 63
           P+  TY  ++    + G+L+     +  +   GL   R   N L S      C  G    
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGL---RHEPNPLQSSSQGPLCTAGG--R 151

Query: 64  AMR---VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLP-DVVTY 118
           AMR   V+  M +    PD+++Y +L+ G C+    ++A  L   M   K   P DVV Y
Sbjct: 152 AMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAY 211

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            T+IN     G+  +A+ L D + + G  P+ VT++ +I    K   +DKA ++   M +
Sbjct: 212 TTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVK 271

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           NG  PDC+ Y +L+   C +G  +EA  +   M R G++ + +T   ++  LC   K  E
Sbjct: 272 NGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTE 331

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  + +S  KRG+  D  +YGTL+ GY  +        L D M ++ +      +N ++ 
Sbjct: 332 ARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMG 391

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
             ++  K ++A+ + + + Q G+ PD   + T++   C+ G+V+ AL   N +  +   P
Sbjct: 392 AYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAP 451

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +IV    L+ GLC     +K  +     I +G  +D++ +N ++ +LCK+ R+ +A  L 
Sbjct: 452 NIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLF 511

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             M    + P+  TY  +       G+++EA K   +MV  G                 +
Sbjct: 512 DLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG-----------------V 554

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
            PS ++Y+  IN +   GR +D L +  E   KG+     TY  L+ GL +  ++++
Sbjct: 555 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVA 611


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 189/338 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   +N ++  L K+ K+NE + L  ++ K+GL P   ++N L++GYCK G L + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M +N+  PDV+TY++LING C  G L++A +L  EM    L+P+ VT+ TLIN 
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +GR+    ++  ++   G+KP+ +T+N +I   CK G + +A K+V  M + G  PD
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  LID  CK G++E A  +   M ++G++++ +    ++   C E ++ EA   L 
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D+ +Y  +I G+ +        KL  EM+    +P   TYN ++ GL + G
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           + + A  +L+ +L  G++PD+ T+N ++ G C  G  E
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE 557



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 196/374 (52%), Gaps = 6/374 (1%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G  P+   +N+L+   CK   + EA  +   + +    P V ++N LING+C +G L++ 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           FRL++ M   ++ PDV TY+ LIN   + G+  +A KL  E+ + G+ PN VT   +I  
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           +C  G+ D   +I + M   G  PD +TYNTLI+  CK G++ EA +++  M ++GLK +
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
             T   ++   C E  L+ A  +     K G  LD V++  LI+G+ R+ +   A +   
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM E  I P   TY  +I G  + G  +    +L E+   G +P   T+N +++G C +G
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           Q++ A    + M+     PD +T NILL G C+ G  E    F +    KG   D  +Y 
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE---DFDKLQSEKGLVQDYGSYT 576

Query: 400 TLISSL---CKERR 410
           +LI  L   CKER+
Sbjct: 577 SLIGDLRKTCKERQ 590



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 214/433 (49%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           +KGK +      S ++ +G   +   +++L++ Y   G+  +A++   L+ ++       
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           +   L +      +   A+   +E+      PDV  +N L++R  +  +  EA  L  E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            + G++P  V+ N +I  YCK G +D+  ++ R M EN   PD  TY+ LI+  CK G +
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           ++A ++   M  +GL  N +T  T+++  C   + D    +     ++G   D ++Y TL
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G  +      A KL  EM +R + P  FTY  +I G  + G  E A+++  E+++ G+
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
             D   F  +I GFC EGQV +A +   +M+E   KPD  T  +++ G C++G ++   K
Sbjct: 432 ELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFK 491

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             +     G     VTYN L++ LCK+ ++++A  LL  M    + PD  TY  +     
Sbjct: 492 LLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551

Query: 442 ESGRLEEAQKFTS 454
           + G  E+  K  S
Sbjct: 552 KHGNREDFDKLQS 564



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 219/436 (50%), Gaps = 3/436 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G    N+ ++ +++A    G  ++       ++K  L     +   L     KL  
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A    + +      PDV  +N+L++  C    + EA  L  E+    L P VV++NT
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + +SG   + F+L   + E+ + P+  T++++I   CKEG++D A K+   M + G
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+ TLI+ +C  G  +    +   M RKG+K + IT NT+++ LC    L EA 
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAK 385

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   ++RG   D+ +Y  LI G  ++     AL++  EM +  I      + A+I G 
Sbjct: 386 KLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGF 445

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+  +A   L E+L++G+ PD+ T+  +IHGFC +G V+   +   +M      P +
Sbjct: 446 CREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGV 505

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+LL+GLC++G ++ A     + +  G   D +TYN L+   CK    ED   L S 
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQS- 564

Query: 421 MEEKKLGPDRYTYAAI 436
             EK L  D  +Y ++
Sbjct: 565 --EKGLVQDYGSYTSL 578



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 223/455 (49%), Gaps = 20/455 (4%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            +++L+N + ++G   +A +  + +    L     +   L +R  +   +  A+   +E+
Sbjct: 157 VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEI 216

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            + G  P+    N+++   CKE KI++A  +   + + G  P  V++NTLI+  CK+GN+
Sbjct: 217 LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNL 276

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           ++ FR+   M    +  +  T + +++ LC E +LD+A  L      RG   ++V++ TL
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G+    +A+  ++++ +M  + + P   TYN +I GL + G   +A  ++ E+ Q G+
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD+ T+  +I G C EG +E AL+   +MV++  + D V    L+SG CREG + +A +
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             R  +  G   D  TY  +I   CK+  ++  F LL EM+     P   TY  +   L 
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
           + G+++ A      M+  G +                 P  I+Y+  +  HC  G  +D 
Sbjct: 517 KQGQMKNANMLLDAMLNLGVV-----------------PDDITYNILLEGHCKHGNREDF 559

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISK 536
            ++  E   KG+  +  +Y +L+  L K  K   K
Sbjct: 560 DKLQSE---KGLVQDYGSYTSLIGDLRKTCKERQK 591



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 236/536 (44%), Gaps = 44/536 (8%)

Query: 3   GFGCL------PDNVTYNTILDALFKKGKLNEVRDLLSDMKK--QGLVPNRTTYNILVSG 54
           GF C       P +  ++ IL  + +  K++  + L S +K+    L PN     I ++ 
Sbjct: 19  GFLCFSTWMTPPTSHCHDPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNP 78

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
           +        ++    L++  K L     + + I+ +C         ++  E +SL  L  
Sbjct: 79  H--------SLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSL--LQF 128

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VV+           G++  +      L+  G   + +  ++++  Y   G    A +  R
Sbjct: 129 VVS---------RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR 179

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            + ++       +   L D   K      A+   + +   G   +    N ++H LC E 
Sbjct: 180 LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEH 239

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K++EA +L     KRG     VS+ TLI GY +    ++  +L   M E ++ P  FTY+
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL + G+ + A  +  E+   G++P++ TF T+I+G C  G+ +  ++ + +M+ K
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KPD++T N L++GLC+ G L +A K       +G   D  TY  LI   CKE  LE A
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             +  EM ++ +  D   + A+ +     G++ EA++    M+E G              
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG-------------- 465

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              I P   +Y+  I+  C +G  K   ++ +E +  G      TY  L+NGL K+
Sbjct: 466 ---IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 233/472 (49%), Gaps = 21/472 (4%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L  L K G+   +  +  +M   GL P+  T+  L+ G C+ G L  A  + D M  
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
              +P V  Y +LI G C+   +EEA  + + M  + + P+V TYNTL++ + +   + +
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A +L  ++   G+ P+ VT  I+I   CK G++  A  +  NM +   +P+   YN+LID
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           A CK G++ EA  +   + R  +  +  T + ++  LC   + +EA  +    +K G   
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILA 390

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + V+Y +LI G  ++ K ++AL++  +M E  + P+  T++ +I G  +    + A+ + 
Sbjct: 391 NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY 450

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           +E++   + PD  T+  +I G C  G +++AL+ ++ M++    P+  T + LL GLC++
Sbjct: 451 SEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKD 510

Query: 374 GILEKALKFFRSWI-------------LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           G +  AL+ F   I              K    + V Y  LI  LC++ +   A  L S+
Sbjct: 511 GKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSD 570

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           M    L PD   Y  +   L +        K+  +M+    +   V+ PN++
Sbjct: 571 MRRYGLQPDEVIYVVMLRGLFQV-------KYILMMLHADMLKFGVI-PNSA 614



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 232/459 (50%), Gaps = 15/459 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  +T+ T++D   ++G L   +++  +M+ +G+VP    Y IL+ G C    ++EA
Sbjct: 177 GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEA 236

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +    P+V+TYN L++G+C     ++A RL ++M    L+PDVVT+  LI+ 
Sbjct: 237 ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDG 296

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A  L   + +  + PN   +N +I  YCK G + +A  +   +E    SPD
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+ LI   C     EEA  + + M ++G+  N++T N+++   C E K+D+A  + +
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   + +++ TLI GY +      A+ ++ EM  + + P   TY AMI G  + G
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE----------K 354
             ++A+ + +++L +G+ P+  T + ++ G C +G++  AL+   + +E           
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAG 536

Query: 355 SFKPDI---VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
             KP +   V    L+ GLC++G   KA+K F      G   D V Y  ++  L + + +
Sbjct: 537 GSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI 596

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
                L ++M +  + P+   +  +     ESG L+ AQ
Sbjct: 597 --LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQ 633



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 183/383 (47%), Gaps = 48/383 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  TYNT++D   K     +   L  DM  +GLVP+  T+ IL+ G CK G 
Sbjct: 243 MREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K A  +   M +    P++  YN LI+ +C  G + EA  L  E+E  ++ PDV TY+ 
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       R+ EA  + +++ + GI  N+VT+N +I   CKEGK+DKA +I   M ENG
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +T++TLID  CK  N++ A  +   M  K L                        
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSP---------------------- 460

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                        D V+Y  +I G+ +      ALKL+ +M +  I P+ +T + ++ GL
Sbjct: 461 -------------DVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGL 507

Query: 301 SQSGKTEQAIDMLNELLQ----------SGMIPDET---TFNTIIHGFCSEGQVEKALQF 347
            + GK   A+++  E ++           G  P  T    +  +IHG C +GQ  KA++ 
Sbjct: 508 CKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKL 567

Query: 348 HNKMVEKSFKPDIVTCNILLSGL 370
            + M     +PD V   ++L GL
Sbjct: 568 FSDMRRYGLQPDEVIYVVMLRGL 590



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 241/541 (44%), Gaps = 71/541 (13%)

Query: 1   MEGFGCLPD-NVT-YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL 58
           +E F   P+ N+  Y+ I+  L     L+  R LL+D+  Q LV +   Y+     + +L
Sbjct: 47  LEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLV-QNLVKSHKPYHACQLAFSEL 105

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             LK +          K  P+V  Y  LI   C   ++EEA  +  ++            
Sbjct: 106 SRLKSS----------KFTPNV--YGELIIVLCKMELVEEALSMYHKV------------ 141

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
                                     G        N+++    K G+ +   +I   M  
Sbjct: 142 --------------------------GAALTIQACNVLLYVLVKTGRFELLWRIYEEMIS 175

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           NG SP  +T+ TLID  C+ G++  A  M D M  KG+    I    ++  LC + K++E
Sbjct: 176 NGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEE 235

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +  +  + G Y +  +Y TL+ GY +   A +AL+L+ +M    ++P   T+  +I 
Sbjct: 236 AESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILID 295

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL + G+ + A ++   +++  + P+   +N++I  +C  G V +A+    ++      P
Sbjct: 296 GLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSP 355

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+ T +IL+ GLC     E+A   F     +G   +SVTYN+LI   CKE +++ A  + 
Sbjct: 356 DVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEIC 415

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           S+M E  + P+  T++ +     +   L+ A    S MV                  + +
Sbjct: 416 SQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMV-----------------IKSL 458

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            P  ++Y+  I+ HC  G  K+AL+++ +    GI  N  T   L++GL K  K IS A+
Sbjct: 459 SPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK-ISDAL 517

Query: 539 D 539
           +
Sbjct: 518 E 518



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 15/185 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++D   K G + E   L SDM   G+ PN  T + L+ G CK G + +A+ +
Sbjct: 460 PDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALEL 519

Query: 68  -------------VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
                        VD      SL +   Y  LI+G C  G   +A +L  +M    L PD
Sbjct: 520 FTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPD 579

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
            V Y  ++   F+    +    L  ++ + G+ PN+  H I+ + Y + G +  A    +
Sbjct: 580 EVIYVVMLRGLFQVKYIL--MMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSK 637

Query: 175 NMEEN 179
           ++EEN
Sbjct: 638 DLEEN 642


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 198/392 (50%), Gaps = 56/392 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG-------- 59
           P+  T+N +++AL K GK+N+ RD++ DMK  G  PN  +YN L+ GYCKLG        
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 60  --------------------------W----LKEAMRVVDLMTQNKSLPDVWTYNMLING 89
                                     W    L  +++V   M     +P+V TYN LING
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING 340

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            CN G + EA  +R +M S  + P+++TY++LIN F ++G   EA  + D +   G +P 
Sbjct: 341 LCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPT 400

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
              +N++I  YCK GKID    +   ME  G  PD  TYN LI   C+ GN+E A ++ D
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            +  KGL  + +T + ++   C   +  +A MLL   SK G     ++Y  ++ GY ++ 
Sbjct: 461 QLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEG 519

Query: 270 KANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
               A  +  +M KER++  +  +YN ++ G SQ GK E A  +LNE+L+ G++P+  T+
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +                  +MV+K F PDI
Sbjct: 580 EIV----------------KEEMVDKGFVPDI 595



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 211/385 (54%), Gaps = 7/385 (1%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE--- 127
           M + K  P+V+T+N++IN  C  G + +A  + ++M+     P+VV+YNTLI+ + +   
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGG 273

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  +A  ++ E+ E+ + PN  T NI+I  + K+  +  + K+ + M +    P+ +T
Sbjct: 274 NGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI+  C  G + EA  M D M   G++ N IT +++++  C    + EA  + +S  
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G       Y  LI  Y +  K +    L +EM+   I+P   TYN +I GL ++G  E
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  + ++L   G+ PD  TF+ ++ G+CS G+  KA     +M +   KP  +T NI++
Sbjct: 454 AAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512

Query: 368 SGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            G C+EG L KA    R+ + K + +  +  +YN L+    ++ +LEDA  LL+EM EK 
Sbjct: 513 KGYCKEGNL-KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQ 450
           L P+R TY  +   +V+ G + + +
Sbjct: 572 LVPNRITYEIVKEEMVDKGFVPDIE 596



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 201/375 (53%), Gaps = 9/375 (2%)

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           L KEM   K+ P+V T+N +IN   ++G+  +A  +++++  +G  PN V++N +I  YC
Sbjct: 210 LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC 269

Query: 162 K---EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
           K    GK+ KA  +++ M EN  SP+  T+N LID   K  N+  + ++   M  + +  
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N IT N++++ LC   K++EA  + +     G   + ++Y +LI G+ ++     AL ++
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
           D +K +   P+T  YN +I    + GK +    +  E+ + G++PD  T+N +I G C  
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G +E A +  +++  K   PD+VT +IL+ G C  G   KA    +     G     +TY
Sbjct: 450 GNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 399 NTLISSLCKERRLEDAFGLLSEME-EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           N ++   CKE  L+ A  + ++ME E++L  +  +Y  +     + G+LE+A    + M+
Sbjct: 509 NIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 458 ETG----KINHQVVQ 468
           E G    +I +++V+
Sbjct: 569 EKGLVPNRITYEIVK 583



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 198/440 (45%), Gaps = 20/440 (4%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           +ML+  + N    E  F   K           ++   L+    +  RS +   L  E+  
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIR 216

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN--- 200
             I+PN  T N++I   CK GK++KA  ++ +M+  G+SP+ V+YNTLID  CK G    
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGK 276

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           M +A  ++  M    +  N  T N ++     +  L  +  +      +    + ++Y +
Sbjct: 277 MYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNS 336

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI G     K N A+ + D+M    + P+  TY+++I G  ++G  ++A+DM + +   G
Sbjct: 337 LINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
             P    +N +I  +C  G+++       +M  +   PD+ T N L++GLCR G +E A 
Sbjct: 397 TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           K F     KG   D VT++ L+   C       A  LL EM +  L P   TY  +    
Sbjct: 457 KLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G L+ A    + M +  ++   V                 SY+  +  +  +G+ +D
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVA----------------SYNVLLQGYSQKGKLED 559

Query: 501 ALQIFEETRQKGIAINKSTY 520
           A  +  E  +KG+  N+ TY
Sbjct: 560 ANMLLNEMLEKGLVPNRITY 579



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 205/438 (46%), Gaps = 25/438 (5%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE-HGIKPNAVTHN 154
           LE  F+L   + + K    + ++   ++ F  +G   +   +   +     +  N++  +
Sbjct: 101 LELTFKLLHSLANAKRYSKIRSF---LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIAD 157

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           +++  Y    + +   +  +     G+    ++   L+ A  K     +   +   M R+
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRR 217

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR---DEKA 271
            ++ N  T N +++ LC   K+++A  ++      GY  + VSY TLI GY +   + K 
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKM 277

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +A  +  EM E ++ P+  T+N +I G  +      ++ +  E+L   +IP+  T+N++
Sbjct: 278 YKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSL 337

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G C+ G++ +A+   +KMV    +P+++T + L++G C+ G++++AL  F S   +G 
Sbjct: 338 INGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGT 397

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
              +  YN LI + CK  +++D F L  EME + + PD  TY  +   L  +G +E A+K
Sbjct: 398 RPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               +   G                   P  +++   +  +CS+G  + A  + +E  + 
Sbjct: 458 LFDQLTNKGL------------------PDLVTFHILMEGYCSRGESRKAAMLLKEMSKM 499

Query: 512 GIAINKSTYMNLMNGLIK 529
           G+     TY  +M G  K
Sbjct: 500 GLKPRHLTYNIMMKGYCK 517


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 265/526 (50%), Gaps = 44/526 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD  T N  +  L            L+ +  +G  P+R+++N +VS  CKLG +K A  
Sbjct: 18  LPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAED 77

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL------PDVVTYNT 120
           +V  M +    PDV +YN LI+G C  G +  A  +   +ESL+        PD+V++N+
Sbjct: 78  IVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV---LESLRASHGFICKPDIVSFNS 134

Query: 121 LINRFFESGRSMEAFKLIDELDEH-GI-----KPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           L N F          K++DE+  + G+      PN VT++  I  +CK G++  A K   
Sbjct: 135 LFNGF-------SKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           +M+ +  SP+ VT+  LID  CKAG++E A  +   M R  + +N +T   ++   C + 
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           ++  A  + +   +     + + Y T+I G+F+   ++ A+K   +M  + +      Y 
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL  +GK ++A +++ ++ +S ++PD   F T+++ +   G+++ A+  ++K++E+
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
            F+PD+V  + ++ G+ + G L +A+ +F   I K    + V Y  LI +LCKE    + 
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA---NDVMYTVLIDALCKEGDFIEV 422

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L S++ E  L PD++ Y +    L + G L +A K  + MV+ G +            
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL------------ 470

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                   ++Y+  I    S+G   +A Q+F+E    GI+ + + +
Sbjct: 471 -----LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 222/492 (45%), Gaps = 36/492 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   ++N+++  + K G++    D++  M + G  P+  +YN L+ G+C+ G ++ A
Sbjct: 51  GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110

Query: 65  MRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNT 120
             V++ +  +      PD+ ++N L NG+    ML+E F     M  LK   P+VVTY+T
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM--LKCCSPNVVTYST 168

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I+ F +SG    A K    +    + PN VT   +I  YCK G ++ A  + + M    
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S + VTY  LID  CK G M+ A  M   M    ++ N++   TI+         D A 
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     +G  LD  +YG +I+G   + K   A ++ ++M++  ++P    +  M+   
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL--------------- 345
            +SG+ + A++M ++L++ G  PD    +T+I G    GQ+ +A+               
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV 408

Query: 346 ---------------QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
                          +  +K+ E    PD       ++GLC++G L  A K     + +G
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
             +D + Y TLI  L  +  + +A  +  EM    + PD   +  +  A  + G +  A 
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528

Query: 451 KFTSIMVETGKI 462
                M   G +
Sbjct: 529 DLLLDMQRRGLV 540



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 226/459 (49%), Gaps = 34/459 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLV--PNRTTYNILVSGYCK 57
           M  FGC PD ++YN+++D   + G +     +L  ++   G +  P+  ++N L +G+ K
Sbjct: 82  MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           +  L E    + +M +  S P+V TY+  I+ +C +G L+ A +    M+   L P+VVT
Sbjct: 142 MKMLDEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVT 200

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +  LI+ + ++G    A  L  E+    +  N VT+  +I  +CK+G++ +A ++   M 
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E+   P+ + Y T+ID   + G+ + A + +  M  +G++++      I+  LC   KL 
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA  ++    K     D V + T++  YF+  +   A+ ++ ++ ER   P     + MI
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380

Query: 298 WGLSQSGKTEQAI------------------------------DMLNELLQSGMIPDETT 327
            G++++G+  +AI                               + +++ ++G++PD+  
Sbjct: 381 DGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFM 440

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           + + I G C +G +  A +   +MV++    D++    L+ GL  +G++ +A + F   +
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
             G + DS  ++ LI +  KE  +  A  LL +M+ + L
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 218/458 (47%), Gaps = 29/458 (6%)

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
           M+ EA +    +     LPD  T N  I++   S   + + K +  L   G  P+  + N
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM-GR 213
            ++ + CK G++  A  IV +M   G  PD ++YN+LID +C+ G++  A  +++ +   
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 214 KGL--KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            G   K + ++ N++ +     K LDE ++ +    K     + V+Y T I  + +  + 
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGEL 179

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             ALK +  MK   + P+  T+  +I G  ++G  E A+ +  E+ +  M  +  T+  +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I GFC +G++++A + +++MVE   +P+ +    ++ G  + G  + A+KF    + +G 
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            +D   Y  +IS LC   +L++A  ++ +ME+  L PD   +  +  A  +SGR++ A  
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEID-------------------PSSISYSEKINEH 492
               ++E G       +P+       ID                    + + Y+  I+  
Sbjct: 360 MYHKLIERG------FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDAL 413

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           C +G + +  ++F +  + G+  +K  Y + + GL K+
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 13/195 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V  +T++D + K G+L+E        K      N   Y +L+   CK G   E  R+
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEK-----ANDVMYTVLIDALCKEGDFIEVERL 425

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +++   +PD + Y   I G C  G L +AF+L+  M    LL D++ Y TLI     
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS 485

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G  +EA ++ DE+   GI P++   +++I+ Y KEG +  A  ++ +M+  G       
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL------ 539

Query: 188 YNTLIDANC--KAGN 200
              + DA+C  + GN
Sbjct: 540 VTAVSDADCSKQCGN 554


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 226/446 (50%), Gaps = 39/446 (8%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD V+YNTI+D LFK+G +++      +M  + + P+  TYN +++   K   +  AM
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V+ +M     +P+ +TYN +++G+C++G  E+A  + ++M S  + PDVVTYN+L++  
Sbjct: 67  EVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTH-------------------------------- 153
            ++G+  EA K+ D + + G+KP+  T+                                
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 154 ---NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
              NI+I  Y K+ K+D+   +   M + G +P+ V Y T+ID  CK G +++A    + 
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M  KGL  N +   +++H LC   K ++A  L+     +G   + V + T++    ++ +
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              + KL+D +    + P   TY+ +I G   +GK + A+ +L  ++  G+ PD  T++T
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I+G+C   ++E AL    +M      PDI+T NI+L GL R      A + +      G
Sbjct: 363 LINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFG 416
             ++  TYN ++    K   L   FG
Sbjct: 423 TQLELSTYNIILMDFAKTNSLMMHFG 448



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 222/418 (53%), Gaps = 4/418 (0%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+  +YN ++ G  K G + +A      M   +  PD  TYN +I     A  ++ A   
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM-- 66

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             E+ ++ ++P+  TYN++++ +  SG+S +A  +  ++   GI+P+ VT+N ++ + CK
Sbjct: 67  --EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            GK  +A KI  +M + G  PD  TY TL+      G + E   ++ +M + G++++   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            N ++     ++K+DE  ++ +   ++G   + V+Y T+I G  +  + + A+  +++M 
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           ++ + P+   Y ++I  L    K E+A +++ E+L  G+ P+   FNTI+   C EG+V 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           ++ +  + +      PD++T + L+ G C  G ++ A+K     +  G   DSVTY+TLI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +  CK  R+EDA  L  EME   + PD  TY  I   L  + R   A++  + + E+G
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 177/331 (53%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYN+++D L K GK  E R +   M K+GL P+ TTY  L+ GY   G L E 
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ LM QN    D   +N+LI  +     ++E   +  +M    L P+ V Y T+I+ 
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDG 226

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + GR  +A    +++ + G+ PN V +  +I   C   K +KA +++  + + G +P+
Sbjct: 227 LCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPN 286

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V +NT++D+ CK G + E+ ++ D++G  G+  + IT +T++   C   K+D A  LL 
Sbjct: 287 IVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLT 346

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D V+Y TLI GY +  +   AL L+ EM+   + P   TYN ++ GL ++ 
Sbjct: 347 GMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTR 406

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +T  A ++   + +SG   + +T+N I+  F
Sbjct: 407 RTAAAKELYARITESGTQLELSTYNIILMDF 437



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 202/411 (49%), Gaps = 24/411 (5%)

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
           D+    P+ V++N +I    KEG +DKA      M +   SPD VTYN++I A  KA  M
Sbjct: 3   DDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAM 62

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A  ++ VM    +  N  T N+I+H  C   + ++A  +       G   D V+Y +L
Sbjct: 63  DRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           +    ++ K   A K++D M +R + P   TY  ++ G +  G   +  D+L  ++Q+GM
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
             D   FN +I  +  + +V++ +   +KM ++   P+ V    ++ GLC+ G L+ A+ 
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            F   I KG   + V Y +LI +LC   + E A  L+ E+ ++ + P+   +  I  +L 
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPN-------------------TSKTPEEIDPSS 482
           + GR+ E++K   ++   G +N  V+  +                   T      + P S
Sbjct: 299 KEGRVIESKKLFDLLGHIG-VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDS 357

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           ++YS  IN +C   R +DAL +F+E    G+  +  TY  +++GL + R++
Sbjct: 358 VTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRT 408



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 92/158 (58%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V +NTILD+L K+G++ E + L   +   G+ P+  TY+ L+ GYC  G +  A
Sbjct: 282 GINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGA 341

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M+++  M      PD  TY+ LING+C    +E+A  L KEMES  + PD++TYN +++ 
Sbjct: 342 MKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHG 401

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
            F + R+  A +L   + E G +    T+NI++  + K
Sbjct: 402 LFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAK 439



 Score = 45.1 bits (105), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 51/100 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD+VTY+T+++   K  ++ +   L  +M+  G+ P+  TYNI++ G  +   
Sbjct: 348 MVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRR 407

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF 100
              A  +   +T++ +  ++ TYN+++  +     L   F
Sbjct: 408 TAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHF 447


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 241/512 (47%), Gaps = 17/512 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P    YN ++DAL K   L+        M      P+R TYNIL+ G C+ G + EA
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+V  M      P+V+TY +LI+G+ NA  ++EAFR+ + M++ K+ P   T  + I+ 
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F      +AF+L  E  E       +  + ++     +    +A  +++   + G  PD
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPD 391

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N  ++   K  ++ E   ++D    +G+K    T   ++  L    K+ E     N
Sbjct: 392 SATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFN 451

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              K G   +  SY  +I  + +    ++A   + EM+ + I P+  T+N +I G  + G
Sbjct: 452 QMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGG 511

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  ++ D+L  LL+ G  PD  TF++II G C   Q+E AL   ++MV     P+ VT N
Sbjct: 512 EICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYN 571

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           IL+  LC  G + +++K  R     G   D  ++N LI S C+  ++EDA  L S M   
Sbjct: 572 ILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSL 631

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L PD YTY A      +SGR  EA++    M   G +                 P S +
Sbjct: 632 GLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCM-----------------PDSFT 674

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
            +  ++    Q +++ A +I +   + GI +N
Sbjct: 675 CNIILDALVKQDQFEAAQKIAKTCSEWGILVN 706



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 208/460 (45%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C PD  TYN ++  + + G ++E   L+  M+  G  PN  TY IL+ G+     
Sbjct: 243 MSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKK 302

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA RV++ M   K  P   T    I+G        +AF L  E    + +   +  +T
Sbjct: 303 VDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDT 362

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+        + EA  L+ +  + G KP++ T NI +    K   +++ C I+    E G
Sbjct: 363 LLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQG 422

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                 TY  LI A   AG + E     + M + GL  N  + N ++   C    +D+A 
Sbjct: 423 MKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKAT 482

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                   +G   + V++ TLI GY +  +  ++  L   + E    P  FT++++I GL
Sbjct: 483 NTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGL 542

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + E A+   +E++  G+ P+  T+N +IH  C  G V ++++   KM      PD+
Sbjct: 543 CRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDV 602

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N L+   CR G +E A K F S +  G   D+ TY   I   C+  R  +A  L   
Sbjct: 603 FSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLS 662

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ME     PD +T   I  ALV+  + E AQK      E G
Sbjct: 663 MEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWG 702



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 235/491 (47%), Gaps = 17/491 (3%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G+ P+   YN ++    K   L  A      M+ +   PD +TYN+LI+G C +G+++EA
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
            RL K+ME L   P+V TY  LI+ FF + +  EAF++++ +    + P+  T    I  
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
             +    +KA ++     E       +  +TL+          EA  ++   G+ G K +
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPD 391

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           + T N  ++ L     L+E   +L+   ++G      +Y  LI   +   K       ++
Sbjct: 392 SATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFN 451

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           +M +  ++ +  +YN +I    ++   ++A +   E+   G+ P+  TFNT+I G+C  G
Sbjct: 452 QMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGG 511

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           ++ K+      ++E  FKPDI T + ++ GLCR   +E AL  F   ++ G + ++VTYN
Sbjct: 512 EICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYN 571

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI SLC    +  +  LL +M+   + PD +++ A+  +    G++E+A+K  S M+  
Sbjct: 572 ILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSL 631

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G I                 P + +Y   I   C  GR+ +A ++F      G   +  T
Sbjct: 632 GLI-----------------PDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFT 674

Query: 520 YMNLMNGLIKR 530
              +++ L+K+
Sbjct: 675 CNIILDALVKQ 685



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 204/475 (42%), Gaps = 52/475 (10%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           +LI  W   G+ +    +  ++  L + P    YN +I+   +S     A+    ++   
Sbjct: 187 ILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSAD 246

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
             KP+  T+NI+I   C+ G +D+A ++V+ ME  G+SP+  TY  LID    A  ++EA
Sbjct: 247 NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEA 306

Query: 205 FRMMDVMGRKGLKMNTITLNTILH--------------------------------TLCC 232
           FR+++ M  + +  +  T+ + +H                                 LCC
Sbjct: 307 FRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCC 366

Query: 233 ---EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
              +    EA  LL    K G+  D  ++   +    +    N    + D   E+ +   
Sbjct: 367 LSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFG 426

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TY A+I  L  +GK  +     N++++ G++ +  ++N +I  FC    ++KA     
Sbjct: 427 FSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFK 486

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M  K   P++VT N L+ G C+ G + K+       +  G   D  T++++I  LC+ +
Sbjct: 487 EMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAK 546

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           ++EDA G  SEM    L P+  TY  +  +L   G +  + K    M   G         
Sbjct: 547 QIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDG--------- 597

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                   I+P   S++  I   C  G+ +DA ++F      G+  +  TY+  +
Sbjct: 598 --------INPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFI 644



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 118/219 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ VT+NT++D   K G++ + RDLL  + + G  P+  T++ ++ G C+   
Sbjct: 488 MQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQ 547

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+     M      P+  TYN+LI+  C  G +  + +L ++M++  + PDV ++N 
Sbjct: 548 IEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNA 607

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G+  +A KL   +   G+ P+  T+   IK +C+ G+ ++A ++  +ME NG
Sbjct: 608 LIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANG 667

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
             PD  T N ++DA  K    E A ++       G+ +N
Sbjct: 668 CMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVN 706


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 220/427 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P  V +  +L  + K  K + V  L   M+  G+  +  ++ IL+  +C+   L  A+ 
Sbjct: 76  IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    P + T   L+NG+C     +EA  L   M+    +P+VV YNT+IN   
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++     A ++   +++ GI+ +AVT+N +I      G+   A +++R+M +    P+ +
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            +  LID   K GN+ EA  +   M R+ +  N  T N++++  C    L +A  + +  
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G + D V+Y TLITG+ + ++    +KL+ EM  + ++   FTYN +I G  Q+GK 
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A  + N ++  G+ PD  T+N ++   C+ G++EKAL     + +     DI+T NI+
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLCR   L++A   FRS   KG   D++ Y T+IS LC++    +A  L   M+E   
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495

Query: 427 GPDRYTY 433
            P    Y
Sbjct: 496 MPSERIY 502



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 208/436 (47%)

Query: 25  KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
           K ++   L  +M +   +P+   +  +++   K+      + +   M       D++++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           +LI+ +C    L  A  L  +M  L   P +VT  +L+N F +  R  EA  L+D +D  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G  PN V +N +I   CK   ++ A ++   ME+ G   D VTYNTLI     +G   +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            R++  M ++ +  N I    ++ T   E  L EA  L     +R    +  +Y +LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           +        A  ++D M  +   P   TYN +I G  +S + E  + +  E+   G++ D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+NT+IHG+C  G++  A +  N+MV+    PDIVT NILL  LC  G +EKAL    
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                   VD +TYN +I  LC+  +L++A+ L   +  K + PD   Y  + + L   G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 445 RLEEAQKFTSIMVETG 460
              EA K    M E G
Sbjct: 479 LQREADKLCRRMKEDG 494



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 198/384 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  ++  ++    +  +L+    LL  M K G  P+  T   L++G+C+   
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ +VD M     +P+V  YN +ING C    L  A  +   ME   +  D VTYNT
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    SGR  +A +L+ ++ +  I PN +    +I  + KEG + +A  + + M    
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN+LI+  C  G + +A  M D+M  KG   + +T NT++   C  K++++  
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    + +G   D  +Y TLI GY +  K N A K+++ M +  + P   TYN ++  L
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E+A+ M+ +L +S M  D  T+N II G C   ++++A      +  K  KPD 
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           +    ++SGLCR+G+  +A K  R
Sbjct: 465 IAYITMISGLCRKGLQREADKLCR 488



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/294 (38%), Positives = 161/294 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D VTYNT++  L   G+  +   LL DM K+ + PN   +  L+  + K G 
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +   M +   +P+V+TYN LING+C  G L +A  +   M S    PDVVTYNT
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F +S R  +  KL  E+   G+  +A T+N +I  YC+ GK++ A K+   M + G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD VTYN L+D  C  G +E+A  M++ + +  + ++ IT N I+  LC   KL EA+
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            L  S +++G   D ++Y T+I+G  R      A KL   MKE   MPS   Y+
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 217/444 (48%), Gaps = 19/444 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
            ++AF L  EM   + +P +V +  ++    +  +      L  +++  GI  +  +  I
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  +C+  ++  A  ++  M + GF P  VT  +L++  C+    +EA  ++D M   G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              N +  NT+++ LC  + L+ A  +     K+G   D V+Y TLI+G     +   A 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  +M +R+I P+   + A+I    + G   +A ++  E+++  ++P+  T+N++I+GF
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G +  A    + MV K   PD+VT N L++G C+   +E  +K F     +G   D+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            TYNTLI   C+  +L  A  + + M +  + PD  TY  +   L  +G++E+A     +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL----V 415

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           MVE  +               E+D   I+Y+  I   C   + K+A  +F    +KG+  
Sbjct: 416 MVEDLQ-------------KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462

Query: 516 NKSTYMNLMNGLIKRRKSISKAVD 539
           +   Y+ +++GL   RK + +  D
Sbjct: 463 DAIAYITMISGLC--RKGLQREAD 484



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 177/358 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT  ++L+   +  +  E   L+  M   G VPN   YN +++G CK   
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ V   M +     D  TYN LI+G  N+G   +A RL ++M   K+ P+V+ +  
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G  +EA  L  E+    + PN  T+N +I  +C  G +  A  +   M   G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNTLI   CK+  +E+  ++   M  +GL  +  T NT++H  C   KL+ A 
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N     G   D V+Y  L+     + K  +AL + +++++ ++     TYN +I GL
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            ++ K ++A  +   L + G+ PD   + T+I G C +G   +A +   +M E  F P
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 170/329 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+GFG +P+ V YNT+++ L K   LN   ++   M+K+G+  +  TYN L+SG    G 
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A R++  M + K  P+V  +  LI+ +   G L EA  L KEM    ++P+V TYN+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F   G   +A  + D +   G  P+ VT+N +I  +CK  +++   K+   M   G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D  TYNTLI   C+AG +  A ++ + M   G+  + +T N +L  LC   K+++A 
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           +++    K    +D ++Y  +I G  R +K   A  L+  +  + + P    Y  MI GL
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFN 329
            + G   +A  +   + + G +P E  ++
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 18/386 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K D A  +   M ++   P  V +  ++    K    +    +   M   G+  +  +  
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++H  C   +L  A  LL    K G+    V+ G+L+ G+ +  +   A+ L D M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
             +P+   YN +I GL ++     A+++   + + G+  D  T+NT+I G  + G+   A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +    MV++   P+++    L+    +EG L +A   ++  I +    +  TYN+LI+ 
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN- 463
            C    L DA  +   M  K   PD  TY  + T   +S R+E+  K    M   G +  
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 464 --------HQVVQPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQIFE 506
                   H   Q       ++         + P  ++Y+  ++  C+ G+ + AL + E
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++  + ++  TY  ++ GL +  K
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDK 444



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 64/124 (51%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VTYN +LD L   GK+ +   ++ D++K  +  +  TYNI++ G C+   LKEA
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   +T+    PD   Y  +I+G C  G+  EA +L + M+    +P    Y+  +  
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 508

Query: 125 FFES 128
            + S
Sbjct: 509 HYTS 512


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 260/534 (48%), Gaps = 32/534 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP  +  N+I+  L K  ++++   ++  M   G+ P+  TY++++ G CK   + +A
Sbjct: 220 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 279

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV++ M +  + P+  TYN LI+G+  +GM  E+ R+ K+M S  ++P V   N+ I+ 
Sbjct: 280 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 339

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN----MEENG 180
            F+ GR+ EA  + D +   G KP+ ++++ M+  Y      D     V N    M   G
Sbjct: 340 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSCLADVHNIFNLMLTKG 397

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+   +N LI+A  + G M++A  + + M  KG+  +T+T  T++ +LC   +LD+A 
Sbjct: 398 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 457

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY-NAMIWG 299
              N     G    E  YG LI G     +  +A +L  EM  + I P    Y +++I  
Sbjct: 458 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 517

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+  +  D+++ ++Q+G  P+  TFN+++ G+C  G +E+A    + M     +P+
Sbjct: 518 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 577

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
                 L+ G C+ G ++ AL  FR  + KG    SV Y+ ++  L + RR   A  +  
Sbjct: 578 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 637

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTP 475
           EM E       +TY  +   L  +   +EA    +K  ++ V+   I   +V        
Sbjct: 638 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV-------- 689

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  IS   K+      GR ++A ++F+     G+  N  TY  ++  LIK
Sbjct: 690 -------ISAMFKV------GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 730



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-- 58
           M   G +P     N+ + ALFK G+ NE + +   M  +G  P+  +Y+ ++ GY     
Sbjct: 321 MSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD 380

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             L +   + +LM      P+   +N+LIN +   GM+++A  + ++M++  ++PD VT+
Sbjct: 381 SCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 440

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            T+I+     GR  +A    + + + G+ P+   +  +I+  C  G++ KA +++  M  
Sbjct: 441 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 500

Query: 179 NGFSPDCVTY-NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
               P  V Y +++I+  CK G + E   +MD+M + G + N +T N+++   C    ++
Sbjct: 501 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 560

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA+ LL++ +  G   +   YGTL+ GY ++ + + AL ++ +M  + + P++  Y+ ++
Sbjct: 561 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 620

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL Q+ +T  A  M +E+++SG      T+  ++ G C     ++A     K+   + K
Sbjct: 621 HGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 680

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            DI+T NI++S + + G  ++A + F +    G   +  TY+ +I++L KE   E+A  L
Sbjct: 681 FDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 740

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
              +E+     D      I   L+    + +A  + SI+ E
Sbjct: 741 FISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 781



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 233/496 (46%), Gaps = 21/496 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P   TYNIL+  Y ++      + +V  + +N   PD ++Y+ LI G+   G +++A  L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             EM    +LP ++  N++I    +     +A  ++ ++ + GI P+  T++++I   CK
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
              +DKA +++  M E G  P+ +TYN+LI     +G   E+ R+   M   G+      
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR--DEKANRALKLWDE 280
            N+ +H L    + +EA  + +S   +G   D +SY T++ GY    D        +++ 
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  + I P+   +N +I   ++ G  ++A+ +  ++   GMIPD  TF T+I   C  G+
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY-N 399
           ++ AL   N MV+    P       L+ G C  G L KA +     + K      V Y +
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           ++I++LCKE R+ +   ++  M +    P+  T+ ++       G +EEA      M   
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 I+P+   Y   ++ +C  GR  DAL +F +   KG+      
Sbjct: 573 G-----------------IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615

Query: 520 YMNLMNGLIKRRKSIS 535
           Y  +++GL + R++ +
Sbjct: 616 YSIILHGLFQARRTTA 631



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 215/446 (48%), Gaps = 3/446 (0%)

Query: 5   GCLPDNVTYNTILD--ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  PD ++Y+T+L   A      L +V ++ + M  +G+ PN+  +NIL++ Y + G + 
Sbjct: 360 GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 419

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +AM + + M     +PD  T+  +I+  C  G L++A      M  + + P    Y  LI
Sbjct: 420 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 479

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGF 181
                 G  ++A +LI E+    I P  V + + +I   CKEG++ +   I+  M + G 
Sbjct: 480 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 539

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VT+N+L++  C  GNMEEAF ++D M   G++ N     T++   C   ++D+A  
Sbjct: 540 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 599

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +      +G     V Y  ++ G F+  +   A K++ EM E     S  TY  ++ GL 
Sbjct: 600 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 659

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++  T++A  +L +L    +  D  TFN +I      G+ ++A +  + +      P+I 
Sbjct: 660 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 719

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T +++++ L +E   E+A   F S    G A DS   N ++  L  +  +  A   LS +
Sbjct: 720 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 779

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLE 447
            E  L  +  T + + +     G ++
Sbjct: 780 GENNLTLEASTISLLASLFSREGMIK 805



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 184/378 (48%), Gaps = 1/378 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD VT+ T++ +L + G+L++     + M   G+ P+   Y  L+ G C  G 
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 487

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  ++ ++M ++   P V  ++ +IN  C  G + E   +   M      P+VVT+N
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 547

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +L+  +   G   EAF L+D +   GI+PN   +  ++  YCK G+ID A  + R+M   
Sbjct: 548 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 607

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  V Y+ ++    +A     A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 608 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 667

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL          D +++  +I+  F+  +   A +L+D +    ++P+  TY+ MI  
Sbjct: 668 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 727

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +    E+A ++   + +SG   D    N I+    ++ +V KA  + + + E +   +
Sbjct: 728 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLE 787

Query: 360 IVTCNILLSGLCREGILE 377
             T ++L S   REG+++
Sbjct: 788 ASTISLLASLFSREGMIK 805



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 25/277 (9%)

Query: 274 ALKLWDEMKE----RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           A++L+  M      R   P+  TYN +I    +  + +  + ++  LL++G+ PD+ ++ 
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 194

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++I+GF  +G+V+KA     +M+E+   P I+ CN ++  LC+   ++KA    +  +  
Sbjct: 195 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G A D  TY+ +I  LCK + ++ A  +L +M E    P+  TY ++      SG   E+
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 450 QKFTSIMVETGKIN---------HQVVQPNTSKTPEEI---------DPSSISYSEKINE 491
            +    M   G I          H + +   +   + I          P  ISYS  ++ 
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374

Query: 492 H--CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           +   +     D   IF     KGIA NK  +  L+N 
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 411


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 206/433 (47%), Gaps = 51/433 (11%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C P+ V+Y T++   FK+G + +   L   M   G+ PN  T N ++ G CK+  +
Sbjct: 244 DGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAM 303

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  V+  M     +P+  TYN LI+G+ ++G   EA R+ KEM      P+VVTY+ L
Sbjct: 304 DKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSML 363

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           I+   +SG   EA ++ + + + G KPNA T+                            
Sbjct: 364 IDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  NI I  YCK G++D+A      M++ GF PD V Y T+ID  CK G +++A  
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMS 483

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
               M   GL  + IT NT++H      K ++A  L      RG   +  ++ ++I   F
Sbjct: 484 RFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLF 543

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ K   A KL+D M      P+  +YN MI G   +G+  + + +L+++L  G+ P   
Sbjct: 544 KEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAV 603

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           TFNT++ G                MV    KPD+VTC  L+   C +G +E  L  FR  
Sbjct: 604 TFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREM 647

Query: 387 ILKGKAVDSVTYN 399
           + K    D++T N
Sbjct: 648 LGKADKTDTITEN 660



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 236/511 (46%), Gaps = 7/511 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+  ++      G LN     L  + K GL     T+  L+   C      +AM +
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   M +    PDV++Y  L+ G C     EEA  L   M  +     P+VV+Y T+I+ 
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A+ L  ++ +HGI PN VT N +I   CK   +DKA  +++ M +    P+
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+LI     +G   EA R++  M R G + N +T + ++  LC      EA  + N
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  + G   +  +YG+L+ GY  +        + D M +  + P    +N  I+   + G
Sbjct: 382 SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCG 441

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A    N++ Q G +PD   + T+I G C  G+++ A+    +M++    PDI+T N
Sbjct: 442 RLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G    G  EKA + F   + +G   +  T+N++I  L KE ++ +A  L   M   
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT---SKTPEEIDPS 481
              P+  +Y  +      +G + E  K    M+  G +    V  NT         + P 
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG-LKPTAVTFNTLLDGMVSMGLKPD 620

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKG 512
            ++    I+  C  GR +D L +F E   K 
Sbjct: 621 VVTCKTLIDSCCEDGRIEDILTLFREMLGKA 651



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 228/453 (50%), Gaps = 21/453 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC PD  +Y T+L  L  + K  E  +L+  M + G    PN  +Y  ++ G+ K 
Sbjct: 206 MPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKE 265

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G + +A  +   M  +   P+V T N +I+G C    +++A  + ++M    ++P+  TY
Sbjct: 266 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 325

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N+LI+ +  SG+  EA +++ E+   G +PN VT++++I   CK G   +A +I  +M +
Sbjct: 326 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ 385

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G  P+  TY +L+      GN+ +   + D+M + G++      N  ++  C   +LDE
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDE 445

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A +  N   ++G+  D V+Y T+I G  +  + + A+  + +M +  + P   T+N +I 
Sbjct: 446 ASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIH 505

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G +  GK E+A ++  E++  G+ P+  TFN++I     EG+V +A +  + M     KP
Sbjct: 506 GFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKP 565

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN------------------- 399
           ++V+ N ++ G    G + + +K     +L G    +VT+N                   
Sbjct: 566 NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCK 625

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           TLI S C++ R+ED   L  EM  K    D  T
Sbjct: 626 TLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 229/493 (46%), Gaps = 57/493 (11%)

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           K  PD+ T+ +LI+  C+AG L   F    ++    L    VT+  L+       R+ +A
Sbjct: 139 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDA 198

Query: 135 FKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG--FSPDCVTYNTL 191
             ++   + E G  P+  ++  ++K  C E K ++A +++  M E+G    P+ V+Y T+
Sbjct: 199 MNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTV 258

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I    K G++ +A+ +   M   G+  N +T N+++  LC  + +D+A  +L        
Sbjct: 259 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 318

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y +LI GY    +   A+++  EM      P+  TY+ +I  L +SG   +A +
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEARE 378

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQV------------------------------ 341
           + N ++QSG  P+ +T+ +++HG+ +EG +                              
Sbjct: 379 IFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYC 438

Query: 342 ------EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                 E +L F NKM ++ F PDIV    ++ GLC+ G L+ A+  F   I  G + D 
Sbjct: 439 KCGRLDEASLTF-NKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDI 497

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           +T+NTLI       + E A  L  EM ++ + P+  T+ ++   L + G++ EA+K   +
Sbjct: 498 ITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDL 557

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M   G                   P+ +SY+  I+ +   G   + +++ ++    G+  
Sbjct: 558 MPRAGA-----------------KPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 600

Query: 516 NKSTYMNLMNGLI 528
              T+  L++G++
Sbjct: 601 TAVTFNTLLDGMV 613



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 199/426 (46%), Gaps = 20/426 (4%)

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
           K+ PD+ T+  LI+   ++G     F  + ++ + G++  AVT   +++  C E +   A
Sbjct: 139 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDA 198

Query: 170 CKIV-RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLNTI 226
             IV R M E G +PD  +Y TL+   C     EEA  ++ +M   G     N ++  T+
Sbjct: 199 MNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTV 258

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +H    E  + +AY L       G   + V+  ++I G  + +  ++A  +  +M +  I
Sbjct: 259 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 318

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           MP+  TYN++I G   SG+  +A+ +L E+ + G  P+  T++ +I   C  G   +A +
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEARE 378

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             N M++   KP+  T   LL G   EG L          +  G       +N  I + C
Sbjct: 379 IFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYC 438

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           K  RL++A    ++M+++   PD   Y  +   L + GRL++A      M++ G      
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG------ 492

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                      + P  I+++  I+     G+++ A ++F E   +GI  N +T+ ++++ 
Sbjct: 493 -----------LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDK 541

Query: 527 LIKRRK 532
           L K  K
Sbjct: 542 LFKEGK 547



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 59/306 (19%)

Query: 262 ITGYFRDEKANRALKLWDEMKE---RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
           ++   RD  A  A+ +++ M     +++ P   T+  +I     +G        L ++++
Sbjct: 114 VSSSVRDGPA-LAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIK 172

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQF-HNKMVEKSFKPDIVTCNILLSGLC------ 371
           +G+     TF  ++   C+E +   A+     +M E    PD+ +   LL GLC      
Sbjct: 173 TGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCE 232

Query: 372 -------------------------------REGILEKALKFFRSWILKGKAVDSVTYNT 400
                                          +EG + KA   F   +  G   + VT N+
Sbjct: 233 EAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNS 292

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           +I  LCK + ++ A  +L +M ++ + P+  TY ++    + SG+  EA +    M   G
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 352

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           +                  P+ ++YS  I+  C  G + +A +IF    Q G   N STY
Sbjct: 353 Q-----------------RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTY 395

Query: 521 MNLMNG 526
            +L++G
Sbjct: 396 GSLLHG 401



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 28/235 (11%)

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK--------ALQFHNKMVE---KS 355
           E A+D+ +ELLQ          N ++    +   V          A+   N+M     K 
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTV-ARAPVSSSVRDGPALAVSMFNRMARAGAKK 139

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             PDI T  IL+S  C  G L          I  G    +VT+  L+ +LC E+R  DA 
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199

Query: 416 GL-LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
            + L  M E    PD ++Y  +   L    + EEA +   +M E G              
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDG-------------- 245

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +   P+ +SY+  I+    +G    A  +F +    GI  N  T  ++++GL K
Sbjct: 246 -DNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCK 299


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 234/464 (50%), Gaps = 2/464 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYNT+++ L K+ K+     + ++M    L PNR TYNIL+ G+C  G  ++A+R+
Sbjct: 78  PNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRL 137

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D+M      PD   Y  L++G       + A  L + +    ++     Y  +I+   +
Sbjct: 138 LDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCK 197

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G   E+ +L+D + + G  P+ +T +++I  +CK GKI  A +++  M + G +P+ V 
Sbjct: 198 HGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVI 257

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TLI  +CK G++ EAFR    M R G  ++    N ++ +LC   ++ EA   +   S
Sbjct: 258 YATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMS 317

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                 + +++  +I GY     A +A  ++DEM +    PS FTY +++ GL + G   
Sbjct: 318 TIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLR 377

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +L +L       D   +NTI+   C  G++  A+    +MV+ +  PD  T  I+L
Sbjct: 378 EAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIIL 437

Query: 368 SGLCREGILEKALKFFRSWILKGK-AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +GL R+G +  AL FF   + +G  + + V Y +L   L K  +   A  +  EME K +
Sbjct: 438 AGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGI 497

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
            PD     A+       G++E+ +K   I +++G +   +   N
Sbjct: 498 NPDTIAINAVLDGYSRMGKMEKVEKLF-IKMQSGSLTPSLATYN 540



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 248/526 (47%), Gaps = 53/526 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T++ +++   K GK+   ++++  M K GL PN   Y  L+   CK G + EA
Sbjct: 215 GASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEA 274

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R    MT+     D +  N+LI+  C AG + EA    + M ++ L P+ +T++ +IN 
Sbjct: 275 FRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIING 334

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G +++AF + DE+ + G  P+  T+  ++K  CK G + +A K++  +     + D
Sbjct: 335 YGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVD 394

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YNT++   CK G + +A  +   M +  +  ++ T   IL  L  + K+  A +   
Sbjct: 395 TNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFE 454

Query: 245 SASKRGYY-LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            A  RG    ++V Y +L  G F+  ++N A  +++EM+ + I P T   NA++ G S+ 
Sbjct: 455 KALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRM 514

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK E+   +  ++    + P   T+N ++HG+  +  + K  +F+N M      PD +TC
Sbjct: 515 GKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTC 574

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           + ++ GLC+ G+L+   K  +  I++   VD +T N LI++ C+  ++  AF LL+    
Sbjct: 575 HSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNL 634

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
             + PD  TY AI T L  +  L E+                                  
Sbjct: 635 LGIIPDVNTYNAIFTGLNRASALRESH--------------------------------- 661

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                               +  +  ++GI    + Y++L+NG+ +
Sbjct: 662 -------------------LLLHDMLERGITPTSTQYISLINGMCR 688



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 228/464 (49%), Gaps = 17/464 (3%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M  +  +P + TYN ++N  C  G  + A  L   MES  +  DV TYN LI+   ++ R
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           S + + L+ ++ +  I PN  T+N +I    KE KI  A ++   M     SP+ VTYN 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID +C  GN E+A R++DVM  KGL+ + +    +L  L    K D A  L+      G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             +   +Y  +I G  +    + +L+L D M +    P   T++ +I G  ++GK + A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           +++ ++ ++G+ P+   + T+I+  C +G + +A + +  M       D   CN+L+S L
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR G + +A  F R       A +S+T++ +I+          AF +  EM +    P  
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           +TY ++   L + G L EA+K         K++H          P  +D +   Y+  ++
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLY------KLHH---------IPAAVDTN--IYNTILS 403

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           E C +G+  DA+ +F E  Q  +  +  TY  ++ GL ++ K +
Sbjct: 404 ETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMV 447



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 244/550 (44%), Gaps = 54/550 (9%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M+  G VP   TYN +++  CK G  K A  ++D M       DV TYNMLI+  C    
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
             + + L K+M    + P+  TYNTLIN   +  +   A ++ +E+    + PN VT+NI
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL------------------------ 191
           +I  +C  G  ++A +++  ME  G  PD V Y  L                        
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 192 -----------IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
                      ID  CK G ++E+ +++D+M + G   + IT + +++  C   K+  A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++    K G   + V Y TLI    +      A + +  M         F  N +I  L
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+  +A D +  +    + P+  TF+ II+G+   G   KA    ++M++    P  
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   LL GLC+ G L +A K          AVD+  YNT++S  CK  +L DA  L  E
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGE 420

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN-------------HQVV 467
           M +  + PD +TYA I   L   G++  A  F    +  G ++              +V 
Sbjct: 421 MVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVG 480

Query: 468 QPNTSKTPEE------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
           Q N +    E      I+P +I+ +  ++ +   G+ +   ++F + +   +  + +TY 
Sbjct: 481 QSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYN 540

Query: 522 NLMNGLIKRR 531
            L++G  K++
Sbjct: 541 ILLHGYSKKK 550



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 222/482 (46%), Gaps = 37/482 (7%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P + TY ++L  L K G L E + LL  +       +   YN ++S  CK G L +
Sbjct: 354 LGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSD 413

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAG-MLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           A+ +   M Q   LPD  TY +++ G    G M+       K +    L P+ V Y +L 
Sbjct: 414 AVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLF 473

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +  F+ G+S  A  + +E++  GI P+ +  N ++  Y + GK++K  K+   M+    +
Sbjct: 474 DGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLT 533

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P   TYN L+    K  ++ +  +  ++M R G+  + +T ++I+  LC    LD  + +
Sbjct: 534 PSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKM 593

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L         +D+++   LIT     +K  +A  L +      I+P   TYNA+  GL++
Sbjct: 594 LKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNR 653

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM----------- 351
           +    ++  +L+++L+ G+ P  T + ++I+G C  G ++ A +  ++M           
Sbjct: 654 ASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVA 713

Query: 352 ------------------------VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
                                   ++K   P + T   L+  LC++  L +ALK      
Sbjct: 714 ESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMA 773

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL-VESGRL 446
           L G  +D V YN LIS LC +     AF L  EM+E+ L P+  TY  +  A+    G +
Sbjct: 774 LYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEV 833

Query: 447 EE 448
           EE
Sbjct: 834 EE 835



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 210/429 (48%), Gaps = 2/429 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG-LVPNRTTYNILVSGYCKLG 59
           M  F  LPD+ TY  IL  L +KGK+            +G L PN+  Y  L  G  K+G
Sbjct: 421 MVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVG 480

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
               A  + + M      PD    N +++G+   G +E+  +L  +M+S  L P + TYN
Sbjct: 481 QSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYN 540

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            L++ + +    ++  K  + +   GI P+ +T + +I   CK G +D   K+++ M   
Sbjct: 541 ILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIME 600

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
               D +T N LI  +C+   M +AF ++++    G+  +  T N I   L     L E+
Sbjct: 601 DTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRES 660

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           ++LL+   +RG       Y +LI G  R      A +L DEM+   +       +AM+ G
Sbjct: 661 HLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRG 720

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L+Q GK E+A+ +L+ +LQ  +IP   TF T++H  C + ++ +AL+   KM     K D
Sbjct: 721 LAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLD 780

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC-KERRLEDAFGLL 418
           +V  N+L+SGLC +G    A   +     +G   ++ TY TLI ++   E  +E+   + 
Sbjct: 781 VVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVY 840

Query: 419 SEMEEKKLG 427
            E  EK +G
Sbjct: 841 LEQFEKLVG 849


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 260/534 (48%), Gaps = 32/534 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP  +  N+I+  L K  ++++   ++  M   G+ P+  TY++++ G CK   + +A
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV++ M +  + P+  TYN LI+G+  +GM  E+ R+ K+M S  ++P V   N+ I+ 
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN----MEENG 180
            F+ GR+ EA  + D +   G KP+ ++++ M+  Y      D     V N    M   G
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSCLADVHNIFNLMLTKG 417

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+   +N LI+A  + G M++A  + + M  KG+  +T+T  T++ +LC   +LD+A 
Sbjct: 418 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 477

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY-NAMIWG 299
              N     G    E  YG LI G     +  +A +L  EM  + I P    Y +++I  
Sbjct: 478 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 537

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+  +  D+++ ++Q+G  P+  TFN+++ G+C  G +E+A    + M     +P+
Sbjct: 538 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 597

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
                 L+ G C+ G ++ AL  FR  + KG    SV Y+ ++  L + RR   A  +  
Sbjct: 598 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 657

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTP 475
           EM E       +TY  +   L  +   +EA    +K  ++ V+   I   +V        
Sbjct: 658 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV-------- 709

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  IS   K+      GR ++A ++F+     G+  N  TY  ++  LIK
Sbjct: 710 -------ISAMFKV------GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 750



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-- 58
           M   G +P     N+ + ALFK G+ NE + +   M  +G  P+  +Y+ ++ GY     
Sbjct: 341 MSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD 400

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             L +   + +LM      P+   +N+LIN +   GM+++A  + ++M++  ++PD VT+
Sbjct: 401 SCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 460

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            T+I+     GR  +A    + + + G+ P+   +  +I+  C  G++ KA +++  M  
Sbjct: 461 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 520

Query: 179 NGFSPDCVTY-NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
               P  V Y +++I+  CK G + E   +MD+M + G + N +T N+++   C    ++
Sbjct: 521 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 580

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA+ LL++ +  G   +   YGTL+ GY ++ + + AL ++ +M  + + P++  Y+ ++
Sbjct: 581 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 640

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL Q+ +T  A  M +E+++SG      T+  ++ G C     ++A     K+   + K
Sbjct: 641 HGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 700

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            DI+T NI++S + + G  ++A + F +    G   +  TY+ +I++L KE   E+A  L
Sbjct: 701 FDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 760

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
              +E+     D      I   L+    + +A  + SI+ E
Sbjct: 761 FISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 801



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 233/496 (46%), Gaps = 21/496 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P   TYNIL+  Y ++      + +V  + +N   PD ++Y+ LI G+   G +++A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             EM    +LP ++  N++I    +     +A  ++ ++ + GI P+  T++++I   CK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
              +DKA +++  M E G  P+ +TYN+LI     +G   E+ R+   M   G+      
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR--DEKANRALKLWDE 280
            N+ +H L    + +EA  + +S   +G   D +SY T++ GY    D        +++ 
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  + I P+   +N +I   ++ G  ++A+ +  ++   GMIPD  TF T+I   C  G+
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY-N 399
           ++ AL   N MV+    P       L+ G C  G L KA +     + K      V Y +
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           ++I++LCKE R+ +   ++  M +    P+  T+ ++       G +EEA      M   
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 I+P+   Y   ++ +C  GR  DAL +F +   KG+      
Sbjct: 593 G-----------------IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 520 YMNLMNGLIKRRKSIS 535
           Y  +++GL + R++ +
Sbjct: 636 YSIILHGLFQARRTTA 651



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 216/451 (47%), Gaps = 3/451 (0%)

Query: 5   GCLPDNVTYNTILD--ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  PD ++Y+T+L   A      L +V ++ + M  +G+ PN+  +NIL++ Y + G + 
Sbjct: 380 GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 439

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +AM + + M     +PD  T+  +I+  C  G L++A      M  + + P    Y  LI
Sbjct: 440 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 499

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGF 181
                 G  ++A +LI E+    I P  V + + +I   CKEG++ +   I+  M + G 
Sbjct: 500 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 559

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VT+N+L++  C  GNMEEAF ++D M   G++ N     T++   C   ++D+A  
Sbjct: 560 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 619

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +      +G     V Y  ++ G F+  +   A K++ EM E     S  TY  ++ GL 
Sbjct: 620 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 679

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++  T++A  +L +L    +  D  TFN +I      G+ ++A +  + +      P+I 
Sbjct: 680 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 739

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T +++++ L +E   E+A   F S    G A DS   N ++  L  +  +  A   LS +
Sbjct: 740 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 799

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            E  L  +  T + + +     G+  E  K 
Sbjct: 800 GENNLTLEASTISLLASLFSREGKYREHIKL 830



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 1/386 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD VT+ T++ +L + G+L++     + M   G+ P+   Y  L+ G C  G 
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 507

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  ++ ++M ++   P V  ++ +IN  C  G + E   +   M      P+VVT+N
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 567

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +L+  +   G   EAF L+D +   GI+PN   +  ++  YCK G+ID A  + R+M   
Sbjct: 568 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 627

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  V Y+ ++    +A     A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 628 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 687

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL          D +++  +I+  F+  +   A +L+D +    ++P+  TY+ MI  
Sbjct: 688 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 747

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +    E+A ++   + +SG   D    N I+    ++ +V KA  + + + E +   +
Sbjct: 748 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLE 807

Query: 360 IVTCNILLSGLCREGILEKALKFFRS 385
             T ++L S   REG   + +K   +
Sbjct: 808 ASTISLLASLFSREGKYREHIKLLPA 833



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 31/280 (11%)

Query: 274 ALKLWDEMKE----RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           A++L+  M      R   P+  TYN +I    +  + +  + ++  LL++G+ PD+ ++ 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 214

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++I+GF  +G+V+KA     +M+E+   P I+ CN ++  LC+   ++KA    +  +  
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G A D  TY+ +I  LCK + ++ A  +L +M E    P+  TY ++      SG   E+
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 450 QK-------------------FTSIMVETGKINHQ--VVQPNTSKTPEEIDPSSISYSEK 488
            +                   F   + + G+ N    +      K P+   P  ISYS  
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK---PDIISYSTM 391

Query: 489 INEH--CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           ++ +   +     D   IF     KGIA NK  +  L+N 
Sbjct: 392 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 431


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 214/405 (52%), Gaps = 3/405 (0%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+ ++ N L++G      +  A +      + +  PD++T+N +I+G C  G L +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK---LIDELDEHGIKPNAVTHNIMIKW 159
            K++++  L P V TYN+LI+ + + G +   +    L+ E+ E GI P AVT  ++I  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           YCK      A ++   M++ G +   VTYN+LI   C  G +EE  ++M+ M   GL  N
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            IT   +L   C +  + +A   ++  ++R    D V Y  LI GY R  K   A+ + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M ++ I P+  TYN +I G S+SG    A  +L+E+ + G+  D  T+N +I   C +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           +V KA++  ++M E   +P+ +T N ++ G C +G ++ A +         K  + VTYN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             I   C+  ++++A  LL+EM +K L P+  TY  I   ++E G
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 196/398 (49%), Gaps = 40/398 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+NT++  L + G+L +  D+  D+K  GL P+  TYN L+ GYCK G     M  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGN-MYH 247

Query: 68  VDL----MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           VD+    M +    P   T+ +LING+C       A R+ +EM+   +   VVTYN+LI+
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G+  E  KL++E+++ G+ PN +T   ++K +CK+G +  A   +  M E    P
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V Y  LID   + G ME+A  + + M +KG+  N  T                     
Sbjct: 368 DVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTT--------------------- 406

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                         Y  LITG+ R      A  L DEMKE+ I     TYN +I  L   
Sbjct: 407 --------------YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A+ +L+E+ + G+ P+  T+NTII GFC +G ++ A +   +M +   + ++VT 
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           N+ +   C+ G +++A       + K    + +TY T+
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 194/368 (52%), Gaps = 19/368 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKG---KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           ++ +G  P   TYN+++D   KKG    +  V  LL +M + G+ P   T+ +L++GYCK
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
                 A+RV + M Q      V TYN LI+G C+ G +EE  +L +EME L L P+ +T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +  ++  F + G   +A   ID + E  ++P+ V + I+I  Y + GK++ A  +   M 
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMA 396

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G SP+  TYN LI    ++G+   A  ++D M  KG++ + +T N ++  LCC+ ++ 
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVR 456

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL+  S+ G   + ++Y T+I G+        A ++   M++ +   +  TYN  I
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFI 516

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               Q GK ++A D+LNE+L   ++P+  T+ TI  G                M+EK + 
Sbjct: 517 KYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MMEKGYT 560

Query: 358 PDIVTCNI 365
           PDI  C +
Sbjct: 561 PDIRGCTV 568



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 196/395 (49%), Gaps = 13/395 (3%)

Query: 72  TQNKSLPDVWTYNMLINGWCNA---GMLEEAFR--LRKEMESLKLLPDVVTYNTLINRFF 126
           +  +  P   + N L+ G   A    + E+AFR  LR+ +      PD+ T+NT+I+   
Sbjct: 148 SHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS-----PDIYTFNTVISGLC 202

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI---VRNMEENGFSP 183
             G+  +A  +  ++   G+ P+  T+N +I  YCK+G       +   ++ M E G SP
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VT+  LI+  CK  N   A R+ + M ++G+  + +T N+++  LC E K++E   L+
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   +E+++G ++ G+ +      A    D M ER + P    Y  +I G  + 
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRL 382

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK E A+ +   + + G+ P+ TT+N +I GF   G    A    ++M EK  + D+VT 
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+L+  LC +G + KA+K        G   + +TYNT+I   C +  ++ A+ + + ME+
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +   +  TY        + G+++EA    + M++
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 24/406 (5%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           + R  +  R+ +AF L  E      +P+  + N ++       ++D A K  R+      
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRH-RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRV 187

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
           SPD  T+NT+I   C+ G + +A  +   +   GL  +  T N+++   C +      Y 
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 241 --MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
             MLL    + G     V++G LI GY ++     A+++++EMK++ I  S  TYN++I 
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL   GK E+ + ++ E+   G+ P+E TF  ++ GFC +G +  A  + + M E++ +P
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+V   IL+ G  R G +E A+    +   KG + +  TYN LI+   +      A GLL
Sbjct: 368 DVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM+EK +  D  TY  +  AL   G + +A K    M E G                 +
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG-----------------L 470

Query: 479 DPSSISYSEKINEHCSQGRYKDALQI---FEETRQKGIAINKSTYM 521
           +P+ ++Y+  I   C +G  K A +I    E+ R++   +  + ++
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFI 516



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 25/295 (8%)

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A++L   +  R +     S   L+ G    ++ + A K +     R++ P  +T+N +I
Sbjct: 140 DAFLLAGESHPR-HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVI 198

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH-----NKMV 352
            GL + G+  +A D+  ++   G+ P   T+N++I G+C +G       +H      +MV
Sbjct: 199 SGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGN--MYHVDMLLKEMV 256

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           E    P  VT  +L++G C+      A++ F     +G A   VTYN+LIS LC E ++E
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +   L+ EME+  L P+  T+  +     + G + +A  +   M E              
Sbjct: 317 EGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE-------------- 362

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                ++P  + Y+  I+ +   G+ +DA+ + E   +KGI+ N +TY  L+ G 
Sbjct: 363 ---RNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 26/214 (12%)

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA--- 379
           P  ++ N ++ G     +V+ A +     + +   PDI T N ++SGLCR G L KA   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG---LLSEMEEKKLGPDRYTYAAI 436
            K  ++W   G A    TYN+LI   CK+    + +    LL EM E  + P   T+  +
Sbjct: 214 AKDIKAW---GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                ++     A +    M + G                 I  S ++Y+  I+  CS+G
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQG-----------------IAASVVTYNSLISGLCSEG 313

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           + ++ +++ EE    G++ N+ T+  ++ G  K+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +P   + N LL+GL     ++ A K FRS + +  + D  T+NT+IS LC+  +L  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVE---SGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           +  +++   L P   TY ++     +   +G +         MVE G             
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG------------- 259

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               I P+++++   IN +C       A+++FEE +Q+GIA +  TY +L++GL    K
Sbjct: 260 ----ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 224/454 (49%), Gaps = 6/454 (1%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           +++N +L AL K    ++V  L   M   GL PN  T NIL++  C +  ++E +  +  
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +   +PDV TY  LI G C    + EA RL   M+ L   P+VVTY TLI     +G 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 131 SMEAFKLIDEL----DEHGI--KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              A KL  E+      + I  KPN  ++NI+I   CK GK  +A ++   M + G  PD
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT++ LID  CK G + EA + ++ M  +G+  +  T  +++   C    LD A  L  
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S   +GY  D +SY  LI GY +      A+KL++EM      P   T+  ++ GL  +G
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K   A  +   +    +  +    +  + G C  G + +A++  N++   + K DI + N
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFN 451

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ GLC+   LE A + F     +G   D VTY  +I+  CK  ++++A  L   MEE 
Sbjct: 452 CLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEEN 511

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
              P+  TY+A+     ++ +LEE  K    M++
Sbjct: 512 GCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQ 545



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 240/507 (47%), Gaps = 30/507 (5%)

Query: 22  KKGKLNEVRDL-LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           KKG +   + L   D+  + ++    ++N+L+    K+    +   +   M      P+ 
Sbjct: 71  KKGNITSTQALQFFDLMMRSII----SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           +T N+LIN  CN   + E       +     +PDVVTY +LI       R  EA +L   
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV-------TYNTLID 193
           + + G  PN VT+  +IK  C+ G I+ A K+ + M  NG SP  +       +YN +ID
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEML-NGTSPYAINCKPNIFSYNIIID 245

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK G  +EA R+ + M  +G++ + +T + ++ TLC E  + EA   L +   RG   
Sbjct: 246 ELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVP 305

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D  ++ +LI G+      + A +L+  M  +   P   +Y  +I+G  ++   E+A+ + 
Sbjct: 306 DLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLY 365

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           NE+L+ G  PD  TF  ++ G    G+V  A +    +   +   ++  C++ L GLC+ 
Sbjct: 366 NEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKN 425

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G L +A++ F         +D  ++N LI  LCK R+LE A+ L  ++ ++ L PD  TY
Sbjct: 426 GCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTY 485

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +     ++G+++ A     +M E G                   P+ ++YS  ++   
Sbjct: 486 CIMINGFCKNGQVDNANILFQMMEENG-----------------CTPNLLTYSALLHGFY 528

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTY 520
              + ++ +++  +  QK +++  S Y
Sbjct: 529 KNNKLEEVVKLLHKMIQKDVSLAASIY 555



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 210/427 (49%), Gaps = 6/427 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY +++  L  + +++E   L   M+K G  PN  TY  L+ G C+ G +  A
Sbjct: 156 GYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLA 215

Query: 65  MRVVDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           +++   M    S       P++++YN++I+  C  G  +EA RL  EM    + PDVVT+
Sbjct: 216 LKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTF 275

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + LI+   + G  +EA K ++ +   GI P+  T   +I+ +C  G +D A ++  +M  
Sbjct: 276 SALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPS 335

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G+ PD ++Y  LI   CK  N+EEA ++ + M R G   +  T   +L  L    K+ +
Sbjct: 336 KGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGD 395

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L           +       + G  ++     A++L++E+K   +     ++N +I 
Sbjct: 396 AKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLID 455

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++ K E A ++  +L Q G+ PD  T+  +I+GFC  GQV+ A      M E    P
Sbjct: 456 GLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTP 515

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           +++T + LL G  +   LE+ +K     I K  ++ +  Y  +   + K+ +  +   +L
Sbjct: 516 NLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 575

Query: 419 SEMEEKK 425
                +K
Sbjct: 576 QRFPVQK 582



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 177/360 (49%), Gaps = 6/360 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ------GLVPNRTTYNILVSG 54
           M+  GC P+ VTY T++  L + G +N    L  +M            PN  +YNI++  
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            CK+G  KEA R+ + M      PDV T++ LI+  C  GM+ EA +  + M    ++PD
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           + T+ +LI  F   G    A +L   +   G +P+ +++ ++I  YCK   +++A K+  
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M   G  PD  T+  L+     AG + +A ++  V+    +  N    +  L  LC   
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNG 426

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            L EA  L N        LD  S+  LI G  +  K   A +L++++ +  + P   TY 
Sbjct: 427 CLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYC 486

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            MI G  ++G+ + A  +   + ++G  P+  T++ ++HGF    ++E+ ++  +KM++K
Sbjct: 487 IMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 16/224 (7%)

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
           + QA+   + +++S +     +FN ++          +    + KM      P+  T NI
Sbjct: 77  STQALQFFDLMMRSII-----SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNI 131

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++ LC    + + L      + +G   D VTY +LI  LC E R+ +A  L   M++  
Sbjct: 132 LINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG 191

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P+  TY  +   L  +G +  A K            HQ +   TS       P+  SY
Sbjct: 192 CWPNVVTYGTLIKGLCRTGNINLALKL-----------HQEMLNGTSPYAINCKPNIFSY 240

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I+E C  G++K+A ++F E   +G+  +  T+  L++ L K
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCK 284


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 229/453 (50%), Gaps = 40/453 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG  C      YN+++DA  K G   +   +   M + GL P+  T+N+L++ + K   
Sbjct: 80  MEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKR 139

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +    ++ + M      P+V TY++LI+  C  G +E+A ++  +M+S    P++ TY +
Sbjct: 140 VDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTS 199

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +SG   +AF L +E+   G+    V +N +I    + G+ D A K+ R M   G
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT+ +L+     AG   EA R+       G  ++    N ++ TLC  K+LDEA+
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                                              +++ E++E  ++P  +T+NA++ GL
Sbjct: 320 -----------------------------------EIFGELEEDGLVPDVYTFNALMDGL 344

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+   A  +L ++ ++G  PD T +NT+I G    G+VE+A Q   +M    ++PD+
Sbjct: 345 CKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDV 404

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N L+   C+ G +E AL+ F     KG A ++VTYNT+++ LC   R+++A+ L + 
Sbjct: 405 VTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNG 463

Query: 421 MEEKK----LGPDRYTYAAIHTALVESGRLEEA 449
           M+++     + PD  TY  +     ++G  E A
Sbjct: 464 MKQETVDGVIDPDFVTYTTLLNGARQAGLSELA 496



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 216/441 (48%), Gaps = 16/441 (3%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L  GY   G L++++  +  M  ++       YN LI+ +  AG  ++A  + + M    
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L PD  T+N L+N F ++ R    +KL +E+      PN +T++I+I   CK G ++KA 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           K+  +M+  G  P+  TY ++ID   K+G++++AF + + M  +GL    +  N+++H L
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
               + D A  L      +G   D V++ +L+ G     +A+ A +++ E ++       
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             YN +I  L +S + ++A ++  EL + G++PD  TFN ++ G C  G++  A      
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           M      PD+   N L+ GL + G +E+A +        G   D VTYNTLI   CK  R
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQP 469
           +EDA  L  E+  K    +  TY  I   L  +GR++EA K F  +  ET          
Sbjct: 420 IEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQET---------- 468

Query: 470 NTSKTPEEIDPSSISYSEKIN 490
                   IDP  ++Y+  +N
Sbjct: 469 ----VDGVIDPDFVTYTTLLN 485



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 200/398 (50%), Gaps = 21/398 (5%)

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +S+EA K    ++ H     A  +N +I  + K G   KA  + R M ++G  PD  T+N
Sbjct: 72  KSVEALK---RMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFN 128

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            L++A  KA  ++  +++ + M  +    N IT + ++  +C    +++A  +      R
Sbjct: 129 VLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSR 188

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   +  +Y ++I G  +    ++A  L++EM    ++ +   YN++I GL +SG+ + A
Sbjct: 189 GCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAA 248

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +  E+L  G+ PD  TF ++++G    G+  +A +   +  +     D+   N+L+  
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LC+   L++A + F      G   D  T+N L+  LCK  R+ DAF LL +M+     PD
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPD 368

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
              Y  +   L +SGR+EEA +   +++E   + ++              P  ++Y+  I
Sbjct: 369 VTVYNTLIDGLRKSGRVEEAGQ---LLLEMQSLGYE--------------PDVVTYNTLI 411

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +E C  GR +DAL++FEE   KG A N  TY  ++NGL
Sbjct: 412 DESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGL 448



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 18/295 (6%)

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           L   +Y +LI  + +     +AL ++  M +  + P T+T+N ++    ++ + +    +
Sbjct: 87  LTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKL 146

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
             E+      P+  T++ +I   C  G VEKAL+    M  +  +P+I T   ++ GL +
Sbjct: 147 FEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGK 206

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G ++KA   F     +G     V YN+LI  L +  R + A  L  EM  K L PD  T
Sbjct: 207 SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVT 266

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETG---KINHQVVQPNTSKTPEEID---------- 479
           + ++   L  +GR  EA++      + G    +N   V  +T    + +D          
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELE 326

Query: 480 -----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                P   +++  ++  C  GR  DA  +  + ++ G   + + Y  L++GL K
Sbjct: 327 EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRK 381



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 17/164 (10%)

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L  G    G+LEK+++  +       A+ +  YN+LI +  K    + A  +   M +  
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L PD YT+  +  A  ++ R++   K    M       +Q   PN            I+Y
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM------QNQNCSPNV-----------ITY 162

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           S  I+  C  G  + AL++F + + +G   N  TY ++++GL K
Sbjct: 163 SILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGK 206


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 257/521 (49%), Gaps = 19/521 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V+ + +L+   +  K      +L+ M K+G   N   +NIL+ G C+     +A+ ++  
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +N  +PDV++YN +I G+C    LE+A  L  EM+       +VT+  LI+ F ++G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA   + E+   G++ + V +  +I+ +C  G++D+   +   + E G SP  +TYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   CK G ++EA  + + M  +G++ N  T   ++  LC   K  EA  LLN   ++ 
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V+Y  +I    +D     A+++ + MK+R+  P   TYN ++ GL   G  ++A 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 311 DMLNELLQ--SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            +L  +L+  S   PD  ++N +IHG C E ++ +AL  ++ +VEK    D VT NILL+
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
              + G + KA++ ++         +S TY  +I   CK   L  A GLL +M   +L P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
             + Y  + ++L + G L++A +    M                       P  +S++  
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-----------------PDVVSFNIM 570

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+     G  K A  +     + G++ +  TY  L+N  +K
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 232/456 (50%), Gaps = 2/456 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  +YNT++    +  +L +  +L ++MK  G   +  T+ IL+  +CK G + EAM 
Sbjct: 174 MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M       D+  Y  LI G+C+ G L+    L  E+      P  +TYNTLI  F 
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G+  EA ++ + + E G++PN  T+  +I   C  GK  +A +++  M E    P+ V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN +I+  CK G + +A  ++++M ++  + + IT N +L  LC +  LDEA  LL   
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 247 SKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            K   Y D   +SY  LI G  ++ + ++AL ++D + E+       T N ++    ++G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A+++  ++  S ++ +  T+  +I GFC  G +  A     KM     +P +   N
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LLS LC+EG L++A + F          D V++N +I    K   ++ A  LL  M   
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L PD +TY+ +    ++ G L+EA  F   MV++G
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 234/460 (50%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G GC    VT+  ++DA  K GK++E    L +MK  GL  +   Y  L+ G+C  G 
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L     + D + +    P   TYN LI G+C  G L+EA  + + M    + P+V TY  
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G++ EA +L++ + E   +PNAVT+NI+I   CK+G +  A +IV  M++  
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLNTILHTLCCEKKLDE 238
             PD +TYN L+   C  G+++EA +++ +M +       + I+ N ++H LC E +L +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  + +   ++    D V+   L+    +    N+A++LW ++ + +I+ ++ TY AMI 
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  ++G    A  +L ++  S + P    +N ++   C EG +++A +   +M   +  P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+V+ NI++ G  + G ++ A          G + D  TY+ LI+   K   L++A    
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +M +    PD +   ++    +  G  ++  +    +V+
Sbjct: 623 DKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 208/435 (47%), Gaps = 19/435 (4%)

Query: 97  EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
           E AF   ++M       + V+ + L+  + +  ++  AF ++  + + G   N   HNI+
Sbjct: 89  ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +K  C+  +  KA  ++R M  N   PD  +YNT+I   C+   +E+A  + + M   G 
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             + +T   ++   C   K+DEA   L      G   D V Y +LI G+    + +R   
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L+DE+ ER   P   TYN +I G  + G+ ++A ++   +++ G+ P+  T+  +I G C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G+ ++ALQ  N M+EK  +P+ VT NI+++ LC++G++  A++       +    D++
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 397 TYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           TYN L+  LC +  L++A  LL  M  +     PD  +Y A+   L +  RL +A     
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           ++VE      +V                 + +  +N     G    A++++++     I 
Sbjct: 449 LLVEKLGAGDRV-----------------TTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 515 INKSTYMNLMNGLIK 529
            N  TY  +++G  K
Sbjct: 492 RNSDTYTAMIDGFCK 506



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 186/365 (50%), Gaps = 3/365 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  ++D L   GK  E   LL+ M ++   PN  TYNI+++  CK G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
           + +V+LM + ++ PD  TYN+L+ G C  G L+EA +L   M  +S    PDV++YN LI
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   +  R  +A  + D L E     + VT NI++    K G ++KA ++ + + ++   
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            +  TY  +ID  CK G +  A  ++  M    L+ +    N +L +LC E  LD+A+ L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                +   + D VS+  +I G  +      A  L   M    + P  FTY+ +I    +
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI-V 361
            G  ++AI   ++++ SG  PD    ++++    S+G+ +K  +   K+V+K    D  +
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671

Query: 362 TCNIL 366
           TC ++
Sbjct: 672 TCTVM 676



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 144/320 (45%), Gaps = 45/320 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWLKEAM 65
           PDN+TYN +L  L  KG L+E   LL  M K      P+  +YN L+ G CK   L +A+
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 66  RVVDLMTQ-----------------------NKSLPDVW-------------TYNMLING 89
            + DL+ +                       NK++ ++W             TY  +I+G
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM-ELWKQISDSKIVRNSDTYTAMIDG 503

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +C  GML  A  L  +M   +L P V  YN L++   + G   +A++L +E+      P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            V+ NIMI    K G I  A  ++  M   G SPD  TY+ LI+   K G ++EA    D
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G + +    +++L     + + D+   L+     +   LD+    T +  Y  + 
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT-VMDYMCNS 682

Query: 270 KAN-----RALKLWDEMKER 284
            AN     R L++ D+ +ER
Sbjct: 683 SANMDLAKRLLRVTDDKEER 702


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 230/439 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P  + ++ +L A+ K  K + V      M+  G+  N  TYNIL++ +C+   L  A+ 
Sbjct: 75  FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  M +    PD+ T N L+NG+C+   + +A  L  +M  +   PD VT+ TLI+  F
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
              ++ EA  LID + + G +P+ VT+  ++   CK G  D A  ++  ME      + V
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y+T+ID+ CK  + ++A  +   M  KG++ N IT ++++  LC   +  +A  LL+  
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +R    + V++  LI  + +  K  +A KL++EM +R I P+ FTY+++I G     + 
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            +A  ML  +++   +P+  T+NT+I+GFC   +V+K ++   +M ++    + VT   L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G  +    + A   F+  +  G   + +TYN L+  LCK  +L  A  +   ++   +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 427 GPDRYTYAAIHTALVESGR 445
            PD YTY  +   + ++G+
Sbjct: 495 EPDIYTYNIMIEGMCKAGK 513



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 209/389 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT N++L+      ++++   L+  M + G  P+  T+  L+ G      
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ ++D M Q    PD+ TY  ++NG C  G  + A  L  +ME+ K+  +VV Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +A  L  E++  G++PN +T++ +I   C  G+   A +++ +M E  
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VT++ LIDA  K G + +A ++ + M ++ +  N  T +++++  C   +L EA 
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    ++    + V+Y TLI G+ + ++ ++ ++L+ EM +R ++ +T TY  +I G 
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+   + A  +  +++  G+ P+  T+N ++ G C  G++ KA+     +   + +PDI
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILK 389
            T NI++ G+C+ G  +    +F +  LK
Sbjct: 499 YTYNIMIEGMCKAGKWKMGGIYFVASALK 527



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 239/487 (49%), Gaps = 17/487 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y  +L       +L++   L   M +    P+   ++ L+S   K+      +   + M 
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                 +++TYN+LIN +C    L  A  L  +M  L   PD+VT N+L+N F    R  
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L+D++ E G KP+ VT   +I       K  +A  ++  M + G  PD VTY  ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           +  CK G+ + A  +++ M    ++ N +  +T++ +LC  +  D+A  L      +G  
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + ++Y +LI+      + + A +L  +M ER+I P+  T++A+I    + GK  +A  +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
             E+++  + P+  T++++I+GFC   ++ +A Q    M+ K   P++VT N L++G C+
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
              ++K ++ FR    +G   ++VTY TLI    + R  ++A  +  +M    + P+  T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +   L ++G+L +A            +  + +Q +T      ++P   +Y+  I   
Sbjct: 466 YNILLDGLCKNGKLAKAM-----------VVFEYLQRST------MEPDIYTYNIMIEGM 508

Query: 493 CSQGRYK 499
           C  G++K
Sbjct: 509 CKAGKWK 515



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 175/368 (47%), Gaps = 17/368 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           ++D A  +   M ++   P  + ++ L+ A  K    +      + M   G+  N  T N
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            +++  C   +L  A  LL    K GY  D V+  +L+ G+    + + A+ L D+M E 
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P T T+  +I GL    K  +A+ +++ ++Q G  PD  T+  +++G C  G  + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           L   NKM     + ++V  + ++  LC+    + AL  F     KG   + +TY++LIS 
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
           LC   R  DA  LLS+M E+K+ P+  T++A+  A V+ G+L +A+K    M++      
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK------ 351

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        IDP+  +YS  IN  C   R  +A Q+ E   +K    N  TY  L+
Sbjct: 352 -----------RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

Query: 525 NGLIKRRK 532
           NG  K ++
Sbjct: 401 NGFCKAKR 408



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 148/309 (47%), Gaps = 17/309 (5%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +L T   + +LD+A  L    ++   +   + +  L++   +  K +  +   ++M+   
Sbjct: 49  VLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG 108

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I  + +TYN +I    +  +   A+ +L ++++ G  PD  T N++++GFC   ++  A+
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
              ++MVE  +KPD VT   L+ GL       +A+      + +G   D VTY  +++ L
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK    + A  LL++ME  K+  +   Y+ +  +L +    ++A    + M   G     
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG----- 283

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
            V+PN            I+YS  I+  C+ GR+ DA ++  +  ++ I  N  T+  L++
Sbjct: 284 -VRPNV-----------ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331

Query: 526 GLIKRRKSI 534
             +K+ K +
Sbjct: 332 AFVKKGKLV 340


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 220/427 (51%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            +P  V +  +L  + K  K + V  L   M+  G+  +  ++ IL+  +C+   L  A+ 
Sbjct: 601  IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 660

Query: 67   VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            ++  M +    P + T   L+NG+C     +EA  L   M+    +P+VV YNT+IN   
Sbjct: 661  LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 720

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            ++     A ++   +++ GI+ +AVT+N +I      G+   A +++R+M +    P+ +
Sbjct: 721  KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
             +  LID   K GN+ EA  +   M R+ +  N  T N++++  C    L +A  + +  
Sbjct: 781  FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840

Query: 247  SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              +G + D V+Y TLITG+ + ++    +KL+ EM  + ++   FTYN +I G  Q+GK 
Sbjct: 841  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900

Query: 307  EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
              A  + N ++  G+ PD  T+N ++   C+ G++EKAL     + +     DI+T NI+
Sbjct: 901  NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 960

Query: 367  LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
            + GLCR   L++A   FRS   KG   D++ Y T+IS LC++    +A  L   M+E   
Sbjct: 961  IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1020

Query: 427  GPDRYTY 433
             P    Y
Sbjct: 1021 MPSERIY 1027



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 208/436 (47%)

Query: 25   KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYN 84
            K ++   L  +M +   +P+   +  +++   K+      + +   M       D++++ 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 85   MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
            +LI+ +C    L  A  L  +M  L   P +VT  +L+N F +  R  EA  L+D +D  
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 145  GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
            G  PN V +N +I   CK   ++ A ++   ME+ G   D VTYNTLI     +G   +A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 205  FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             R++  M ++ +  N I    ++ T   E  L EA  L     +R    +  +Y +LI G
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 265  YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            +        A  ++D M  +   P   TYN +I G  +S + E  + +  E+   G++ D
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 325  ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              T+NT+IHG+C  G++  A +  N+MV+    PDIVT NILL  LC  G +EKAL    
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 385  SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                    VD +TYN +I  LC+  +L++A+ L   +  K + PD   Y  + + L   G
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 445  RLEEAQKFTSIMVETG 460
               EA K    M E G
Sbjct: 1004 LQREADKLCRRMKEDG 1019



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 201/384 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +G   D  ++  ++    +  +L+    +L  M K G  P+  T+  L+ G+C +  
Sbjct: 97  MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  +V LM ++   P+V  YN LI+G C  G L  A  L  EME   L  DVVTYNT
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+     SGR  +A +++ ++ +  I P+ VT   +I  + K+G +D+A ++ + M ++ 
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYN++I+  C  G + +A +  D+M  KG   N +T NT++   C  + +DE  
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    S  G+  D  +Y TLI GY +  K   AL ++  M  R++ P   T+  ++ GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +G+ E A+   +++ +S        +N +IHG C   +VEKA +   ++  +  KPD 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
            T  I++ GLC+ G   +A +  R
Sbjct: 457 RTYTIMILGLCKNGPRREADELIR 480



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 214/420 (50%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V +  +L A     +   V      M+  G+  +  ++ IL+  +C+   L  A+ 
Sbjct: 68  LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+  M +    P + T+  L++G+C    + +AF L   M      P+VV YNTLI+   
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++G    A +L++E+++ G+  + VT+N ++   C  G+   A +++R+M +   +PD V
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+  LID   K GN++EA  +   M +  +  N +T N+I++ LC   +L +A    +  
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           + +G + + V+Y TLI+G+ +    +  +KL+  M         FTYN +I G  Q GK 
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A+D+   ++   + PD  T   ++HG C  G++E AL   + M E      IV  NI+
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + GLC+   +EKA + F    ++G   D+ TY  +I  LCK     +A  L+  M+E+ +
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 191/384 (49%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D++++ +LI+ +C    L  A  +  +M  L   P +VT+ +L++ F    R  +AF L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
             + + G +PN V +N +I   CK G+++ A +++  ME+ G   D VTYNTL+   C +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G   +A RM+  M ++ +  + +T   ++     +  LDEA  L     +     + V+Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            ++I G     +   A K +D M  +   P+  TYN +I G  +    ++ + +   +  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G   D  T+NT+IHG+C  G++  AL     MV +   PDI+T  ILL GLC  G +E 
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           AL  F       K +  V YN +I  LCK  ++E A+ L   +  + + PD  TY  +  
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 439 ALVESGRLEEAQKFTSIMVETGKI 462
            L ++G   EA +    M E G I
Sbjct: 465 GLCKNGPRREADELIRRMKEEGII 488



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 198/384 (51%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G   D  ++  ++    +  +L+    LL  M K G  P+  T   L++G+C+   
Sbjct: 630  MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 689

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +EA+ +VD M     +P+V  YN +ING C    L  A  +   ME   +  D VTYNT
Sbjct: 690  FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI+    SGR  +A +L+ ++ +  I PN +    +I  + KEG + +A  + + M    
Sbjct: 750  LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 809

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              P+  TYN+LI+  C  G + +A  M D+M  KG   + +T NT++   C  K++++  
Sbjct: 810  VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L    + +G   D  +Y TLI GY +  K N A K+++ M +  + P   TYN ++  L
Sbjct: 870  KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 929

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              +GK E+A+ M+ +L +S M  D  T+N II G C   ++++A      +  K  KPD 
Sbjct: 930  CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 989

Query: 361  VTCNILLSGLCREGILEKALKFFR 384
            +    ++SGLCR+G+  +A K  R
Sbjct: 990  IAYITMISGLCRKGLQREADKLCR 1013



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/294 (38%), Positives = 161/294 (54%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G   D VTYNT++  L   G+  +   LL DM K+ + PN   +  L+  + K G 
Sbjct: 735  MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 794

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L EA  +   M +   +P+V+TYN LING+C  G L +A  +   M S    PDVVTYNT
Sbjct: 795  LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 854

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI  F +S R  +  KL  E+   G+  +A T+N +I  YC+ GK++ A K+   M + G
Sbjct: 855  LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             SPD VTYN L+D  C  G +E+A  M++ + +  + ++ IT N I+  LC   KL EA+
Sbjct: 915  VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 974

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
             L  S +++G   D ++Y T+I+G  R      A KL   MKE   MPS   Y+
Sbjct: 975  CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 218/446 (48%), Gaps = 18/446 (4%)

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L  G+ ++   E+AF L  EM   + LP +V +  L+       R         +++ +G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I  +  +  I+I  +C+  ++  A  ++  M + G+ P  VT+ +L+   C    + +AF
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++ +M + G + N +  NT++  LC   +L+ A  LLN   K+G   D V+Y TL+TG 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
               + + A ++  +M +R I P   T+ A+I    + G  ++A ++  E++QS + P+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N+II+G C  G++  A +  + M  K   P++VT N L+SG C+  ++++ +K F+ 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY----------AA 435
              +G   D  TYNTLI   C+  +L  A  +   M  +++ PD  T+            
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT--------PEEIDPSSISYSE 487
           I +ALV+   + E++K+  I+     I+         K          E + P + +Y+ 
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461

Query: 488 KINEHCSQGRYKDALQIFEETRQKGI 513
            I   C  G  ++A ++    +++GI
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGI 487



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 177/358 (49%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G  P  VT  ++L+   +  +  E   L+  M   G VPN   YN +++G CK   
Sbjct: 665  MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L  A+ V   M +     D  TYN LI+G  N+G   +A RL ++M   K+ P+V+ +  
Sbjct: 725  LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI+ F + G  +EA  L  E+    + PN  T+N +I  +C  G +  A  +   M   G
Sbjct: 785  LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD VTYNTLI   CK+  +E+  ++   M  +GL  +  T NT++H  C   KL+ A 
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             + N     G   D V+Y  L+     + K  +AL + +++++ ++     TYN +I GL
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
             ++ K ++A  +   L + G+ PD   + T+I G C +G   +A +   +M E  F P
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1022



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 217/444 (48%), Gaps = 19/444 (4%)

Query: 96   LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
             ++AF L  EM   + +P +V +  ++    +  +      L  +++  GI  +  +  I
Sbjct: 585  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644

Query: 156  MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
            +I  +C+  ++  A  ++  M + GF P  VT  +L++  C+    +EA  ++D M   G
Sbjct: 645  LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 216  LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
               N +  NT+++ LC  + L+ A  +     K+G   D V+Y TLI+G     +   A 
Sbjct: 705  FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 276  KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            +L  +M +R+I P+   + A+I    + G   +A ++  E+++  ++P+  T+N++I+GF
Sbjct: 765  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824

Query: 336  CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
            C  G +  A    + MV K   PD+VT N L++G C+   +E  +K F     +G   D+
Sbjct: 825  CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884

Query: 396  VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
             TYNTLI   C+  +L  A  + + M +  + PD  TY  +   L  +G++E+A     +
Sbjct: 885  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL----V 940

Query: 456  MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
            MVE  +               E+D   I+Y+  I   C   + K+A  +F    +KG+  
Sbjct: 941  MVEDLQ-------------KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 987

Query: 516  NKSTYMNLMNGLIKRRKSISKAVD 539
            +   Y+ +++GL   RK + +  D
Sbjct: 988  DAIAYITMISGLC--RKGLQREAD 1009



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 170/315 (53%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V YNT++D L K G+LN   +LL++M+K+GL  +  TYN L++G C  G   +A R+
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +    PDV T+  LI+ +   G L+EA  L KEM    + P+ VTYN++IN    
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR  +A K  D +   G  PN VT+N +I  +CK   +D+  K+ + M   GF+ D  T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI   C+ G +  A  +   M  + +  + IT   +LH LC   +++ A +  +   
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +   Y+  V+Y  +I G  + +K  +A +L+  +    + P   TY  MI GL ++G   
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473

Query: 308 QAIDMLNELLQSGMI 322
           +A +++  + + G+I
Sbjct: 474 EADELIRRMKEEGII 488



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 170/329 (51%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+GFG +P+ V YNT+++ L K   LN   ++   M+K+G+  +  TYN L+SG    G 
Sbjct: 700  MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 759

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              +A R++  M + K  P+V  +  LI+ +   G L EA  L KEM    ++P+V TYN+
Sbjct: 760  WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LIN F   G   +A  + D +   G  P+ VT+N +I  +CK  +++   K+   M   G
Sbjct: 820  LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
               D  TYNTLI   C+AG +  A ++ + M   G+  + +T N +L  LC   K+++A 
Sbjct: 880  LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +++    K    +D ++Y  +I G  R +K   A  L+  +  + + P    Y  MI GL
Sbjct: 940  VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999

Query: 301  SQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             + G   +A  +   + + G +P E  ++
Sbjct: 1000 CRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 173/354 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P  VT+ ++L       ++ +   L+  M K G  PN   YN L+ G CK G 
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ +++ M +     DV TYN L+ G C +G   +A R+ ++M    + PDVVT+  
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   EA +L  E+ +  + PN VT+N +I   C  G++  A K    M   G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYNTLI   CK   ++E  ++   M  +G   +  T NT++H  C   KL  A 
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      R    D +++  L+ G   + +   AL  +D+M+E +       YN MI GL
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ K E+A ++   L   G+ PD  T+  +I G C  G   +A +   +M E+
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 141/575 (24%), Positives = 227/575 (39%), Gaps = 70/575 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D VTYNT+L  L   G+ ++   +L DM K+ + P+  T+  L+  + K G 
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA  +   M Q+   P+  TYN +ING C  G L +A +    M S    P+VVTYNT
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F +     E  KL   +   G   +  T+N +I  YC+ GK+  A  I   M    
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD +T+  L+   C  G +E A    D M      +  +  N ++H LC   K+++A+
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L       G   D  +Y  +I G  ++     A +L   MKE  I+      NA    L
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM---NAEDDHL 498

Query: 301 SQSGKTEQAIDM----------LNELLQSGMIPDETTFNTIIHGFCSEG----------- 339
            +   + + I +           N      +IP    F++ + GF               
Sbjct: 499 EEHSSSNKEISLSLREIWERSKSNPFWMQRLIP--IAFSSSVKGFVRRHYLLLERGNNPE 556

Query: 340 ---------------------------QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
                                      + + A     +M++    P IV    +L+ + +
Sbjct: 557 TSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAK 616

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
               +  +  +      G + D  ++  LI   C+  RL  A  LL +M +    P   T
Sbjct: 617 MNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVT 676

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
             ++     +  R +EA      M   G +                 P+ + Y+  IN  
Sbjct: 677 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFV-----------------PNVVIYNTVINGL 719

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           C      +AL++F    +KGI  +  TY  L++GL
Sbjct: 720 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 754



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 18/386 (4%)

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K D A  +   M ++   P  V +  ++    K    +    +   M   G+  +  +  
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++H  C   +L  A  LL    K G+    V+ G+L+ G+ +  +   A+ L D M   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
             +P+   YN +I GL ++     A+++   + + G+  D  T+NT+I G  + G+   A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +    MV++   P+++    L+    +EG L +A   ++  I +    +  TYN+LI+ 
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN- 463
            C    L DA  +   M  K   PD  TY  + T   +S R+E+  K    M   G +  
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 464 --------HQVVQPNTSKTPEE---------IDPSSISYSEKINEHCSQGRYKDALQIFE 506
                   H   Q       ++         + P  ++Y+  ++  C+ G+ + AL + E
Sbjct: 884 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRK 532
           + ++  + ++  TY  ++ GL +  K
Sbjct: 944 DLQKSEMDVDIITYNIIIQGLCRTDK 969



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 64/124 (51%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD VTYN +LD L   GK+ +   ++ D++K  +  +  TYNI++ G C+   LKEA
Sbjct: 914  GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 973

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
              +   +T+    PD   Y  +I+G C  G+  EA +L + M+    +P    Y+  +  
Sbjct: 974  WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 1033

Query: 125  FFES 128
             + S
Sbjct: 1034 HYTS 1037


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 249/533 (46%), Gaps = 23/533 (4%)

Query: 4   FGCLPDNV-TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            GC    V  YN +LDAL ++  +  V  +  +M+K G+ PN  TYN+L+   C+   + 
Sbjct: 120 LGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVG 179

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A R++D M +    PD  ++  +I+  C    L+EA  +  EM      P   +YN ++
Sbjct: 180 AARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGASYNAVV 234

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +      R  E F ++DE+   G++P+ V +  ++  +CK  ++  AC I+  M   G  
Sbjct: 235 HALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCV 294

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+  T+  L+      G + +A  M + M  +G   +TI+ N ++  LC    L  A  +
Sbjct: 295 PNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFV 354

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +   K     D  +Y TLI G+ +    + A+ +W++M      P+   Y  M+  L +
Sbjct: 355 FSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCK 414

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
               +QA ++++++      P+  TFNT+I   C  G+  +AL   + M      P+  T
Sbjct: 415 KVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRT 474

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N LL GL REG  E AL+     +  G  +  V+YNT IS LC+ R +++A  LL  M 
Sbjct: 475 YNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMI 534

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            + + PD +T+ AI  A  + G +  A      M             +    P  I    
Sbjct: 535 IQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRM-------------DAVNCPRNI---- 577

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           ++Y+  ++  CSQ +  DA+    +   +GI  N++T+  L+ G+     +I 
Sbjct: 578 VAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIG 630



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 240/537 (44%), Gaps = 33/537 (6%)

Query: 20  LFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK---- 75
           L   G L+ V+  L +M+ +G+         LV+  C       A R +    + +    
Sbjct: 65  LAAAGDLDGVQYTLQEMRLRGVA---CPEGALVAAICAFARAGAADRALKTFYRARHDLG 121

Query: 76  -SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
            + P V  YN L++      ++     +   M    + P+V TYN LI    ++ R   A
Sbjct: 122 CAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAA 181

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            +++DE+   G +P+ V+H  +I   CK  ++D+A  I+  M   G S     YN ++ A
Sbjct: 182 RRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVHA 236

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C    M E F ++D M  +GL+ +T+   +I+   C  ++L  A  +L      G   +
Sbjct: 237 LCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPN 296

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             ++  L+ G+F D K + AL +W+ M      PST +YN +I GL   G  ++A+ + +
Sbjct: 297 VQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFS 356

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            + +S  +PD  T++T+I GF   G ++ A+   N M     KP++V    ++  LC++ 
Sbjct: 357 CMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKV 416

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
           + ++A        L+    +++T+NTLI SLC   R   A  +   M      P+  TY 
Sbjct: 417 MFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYN 476

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP------------------- 475
            +   L   G  E+A +  + M+  G     +V  NT+ +                    
Sbjct: 477 ELLHGLFREGNCEDALRMLTEMLNHG-FELSLVSYNTTISGLCQMRMIKEAMILLGRMII 535

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           + I P + +++  I+ +C +G  + A  +           N   Y +LM+GL  + K
Sbjct: 536 QGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHK 592



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ V Y  ++D L KK   ++  +L+  M  +   PN  T+N L+   C LG 
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+ V   M +    P+  TYN L++G    G  E+A R+  EM +      +V+YNT
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            I+   +     EA  L+  +   GI+P+A T N +I  YCKEG +  A  ++  M+   
Sbjct: 513 TISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVN 572

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
              + V Y +L+   C    +++A   +  M  +G+  N  T N ++
Sbjct: 573 CPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLV 619



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 85/158 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC P++ TYN +L  LF++G   +   +L++M   G   +  +YN  +SG C++  
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRM 522

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KEAM ++  M      PD +T+N +I+ +C  G +  A  +   M+++    ++V Y +
Sbjct: 523 IKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTS 582

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           L++      +  +A   + ++   GI PN  T N++++
Sbjct: 583 LMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVR 620



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 29/262 (11%)

Query: 278 WDEMKERQIMPSTF-----TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           W + + R   P+        + A +  L+ +G  +     L E+   G+   E      I
Sbjct: 38  WPQERSRSPAPNAGEALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAI 97

Query: 333 HGFCSEGQVEKALQ--FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
             F   G  ++AL+  +  +       P +   N LL  L RE ++   +  + +    G
Sbjct: 98  CAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAG 157

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              +  TYN LI +LC+  R+  A  +L EM  K   PD  ++  I +AL +  RL+EA+
Sbjct: 158 VEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEAR 217

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
              +                      E+ P   SY+  ++  C Q R ++   + +E   
Sbjct: 218 GILA----------------------EMTPVGASYNAVVHALCGQFRMREVFLVVDEMVH 255

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
           +G+  +   Y +++    K R+
Sbjct: 256 RGLRPDTVAYTSIVGAFCKARE 277



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V+YNT +  L +   + E   LL  M  QG+ P+  T+N ++  YCK G ++ A  ++  
Sbjct: 508 VSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGR 567

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M       ++  Y  L++G C+   L++A     +M    + P+  T+N L+   F    
Sbjct: 568 MDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLG 627

Query: 131 SMEAFKLIDELDE 143
           ++    LID + E
Sbjct: 628 TIGPMHLIDHIIE 640


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 238/465 (51%), Gaps = 20/465 (4%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTY--------------- 48
           FG + +   +  +L  L      N++R LL    K     N T +               
Sbjct: 101 FGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSI 160

Query: 49  --NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
             ++LV  Y K G +  A+   D            + N ++      G +     + KEM
Sbjct: 161 IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEM 220

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
              ++  +VVT++ +IN   + G+  +A  +++++   G  P+ +T+N +I  YCK GK+
Sbjct: 221 IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            KA  +++ M      P+ +T+N LID  C+  N+  A ++ + M R+GL+ N +T N++
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           ++ LC   KLDEA  L +  S  G   + V+Y  LI G+ + +    A ++ D++ +R +
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P+  T+N +I    ++G+ + A  + + +L +G+ P+ +T+N +I GFC EG V++A +
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL---KGKAVDSVTYNTLIS 403
              +M     K D+VT NIL+  LC++G   KA++      L   KG+  + VTYN LI 
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIK 520

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
             C + +LE+A  LL+EM EK L P+R TY  +   ++E G + +
Sbjct: 521 GFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 217/394 (55%), Gaps = 17/394 (4%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N +L +L K+G++  V  +  +M ++ +  N  T++++++G CK+G  ++A  VV+ M  
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               P V TYN +I+G+C AG + +A  L KEM + ++ P+ +T+N LI+ F        
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A K+ +E+   G++PN VT+N +I   C  GK+D+A  +   M   G  P+ VTYN LI+
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK   ++EA  M+D +G++GL  N IT NT++       ++D+A++L +     G   
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           +  +Y  LI G+ R+     A KL  EM+   +     TYN ++  L + G+T +A+ +L
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 314 NELL---QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           +E+    + G   +  T+N +I GFC++G++E+A +  N+M+EK   P+  T +IL    
Sbjct: 498 DEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL---- 553

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            R+ ++EK              +D   YN  ISS
Sbjct: 554 -RDEMMEKGFI---------PDIDGHLYNVSISS 577



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 219/418 (52%), Gaps = 4/418 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +GC  +++  + ++ A  K G+++   +        G   +  + N ++    K G +  
Sbjct: 154 WGC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              V   M + +   +V T++++ING C  G  ++A  + ++M++    P V+TYNT+I+
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + ++G+  +A  L+ E+    I PN +T NI+I  +C++  +  A K+   M+  G  P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTYN+LI+  C  G ++EA  + D M   GLK N +T N +++  C +K L EA  +L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +   KRG   + +++ TLI  Y +  + + A  L   M +  + P+  TYN +I G  + 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV---EKSFKPDI 360
           G  ++A  +  E+  +G+  D  T+N ++   C +G+  KA++  ++M    +K  + +I
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANI 512

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           VT N+L+ G C +G LE+A +     + KG   +  TY+ L   + ++  + D  G L
Sbjct: 513 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 570



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 181/327 (55%), Gaps = 19/327 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ +G  P  +TYNTI+D   K GK+ +   LL +M  + + PN  T+NIL+ G+C+   
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A +V + M +    P+V TYN LING C+ G L+EA  L+ +M  + L P+VVTYN 
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F +     EA +++D++ + G+ PN +T N +I  Y K G++D A  +   M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN LI   C+ GN++EA ++   M   GLK + +T N ++  LC + +  +A 
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 241 MLLNSAS---KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            LL+  +   K+G   + V+Y  LI G+    K   A +L +EM E+ ++P+  TY+   
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI-- 552

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPD 324
                         + +E+++ G IPD
Sbjct: 553 --------------LRDEMMEKGFIPD 565



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 197/394 (50%), Gaps = 23/394 (5%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N++  ++++  Y K G++D A +      + GF    ++ N ++ +  K G +     + 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M R+ + +N +T + +++ LC   K  +A  ++      G+    ++Y T+I GY + 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            K  +A  L  EM  ++I P+  T+N +I G  +      A  +  E+ + G+ P+  T+
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N++I+G CS G++++AL   +KM     KP++VT N L++G C++ +L++A +       
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           +G A + +T+NTLI +  K  R++DAF L S M +  + P+  TY  +       G ++E
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 449 AQKFTSIMVETGKINHQVVQPN-----------TSKTPEEIDPSS-----------ISYS 486
           A+K    M E   +   +V  N           T K    +D  +           ++Y+
Sbjct: 458 ARKLAKEM-EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYN 516

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             I   C++G+ ++A ++  E  +KG+  N++TY
Sbjct: 517 VLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 136/309 (44%), Gaps = 41/309 (13%)

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +LH L   K  ++   LL+S +K  +Y +   + +L             L  W       
Sbjct: 113 LLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL-----------SVLGSWG------ 155

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
              ++   + ++W   ++G+ + A++  +     G      + N ++     EG++    
Sbjct: 156 -CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVE 214

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA---LKFFRSWILKGKAVDSVTYNTLI 402
             + +M+ +    ++VT +++++GLC+ G  +KA   ++  ++W   G +   +TYNT+I
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW---GFSPSVITYNTII 271

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
              CK  ++  A  LL EM  K++ P+  T+  +         +  A+K    M   G  
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG-- 329

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
               +QPN            ++Y+  IN  CS G+  +AL + ++    G+  N  TY  
Sbjct: 330 ----LQPNV-----------VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 523 LMNGLIKRR 531
           L+NG  K++
Sbjct: 375 LINGFCKKK 383



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 17/202 (8%)

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++  +   G+++ AL+  ++  +  F+   ++CN +L  L +EG +      ++  I + 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
             V+ VT++ +I+ LCK  + + A  ++ +M+     P   TY  I     ++G++ +A 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                MV                  + I P+ I+++  I+  C       A ++FEE ++
Sbjct: 285 ALLKEMVA-----------------KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327

Query: 511 KGIAINKSTYMNLMNGLIKRRK 532
           +G+  N  TY +L+NGL    K
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGK 349


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 260/534 (48%), Gaps = 32/534 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP  +  N+I+  L K  ++++   ++  M   G+ P+  TY++++ G CK   + +A
Sbjct: 78  GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 137

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV++ M +  + P+  TYN LI+G+  +GM  E+ R+ K+M S  ++P V   N+ I+ 
Sbjct: 138 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 197

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN----MEENG 180
            F+ GR+ EA  + D +   G KP+ ++++ M+  Y      D     V N    M   G
Sbjct: 198 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSCLADVHNIFNLMLTKG 255

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+   +N LI+A  + G M++A  + + M  KG+  +T+T  T++ +LC   +LD+A 
Sbjct: 256 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 315

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY-NAMIWG 299
              N     G    E  YG LI G     +  +A +L  EM  + I P    Y +++I  
Sbjct: 316 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 375

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+  +  D+++ ++Q+G  P+  TFN+++ G+C  G +E+A    + M     +P+
Sbjct: 376 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 435

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
                 L+ G C+ G ++ AL  FR  + KG    SV Y+ ++  L + RR   A  +  
Sbjct: 436 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 495

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTP 475
           EM E       +TY  +   L  +   +EA    +K  ++ V+   I   +V        
Sbjct: 496 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV-------- 547

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  IS   K+      GR ++A ++F+     G+  N  TY  ++  LIK
Sbjct: 548 -------ISAMFKV------GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 588



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-- 58
           M   G +P     N+ + ALFK G+ NE + +   M  +G  P+  +Y+ ++ GY     
Sbjct: 179 MSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD 238

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             L +   + +LM      P+   +N+LIN +   GM+++A  + ++M++  ++PD VT+
Sbjct: 239 SCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 298

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            T+I+     GR  +A    + + + G+ P+   +  +I+  C  G++ KA +++  M  
Sbjct: 299 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 358

Query: 179 NGFSPDCVTY-NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
               P  V Y +++I+  CK G + E   +MD+M + G + N +T N+++   C    ++
Sbjct: 359 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 418

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA+ LL++ +  G   +   YGTL+ GY ++ + + AL ++ +M  + + P++  Y+ ++
Sbjct: 419 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 478

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL Q+ +T  A  M +E+++SG      T+  ++ G C     ++A     K+   + K
Sbjct: 479 HGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 538

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            DI+T NI++S + + G  ++A + F +    G   +  TY+ +I++L KE   E+A  L
Sbjct: 539 FDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 598

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
              +E+     D      I   L+    + +A  + SI+ E
Sbjct: 599 FISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 639



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 233/496 (46%), Gaps = 21/496 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P   TYNIL+  Y ++      + +V  + +N   PD ++Y+ LI G+   G +++A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             EM    +LP ++  N++I    +     +A  ++ ++ + GI P+  T++++I   CK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
              +DKA +++  M E G  P+ +TYN+LI     +G   E+ R+   M   G+      
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR--DEKANRALKLWDE 280
            N+ +H L    + +EA  + +S   +G   D +SY T++ GY    D        +++ 
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  + I P+   +N +I   ++ G  ++A+ +  ++   GMIPD  TF T+I   C  G+
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY-N 399
           ++ AL   N MV+    P       L+ G C  G L KA +     + K      V Y +
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           ++I++LCKE R+ +   ++  M +    P+  T+ ++       G +EEA      M   
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 I+P+   Y   ++ +C  GR  DAL +F +   KG+      
Sbjct: 431 G-----------------IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 520 YMNLMNGLIKRRKSIS 535
           Y  +++GL + R++ +
Sbjct: 474 YSIILHGLFQARRTTA 489



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 215/448 (47%), Gaps = 3/448 (0%)

Query: 8   PDNVTYNTILD--ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           PD ++Y+T+L   A      L +V ++ + M  +G+ PN+  +NIL++ Y + G + +AM
Sbjct: 221 PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAM 280

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + + M     +PD  T+  +I+  C  G L++A      M  + + P    Y  LI   
Sbjct: 281 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 340

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              G  ++A +LI E+    I P  V + + +I   CKEG++ +   I+  M + G  P+
Sbjct: 341 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPN 400

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+N+L++  C  GNMEEAF ++D M   G++ N     T++   C   ++D+A  +  
Sbjct: 401 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 460

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G     V Y  ++ G F+  +   A K++ EM E     S  TY  ++ GL ++ 
Sbjct: 461 DMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 520

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            T++A  +L +L    +  D  TFN +I      G+ ++A +  + +      P+I T +
Sbjct: 521 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 580

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++++ L +E   E+A   F S    G A DS   N ++  L  +  +  A   LS + E 
Sbjct: 581 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 640

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKF 452
            L  +  T + + +     G+  E  K 
Sbjct: 641 NLTLEASTISLLASLFSREGKYREHIKL 668



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 1/386 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD VT+ T++ +L + G+L++     + M   G+ P+   Y  L+ G C  G 
Sbjct: 286 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 345

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  ++ ++M ++   P V  ++ +IN  C  G + E   +   M      P+VVT+N
Sbjct: 346 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 405

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +L+  +   G   EAF L+D +   GI+PN   +  ++  YCK G+ID A  + R+M   
Sbjct: 406 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 465

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  V Y+ ++    +A     A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 466 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 525

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL          D +++  +I+  F+  +   A +L+D +    ++P+  TY+ MI  
Sbjct: 526 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 585

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +    E+A ++   + +SG   D    N I+    ++ +V KA  + + + E +   +
Sbjct: 586 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLE 645

Query: 360 IVTCNILLSGLCREGILEKALKFFRS 385
             T ++L S   REG   + +K   +
Sbjct: 646 ASTISLLASLFSREGKYREHIKLLPA 671



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 21/263 (7%)

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R   P+  TYN +I    +  + +  + ++  LL++G+ PD+ ++ ++I+GF  +G+V+K
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDK 66

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A     +M+E+   P I+ CN ++  LC+   ++KA    +  +  G A D  TY+ +I 
Sbjct: 67  AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            LCK + ++ A  +L +M E    P+  TY ++      SG   E+ +    M   G I 
Sbjct: 127 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 186

Query: 464 ---------HQVVQPNTSKTPEEI---------DPSSISYSEKINEH--CSQGRYKDALQ 503
                    H + +   +   + I          P  ISYS  ++ +   +     D   
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 246

Query: 504 IFEETRQKGIAINKSTYMNLMNG 526
           IF     KGIA NK  +  L+N 
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINA 269


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 260/534 (48%), Gaps = 32/534 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP  +  N+I+  L K  ++++   ++  M   G+ P+  TY++++ G CK   + +A
Sbjct: 164 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 223

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV++ M +  + P+  TYN LI+G+  +GM  E+ R+ K+M S  ++P V   N+ I+ 
Sbjct: 224 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 283

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN----MEENG 180
            F+ GR+ EA  + D +   G KP+ ++++ M+  Y      D     V N    M   G
Sbjct: 284 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT--ATDSCLADVHNIFNLMLTKG 341

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+   +N LI+A  + G M++A  + + M  KG+  +T+T  T++ +LC   +LD+A 
Sbjct: 342 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 401

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY-NAMIWG 299
              N     G    E  YG LI G     +  +A +L  EM  + I P    Y +++I  
Sbjct: 402 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 461

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+  +  D+++ ++Q+G  P+  TFN+++ G+C  G +E+A    + M     +P+
Sbjct: 462 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 521

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
                 L+ G C+ G ++ AL  FR  + KG    SV Y+ ++  L + RR   A  +  
Sbjct: 522 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 581

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNTSKTP 475
           EM E       +TY  +   L  +   +EA    +K  ++ V+   I   +V        
Sbjct: 582 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV-------- 633

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                  IS   K+      GR ++A ++F+     G+  N  TY  ++  LIK
Sbjct: 634 -------ISAMFKV------GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 674



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-- 58
           M   G +P     N+ + ALFK G+ NE + +   M  +G  P+  +Y+ ++ GY     
Sbjct: 265 MSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD 324

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
             L +   + +LM      P+   +N+LIN +   GM+++A  + ++M++  ++PD VT+
Sbjct: 325 SCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 384

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            T+I+     GR  +A    + + + G+ P+   +  +I+  C  G++ KA +++  M  
Sbjct: 385 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 444

Query: 179 NGFSPDCVTY-NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
               P  V Y +++I+  CK G + E   +MD+M + G + N +T N+++   C    ++
Sbjct: 445 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 504

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA+ LL++ +  G   +   YGTL+ GY ++ + + AL ++ +M  + + P++  Y+ ++
Sbjct: 505 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 564

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL Q+ +T  A  M +E+++SG      T+  ++ G C     ++A     K+   + K
Sbjct: 565 HGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 624

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
            DI+T NI++S + + G  ++A + F +    G   +  TY+ +I++L KE   E+A  L
Sbjct: 625 FDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 684

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
              +E+     D      I   L+    + +A  + SI+ E
Sbjct: 685 FISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 725



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 233/496 (46%), Gaps = 21/496 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P   TYNIL+  Y ++      + +V  + +N   PD ++Y+ LI G+   G +++A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             EM    +LP ++  N++I    +     +A  ++ ++ + GI P+  T++++I   CK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
              +DKA +++  M E G  P+ +TYN+LI     +G   E+ R+   M   G+      
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR--DEKANRALKLWDE 280
            N+ +H L    + +EA  + +S   +G   D +SY T++ GY    D        +++ 
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  + I P+   +N +I   ++ G  ++A+ +  ++   GMIPD  TF T+I   C  G+
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY-N 399
           ++ AL   N MV+    P       L+ G C  G L KA +     + K      V Y +
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           ++I++LCKE R+ +   ++  M +    P+  T+ ++       G +EEA      M   
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                 I+P+   Y   ++ +C  GR  DAL +F +   KG+      
Sbjct: 517 G-----------------IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559

Query: 520 YMNLMNGLIKRRKSIS 535
           Y  +++GL + R++ +
Sbjct: 560 YSIILHGLFQARRTTA 575



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 215/446 (48%), Gaps = 3/446 (0%)

Query: 5   GCLPDNVTYNTILD--ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G  PD ++Y+T+L   A      L +V ++ + M  +G+ PN+  +NIL++ Y + G + 
Sbjct: 304 GPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 363

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +AM + + M     +PD  T+  +I+  C  G L++A      M  + + P    Y  LI
Sbjct: 364 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 423

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTH-NIMIKWYCKEGKIDKACKIVRNMEENGF 181
                 G  ++A +LI E+    I P  V + + +I   CKEG++ +   I+  M + G 
Sbjct: 424 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ 483

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VT+N+L++  C  GNMEEAF ++D M   G++ N     T++   C   ++D+A  
Sbjct: 484 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 543

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +      +G     V Y  ++ G F+  +   A K++ EM E     S  TY  ++ GL 
Sbjct: 544 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 603

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++  T++A  +L +L    +  D  TFN +I      G+ ++A +  + +      P+I 
Sbjct: 604 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 663

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T +++++ L +E   E+A   F S    G A DS   N ++  L  +  +  A   LS +
Sbjct: 664 TYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSII 723

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLE 447
            E  L  +  T + + +     G ++
Sbjct: 724 GENNLTLEASTISLLASLFSREGMIK 749



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 184/378 (48%), Gaps = 1/378 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD VT+ T++ +L + G+L++     + M   G+ P+   Y  L+ G C  G 
Sbjct: 372 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 431

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  ++ ++M ++   P V  ++ +IN  C  G + E   +   M      P+VVT+N
Sbjct: 432 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 491

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +L+  +   G   EAF L+D +   GI+PN   +  ++  YCK G+ID A  + R+M   
Sbjct: 492 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 551

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  V Y+ ++    +A     A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 552 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 611

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL          D +++  +I+  F+  +   A +L+D +    ++P+  TY+ MI  
Sbjct: 612 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 671

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +    E+A ++   + +SG   D    N I+    ++ +V KA  + + + E +   +
Sbjct: 672 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLE 731

Query: 360 IVTCNILLSGLCREGILE 377
             T ++L S   REG+++
Sbjct: 732 ASTISLLASLFSREGMIK 749



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 27/266 (10%)

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           R   P+  TYN +I    +  + +  + ++  LL++G+ PD+ ++ ++I+GF  +G+V+K
Sbjct: 94  RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDK 152

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A     +M+E+   P I+ CN ++  LC+   ++KA    +  +  G A D  TY+ +I 
Sbjct: 153 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 212

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK------------ 451
            LCK + ++ A  +L +M E    P+  TY ++      SG   E+ +            
Sbjct: 213 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 272

Query: 452 -------FTSIMVETGKINHQ--VVQPNTSKTPEEIDPSSISYSEKINEHCSQGR--YKD 500
                  F   + + G+ N    +      K P+   P  ISYS  ++ + +       D
Sbjct: 273 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK---PDIISYSTMLHGYATATDSCLAD 329

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNG 526
              IF     KGIA NK  +  L+N 
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINA 355


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 215/440 (48%), Gaps = 3/440 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL--GWLKEAM 65
           P  V +N +L ++ K    + +  L   M   G+ PN  T +IL++ +C L  G + EA+
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            + D M      PDV TY  LING C  G    A RL   M      P+V  YNT+I+  
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +  +  EAF L  E+   GI P+  T+N +I   C   +      ++  M ++   PD 
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM-NTITLNTILHTLCCEKKLDEAYMLLN 244
           V++NT++DA CK G + EA  ++D M ++G  M N I+ NT+++  C  +++D+A  L  
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++    D V+Y TLI G    E+   A+ L+ EM     +P+  TY  ++  L ++ 
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 358

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A+ +L  +  S + PD    N  I G C  G++E A    + +  K  +PD+ T +
Sbjct: 359 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 418

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           I+++GLCR G+L++A K FR     G  ++   YNT+     +      A  LL EM  +
Sbjct: 419 IMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 478

Query: 425 KLGPDRYTYAAIHTALVESG 444
               D  T       L + G
Sbjct: 479 GFSADASTMTLFVKMLSDDG 498



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 205/429 (47%), Gaps = 21/429 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK--EGKIDKAC 170
           P  V +N L+    +         L  ++D  GI PN  T +I+I  +C    GKI +A 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            +   M   GF PD VTY TLI+  CK GN   A R++  M +K  + N    NTI+ +L
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C ++++ EA+ L +    +G   D  +Y +LI       +      L +EM + +IMP  
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQ-SGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
            ++N ++  L + GK  +A D++++++Q  G +P+  ++NT+I+G+C   +++KA+    
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M  +   PD VT + L+ GLC    L+ A+  F   +   +  + VTY  L+  LCK R
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 358

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            L +A  LL  +E   L PD          +  +G LE A+   S +   G         
Sbjct: 359 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG--------- 409

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + P   +YS  IN  C +G   +A ++F E  + G  +N   Y  +  G + 
Sbjct: 410 --------LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL- 460

Query: 530 RRKSISKAV 538
           R    S+A+
Sbjct: 461 RNNETSRAI 469



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 209/421 (49%), Gaps = 3/421 (0%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC--NAGMLEEAF 100
           P+   +N L++   K+      + +   M      P+++T ++LIN +C  N G + EA 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
            L  +M      PDVVTY TLIN   + G +  A +L+  + +   +PN   +N +I   
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK+ ++ +A  +   M   G SPD  TYN+LI A C     +    +++ M    +  + 
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWD 279
           ++ NT++  LC E K+ EA+ +++   +RG  +  V SY TLI GY + ++ ++A+ L+ 
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM  ++++P T TY+ +I GL    + + AI + +E++    IP+  T+  ++   C   
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 358

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
            + +A+     +   +  PDI   NI + G+CR G LE A   F +   KG   D  TY+
Sbjct: 359 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 418

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            +I+ LC+   L++A  L  EM+E     +   Y  I    + +     A +    MV  
Sbjct: 419 IMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 478

Query: 460 G 460
           G
Sbjct: 479 G 479



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 192/400 (48%), Gaps = 7/400 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  PD VTY T+++ L K G  +    LL  M ++   PN   YN ++   CK   
Sbjct: 124 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 183

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +   M      PD++TYN LI+  CN    +    L  EM   K++PDVV++NT
Sbjct: 184 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 243

Query: 121 LINRFFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +++   + G+  EA  ++D++ +  G  PN +++N +I  YCK  +IDKA  +   M   
Sbjct: 244 VVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 303

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              PD VTY+TLI   C    +++A  +   M       N +T   +L  LC  + L EA
Sbjct: 304 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 363

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL +        D       I G  R  +   A  L+  +  + + P  +TY+ MI G
Sbjct: 364 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 423

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G  ++A  +  E+ ++G   +   +NTI  GF    +  +A+Q   +MV + F  D
Sbjct: 424 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 483

Query: 360 IVTCNILLSGLCREGI---LEKALKFF---RSWILKGKAV 393
             T  + +  L  +G+   L++ L+ F   +SWI +   V
Sbjct: 484 ASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYENVMV 523



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 58/278 (20%)

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + AI   N +L+    P    FN ++            L   ++M      P+I T +IL
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 367 LSGLCR--EGILEKALKFFRSWILKGKAVDSVT--------------------------- 397
           ++  C    G + +AL  F   I +G   D VT                           
Sbjct: 103 INSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 162

Query: 398 --------YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
                   YNT+I SLCK+R++ +AF L SEM  K + PD +TY ++  AL      +  
Sbjct: 163 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 222

Query: 450 QKFTSIMVETGKINHQVVQPNT--------SKTPEEID------------PSSISYSEKI 489
               + MV++ KI   VV  NT         K  E  D            P+ ISY+  I
Sbjct: 223 ATLLNEMVDS-KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           N +C   R   A+ +F E  ++ +  +  TY  L++GL
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 319


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 157/588 (26%), Positives = 279/588 (47%), Gaps = 71/588 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLS-------DMKKQGLVPNRTTYNILVS 53
           M G GC P  V YN  + ++    +L    DLL+       +M     V N+        
Sbjct: 370 MAGCGCPPGYVVYNIFIGSICSGEELPS-PDLLALAEKVYEEMLASSCVLNKVNTANFAR 428

Query: 54  GYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
             C +G   +A +++ LM +   +PD  TY+ +I   C A  +E+AF L +EM+S+ ++P
Sbjct: 429 CLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIP 488

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           DV TY  LI+ F + G   +A    DE++  G  P+ VT+  ++  Y K  ++ +A  I 
Sbjct: 489 DVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIF 548

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAF----RMMDVMGRKG------------LK 217
             M + G +P+ +TY+ L+D  CKAG  ++A     +M+      G            + 
Sbjct: 549 HRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIA 608

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N +T   ++  LC   K+ +A  LL+  S  G   + + Y  LI G+ +  K + A ++
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           +  M +   +P+  TY ++I  + +  + + AI +L+++L+S   P+  T+  +I G C 
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G+ +KAL+  + M ++   P++VT   L+ GL + G ++ +L+ F   I +G A + VT
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEE----------------------KKLG-------P 428
           Y  LI+  C    L++A  LLSEM++                        LG        
Sbjct: 789 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESH 848

Query: 429 DRYTYAAIHTALVES----GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              + A ++  L++S    GRLE+A +    M+E        V  + + T ++      +
Sbjct: 849 GMVSIAPVYGLLIDSFSKAGRLEKALELHKEMME--------VSSSLNITSKD------T 894

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           Y+  I   C   + + A +++ E  +KG+    S ++ L+ GLIK  K
Sbjct: 895 YTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNK 942



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 247/548 (45%), Gaps = 90/548 (16%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+ + V        L   GK ++   ++  M ++G VP+ +TY+ +++  C+   +++A 
Sbjct: 416 CVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAF 475

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +   M     +PDV+TY +LI+ +C  G++E+A     EMES+   P VVTY  L++ +
Sbjct: 476 LLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAY 535

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM--------- 176
            ++ +  +A  +   + + G  PN +T++ ++   CK G+  KAC++   M         
Sbjct: 536 LKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGS 595

Query: 177 -------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
                    +  +P+ VTY  LID  CKA  + +A  ++DVM   G + N I  + ++  
Sbjct: 596 DFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDG 655

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK------------------- 270
            C   KLD A  +    SK GY     +Y +LI   F+D +                   
Sbjct: 656 FCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715

Query: 271 ----------------ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
                             +ALKL   M++R   P+  TY ++I GL +SGK + ++ +  
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFT 775

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT--CNI------- 365
           +++  G  P+  T+  +I+  C+ G +++A    ++M ++++ P  V   C++       
Sbjct: 776 QMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM-KQTYWPKYVQGYCSVVQGFSKK 834

Query: 366 -------------------------LLSGLCREGILEKALKFFRSWILKGKAVDSV---T 397
                                    L+    + G LEKAL+  +  +    +++     T
Sbjct: 835 FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDT 894

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y +LI +LC   +LE AF L SE+  K + P+   +  +   L++  +  EA +    M 
Sbjct: 895 YTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMC 954

Query: 458 ETGKINHQ 465
           + G +N Q
Sbjct: 955 DEG-VNWQ 961



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 240/578 (41%), Gaps = 55/578 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P   TYN ++  L   G+++    +  +M + G   ++ T        CK G 
Sbjct: 198 LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGR 257

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ +++   ++  L  V    M I+G   A + +EA      M     +P+VVTY T
Sbjct: 258 WSDALVMIE--REDFKLDTVLCTQM-ISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 314

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F +  +     ++I  +   G  PN    N ++  YC       A K++  M   G
Sbjct: 315 LLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCG 374

Query: 181 FSPDCVTYNTLIDANCKAGNMEE------AFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             P  V YN  I + C    +        A ++ + M      +N +        LC   
Sbjct: 375 CPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 434

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K D+A+ ++    ++G+  D  +Y  +IT      K  +A  L+ EMK   ++P  +TY 
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I    + G  EQA    +E+   G  P   T+  ++H +    QV +A    ++MV+ 
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWI-----------LKGKAVDS-----VTY 398
              P+ +T + L+ GLC+ G  +KA + +   I            +G+  DS     VTY
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             LI  LCK  ++ DA  LL  M      P+   Y A+     + G+L+ AQ+    M +
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674

Query: 459 TGKINHQVVQPNTSKTPEEID------------------------PSSISYSEKINEHCS 494
            G +      P        ID                        P+ ++Y+  I+  C 
Sbjct: 675 CGYL------PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            G  + AL++     ++G   N  TY +L++GL K  K
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGK 766



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 206/406 (50%), Gaps = 23/406 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM----------------KKQGLVPNRTTY 48
           GC P+ +TY+ ++D L K G+  +  ++ + M                    + PN  TY
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             L+ G CK   + +A  ++D+M+ N   P+   Y+ LI+G+C  G L+ A  +   M  
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
              LP V TY +LI+  F+  R   A K++ ++ E    PN VT+  MI   C+ G+  K
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQK 734

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A K++  ME+ G +P+ VTY +LID   K+G ++ + ++   M  +G   N +T   +++
Sbjct: 735 ALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLIN 794

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             C    LDEA+ LL S  K+ Y+   V  Y +++ G+   +K   +L L +E++   ++
Sbjct: 795 HCCAAGLLDEAHSLL-SEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMV 851

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ---SGMIPDETTFNTIIHGFCSEGQVEKA 344
                Y  +I   S++G+ E+A+++  E+++   S  I  + T+ ++I   C   Q+EKA
Sbjct: 852 SIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKA 911

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
            + ++++  K   P++     L+ GL +     +AL+   S   +G
Sbjct: 912 FELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 210/490 (42%), Gaps = 10/490 (2%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N++V   C+ G   +A+  +  +      P   TYN L+     AG ++  FR++KEM  
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
           L    D  T         + GR  +A  +I+  D    K + V    MI    +    D+
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIERED---FKLDTVLCTQMISGLMEASLFDE 292

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A   +  M  N   P+ VTY TL+    K   +    R++ +M  +G   N    N+++H
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 229 TLCCEKKLDEAYMLLN----SASKRGYYLDEVSYGTLITGYFRDEKANRAL--KLWDEMK 282
           + C  +    AY LLN         GY +  +  G++ +G         AL  K+++EM 
Sbjct: 353 SYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEML 412

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
               + +          L   GK ++A  ++  +++ G +PD +T++ +I   C   +VE
Sbjct: 413 ASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVE 472

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           KA     +M      PD+ T  IL+   C+ G++E+A  +F      G +   VTY  L+
Sbjct: 473 KAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALL 532

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            +  K +++  A  +   M +    P+  TY+A+   L ++G  ++A +  + M+ T   
Sbjct: 533 HAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDN 592

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                      T + I P+ ++Y   I+  C   +  DA ++ +     G   N   Y  
Sbjct: 593 VGSDFYFEGEHT-DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDA 651

Query: 523 LMNGLIKRRK 532
           L++G  K  K
Sbjct: 652 LIDGFCKVGK 661



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 183/457 (40%), Gaps = 61/457 (13%)

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YN L        R+    +L+ E+ E   +      N++++  C+ G   KA + +  ++
Sbjct: 140 YNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLK 199

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G+ P   TYN L+     AG M+  FR+   M   G   +  T+      LC E +  
Sbjct: 200 DFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWS 259

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A +++    +  + LD V    +I+G       + A+     M+    +P+  TY  ++
Sbjct: 260 DALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 316

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  +  +      +++ ++  G  P+ + FN+++H +C+      A +  N+M      
Sbjct: 317 AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCP 376

Query: 358 PDIVTCNILLSG-----------------------------------------LCREGIL 376
           P  V  NI +                                           LC  G  
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 436

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           +KA +  +  + KG   D+ TY+ +I+ LC+  ++E AF L  EM+   + PD YTY  +
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
             +  + G +E+A+ +   M   G                   PS ++Y+  ++ +    
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVG-----------------CSPSVVTYTALLHAYLKTK 539

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +   A  IF      G A N  TY  L++GL K  +S
Sbjct: 540 QVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGES 576


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 219/418 (52%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  V ++ +L A+ K  K   V  L   ++  G+  +  ++  L+  +C+   L  A+ 
Sbjct: 76  LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M +    P + T+  L+NG+C+     EA  L  ++  L   P+VV YNT+I+   
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           E G+   A  ++  + + GI+P+ VT+N +I      G    + +I+ +M   G SPD +
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T++ LID   K G + EA +  + M ++ +  N +T N++++ LC    LDEA  +LN  
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
             +G++ + V+Y TLI GY + ++ +  +K+   M    +   TFTYN +  G  Q+GK 
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A  +L  ++  G+ PD  TFN ++ G C  G++ KAL     + +      I+T NI+
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           + GLC+   +E A   F S  LKG + D +TY T++  L ++R   +A  L  +M+++
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 203/384 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G   D  ++ T++D   +  +L+     L  M K G  P+  T+  LV+G+C +  
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EAM +VD +      P+V  YN +I+  C  G +  A  + K M+ + + PDVVTYN+
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNS 224

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI R F SG    + +++ ++   GI P+ +T + +I  Y KEG++ +A K    M +  
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ VTYN+LI+  C  G ++EA ++++V+  KG   N +T NT+++  C  K++D+  
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L   S+ G   D  +Y TL  GY +  K + A K+   M    + P  +T+N ++ GL
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              GK  +A+  L +L +S  +    T+N II G C   +VE A      +  K   PD+
Sbjct: 405 CDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           +T   ++ GL R+ +  +A + +R
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYR 488



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 208/421 (49%), Gaps = 26/421 (6%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A  L  ++ E    P+ V  + ++    K  K +    + R++E  G S D  ++ TLI
Sbjct: 62  DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  C+   +  A   +  M + G + + +T  ++++  C   +  EA  L++     GY 
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V Y T+I       + N AL +   MK+  I P   TYN++I  L  SG    +  +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L+++++ G+ PD  TF+ +I  +  EGQ+ +A + +N+M+++S  P+IVT N L++GLC 
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G+L++A K     + KG   ++VTYNTLI+  CK +R++D   +L  M    +  D +T
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361

Query: 433 YAAIHTALVESGRLEEAQKFTSIMV-------------------ETGKINHQVVQ---PN 470
           Y  ++    ++G+   A+K    MV                   + GKI   +V+     
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            SKT   I    I+Y+  I   C   + +DA  +F     KG++ +  TY+ +M GL ++
Sbjct: 422 KSKTVVGI----ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477

Query: 531 R 531
           R
Sbjct: 478 R 478



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 155/289 (53%), Gaps = 1/289 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTYN+++  LF  G       +LSDM + G+ P+  T++ L+  Y K G 
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA +  + M Q    P++ TYN LING C  G+L+EA ++   + S    P+ VTYNT
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + ++ R  +  K++  +   G+  +  T+N + + YC+ GK   A K++  M   G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+N L+D  C  G + +A   ++ + +    +  IT N I+  LC   K+++A+
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM-KERQIMP 288
            L  S + +G   D ++Y T++ G  R      A +L+ +M KE  +MP
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 265/572 (46%), Gaps = 60/572 (10%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           GF C       ++ L  L +    NE+ D+L +++ + +       + ++  Y + G+L 
Sbjct: 99  GFAC-------SSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLS 151

Query: 63  EAMRVVDLMTQ-NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +A+ + D + +   S+PDV   N L++    +  LE+A ++  EM       D  +   +
Sbjct: 152 KAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIM 211

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +      G+  E  KLI++    G  PN V +N +I  YCK G I+ A  + + ++  GF
Sbjct: 212 VKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGF 271

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK-----MNTI--------------- 221
            P   T+ T+I+  CK G+   + R+++ +  +GL+     +N I               
Sbjct: 272 MPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAE 331

Query: 222 ---------------TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
                          T N +++ LC E K + A  LL+ ASK+G  L  +SY  LI  Y 
Sbjct: 332 SIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYC 391

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           + ++ + A KL  ++ ER   P   TY  +I GL  SG  + A++M  +L+  G+ PD  
Sbjct: 392 KSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAA 451

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            +N ++ G C  G+   A    ++M+++S  PD      L+ G  R G  ++A K F   
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLS 511

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + KG  VD V +N +I   C+   L++A   ++ M E+ L PD++TY+ I    V+   +
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
             A K    M           + N  K      P+ ++Y+  IN  C QG +  A + F+
Sbjct: 572 ATAIKIFRDM-----------EKNKCK------PNVVTYTSLINGFCCQGDFSLAEETFK 614

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           E + + +  N  TY  L+    K   ++ KAV
Sbjct: 615 EMQSRDLVPNVVTYTTLIRSFAKESSTLEKAV 646



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 229/452 (50%), Gaps = 2/452 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E +  +PD +  N +L  + K  +L + R +  +M ++G   +  +  I+V G C  G 
Sbjct: 161 VELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGK 220

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++E  ++++       +P++  YN +I G+C  G +E A  + KE++    +P + T+ T
Sbjct: 221 VEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGT 280

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNA-VTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +IN F + G  + + +L++E+ E G++      +NI+   Y    K+D A + +R +  N
Sbjct: 281 MINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPA-ESIRWIVAN 339

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              PD  TYN LI+  CK G  E A  ++D   +KGL +  ++   ++   C  K+ D A
Sbjct: 340 DCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIA 399

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL   ++RG   D V+YG LI G       + A+ +  ++ +R + P    YN ++ G
Sbjct: 400 SKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+   A  + +E+L   ++PD   + T+I GF   G  ++A +     VEK  K D
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVD 519

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +V  N ++ G CR G+L++AL        +    D  TY+T+I    K++ +  A  +  
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
           +ME+ K  P+  TY ++       G    A++
Sbjct: 580 DMEKNKCKPNVVTYTSLINGFCCQGDFSLAEE 611



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 227/480 (47%), Gaps = 39/480 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+ DN +   ++  +  +GK+ E R L+ D   +G VPN   YN ++ GYCKLG ++ A
Sbjct: 201 GCV-DNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENA 259

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------------------ 106
             V   +     +P + T+  +ING+C  G    + RL +E+                  
Sbjct: 260 KLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDA 319

Query: 107 -----------ESLKLL------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
                      ES++ +      PD+ TYN LINR  + G+   A  L+DE  + G+   
Sbjct: 320 KYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILT 379

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            +++  +I+ YCK  + D A K++  + E G  PD VTY  LI     +G+M++A  M  
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            +  +G+  +    N ++  LC   +   A +L +    R    D   Y TLI G+ R  
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSG 499

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             + A K++    E+ +      +NAMI G  +SG  ++A+  +N + +  ++PD+ T++
Sbjct: 500 DFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           TII G+  +  +  A++    M +   KP++VT   L++G C +G    A + F+    +
Sbjct: 560 TIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSR 619

Query: 390 GKAVDSVTYNTLISSLCKERR-LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE--SGRL 446
               + VTY TLI S  KE   LE A      M   K  P+  T+  +    V+  SGR 
Sbjct: 620 DLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRF 679



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/584 (24%), Positives = 248/584 (42%), Gaps = 110/584 (18%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG--- 59
           G GC+P+ V YNTI+    K G +   + +  ++K +G +P   T+  +++G+CK G   
Sbjct: 233 GKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFV 292

Query: 60  ------------------WL---------KEAMRV-----VDLMTQNKSLPDVWTYNMLI 87
                             W          +   +V     +  +  N   PD+ TYN+LI
Sbjct: 293 ASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILI 352

Query: 88  NGWCN-------AGMLEEA------------------FRLRKEME-SLKLL--------- 112
           N  C        AG+L+EA                  +   KE + + KLL         
Sbjct: 353 NRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCK 412

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD+VTY  LI+    SG   +A  +  +L + G+ P+A  +N+++   CK G+   A  +
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              M +    PD   Y TLID   ++G+ +EA ++  +   KG+K++ +  N ++   C 
Sbjct: 473 FSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCR 532

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
              LDEA   +N  ++     D+ +Y T+I GY + +    A+K++ +M++ +  P+  T
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVT 592

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKM 351
           Y ++I G    G    A +   E+    ++P+  T+ T+I  F  E   +EKA+ +   M
Sbjct: 593 YTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELM 652

Query: 352 VEKSFKPDIVTCNILLSGLCRE--------------GILEKALKFFRSWILKGKAVDSVT 397
           +     P+ VT N LL G  ++              G      +FF      G +     
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAA 712

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR------------ 445
           YN+++  LC    ++ A  L   M +K   PD  ++AAI       G             
Sbjct: 713 YNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNL 772

Query: 446 ----LEEAQKFT---------SIMVETGKINHQVVQPNTSKTPE 476
               LE A +++         +++ E   I H +V+   +K PE
Sbjct: 773 DEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEKADTKEPE 816



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 177/446 (39%), Gaps = 85/446 (19%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +  N++Y  ++ A  K  + +    LL  + ++G  P+  TY IL+ G    G + +A
Sbjct: 375 GLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDA 434

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   +      PD   YNML++G C  G    A  L  EM    +LPD   Y TLI+ 
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDG 494

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SG   EA K+     E G+K + V HN MIK +C+ G +D+A   +  M E    PD
Sbjct: 495 FIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+T+ID   K  +M  A ++   M +   K N +T  ++++  CC+     A     
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFK 614

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKA-NRALKLWDEMKERQIMPSTFTYNAMIWG---- 299
               R    + V+Y TLI  + ++     +A+  W+ M   + +P+  T+N ++ G    
Sbjct: 615 EMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674

Query: 300 ---------------------------------------------LSQSGKTEQAIDMLN 314
                                                        L   G  + A  + +
Sbjct: 675 TSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQD 734

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEG----------------------QVEKALQFH---- 348
            +++ G  PD  +F  I+HGFC  G                      +  + L+ H    
Sbjct: 735 RMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKA 794

Query: 349 ---------NKMVEKSFKPDIVTCNI 365
                    + MVEK+   +   C I
Sbjct: 795 VICEASTILHAMVEKADTKEPEICRI 820



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 126/323 (39%), Gaps = 57/323 (17%)

Query: 267 RDEKANRALKLWDEM---KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           R +     +KL+D +   K+ +   + F  ++ +  L++     +  D+L  L    +  
Sbjct: 73  RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKL 132

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFKPDIVTCNILLS-------------- 368
                + ++H +   G + KA++ ++ +VE     PD++ CN LLS              
Sbjct: 133 THEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKV 192

Query: 369 ---------------------GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
                                G+C EG +E+  K       KG   + V YNT+I   CK
Sbjct: 193 YDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCK 252

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA------LVESGRLEEAQKFTSIMVETGK 461
              +E+A  +  E++ K   P   T+  +          V S RL E  K   + V    
Sbjct: 253 LGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWF 312

Query: 462 INHQV---------VQPNTS---KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           +N+ +         V P  S       +  P   +Y+  IN  C +G+ + A  + +E  
Sbjct: 313 LNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEAS 372

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
           +KG+ +   +Y  L+    K ++
Sbjct: 373 KKGLILTNLSYAPLIQAYCKSKE 395


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 250/547 (45%), Gaps = 60/547 (10%)

Query: 18  DALFK----KGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           DAL K     G  ++  D+L   K  G  P   + N L++   +   +  A+ +   +  
Sbjct: 153 DALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKA 212

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               P+ +TY + I G+C  G L EA  + ++ME   + P+  +Y T I      GRS  
Sbjct: 213 FGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDL 272

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
            FK++ ++    I  +   + ++I+ +C E K+ +A  I+R ME+ GF+PD   Y  LI 
Sbjct: 273 GFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALIS 332

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH------------------------- 228
             C  GN+ +A  + D M  KG+K N + L++IL                          
Sbjct: 333 GYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFF 392

Query: 229 ----------TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
                      LC   K++EA  LL     +    D ++Y T+I+GYF   K   AL ++
Sbjct: 393 DEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIY 452

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            EMK+    P   TYN +  G S++G T++A+ +LN +   G+ PD  T N II G C  
Sbjct: 453 REMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIG 512

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G+V+ A  F + + EK  +      + +++G C    + KA         +G+ +   ++
Sbjct: 513 GKVDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASF 568

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             L+ +LC E   E A  LL  M    + P    Y+ +  AL ++G +E+AQ   +++V+
Sbjct: 569 FKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVD 628

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                 + P  I+Y+  IN +C   + K+A  +  + + +GI  +  
Sbjct: 629 RG-----------------LAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVI 671

Query: 519 TYMNLMN 525
           TY  L+N
Sbjct: 672 TYTVLLN 678



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 272/598 (45%), Gaps = 69/598 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P++ TY   +    +KG L E  D+  DM++ G+ PN  +Y   + G C  G 
Sbjct: 210 LKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGR 269

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
                +V+  +   K   DV+ Y ++I G+C+   L+EA  + +EME     PDV  Y  
Sbjct: 270 SDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCA 329

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ +   G  ++A  L DE+   G+K N V  + +++   + G   +     +  ++ G
Sbjct: 330 LISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMG 389

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D   YN ++DA CK G +EEA  ++  M  K +  + I   T++     + K+ +A 
Sbjct: 390 IFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDAL 449

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G+  D V+Y  L  G+ R+     AL L + M+ + + P T T+N +I GL
Sbjct: 450 NIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGL 509

Query: 301 SQSGKTE-------------------------------QAIDMLNELLQSGMIPDETTFN 329
              GK +                               +A  +L  L + G I  + +F 
Sbjct: 510 CIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFF 569

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            ++   CSEG  EKAL     MV  +  P ++  + ++  L + G +EKA   F   + +
Sbjct: 570 KLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDR 629

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY---------------- 433
           G A D +TY  +I+  C+  ++++A+ +L +M+ + + PD  TY                
Sbjct: 630 GLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSS 689

Query: 434 ---------------AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
                          +A+ + + +     +   +T ++ +  K N+  +Q   +   E I
Sbjct: 690 SSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNN--IQDAINLFNEMI 747

Query: 479 D----PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           D    P +++Y+  ++ +C+ G  K A+ +F+E   KGI  +  T M++++ ++K RK
Sbjct: 748 DRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHT-MSVLHCILKVRK 804



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 255/576 (44%), Gaps = 81/576 (14%)

Query: 33  LSDMKKQGLVPNRTTYNILVSGYCKLGW-------LKEAMR--------VVDLM------ 71
            + +K+ G   +  TY  +V   C  GW       L E ++        +V+L       
Sbjct: 80  FNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDG 139

Query: 72  TQNKSLPD-VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
             N+S    V   + LI     +GM ++AF +  + +     P +++ N L+NR  ES +
Sbjct: 140 IANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRK 199

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  +  +L   G+ PN  T+ I IK +C++G + +A  + R+MEE+G +P+  +Y T
Sbjct: 200 VDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTT 259

Query: 191 LIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            I+  C  G  +  F+++ DV+  K + M+      ++   C E KL EA  +L    K+
Sbjct: 260 FIEGLCLHGRSDLGFKVLQDVINAK-IPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQ 318

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS------ 303
           G+  D   Y  LI+GY       +AL L DEM  + +  +    ++++ GLSQ       
Sbjct: 319 GFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEV 378

Query: 304 -----------------------------GKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
                                        GK E+A+++L E+    M+PD   + T+I G
Sbjct: 379 ANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISG 438

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           +  +G+V  AL  + +M +   KPDIVT N+L  G  R G+ ++AL        +G   D
Sbjct: 439 YFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPD 498

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +VT+N +I  LC   +++DA      +EEK L      Y+A+     E+  + +A     
Sbjct: 499 TVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLI 554

Query: 455 IMVETGKI------------------NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
            + + G+I                  + + +    +     I+P+ I YS+ I      G
Sbjct: 555 RLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAG 614

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             + A  +F     +G+A +  TY  ++NG  +  K
Sbjct: 615 EMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNK 650



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/259 (19%), Positives = 100/259 (38%), Gaps = 30/259 (11%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A   ++++KE       +TY A++  L   G + +   +L E+++     D      I++
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKK----DGNLDFGIVN 131

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
            F + G         + +  +SF   +   + L+      G+ ++A          G A 
Sbjct: 132 LFEALG---------DGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAP 182

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
             ++ N L++ L + R+++ A  +  +++   L P+ YTY          G L EA    
Sbjct: 183 QILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVF 242

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M E+G                 + P+S SY+  I   C  GR     ++ ++     I
Sbjct: 243 RDMEESG-----------------VTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKI 285

Query: 514 AINKSTYMNLMNGLIKRRK 532
            ++   Y  ++ G     K
Sbjct: 286 PMDVFAYTVVIRGFCSEMK 304


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 260/531 (48%), Gaps = 20/531 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD VTY  ++DAL   G+L   ++L   MK  G  P++  Y  L+  +   G 
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L         M  +  +PDV T+ +L++  C A   +EAF     M    +LP++ TYNT
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI     +GR  +A KL+D ++  G++P A T+   I ++ K G+  KA +    M+  G
Sbjct: 408 LICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKG 467

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V  N  + +  + G + EA  M + +   GL  +++T N ++       ++DEA 
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   + G   D +   +LI   ++  + + A +++D MK+ ++ P+  TYN ++ GL
Sbjct: 528 NLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL 587

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ ++AI++   ++     P+  +FNT++  FC   +VE AL+  +KM     KPD+
Sbjct: 588 GKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDV 647

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N ++ GL +E  +  A  FF   + K    D VT  TL+  L K  ++ DA  +  +
Sbjct: 648 LTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARD 706

Query: 421 -MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
            M + +   +R  +  +    +    +++A  F   +V  G     + + ++   P    
Sbjct: 707 FMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG-----ICREDSFLIP---- 757

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGLIK 529
                    +   C   R   A QIF++ T++ GI+   ++Y  L+  L++
Sbjct: 758 --------LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLE 800



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 249/521 (47%), Gaps = 17/521 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           TY TI  AL  +G L ++  +L+ M+K G V N  +YN L+    + G+  EA+ V   M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + TY+ L+         E    L KEME L L P+V T+   I     +G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA+++   +D+ G  P+ VT+ ++I   C  G+++ A ++   M+ NG  PD V Y TL
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D     G+++        M   G   + +T   ++  LC  +  DEA+   +   K+G 
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y TLI G  R  +   ALKL D M+   + P+ +TY   I    +SG+T +A++
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVE 458

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
              ++   G++P+    N  ++     G++ +A    N + E    PD VT N+++    
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G +++A+      I  G   D +  N+LI SL K  R+++A+ +   M++ KL P   
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  + + L + GR+++A +    M+                  ++  P++IS++  ++ 
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIX-----------------KKCSPNTISFNTLLDC 621

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C     + AL++F +        +  TY  ++ GLIK  K
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 220/449 (48%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T+   +  L + GK++E  ++   M  +G  P+  TY +L+   C  G 
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ A  +   M  N   PD   Y  L++ + + G L+       +ME+   +PDVVT+  
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++    EAF   D + + GI PN  T+N +I    + G+I+ A K++  ME  G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY T ID   K+G   +A    + M  KG+  N +  N  L++L    +L EA 
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N   + G   D V+Y  ++  Y +  + + A+ L  EM      P     N++I  L
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ ++A  M + +    + P   T+NT++ G   EG+V+KA++    M+ K   P+ 
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT 612

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++ N LL   C+   +E ALK F    +     D +TYNT+I  L KE ++  AF    +
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           + +K + PD  T   +   LV+ G++ +A
Sbjct: 673 L-KKSMHPDHVTICTLLPGLVKCGQIGDA 700



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 254/524 (48%), Gaps = 21/524 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TY+ ++ AL KK     V  LL +M+  GL PN  T+ I +    + G + EA
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M      PD+ TY +LI+  CNAG LE A  L  +M++    PD V Y TL+++
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341

Query: 125 FFESGRSMEAFK-LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
           F + G  ++ FK    +++  G  P+ VT  I++   CK    D+A      M + G  P
Sbjct: 342 FNDFG-DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILP 400

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TYNTLI    +AG +E+A +++D M   G++    T  T +       +  +A    
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETF 460

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G   + V+    +       +   A  +++ ++E  + P + TYN M+   S+ 
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ ++A+++L+E++++G  PD    N++I      G+V++A Q  ++M +    P +VT 
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N LLSGL +EG ++KA++ F S I K  + +++++NTL+   CK   +E A  + S+M  
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               PD  TY  +   L++  ++  A  F           HQ+         + + P  +
Sbjct: 641 MDCKPDVLTYNTVIYGLIKENKVNHAFWFF----------HQL--------KKSMHPDHV 682

Query: 484 SYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNG 526
           +    +      G+  DA+ I  +   Q    +N+S + +LM G
Sbjct: 683 TICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 261/569 (45%), Gaps = 55/569 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G +P+ V  N  L +L + G+L E + + + +++ GL P+  TYN+++  Y K+G 
Sbjct: 463  MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + EA+ ++  M +N   PDV   N LI+    AG ++EA+++   M+ +KL P VVTYNT
Sbjct: 523  VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L++   + GR  +A +L + +      PN ++ N ++  +CK  +++ A K+   M    
Sbjct: 583  LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC--------- 231
              PD +TYNT+I    K   +  AF     + +K +  + +T+ T+L  L          
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 232  ---------------------------CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
                                        E ++D+A +        G   ++     L+  
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 265  YFRDEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
              + ++   A +++D+  K+  I P+  +YN +I  L +   TE+A D+  ++   G  P
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 324  DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
            D  TFN ++      G++ +  + + +M+ +  KPD +T NI++S L +   L+KAL FF
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 384  RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
               +         TY  LI  L K  RLE+A  L  EM +    P+   +  +     + 
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 444  GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
            G  E A +    MV  G                 I P   SY+  ++  C  GR  +AL 
Sbjct: 942  GDTETACQLFKRMVNEG-----------------IRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 504  IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             F E +  G+  +   Y  ++NGL K ++
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQR 1013



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 242/559 (43%), Gaps = 63/559 (11%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  VTYNT+L  L K+G++ +  +L   M  +   PN  ++N L+  +CK   ++ A+++
Sbjct: 575  PTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKM 634

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF----RLRKEMESLKLLPDVVTYNTLIN 123
               MT     PDV TYN +I G      +  AF    +L+K M      PD VT  TL+ 
Sbjct: 635  FSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH-----PDHVTICTLLP 689

Query: 124  RFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKA------------- 169
               + G+  +A  +  D + +   + N      ++     E ++DKA             
Sbjct: 690  GLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGIC 749

Query: 170  -------------CKIVRNM----------EENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                         CK  R +          ++ G SP   +YN LI    +    E+A+ 
Sbjct: 750  REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD 809

Query: 207  MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            +   M   G   +  T N +L       K+ E + L      R    D ++Y  +I+   
Sbjct: 810  LFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869

Query: 267  RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
            +    ++AL  + ++      P+  TY  +I GL++ G+ E+A+ +  E+   G  P+  
Sbjct: 870  KSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCA 929

Query: 327  TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
             FN +I+G+   G  E A Q   +MV +  +PD+ +  IL+  LC  G +++AL +F   
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 387  ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
               G   D + YN +I+ L K +R+E+A  L +EM  + + PD YTY ++   L  +G +
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 447  EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
            E+A++    +   G                 ++P   +Y+  I  +      + A  +++
Sbjct: 1050 EQAKRMYEELQLAG-----------------LEPDVFTYNALIRGYSLSENPEHAYTVYK 1092

Query: 507  ETRQKGIAINKSTYMNLMN 525
                 G   N  TY  L N
Sbjct: 1093 NMMVDGCNPNIGTYAQLPN 1111



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 159/325 (48%)

Query: 4    FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
             G  P   +YN ++  L +     +  DL  DMK  G  P+  T+N+L++ + K G + E
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 64   AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
               +   M   +  PD  TYN++I+    +  L++A     ++ S    P   TY  LI+
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 124  RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               + GR  EA +L +E+ ++G KPN    NI+I  Y K G  + AC++ + M   G  P
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961

Query: 184  DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            D  +Y  L+D  C AG ++EA    + +   GL  + I  N I++ L   ++++EA  L 
Sbjct: 962  DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021

Query: 244  NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            N    RG   D  +Y +L+          +A ++++E++   + P  FTYNA+I G S S
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081

Query: 304  GKTEQAIDMLNELLQSGMIPDETTF 328
               E A  +   ++  G  P+  T+
Sbjct: 1082 ENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 139/293 (47%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  GC PD  T+N +L    K GK+ E+ +L  +M  +   P+  TYNI++S   K   
Sbjct: 814  MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L +A+     +  +   P   TY  LI+G    G LEEA RL +EM      P+   +N 
Sbjct: 874  LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LIN + + G +  A +L   +   GI+P+  ++ I++   C  G++D+A      ++  G
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD + YN +I+   K+  MEEA  + + M  +G+  +  T N+++  L     +++A 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 241  MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
             +       G   D  +Y  LI GY   E    A  ++  M      P+  TY
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 17/365 (4%)

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
           T N M+++     K++    +   M++     D  TY T+  A    G + +   +++ M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            + G  +N  + N ++H L       EA  +       G      +Y  L+    +   +
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
              + L  EM++  + P+ +T+   I  L ++GK ++A ++   +   G  PD  T+  +
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   C+ GQ+E A +   KM     KPD V    LL      G L+   +F+      G 
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D VT+  L+  LCK R  ++AF     M ++ + P+ +TY  +   L+ +GR+E+A K
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M   G                 + P++ +Y   I+     G    A++ FE+ + K
Sbjct: 424 LLDTMESVG-----------------VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK 466

Query: 512 GIAIN 516
           GI  N
Sbjct: 467 GIVPN 471



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 177/426 (41%), Gaps = 53/426 (12%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D+ TY T+       G   +   +++++ + G   NA ++N +I    + G   +A ++ 
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R M   G  P   TY+ L+ A  K  + E    ++  M   GL+ N  T    +  L   
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K+DEAY                                   +++  M +    P   TY
Sbjct: 276 GKIDEAY-----------------------------------EIFRRMDDEGCGPDLVTY 300

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             +I  L  +G+ E A ++  ++  +G  PD+  + T++  F   G ++   +F ++M  
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
             + PD+VT  IL+  LC+    ++A   F     +G   +  TYNTLI  L +  R+ED
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  LL  ME   + P  YTY        +SG             ETGK     V+     
Sbjct: 421 ALKLLDTMESVGVQPTAYTYITFIDYFGKSG-------------ETGK----AVETFEKM 463

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
             + I P+ ++ +  +      GR ++A  +F   R+ G+A +  TY N+M     +   
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY-NMMMKCYSKVGQ 522

Query: 534 ISKAVD 539
           + +AV+
Sbjct: 523 VDEAVN 528



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 96/191 (50%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +GC P+   +N +++   K G       L   M  +G+ P+  +Y ILV   C  G 
Sbjct: 919  MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + EA+   + +      PD   YN +ING   +  +EEA  L  EM +  ++PD+ TYN+
Sbjct: 979  VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L+     +G   +A ++ +EL   G++P+  T+N +I+ Y      + A  + +NM  +G
Sbjct: 1039 LMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098

Query: 181  FSPDCVTYNTL 191
             +P+  TY  L
Sbjct: 1099 CNPNIGTYAQL 1109



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 20/255 (7%)

Query: 273 RALKLWDEMKE-RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP-DETTFNT 330
           RAL  +  + E   ++ +T T N M+  L    K E    +  E +Q  +I  D  T+ T
Sbjct: 104 RALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVF-EFMQKKIIRRDLDTYLT 162

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           I       G + +     NKM +  F  +  + N L+  L + G   +AL+ +R  + +G
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
                 TY+ L+ +L K+R  E    LL EME+  L P+ YT+      L  +G+++EA 
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +    M + G                   P  ++Y+  I+  C+ G+ ++A ++F + + 
Sbjct: 283 EIFRRMDDEG-----------------CGPDLVTYTVLIDALCNAGQLENAKELFVKMKA 325

Query: 511 KGIAINKSTYMNLMN 525
            G   ++  Y+ L++
Sbjct: 326 NGHKPDQVIYITLLD 340



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD + YN I++ L K  ++ E   L ++M+ +G+VP+  TYN L+      G +++A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             R+ + +      PDV+TYN LI G+  +   E A+ + K M      P++ TY  L N+
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQ 1112


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 224/431 (51%), Gaps = 14/431 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY T++  L  + ++++   L + M+K G  PN  TY  L+ G C+ G +  A
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220

Query: 65  MRVVDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           +++   M  + SL      P V +Y+++I+  C     +EA  L +EM+   + P V++Y
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            +L+          EA +L +E+   G++PN VT N++I   CKEGK+ +A  ++  M +
Sbjct: 281 TSLMWE--------EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQ 332

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+ +TYN+LI+  C  G++  A  +   M  KG + + I    +++  C   K++E
Sbjct: 333 RGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEE 392

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L N   + G   D  +YG L+TG F+  K   A KL+  MK   I    + Y   + 
Sbjct: 393 AMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLN 452

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++G   +A+++ N+L    +  D   FN +I G C  G++E A +   K+ ++  +P
Sbjct: 453 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 512

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+VT NI++   CR G + KA   F+     G   D +TY TLI    + ++LE    LL
Sbjct: 513 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 572

Query: 419 SEMEEKKLGPD 429
             M ++ +  D
Sbjct: 573 HMMVQRDVSLD 583



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 224/460 (48%), Gaps = 14/460 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T N +L+ L    ++ E   +++ + ++G +P+  TY  L+ G C    + +A
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM------ESLKLLPDVVTY 118
             +   M +    P+  TY  L+ G C  G +  A +L +EM        +   P V++Y
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + +I+   +  R  EA  L +E+   G+ P  +++  ++ W       ++A ++   M  
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM-W-------EEAKRLFNEMVN 297

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+ VT+N LID  CK G + EA  +++VM ++G+  N +T N+++   C    L+ 
Sbjct: 298 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 357

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L  S   +G   D + Y  LI GY +  K   A+KL++ M +    P   TY A++ 
Sbjct: 358 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 417

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL Q GK   A  +   +   G+  D   +   ++G C  G + +A++  NK+   + K 
Sbjct: 418 GLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 477

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI   N L+ GLC+ G LE A + F     +    D VTYN +I   C+  ++  A  L 
Sbjct: 478 DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 537

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +ME+    PD+ TYA +     ES +LE+  +   +MV+
Sbjct: 538 QKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 222/459 (48%), Gaps = 14/459 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P   ++  +L  L K    ++V  L + M+  G+ P+  T NIL++  C +  + E + V
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +   +PD+ TY  LI G C    + +A  L   M+ L   P+ +TY TL+     
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 128 SGRSMEAFKLIDEL----DEHGI--KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +G    A KL  E+      +GI  KP  ++++I+I   CK+ + D+A  +   M+  G 
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P  ++Y +L+         EEA R+ + M  +G++ N +T N ++  LC E K+ EA  
Sbjct: 274 TPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 325

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL    +RG   + ++Y +LI G+      N A +L+  M  +   P    Y  +I G  
Sbjct: 326 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 385

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++ K E+A+ + N +LQ G  PD  T+  ++ G    G+V  A +    M       D+ 
Sbjct: 386 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 445

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
              I L+GLC+ G L +A++ F         +D   +N LI  LCK  +LE A+ L  ++
Sbjct: 446 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 505

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            +++L PD  TY  +       G++ +A      M + G
Sbjct: 506 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 237/505 (46%), Gaps = 38/505 (7%)

Query: 56  CKLGWLK--EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           CK G +   +A +   LM  +   P + ++  L++G        + F L  +M    + P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D  T N L+N      R  E   ++  +   G  P+ VT+  +IK  C E +I KA  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG------LKMNTITLNTIL 227
             M++ G +P+ +TY TL+   C+ GN+  A ++   M           K   I+ + I+
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC +++ DEA  L      +G     +SY +L+      E+A R   L++EM  + + 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW-----EEAKR---LFNEMVNQGVQ 301

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+  T+N +I  L + GK  +A D+L  ++Q G++P+  T+N++I GFC  G +  A + 
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              M  K  +PD++   +L++G C+   +E+A+K +   +  GK  D  TY  L++ L +
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 421

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK---------------- 451
             ++ DA  L   M+   +  D Y Y      L ++G L EA +                
Sbjct: 422 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 481

Query: 452 FTSI---MVETGKINHQVVQPNTSKTP-EEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           F  +   + + GK+  +       K P EE+ P  ++Y+  I+E C  G+   A  +F++
Sbjct: 482 FNCLIDGLCKAGKL--ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 539

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
             + G   +K TY  L+ G  + +K
Sbjct: 540 MEKNGCTPDKITYATLIRGFFESKK 564



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 178/353 (50%), Gaps = 8/353 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  ++Y+ I+DAL K  + +E RDL  +MK QG+ P        V  Y  L W +EA R+
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPT-------VISYTSLMW-EEAKRL 291

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      P+V T+N+LI+  C  G + EA  L + M    ++P+++TYN+LI  F  
Sbjct: 292 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 351

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A +L   +   G +P+ + + ++I  YCK  K+++A K+   M + G  PD  T
Sbjct: 352 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+    + G + +A ++  VM   G+  +       L+ LC    L EA  L N   
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
                LD   +  LI G  +  K   A +L++++ + ++ P   TYN MI    + G+  
Sbjct: 472 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 531

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +A  +  ++ ++G  PD+ T+ T+I GF    ++EK ++  + MV++    D+
Sbjct: 532 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 130/251 (51%), Gaps = 35/251 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+ +TYN++++     G LN  R+L   M  +G  P+   Y +L++GYCK   ++EA
Sbjct: 334 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 393

Query: 65  MRVVDLMTQNKSLPDVWTYNMLI-----------------------------------NG 89
           M++ + M Q    PDV TY  L+                                   NG
Sbjct: 394 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 453

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            C  G L EA  L  +++S  +  D+  +N LI+   ++G+   A++L ++L +  ++P+
Sbjct: 454 LCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPD 513

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+NIMI  +C+ G++ KA  + + ME+NG +PD +TY TLI    ++  +E+   ++ 
Sbjct: 514 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573

Query: 210 VMGRKGLKMNT 220
           +M ++ + ++ 
Sbjct: 574 MMVQRDVSLDV 584


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 260/523 (49%), Gaps = 38/523 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD VT N  +  L            L+ +  +G  P+R+++N +VS  CKLG +K A+ 
Sbjct: 18  LPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVVSFVCKLGQVKFAVD 77

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES---LKLLPDVVTYNTLIN 123
           +V  M +    PDV +YN LI+G C  G +  A  + + + +       PD+V++NTL N
Sbjct: 78  IVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFN 137

Query: 124 RFFESGRSMEAFKLIDELDEH-GI-----KPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
            F          K++DE+  + G+      PN VT++  I  +CK G++  A K    M+
Sbjct: 138 GF-------SKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMK 190

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
            +   P+ VT+  LID  CKAG++E    + + M R  + +N +T   ++   C + ++ 
Sbjct: 191 RDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  +     +     + + Y T+I G+F+   ++ A+K   +M  + +      Y  +I
Sbjct: 251 RAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL   GK ++A +++ ++ +  ++PD   F T+++ +   G+++ A+  ++K++E+ F+
Sbjct: 311 SGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD+V  + ++ G+ + G L +A+ +F +     +  + V Y  LI +LCKE    +   L
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAISYFCT-----EKANDVMYTVLIDALCKEEDFIEVERL 425

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
            S++ E  L PD++ Y +    L + G L +A K  + MV+ G                 
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEG----------------- 468

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           ++    +Y+  I    S+G   +A Q+F+E  + G+  + + +
Sbjct: 469 LELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVF 511



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 210/425 (49%), Gaps = 6/425 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           GF C PD V++NT+ +   K   L+EV   +  M K    PN  TY+  +  +CK G LK
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDMFCKSGELK 180

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A++  + M ++   P+V T+  LI+G+C AG LE    L +EM  +++  +VVTY  LI
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + F + G    A  +   + E  ++PN++ +  +I  + + G  D A K +  M   G  
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            D   Y  +I   C  G ++EA  +++ M +  L  + +   T+++      ++  A  +
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNM 360

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +   +RG+  D V+  T+I G  ++ + + A+  +   K   +M     Y  +I  L +
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVM-----YTVLIDALCK 415

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
                +   + +++ ++G++PD+  + + I G C +G +  A +   KMV++  + D+  
Sbjct: 416 EEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFA 475

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ GL  +G++ +A + F   +  G   DS  ++ LI +  KE  +  A  LL +M+
Sbjct: 476 YTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQ 535

Query: 423 EKKLG 427
            + L 
Sbjct: 536 TRGLA 540



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 217/458 (47%), Gaps = 29/458 (6%)

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
           M++EA +    +     LPD VT N  I++   S     + K +  L   G  P+  + N
Sbjct: 1   MVKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFN 60

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM-GR 213
            ++ + CK G++  A  IV +M   G  PD ++YN+LID +C+ G++  A  +++ +   
Sbjct: 61  SVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRAS 120

Query: 214 KGL--KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            G   K + ++ NT+ +     K LDE ++ +    K     + V+Y T I  + +  + 
Sbjct: 121 YGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDMFCKSGEL 179

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
             ALK ++ MK   + P+  T+  +I G  ++G  E  + +  E+ +  M  +  T+  +
Sbjct: 180 KLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTAL 239

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I GFC +G++++A   + +M+E   +P+ +    +++G  + G  + A+KF    + +G 
Sbjct: 240 IDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            +D   Y  +IS LC   +L++A  ++ +ME+  L PD   +  +  A  +SGR++ A  
Sbjct: 300 RLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVN 359

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEID-------------------PSSISYSEKINEH 492
               ++E G       +P+       ID                    + + Y+  I+  
Sbjct: 360 MYHKLIERG------FEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDAL 413

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           C +  + +  ++F +  + G+  +K  Y + + GL K+
Sbjct: 414 CKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 11/189 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD V  +T++D + K G+L+E        K      N   Y +L+   CK     E  R+
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAISYFCTEK-----ANDVMYTVLIDALCKEEDFIEVERL 425

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              +++   +PD + Y   I G C  G L +AF+L+ +M    L  D+  Y TLI     
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTS 485

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G  +EA ++ DE+   G+ P++   +++I+ Y KEG +  A  ++ +M+  G +     
Sbjct: 486 KGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLA----- 540

Query: 188 YNTLIDANC 196
              + DA+C
Sbjct: 541 -RAVSDADC 548


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 247/523 (47%), Gaps = 19/523 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           C+PD  + N++L+ L K GK+     +  +M  + G V N T   I+V G CK G +++ 
Sbjct: 133 CVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVC-IMVKGLCKEGKVEDG 191

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++       +P++  YN LI+G+C  G  E A  L KE++    LP V TY  +IN 
Sbjct: 192 WKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIING 251

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+     KL+ E+ E G+  +   +N +I    K G   +A   V  M ++G  PD
Sbjct: 252 FCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPD 311

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN LI  +C  G + +A ++++   ++GL  N ++   ++H  C + +   A  LL 
Sbjct: 312 MATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLI 371

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S+RG+  D V+Y  LI G     + + AL + ++M E+ ++P    YN ++ GL + G
Sbjct: 372 KMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKG 431

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +   A  +L E+L   + PD     T++ GF   G  E+A +     +EK   P +V  N
Sbjct: 432 RLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYN 491

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++ G C+ G+++ AL  F+  I    + D  TY+T+I    K   L  A  +   M + 
Sbjct: 492 AMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKG 551

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY  +      SG +  A+K    M+                    + P+ ++
Sbjct: 552 ACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSL-----------------RLKPNVVT 594

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           Y+  I   C       A   FE+   +    N  TY  LMNGL
Sbjct: 595 YTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 247/538 (45%), Gaps = 19/538 (3%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+P+ V YNT++D   KKG       L  ++K +G +P   TY  +++G+CK G  +
Sbjct: 200 GRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE 259

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
              +++  M++      +  YN +I+     G   EA      M      PD+ TYN LI
Sbjct: 260 VVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILI 319

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
                 G   +A +L+++  + G+ PN V++  +I  YCK+G+  +A  ++  M E G  
Sbjct: 320 TGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHK 379

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VTY  LI     AG ++ A  + + M  KG+  +    N ++  LC + +L  A +L
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L     +    D     TL+ G+ R      A KL++   E+ I P    YNAMI G  +
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCK 499

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G  + A+     ++Q    PDE T++TII G+     +  AL+    MV+ + KP++VT
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             +L++G C  G + +A K F+  +      + VTY  LI   CK   L  A     +M 
Sbjct: 560 YTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQML 619

Query: 423 EKKLGPDRYTYAAIHTAL-------VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            +K  P+  TY  +   L       + + R E+ +            N  V++       
Sbjct: 620 MEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTE------------NSLVLESFGMMIS 667

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           +  D  + SY+  +   C     K AL + ++   KG   +  + + L++GL    +S
Sbjct: 668 DGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRS 725



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 239/506 (47%), Gaps = 29/506 (5%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN I+DA FK G   E  D +  M K G  P+  TYNIL++G C  G + +A ++++   
Sbjct: 280 YNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAI 339

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +   LP+  +Y  LI+ +C  G    A  L  +M      PD+VTY  LI+    +G   
Sbjct: 340 KRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVD 399

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
            A  + +++ E G+ P+A  +N+++   CK+G++  A  ++  M +   +PD     TL+
Sbjct: 400 VALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLV 459

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   + G+ EEA ++ ++   KG+    +  N ++   C    + +A +      +  + 
Sbjct: 460 DGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHS 519

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            DE +Y T+I GY +    + AL+++  M +    P+  TY  +I G   SG   +A   
Sbjct: 520 PDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKT 579

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC- 371
             ++L   + P+  T+  +I  FC    + KA  F  +M+ +   P+ VT N L++GL  
Sbjct: 580 FKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTN 639

Query: 372 ---------REGILEKALKF--FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                    R    E +L    F   I  G    + +YN+++  LC+ + ++ A  L  +
Sbjct: 640 NVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDK 699

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K   PD  +  A+   L   GR   +Q + +++  + K+N + +Q            
Sbjct: 700 MMSKGFLPDPVSLVALLHGLCLEGR---SQDWNNVI--SCKLNERELQ------------ 742

Query: 481 SSISYSEKINEHCSQGRYKDALQIFE 506
            ++ YSEK++   SQG+  +A  I  
Sbjct: 743 VAVKYSEKLDAFLSQGQTSEASLILH 768



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 214/472 (45%), Gaps = 57/472 (12%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG---RSMEAFKLIDELDEHGIKPNAVT 152
             E   L K M+S  L+P    ++ +I+ F + G   R++E ++   ++  H   P+  +
Sbjct: 82  FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKI--HHCVPDVFS 139

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            N ++    K GK++ ACK+   M +     D  T   ++   CK G +E+ +++++   
Sbjct: 140 CNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRW 199

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            +G   N +  NT++   C +   + A +L      +G+     +YG +I G+ +  K  
Sbjct: 200 GRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE 259

Query: 273 RALKLWDEMKERQI-----------------------------------MPSTFTYNAMI 297
              KL  EM ER +                                    P   TYN +I
Sbjct: 260 VVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILI 319

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G    G+  +A  +L + ++ G++P++ ++  +IH +C +G+  +AL    KM E+  K
Sbjct: 320 TGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHK 379

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD+VT   L+ GL   G ++ AL      + KG   D+  YN L+S LCK+ RL  A  L
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L+EM ++ + PD +  A +    +  G  EEA+K   + +E G                 
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKG----------------- 482

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           IDP  + Y+  I  +C  G  KDAL  F+   Q   + ++ TY  +++G IK
Sbjct: 483 IDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIK 534



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 166/422 (39%), Gaps = 82/422 (19%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP+ V+Y  ++    K+G+     DLL  M ++G  P+  TY  L+ G    G +  A
Sbjct: 342 GLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVA 401

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V + M +   LPD   YN+L++G C  G L  A  L  EM    + PD     TL++ 
Sbjct: 402 LTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDG 461

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F   G   EA KL +   E GI P  V +N MIK YCK G +  A    + M +   SPD
Sbjct: 462 FIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPD 521

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+T+ID   K  ++  A RM  +M +   K N +T   +++  C    ++ A     
Sbjct: 522 EFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFK 581

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS--- 301
                    + V+Y  LI  + +     +A   +++M   + +P+  TYN ++ GL+   
Sbjct: 582 QMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNV 641

Query: 302 --------------------------------------------QSGKTEQAIDMLNELL 317
                                                       Q    + A+ + ++++
Sbjct: 642 DFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMM 701

Query: 318 QSGMIPDETTFNTIIHGFC-----------------------------------SEGQVE 342
             G +PD  +   ++HG C                                   S+GQ  
Sbjct: 702 SKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTS 761

Query: 343 KA 344
           +A
Sbjct: 762 EA 763



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 20/321 (6%)

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           E +   +  S  G YL+E S  +L+    R    +    L   MK + +MP+   ++ +I
Sbjct: 49  EFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTREAFSLVI 108

Query: 298 WGLSQSGKTEQAIDMLNELLQ-SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
              +  G  ++A++     ++    +PD  + N++++     G+VE A + +++MV+++ 
Sbjct: 109 SVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNG 168

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           + D  T  I++ GLC+EG +E   K       +G   + V YNTLI   CK+   E A  
Sbjct: 169 EVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANV 228

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF----------TSIMVETGKINHQV 466
           L  E++ K   P   TY AI     + G+ E   K            SI +    I+ Q 
Sbjct: 229 LFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQF 288

Query: 467 VQPNTSKTPEEI--------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                 +  + +        DP   +Y+  I   CS G    A Q+ E+  ++G+  NK 
Sbjct: 289 KHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKV 348

Query: 519 TYMNLMNGLIKRRKSISKAVD 539
           +Y  L++   K+ + + +A+D
Sbjct: 349 SYTPLIHNYCKQGEYL-RALD 368


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 248/521 (47%), Gaps = 17/521 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LPD +  N +L+AL ++ K+   R +  +M K+    +  +  I+V G CK   ++E  +
Sbjct: 167 LPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRK 226

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +++       +P++  YN L++G+   G +E A  L KE++    LP   TY  +IN   
Sbjct: 227 LINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLC 286

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +         L+ E+ E G+  N   +N ++    K G   +  K +R + ENG  PD  
Sbjct: 287 KKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDIT 346

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYNTLI  +C+ G + EA  +++   ++GL  N ++   ++H  C + K   A+ L    
Sbjct: 347 TYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGM 406

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           +++G+ LD V+YG L+ G     + + AL + D+M ER ++P    YN ++ GL + G+ 
Sbjct: 407 TEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRL 466

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
             A  +L E+L   +  D     T++ GF   G++++A +     + K   P +V  N +
Sbjct: 467 SAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAM 526

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+ G++  AL   +       + D  TY+T+I    K+  L +A  L  +M ++K 
Sbjct: 527 IKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKC 586

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+  TY ++      +G    A+K    M  +G                 + P+ ++Y+
Sbjct: 587 KPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSG-----------------LKPNVVTYT 629

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I   C +G+   A   FE         N  T+  L+NGL
Sbjct: 630 ILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL 670



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 242/525 (46%), Gaps = 3/525 (0%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+P+ V YNT++D  +K+G +     L  ++K +G +P   TY I+++G CK    K
Sbjct: 233 GKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFK 292

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
               ++  M +     +V  YN +++     G   E  +  + +      PD+ TYNTLI
Sbjct: 293 AVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLI 352

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +     G+  EA +L++   + G+ PN +++  +I  YCK+GK  +A  +   M E G  
Sbjct: 353 SGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHP 412

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            D V Y  L+     AG ++ A  + D M  +G+  +    N +++ LC + +L  A +L
Sbjct: 413 LDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLL 472

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L     +   LD     TL+ G+ R  K + A KL++    + + P    YNAMI G  +
Sbjct: 473 LVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCK 532

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G    A+  +  +      PDE T++TII G+  +  +  AL+   +MV++  KP++VT
Sbjct: 533 FGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVT 592

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L++G CR G   +A K F      G   + VTY  LI   CKE ++  A      M 
Sbjct: 593 YTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELML 652

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
             +  P+  T+  +   L  +     + K    +     +     +   S   E+     
Sbjct: 653 LNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQ---RV 709

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +Y+  +   C       ALQ+ ++   KGI  +  ++  L+ GL
Sbjct: 710 AAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGL 754



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 21/345 (6%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D     T++D   + GKL+E + L      +G+ P    YN ++ GYCK G + +A+  V
Sbjct: 484 DAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCV 543

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      PD +TY+ +I+G+     L  A +L  +M   K  P+VVTY +LIN F  +
Sbjct: 544 QRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRT 603

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G S  A K  +E+   G+KPN VT+ I+I  +CKEGKI KAC     M  N   P+ VT+
Sbjct: 604 GDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTF 663

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI+                     GL  N  T  +       E K         +   
Sbjct: 664 NYLIN---------------------GLTNNLATAVSNKANESLEIKASLMMDFFRTMIS 702

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G+     +Y +++      +  N AL+L D+M  + I P   ++ A+++GL   G++++
Sbjct: 703 DGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             + ++  L    +     ++  ++ F  +G   +A +  + ++E
Sbjct: 763 WKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLLE 807



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 189/405 (46%), Gaps = 24/405 (5%)

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-NMEENGFSPDCVTYNT 190
           +E   L++ +    + P     + ++  Y   G +++A ++     + + + PD +  N 
Sbjct: 116 VEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNA 175

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L++A  +   +E A ++ + M ++    +  ++  ++  LC E+K++E   L+N    +G
Sbjct: 176 LLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKG 235

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V Y TL+ GY++     RA  L+ E+K +  +P+T TY  MI GL +    +   
Sbjct: 236 CIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVD 295

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEG---QVEKALQFHNKMVEKSFKPDIVTCNILL 367
            +L E+ + G+  +   +N+I+      G   +V K L++   + E   +PDI T N L+
Sbjct: 296 GLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRW---ITENGCEPDITTYNTLI 352

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           SG CR+G + +A +     I +G + + ++Y  LI   CK+ +   AF L   M EK   
Sbjct: 353 SGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHP 412

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            D   Y A+   LV +G ++ A      MVE G +                 P +  Y+ 
Sbjct: 413 LDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVL-----------------PDANVYNV 455

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +N  C +GR   A  +  E   + ++++      L++G I+  K
Sbjct: 456 LMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGK 500


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 212/387 (54%), Gaps = 2/387 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P+ +T+ T++  L  KG++ ++      +  Q    N+ +Y  L++G CK G  + 
Sbjct: 74  LGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRC 133

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A++++ ++    + P+V  Y+ +I+G C   ++ EA+ L  EM++ ++ P+V+TYNTLI 
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F  +G+ M AF L+ E+    I P+  T +I+I   CKEGK   A +I   M + G +P
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNP 251

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  +YN +I+  CK   ++EA  ++  M  K +  +T+T N+++  LC   ++  A  L+
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N    RG   D V+Y +L+    +++  ++A  L+ +MKER I P+ +TY A+I GL + 
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 371

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + A ++   LL  G   D  T+  +I G C EG  ++AL   +KM +    P+ VT 
Sbjct: 372 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431

Query: 364 NILLSGLCREGILEKALKFFRSWILKG 390
            I++  L  +   +KA K     I KG
Sbjct: 432 EIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 232/450 (51%), Gaps = 2/450 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + +N IL +L K      V  L   M  +G+  N  T +IL++ +C LG +  +  ++  
Sbjct: 11  IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +    P+  T+  L+ G C  G +++      ++ +     + V+Y TL+N   ++G 
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           +  A KL+  +++   +PN V ++ +I   CK+  +++A  +   M+     P+ +TYNT
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI A C AG +  AF ++  M  K +  +  T + ++  LC E K   A  + ++  + G
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMG 248

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  SY  +I G  + ++ + A+ L  EM  + ++P T TYN++I GL +SG+   A+
Sbjct: 249 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 308

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           +++NE+   G   D  T+ +++   C    ++KA     KM E+  +P + T   L+ GL
Sbjct: 309 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 368

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G L+ A + F+  ++KG  +D  TY  +IS LCKE   ++A  + S+ME+    P+ 
Sbjct: 369 CKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNA 428

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            T+  I  +L E    ++A+K    M+  G
Sbjct: 429 VTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 206/415 (49%), Gaps = 19/415 (4%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           ++ +N ++    +    +    L  ++D  GI+ N VT +I+I  +C  G++  +  ++ 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            + + G+ P+ +T+ TL+   C  G +++     D +  +  + N ++  T+L+ LC   
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           +   A  LL     R    + V Y  +I G  +D+  N A  L+ EM  R+I P+  TYN
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I     +G+   A  +L+E++   + PD  TF+ +I   C EG+   A Q  + MV+ 
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P++ + NI+++GLC+   +++A+   R  + K    D+VTYN+LI  LCK  R+  A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L++EM  +    D  TY ++  AL ++  L++A      M E G              
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG-------------- 353

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              I P+  +Y+  I+  C  GR K+A ++F+    KG  I+  TY  +++GL K
Sbjct: 354 ---IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 405



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 193/388 (49%), Gaps = 2/388 (0%)

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           ++ T ++LIN +C+ G +  +F L  ++  L   P+ +T+ TL+      G   +     
Sbjct: 44  NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
           D++     + N V++  ++   CK G+   A K++R +E+    P+ V Y+ +ID  CK 
Sbjct: 104 DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKD 163

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
             + EA+ +   M  + +  N IT NT++   C   +L  A+ LL+    +    D  ++
Sbjct: 164 KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTF 223

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             LI    ++ K   A +++  M +  + P+ ++YN MI GL +  + ++A+++L E+L 
Sbjct: 224 SILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 281

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
             M+PD  T+N++I G C  G++  AL   N+M  +    D+VT   LL  LC+   L+K
Sbjct: 282 KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 341

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A   F     +G      TY  LI  LCK  RL++A  L   +  K    D +TY  + +
Sbjct: 342 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 401

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQV 466
            L + G  +EA    S M + G I + V
Sbjct: 402 GLCKEGMFDEALAIKSKMEDNGCIPNAV 429



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 205/416 (49%), Gaps = 2/416 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VT + +++     G++     LL  + K G  PN  T+  L+ G C  G +K+ +   D 
Sbjct: 46  VTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDK 105

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           +       +  +Y  L+NG C  G    A +L + +E     P+VV Y+ +I+   +   
Sbjct: 106 VVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKL 165

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA+ L  E+D   I PN +T+N +I  +C  G++  A  ++  M     +PD  T++ 
Sbjct: 166 VNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSI 225

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LIDA CK G  + A ++   M + G+  N  + N +++ LC  K++DEA  LL     + 
Sbjct: 226 LIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 283

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D V+Y +LI G  +  +   AL L +EM  R       TY +++  L ++   ++A 
Sbjct: 284 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 343

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  ++ + G+ P   T+  +I G C  G+++ A +    ++ K    D+ T  +++SGL
Sbjct: 344 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 403

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           C+EG+ ++AL         G   ++VT+  +I SL ++   + A  LL EM  K L
Sbjct: 404 CKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 164/315 (52%), Gaps = 2/315 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ V Y+ I+D L K   +NE  DL S+M  + + PN  TYN L+  +C  G L  A  +
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M      PDV+T+++LI+  C  G  + A ++   M  + + P+V +YN +IN   +
Sbjct: 208 LHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 265

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
             R  EA  L+ E+    + P+ VT+N +I   CK G+I  A  ++  M   G   D VT
Sbjct: 266 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 325

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +L+DA CK  N+++A  +   M  +G++    T   ++  LC   +L  A  L     
Sbjct: 326 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 385

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G  +D  +Y  +I+G  ++   + AL +  +M++   +P+  T+  +I  L +  + +
Sbjct: 386 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 445

Query: 308 QAIDMLNELLQSGMI 322
           +A  +L+E++  G++
Sbjct: 446 KAEKLLHEMIAKGLL 460



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 146/281 (51%), Gaps = 2/281 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            P+ +TYNT++ A    G+L     LL +M  + + P+  T++IL+   CK G  K A +
Sbjct: 182 FPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQ 239

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           +   M Q    P+V++YN++ING C    ++EA  L +EM    ++PD VTYN+LI+   
Sbjct: 240 IFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLC 299

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +SGR   A  L++E+   G   + VT+  ++   CK   +DKA  +   M+E G  P   
Sbjct: 300 KSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY 359

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY  LID  CK G ++ A  +   +  KG  ++  T   ++  LC E   DEA  + +  
Sbjct: 360 TYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKM 419

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
              G   + V++  +I   F  ++ ++A KL  EM  + ++
Sbjct: 420 EDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 151/326 (46%), Gaps = 22/326 (6%)

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           + MDV   KG++ N +TL+ +++  C   ++  ++ LL    K GY  + +++ TL+ G 
Sbjct: 34  KQMDV---KGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGL 90

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
               +  + L   D++  +    +  +Y  ++ GL ++G+T  AI +L  +      P+ 
Sbjct: 91  CLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNV 150

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
             ++ II G C +  V +A   +++M  +   P+++T N L+   C  G L  A      
Sbjct: 151 VMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHE 210

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            ILK    D  T++ LI +LCKE +  +A  +   M +  + P+ Y+Y  +   L +  R
Sbjct: 211 MILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           ++EA      M+    +                 P +++Y+  I+  C  GR   AL + 
Sbjct: 269 VDEAMNLLREMLHKNMV-----------------PDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 506 EETRQKGIAINKSTYMNLMNGLIKRR 531
            E   +G   +  TY +L++ L K +
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQ 337



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 136/259 (52%), Gaps = 19/259 (7%)

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            + L  +M  + I  +  T + +I      G+   +  +L ++L+ G  P+  T+ T++ 
Sbjct: 29  VISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMK 88

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C +G+V+K L FH+K+V ++F+ + V+   LL+GLC+ G    A+K  R    +    
Sbjct: 89  GLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRP 148

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           + V Y+ +I  LCK++ + +A+ L SEM+ +++ P+  TY  +  A   +G+L  A  F+
Sbjct: 149 NVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGA--FS 206

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
            +        H+++  N       I+P   ++S  I+  C +G  K+A QIF    Q G+
Sbjct: 207 LL--------HEMILKN-------INPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGV 249

Query: 514 AINKSTYMNLMNGLIKRRK 532
             N  +Y  ++NGL K ++
Sbjct: 250 NPNVYSYNIMINGLCKCKR 268



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 112/216 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+  +YN +++ L K  +++E  +LL +M  + +VP+  TYN L+ G CK G 
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +++ M       DV TY  L++  C    L++A  L  +M+   + P + TY  
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + GR   A +L   L   G   +  T+ +MI   CKEG  D+A  I   ME+NG
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             P+ VT+  +I +  +    ++A +++  M  KGL
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 53/108 (49%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P   TY  ++D L K G+L   ++L   +  +G   +  TY +++SG CK G   EA
Sbjct: 353 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 412

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
           + +   M  N  +P+  T+ ++I         ++A +L  EM +  LL
Sbjct: 413 LAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 215/422 (50%), Gaps = 1/422 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P N  +  ++    ++GK+ EV  LL+ M + G   +  T  ++V   C+ G  K+ 
Sbjct: 68  GVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 127

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
                 M +  + P+V  Y   I+G C    +++AF + +EM    L P+V T+ TLI+ 
Sbjct: 128 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 187

Query: 125 FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G +  AF+L  +L      KPN  T+ +MI  YC+EGK+ +A  ++  M E G  P
Sbjct: 188 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 247

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLI  +CK G+ + AF +M+ M ++G   N  T N ++   C + K+ EAY +L
Sbjct: 248 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 307

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             A+ +G   D+++Y  LIT + +      AL L+D M E    P    Y ++I    Q 
Sbjct: 308 RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQ 367

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            + E++    ++ L  G++P + T+ ++I G+C  G+   AL+   +MV+     D +T 
Sbjct: 368 RQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITY 427

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+SGLC+E  LE+A   +   + K      VT  TL    C+  +   A  +L  +++
Sbjct: 428 GALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK 487

Query: 424 KK 425
           ++
Sbjct: 488 RQ 489



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 218/454 (48%), Gaps = 37/454 (8%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G   DN T   ++ +L +KG+  +V +    M + G  PN   Y   + G CK  ++K+
Sbjct: 102 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ 161

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL-RKEMESLKLLPDVVTYNTLI 122
           A  V++ M      P+V+T+  LI+G C  G  E AFRL  K ++S    P+V TY  +I
Sbjct: 162 AFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 221

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             +   G+   A  L+  + E G+KPN  T+  +I  +CK G  D+A +++  M++ GF 
Sbjct: 222 GGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 281

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+  TYN +ID  CK G ++EA++++ +   +GLK + IT   ++   C +  +  A  L
Sbjct: 282 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 341

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
            +   + G   D  +Y +LI+ Y +  +   + K +D+     ++P+  TY +MI G  +
Sbjct: 342 FDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCK 401

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G++  A+ +   ++Q+G   D  T+  +I G C E ++E+A   +  M++K   P  VT
Sbjct: 402 VGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVT 461

Query: 363 CNILLSGLCRE--------------------------------GILEKALKFFRSWILKG 390
              L    CR                                 G ++ A  F +  + + 
Sbjct: 462 RVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDED 521

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            AVD  TY   I+S  +  R    + L SEM EK
Sbjct: 522 YAVDHATYTGFINSCYENNR----YALASEMSEK 551



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 207/444 (46%), Gaps = 1/444 (0%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++ A  + G+L E  D++ +M+  GL     T N ++    + G    A +V D MT+  
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P    +  L+   C  G +EE   L   M       D  T   ++    E GR  +  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           +    + E G  PN V +   I   CK   + +A  ++  M   G  P+  T+ TLID  
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 196 CKAGNMEEAFRM-MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
           CK G  E AFR+ + ++     K N  T   ++   C E KL  A MLL    ++G   +
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y TLI G+ +    +RA +L ++MK+   +P+ +TYNA+I G  + GK ++A  +L 
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
                G+  D+ T+  +I   C +G +  AL   ++MVE    PDI     L+S  C++ 
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 368

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
            +E++ KFF   ++ G      TY ++I+  CK  R   A  +   M +     D  TY 
Sbjct: 369 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 428

Query: 435 AIHTALVESGRLEEAQKFTSIMVE 458
           A+ + L +  RLEEA+     M++
Sbjct: 429 ALISGLCKESRLEEAKALYEGMLD 452



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           EGF  LP+  TYN ++D   KKGK+ E   +L     QGL  ++ TY IL++ +CK G +
Sbjct: 278 EGF--LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHI 335

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
             A+ + D M +N   PD+  Y  LI+ +C    +EE+ +   +   + LLP   TY ++
Sbjct: 336 TYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM 395

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I  + + GRS  A ++ + + ++G   +++T+  +I   CKE ++++A  +   M +   
Sbjct: 396 IAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL 455

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P  VT  TL    C+      A  ++D + +   +    T++ ++  L     +D A +
Sbjct: 456 VPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK---RQQVHTVDVVVRKLSALGDVDAASL 512

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            L       Y +D  +Y    TG+      N    L  EM E+
Sbjct: 513 FLKKVLDEDYAVDHATY----TGFINSCYENNRYALASEMSEK 551


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 254/536 (47%), Gaps = 12/536 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GCL + V+Y  ++    +  +++E   L S M +    P   TY +++   C+LG 
Sbjct: 265 MPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGR 324

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ +   MT+    P+V TY +LI   C     ++A ++   M    L+P VVTYN 
Sbjct: 325 KTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNA 384

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G S  A +++  ++ +   PNA T+N +I  +C+   I KA  ++  M E  
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTYN LI   CK G++  A++++ +M   GL  +  T +  + TLC    ++EA 
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  S  ++G   +EV Y TLI GY +  K +    L D+M     +P++ TYN++I G 
Sbjct: 505 SLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +    ++A  +++ +++  + P   T+  +I     + + ++A    ++M+     PD+
Sbjct: 565 CKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV 624

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                 +   C  G L+ A         KG   D++ Y   I +  +   ++ AFG+L  
Sbjct: 625 FIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKR 684

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-----------KINHQVVQP 469
           M E    P  YTY+ +   L  +   E +       + +G           +++++    
Sbjct: 685 MHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLD 744

Query: 470 NTSKTPEE-IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
              K  E    P++ +Y + I   C  G  + A ++F+  ++KG + N+  Y +L+
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 249/533 (46%), Gaps = 12/533 (2%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TY +++    +   ++    +   M  +G + N  +Y  L+ G+C+   + EA+++ 
Sbjct: 238 DTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLF 297

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M ++   P V TY ++I   C  G   EA  + KEM      P+V TY  LI    E 
Sbjct: 298 SQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCED 357

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
               +A K+++ + E G+ P+ VT+N +I  YCK+G    A +I+  ME N  SP+  TY
Sbjct: 358 SNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTY 417

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N LI   C+  N+ +A  ++  M  + L+ N +T N ++H  C E  L  AY LL+  ++
Sbjct: 418 NELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNE 477

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   DE +Y   I    +      A  L++ +KE+ I  +   Y+ +I G  + GK   
Sbjct: 478 SGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSD 537

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
              +L+++L +G +P+  T+N++I G+C E   ++A    + M+++  +P   T  IL+ 
Sbjct: 538 GRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILID 597

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
            L ++   ++A   F   +  G   D   Y   I + C   RL+DA  L+ +M  K + P
Sbjct: 598 NLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMP 657

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETG-----KINHQVVQPNTSKTPEEIDPSSI 483
           D   Y     A    G ++ A      M E G          +++  ++  P+E+  SS 
Sbjct: 658 DTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSE 717

Query: 484 SY-------SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                    S   +    +  Y+  L +F +  + G A N +TY   + GL K
Sbjct: 718 LSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCK 770



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 242/508 (47%), Gaps = 17/508 (3%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN +L  L +   ++E++ +  +M    + PN  T N +V+GYCKLG + EA   V  + 
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           Q     D +TY  LI G+C    ++ A  +   M +   L + V+Y  LI+ F E+ R  
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA KL  ++ E    P   T+ ++I   C+ G+  +A  + + M E    P+  TY  LI
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
            + C+  N ++A ++++ M  KGL  + +T N ++   C +     A  +L+        
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            +  +Y  LI G+ R +  ++A+ L  +M ER++ P+  TYN +I G  + G    A  +
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L+ + +SG++PDE T++  I   C  G VE+A      + EK  K + V  + L+ G C+
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G +          +  G   +S+TYN+LI   CKE+  ++A  L+  M ++ + P   T
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +   L++    ++A      M+ TG                   P    Y+  I+ +
Sbjct: 592 YTILIDNLLKDDEFDQAHDMFDQMLSTGS-----------------HPDVFIYTAFIHAY 634

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTY 520
           CS GR KDA  +  +   KGI  +   Y
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLY 662



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 229/488 (46%), Gaps = 29/488 (5%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+  TY  ++ +L +    ++ + +L+ M ++GL+P+  TYN L+ GYCK G    A+
Sbjct: 340 CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASAL 399

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++ LM  N   P+  TYN LI G+C    + +A  L  +M   KL P+VVTYN LI+  
Sbjct: 400 EILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQ 459

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G    A+KL+  ++E G+ P+  T+++ I   CK G +++A  +  +++E G   + 
Sbjct: 460 CKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANE 519

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y+TLID  CK G + +   ++D M   G   N+IT N+++   C EK   EA +L++ 
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI 579

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             KR       +Y  LI    +D++ ++A  ++D+M      P  F Y A I      G+
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A  ++ ++   G++PD   +   I  +   G ++ A     +M E   +P   T + 
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSC 699

Query: 366 LLSGLC-----------------------------REGILEKALKFFRSWILKGKAVDSV 396
           L+  L                              R    E  L  F      G A ++ 
Sbjct: 700 LIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNAN 759

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TY   I+ LCK   LE A  L   M+EK   P+   Y ++     + G   EA ++  IM
Sbjct: 760 TYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819

Query: 457 VETGKINH 464
           +E   + H
Sbjct: 820 IENRHLPH 827



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 218/482 (45%), Gaps = 30/482 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  VTYN ++D   KKG      ++LS M+     PN  TYN L+ G+C+   + +A
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKA 433

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M ++  M + K  P+V TYN+LI+G C  G L  A++L   M    L+PD  TY+  I+ 
Sbjct: 434 MSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDT 493

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA  L + L E GIK N V ++ +I  YCK GK+     ++  M   G  P+
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPN 553

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN+LID  CK  N +EA  ++D+M ++ ++    T   ++  L  + + D+A+ + +
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFD 613

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G + D   Y   I  Y    +   A  L  +M  + IMP T  Y   I    + G
Sbjct: 614 QMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFG 673

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIH---------------------GFCSEG---- 339
             + A  +L  + + G  P   T++ +I                      G  S      
Sbjct: 674 SIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNC 733

Query: 340 ----QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                 E  L    KM E    P+  T    ++GLC+ G LE A + F     KG++ + 
Sbjct: 734 WRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNE 793

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTS 454
             YN+L+   C+     +A   L  M E +  P   +   +   L + G  E+A++ F S
Sbjct: 794 DIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCS 853

Query: 455 IM 456
            +
Sbjct: 854 FL 855



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 202/431 (46%), Gaps = 10/431 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD  TY+  +D L K+G + E R L   +K++G+  N   Y+ L+ GYCK+G + + 
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++D M     +P+  TYN LI+G+C     +EA  L   M    + P   TY  LI+ 
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +     +A  + D++   G  P+   +   I  YC  G++  A  ++  M   G  PD
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + Y   IDA  + G+++ AF ++  M   G + +  T + ++  L   K  + +     
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSEL 718

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S    G   ++ S        +R       L L+ +M E    P+  TY   I GL + G
Sbjct: 719 SDLSSGVASNDFS------NCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVG 772

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E A  + + + + G  P+E  +N+++   C  G   +A+++ + M+E    P + +C 
Sbjct: 773 CLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCK 832

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE---RRLEDAFGLLSEM 421
           +LL GL  EG  EKA + F S++      D + +  LI  L K+    +  D FG++ E 
Sbjct: 833 LLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIM-ET 891

Query: 422 EEKKLGPDRYT 432
           +  ++ P  Y+
Sbjct: 892 QGCQIHPKTYS 902



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 24/333 (7%)

Query: 205 FRMMDVMGRKGLKM-------NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           F M+D M    L+M       N  TLNT+++  C    + EA + ++   + G  LD  +
Sbjct: 182 FLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFT 241

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y +LI GY R++  + A  ++  M  +  + +  +Y  +I G  ++ + ++A+ + +++ 
Sbjct: 242 YTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMH 301

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           +    P   T+  II   C  G+  +AL    +M EK  +P++ T  +L+  LC +   +
Sbjct: 302 EDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFD 361

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
            A K     + KG     VTYN LI   CK+     A  +LS ME     P+  TY  + 
Sbjct: 362 DAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
                   + +A      M+E                  ++ P+ ++Y+  I+  C +G 
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLE-----------------RKLQPNVVTYNILIHGQCKEGD 464

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              A ++     + G+  ++ TY   ++ L KR
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKR 497



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           DL   M + G  PN  TY   ++G CK+G L+ A R+ D M +    P+   YN L+   
Sbjct: 744 DLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCS 803

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C  G+  EA R    M   + LP + +   L+   ++ G   +A ++     +     + 
Sbjct: 804 CQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDE 863

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
           +   ++I    K+G  DK   +   ME  G      TY+ LI+ 
Sbjct: 864 MVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEG 907


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/417 (32%), Positives = 211/417 (50%), Gaps = 3/417 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D   YNT++  L K  K     +LL  M   G   +  TY  L+ G CK G L  A  ++
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      P+V TY  LI+G C A    +A +  K M      PD+VTYN+LI+    +
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 129 GRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            R  +A  ++ EL  E G  P+ VT+N  I   CK GK+DK  +++  M+  G SPD VT
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           + ++I   CKA  +++AF++   M  +G   +++T + +L  L    +LD    +L    
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G+Y    +Y  LI    R      A   +++  E   +   +T+NA I  L +SGK  
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVTCNIL 366
            A ++L  +++SG +P+  ++N +I G C  G V+ A +   KM++    KPD++  N L
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 368

Query: 367 LSGLCREGILEKALKFFRSWILKGKAV-DSVTYNTLISSLCKERRLEDAFGLLSEME 422
           +SG C+ G L +A +  +    K   V D VTYNT+I    K   L+ A  LL EM+
Sbjct: 369 ISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 194/441 (43%), Gaps = 54/441 (12%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M S     D   YNTLI    ++ +   A +L+  +  +G   + VT+  +I   CK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +D A  +++ M + G +P+ VTY  LID  CKA    +A + +  M R G + + +T N+
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++H LC   ++D+A                                   L L + M E  
Sbjct: 121 LIHGLCMANRMDDA----------------------------------GLVLQELMIESG 146

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
            +P   TYN  I GL ++GK ++ ++ML E+ + G+ PD  TF +II G C   +++ A 
Sbjct: 147 RIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAF 206

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           Q    M+E+   PD +T +I+L  L R   L+   +     +  G    S TY  LI +L
Sbjct: 207 QVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHAL 266

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK---- 461
            +   +E A     +  E     + YT+ A   AL  SG+   A+     M+E+G     
Sbjct: 267 IRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNL 326

Query: 462 INHQVVQPNTSKTPEEID---------------PSSISYSEKINEHCSQGRYKDALQIFE 506
           +++  V     K+    D               P  I ++  I+  C  GR   A Q+ +
Sbjct: 327 LSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLK 386

Query: 507 ETRQKGIAI-NKSTYMNLMNG 526
           E + K I + +  TY  +++G
Sbjct: 387 EMKAKNICVPDVVTYNTMIDG 407



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 186/382 (48%), Gaps = 38/382 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+ VTY  ++D L K  + ++    +  M + G  P+  TYN L+ G C    
Sbjct: 71  MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANR 130

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           + +A  V+ +LM ++  +PDV TYN  I+G C AG L++   + +EM+   + PDVVT+ 
Sbjct: 131 MDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFC 190

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           ++I+   ++ R  +AF++   + E G  P+++T++IM+    +  ++D   +++ +M ++
Sbjct: 191 SIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G      TY  LI A  +AG++E A    +     G  M   T N  +  LC        
Sbjct: 251 GHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALC-------- 302

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
                                      R  K   A  +   M E   +P+  +YN +I G
Sbjct: 303 ---------------------------RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDG 335

Query: 300 LSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF-K 357
           L +SG  + A  +  ++L SG   PD   FNT+I GFC  G++ +A Q   +M  K+   
Sbjct: 336 LCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICV 395

Query: 358 PDIVTCNILLSGLCREGILEKA 379
           PD+VT N ++ G  + G L++A
Sbjct: 396 PDVVTYNTMIDGQSKFGSLKQA 417



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 171/375 (45%), Gaps = 22/375 (5%)

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M    F  D   YNTLI   CKA     A  ++ VM   G   + +T  T++  LC    
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           LD A  LL   +  G   + V+Y  LI G  +  + + A++    M      P   TYN+
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 296 MIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           +I GL  + + + A  +L EL+ +SG IPD  T+NT I G C  G+++K L+   +M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              PD+VT   ++SGLC+   ++ A + F+  + +G   DS+TY+ ++ +L +  RL+  
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN---- 470
             +L  M +        TYA +  AL+ +G +E A       +E G +  +V   N    
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCV-MEVYTHNAFIG 299

Query: 471 ----TSKTPEEID-----------PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
               + K P   +           P+ +SY+  I+  C  G   DA ++  +    G   
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 359

Query: 516 NKSTYMN-LMNGLIK 529
               + N L++G  K
Sbjct: 360 PDVIFFNTLISGFCK 374



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M  +  +++    NT++  LC  +K   A  LL+  +  GY    V+Y TLI G  +   
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + A  L  +M +    P+  TY A+I GL ++ +   AI  +  +L+SG  PD  T+N+
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 331 IIHGFCSEGQVEKA-LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           +IHG C   +++ A L     M+E    PD+VT N  +SGLC+ G L+K L+        
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G + D VT+ ++IS LCK  R++DAF +   M E+   PD  TY+ +   L  + RL+  
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           ++    MV++G   H  +              S +Y+  I+     G  + A   +E+  
Sbjct: 241 EEVLEHMVKSG---HYAL--------------SATYAPLIHALIRAGDIESASWAYEQAM 283

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
           + G  +   T+   +  L +  K
Sbjct: 284 EAGCVMEVYTHNAFIGALCRSGK 306



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 35/317 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTYNT +  L K GKL++  ++L +M + G+ P+  T+  ++SG CK   + +A
Sbjct: 146 GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDA 205

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V   M +   +PD  TY+++++    A  L+    + + M          TY  LI+ 
Sbjct: 206 FQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHA 265

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +G    A    ++  E G      THN  I   C+ GK   A  I+  M E+G  P+
Sbjct: 266 LIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPN 325

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++YN +ID  CK+GN+++A++    + RK           +L + CC+           
Sbjct: 326 LLSYNFVIDGLCKSGNVDDAWK----LSRK-----------MLDSGCCKP---------- 360

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI-MPSTFTYNAMIWGLSQS 303
                    D + + TLI+G+ +  + ++A +L  EMK + I +P   TYN MI G S+ 
Sbjct: 361 ---------DVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKF 411

Query: 304 GKTEQAIDMLNELLQSG 320
           G  +QA  +L E+   G
Sbjct: 412 GSLKQAKLLLEEMQAVG 428


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 219/464 (47%), Gaps = 40/464 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN +L AL K  +++    LL +M  +G  P+  +Y  L+S  CKLG +KEA
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +    T     P V  YN LING C     EEAF+L  EM +  + P+V++Y T+IN 
Sbjct: 236 RELAMSFT-----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 125 -----------------------------------FFESGRSMEAFKLIDELDEHGIKPN 149
                                              FF  G S EA    D +   G+ PN
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            V +N ++   C +  +  A  +   ME NG  P+  TY+ LID   KAG+++ A  + +
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G   N +    ++  LC     ++AY L+ +        + V++ T I G     
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           + + A+K++D+M      P+T TYN ++  L +  +  +A  ++ ++   G+  +  T+N
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           TII+G+C  G + +AL+   KMV +  KPD +T NI++   C++G +  A++        
Sbjct: 531 TIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAG 590

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
               D + Y +LIS +C    +E+A   L  M  + + P+  T+
Sbjct: 591 KWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 252/552 (45%), Gaps = 57/552 (10%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           +TY  +++ L  + +++ V+ LL  MK +G+  +   +  ++  Y + G  ++A++    
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M   +  P V  YN +++   +    +    +   M+   + P+V TYN L+    ++ R
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A KL+ E+   G  P+ V++  +I   CK GK+ +A ++  +     F+P    YN 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS-----FTPSVPVYNA 251

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  CK    EEAF+++D M  KG+  N I+  TI++ L     ++ +  +L     RG
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +  ++ +LI G+F    ++ AL  WD M    ++P+   YNA++ GL        A+
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV--TC----- 363
            + N++  +G  P+  T++ +I G+   G ++ A +  N M+     P++V  TC     
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431

Query: 364 ----------------------------NILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                                       N  + GLC  G ++ A+K F      G   ++
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            TYN L+ SL K+RR  +AFGL+ +ME + +  +  TY  I      +G L EA +    
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           MV  G                   P +I+ +  I+ +C QG+   A+Q+ +         
Sbjct: 552 MVVRGT-----------------KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594

Query: 516 NKSTYMNLMNGL 527
           +   Y +L++G+
Sbjct: 595 DIIAYTSLISGI 606



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 209/440 (47%), Gaps = 40/440 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD V+Y T++ +L K GK+ E R+L          P+   YN L++G CK   
Sbjct: 207 MSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYT 261

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE----------------------- 97
            +EA +++D M      P+V +Y  +IN   +AG +E                       
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321

Query: 98  ------------EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                       EA      M    ++P+VV YN L++         +A  + ++++ +G
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             PN  T++ +I  Y K G +D A ++   M  +G  P+ V Y  ++D  C+     +A+
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +++ M  +    NT+T NT +  LC   ++D A  + +     G + +  +Y  L+   
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +D +   A  L  +M+ R I  +  TYN +I+G   +G   +A+++L +++  G  PD 
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T N +I  +C +G+V  A+Q  +++    + PDI+    L+SG+C    +E+A+ + R 
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRR 621

Query: 386 WILKGKAVDSVTYNTLISSL 405
            + +G + +  T+N L+  L
Sbjct: 622 MLSEGISPNVATWNVLVRHL 641



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 197/390 (50%), Gaps = 1/390 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++Y TI++AL   G +     +L+ M  +G  PN  T+  L+ G+   G   EA
Sbjct: 276 GIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +   D M +   +P+V  YN L++G C+   L +A  +  +ME     P+V TY+ LI+ 
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + ++G    A ++ + +  HG  PN V +  M+   C+    ++A  ++ NM+     P+
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VT+NT I   C +G ++ A ++ D MG  G   NT T N +L +L  +++  EA+ L+ 
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG  L+ V+Y T+I GY        AL+L  +M  R   P   T N +I    + G
Sbjct: 516 DMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQG 575

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K   AI +++ L      PD   + ++I G C+   VE+A+ +  +M+ +   P++ T N
Sbjct: 576 KVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWN 635

Query: 365 ILLSGLCREGILEKALKFF-RSWILKGKAV 393
           +L+  L        A++F   S I++ K V
Sbjct: 636 VLVRHLFSNMGHSGAVQFLDASSIMQPKFV 665



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 207/460 (45%), Gaps = 39/460 (8%)

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK-LIDELDEHGIKPNAVTHNIM 156
           E F+     +S K  P  +TY  +I +   S R M+  + L+ ++   GI  +      +
Sbjct: 61  EYFKSIANSKSFKHTP--LTYQMMIEKL-ASEREMDCVQYLLQQMKLEGISCSEDLFISV 117

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           I  Y + G  ++A K    M++    P    YN ++DA       +    +   M + G+
Sbjct: 118 IGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGM 177

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + N  T N +L  LC   ++D A+ LL   S +G   DEVSY TLI+   +  K   A +
Sbjct: 178 EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE 237

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L          PS   YNA+I G+ +    E+A  +L+E++  G+ P+  ++ TII+   
Sbjct: 238 L-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G VE +L    KM  +   P++ T   L+ G   +G   +AL F+   I +G   + V
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
            YN L+  LC +R L DA  + ++ME     P+  TY+A+     ++G L+ A +  + M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412

Query: 457 VETGKINHQVVQPNTSKTPEEID------------------------PSSISYSEKINEH 492
           +  G        PN       +D                        P++++++  I   
Sbjct: 413 ITHG------CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           C  GR   A+++F++    G   N +TY  L++ L+K R+
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 136/279 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  TY+ ++D   K G L+   ++ + M   G  PN   Y  +V   C+   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +++ M      P+  T+N  I G C +G ++ A ++  +M +    P+  TYN 
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   +  R  EAF L+ +++  GI+ N VT+N +I  YC  G + +A +++  M   G
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +T N +IDA CK G +  A ++MD +       + I   +++  +C    ++EA 
Sbjct: 557 TKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAI 616

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
           + L      G   +  ++  L+   F +   + A++  D
Sbjct: 617 VYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 242/523 (46%), Gaps = 17/523 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VTY  ++      G LN     L  + K GL  N  ++  ++   C      +AM +
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 68  VDLMTQN-KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   T      PDV++Y +L+ G C+    EEA  L   M  +     P+VV+Y T+I+ 
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+     +A+ L  E+ + GI P+ VT N +I   CK   +DKA +++R M +    PD
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+L+     +G ++EA R++  M R G   N +T + ++  LC      EA  +LN
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  +     +  +YG L+ GY           L D M +  + P    +N  I+   + G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A+   N++ Q G++PD  ++ T+I G C  G+++ A+    +M++    PDIV   
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G    G  EKA + F   + +G     V + T+I  L KE ++ +A  L   M   
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIA 430

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID----- 479
            + P+  +Y AI      +G+L+E  K    M+  G      ++PN       +D     
Sbjct: 431 SVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVG------LKPNAVTFNTLLDDMLSM 484

Query: 480 ---PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
              P   + +  I+  C  GR +D L +F E   K    +  T
Sbjct: 485 GLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVT 527



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 202/397 (50%), Gaps = 16/397 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD VT N+I+D L K   +++  ++L  M  + ++P+ TTYN LV GY   G LKEA
Sbjct: 151 GIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEA 210

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R++  M+++   P+  TY+MLI+  C  G   EA  +   M   +  P+V TY  L++ 
Sbjct: 211 VRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHG 270

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +   G  +E   LID + ++G++P+    NI I  Y K G++D+A      M + G  PD
Sbjct: 271 YATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPD 330

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            ++Y T+ID  CK G ++ A      M   GL  + +    ++H      K ++A  L  
Sbjct: 331 IISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFY 390

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               RG     V + T+I   F++ K   A  L+D M    + P+  +YNA+I G   +G
Sbjct: 391 EMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAG 450

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K ++ + +L+++L  G+ P+  TFNT++                + M+    KPD+ TCN
Sbjct: 451 KLDEVLKLLDDMLSVGLKPNAVTFNTLL----------------DDMLSMGLKPDVATCN 494

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
            L+   C +G +E  L  FR  + K    D+VT N +
Sbjct: 495 TLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 221/450 (49%), Gaps = 21/450 (4%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWL 61
            GC PD  +Y  +L  L  + K  E  DL+  M + G    PN  +Y  ++ G+ K   +
Sbjct: 78  LGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEV 137

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  +   M      PDV T N +I+G C    +++A  + ++M    ++PD  TYN+L
Sbjct: 138 GKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSL 197

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++ +  SG+  EA +++ ++  HG  PN VT++++I   CK G   +A +I+ +M ++  
Sbjct: 198 VHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRG 257

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +P+  TY  L+      G++ E   ++D+M + G++ +    N  ++      +LDEA +
Sbjct: 258 NPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAML 317

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
             N   ++G   D +SYGT+I G  +  + + A+  + +M +  + P    +  +I G S
Sbjct: 318 TFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFS 377

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
             GK E+A ++  E++  G+ P    F T+I     EG+V +A    + M   S KP++V
Sbjct: 378 MYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVV 437

Query: 362 TCNILLSGLCREGILEKALKFFRSWI---LKGKAV----------------DSVTYNTLI 402
           + N ++ G    G L++ LK     +   LK  AV                D  T NTLI
Sbjct: 438 SYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLI 497

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            S C++ R+ED   L  EM  K    D  T
Sbjct: 498 DSCCEDGRIEDVLTLFREMLSKAAKTDTVT 527



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 197/428 (46%), Gaps = 20/428 (4%)

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           S K+ P  VTY  LI+     G    AF  + ++ + G++ NA++   +++  C E +  
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 168 KACKIV-RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLN 224
            A  IV R   + G +PD  +Y  L+   C     EEA  ++ +M   G     N ++  
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
           T++H    E ++ +AY L      RG   D V+  ++I G  + +  ++A ++  +M ++
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
            IMP   TYN+++ G   SG+ ++A+ +L ++ + G  P+  T++ +I   C  G   +A
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEA 245

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +  N M++    P++ T   LL G   +G L +        +  G   D   +N  I +
Sbjct: 246 REILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYA 305

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
             K  RL++A    ++M ++ L PD  +Y  +   L + GRL+ A      M++ G    
Sbjct: 306 YVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDG---- 361

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                        + P  + ++  I+     G+++ A ++F E   +GI      +  ++
Sbjct: 362 -------------LSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMI 408

Query: 525 NGLIKRRK 532
           + L K  K
Sbjct: 409 DKLFKEGK 416



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 153/331 (46%), Gaps = 16/331 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ VTY+ ++D L K G   E R++L+ M +    PN  TY  L+ GY   G 
Sbjct: 217 MSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGD 276

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM QN   PD   +N+ I  +   G L+EA     +M    L+PD+++Y T
Sbjct: 277 LVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGT 336

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   + GR   A     ++ + G+ P+ V    +I  +   GK +KA ++   M + G
Sbjct: 337 MIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRG 396

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  V + T+ID   K G + EA  + D+M    +K N ++ N I+H      KLDE  
Sbjct: 397 IRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVL 456

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+     G   + V++ TL+                D+M    + P   T N +I   
Sbjct: 457 KLLDDMLSVGLKPNAVTFNTLL----------------DDMLSMGLKPDVATCNTLIDSC 500

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            + G+ E  + +  E+L      D  T N I
Sbjct: 501 CEDGRIEDVLTLFREMLSKAAKTDTVTENII 531


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 232/474 (48%), Gaps = 33/474 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD+ +Y  ++   F+ GK+ E    L+ M ++G +P+  T  ++++  C+ G +  A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +     M      P++  +  LI+G C  G +++AF + +EM      P+V T+  LI+ 
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331

Query: 125 FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + G + +AF+L  +L      KPN  T+  MI  YCKE K+++A  +   M+E G  P
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +  TY TLI+ +CKAG+   A+ +M++MG +G   N  T N  + +LC + +  EAY LL
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N A   G   D V+Y  LI    +    N+AL  +  M +          N +I    + 
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            K +++  +   ++  G+IP + T+ ++I  +C EG ++ AL++ + M      PD  T 
Sbjct: 512 KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 571

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSV--------------------------- 396
             L+SGLC++ ++++A K + + I +G +   V                           
Sbjct: 572 GSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 631

Query: 397 -----TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                T  TL+  LC E+++  A     ++ EK    DR T AA  TA  ESG+
Sbjct: 632 KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 241/489 (49%), Gaps = 18/489 (3%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           G+LNE   ++ DM+ QGL P+  T N ++    +LG ++ A  V D M+    +PD  +Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +++ G    G ++EA R    M     +PD  T   ++    E+G    A     ++ +
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G KPN +    +I   CK+G I +A +++  M  NG+ P+  T+  LID  CK G  E+
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340

Query: 204 AFRMMDVMGRKG-LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           AFR+   + R    K N  T  +++   C E KL+ A ML +   ++G + +  +Y TLI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G+ +     RA +L + M +   MP+ +TYNA I  L +  +  +A ++LN+    G+ 
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            D  T+  +I   C +  + +AL F  +M +  F+ D+   NIL++  CR+  ++++ + 
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F+  +  G      TY ++IS  CKE  ++ A      M+     PD +TY ++ + L +
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
              ++EA K    M++ G             +P E+   +++Y     E+C +    +A+
Sbjct: 581 KSMVDEACKLYEAMIDRG------------LSPPEVTRVTLAY-----EYCKRNDSANAM 623

Query: 503 QIFEETRQK 511
            + E   +K
Sbjct: 624 ILLEPLDKK 632



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 134/332 (40%), Gaps = 67/332 (20%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY +++    K+ KLN    L S MK+QGL PN  TY  L++G+CK G    A  +
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY--------- 118
           ++LM     +P+++TYN  I+  C      EA+ L  +  S  L  D VTY         
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475

Query: 119 --------------------------NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
                                     N LI  F    +  E+ +L   +   G+ P   T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +  MI  YCKEG ID A K   NM+ +G  PD  TY +LI   CK   ++EA ++ + M 
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 595

Query: 213 RKGL--------------------------------KMNTITLNTILHTLCCEKKLDEAY 240
            +GL                                K+   T+ T++  LC EKK+  A 
Sbjct: 596 DRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAA 655

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           +      ++    D V+     T      K N
Sbjct: 656 LFFQKLLEKDSSADRVTLAAFTTACSESGKNN 687



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           M+  GC+PD+ TY +++  L KK  ++E   L   M  +GL P   T   L   YCK
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 219/427 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + +  +L  + K  + + V  L   M+  G+ P   T NI++   C       A  
Sbjct: 80  LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M +    PD+ T+  L+NG+C+   +E+A  L  ++  +   P+VVTY TLI    
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++     A +L +++  +G +PN VT+N ++   C+ G+   A  ++R+M +    P+ +
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T+  LIDA  K G + EA  + +VM +  +  +  T  ++++ LC    LDEA  +    
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G Y +EV Y TLI G+ + ++    +K++ EM ++ ++ +T TY  +I G    G+ 
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A ++ N++      PD  T+N ++ G C  G+VEKAL     M ++    +IVT  I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G+C+ G +E A   F S   KG   + +TY T+IS  C+   + +A  L  +M+E   
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499

Query: 427 GPDRYTY 433
            P+   Y
Sbjct: 500 LPNESVY 506



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 215/456 (47%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           +Y  IL       + N+  DL + M     +P+   +  L+S   K+      + + + M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
                 P + T N++++  C +     A     +M  L   PD+VT+ +L+N +    R 
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            +A  L D++   G KPN VT+  +I+  CK   ++ A ++   M  NG  P+ VTYN L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +   C+ G   +A  ++  M ++ ++ N IT   ++       KL EA  L N   +   
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           Y D  +YG+LI G       + A +++  M+     P+   Y  +I G  +S + E  + 
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +  E+ Q G++ +  T+  +I G+C  G+ + A +  N+M  +   PDI T N+LL GLC
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
             G +EKAL  F     +   ++ VTY  +I  +CK  ++EDAF L   +  K + P+  
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           TY  + +     G + EA      M E G + ++ V
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 183/359 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VT+ ++L+      ++ +   L   +   G  PN  TY  L+   CK   
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ + + M  N S P+V TYN L+ G C  G   +A  L ++M   ++ P+V+T+  
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G+ MEA +L + + +  + P+  T+  +I   C  G +D+A ++   ME NG
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V Y TLI   CK+  +E+  ++   M +KG+  NTIT   ++   C   + D A 
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N  S R    D  +Y  L+ G   + K  +AL +++ M++R++  +  TY  +I G+
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            + GK E A D+   L   GM P+  T+ T+I GFC  G + +A     KM E  F P+
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 192/384 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P   T N ++  +    +       L  M K G  P+  T+  L++GYC    
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A+ + D +      P+V TY  LI   C    L  A  L  +M +    P+VVTYN 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    E GR  +A  L+ ++ +  I+PN +T   +I  + K GK+ +A ++   M +  
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY +LI+  C  G ++EA +M  +M R G   N +   T++H  C  K++++  
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +    S++G   + ++Y  LI GY    + + A +++++M  R+  P   TYN ++ GL
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +GK E+A+ +   + +  M  +  T+  II G C  G+VE A      +  K  KP++
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468

Query: 361 VTCNILLSGLCREGILEKALKFFR 384
           +T   ++SG CR G++ +A   F+
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFK 492



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 214/460 (46%), Gaps = 17/460 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ +   M  ++ LP +  +  L++        +    L ++M+ L + P + T N 
Sbjct: 64  FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++    S +   A   + ++ + G +P+ VT   ++  YC   +I+ A  +   +   G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F P+ VTY TLI   CK  ++  A  + + MG  G + N +T N ++  LC   +  +A 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    KR    + +++  LI  + +  K   A +L++ M +  + P  FTY ++I GL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  ++A  M   + ++G  P+E  + T+IHGFC   +VE  ++   +M +K    + 
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T  +L+ G C  G  + A + F     +    D  TYN L+  LC   ++E A  +   
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M ++++  +  TY  I   + + G++E+A      +   G                 + P
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG-----------------MKP 466

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           + I+Y+  I+  C +G   +A  +F++ ++ G   N+S Y
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 199/435 (45%), Gaps = 17/435 (3%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
             +A  L   M   + LP ++ +  L++   +  R      L +++   GI P   T NI
Sbjct: 64  FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++   C   +  +A   +  M + GF PD VT+ +L++  C    +E+A  + D +   G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            K N +T  T++  LC  + L+ A  L N     G   + V+Y  L+TG     +   A 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L  +M +R+I P+  T+ A+I    + GK  +A ++ N ++Q  + PD  T+ ++I+G 
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G +++A Q    M      P+ V    L+ G C+   +E  +K F     KG   ++
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           +TY  LI   C   R + A  + ++M  ++  PD  TY  +   L  +G++E+A      
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M +                  E+D + ++Y+  I   C  G+ +DA  +F     KG+  
Sbjct: 424 MRK-----------------REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466

Query: 516 NKSTYMNLMNGLIKR 530
           N  TY  +++G  +R
Sbjct: 467 NVITYTTMISGFCRR 481



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 158/289 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTYN ++  L + G+  +   LL DM K+ + PN  T+  L+  + K+G L EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + ++M Q    PDV+TY  LING C  G+L+EA ++   ME     P+ V Y TLI+ 
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +S R  +  K+  E+ + G+  N +T+ ++I+ YC  G+ D A ++   M      PD
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN L+D  C  G +E+A  + + M ++ + +N +T   I+  +C   K+++A+ L  
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           S   +G   + ++Y T+I+G+ R    + A  L+ +MKE   +P+   Y
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 160/326 (49%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  P+ VTY T++  L K   LN   +L + M   G  PN  TYN LV+G C++G   
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A  ++  M + +  P+V T+  LI+ +   G L EA  L   M  + + PDV TY +LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N     G   EA ++   ++ +G  PN V +  +I  +CK  +++   KI   M + G  
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            + +TY  LI   C  G  + A  + + M  +    +  T N +L  LCC  K+++A M+
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                KR   ++ V+Y  +I G  +  K   A  L+  +  + + P+  TY  MI G  +
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTF 328
            G   +A  +  ++ + G +P+E+ +
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVY 506



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 44/225 (19%), Positives = 79/225 (35%), Gaps = 52/225 (23%)

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF---------------- 383
           Q   AL    +MV     P I+    LLS + +    +  +  F                
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 384 -------------RSWILKGKAV------DSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
                        R+    GK +      D VT+ +L++  C   R+EDA  L  ++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P+  TY  +   L ++  L  A +  + M   G                   P+ ++
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-----------------RPNVVT 225

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           Y+  +   C  GR+ DA  +  +  ++ I  N  T+  L++  +K
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 221/406 (54%), Gaps = 1/406 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+   ++ + ++D   K G++++ R LL +M + G+  N   YN L+  Y +       
Sbjct: 129 GCI-TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+  M      P V TY +L++G   AG + +   +  E++   +  DV  Y+ +IN 
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +  +G    A ++ DE   +GI+PN  T+  +I  +CK G+I+ A  ++ +M+  G   +
Sbjct: 248 YCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHN 307

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + +NT+ID  C+ G +++A  +  VM R G++++  T NT+   LC   ++++A  LL+
Sbjct: 308 QIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH 367

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   + VSY TLI+ + ++     A +L+ +M+ +   PS  TYN MI G  +SG
Sbjct: 368 IMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSG 427

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A     E+ + G++PD  T+  ++HG C  G+V+ AL+   +M ++  KP++V   
Sbjct: 428 SIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYT 487

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
            L+SGL +EG  E+A +F+ + +  G   D   Y+ L+ SL  ++R
Sbjct: 488 ALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKR 533



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 177/332 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P   TY  ++D L   G +++V  +  ++K++ +  +   Y+ +++ YC+ G 
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  V D    N   P+  TY  LING+C  G +E A  L  +M+   +  + + +NT
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ +   G   +A ++   ++  GI+ +  T+N +    C+  +++ A K++  M ENG
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + V+Y TLI  + K G+M EA R+   M  KG + + +T N ++        + EA 
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                  K+G   D  +Y  L+ G+  + K + AL+L++EMK+R   P+   Y A+I GL
Sbjct: 434 RFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGL 493

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
           ++ G++E+A    + +L +G+ PD+T ++ ++
Sbjct: 494 AKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 189/380 (49%)

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
            + +++++G+C AG +++A RL  EM    +  +   YN L++ +          +++ E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           ++  G++P   T+ I++      G I K   +   ++    + D   Y+ +I+A C+AGN
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           +  A  + D     G++ N  T   +++  C   +++ A MLL     RG   +++ + T
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           +I GY R    ++AL++   M+   I    +TYN +  GL +  + E A  +L+ + ++G
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +  +  ++ T+I     EG + +A +    M  K  +P +VT N+++ G  + G + +A 
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +F +    KG   D  TY  L+   C   +++ A  L  EM+++   P+   Y A+ + L
Sbjct: 434 RFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGL 493

Query: 441 VESGRLEEAQKFTSIMVETG 460
            + GR EEA +F   M+  G
Sbjct: 494 AKEGRSEEAFQFYDNMLAAG 513



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 224/481 (46%), Gaps = 18/481 (3%)

Query: 48  YNILVSGYCKLGWLKEAMRVVDL-MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           +++L   Y   G    A   +DL +++  SL      + L++      +L  A  LRK +
Sbjct: 65  HDMLFRAYADAGAPDRAAEALDLTVSRLGSLDPRSLTSSLLSLRRTGHLLPAAELLRKAL 124

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
            S       ++ + +++ F ++GR  +A +L+DE+  HG+K NA  +N ++  Y ++   
Sbjct: 125 ASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKND 184

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            +  ++++ ME  G  P   TY  L+D    AG++ +   + D + RK +  +    + +
Sbjct: 185 ARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAV 244

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           ++  C    +  A  + +     G   +E +YG LI G+ +  +   A  L  +M+ R +
Sbjct: 245 INAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGV 304

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
             +   +N MI G  + G  ++A+++   + + G+  D  T+NT+  G C   ++E A +
Sbjct: 305 GHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKK 364

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             + M E   + + V+   L+S   +EG + +A + FR    KG     VTYN +I    
Sbjct: 365 LLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYI 424

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           K   + +A     EME+K L PD YTYAA+      +G+++ A +    M + G      
Sbjct: 425 KSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGA----- 479

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                        P+ ++Y+  I+    +GR ++A Q ++     G+  + + Y  L+  
Sbjct: 480 ------------KPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGS 527

Query: 527 L 527
           L
Sbjct: 528 L 528



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 177/383 (46%), Gaps = 17/383 (4%)

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           ++ ++++  +CK G++D A +++  M  +G   +   YN L+D   +  N      ++  
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M   G++    T   ++  L     + +   + +   ++    D   Y  +I  Y R   
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
             RA +++DE     I P+  TY A+I G  + G+ E A  +L ++   G+  ++  FNT
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I G+C  G V+KAL+    M     + D+ T N L  GLCR   +E A K        G
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              + V+Y TLIS   KE  + +A  L  +ME K   P   TY  +    ++SG + EA+
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           +F   M + G +                 P   +Y+  ++ HC  G+   AL++FEE +Q
Sbjct: 434 RFKKEMEKKGLV-----------------PDVYTYAALVHGHCVNGKVDVALRLFEEMKQ 476

Query: 511 KGIAINKSTYMNLMNGLIKRRKS 533
           +G   N   Y  L++GL K  +S
Sbjct: 477 RGAKPNVVAYTALISGLAKEGRS 499



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 141/268 (52%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  P+  TY  +++   K G++     LL+DM+ +G+  N+  +N ++ GYC+ G + 
Sbjct: 266 GNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVD 325

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A+ +  +M +     DV+TYN L  G C    +E+A +L   M    +  + V+Y TLI
Sbjct: 326 KALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLI 385

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   + G  +EA +L  +++  G +P+ VT+N+MI  Y K G I +A +  + ME+ G  
Sbjct: 386 SIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLV 445

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD  TY  L+  +C  G ++ A R+ + M ++G K N +    ++  L  E + +EA+  
Sbjct: 446 PDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQF 505

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEK 270
            ++    G   D+  Y  L+     D++
Sbjct: 506 YDNMLAAGLTPDDTLYSMLVGSLHTDKR 533



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 68/133 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  P  VTYN ++D   K G + E      +M+K+GLVP+  TY  LV G+C  G 
Sbjct: 404 MEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGK 463

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+R+ + M Q  + P+V  Y  LI+G    G  EEAF+    M +  L PD   Y+ 
Sbjct: 464 VDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSM 523

Query: 121 LINRFFESGRSME 133
           L+       R  E
Sbjct: 524 LVGSLHTDKRKDE 536


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 232/474 (48%), Gaps = 33/474 (6%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G +PD+ +Y  ++   F+ GK+ E    L+ M ++G +P+  T  ++++  C+ G +  A
Sbjct: 813  GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 872

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +     M      P++  +  LI+G C  G +++AF + +EM      P+V T+  LI+ 
Sbjct: 873  IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 932

Query: 125  FFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G + +AF+L  +L      KPN  T+  MI  YCKE K+++A  +   M+E G  P
Sbjct: 933  LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 992

Query: 184  DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            +  TY TLI+ +CKAG+   A+ +M++MG +G   N  T N  + +LC + +  EAY LL
Sbjct: 993  NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 1052

Query: 244  NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
            N A   G   D V+Y  LI    +    N+AL  +  M +          N +I    + 
Sbjct: 1053 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 1112

Query: 304  GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
             K +++  +   ++  G+IP + T+ ++I  +C EG ++ AL++ + M      PD  T 
Sbjct: 1113 KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 1172

Query: 364  NILLSGLCREGILEKALKFFRSWILKGKAVDSV--------------------------- 396
              L+SGLC++ ++++A K + + I +G +   V                           
Sbjct: 1173 GSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 1232

Query: 397  -----TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                 T  TL+  LC E+++  A     ++ EK    DR T AA  TA  ESG+
Sbjct: 1233 KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 1286



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 241/489 (49%), Gaps = 18/489 (3%)

Query: 24   GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
            G+LNE   ++ DM+ QGL P+  T N ++    +LG ++ A  V D M+    +PD  +Y
Sbjct: 762  GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821

Query: 84   NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
             +++ G    G ++EA R    M     +PD  T   ++    E+G    A     ++ +
Sbjct: 822  KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 881

Query: 144  HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             G KPN +    +I   CK+G I +A +++  M  NG+ P+  T+  LID  CK G  E+
Sbjct: 882  LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 941

Query: 204  AFRMMDVMGRKG-LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
            AFR+   + R    K N  T  +++   C E KL+ A ML +   ++G + +  +Y TLI
Sbjct: 942  AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 1001

Query: 263  TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
             G+ +     RA +L + M +   MP+ +TYNA I  L +  +  +A ++LN+    G+ 
Sbjct: 1002 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 1061

Query: 323  PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
             D  T+  +I   C +  + +AL F  +M +  F+ D+   NIL++  CR+  ++++ + 
Sbjct: 1062 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 1121

Query: 383  FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
            F+  +  G      TY ++IS  CKE  ++ A      M+     PD +TY ++ + L +
Sbjct: 1122 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 1181

Query: 443  SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
               ++EA K    M++ G             +P E+   +++Y     E+C +    +A+
Sbjct: 1182 KSMVDEACKLYEAMIDRG------------LSPPEVTRVTLAY-----EYCKRNDSANAM 1224

Query: 503  QIFEETRQK 511
             + E   +K
Sbjct: 1225 ILLEPLDKK 1233



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
            M+  GC+PD+ TY +++  L KK  ++E   L   M  +GL P   T   L   YCK
Sbjct: 1160 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 1216


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 256/551 (46%), Gaps = 36/551 (6%)

Query: 3   GF-GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           GF G  P   T N +L +L K  +++       +M    + PN  T+NIL++  C+ G  
Sbjct: 136 GFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKF 195

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           K A  ++  M +    P   TYN L+N +C  G  + A  L   M S  +  DV TYN L
Sbjct: 196 KSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVL 255

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+      RS + + ++  + ++ + PN +T+N +I    KEGKI  A K+   M     
Sbjct: 256 IDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNL 315

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ VTYNTLI  +C  GN+EEA R+ DVM   GL+ N +T   +L+ +    +      
Sbjct: 316 LPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSS 375

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L      G  +  +SY T+I G  ++     A++L D+M +  + P   T++ ++    
Sbjct: 376 VLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLV---- 431

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
                       N  L++G++P+    +T+I+ +C  G +++AL  +  M +     D  
Sbjct: 432 ------------NGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHF 479

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T ++L++  CR G LE+A  F       G A  SVT++ +I +         AF +  +M
Sbjct: 480 TSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKM 539

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKF----TSIMVETGKINHQVVQPNTSKTP-- 475
                 P ++TY  +   L+  G + EA+ F    +SI    G   +  +   TS++   
Sbjct: 540 NSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNL 599

Query: 476 ------------EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKG-IAINKSTYMN 522
                           P S +Y+  I   C +G+   AL +     +KG ++ N + Y +
Sbjct: 600 SNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTS 659

Query: 523 LMNGLIKRRKS 533
           L++GL+K   S
Sbjct: 660 LVDGLLKEGHS 670



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 149/594 (25%), Positives = 254/594 (42%), Gaps = 106/594 (17%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ +TYNT+++ L K+GK+     +  +M    L+PN  TYN L+ G+C  G ++EA+R+
Sbjct: 282 PNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRL 341

Query: 68  VDLMTQNKSLPDVWTYNMLING-----------------------------------WCN 92
            D+M  +   P+  TY  L+NG                                    C 
Sbjct: 342 CDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCK 401

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
            G+LEEA +L  +M  + + PD+VT++ L+N F ++G                + PN V 
Sbjct: 402 NGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTG----------------LVPNRVL 445

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           H+ +I  YCK G + +A      M ++G   D  T + L+ + C+ G +EEA   +D M 
Sbjct: 446 HSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMS 505

Query: 213 RKGLKMNTITLNTILHT-----------------------------------LCCEKKLD 237
           R GL  +++T + I+ T                                   L     ++
Sbjct: 506 RMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHIN 565

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA + ++  S   Y +    Y T++T   R    + A+ L DEM     +P +FTY ++I
Sbjct: 566 EAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLI 625

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMI-PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
            GL + GK   A+ +    ++ G++ P+   + +++ G   EG  + AL     M+ +  
Sbjct: 626 AGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGV 685

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +PD +  N+LL    R+G + K      +   +    +  TYN L+    K   +     
Sbjct: 686 QPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSK 745

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT-SIMVETGKINHQVVQPNTSKTP 475
           L +EM      PDR T+ ++     +SG L+ A KF   I VE  K++   +    SK  
Sbjct: 746 LYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKL- 804

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                            C +   K A  + ++    G+  N  TY +L NG ++
Sbjct: 805 -----------------CERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVR 841



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 213/422 (50%), Gaps = 2/422 (0%)

Query: 7    LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEAM 65
            +PD+ TY +++  L +KGK+     L     ++GL+ PN   Y  LV G  K G  K A+
Sbjct: 615  VPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAAL 674

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             + + M      PD   +N+L++ +   G + +   +   M S  L  ++ TYN L++ +
Sbjct: 675  YMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGY 734

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             +        KL +E+  HG  P+ +T + +I  YCK G +D A K +R +   GF  DC
Sbjct: 735  SKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDC 794

Query: 186  VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             T N L+   C+   ++ AF ++  +   G+  N  T N++ +        DEA  +L++
Sbjct: 795  FTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHA 854

Query: 246  ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              + GY      + TLI G  R      A++L DEMK   +       +A+I GL++S K
Sbjct: 855  LLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRK 914

Query: 306  TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            T++A  +L  +L+  +IP   TF T++H +C EG V KAL+  + M +   K D+   N+
Sbjct: 915  TDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNV 974

Query: 366  LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS-LCKERRLEDAFGLLSEMEEK 424
            L+SGLC +G ++ A K +     +    ++  Y  LI S LC    + ++  LL ++  +
Sbjct: 975  LISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTR 1034

Query: 425  KL 426
            +L
Sbjct: 1035 EL 1036



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 226/477 (47%), Gaps = 33/477 (6%)

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLR 103
           N   +++L+    +   + +A+    LM      P V+T NM++        ++  +   
Sbjct: 108 NPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFF 167

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           KEM + ++ P+V T+N L+N   E G+   A  L+ ++DE G  P AVT+N ++ WYCK+
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
           G+   A +++  M   G + D  TYN LID  C+     + + ++  M +  +  N IT 
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITY 287

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           NT+++ L  E K+  A  +    S      + V+Y TLI G+  +     AL+L D M  
Sbjct: 288 NTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVS 347

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
             + P+  TY A++ G+S+  +      +L  +   G+     ++ T+I G C  G +E+
Sbjct: 348 HGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEE 407

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A+Q  + M++ S  PDIVT ++L++G  + G++                 + V ++TLI 
Sbjct: 408 AVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVP----------------NRVLHSTLIY 451

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           + CK   L++A    + M +     D +T + +  +    GRLEEA+ F   M   G   
Sbjct: 452 NYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMG--- 508

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                         + PSS+++   I+ + + G    A  +F++    G   ++ TY
Sbjct: 509 --------------LAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTY 551



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 213/434 (49%), Gaps = 3/434 (0%)

Query: 13   YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
            YNT+L    + G L+    LL +M     VP+  TY  L++G C+ G +  A+ +     
Sbjct: 586  YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 645

Query: 73   QNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   L P+   Y  L++G    G  + A  + ++M +  + PD + +N L++R+   G+ 
Sbjct: 646  EKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKM 705

Query: 132  MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
             +   ++  +    +  N  T+NI++  Y K   + +  K+   M  +GF+PD +T+++L
Sbjct: 706  SKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSL 765

Query: 192  IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
            I   CK+G+++ A + +  +  +G K++  TLN ++  LC   ++  A+ L+   +  G 
Sbjct: 766  ILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGV 825

Query: 252  YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
              +  +Y +L  G+ R    + A  +   + E    P+   +  +I G+ + G  + A++
Sbjct: 826  TPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAME 885

Query: 312  MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
            + +E+   G+       + II G     + ++A +    M+E    P + T   L+   C
Sbjct: 886  LQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYC 945

Query: 372  REGILEKALKFFRSWILKGKA-VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            +EG + KAL+  RS + +    +D   YN LIS LC +  ++ AF L  EME++ + P+ 
Sbjct: 946  KEGNVAKALEL-RSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNT 1004

Query: 431  YTYAAIHTALVESG 444
              Y  +  + + +G
Sbjct: 1005 SIYIVLIDSFLCTG 1018



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 167/336 (49%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  PD + +N +LD   +KGK+++V D+LS M+ + L  N  TYNIL+ GY K   +   
Sbjct: 684  GVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARC 743

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++ + M  +   PD  T++ LI G+C +G L+ A +  +++       D  T N L+++
Sbjct: 744  SKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSK 803

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              E      AF L+ +L+  G+ PN  T+N +   + +    D+A  I+  + ENG++P 
Sbjct: 804  LCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPT 863

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            C  + TLI   C+ GN++ A  + D M   G+    + ++ I+  L   +K DEA  +L 
Sbjct: 864  CKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILG 923

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +        ++ TL+  Y ++    +AL+L   M++  +      YN +I GL   G
Sbjct: 924  IMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADG 983

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
              + A  +  E+ Q  + P+ + +  +I  F   G 
Sbjct: 984  DIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGN 1019



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/564 (21%), Positives = 231/564 (40%), Gaps = 53/564 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M   G + D+ T + ++ +  + G+L E    +  M + GL P+  T++ ++  Y   G 
Sbjct: 469  MNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGD 528

Query: 61   LKEAMRVVDLMTQNKSLPDVWTY-----------------------------------NM 85
              +A  V D M     LP  +TY                                   N 
Sbjct: 529  ALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNT 588

Query: 86   LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
            ++     +G L  A  L  EM     +PD  TY +LI      G+ + A  L     E G
Sbjct: 589  MLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKG 648

Query: 146  I-KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
            +  PN   +  ++    KEG    A  +  +M   G  PD + +N L+D   + G M + 
Sbjct: 649  LLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKV 708

Query: 205  FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
              ++  M  + L  N  T N +LH       +     L N     G+  D +++ +LI G
Sbjct: 709  NDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILG 768

Query: 265  YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
            Y +    + A+K   ++         FT N ++  L +  + + A D++ +L   G+ P+
Sbjct: 769  YCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPN 828

Query: 325  ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              T+N++ +GF      ++A    + ++E  + P       L+ G+CR G ++ A++   
Sbjct: 829  VDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQD 888

Query: 385  SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               + G +   V  + +I  L + R+ ++A  +L  M E ++ P   T+  +     + G
Sbjct: 889  EMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEG 948

Query: 445  RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
             + +A +  S+M +                   +     +Y+  I+  C+ G  + A ++
Sbjct: 949  NVAKALELRSVMEQC-----------------HVKLDVAAYNVLISGLCADGDIQAAFKL 991

Query: 505  FEETRQKGIAINKSTYMNLMNGLI 528
            +EE  Q+ I  N S Y+ L++  +
Sbjct: 992  YEEMEQRDIWPNTSIYIVLIDSFL 1015



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G     V  + I+  L +  K +E   +L  M +  ++P   T+  L+  YCK G 
Sbjct: 890  MKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGN 949

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + +A+ +  +M Q     DV  YN+LI+G C  G ++ AF+L +EME   + P+   Y  
Sbjct: 950  VAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIV 1009

Query: 121  LINRFFESGRSM-EAFKLIDEL 141
            LI+ F  +G  + E+ KL+ +L
Sbjct: 1010 LIDSFLCTGNYIVESEKLLRDL 1031


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 218/392 (55%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           ++D L KKG++   +DL+ +M  +G+ PN  TYN LV+ Y K+   +    ++ LM  +K
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDK 280

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
            + +  TY +LI  + ++G + EA ++ ++M    +  D+  + ++I+   + G    AF
Sbjct: 281 VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAF 340

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
            L DEL+E G+  NA T+  +I   C  G++D A  +V  M+  G   + V +NTLI+  
Sbjct: 341 ALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGY 400

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK G ++EA RM DVM +KG + +  T NTI   LC   + +EA   L +  ++G   + 
Sbjct: 401 CKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNA 460

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           VS+  +I  + ++     A +++ +MK++   P+  TYN +I G S+ GK ++A  + +E
Sbjct: 461 VSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDE 520

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +   GM  D  T+ T++HG C  G+VE+AL   N++  K     IVT   ++SGL +EG 
Sbjct: 521 MESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGR 580

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
            E+A + +   +  G   D   Y +L+++L K
Sbjct: 581 SEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 207/403 (51%), Gaps = 7/403 (1%)

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           LG+ K+       M + K    V++  ++I+G C  G +E A  L  EM    + P+VVT
Sbjct: 200 LGFFKK-------MVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVT 252

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YNTL+N + +        +++  ++   +  NA T+ ++I+WY   GKI +A K+   M 
Sbjct: 253 YNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKML 312

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           E G   D   + ++I   CK GNM+ AF + D +  +GL  N  T   ++H  C   +LD
Sbjct: 313 ERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLD 372

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A ML+N    +G  ++ V + TLI GY +    + AL++ D M+++      FTYN + 
Sbjct: 373 AAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIA 432

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL +  + E+A   L  +++ G+ P+  +F  +I   C EG + +A +    M +K  K
Sbjct: 433 GGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEK 492

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P++VT N L+ G  ++G L++A +        G   D  TY TL+   C   ++E+A  L
Sbjct: 493 PNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTL 552

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+E+  K L     TY AI + L + GR EEA +    M+  G
Sbjct: 553 LNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 183/359 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTYNT+++A  K      V ++L  M+   +V N  TY +L+  Y   G 
Sbjct: 241 MTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGK 300

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +V + M +     D+  +  +I+  C  G ++ AF L  E+    L+ +  TY  
Sbjct: 301 IAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGA 360

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+    SG+   A  L++E+   G+  N V  N +I  YCK+G ID+A ++   ME+ G
Sbjct: 361 LIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKG 420

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F  D  TYNT+    CK    EEA R +  M  KG+  N ++   ++   C E  L EA 
Sbjct: 421 FENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAE 480

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +     K+G   + V+Y TLI GY +  K   A +L DEM+   +    +TY  ++ G 
Sbjct: 481 RVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGE 540

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
              GK E+A+ +LNE+ + G+     T+  II G   EG+ E+A + +++M+     PD
Sbjct: 541 CVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPD 599



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 162/299 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D   + +I+    K G +     L  ++ ++GLV N  TY  L+ G C  G L  A
Sbjct: 315 GVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAA 374

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +V+ M       ++  +N LING+C  GM++EA R++  ME      D+ TYNT+   
Sbjct: 375 EMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGG 434

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             +  R  EA + +  + E G+ PNAV+  IMI  +CKEG + +A ++ ++M++ G  P+
Sbjct: 435 LCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPN 494

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTLID   K G ++EA+R+ D M   G+  +  T  T++H  C   K++EA  LLN
Sbjct: 495 VVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLN 554

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              ++G  +  V+Y  +I+G  ++ ++  A +L+DEM    + P    Y +++  L ++
Sbjct: 555 EVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHKT 613



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 221/455 (48%), Gaps = 27/455 (5%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           +ML   + +  M EE F++   M    L  D  +    +     S + + +     ++ E
Sbjct: 149 DMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVE 208

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
             +     +  I+I   CK+G++++A  ++  M   G  P+ VTYNTL++A  K  + E 
Sbjct: 209 FKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEG 268

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCE-----KKLDEAYMLLNSASKRGYYLDEVSY 258
              M+ +M     +M+ +  N   +TL  E      K+ EA  +     +RG   D   +
Sbjct: 269 VNEMLRLM-----EMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVF 323

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
            ++I+   +     RA  L+DE+ ER ++ +  TY A+I G   SG+ + A  ++NE+  
Sbjct: 324 TSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQS 383

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G+  +   FNT+I+G+C +G +++AL+  + M +K F+ DI T N +  GLC+    E+
Sbjct: 384 QGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEE 443

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A ++  + + KG   ++V++  +I   CKE  L +A  +  +M++K   P+  TY  +  
Sbjct: 444 AKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLID 503

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
              + G+L+EA +    M   G                 +     +Y+  ++  C  G+ 
Sbjct: 504 GYSKKGKLKEAYRLKDEMESIG-----------------MTSDIYTYTTLVHGECVFGKV 546

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           ++AL +  E  +KG+AI+  TY  +++GL K  +S
Sbjct: 547 EEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRS 581



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 107/192 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   D  TYNTI   L K  +  E +  L  M ++G+ PN  ++ I++  +CK G 
Sbjct: 416 MEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGN 475

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA RV   M +    P+V TYN LI+G+   G L+EA+RL+ EMES+ +  D+ TY T
Sbjct: 476 LVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTT 535

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++     G+  EA  L++E+   G+  + VT+  +I    KEG+ ++A ++   M   G
Sbjct: 536 LVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595

Query: 181 FSPDCVTYNTLI 192
            +PD   Y +L+
Sbjct: 596 LTPDDRVYTSLV 607


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 259/542 (47%), Gaps = 33/542 (6%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+  T+  ++D L+KKG+ ++ + +  DM  +G+ PNR TY IL+SG C+ G  ++A 
Sbjct: 194 CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDAR 253

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++   M  + + PD   +N L++G+C  G + EAF L +  E    +  +  Y++LI+  
Sbjct: 254 KLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F + R  +AF+L   + +  IKP+ + + I+I+   K GKI+ A K++R+M   G +PD 
Sbjct: 314 FRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDT 373

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             YN +I A C  G +EE   +   M       +  T   ++ ++C    + +A  +   
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLE 433

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE--------RQIMPSTFTYNAMI 297
             K G      ++  LI G  +  +   A  L  +M+         R       +++ M+
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMV 493

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               QSG   +A   L     +G  PD  ++N +I+GFC EG ++ AL+  N +  K   
Sbjct: 494 ----QSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLS 549

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD VT N L++GL R G  E+A K F  +           Y +L++  C+ R+L  AF L
Sbjct: 550 PDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNL 607

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             +  +K    D  T   I     E               ET +   ++++ +T K    
Sbjct: 608 WMKYLKKISCLDDETANEIEQCFKEG--------------ETERALRRLIELDTRKDELT 653

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
           + P    Y+  +   C  GR+ +AL +F   R+K I +   + + L++GL KR + +  A
Sbjct: 654 LGP----YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQ-LDAA 708

Query: 538 VD 539
           +D
Sbjct: 709 ID 710



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 240/528 (45%), Gaps = 71/528 (13%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++  ++D L +    +     L ++K  G+  +   + +L+S Y K+G  ++A+     M
Sbjct: 94  SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEE------AFRLRKEMESLKLLPDVVTYNTLINRF 125
            +    PDV+TYN+++       M+ E      AF +  EM      P++ T+  L++  
Sbjct: 154 KEFDCRPDVFTYNVILR-----IMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL 208

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           ++ GR+ +A K+ D++   GI PN VT+ I+I   C+ G  + A K+   M+ +G  PD 
Sbjct: 209 YKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDS 268

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V +N L+D  CK G M EAF ++ +                                   
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLF---------------------------------- 294

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K G+ L    Y +LI G FR  +  +A +L+  M +R I P    Y  +I GLS++GK
Sbjct: 295 -EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGK 353

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E A+ +L  +   G+ PD   +N +I   C  G +E+      +M E    PD  T  I
Sbjct: 354 IEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+  +CR G++ KA + F      G +    T+N LI  LCK   L++A  LL +ME  +
Sbjct: 414 LICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473

Query: 426 LGPDRYTYAAIHTA------LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
             P        H+       +V+SG + +A K  +   +TG                   
Sbjct: 474 --PASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGN-----------------S 514

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           P  +SY+  IN  C +G    AL++    + KG++ +  TY  L+NGL
Sbjct: 515 PDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 187/374 (50%), Gaps = 7/374 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD   YN ++ AL  +G L E R L  +M +    P+  T+ IL+   C+ G 
Sbjct: 364 MPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  +   + ++   P V T+N LI+G C +G L+EA  L  +ME  +     +    
Sbjct: 424 VRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAH 483

Query: 121 LINRFF----ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
             NR F    +SG  ++A+K +    + G  P+ V++N++I  +C+EG ID A K++  +
Sbjct: 484 SGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVL 543

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +  G SPD VTYNTLI+   + G  EEAF++     +   + +     +++   C  +KL
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKL 601

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
             A+ L     K+   LD+ +    I   F++ +  RAL+   E+  R+   +   Y   
Sbjct: 602 LVAFNLWMKYLKKISCLDDET-ANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           + GL QSG+  +A+ + + L +  ++    +   +IHG C   Q++ A+      ++ +F
Sbjct: 661 LIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNF 720

Query: 357 KPDIVTCNILLSGL 370
           K     CN LLS L
Sbjct: 721 KLMPRVCNYLLSSL 734



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 213/533 (39%), Gaps = 115/533 (21%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ VTY  ++  L ++G   + R L  +MK  G  P+   +N L+ G+CKLG 
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGR 283

Query: 61  LKEAMRVVDLM-------------------------TQNKSL----------PDVWTYNM 85
           + EA  ++ L                          TQ   L          PD+  Y +
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTI 343

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI G   AG +E+A +L + M S  + PD   YN +I      G   E   L  E+ E  
Sbjct: 344 LIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P+A TH I+I   C+ G + KA +I   +E++G SP   T+N LID  CK+G ++EA 
Sbjct: 404 SFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEAR 463

Query: 206 -----------------------RMMDVMGRKGLKM----------------NTITLNTI 226
                                  R  D M + G  +                + ++ N +
Sbjct: 464 LLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVL 523

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           ++  C E  +D A  LLN    +G   D V+Y TLI G  R  +   A KL+    + + 
Sbjct: 524 INGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH 583

Query: 287 MPSTFTYNAMIWGLSQ---------------------------------SGKTEQAIDML 313
            P+ +  + M W   +                                  G+TE+A+  L
Sbjct: 584 SPAVYR-SLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRL 642

Query: 314 NELLQSGMIPDETT---FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            EL       DE T   +   + G C  G+  +AL   + + EK       +C  L+ GL
Sbjct: 643 IEL---DTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGL 699

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER-RLEDAFGLLSEME 422
           C+   L+ A+  F   +     +     N L+SSL + R ++E    L + ME
Sbjct: 700 CKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLLQSREKMEIVSQLTNRME 752



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 152/386 (39%), Gaps = 58/386 (15%)

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
           N +  FR      R+    +  +   ++  L  +   D  +  L      G  +D   + 
Sbjct: 72  NRQLGFRFFIWASRRERLRSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFC 131

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW--------------------- 298
            LI+ Y +   A +A++ +  MKE    P  FTYN ++                      
Sbjct: 132 VLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLK 191

Query: 299 ---------------GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
                          GL + G+T  A  M +++   G+ P+  T+  +I G C  G  E 
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPED 251

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +   +M      PD V  N LL G C+ G + +A +  R +   G  +    Y++LI 
Sbjct: 252 ARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI- 462
            L + RR   AF L + M ++ + PD   Y  +   L ++G++E+A K    M   G   
Sbjct: 312 GLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITP 371

Query: 463 -------------------NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
                                + +Q   S+T  E  P + +++  I   C  G  + A +
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSET--ESFPDACTHTILICSMCRNGLVRKAEE 429

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIK 529
           IF E  + G + + +T+  L++GL K
Sbjct: 430 IFLEIEKSGCSPSVATFNALIDGLCK 455



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 269 EKANRALK----LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           E+ NR L     +W   +ER  + S  ++  +I  LS+    +     L EL   G+  D
Sbjct: 69  EEVNRQLGFRFFIWASRRER--LRSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVD 126

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK-ALKFF 383
              F  +I  +   G  EKA++   +M E   +PD+ T N++L  + RE +    A   +
Sbjct: 127 SYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVY 186

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
              +    + +  T+  L+  L K+ R  DA  +  +M  + + P+R TY  + + L + 
Sbjct: 187 NEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQR 246

Query: 444 GRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
           G  E+A+K    M  +G                   P S++++  ++  C  GR  +A +
Sbjct: 247 GSPEDARKLFYEMKASGNY-----------------PDSVAHNALLDGFCKLGRMVEAFE 289

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +     + G  +    Y +L++GL + R+
Sbjct: 290 LLRLFEKDGFVLGLRGYSSLIDGLFRARR 318


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 195/364 (53%), Gaps = 3/364 (0%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G  PN   +NIL+ G+CK+G +  A  V D +++    P V ++N LI+G+C +  +EE 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           F L+  MES ++ PDV TY+ LIN   +  R  EA  L DE+ E G+ PN VT   +I  
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CK GKID A +    M++ G  PD +TYN LI+  C+ G+++EA ++++ M   G K +
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            IT  T++   C +  +D A  + +   + G  LD+V++  LI+G  RD +   A ++  
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           +M      P   TY  +I    + G  +    +L E+ + G +P   T+N +++GFC +G
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           Q++ A    + M+     P+ +T NILL G C+ G      K F     KG   D  +Y 
Sbjct: 521 QMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS-SVDFKIFNGE--KGLVSDYASYT 577

Query: 400 TLIS 403
            L++
Sbjct: 578 ALVN 581



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 235/468 (50%), Gaps = 21/468 (4%)

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE-SGR 130
           T ++    V  ++ LI  + ++  +E+A +  + ++       V   + L+ R  + + +
Sbjct: 147 THHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQ 206

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
               ++   E+ ++G  PN    NI++  +CK G +  A  +   +   G  P  V++NT
Sbjct: 207 PGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNT 266

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   C++ N+EE F +  VM  + +  +  T + +++ LC E +++EA  L +   + G
Sbjct: 267 LISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMG 326

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V++ TLI G  +  K + AL+ ++ MK+R I P   TYNA+I GL + G  ++A 
Sbjct: 327 LVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEAR 386

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +LNE++ +G  PD+ TF T++ G C +G ++ AL+  ++MVE+  + D V    L+SGL
Sbjct: 387 KLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR+G +  A +  +  +  G   D  TY  +I   CK+  ++    LL EM+     P  
Sbjct: 447 CRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGV 506

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY A+     + G+++ A+     M+                   E+ P+ I+++  ++
Sbjct: 507 VTYNALMNGFCKQGQMKNAKMLLHAMLNM-----------------EVVPNDITFNILLD 549

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            HC  G   D  +IF    +KG+  + ++Y  L+N  IK  K   K+V
Sbjct: 550 GHCKHGSSVD-FKIFNG--EKGLVSDYASYTALVNESIKISKDQLKSV 594



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 186/336 (55%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  P+   +N ++    K G +   R +  ++ ++GL P+  ++N L+SGYC+   ++E
Sbjct: 220 YGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEE 279

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              +  +M   +  PDV+TY+ LING C    +EEA  L  EM  + L+P+ VT+ TLI+
Sbjct: 280 GFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLID 339

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + G+   A +  + + + GI+P+ +T+N +I   C++G + +A K++  M  NGF P
Sbjct: 340 GQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKP 399

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +T+ TL+D  CK G+M+ A  + D M  +G++++ +    ++  LC + ++ +A  +L
Sbjct: 400 DKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERML 459

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G+  D+ +Y  +I  + +        KL  EM+    +P   TYNA++ G  + 
Sbjct: 460 KDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQ 519

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           G+ + A  +L+ +L   ++P++ TFN ++ G C  G
Sbjct: 520 GQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 156/290 (53%), Gaps = 3/290 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TY+ +++ L K+ ++ E   L  +M + GLVPN  T+  L+ G CK G +  A+R 
Sbjct: 294 PDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRN 353

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            ++M      PD+ TYN LING C  G L+EA +L  EM      PD +T+ TL++   +
Sbjct: 354 FEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCK 413

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A ++ D + E GI+ + V    +I   C++G++  A +++++M   G  PD  T
Sbjct: 414 DGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPT 473

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  +ID  CK G+++   +++  M R G     +T N +++  C + ++  A MLL++  
Sbjct: 474 YTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAML 533

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
                 +++++  L+ G+ +   ++   K+++   E+ ++    +Y A++
Sbjct: 534 NMEVVPNDITFNILLDGHCK-HGSSVDFKIFN--GEKGLVSDYASYTALV 580



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 3/216 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD +TYN +++ L + G L E R LL++M   G  P++ T+  L+ G CK G 
Sbjct: 357 MKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ + D M +     D   +  LI+G C  G + +A R+ K+M S    PD  TY  
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM 476

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ F + G      KL+ E+   G  P  VT+N ++  +CK+G++  A  ++  M    
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNME 536

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
             P+ +T+N L+D +CK G+  + F++ +  G KGL
Sbjct: 537 VVPNDITFNILLDGHCKHGSSVD-FKIFN--GEKGL 569


>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 238/454 (52%), Gaps = 10/454 (2%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  +  + K  ++ +   +L D  K GL P+  TYN L+ GYC+   +  A  +++ M +
Sbjct: 11  NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               PDV +YN L +G     +L+++  L  EM    + PDV +YN L++ +F  G+  E
Sbjct: 71  AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEE 130

Query: 134 AFKLIDELDEHG-IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           A  +  ++ E G I P+  ++N+MI   CK G ++ A  + RN+   GF P+ +TYN +I
Sbjct: 131 ANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMI 190

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK--KLDEAYMLLNSASKRG 250
           +  CKA  + +A R+++     G + N IT  T++   CC +  +L++   +L+   ++G
Sbjct: 191 NGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMK--CCFRCGRLEQGLEILSEMRRKG 248

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
           +  D  +Y T++    +  +   A ++ ++M    ++P   +YN MI    + G+ ++A+
Sbjct: 249 FTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEAL 308

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +++E+ + GM  D+ T   IIHG C +G  E A +  + M    F  ++V  N +L  L
Sbjct: 309 RLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCL 368

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            + G ++KA+K F S  +K    DS TY +L+ +LC+ ++   A  LL    E      R
Sbjct: 369 GKAGDIDKAVKVFDSMEVK----DSFTYTSLLHNLCRAKKFRIASKLLVASIEDGFQILR 424

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            T  A+   L  SG + EA+K   + ++  ++ H
Sbjct: 425 ATQRAVIDGLTTSGLVYEARK-VKLKIQRARLVH 457



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 198/382 (51%), Gaps = 5/382 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD V+YN++     +K  L +  DL  +M + G+ P+  +YNIL+  Y +LG 
Sbjct: 68  MKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGK 127

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            +EA  V  D+  + +  P + +YN++ING C  G +  A  L + +     +P+V+TYN
Sbjct: 128 PEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYN 187

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +IN   ++ R  +A ++++E  + G +PNA+T+  ++K   + G++++  +I+  M   
Sbjct: 188 AMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRK 247

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           GF+ D   Y T++ A  K G +EEA  + + M   GL  +  + NT+++  C + + DEA
Sbjct: 248 GFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEA 307

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L++   K+G   D+ ++  +I G  +D     A K  D M       +   +N+++  
Sbjct: 308 LRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDC 367

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G  ++A+ + + +     + D  T+ +++H  C   +   A +     +E  F+  
Sbjct: 368 LGKAGDIDKAVKVFDSM----EVKDSFTYTSLLHNLCRAKKFRIASKLLVASIEDGFQIL 423

Query: 360 IVTCNILLSGLCREGILEKALK 381
             T   ++ GL   G++ +A K
Sbjct: 424 RATQRAVIDGLTTSGLVYEARK 445



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 53/349 (15%)

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           +++T  +N  + T+C   ++ +A  +L    K G   D ++Y TLI GY R    + A  
Sbjct: 4   RLSTKFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYN 63

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           + + MKE  I P   +YN++  G  +    ++++D+ +E+LQSG+ PD  ++N ++H + 
Sbjct: 64  ILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYF 123

Query: 337 SEGQVEKALQFHNKMVEKS-FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
             G+ E+A      + E+    P + + N++++GLC+ G +  AL  FR+   +G   + 
Sbjct: 124 RLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEV 183

Query: 396 VTYNTLISSLCKERRLEDA---------FG--------------------------LLSE 420
           +TYN +I+ LCK RRL DA         FG                          +LSE
Sbjct: 184 LTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSE 243

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  K    D + Y  +  ALV++GR+EEA +    M+  G +                 P
Sbjct: 244 MRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLV-----------------P 286

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              SY+  IN  C QGR+ +AL++ +E  ++G+  ++ T+  +++GL K
Sbjct: 287 DLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCK 335


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 3/365 (0%)

Query: 39  QGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE 98
            G  PN   +N+L+ G+CK+G +  A  V D + +    P V ++N LI+G C AG +EE
Sbjct: 136 SGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEE 195

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
            FRL+  MES ++ PDV T++ LIN   + GR  E   L DE+   G+ PN VT  ++I 
Sbjct: 196 GFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLID 255

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
             CK GK+D A K  + M   G  PD VTYN LI+  CK G+++EA R+++ M   GL+ 
Sbjct: 256 GQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRP 315

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           + IT  T++   C    ++ A  +     + G  LD+V++  LI+G  RD + + A ++ 
Sbjct: 316 DRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERML 375

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            +M      P   TY  ++    + G       +L E+   G +P   T+N +++G C +
Sbjct: 376 RDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQ 435

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           GQV+ A    + M+     P+ +T NILL G  + G     +  F S   KG   D  +Y
Sbjct: 436 GQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS-SVDVDIFNSE--KGLVKDYASY 492

Query: 399 NTLIS 403
             L++
Sbjct: 493 TALVN 497



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 197/392 (50%), Gaps = 22/392 (5%)

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           AF L  E+ + G  PN    N+++  +CK G +  A  +   + + G  P  V++NTLI 
Sbjct: 128 AFYL--EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLIS 185

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CKAG +EE FR+  VM  + +  +  T + +++ LC E +LDE  +L +    +G   
Sbjct: 186 GCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVP 245

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           + V++  LI G  +  K + ALK +  M  + + P   TYNA+I GL + G  ++A  ++
Sbjct: 246 NGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLV 305

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           NE+  SG+ PD  TF T+I G C  G +E AL+   +MVE+  + D V   +L+SGLCR+
Sbjct: 306 NEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRD 365

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G +  A +  R  +  G   D  TY  ++   CK+  +   F LL EM+     P   TY
Sbjct: 366 GRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTY 425

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
            A+   L + G+++ A+     M+  G                 + P+ I+Y+  +  H 
Sbjct: 426 NALMNGLCKQGQVKNAKMLLDAMLNVG-----------------VAPNDITYNILLEGHS 468

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             G   D + IF    +KG+  + ++Y  L+N
Sbjct: 469 KHGSSVD-VDIFNS--EKGLVKDYASYTALVN 497



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 178/336 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+   +N ++    K G +   R +  ++ K+GL P   ++N L+SG CK G ++E 
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+  +M   +  PDV+T++ LING C  G L+E   L  EM    L+P+ VT+  LI+ 
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+   A K    +   G++P+ VT+N +I   CK G + +A ++V  M  +G  PD
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+ TLID  CK G+ME A  +   M  +G++++ +    ++  LC + ++ +A  +L 
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLR 376

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+  D+ +Y  ++  + +        KL  EM+    +P   TYNA++ GL + G
Sbjct: 377 DMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 436

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           + + A  +L+ +L  G+ P++ T+N ++ G    G 
Sbjct: 437 QVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 167/308 (54%), Gaps = 6/308 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     PD  T++ +++ L K+G+L+E   L  +M  +GLVPN  T+ +L+ G CK G 
Sbjct: 203 MESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGK 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A++   +M      PD+ TYN LING C  G L+EA RL  EM +  L PD +T+ T
Sbjct: 263 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTT 322

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A ++   + E GI+ + V   ++I   C++G++  A +++R+M   G
Sbjct: 323 LIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAG 382

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD  TY  ++D  CK GN+   F+++  M   G     +T N +++ LC + ++  A 
Sbjct: 383 FKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAK 442

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL++    G   ++++Y  L+ G+    K   ++ +     E+ ++    +Y A++   
Sbjct: 443 MLLDAMLNVGVAPNDITYNILLEGH---SKHGSSVDVDIFNSEKGLVKDYASYTALV--- 496

Query: 301 SQSGKTEQ 308
           ++S KT +
Sbjct: 497 NESSKTSK 504



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 17/357 (4%)

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           ++G+ P+   +N L+   CK G +  A  + D + ++GL+   ++ NT++   C    ++
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           E + L           D  ++  LI G  ++ + +    L+DEM  + ++P+  T+  +I
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLI 254

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            G  + GK + A+     +L  G+ PD  T+N +I+G C  G +++A +  N+M     +
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLR 314

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD +T   L+ G C+ G +E AL+  R  + +G  +D V +  LIS LC++ R+ DA  +
Sbjct: 315 PDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERM 374

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L +M      PD  TY  +     + G +    K    M   G +               
Sbjct: 375 LRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHV--------------- 419

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
             P  ++Y+  +N  C QG+ K+A  + +     G+A N  TY  L+ G  K   S+
Sbjct: 420 --PGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSV 474



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 17/264 (6%)

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R  +  R+   + E+ +    P+ F +N ++ G  + G    A  + +E+ + G+ P  
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            +FNT+I G C  G VE+  +    M  +   PD+ T + L++GLC+EG L++    F  
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              KG   + VT+  LI   CK  +++ A      M  + + PD  TY A+   L + G 
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           L+EA++  + M  +G                 + P  I+++  I+  C  G  + AL+I 
Sbjct: 298 LKEARRLVNEMSASG-----------------LRPDRITFTTLIDGCCKYGDMESALEIK 340

Query: 506 EETRQKGIAINKSTYMNLMNGLIK 529
               ++GI ++   +  L++GL +
Sbjct: 341 RRMVEEGIELDDVAFTVLISGLCR 364


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 153/560 (27%), Positives = 264/560 (47%), Gaps = 56/560 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY T+LD       L+ V+   S+M+K G VP+  T+ ILV   CK G   EA   
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D+M     LP++ TYN LI G      L++A  L   MESL + P   TY   I+ + +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG S+ A +  +++   GI PN V  N  +    K G+  +A +I   +++ G  PD VT
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN ++    K G ++EA +++  M   G + + I +N++++TL    ++DEA+ +     
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +       V+Y TL+ G  ++ K   A++L++ M ++   P+T T+N +   L ++ +  
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ ML +++  G +PD  T+NTII G    GQV++A+ F ++M +K   PD VT   LL
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLL 684

Query: 368 SGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISSLCKERRLEDAFGL--------- 417
            G+ +  ++E A K   +++        ++ +  LI S+  E  +++A            
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744

Query: 418 --------------------------LSEMEEKKLG--PDRYTYAAIHTALVESGRLEEA 449
                                     L E   K LG  P   TY  +   L+E+  +E A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           Q     +  TG I                 P   +Y+  ++ +   G+  +  ++++E  
Sbjct: 805 QDVFLQVKSTGCI-----------------PDVATYNFLLDAYGKSGKIDELFELYKEMS 847

Query: 510 QKGIAINKSTYMNLMNGLIK 529
                 N  T+  +++GL+K
Sbjct: 848 THECEANTITHNIVISGLVK 867



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 241/514 (46%), Gaps = 70/514 (13%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TY TI  +L  KG L +    L  M++ G V N  +YN L+    K  +  EAM V 
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M      P + TY+ L+ G      ++    L KEME+L L P+V T+   I     +
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM------------ 176
           G+  EA++++  +D+ G  P+ VT+ ++I   C   K+D A ++   M            
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331

Query: 177 -----------------------EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
                                  E++G  PD VT+  L+DA CKAGN  EAF  +DVM  
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +G+  N  T NT++  L    +LD+A  L  +    G      +Y   I  Y +   +  
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451

Query: 274 ALKLWDEMKERQI-----------------------------------MPSTFTYNAMIW 298
           AL+ +++MK + I                                   +P + TYN M+ 
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
             S+ G+ ++AI +L+E++++G  PD    N++I+      +V++A +   +M E   KP
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            +VT N LL+GL + G +++A++ F   + KG   +++T+NTL   LCK   +  A  +L
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +M +    PD +TY  I   LV++G+++EA  F
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 257/532 (48%), Gaps = 21/532 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD VTY  ++DAL    KL+  +++   MK     P+R TY  L+  +     
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L    +    M ++  +PDV T+ +L++  C AG   EAF     M    +LP++ TYNT
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       R  +A +L   ++  G+KP A T+ + I +Y K G    A +    M+  G
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ V  N  + +  KAG   EA ++   +   GL  +++T N ++       ++DEA 
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   + G   D +   +LI   ++ ++ + A K++  MKE ++ P+  TYN ++ GL
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK ++AI++   ++Q G  P+  TFNT+    C   +V  AL+   KM++    PD+
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T N ++ GL + G +++A+ FF   + K    D VT  TL+  + K   +EDA+ +++ 
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702

Query: 421 M--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
                     + +    I + L E+G ++ A  F+  +V  G            +  + I
Sbjct: 703 FLYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLVANG----------ICRDGDSI 751

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNGLIK 529
               I YS      C       A  +FE+ T+  G+     TY  L+ GL++
Sbjct: 752 LVPIIRYS------CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 258/559 (46%), Gaps = 60/559 (10%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  VTYNT+L  L K GK+ E  +L   M ++G  PN  T+N L    CK   +  A+++
Sbjct: 571  PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  M     +PDV+TYN +I G    G ++EA     +M+ L + PD VT  TL+    +
Sbjct: 631  LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVK 689

Query: 128  SGRSMEAFKLIDE---------------------LDEHGIKPNAVTHN------------ 154
            +    +A+K+I                       L E GI  NAV+ +            
Sbjct: 690  ASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDG 748

Query: 155  -----IMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
                  +I++ CK   +  A  +     ++ G  P   TYN LI    +A  +E A  + 
Sbjct: 749  DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808

Query: 209  DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
              +   G   +  T N +L       K+DE + L    S      + +++  +I+G  + 
Sbjct: 809  LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868

Query: 269  EKANRALKLW-DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
               + AL L+ D M +R   P+  TY  +I GLS+SG+  +A  +   +L  G  P+   
Sbjct: 869  GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928

Query: 328  FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            +N +I+GF   G+ + A     +MV++  +PD+ T ++L+  LC  G +++ L +F+   
Sbjct: 929  YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988

Query: 388  LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTALVESGRL 446
              G   D V YN +I+ L K  RLE+A  L +EM+  + + PD YTY ++   L  +G +
Sbjct: 989  ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048

Query: 447  EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
            EEA          GKI +++ +         ++P+  +++  I  +   G+ + A  +++
Sbjct: 1049 EEA----------GKIYNEIQRAG-------LEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091

Query: 507  ETRQKGIAINKSTYMNLMN 525
                 G + N  TY  L N
Sbjct: 1092 TMVTGGFSPNTGTYEQLPN 1110



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 265/571 (46%), Gaps = 57/571 (9%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  G  P+ V  N  L +L K G+  E + +   +K  GLVP+  TYN+++  Y K+G 
Sbjct: 459  MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + EA++++  M +N   PDV   N LIN    A  ++EA+++   M+ +KL P VVTYNT
Sbjct: 519  IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            L+    ++G+  EA +L + + + G  PN +T N +    CK  ++  A K++  M + G
Sbjct: 579  LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638

Query: 181  FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              PD  TYNT+I    K G ++EA      M +K +  + +TL T+L  +     +++AY
Sbjct: 639  CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAY 697

Query: 241  -----MLLNSASKRGYYLDEVSYGTLIT-----------------GYFRD---------- 268
                  L N A +      E   G+++                  G  RD          
Sbjct: 698  KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757

Query: 269  -----EKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
                    + A  L+++  K+  + P   TYN +I GL ++   E A D+  ++  +G I
Sbjct: 758  YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817

Query: 323  PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
            PD  T+N ++  +   G++++  + + +M     + + +T NI++SGL + G ++ AL  
Sbjct: 818  PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877

Query: 383  FRSWIL-KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
            +   +  +  +  + TY  LI  L K  RL +A  L   M +    P+   Y  +     
Sbjct: 878  YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937

Query: 442  ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
            ++G  + A      MV+ G                 + P   +YS  ++  C  GR  + 
Sbjct: 938  KAGEADAACALFKRMVKEG-----------------VRPDLKTYSVLVDCLCMVGRVDEG 980

Query: 502  LQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            L  F+E ++ G+  +   Y  ++NGL K  +
Sbjct: 981  LHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 1/192 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +GC P+   YN +++   K G+ +    L   M K+G+ P+  TY++LV   C +G 
Sbjct: 917  MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYN 119
            + E +     + ++   PDV  YN++ING   +  LEEA  L  EM++ + + PD+ TYN
Sbjct: 977  VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036

Query: 120  TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +LI     +G   EA K+ +E+   G++PN  T N +I+ Y   GK + A  + + M   
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096

Query: 180  GFSPDCVTYNTL 191
            GFSP+  TY  L
Sbjct: 1097 GFSPNTGTYEQL 1108



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 215/521 (41%), Gaps = 32/521 (6%)

Query: 32  LLSDMK---KQGLVPNRTTYNILVSGYCKLGWLKEAMR--VVDL--------MTQNKSLP 78
           L+S++K   +  LV     ++ L  G  K  W +++MR  VV +        M +  S P
Sbjct: 21  LVSNIKAKCRDNLVTGGLKFHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKP 80

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEME-SLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           D+ +   +  G  +    + +F   K +  +L L+    T N ++      G+  E   +
Sbjct: 81  DLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYV 140

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            D + +  IK +  T+  + K    +G + +A   +R M E GF  +  +YN LI    K
Sbjct: 141 FDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLK 200

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           +    EA  +   M  +G + +  T ++++  L   + +D    LL      G   +  +
Sbjct: 201 SRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +   I    R  K N A ++   M +    P   TY  +I  L  + K + A ++  ++ 
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
                PD  T+ T++  F     ++   QF ++M +    PD+VT  IL+  LC+ G   
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A         +G   +  TYNTLI  L +  RL+DA  L   ME   + P  YTY    
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
               +SG    A +    M   G                 I P+ ++ +  +      GR
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKG-----------------IAPNIVACNASLYSLAKAGR 483

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            ++A QIF   +  G+  +  TY N+M     +   I +A+
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTY-NMMMKCYSKVGEIDEAI 523



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK-KQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD V YN I++ L K  +L E   L ++MK  +G+ P+  TYN L+      G ++E
Sbjct: 991  GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050

Query: 64   AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            A ++ + + +    P+V+T+N LI G+  +G  E A+ + + M +    P+  TY  L N
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110

Query: 124  R 124
            R
Sbjct: 1111 R 1111


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 256/521 (49%), Gaps = 19/521 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V+ + +L+   +  K      +L+ M K+G   N   +NIL+ G C+     +A+ ++  
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +N  +PDV++YN +I G+C    LE+A  L  EM+       +VT+  LI+ F ++G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EA   + E+   G++ + V +  +I+ +C  G++D+   +   + E G SP  +TYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI   CK G ++EA  + + M  +G++ N  T   ++  LC   K  EA   LN   ++ 
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKD 347

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + V+Y  +I    +D     A+++ + MK+R+  P   TYN ++ GL   G  ++A 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 311 DMLNELLQ--SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
            +L  +L+  S   PD  ++N +IHG C E ++ +AL  ++ +VEK    D VT NILL+
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
              + G + KA++ ++         +S TY  +I   CK   L  A GLL +M   +L P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
             + Y  + ++L + G L++A +    M                       P  +S++  
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-----------------PDVVSFNIM 570

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           I+     G  K A  +     + G++ +  TY  L+N  +K
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 231/456 (50%), Gaps = 2/456 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD  +YNT++    +  +L +  +L ++MK  G   +  T+ IL+  +CK G + EAM 
Sbjct: 174 MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +  M       D+  Y  LI G+C+ G L+    L  E+      P  +TYNTLI  F 
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           + G+  EA ++ + + E G++PN  T+  +I   C  GK  +A + +  M E    P+ V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAV 353

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYN +I+  CK G + +A  ++++M ++  + + IT N +L  LC +  LDEA  LL   
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 247 SKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            K   Y D   +SY  LI G  ++ + ++AL ++D + E+       T N ++    ++G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A+++  ++  S ++ +  T+  +I GFC  G +  A     KM     +P +   N
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LLS LC+EG L++A + F          D V++N +I    K   ++ A  LL  M   
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L PD +TY+ +    ++ G L+EA  F   MV++G
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 233/460 (50%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G GC    VT+  ++DA  K GK++E    L +MK  GL  +   Y  L+ G+C  G 
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L     + D + +    P   TYN LI G+C  G L+EA  + + M    + P+V TY  
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G++ EA + ++ + E   +PNAVT+NI+I   CK+G +  A +IV  M++  
Sbjct: 323 LIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG--LKMNTITLNTILHTLCCEKKLDE 238
             PD +TYN L+   C  G+++EA +++ +M +       + I+ N ++H LC E +L +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  + +   ++    D V+   L+    +    N+A++LW ++ + +I+ ++ TY AMI 
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  ++G    A  +L ++  S + P    +N ++   C EG +++A +   +M   +  P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+V+ NI++ G  + G ++ A          G + D  TY+ LI+   K   L++A    
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +M +    PD +   ++    +  G  ++  +    +V+
Sbjct: 623 DKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 208/435 (47%), Gaps = 19/435 (4%)

Query: 97  EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
           E AF   ++M       + V+ + L+  + +  ++  AF ++  + + G   N   HNI+
Sbjct: 89  ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           +K  C+  +  KA  ++R M  N   PD  +YNT+I   C+   +E+A  + + M   G 
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
             + +T   ++   C   K+DEA   L      G   D V Y +LI G+    + +R   
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L+DE+ ER   P   TYN +I G  + G+ ++A ++   +++ G+ P+  T+  +I G C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G+ ++ALQ  N M+EK  +P+ VT NI+++ LC++G++  A++       +    D++
Sbjct: 329 GVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 397 TYNTLISSLCKERRLEDAFGLLSEM--EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           TYN L+  LC +  L++A  LL  M  +     PD  +Y A+   L +  RL +A     
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
           ++VE      +V                 + +  +N     G    A++++++     I 
Sbjct: 449 LLVEKLGAGDRV-----------------TTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 515 INKSTYMNLMNGLIK 529
            N  TY  +++G  K
Sbjct: 492 RNSDTYTAMIDGFCK 506



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 185/365 (50%), Gaps = 3/365 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TY  ++D L   GK  E    L+ M ++   PN  TYNI+++  CK G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLI 122
           + +V+LM + ++ PD  TYN+L+ G C  G L+EA +L   M  +S    PDV++YN LI
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   +  R  +A  + D L E     + VT NI++    K G ++KA ++ + + ++   
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            +  TY  +ID  CK G +  A  ++  M    L+ +    N +L +LC E  LD+A+ L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                +   + D VS+  +I G  +      A  L   M    + P  FTY+ +I    +
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI-V 361
            G  ++AI   ++++ SG  PD    ++++    S+G+ +K  +   K+V+K    D  +
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671

Query: 362 TCNIL 366
           TC ++
Sbjct: 672 TCTVM 676



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 144/320 (45%), Gaps = 45/320 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLV--PNRTTYNILVSGYCKLGWLKEAM 65
           PDN+TYN +L  L  KG L+E   LL  M K      P+  +YN L+ G CK   L +A+
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 66  RVVDLMTQ-----------------------NKSLPDVW-------------TYNMLING 89
            + DL+ +                       NK++ ++W             TY  +I+G
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM-ELWKQISDSKIVRNSDTYTAMIDG 503

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
           +C  GML  A  L  +M   +L P V  YN L++   + G   +A++L +E+      P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            V+ NIMI    K G I  A  ++  M   G SPD  TY+ LI+   K G ++EA    D
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            M   G + +    +++L     + + D+   L+     +   LD+    T +  Y  + 
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT-VMDYMCNS 682

Query: 270 KAN-----RALKLWDEMKER 284
            AN     R L++ D+ +ER
Sbjct: 683 SANMDLAKRLLRVTDDKEER 702


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 255/526 (48%), Gaps = 20/526 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +++N ++ AL   G +   +  L  M K GL P+R TY+ L+ G CK+G+L EA+ +
Sbjct: 236 PLGMSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDL 295

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + +T+     +  TYN LING+   G+  E  ++ + M    + PD+VTY  LI    E
Sbjct: 296 FERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCE 355

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG   E  K+ +++ + G++ N VT+++++    K+G + +A  ++  +   G   D + 
Sbjct: 356 SGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIA 415

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN--TILHTLCCEKKLDEAYMLLNS 245
           Y+ LI   CK G +E A  + DVM     K+   +LN  +IL  LC +  L EA   L +
Sbjct: 416 YSILIHGYCKLGEIERALEVCDVMCCSQ-KVVPTSLNHLSILVGLCKKGLLVEARWYLEN 474

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            + +    D V Y  +I GY +    + A+ L+D++    + P+  T N++++G  + G 
Sbjct: 475 VAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGD 534

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A      +  S ++P   T+ T++      G+V   L    +MVEK  KP+ +T ++
Sbjct: 535 LQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSV 594

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ GLC+E     A+ F  +   +G   D VTYNTLI   C+ + ++ AF +   M    
Sbjct: 595 VIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCG 654

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           + P   TY  +   L   G++ +A+     + E G                 I+    +Y
Sbjct: 655 IVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERG-----------------IELRKFAY 697

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +  I   C++G   +A+ +F +    G       +   +N L KR+
Sbjct: 698 TTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRK 743



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 251/517 (48%), Gaps = 22/517 (4%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL-PDVWTYNMLING 89
           +L  +M+  G+  +  +++I++ G CK   + EA+  +    + +   P   ++N+L++ 
Sbjct: 188 ELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSA 247

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            CN G ++ A      M    L PD  TY+TLI+   + G   EA  L + + E G+K  
Sbjct: 248 LCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLE 307

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
            VT+N +I  Y   G   +  KI++ M   G  PD VTY  LI  +C++G++EE  ++ +
Sbjct: 308 TVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRN 367

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            +  +GL++N +T + +L+ L  +  + EA  LL      G  +D ++Y  LI GY +  
Sbjct: 368 DILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLG 427

Query: 270 KANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
           +  RAL++ D M   ++++P++  + +++ GL + G   +A   L  +       D   +
Sbjct: 428 EIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLY 487

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N +I G+   G +  A+  ++++V     P IVTCN +L G C+ G L+ A  +FR+  +
Sbjct: 488 NVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQI 547

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
                  VTY TL+ +L +  ++     +L EM EK + P+  TY+ +   L +  R  +
Sbjct: 548 SSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHD 607

Query: 449 AQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEIDPSSISYSEKI 489
           A  F   M   G +N   V  NT                         I P+ ++Y+  I
Sbjct: 608 AIHFLDNMHGEG-VNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLI 666

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           N  C +G+   A  + E  R++GI + K  Y  L+  
Sbjct: 667 NVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKA 703



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 226/496 (45%), Gaps = 36/496 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  PD  TY+T++  L K G L+E  DL   + ++G+     TYN L++GY  LG 
Sbjct: 264 MLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGL 323

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +E  +++  M      PD+ TY +LI G C +G +EE  ++R ++    L  ++VTY+ 
Sbjct: 324 TREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSV 383

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI-------- 172
           L+N  F+ G   EA  L+ E+   G+  + + ++I+I  YCK G+I++A ++        
Sbjct: 384 LLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQ 443

Query: 173 ------------------------VRNMEEN---GFSP-DCVTYNTLIDANCKAGNMEEA 204
                                    R   EN    + P D V YN +ID   K G++  A
Sbjct: 444 KVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNA 503

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             + D +   G+    +T N+IL+  C    L  A     +          V+Y TL+  
Sbjct: 504 VGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDA 563

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                K N  L +  EM E+ I P+  TY+ +I GL +  +   AI  L+ +   G+  D
Sbjct: 564 LSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNAD 623

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+NT+I GFC    ++ A   H++MV     P  VT N L++ LC +G + +A     
Sbjct: 624 PVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLE 683

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S   +G  +    Y TLI + C +    +A  L  ++ +         ++A    L +  
Sbjct: 684 SLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRK 743

Query: 445 RLEEAQKFTSIMVETG 460
             +EA  F   M+  G
Sbjct: 744 FAKEAVMFIPFMLSAG 759



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 208/403 (51%), Gaps = 3/403 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY+ +L+ALFKKG ++E  +LL ++   GL  +   Y+IL+ GYCKLG ++ A+ V D+
Sbjct: 379 VTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDV 438

Query: 71  MT-QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP-DVVTYNTLINRFFES 128
           M    K +P    +  ++ G C  G+L EA R   E  ++K  P DVV YN +I+ + + 
Sbjct: 439 MCCSQKVVPTSLNHLSILVGLCKKGLLVEA-RWYLENVAVKYQPGDVVLYNVVIDGYAKI 497

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A  L D++   G+ P  VT N ++  YCK G +  A    R ++ +   P  VTY
Sbjct: 498 GDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTY 557

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            TL+DA  +AG +     ++  M  KG+K N IT + ++  LC E +  +A   L++   
Sbjct: 558 TTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHG 617

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D V+Y TLI G+   +    A  + D M    I+P+  TYN +I  L   G+  Q
Sbjct: 618 EGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQ 677

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L  L + G+   +  + T+I   C++G   +A+    K+++  F+  +   +  ++
Sbjct: 678 AEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAIN 737

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            LC+    ++A+ F    +  G   D+  Y  L+ +L K + L
Sbjct: 738 RLCKRKFAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKEL 780



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 171/329 (51%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P ++ + +IL  L KKG L E R  L ++  +    +   YN+++ GY K+G +  A+ 
Sbjct: 446 VPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVG 505

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D +      P + T N ++ G+C  G L+ A    + ++   LLP +VTY TL++   
Sbjct: 506 LYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALS 565

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           E+G+      ++ E+ E GIKPNA+T++++IK  CKE +   A   + NM   G + D V
Sbjct: 566 EAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPV 625

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYNTLI   C+  +++ AF + D M   G+    +T N +++ LC + ++ +A  LL S 
Sbjct: 626 TYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESL 685

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            +RG  L + +Y TLI           A+ L+ ++ +     +   ++A I  L +    
Sbjct: 686 RERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRKFA 745

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           ++A+  +  +L +G+ PD   +  ++   
Sbjct: 746 KEAVMFIPFMLSAGVFPDTQVYYVLVRAL 774



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 229/506 (45%), Gaps = 60/506 (11%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P    ++ L N +  A M+ +A  +  +M SL +   V TY++L+     +  ++E F  
Sbjct: 133 PSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGLRMTDMALELF-- 190

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANC 196
            +E++ +GI  +  +H+I+I   CK+ K+ +A   ++   +   F P  +++N L+ A C
Sbjct: 191 -EEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALC 249

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
             G ++ A   + +M + GL  +  T +T++H LC    LDEA  L    ++ G  L+ V
Sbjct: 250 NWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETV 309

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID----- 311
           +Y +LI GY          K+   M+ + I P   TY  +I G  +SG  E+ +      
Sbjct: 310 TYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDI 369

Query: 312 --------------MLNELLQSGMIP----------------DETTFNTIIHGFCSEGQV 341
                         +LN L + G++                 D   ++ +IHG+C  G++
Sbjct: 370 LDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEI 429

Query: 342 EKALQFHNKM-VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           E+AL+  + M   +   P  +    +L GLC++G+L +A  +  +  +K +  D V YN 
Sbjct: 430 ERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNV 489

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK--------- 451
           +I    K   + +A GL  ++    + P   T  +I     + G L+ A+          
Sbjct: 490 VIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISS 549

Query: 452 -------FTSIM---VETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
                  +T++M    E GK+N  ++        + I P++I+YS  I   C + R+ DA
Sbjct: 550 LLPTMVTYTTLMDALSEAGKVN-TMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDA 608

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGL 527
           +   +    +G+  +  TY  L+ G 
Sbjct: 609 IHFLDNMHGEGVNADPVTYNTLIQGF 634



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 121/244 (49%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  VTY T++DAL + GK+N +  +L +M ++G+ PN  TY++++ G CK     +A+ 
Sbjct: 551 LPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIH 610

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
            +D M       D  TYN LI G+C    ++ AF +   M    ++P  VTYN LIN   
Sbjct: 611 FLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLC 670

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
             G+ ++A  L++ L E GI+     +  +IK  C +G   +A  +   + ++GF     
Sbjct: 671 LKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVK 730

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            ++  I+  CK    +EA   +  M   G+  +T     ++  L   K+L    +L   A
Sbjct: 731 DFSAAINRLCKRKFAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKELFYLPLLHALA 790

Query: 247 SKRG 250
            K G
Sbjct: 791 VKTG 794


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 219/411 (53%), Gaps = 3/411 (0%)

Query: 3   GFGCLPDNVT---YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG 59
             G  P +V+    + ++D L K G++++ R LL DM + G+  N   YN L+  Y +  
Sbjct: 167 ALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQK 226

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
                  ++++M        V TY +L++    A  + +   L  EM++  ++ DV  Y 
Sbjct: 227 DDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYT 286

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            +IN +  +G    A K++DE   +G++PN  T+ ++I  +CK G+++ A  ++ +M+  
Sbjct: 287 AVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 346

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G   + + +NT+ID  C+ G +++A ++   M + G++++  T NT+   LC   +LDEA
Sbjct: 347 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 406

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL+   + G   + V+Y TLI+ + +D     A +L+ EM E+   PS  TYN MI G
Sbjct: 407 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDG 466

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            ++ G   +A     E+ + G +PD  T+ +++HG C  G+V+ AL+   +M ++  +P+
Sbjct: 467 YTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPN 526

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           +V    L+SGL +EG  E A + +   +  G   D   Y+ L+ SL  + R
Sbjct: 527 VVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 196/379 (51%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           +++++G C +G +++A RL  +M    +  + + YN+L++ +          ++++ ++ 
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            GI+    T+ I++        I K   +   M+ N    D   Y  +I+A C+AGNM  
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A +++D     G++ N  T   +++  C   +++ A MLL     +G  L+++ + T+I 
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           GY R    + ALK+   M++  +    +TYN +  GL +  + ++A  +L+ +++ G++P
Sbjct: 361 GYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP 420

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           +  T+ T+I   C +G + +A +   +M EK   P +VT N+++ G  ++G + +A +F 
Sbjct: 421 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFR 480

Query: 384 RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
           +    KG   D  TY +L+   C   +++ A  L  EM+++   P+   Y A+ + L + 
Sbjct: 481 KEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKE 540

Query: 444 GRLEEAQKFTSIMVETGKI 462
           GR E A +    M++ G I
Sbjct: 541 GRSEAAFQLYDDMLKAGLI 559



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 193/409 (47%), Gaps = 22/409 (5%)

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVT---HNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           +GR  +A  L++     G  P +V+    ++++   CK G++D A +++ +M  +G S +
Sbjct: 154 AGRLADAAGLLER--ALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLN 211

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            + YN+L+D   +  +      ++++M  +G++    T   ++ +L   + + +   L N
Sbjct: 212 ALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFN 271

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                    D   Y  +I  Y R     RA K+ DE     + P+  TY  +I G  + G
Sbjct: 272 EMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIG 331

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A  +L ++   G+  ++  FNT+I G+C +G V+ AL+    M +   + DI T N
Sbjct: 332 QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYN 391

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L  GLCR   L++A       I  G   + VTY TLIS  CK+  + +A  L  EM EK
Sbjct: 392 TLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEK 451

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P   TY  +     + G + EA++F   M + G +                 P   +
Sbjct: 452 GATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFV-----------------PDVYT 494

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           Y+  ++ HC  G+   AL++FEE +Q+G   N   Y  L++GL K  +S
Sbjct: 495 YASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 543


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 221/442 (50%), Gaps = 8/442 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D+ TY  ++  L    ++ E   LL  +K +GL PN   YN L+   C  G 
Sbjct: 145 MMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNG- 203

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +  R   LM + K   DV T+N+LI G+C      +A  L ++  SL  +PDVVT   
Sbjct: 204 --KVGRARSLMNEIKEPNDV-TFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTK 260

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++      GR  EA ++++ ++  G   + V HN +IK +CK GK+     +++ ME  G
Sbjct: 261 VVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKG 320

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN LI   C++G +E A  M + M   G+  N +T +T++  L    + ++ +
Sbjct: 321 CLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGF 380

Query: 241 MLLNSASK-RGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            +L    + RG     +S Y +++ G +R    N AL+    MK   + P     +  I 
Sbjct: 381 KILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFL--MKMENLFPRAVDRSLRIL 438

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  + G  ++A  + +++   G IP    ++ +IHGFC EG V +AL+  N+MV   + P
Sbjct: 439 GFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFP 498

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
              T N L+SG CR G    ALK     + +G   D+ +Y+ LI +LC+++  + A  LL
Sbjct: 499 VASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLL 558

Query: 419 SEMEEKKLGPDRYTYAAIHTAL 440
            +M E  + PD   + ++   L
Sbjct: 559 LQMVENGITPDYLIWNSLFHCL 580



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 211/406 (51%), Gaps = 8/406 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ V YNT+L AL   GK+   R L++++K+    PN  T+N+L+ GYCK     +A
Sbjct: 184 GLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYCKEDNFVQA 239

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +++       +PDV T   ++   CN G + EA  + + +ES   + DVV +NTLI  
Sbjct: 240 LVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKG 299

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+      L+ E++  G  PNA T+N +I  +C+ G ++ A  +  +M+ +G + +
Sbjct: 300 FCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCN 359

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTIT-LNTILHTLCCEKKLDEAYML 242
            VT++TLI      G  E+ F+++++M   +G+   +I+  N++L+ L  +  L+EA   
Sbjct: 360 FVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEF 419

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L        +   V     I G+  +     A +++D+M     +PS   Y+ +I G  Q
Sbjct: 420 L--MKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQ 477

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G   +A++++NE++  G  P  +TFN +I GFC  G+   AL+    MV +   PD  +
Sbjct: 478 EGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGS 537

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            + L+  LCR+   +KA       +  G   D + +N+L   L ++
Sbjct: 538 YSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLSQQ 583



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 233/520 (44%), Gaps = 75/520 (14%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           TY  ++  L    + + V+ LL +M K  GL P+ + +  ++ G  +   +++ ++V+DL
Sbjct: 50  TYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDL 109

Query: 71  MTQ---NKSLP--------------------------------DVWTYNMLINGWCNAGM 95
           +T+   N SL                                 D +TY +L+ G C    
Sbjct: 110 VTRYGKNPSLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNR 169

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + E F+L + ++S  L P+VV YNTL++    +G+   A  L++E+ E    PN VT N+
Sbjct: 170 IGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNV 225

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  YCKE    +A  ++      GF PD VT   +++  C  G + EA  +++ +  KG
Sbjct: 226 LICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKG 285

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
             ++ +  NT++   C   K+   + LL    ++G   +  +Y  LI+G+        AL
Sbjct: 286 GVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESAL 345

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI------------------------- 310
            ++++MK   I  +  T++ +I GL   G+TE                            
Sbjct: 346 DMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLY 405

Query: 311 -----DMLNELLQ-----SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                +MLNE L+       + P     +  I GFC EG +++A + +++M  +   P  
Sbjct: 406 GLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSA 465

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  + L+ G C+EG + +AL+     +  G    + T+N LIS  C+  +   A  LL +
Sbjct: 466 LVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLED 525

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  +   PD  +Y+ +  AL      ++A      MVE G
Sbjct: 526 MVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENG 565



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 209/485 (43%), Gaps = 45/485 (9%)

Query: 66  RVVDLMTQNKSLPDV-----W------------TYNMLINGWCNAGMLEEAFRLRKEM-E 107
           R+V L+   KS P       W            TY  LI+             L  EM +
Sbjct: 17  RIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPK 76

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
           S+ L PD   + T+I     +    +  K++D +  +G  P+    N ++    KE  ID
Sbjct: 77  SIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKE-DID 135

Query: 168 KACKIVRN-MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            A K  R  M   G   D  TY  L+   C    + E F+++ V+  +GLK N +  NT+
Sbjct: 136 LARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTL 195

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           LH LC   K+  A  L+N   +     ++V++  LI GY +++   +AL L ++      
Sbjct: 196 LHALCNNGKVGRARSLMNEIKEP----NDVTFNVLICGYCKEDNFVQALVLLEKSFSLGF 251

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           +P   T   ++  L   G+  +A+++L  +   G + D    NT+I GFC  G+V+    
Sbjct: 252 VPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHG 311

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              +M  K   P+  T N L+SG C  G+LE AL  F      G   + VT++TLI  L 
Sbjct: 312 LLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLF 371

Query: 407 KERRLEDAFGLLSEMEEKK--LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
              R ED F +L  MEE +   G     Y ++   L     L EA +F   M        
Sbjct: 372 SRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKM-------- 423

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                      E + P ++  S +I   C +G  ++A +++++   +G   +   Y  L+
Sbjct: 424 -----------ENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLI 472

Query: 525 NGLIK 529
           +G  +
Sbjct: 473 HGFCQ 477


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 263/562 (46%), Gaps = 57/562 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D V Y  ++D LFK G L E       + +   VPN  TY  LV G CK G L  A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +   +P+V TY+ +ING+   GMLEEA  L ++ME   ++P+  TY T+I+ 
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++G+   A +L  E+   G++ N    + ++    + G+I +   +V++M   G + D
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL--DEAYML 242
            + Y +LID   K G+ E A    + M  +G+  + ++ N ++  +    K+  D AY  
Sbjct: 504 QINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-- 561

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                ++G   D  ++  ++    +   +   LKLWD+MK   I PS  + N ++  L +
Sbjct: 562 -KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTF---------------------------------- 328
           +GK E+AI +LN+++   + P+ TT+                                  
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680

Query: 329 -NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            NT+I   C  G  +KA      M  + F PD VT N L+ G      + KAL  +   +
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G + +  TYNT+I  L     +++    LSEM+ + + PD +TY A+ +   + G ++
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            +      M+  G +                 P + +Y+  I+E  + G+   A ++ +E
Sbjct: 801 GSMTIYCEMIADGLV-----------------PKTSTYNVLISEFANVGKMLQARELLKE 843

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
             ++G++ N STY  +++GL K
Sbjct: 844 MGKRGVSPNTSTYCTMISGLCK 865



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 266/574 (46%), Gaps = 58/574 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M GF   PD VT+++I++ L K GK+ E   LL +M++  + PN  TY  LV    K   
Sbjct: 252 MSGFD--PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+ +   M       D+  Y +L++G   AG L EA +  K +     +P+VVTY  
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++G    A  +I ++ E  + PN VT++ MI  Y K+G +++A  ++R ME+  
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY T+ID   KAG  E A  +   M   G++ N   L+ +++ L    ++ E  
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     +G  LD+++Y +LI  +F+      AL   +EM+ER +     +YN +I G+
Sbjct: 490 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 549

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK   A      + + G+ PD  TFN +++    +G  E  L+  +KM     KP +
Sbjct: 550 LKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 608

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL------------------KGKAVDSV------ 396
           ++CNI++  LC  G +E+A+      +L                  K K  D++      
Sbjct: 609 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 668

Query: 397 -----------TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                       YNTLI++LCK    + A  ++ +ME +   PD  T+ ++         
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNT-------SKTPEEID------------PSSISYS 486
           + +A    S+M+E G I+  V   NT       +   +E+D            P   +Y+
Sbjct: 729 VRKALSTYSVMMEAG-ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             I+     G  K ++ I+ E    G+    STY
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTY 821



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 273/537 (50%), Gaps = 33/537 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKL-NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           FG +PD+  +N+++      G + ++V  + S M   G+ P+    N+L+  +CK+G L 
Sbjct: 87  FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 146

Query: 63  EAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            A+ ++    +N+ +  D  TYN +I+G C  G+ +EA++   EM  + +LPD V+YNTL
Sbjct: 147 FAISLL----RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 202

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ F + G  + A  L+DE+ E     N +TH I++  Y     I++A    R+M  +GF
Sbjct: 203 IDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIEEA---YRDMVMSGF 255

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VT++++I+  CK G + E   ++  M    +  N +T  T++ +L        A  
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +    RG  +D V Y  L+ G F+      A K +  + E   +P+  TY A++ GL 
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G    A  ++ ++L+  +IP+  T++++I+G+  +G +E+A+    KM +++  P+  
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T   ++ GL + G  E A++  +   L G   ++   + L++ L +  R+++  GL+ +M
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             K +  D+  Y ++     + G  E A  +   M E G              P ++   
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG-------------MPWDV--- 539

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            +SY+  I+     G+   A   ++  R+KGI  + +T+  +MN   +R++  S+ +
Sbjct: 540 -VSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNS--QRKQGDSEGI 592



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 236/501 (47%), Gaps = 51/501 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGK----------------------------------- 25
           ME    +P+  TY T++D LFK GK                                   
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP-DVWTYN 84
           + EV+ L+ DM  +G+  ++  Y  L+  + K G  + A+   + M Q + +P DV +YN
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM-QERGMPWDVVSYN 543

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           +LI+G    G +   +   K M    + PD+ T+N ++N   + G S    KL D++   
Sbjct: 544 VLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           GIKP+ ++ NI++   C+ GK+++A  I+  M      P+  TY   +D + K    +  
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           F+  + +   G+K++    NT++ TLC      +A M++     RG+  D V++ +L+ G
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           YF      +AL  +  M E  I P+  TYN +I GLS +G  ++    L+E+   GM PD
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           + T+N +I G    G ++ ++  + +M+     P   T N+L+S     G + +A +  +
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842

Query: 385 SWILKGKAVDSVTYNTLISSLC------------KERRLEDAFGLLSEM-EEKKLGPDRY 431
               +G + ++ TY T+IS LC            K   L +A GLL EM EEK   P   
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQ 902

Query: 432 TYAAIHTALVESGRLEEAQKF 452
           T   I  A  + G   +A++F
Sbjct: 903 TIYWISAAFSKPGMKVDAERF 923



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 263/552 (47%), Gaps = 42/552 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD V+YNT++D   K G     + L+ ++ +  L+    T+ IL+S Y  L  
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHA 242

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R    M  +   PDV T++ +IN  C  G + E   L +EME + + P+ VTY T
Sbjct: 243 IEEAYRD---MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 299

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  F++     A  L  ++   GI  + V + +++    K G + +A K  + + E+ 
Sbjct: 300 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  L+D  CKAG++  A  ++  M  K +  N +T +++++    +  L+EA 
Sbjct: 360 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 419

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +    +  +YGT+I G F+  K   A++L  EM+   +  + +  +A++  L
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 479

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ ++   ++ +++  G+  D+  + ++I  F   G  E AL +  +M E+    D+
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539

Query: 361 VTCNILLSGLCREGIL--EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           V+ N+L+SG+ + G +  + A K  R    KG   D  T+N +++S  K+   E    L 
Sbjct: 540 VSYNVLISGMLKFGKVGADWAYKGMRE---KGIEPDIATFNIMMNSQRKQGDSEGILKLW 596

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            +M+   + P   +   +   L E+G++EEA    + M+         + PN +     +
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM------LMEIHPNLTTYRIFL 650

Query: 479 DPSS---------------ISYSEKINEH---------CSQGRYKDALQIFEETRQKGIA 514
           D SS               +SY  K++           C  G  K A  +  +   +G  
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710

Query: 515 INKSTYMNLMNG 526
            +  T+ +LM+G
Sbjct: 711 PDTVTFNSLMHG 722



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 222/480 (46%), Gaps = 39/480 (8%)

Query: 71  MTQNKSLPD---------VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +TQ +  PD         V  ++ L   + +   L  A R    M +  ++PD   +N+L
Sbjct: 40  ITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSL 99

Query: 122 INRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I++F  +G   +   LI  ++   G+ P+    N++I  +CK G++  A  ++RN     
Sbjct: 100 IHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RV 156

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D VTYNT+I   C+ G  +EA++ +  M + G+  +T++ NT++   C       A 
Sbjct: 157 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 216

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++  S+    L+ +++  L++ Y+       A   + +M      P   T++++I  L
Sbjct: 217 ALVDEISE----LNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRL 269

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK  +   +L E+ +  + P+  T+ T++           AL  +++MV +    D+
Sbjct: 270 CKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDL 329

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V   +L+ GL + G L +A K F+  +   +  + VTY  L+  LCK   L  A  ++++
Sbjct: 330 VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQ 389

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M EK + P+  TY+++    V+ G LEEA           K+  Q V PN          
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR------KMEDQNVVPN---------- 433

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL--IKRRKSISKAV 538
              +Y   I+     G+ + A+++ +E R  G+  N      L+N L  I R K +   V
Sbjct: 434 -GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLV 492


>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
 gi|238006488|gb|ACR34279.1| unknown [Zea mays]
 gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
          Length = 462

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 210/412 (50%), Gaps = 4/412 (0%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N+ ++  C+ GWL  A  V+    +    PDV TYN L+  +C    L+    +   M  
Sbjct: 16  NVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMRE 75

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + PD VTYN+LI     SG ++ A  L DE+   G+ P++ ++N ++    + G  + 
Sbjct: 76  AGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEH 135

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A ++  +M + G +P   TYNTL+D   KAG++  AFRM   + R GL +  +T NT+++
Sbjct: 136 AYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVTYNTMIN 195

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   K+  A M+L    +  +  + V+Y T++   FR  +  + L+ +  + E   + 
Sbjct: 196 GLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYIS 255

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
             F Y  +I  L + G+ ++A      ++QSG   D   +NT+IH  C EG++  A +  
Sbjct: 256 DAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDAFELL 315

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N M E   + D  T +IL++GLC+ G +E A K   S  + G   + V YN LI +LCK 
Sbjct: 316 NMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVVAYNCLIDALCKC 375

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             ++ A  +L  M+ K    D ++Y ++   L + GR   A KF  I +  G
Sbjct: 376 HEVDAAIKILHSMKLK----DDFSYTSLVHGLCKVGRYHMASKFLRICLHEG 423



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 191/402 (47%), Gaps = 4/402 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VTYNT+L A  +   L+    ++  M++ G+ P+  TYN L++G  + G    
Sbjct: 41  LGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGVRPDAVTYNSLITGADRSGLTVR 100

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ + D M ++   PD W+YN L++    +G  E A+R+  +M    + P   TYNTL++
Sbjct: 101 ALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLD 160

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              ++G    AF++   L   G+    VT+N MI   CK GK+  A  +++ +     +P
Sbjct: 161 GLLKAGHVTNAFRMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAP 220

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTY T++    + G  E+       +   G   +     T++  L  + ++ EA    
Sbjct: 221 NAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYC 280

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G  LD   Y TLI    ++ K N A +L + M+E  +    +T++ ++ GL + 
Sbjct: 281 ELMIQSGSTLDNACYNTLIHLRCQEGKINDAFELLNMMEEGGLESDEYTFSILVNGLCKM 340

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E A   +  +   GM  +   +N +I   C   +V+ A++  + M  K    D  + 
Sbjct: 341 GQIEAAEKQIWSMEMMGMQSNVVAYNCLIDALCKCHEVDAAIKILHSMKLK----DDFSY 396

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
             L+ GLC+ G    A KF R  + +G  V +     +IS L
Sbjct: 397 TSLVHGLCKVGRYHMASKFLRICLHEGNNVLASAKRAVISGL 438



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 4/347 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++    + G      DL  +M + G+ P+  +YN L+    + G 
Sbjct: 73  MREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGH 132

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A RV   M      P   TYN L++G   AG +  AFR+ + ++   L   +VTYNT
Sbjct: 133 PEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVTYNT 192

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   +SG+   A  ++ EL      PNAVT+  ++K   + G+ ++  +   ++ E G
Sbjct: 193 MINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGG 252

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D   Y T+I A  K G M+EA    ++M + G  ++    NT++H  C E K+++A+
Sbjct: 253 YISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDAF 312

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   + G   DE ++  L+ G  +  +   A K    M+   +  +   YN +I  L
Sbjct: 313 ELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVVAYNCLIDAL 372

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            +  + + AI    ++L S  + D+ ++ +++HG C  G+   A +F
Sbjct: 373 CKCHEVDAAI----KILHSMKLKDDFSYTSLVHGLCKVGRYHMASKF 415



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 52/355 (14%)

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           V  R  L ++T  +N  L +LC    LD A  +L  A + G   D V+Y TL+  Y R +
Sbjct: 2   VRSRGHLALSTRLMNVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVD 61

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             +  L +   M+E  + P   TYN++I G  +SG T +A+D+ +E+L+SG+ PD  ++N
Sbjct: 62  GLDAGLAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYN 121

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            ++H     G  E A +    M ++   P   T N LL GL + G +  A + FR     
Sbjct: 122 ALMHCLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRA 181

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP--------------------- 428
           G  V  VTYNT+I+ LCK  ++  A  +L E+   +  P                     
Sbjct: 182 GLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQG 241

Query: 429 --------------DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
                         D + Y  + +ALV+ GR++EA  +  +M+++G              
Sbjct: 242 LETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSG-------------- 287

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +D +   Y+  I+  C +G+  DA ++     + G+  ++ T+  L+NGL K
Sbjct: 288 -STLDNA--CYNTLIHLRCQEGKINDAFELLNMMEEGGLESDEYTFSILVNGLCK 339



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 127/264 (48%), Gaps = 22/264 (8%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           ST   N  +  L + G  ++A  +L + ++ G+ PD  T+NT++  +C    ++  L   
Sbjct: 11  STRLMNVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVV 70

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M E   +PD VT N L++G  R G+  +AL  F   +  G A DS +YN L+  L + 
Sbjct: 71  HRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRS 130

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF---------------- 452
              E A+ + ++M ++ + P   TY  +   L+++G +  A +                 
Sbjct: 131 GHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVTY 190

Query: 453 -TSI--MVETGKINH-QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
            T I  + ++GK+ + ++V     +T  E  P++++Y+  +      GR++  L+ F   
Sbjct: 191 NTMINGLCKSGKVGYARMVLKELGRT--EHAPNAVTYTTVMKCCFRYGRFEQGLETFLSL 248

Query: 509 RQKGIAINKSTYMNLMNGLIKRRK 532
            + G   +   Y  +++ L+K+ +
Sbjct: 249 LEGGYISDAFPYTTVISALVKKGR 272


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 188/332 (56%)

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G L+E  R ++ M     +PD+     LI G+C  G   +A R+ + +E    +PDV+TY
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI+    +GR M+A KL+ ++   G  P+ VT NI+I + C++G + +A  ++  M +
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G +P+ ++YN L+   CK   ME A   +  M  +G   + +T NT+L  LC + K+D 
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  LLN  S +G     ++Y T+I G  +  K ++A KL DEM+ + + P   TY++++ 
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVG 337

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GLS+ GK ++AI   ++L   G+ P+  T+N I+ G C   + ++A+ F   MV++  KP
Sbjct: 338 GLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKP 397

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKG 390
              +  IL+ GL  EG+ ++AL+      L+G
Sbjct: 398 TEASYTILIEGLAYEGLAKEALELLNELCLRG 429



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 197/343 (57%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           + +  N  L  L + G+L E    L  M  +G +P+      L+ G+CK+G  ++A R++
Sbjct: 83  EEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIM 142

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           +++  + ++PDV TYN+LI+G C+ G   +A +L  +M      P VVT+N LIN     
Sbjct: 143 EIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRK 202

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G    A  +++++ +HG  PN++++N ++  +CKE K+++A + +  M   G  PD VTY
Sbjct: 203 GLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTY 262

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTL+ A CK G ++ A  +++ +  KG     IT NT++  L    K D+A  LL+    
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRA 322

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D ++Y +L+ G  R+ K + A+K + +++   + P+  TYNA++ GL ++ KT++
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDR 382

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           AID L  ++Q G  P E ++  +I G   EG  ++AL+  N++
Sbjct: 383 AIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 188/328 (57%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           G LEE FR  + M     +PD++   +LI  F + G++ +A ++++ +++ G  P+ +T+
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N++I   C  G+   A K++ +M   G SP  VT+N LI+  C+ G +  A  +++ M +
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
            G   N+++ N +LH  C EKK++ A   L   + RG Y D V+Y TL+T   +D K + 
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A++L +++  +   P   TYN +I GLS+ GKT+QA  +L+E+   G+ PD  T+++++ 
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVG 337

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G   EG+V++A++F + +     KP+ +T N ++ GLC+    ++A+ F    + +G   
Sbjct: 338 GLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKP 397

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEM 421
              +Y  LI  L  E   ++A  LL+E+
Sbjct: 398 TEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 179/331 (54%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N  +++   +G   E F+ ++ +   G  P+ +    +I+ +CK GK  KA +I+  +E+
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G  PD +TYN LI   C  G   +A +++  M R+G   + +T N +++ LC +  L  
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  +L    K G   + +SY  L+ G+ +++K  RA++   +M  R   P   TYN ++ 
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L + GK + A+++LN+L   G  P   T+NT+I G    G+ ++A +  ++M  K  KP
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           DI+T + L+ GL REG +++A+KFF    + G   +++TYN ++  LCK R+ + A   L
Sbjct: 328 DIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL 387

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           + M ++   P   +Y  +   L   G  +EA
Sbjct: 388 AYMVQRGCKPTEASYTILIEGLAYEGLAKEA 418



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 173/318 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +   +++    K GK  +   ++  ++  G VP+  TYN+L+SG C  G   +A
Sbjct: 114 GDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDA 173

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +++  M +    P V T+N+LIN  C  G+L  A  + ++M      P+ ++YN L++ 
Sbjct: 174 EKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHG 233

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +   A + + ++   G  P+ VT+N ++   CK+GK+D A +++  +   G SP 
Sbjct: 234 FCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPV 293

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNT+ID   K G  ++A +++D M  KGLK + IT ++++  L  E K+DEA    +
Sbjct: 294 LITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFH 353

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   + ++Y  ++ G  +  K +RA+     M +R   P+  +Y  +I GL+  G
Sbjct: 354 DLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEG 413

Query: 305 KTEQAIDMLNELLQSGMI 322
             ++A+++LNEL   G++
Sbjct: 414 LAKEALELLNELCLRGVV 431



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 155/287 (54%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G +PD +TYN ++  +   G+  +   LL+DM ++G  P+  T+NIL++  C+ G 
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A+ V++ M ++   P+  +YN L++G+C    +E A     +M S    PD+VTYNT
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    + G+   A +L+++L   G  P  +T+N +I    K GK D+A K++  M   G
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD +TY++L+    + G ++EA +    +   G+K N IT N I+  LC  +K D A 
Sbjct: 325 LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAI 384

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             L    +RG    E SY  LI G   +  A  AL+L +E+  R ++
Sbjct: 385 DFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVV 431



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 164/331 (49%), Gaps = 17/331 (5%)

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           + G +EE FR ++ M  +G   + I   +++   C   K  +A  ++      G   D +
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  LI+G     +   A KL  +M  R   PS  T+N +I  L + G   +AID+L ++
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            + G  P+  ++N ++HGFC E ++E+A+++  KM  +   PDIVT N LL+ LC++G +
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
           + A++       KG +   +TYNT+I  L K  + + A  LL EM  K L PD  TY+++
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSL 335

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L   G+++EA KF   +   G                 + P++I+Y+  +   C   
Sbjct: 336 VGGLSREGKVDEAIKFFHDLEVLG-----------------VKPNAITYNAIMLGLCKAR 378

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +   A+       Q+G    +++Y  L+ GL
Sbjct: 379 KTDRAIDFLAYMVQRGCKPTEASYTILIEGL 409



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 177/358 (49%), Gaps = 18/358 (5%)

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           + G++++  + + +M   G  PD +   +LI   CK G   +A R+M+++   G   + I
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N ++  +C   +  +A  LL    +RG     V++  LI    R     RA+ + ++M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
            +    P++ +YN ++ G  +  K E+AI+ L ++   G  PD  T+NT++   C +G+V
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           + A++  N++  K   P ++T N ++ GL + G  ++A K       KG   D +TY++L
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSL 335

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           +  L +E ++++A     ++E   + P+  TY AI   L ++ + + A  F + MV+ G 
Sbjct: 336 VGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRG- 394

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
                             P+  SY+  I     +G  K+AL++  E   +G+ + KS+
Sbjct: 395 ----------------CKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV-VKKSS 435



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 18/319 (5%)

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           I  N  L  L    +L+E +  L S   RG   D +   +LI G+ +  K  +A ++ + 
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           +++   +P   TYN +I G+  +G+   A  +L ++++ G  P   TFN +I+  C +G 
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           + +A+    KM +    P+ ++ N LL G C+E  +E+A+++      +G   D VTYNT
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+++LCK+ +++ A  LL+++  K   P   TY  +   L + G+ ++A K    M   G
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                            + P  I+YS  +     +G+  +A++ F +    G+  N  TY
Sbjct: 325 -----------------LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITY 367

Query: 521 MNLMNGLIKRRKSISKAVD 539
             +M GL K RK+  +A+D
Sbjct: 368 NAIMLGLCKARKT-DRAID 385



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 75/154 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  +TYNT++D L K GK ++   LL +M+ +GL P+  TY+ LV G  + G + EA
Sbjct: 289 GCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEA 348

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++    +      P+  TYN ++ G C A   + A      M      P   +Y  LI  
Sbjct: 349 IKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEG 408

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
               G + EA +L++EL   G+   +    + ++
Sbjct: 409 LAYEGLAKEALELLNELCLRGVVKKSSAEKVAVR 442


>gi|449467965|ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449468117|ref|XP_004151768.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449532400|ref|XP_004173169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 216/438 (49%), Gaps = 4/438 (0%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  + +  K  ++ +   ++ D  + G++P+  TYN L+ GYC+   +  A  V+  M +
Sbjct: 11  NICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMRE 70

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               PDV TYN LI G      LE++  L +EM    + PD+ +YNTL++ FF  G+  E
Sbjct: 71  AGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDE 130

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A+++  ++    + P+ VT N MI   CK G    A  + RN++ +GF P  VTYN LI+
Sbjct: 131 AYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILIN 190

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
             CK   +  A RM++     GL+ N +T  T++ +    ++ +  + + +    +GY  
Sbjct: 191 GLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAF 250

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
           D  +Y T+   + +  +   A    ++M +  +      YN  I    + GK E A  + 
Sbjct: 251 DGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLF 310

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           +E+   G+  D  T + I +G C  G +E A+Q  N +    F  ++V  N L+  LC+ 
Sbjct: 311 DEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKA 370

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G +++A++ F S     +  DS TY +L+ +LCK RR   A  LL       +   + T 
Sbjct: 371 GQIDRAIRLFESM----ETRDSFTYTSLVHNLCKARRFRCASKLLISCSRDGMKVLKATR 426

Query: 434 AAIHTALVESGRLEEAQK 451
            A+   L  SG   EA+K
Sbjct: 427 RAVIDGLCSSGFTSEARK 444



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 199/417 (47%), Gaps = 27/417 (6%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N  +  F +S +  +A  +I +    G+ P+ VT+N +I  YC+   +D A  ++  M E
Sbjct: 11  NICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMRE 70

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G SPD +TYN+LI    +  ++E++  + + M + G+  +  + NT++H      K DE
Sbjct: 71  AGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDE 130

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           AY +      +      V++ T+I G  +    + A+ L+  ++    +P   TYN +I 
Sbjct: 131 AYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILIN 190

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL +  +   AI MLNE + SG+ P+  T+ T++       Q E+  +  +KM  K +  
Sbjct: 191 GLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAF 250

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGK-AVDSVTYNTLISSLCKERRLEDAFGL 417
           D      +     + G  E+A KF    ++K    +D   YNT I+  CKE +LE A+ L
Sbjct: 251 DGFAYCTVSGAFLKLGRFEEA-KFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKL 309

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
             E+E + L  D YT++ I   L   G +E A +  + +  TG  ++ V           
Sbjct: 310 FDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLV----------- 358

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFE--ETRQKGIAINKSTYMNLMNGLIKRRK 532
                 + +  I+  C  G+   A+++FE  ETR      +  TY +L++ L K R+
Sbjct: 359 ------ALNCLIDRLCKAGQIDRAIRLFESMETR------DSFTYTSLVHNLCKARR 403



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 170/347 (48%), Gaps = 4/347 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  +YNT++   F  GK +E   +  D+  + L P+  T+N +++G CK G+   A
Sbjct: 107 GITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNA 166

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +   + ++  +P + TYN+LING C    L  A R+  E     L P+ VTY TL+  
Sbjct: 167 IMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKS 226

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F S +    F++  ++   G   +   +  +   + K G+ ++A   +  M +N    D
Sbjct: 227 CFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGID 286

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              YNT I+  CK G +E A+++ D +  +GL+ +  T + I + LC    ++ A   LN
Sbjct: 287 ITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLN 346

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+  + V+   LI    +  + +RA++L++ M+ R     +FTY +++  L ++ 
Sbjct: 347 CVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFESMETRD----SFTYTSLVHNLCKAR 402

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           +   A  +L    + GM   + T   +I G CS G   +A +   K+
Sbjct: 403 RFRCASKLLISCSRDGMKVLKATRRAVIDGLCSSGFTSEARKLKFKL 449



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 18/331 (5%)

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           K +T  LN  + + C  +++ +A  ++    + G   D V+Y TLI GY R    + A  
Sbjct: 4   KYSTKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYS 63

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           +   M+E  I P   TYN++I G +++   EQ++D+  E+LQSG+ PD  ++NT++H F 
Sbjct: 64  VLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFF 123

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G+ ++A +    ++ K   P  VT N +++GLC+ G    A+  FR+    G     V
Sbjct: 124 ILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLV 183

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN LI+ LCK  RL  A  +L+E  +  L P+  TY  +  +   S + E   +  S M
Sbjct: 184 TYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKM 243

Query: 457 VETGKINHQVVQPNTSKT------------------PEEIDPSSISYSEKINEHCSQGRY 498
              G           S                      ++      Y+  IN +C +G+ 
Sbjct: 244 KNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKL 303

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           + A ++F+E   +G+  +  T+  + NGL +
Sbjct: 304 EAAYKLFDEIEPRGLECDVYTHSIITNGLCR 334


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 213/405 (52%), Gaps = 3/405 (0%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+ ++ N L++G      +  A +      + +  PD++T+N +I+G C  G L +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK---LIDELDEHGIKPNAVTHNIMIKW 159
            K++++  L P V TYN+LI+ + + G +   +    L+ E+ E GI P AVT  ++I  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           YCK      A ++   M++ G +   VTYN+LI   C  G +EE  ++M+ M   GL  N
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            IT   +L   C +  + +A   ++  ++R    D V Y  LI  Y R  K   A+ + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M ++ I P+  TYN +I G S+SG    A  +L+E+ + G+  D  T+N +I   C +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           +V KA++  ++M E   +P+ +T N ++ G C +G ++ A +         K  + VTYN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             I   C+  ++++A  LL+EM +K L P+  TY  I   ++E G
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 197/398 (49%), Gaps = 40/398 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+NT++  L + G+L +  D+  D+K  GL P+  TYN L+ GYCK G     M  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGN-MYH 247

Query: 68  VDL----MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           VD+    M +    P   T+ +LING+C       A R+ +EM+   +   VVTYN+LI+
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G+  E  KL++E+++ G+ PN +T   ++K +CK+G +  A   +  M E    P
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V YN LID   + G ME+A  + + M +KG+  N  T                     
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT--------------------- 406

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                         Y  LITG+ R      A  L DEMKE+ I     TYN +I  L   
Sbjct: 407 --------------YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A+ +L+E+ + G+ P+  T+NTII GFC +G ++ A +   +M +   + ++VT 
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           N+ +   C+ G +++A       + K    + +TY T+
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 195/368 (52%), Gaps = 19/368 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKG---KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           ++ +G  P   TYN+++D   KKG    +  V  LL +M + G+ P   T+ +L++GYCK
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
                 A+RV + M Q      V TYN LI+G C+ G +EE  +L +EME L L P+ +T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +  ++  F + G   +A   ID + E  ++P+ V +NI+I  Y + GK++ A  +   M 
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G SP+  TYN LI    ++G+   A  ++D M  KG++ + +T N ++  LCC+ ++ 
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVR 456

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL+  S+ G   + ++Y T+I G+        A ++   M++ +   +  TYN  I
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFI 516

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               Q GK ++A D+LNE+L   ++P+  T+ TI  G                M+EK + 
Sbjct: 517 KYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MMEKGYT 560

Query: 358 PDIVTCNI 365
           PDI  C +
Sbjct: 561 PDIRGCTV 568



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 196/395 (49%), Gaps = 13/395 (3%)

Query: 72  TQNKSLPDVWTYNMLINGWCNA---GMLEEAFR--LRKEMESLKLLPDVVTYNTLINRFF 126
           +  +  P   + N L+ G   A    + E+AFR  LR+ +      PD+ T+NT+I+   
Sbjct: 148 SHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS-----PDIYTFNTVISGLC 202

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI---VRNMEENGFSP 183
             G+  +A  +  ++   G+ P+  T+N +I  YCK+G       +   ++ M E G SP
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VT+  LI+  CK  N   A R+ + M ++G+  + +T N+++  LC E K++E   L+
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   +E+++G ++ G+ +      A    D M ER + P    YN +I    + 
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK E A+ +   + + G+ P+ TT+N +I GF   G    A    ++M EK  + D+VT 
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+L+  LC +G + KA+K        G   + +TYNT+I   C +  ++ A+ + + ME+
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +   +  TY        + G+++EA    + M++
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 24/406 (5%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           + R  +  R+ +AF L  E      +P+  + N ++       ++D A K  R+      
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRH-RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRV 187

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
           SPD  T+NT+I   C+ G + +A  +   +   GL  +  T N+++   C +      Y 
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 241 --MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
             MLL    + G     V++G LI GY ++     A+++++EMK++ I  S  TYN++I 
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL   GK E+ + ++ E+   G+ P+E TF  ++ GFC +G +  A  + + M E++ +P
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+V  NIL+    R G +E A+    +   KG + +  TYN LI+   +      A GLL
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM+EK +  D  TY  +  AL   G + +A K    M E G                 +
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG-----------------L 470

Query: 479 DPSSISYSEKINEHCSQGRYKDALQI---FEETRQKGIAINKSTYM 521
           +P+ ++Y+  I   C +G  K A +I    E+ R++   +  + ++
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFI 516



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 25/295 (8%)

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A++L   +  R +     S   L+ G    ++ + A K +     R++ P  +T+N +I
Sbjct: 140 DAFLLAGESHPR-HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVI 198

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH-----NKMV 352
            GL + G+  +A D+  ++   G+ P   T+N++I G+C +G       +H      +MV
Sbjct: 199 SGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGN--MYHVDMLLKEMV 256

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           E    P  VT  +L++G C+      A++ F     +G A   VTYN+LIS LC E ++E
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +   L+ EME+  L P+  T+  +     + G + +A  +   M E              
Sbjct: 317 EGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE-------------- 362

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                ++P  + Y+  I+ +   G+ +DA+ + E   +KGI+ N +TY  L+ G 
Sbjct: 363 ---RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 26/214 (12%)

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA--- 379
           P  ++ N ++ G     +V+ A +     + +   PDI T N ++SGLCR G L KA   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG---LLSEMEEKKLGPDRYTYAAI 436
            K  ++W   G A    TYN+LI   CK+    + +    LL EM E  + P   T+  +
Sbjct: 214 AKDIKAW---GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                ++     A +    M + G                 I  S ++Y+  I+  CS+G
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQG-----------------IAASVVTYNSLISGLCSEG 313

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           + ++ +++ EE    G++ N+ T+  ++ G  K+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +P   + N LL+GL     ++ A K FRS + +  + D  T+NT+IS LC+  +L  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVE---SGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           +  +++   L P   TY ++     +   +G +         MVE G             
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG------------- 259

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               I P+++++   IN +C       A+++FEE +Q+GIA +  TY +L++GL    K
Sbjct: 260 ----ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 213/405 (52%), Gaps = 3/405 (0%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+ ++ N L++G      +  A +      + +  PD++T+N +I+G C  G L +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK---LIDELDEHGIKPNAVTHNIMIKW 159
            K++++  L P V TYN+LI+ + + G +   +    L+ E+ E GI P AVT  ++I  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           YCK      A ++   M++ G +   VTYN+LI   C  G +EE  ++M+ M   GL  N
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            IT   +L   C +  + +A   ++  ++R    D V Y  LI  Y R  K   A+ + +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M ++ I P+  TYN +I G S+SG    A  +L+E+ + G+  D  T+N +I   C +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           +V KA++  ++M E   +P+ +T N ++ G C +G ++ A +         K  + VTYN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             I   C+  ++++A  LL+EM +K L P+  TY  I   ++E G
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 197/398 (49%), Gaps = 40/398 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+NT++  L + G+L +  D+  D+K  GL P+  TYN L+ GYCK G     M  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGN-MYH 247

Query: 68  VDL----MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           VD+    M +    P   T+ +LING+C       A R+ +EM+   +   VVTYN+LI+
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G+  E  KL++E+++ G+ PN +T   ++K +CK+G +  A   +  M E    P
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D V YN LID   + G ME+A  + + M +KG+  N  T                     
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT--------------------- 406

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                         Y  LITG+ R      A  L DEMKE+ I     TYN +I  L   
Sbjct: 407 --------------YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+  +A+ +L+E+ + G+ P+  T+NTII GFC +G ++ A +   +M +   + ++VT 
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           N+ +   C+ G +++A       + K    + +TY T+
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 195/368 (52%), Gaps = 19/368 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKG---KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           ++ +G  P   TYN+++D   KKG    +  V  LL +M + G+ P   T+ +L++GYCK
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
                 A+RV + M Q      V TYN LI+G C+ G +EE  +L +EME L L P+ +T
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +  ++  F + G   +A   ID + E  ++P+ V +NI+I  Y + GK++ A  +   M 
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G SP+  TYN LI    ++G+   A  ++D M  KG++ + +T N ++  LCC+ ++ 
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVR 456

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL+  S+ G   + ++Y T+I G+        A ++   M++ +   +  TYN  I
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFI 516

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               Q GK ++A D+LNE+L   ++P+  T+ TI  G                M+EK + 
Sbjct: 517 KYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------MMEKGYT 560

Query: 358 PDIVTCNI 365
           PDI  C +
Sbjct: 561 PDIRGCTV 568



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 196/395 (49%), Gaps = 13/395 (3%)

Query: 72  TQNKSLPDVWTYNMLINGWCNA---GMLEEAFR--LRKEMESLKLLPDVVTYNTLINRFF 126
           +  +  P   + N L+ G   A    + E+AFR  LR+ +      PD+ T+NT+I+   
Sbjct: 148 SHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS-----PDIYTFNTVISGLC 202

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI---VRNMEENGFSP 183
             G+  +A  +  ++   G+ P+  T+N +I  YCK+G       +   ++ M E G SP
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             VT+  LI+  CK  N   A R+ + M ++G+  + +T N+++  LC E K++E   L+
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                 G   +E+++G ++ G+ +      A    D M ER + P    YN +I    + 
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK E A+ +   + + G+ P+ TT+N +I GF   G    A    ++M EK  + D+VT 
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+L+  LC +G + KA+K        G   + +TYNT+I   C +  ++ A+ + + ME+
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +   +  TY        + G+++EA    + M++
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 24/406 (5%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           + R  +  R+ +AF L  E      +P+  + N ++       ++D A K  R+      
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRH-RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRV 187

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY- 240
           SPD  T+NT+I   C+ G + +A  +   +   GL  +  T N+++   C +      Y 
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 241 --MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
             MLL    + G     V++G LI GY ++     A+++++EMK++ I  S  TYN++I 
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL   GK E+ + ++ E+   G+ P+E TF  ++ GFC +G +  A  + + M E++ +P
Sbjct: 308 GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP 367

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D+V  NIL+    R G +E A+    +   KG + +  TYN LI+   +      A GLL
Sbjct: 368 DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLL 427

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM+EK +  D  TY  +  AL   G + +A K    M E G                 +
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG-----------------L 470

Query: 479 DPSSISYSEKINEHCSQGRYKDALQI---FEETRQKGIAINKSTYM 521
           +P+ ++Y+  I   C +G  K A +I    E+ R++   +  + ++
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFI 516



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 21/293 (7%)

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A++L   +  R +     S   L+ G    ++ + A K +     R++ P  +T+N +I
Sbjct: 140 DAFLLAGESHPR-HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVI 198

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH---NKMVEK 354
            GL + G+  +A D+  ++   G+ P   T+N++I G+C +G             +MVE 
Sbjct: 199 SGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA 258

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P  VT  +L++G C+      A++ F     +G A   VTYN+LIS LC E ++E+ 
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L+ EME+  L P+  T+  +     + G + +A  +   M E                
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE---------------- 362

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              ++P  + Y+  I+ +   G+ +DA+ + E   +KGI+ N +TY  L+ G 
Sbjct: 363 -RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 26/214 (12%)

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA--- 379
           P  ++ N ++ G     +V+ A +     + +   PDI T N ++SGLCR G L KA   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG---LLSEMEEKKLGPDRYTYAAI 436
            K  ++W   G A    TYN+LI   CK+    + +    LL EM E  + P   T+  +
Sbjct: 214 AKDIKAW---GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
                ++     A +    M + G                 I  S ++Y+  I+  CS+G
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQG-----------------IAASVVTYNSLISGLCSEG 313

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           + ++ +++ EE    G++ N+ T+  ++ G  K+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKK 347



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 20/179 (11%)

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
           +P   + N LL+GL     ++ A K FRS + +  + D  T+NT+IS LC+  +L  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVE---SGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           +  +++   L P   TY ++     +   +G +         MVE G             
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG------------- 259

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
               I P+++++   IN +C       A+++FEE +Q+GIA +  TY +L++GL    K
Sbjct: 260 ----ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 263/562 (46%), Gaps = 57/562 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D V Y  ++D LFK G L E       + +   VPN  TY  LV G CK G L  A
Sbjct: 326 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 385

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++  M +   +P+V TY+ +ING+   GMLEEA  L ++ME   ++P+  TY T+I+ 
Sbjct: 386 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 445

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F++G+   A +L  E+   G++ N    + ++    + G+I +   +V++M   G + D
Sbjct: 446 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 505

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL--DEAYML 242
            + Y +LID   K G+ E A    + M  +G+  + ++ N ++  +    K+  D AY  
Sbjct: 506 QINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-- 563

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
                ++G   D  ++  ++    +   +   LKLWD+MK   I PS  + N ++  L +
Sbjct: 564 -KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 622

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTF---------------------------------- 328
           +GK E+AI +LN+++   + P+ TT+                                  
Sbjct: 623 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 682

Query: 329 -NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
            NT+I   C  G  +KA      M  + F PD VT N L+ G      + KAL  +   +
Sbjct: 683 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 742

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
             G + +  TYNT+I  L     +++    LSEM+ + + PD +TY A+ +   + G ++
Sbjct: 743 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 802

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
            +      M+  G +                 P + +Y+  I+E  + G+   A ++ +E
Sbjct: 803 GSMTIYCEMIADGLV-----------------PKTSTYNVLISEFANVGKMLQARELLKE 845

Query: 508 TRQKGIAINKSTYMNLMNGLIK 529
             ++G++ N STY  +++GL K
Sbjct: 846 MGKRGVSPNTSTYCTMISGLCK 867



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 266/574 (46%), Gaps = 58/574 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M GF   PD VT+++I++ L K GK+ E   LL +M++  + PN  TY  LV    K   
Sbjct: 254 MSGFD--PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 311

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A+ +   M       D+  Y +L++G   AG L EA +  K +     +P+VVTY  
Sbjct: 312 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 371

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++G    A  +I ++ E  + PN VT++ MI  Y K+G +++A  ++R ME+  
Sbjct: 372 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 431

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TY T+ID   KAG  E A  +   M   G++ N   L+ +++ L    ++ E  
Sbjct: 432 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 491

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+     +G  LD+++Y +LI  +F+      AL   +EM+ER +     +YN +I G+
Sbjct: 492 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGM 551

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK   A      + + G+ PD  TFN +++    +G  E  L+  +KM     KP +
Sbjct: 552 LKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 610

Query: 361 VTCNILLSGLCREGILEKALKFFRSWIL------------------KGKAVDSV------ 396
           ++CNI++  LC  G +E+A+      +L                  K K  D++      
Sbjct: 611 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 670

Query: 397 -----------TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
                       YNTLI++LCK    + A  ++ +ME +   PD  T+ ++         
Sbjct: 671 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 730

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNT-------SKTPEEID------------PSSISYS 486
           + +A    S+M+E G I+  V   NT       +   +E+D            P   +Y+
Sbjct: 731 VRKALSTYSVMMEAG-ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 789

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             I+     G  K ++ I+ E    G+    STY
Sbjct: 790 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTY 823



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 273/537 (50%), Gaps = 33/537 (6%)

Query: 4   FGCLPDNVTYNTILDALFKKGKL-NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           FG +PD+  +N+++      G + ++V  + S M   G+ P+    N+L+  +CK+G L 
Sbjct: 89  FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 148

Query: 63  EAMRVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            A+ ++    +N+ +  D  TYN +I+G C  G+ +EA++   EM  + +LPD V+YNTL
Sbjct: 149 FAISLL----RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 204

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+ F + G  + A  L+DE+ E     N +TH I++  Y     I++A    R+M  +GF
Sbjct: 205 IDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIEEA---YRDMVMSGF 257

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD VT++++I+  CK G + E   ++  M    +  N +T  T++ +L        A  
Sbjct: 258 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 317

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           L +    RG  +D V Y  L+ G F+      A K +  + E   +P+  TY A++ GL 
Sbjct: 318 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 377

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++G    A  ++ ++L+  +IP+  T++++I+G+  +G +E+A+    KM +++  P+  
Sbjct: 378 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 437

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T   ++ GL + G  E A++  +   L G   ++   + L++ L +  R+++  GL+ +M
Sbjct: 438 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 497

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             K +  D+  Y ++     + G  E A  +   M E G              P ++   
Sbjct: 498 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG-------------MPWDV--- 541

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            +SY+  I+     G+   A   ++  R+KGI  + +T+  +MN   +R++  S+ +
Sbjct: 542 -VSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNS--QRKQGDSEGI 594



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 236/501 (47%), Gaps = 51/501 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGK----------------------------------- 25
           ME    +P+  TY T++D LFK GK                                   
Sbjct: 427 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 486

Query: 26  LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP-DVWTYN 84
           + EV+ L+ DM  +G+  ++  Y  L+  + K G  + A+   + M Q + +P DV +YN
Sbjct: 487 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM-QERGMPWDVVSYN 545

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           +LI+G    G +   +   K M    + PD+ T+N ++N   + G S    KL D++   
Sbjct: 546 VLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 604

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           GIKP+ ++ NI++   C+ GK+++A  I+  M      P+  TY   +D + K    +  
Sbjct: 605 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 664

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           F+  + +   G+K++    NT++ TLC      +A M++     RG+  D V++ +L+ G
Sbjct: 665 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 724

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           YF      +AL  +  M E  I P+  TYN +I GLS +G  ++    L+E+   GM PD
Sbjct: 725 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 784

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           + T+N +I G    G ++ ++  + +M+     P   T N+L+S     G + +A +  +
Sbjct: 785 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 844

Query: 385 SWILKGKAVDSVTYNTLISSLC------------KERRLEDAFGLLSEM-EEKKLGPDRY 431
               +G + ++ TY T+IS LC            K   L +A GLL EM EEK   P   
Sbjct: 845 EMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQ 904

Query: 432 TYAAIHTALVESGRLEEAQKF 452
           T   I  A  + G   +A++F
Sbjct: 905 TIYWISAAFSKPGMKVDAERF 925



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 263/552 (47%), Gaps = 42/552 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G LPD V+YNT++D   K G     + L+ ++ +  L+    T+ IL+S Y  L  
Sbjct: 189 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHA 244

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA R    M  +   PDV T++ +IN  C  G + E   L +EME + + P+ VTY T
Sbjct: 245 IEEAYRD---MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 301

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  F++     A  L  ++   GI  + V + +++    K G + +A K  + + E+ 
Sbjct: 302 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 361

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VTY  L+D  CKAG++  A  ++  M  K +  N +T +++++    +  L+EA 
Sbjct: 362 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 421

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +    +  +YGT+I G F+  K   A++L  EM+   +  + +  +A++  L
Sbjct: 422 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 481

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ ++   ++ +++  G+  D+  + ++I  F   G  E AL +  +M E+    D+
Sbjct: 482 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 541

Query: 361 VTCNILLSGLCREGIL--EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           V+ N+L+SG+ + G +  + A K  R    KG   D  T+N +++S  K+   E    L 
Sbjct: 542 VSYNVLISGMLKFGKVGADWAYKGMRE---KGIEPDIATFNIMMNSQRKQGDSEGILKLW 598

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            +M+   + P   +   +   L E+G++EEA    + M+         + PN +     +
Sbjct: 599 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM------LMEIHPNLTTYRIFL 652

Query: 479 DPSS---------------ISYSEKINEH---------CSQGRYKDALQIFEETRQKGIA 514
           D SS               +SY  K++           C  G  K A  +  +   +G  
Sbjct: 653 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 712

Query: 515 INKSTYMNLMNG 526
            +  T+ +LM+G
Sbjct: 713 PDTVTFNSLMHG 724



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 222/480 (46%), Gaps = 39/480 (8%)

Query: 71  MTQNKSLPD---------VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           +TQ +  PD         V  ++ L   + +   L  A R    M +  ++PD   +N+L
Sbjct: 42  ITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSL 101

Query: 122 INRFFESGRSMEAFKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           I++F  +G   +   LI  ++   G+ P+    N++I  +CK G++  A  ++RN     
Sbjct: 102 IHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RV 158

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D VTYNT+I   C+ G  +EA++ +  M + G+  +T++ NT++   C       A 
Sbjct: 159 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 218

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L++  S+    L+ +++  L++ Y+       A   + +M      P   T++++I  L
Sbjct: 219 ALVDEISE----LNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRL 271

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + GK  +   +L E+ +  + P+  T+ T++           AL  +++MV +    D+
Sbjct: 272 CKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDL 331

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V   +L+ GL + G L +A K F+  +   +  + VTY  L+  LCK   L  A  ++++
Sbjct: 332 VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQ 391

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M EK + P+  TY+++    V+ G LEEA           K+  Q V PN          
Sbjct: 392 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR------KMEDQNVVPN---------- 435

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL--IKRRKSISKAV 538
              +Y   I+     G+ + A+++ +E R  G+  N      L+N L  I R K +   V
Sbjct: 436 -GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLV 494


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 204/433 (47%), Gaps = 51/433 (11%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y+T++   FK+G + +   L   M   G+ PN  T N ++ G CK+  +
Sbjct: 113 DGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAM 172

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +A  V+  M     +P+  TYN LI+G+ ++G   EA R+ KEM      P+VVTYN L
Sbjct: 173 DKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNML 232

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTH---------------------------- 153
           I+   +SG   EA ++ + + + G KP+A T+                            
Sbjct: 233 IDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGM 292

Query: 154 -------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
                  +I I  YCK G++D+A      M++ GF PD VTY T+ID  CK G +++A  
Sbjct: 293 RSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMS 352

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
               M   GL  N IT  T++H      K ++A  L      RG   D   +  +I   F
Sbjct: 353 RFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLF 412

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ K   A KL+D M      P+  +YN MI G   +G+  + + +L+++L  G+ P   
Sbjct: 413 KEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAV 472

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           TFNT++ G                MV    KPD+ TC  L+   C +G +E  L  FR  
Sbjct: 473 TFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516

Query: 387 ILKGKAVDSVTYN 399
           + K    D++T N
Sbjct: 517 LGKADKTDTITEN 529



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 228/453 (50%), Gaps = 21/453 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKL 58
           M   GC PD  +Y+T+L  L  + K  E  +L+  M + G    P+  +Y+ ++ G+ K 
Sbjct: 75  MPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKE 134

Query: 59  GWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           G + +A  +   M  +   P+V T N +I+G C    +++A  + ++M    ++P+  TY
Sbjct: 135 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 194

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N+LI+ +  SG+  EA +++ E+   G +PN VT+N++I   CK G   +A +I  +M +
Sbjct: 195 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQ 254

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G  PD  TY +L+      GN+ E   + D+M + G++ N  T +  ++  C   +LDE
Sbjct: 255 SGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDE 314

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A +      + G+  D V+Y T+I G  +  + + A+  + +M +  + P+  T+  +I 
Sbjct: 315 ASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIH 374

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G S  GK E+A ++  E++  G+ PD T F  +I     EG+V +A +  + M     KP
Sbjct: 375 GFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKP 434

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN------------------- 399
           ++V+ N ++ G    G + + +K     +L G    +VT+N                   
Sbjct: 435 NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCK 494

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           TLI S C++ R+ED   L  EM  K    D  T
Sbjct: 495 TLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 234/511 (45%), Gaps = 7/511 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  T+  ++      G LN     L  + K GL  +   +  L+   C      +AM +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 68  V-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINR 124
           V   M +    PDV++Y+ L+ G C     EEA  L   M  +     PDVV+Y+T+I+ 
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           FF+ G   +A+ L  ++ +HGI PN VT N +I   CK   +DKA  +++ M +    P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
           C TYN+LI     +G   EA R++  M R G + N +T N ++  LC      EA  + N
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S  + G   D  +YG+L+ GY  +        + D M +  +  +  T++  I+   + G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + ++A     ++ Q G +PD  T+ T+I G C  G+++ A+    +M++    P+I+T  
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L+ G    G  EKA + F   + +G   D   +  +I  L KE ++ +A  L   M   
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT---SKTPEEIDPS 481
              P+  +Y  +      +G + E  K    M+  G +    V  NT         + P 
Sbjct: 431 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG-LKPTAVTFNTLLDGMVSMGLKPD 489

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKG 512
             +    I+  C  GR +D L +F E   K 
Sbjct: 490 VDTCKTLIDSCCEDGRIEDILTLFREMLGKA 520



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 228/493 (46%), Gaps = 57/493 (11%)

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           K  PD+ T+ +LI+  C+AG L   F    ++    L  D V +  L+       R+ +A
Sbjct: 8   KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67

Query: 135 FKLI-DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG--FSPDCVTYNTL 191
             ++   + E G  P+  +++ ++K  C E K ++A +++  M E+G    PD V+Y+T+
Sbjct: 68  MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           I    K G++ +A+ +   M   G+  N +T N+++  LC  + +D+A  +L        
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y +LI GY    +   A+++  EM      P+  TYN +I  L +SG   +A +
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEARE 247

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQV------------------------------ 341
           + N ++QSG  PD TT+ +++HG+ +EG +                              
Sbjct: 248 IFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYC 307

Query: 342 ------EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
                 E +L F  KM +  F PDIVT   ++ GLC+ G L+ A+  F   I  G + + 
Sbjct: 308 KCGRLDEASLTFI-KMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           +T+ TLI       + E A  L  EM ++ + PD   + A+   L + G++ EAQK   +
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M   G                   P+ +SY+  I+ +   G   + +++ ++    G+  
Sbjct: 427 MPRAGA-----------------KPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 469

Query: 516 NKSTYMNLMNGLI 528
              T+  L++G++
Sbjct: 470 TAVTFNTLLDGMV 482



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 16/177 (9%)

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           K   PDI T  IL+S  C  G L          I  G   D+V +  L+ +LC ++R  D
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 414 AFGL-LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           A  + L  M E    PD ++Y+ +   L    + EEA +   +M E G            
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDG------------ 114

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +   P  +SYS  I+    +G    A  +F +    GI  N  T  ++++GL K
Sbjct: 115 ---DNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCK 168


>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 216/421 (51%), Gaps = 6/421 (1%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N IL  L  KGKL     L+  M ++  +P   +   L+ G  KL   + A RV+
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            +M  +  +PD+ TYNML+ G C  G+L+ A  L  EM      PD +TYNT++   F+ 
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G   +A     +    G     +T+ ++I+  CK     +A +++ +M   G  PD VTY
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 308

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE---KKLDEAYMLLNS 245
           N+L++  CK G  E+   ++  +   G+  NT+T NT+LH+LC      ++DE  +++N+
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 368

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            S+       V+Y  LI G  +    +RA+  +D+M     +P   TYN ++  L + G 
Sbjct: 369 TSQPPTV---VTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGM 425

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            ++A+ +L+ L  +   P   T+N +I G   +G +EKA++ + +M+E+ F PD +T   
Sbjct: 426 VDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRT 485

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L  GL R  ++E AL   +    + + + +  +  +I  LC    +E+A  L  ++ E K
Sbjct: 486 LFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTELK 545

Query: 426 L 426
           +
Sbjct: 546 V 546



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 172/354 (48%), Gaps = 1/354 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD +TYN ++  L KKG L    +LL +M   G  P+  TYN ++      G   +A
Sbjct: 195 GGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQA 254

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +       +      + TY +LI   C      +A  + ++M      PD+VTYN+L+N 
Sbjct: 255 IGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNY 314

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +   +I  L  HG+ PN VT+N ++   C  G  D+  +I+  M      P 
Sbjct: 315 TCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPT 374

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN LI+  CK G ++ A    D M       + IT NT+L  LC E  +DEA  LL+
Sbjct: 375 VVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLH 434

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           S +        ++Y  +I G  +     +A++L+ EM ER   P   T+  + WGL +  
Sbjct: 435 SLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLD 494

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE-KSFK 357
             E A+ +L E+ +       + F  +IHG C+ G +E+A Q H K+ E K F+
Sbjct: 495 LVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTELKVFR 548



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 193/411 (46%), Gaps = 17/411 (4%)

Query: 117 TYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
           T N ++      G+ + A +LID +      P   +   +I+   K    ++A ++++ M
Sbjct: 132 TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 191

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
             +G  PD +TYN L+   CK G ++ A  ++D M   G   + IT NTIL  +      
Sbjct: 192 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 251

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           D+A        ++G     ++Y  LI    +     +A+++ ++M      P   TYN++
Sbjct: 252 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 311

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +    + GK E    ++  LL  GM P+  T+NT++H  C+ G  ++  +    M   S 
Sbjct: 312 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQ 371

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P +VT NIL++GLC+ G+L++A+ FF   +      D +TYNTL+++LCKE  +++A  
Sbjct: 372 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 431

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPE 476
           LL  + + +  P   TY  +   L + G +E+A +    M+E G                
Sbjct: 432 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERG---------------- 475

Query: 477 EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              P  I++             +DAL I +E  ++   I  S +  +++GL
Sbjct: 476 -FAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGL 525



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 157/322 (48%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD +TYNTIL  +F  G  ++      D  ++G      TY +L+   CK     +A
Sbjct: 230 GCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQA 289

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           M V++ M      PD+ TYN L+N  C  G  E+   +   + S  + P+ VTYNTL++ 
Sbjct: 290 MEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHS 349

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   E  +++  ++     P  VT+NI+I   CK G +D+A      M  +   PD
Sbjct: 350 LCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPD 409

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYNTL+ A CK G ++EA  ++  +         IT N ++  L  +  +++A  L  
Sbjct: 410 IITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYG 469

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              +RG+  D++++ TL  G FR +    AL +  EM +R        +  +I GL  +G
Sbjct: 470 EMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAG 529

Query: 305 KTEQAIDMLNELLQSGMIPDET 326
             E+A  +  +L +  +  +ET
Sbjct: 530 MIEEANQLHQKLTELKVFREET 551



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 18/327 (5%)

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N IL  LC + KL  A  L++  ++R       S   LI G  + E   RA ++   M
Sbjct: 132 TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 191

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
                +P   TYN ++ GL + G  + AI++L+E+  SG  PD  T+NTI+      G  
Sbjct: 192 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 251

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           ++A+ F    + K     ++T  +L+  +C+     +A++      ++G   D VTYN+L
Sbjct: 252 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 311

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           ++  CK+ + ED   ++  +    +GP+  TY  +  +L   G  +E  +   IM  T +
Sbjct: 312 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQ 371

Query: 462 ----INHQVVQPNTSK--------------TPEEIDPSSISYSEKINEHCSQGRYKDALQ 503
               + + ++     K                    P  I+Y+  +   C +G   +AL 
Sbjct: 372 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 431

Query: 504 IFEETRQKGIAINKSTYMNLMNGLIKR 530
           +         +    TY  +++GL K+
Sbjct: 432 LLHSLNDTRCSPGLITYNIVIDGLAKK 458



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    CLPD +TYNT+L AL K+G ++E   LL  +      P   TYNI++ G  K G 
Sbjct: 401 MVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGC 460

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++AM +   M +    PD  T+  L  G     ++E+A  + KEM           +  
Sbjct: 461 MEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRF 520

Query: 121 LINRFFESGRSMEAFKLIDELDE 143
           +I+    +G   EA +L  +L E
Sbjct: 521 VIHGLCAAGMIEEANQLHQKLTE 543


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 223/446 (50%), Gaps = 16/446 (3%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  NT++    K+G + E   L+  M+ QGL PN  T+N  +S  CK G + +A R+   
Sbjct: 208 VVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKD 267

Query: 71  MTQN----KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           M ++       PD  T++++++G+C+AG ++EA  L   M     L  V +YN  ++   
Sbjct: 268 MQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +GR  EA +L+ E+    I PN+ T+NI++   CKEGK   A ++   +     SPD V
Sbjct: 328 RNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVV 387

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TY +L+ A C  GN+  A R++D M +KG   N+ T N +L +L    +  EA  LL   
Sbjct: 388 TYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERM 447

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
           S++GY LD      +I G  R+ K + A+ + D M E          N+ +  +S S  +
Sbjct: 448 SEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSIS 507

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           ++ +            PD  T++ +I   C EG+ ++A +   +M+ K   PD V  +  
Sbjct: 508 QRCL------------PDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTF 555

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           + G C+ G    A+K  R    KG    + TYN LI    ++ + ++   L+SEMEEK +
Sbjct: 556 IHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGV 615

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKF 452
            P+  TY ++  +  + G L     F
Sbjct: 616 SPNVLTYNSLIKSFCQQGMLTRPCLF 641



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 245/483 (50%), Gaps = 52/483 (10%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           PDV+T N+L+   C+AG +E A R+ + M     + +  ++  L   +  +GRS++A K+
Sbjct: 143 PDVFTRNLLLRALCDAGRMELAQRVFEAMP----VRNEFSFGILARGYCRAGRSVDALKV 198

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +D +       N V  N ++  +CKEG +++A ++V  M   G +P+ VT+N+ I A CK
Sbjct: 199 LDGMPSM----NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCK 254

Query: 198 AGNMEEAFRMMDVMG---RKGL-KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYL 253
           AG + +A+R+   M    + GL + + +T + +L   C    +DEA +L++     G+  
Sbjct: 255 AGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLR 314

Query: 254 DEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDML 313
              SY   ++G  R+ +   A +L  EM   +I P+++TYN ++ GL + GK   A  + 
Sbjct: 315 RVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVE 374

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           N +    M PD  T+ +++H +CS+G +  A +  ++M +K   P+  T N+LL  L R 
Sbjct: 375 NFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRA 434

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK------KLG 427
           G   +A +       KG ++D+   N +I  LC+  +L+ A G++  M E+      +LG
Sbjct: 435 GRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLG 494

Query: 428 -----------------PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
                            PDR TY+ + +AL + GR +EA+K         K+   +V+  
Sbjct: 495 NSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKK---------KLLEMIVK-- 543

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                 +I P S+ Y   I+ +C  G+   A+++  +  +KG   +  TY  L+ G  ++
Sbjct: 544 ------DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEK 597

Query: 531 RKS 533
            KS
Sbjct: 598 HKS 600



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 247/519 (47%), Gaps = 52/519 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T N +L AL   G++   + +   M     V N  ++ IL  GYC+ G   +A
Sbjct: 140 GAQPDVFTRNLLLRALCDAGRMELAQRVFEAMP----VRNEFSFGILARGYCRAGRSVDA 195

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V+D M       ++   N ++ G+C  G++EEA RL + M    L P+VVT+N+ I+ 
Sbjct: 196 LKVLDGMPSM----NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISA 251

Query: 125 FFESGRSMEAFKLIDELDE---HGI-KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
             ++GR ++A+++  ++ E   HG+ +P+ VT ++M+  +C  G +D+A  +V  M   G
Sbjct: 252 LCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGG 311

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F     +YN  +    + G + EA  ++  M  + +  N+ T N I+  LC E K  +A 
Sbjct: 312 FLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDAR 371

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N         D V+Y +L+  Y        A ++ DEM ++   P++FTYN ++  L
Sbjct: 372 RVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSL 431

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK------ 354
            ++G+T +A  +L  + + G   D    N II G C   +++ A+   + M E+      
Sbjct: 432 WRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALG 491

Query: 355 ----SFK-------------PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
               SF              PD +T +IL+S LC+EG  ++A K     I+K  + DSV 
Sbjct: 492 RLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVI 551

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
           Y+T I   CK  +   A  +L +ME+K   P   TY  +     E  + +E  K  S M 
Sbjct: 552 YDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEME 611

Query: 458 ETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
           E G                 + P+ ++Y+  I   C QG
Sbjct: 612 EKG-----------------VSPNVLTYNSLIKSFCQQG 633



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 210/405 (51%), Gaps = 27/405 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMK---KQGLV-PNRTTYNILVSGYCKLGW 60
           G  P+ VT+N+ + AL K G++ +   +  DM+   + GL  P++ T+++++SG+C  G+
Sbjct: 237 GLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGF 296

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +VD+M     L  V +YN  ++G    G + EA  L +EM   ++ P+  TYN 
Sbjct: 297 VDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNI 356

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + G++ +A ++ + +    + P+ VT+  ++  YC +G I  A +I+  M + G
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  TYN L+ +  +AG   EA R+++ M  KG  ++T   N I+  LC   KLD A 
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAM 476

Query: 241 MLLNSASKRGYYL-----------------------DEVSYGTLITGYFRDEKANRALKL 277
            +++   + G                          D ++Y  LI+   ++ + + A K 
Sbjct: 477 GIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKK 536

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
             EM  + I P +  Y+  I G  + GKT  AI +L ++ + G  P   T+N +I GF  
Sbjct: 537 LLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEE 596

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           + + ++ ++  ++M EK   P+++T N L+   C++G+L +   F
Sbjct: 597 KHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTRPCLF 641



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 172/401 (42%), Gaps = 65/401 (16%)

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
           ++ AF+ +  L      P  V +N +I    +E ++D    + +++   G  PD  T N 
Sbjct: 92  AIPAFRSLRALASAPPPPTPV-YNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNL 150

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+ A C AG ME A R+ + M  +                                    
Sbjct: 151 LLRALCDAGRMELAQRVFEAMPVR------------------------------------ 174

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +E S+G L  GY R  ++  ALK+ D M    ++      N ++ G  + G  E+A 
Sbjct: 175 ---NEFSFGILARGYCRAGRSVDALKVLDGMPSMNLV----VCNTVVAGFCKEGLVEEAE 227

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK----SFKPDIVTCNIL 366
            ++  +   G+ P+  TFN+ I   C  G+V  A +    M E       +PD VT +++
Sbjct: 228 RLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVM 287

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           LSG C  G +++A          G      +YN  +S L +  R+ +A  LL EM  +++
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERI 347

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            P+ YTY  I + L + G+  +A++  +       I   V+ P+            ++Y+
Sbjct: 348 HPNSYTYNIIVSGLCKEGKAFDARRVENF------IRSGVMSPDV-----------VTYT 390

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++ +CS+G    A +I +E  QKG A N  TY  L+  L
Sbjct: 391 SLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSL 431



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 40/240 (16%)

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           L S   P    +N +I     E +++     +  ++    +PD+ T N+LL  LC  G +
Sbjct: 102 LASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRM 161

Query: 377 EKALKFF---------------RSWILKGKAVDS------------VTYNTLISSLCKER 409
           E A + F               R +   G++VD+            V  NT+++  CKE 
Sbjct: 162 ELAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTVVAGFCKEG 221

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            +E+A  L+  M  + L P+  T+ +  +AL ++GR+ +A +    M E  +  H + +P
Sbjct: 222 LVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQ--HGLPRP 279

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +            +++   ++  C  G   +A  + +  R  G      +Y   ++GL++
Sbjct: 280 D-----------QVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVR 328



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P   TYN ++    +K K +E+  L+S+M+++G+ PN  TYN L+  +C+ G 
Sbjct: 575 MEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGM 634

Query: 61  L 61
           L
Sbjct: 635 L 635


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 200/388 (51%), Gaps = 3/388 (0%)

Query: 16  ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNK 75
           +LD +        +    S++ + G  P    YNIL++ +CK G +++A  + + + +  
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 76  SLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF 135
             P   ++N LING C +  L+E FRL+K ME  ++ PDV TY+ LI+   + GR   A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           +L DE+ + G++PN +T   +I    +  ++D A      M   G  PD V YNTL++  
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDE 255
           CK G++ +A +++D M   G+K + IT  T++   C E  L+ A  +    ++ G  LD 
Sbjct: 374 CKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           V++  LI+G+ RD +   A +   EM E  + P   TY  +I G  + G  +    +L E
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +  +G  P   T+N +++G C +GQ++ A      M+     PD +T NILL G C+ G 
Sbjct: 494 MQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLIS 403
            E  LK       KG  VD   Y +L+S
Sbjct: 554 AEDLLKLRNE---KGLIVDYAYYTSLVS 578



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 186/347 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           +G  P    YN +++   K+G + + + + ++++K+GL P   ++N L++G CK   L E
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
             R+   M +N+  PDV+TY++LI+G C  G L+ A +L  EM+   L P+ +T+  LI+
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             + S R   A     ++   G+KP+ V +N ++   CK G ++KA K+V  M+  G  P
Sbjct: 337 GQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKP 396

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D +TY TLID  CK G++E A  +   M  +G+ ++ +    ++   C + ++ +A   L
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   D+ +Y  +I GY +        KL  EM+     P   TYN ++ GL + 
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           G+ + A  +L  +L  G+ PD+ T+N ++ G C  G+ E  L+  N+
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 20/445 (4%)

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           + ++ L+  + ++G + +A +  + + +            L+++   S   +  +    E
Sbjct: 154 FVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSE 213

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + E+G  P    +NI+I  +CKEG I  A  I   + + G  P  V++NTLI+  CK+ N
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           ++E FR+   M    +  +  T + ++H LC E +LD A  L +   +RG   + +++  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI G +R  + + A+  + +M    + P    YN ++ GL + G   +A  +++E+   G
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           M PD+ T+ T+I G+C EG +E A++    M E+    D V    L+SG CR+G +  A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +  R  +  G   D  TY  +I   CK+  ++  F LL EM+     P   TY  +   L
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            + G+++ A      M+  G                 + P  I+Y+  +  HC  G+ +D
Sbjct: 514 CKQGQMKNANMLLEAMLNLG-----------------VTPDDITYNILLEGHCKNGKAED 556

Query: 501 ALQIFEETRQKGIAINKSTYMNLMN 525
            L++  E   KG+ ++ + Y +L++
Sbjct: 557 LLKLRNE---KGLIVDYAYYTSLVS 578



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 191/359 (53%), Gaps = 3/359 (0%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P V  YN+LIN +C  G + +A  +  E+    L P  V++NTLIN   +S    E F+L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
              ++E+ I P+  T++++I   CKEG++D A ++   M++ G  P+ +T+  LID   +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           +  M+ A      M   G+K + +  NT+L+ LC    +++A  L++     G   D+++
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y TLI GY ++     A+++   M E  ++     + A+I G  + G+   A   L E++
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           ++GM PD+ T+  +I G+C +G V+   +   +M     KP ++T N+L++GLC++G ++
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            A     + +  G   D +TYN L+   CK  + ED   LL    EK L  D   Y ++
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTSL 576



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 120/212 (56%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD V YNT+L+ L K G +N+ R L+ +MK  G+ P++ TY  L+ GYCK G 
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGD 413

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+ AM +   M +   + D   +  LI+G+C  G + +A R  +EM    + PD  TY  
Sbjct: 414 LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTM 473

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+ + + G     FKL+ E+  +G KP  +T+N+++   CK+G++  A  ++  M   G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
            +PD +TYN L++ +CK G  E+  ++ +  G
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 226/428 (52%), Gaps = 2/428 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++       +L     LLS+M  +GL  N   Y  +++  C  G + +A+RV
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M  +  + D   +  +++G+C  G L  A     EM+   L  D VTY  LIN    
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   EA +++ E+++ G+  +AVT+ ++I  YCK GK+ +A  +   M +   +P+ VT
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L D  CK G++  A  ++  M  KGL++N  T N++++ LC    L++A   +    
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D  +Y T+I    + ++ +RA  L  EM ++ I P+  TYN ++ G   SG+ E
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+  + P+ TT+N+++  +C E  ++   + +  M+ +   P+  T NIL+
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   +++AL F    I KG  + + +YN LI  L K+++  +A  L  +M +++L 
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 428 --PDRYTY 433
             PD Y +
Sbjct: 703 AEPDVYNF 710



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 261/520 (50%), Gaps = 28/520 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +G  P   + N +L  L     L+E   L  ++ ++    N  +YNIL+   C  G 
Sbjct: 217 LRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALCTAGR 268

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A ++ D M    S PDV TY ++++G+C    LE A +L  EM +  L  + V Y +
Sbjct: 269 IKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + G+  +A ++++++  HG+  +A     ++  +C++G +  A      M++ G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D VTY  LI+  C+AG ++EA R++  M  KGL ++ +T   ++   C   K+ EA+
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++ N   ++    + V+Y  L  G  +      A +L  EM  + +  + FTYN++I GL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  EQA+  + ++ ++G+ PD  T+ TII   C   ++++A     +M++K  KP I
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L++G C  G +E   +     + K    ++ TYN+L+   C E+ ++    +   
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  +++ P+  TY  +     ++  ++EA  F S M+E G                    
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG-----------------FRL 668

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           ++ SY+  I     + ++ +A ++FE+ R++ +      Y
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 212/416 (50%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V Y +++  L  +G++++   ++ DM   G+V +   +  ++SG+C+ G L  A    D 
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +     D  TY  LING C AG L+EA R+ +EME   L  D VTY  LI+ + + G+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             EAF + +++ +  + PN VT+  +    CK+G +  A +++  M   G   +  TYN+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LI+  CKAGN+E+A R M  M   GLK +  T  TI+  LC  K+LD A+ LL     +G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
                V+Y  L+ G+    +     +L + M E+ I P+T TYN+++         +   
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++   +L   ++P+E T+N +I G C    +++AL FH++M+EK F+    + N L+  L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
            ++    +A + F     +    +   YN  I     E  LE    L  E+ E  L
Sbjct: 681 NKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTL 736



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 211/453 (46%), Gaps = 60/453 (13%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA +L  EL E     N  ++NI++K  C  G+I  A ++    +E    PD VTY  ++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQL---FDEMASPPDVVTYGIMV 292

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C    +E A +++  M  +GL++N +   +++  LC E ++ +A  ++      G  
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           LD   + T+++G+ R      A   +DEM++R +     TY A+I GL ++G+ ++A  +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L E+   G+  D  T+  +I G+C  G++ +A   HNKMV+K   P++VT   L  GLC+
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +G +  A +       KG  ++  TYN+LI+ LCK   LE A   + +M+E  L PD YT
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQV---------------------- 466
           Y  I  AL +S  L+ A      M++ G     + + V                      
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 467 ---VQPNTSK------------------------TPEEIDPSSISYSEKINEHCSQGRYK 499
              + PNT+                           +E+ P+  +Y+  I  HC     K
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +AL    E  +KG  +  S+Y  L+  L K++K
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 183/353 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VTY  +++ L + G+L E   +L +M+ +GL  +  TY +L+ GYCK+G 
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  V + M Q +  P+V TY  L +G C  G +  A  L  EM S  L  ++ TYN+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   ++G   +A + + ++DE G+KP+  T+  +I   C+  ++D+A  +++ M + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYN L++  C +G +E   R+++ M  K +  NT T N+++   C EK +    
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +      +    +E +Y  LI G+ +      AL    EM E+    +  +YNA+I  L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           ++  K  +A  +  ++ +  +  +   +N  I    +E  +E  L   +++VE
Sbjct: 681 NKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 192/366 (52%), Gaps = 2/366 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + D   + T++    +KG L   R+   +M+K+GL  +  TY  L++G C+ G LKEA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV+  M       D  TY +LI+G+C  G + EAF +  +M   ++ P+VVTY  L + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G    A +L+ E+   G++ N  T+N +I   CK G +++A + + +M+E G  PD
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY T+I A C++  ++ A  ++  M  KG+K   +T N +++  C   +++    LL 
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++  + +  +Y +L+  Y  ++      +++  M  ++++P+  TYN +I G  ++ 
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF--KPDIVT 362
             ++A+   +E+++ G     +++N +I     + +  +A +   KM ++    +PD+  
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709

Query: 363 CNILLS 368
             I LS
Sbjct: 710 FYIDLS 715



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 142/282 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+ VTY  + D L K+G +    +LL +M  +GL  N  TYN L++G CK G L++AMR 
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRT 517

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  M +    PDV+TY  +I   C +  L+ A  L +EM    + P +VTYN L+N F  
Sbjct: 518 MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 577

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SGR     +L++ + E  I PN  T+N ++K YC E  +    +I + M      P+  T
Sbjct: 578 SGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENT 637

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN LI  +CKA NM+EA      M  KG ++   + N ++  L  +KK  EA  L     
Sbjct: 638 YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           K     +   Y   I   F ++     L L DE+ E  ++ S
Sbjct: 698 KERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKS 739


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 226/428 (52%), Gaps = 2/428 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++       +L     LLS+M  +GL  N   Y  +++  C  G + +A+RV
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M  +  + D   +  +++G+C  G L  A     EM+   L  D VTY  LIN    
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   EA +++ E+++ G+  +AVT+ ++I  YCK GK+ +A  +   M +   +P+ VT
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L D  CK G++  A  ++  M  KGL++N  T N++++ LC    L++A   +    
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D  +Y T+I    + ++ +RA  L  EM ++ I P+  TYN ++ G   SG+ E
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+  + P+ TT+N+++  +C E  ++   + +  M+ +   P+  T NIL+
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   +++AL F    I KG  + + +YN LI  L K+++  +A  L  +M +++L 
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 428 --PDRYTY 433
             PD Y +
Sbjct: 703 AEPDVYNF 710



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 261/520 (50%), Gaps = 28/520 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +G  P   + N +L  L     L+E   L  ++ ++    N  +YNIL+   C  G 
Sbjct: 217 LRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALCTAGR 268

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A ++ D M    S PDV TY ++++G+C    LE A +L  EM +  L  + V Y +
Sbjct: 269 IKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + G+  +A ++++++  HG+  +A     ++  +C++G +  A      M++ G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D VTY  LI+  C+AG ++EA R++  M  KGL ++ +T   ++   C   K+ EA+
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++ N   ++    + V+Y  L  G  +      A +L  EM  + +  + FTYN++I GL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  EQA+  + ++ ++G+ PD  T+ TII   C   ++++A     +M++K  KP I
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L++G C  G +E   +     + K    ++ TYN+L+   C E+ ++    +   
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M  +++ P+  TY  +     ++  ++EA  F S M+E G                    
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG-----------------FRL 668

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
           ++ SY+  I     + ++ +A ++FE+ R++ +      Y
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 215/426 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   + V Y +++  L  +G++++   ++ DM   G+V +   +  ++SG+C+ G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A    D M +     D  TY  LING C AG L+EA R+ +EME   L  D VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G+  EAF + +++ +  + PN VT+  +    CK+G +  A +++  M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +  TYN+LI+  CKAGN+E+A R M  M   GLK +  T  TI+  LC  K+LD A+
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +G     V+Y  L+ G+    +     +L + M E+ I P+T TYN+++   
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                 +   ++   +L   ++P+E T+N +I G C    +++AL FH++M+EK F+   
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA 670

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N L+  L ++    +A + F     +    +   YN  I     E  LE    L  E
Sbjct: 671 SSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDE 730

Query: 421 MEEKKL 426
           + E  L
Sbjct: 731 LVEVTL 736



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 211/453 (46%), Gaps = 60/453 (13%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA +L  EL E     N  ++NI++K  C  G+I  A ++    +E    PD VTY  ++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQL---FDEMASPPDVVTYGIMV 292

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C    +E A +++  M  +GL++N +   +++  LC E ++ +A  ++      G  
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           LD   + T+++G+ R      A   +DEM++R +     TY A+I GL ++G+ ++A  +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L E+   G+  D  T+  +I G+C  G++ +A   HNKMV+K   P++VT   L  GLC+
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +G +  A +       KG  ++  TYN+LI+ LCK   LE A   + +M+E  L PD YT
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQV---------------------- 466
           Y  I  AL +S  L+ A      M++ G     + + V                      
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 467 ---VQPNTSK------------------------TPEEIDPSSISYSEKINEHCSQGRYK 499
              + PNT+                           +E+ P+  +Y+  I  HC     K
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +AL    E  +KG  +  S+Y  L+  L K++K
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 168/357 (47%), Gaps = 35/357 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VTY  +++ L + G+L E   +L +M+ +GL  +  TY +L+ GYCK+G 
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 61  LKEAMRVVDLMTQNKSLPDV-----------------------------------WTYNM 85
           + EA  V + M Q +  P+V                                   +TYN 
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LING C AG LE+A R   +M+   L PDV TY T+I    +S     A  L+ E+ + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           IKP  VT+N+++  +C  G+++   +++  M E    P+  TYN+L+   C   NM+   
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +   M  + +  N  T N ++   C  + + EA    +   ++G+ L   SY  LI   
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            + +K   A +L+++M++ ++      YN  I         E  + + +EL++  ++
Sbjct: 681 NKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 248/526 (47%), Gaps = 22/526 (4%)

Query: 16  ILDALFKKGKLN---EVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           +L A  + G L+   E+ D + ++     VP+    N L+S   K   L +A +V D M 
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                 D ++  +L+ G CN G +E   +L +       +P++V YNT+I  + + G   
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
            A+ +  EL   G  P   T   MI  +CKEG    + +++  ++E G        N +I
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           DA  + G   +    +  +     K +  T N +++ LC E K + A   L+ ASK+G  
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + +SY  LI  Y + ++ + A KL  +M ER   P   TY  +I GL  SG  + A++M
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
             +L+  G+ PD   +N ++ G C  G+   A    ++M++++  PD      L+ G  R
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G  ++A K F   + KG  VD V +N +I   C+   L++A   ++ M E+ L PD++T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y+ I    V+   +  A K    M           + N  K      P+ ++Y+  IN  
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYM-----------EKNKCK------PNVVTYTSLINGF 600

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           C QG +K A + F+E + + +  N  TY  L+  L K   ++ KAV
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 253/561 (45%), Gaps = 51/561 (9%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           DN +   ++  +  +GK+   R L+     +G +PN   YN ++ GYCKLG ++ A  V 
Sbjct: 204 DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF 263

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---------------------- 106
             +     +P + T+  +ING+C  G    + RL  E+                      
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRH 323

Query: 107 -------ESLKLL------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
                  ES+  +      PDV TYN LINR  + G+   A   +DE  + G+ PN +++
Sbjct: 324 GYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY 383

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
             +I+ YCK  + D A K++  M E G  PD VTY  LI     +G+M++A  M   +  
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +G+  +    N ++  LC   +   A +L +    R    D   Y TLI G+ R    + 
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A K++    E+ +      +NAMI G  +SG  ++A+  +N + +  ++PD+ T++TII 
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G+  +  +  A++    M +   KP++VT   L++G C +G  + A + F+   L+    
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623

Query: 394 DSVTYNTLISSLCKERR-LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE--SGRLEEAQ 450
           + VTY TLI SL KE   LE A      M   K  P+  T+  +    V+  SG+     
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGK----- 678

Query: 451 KFTSIMVETGKINHQ----VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
               ++ E    NH       +       +     + +Y+  +   C  G  K A    +
Sbjct: 679 ----VLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734

Query: 507 ETRQKGIAINKSTYMNLMNGL 527
           +  +KG + +  ++  +++G 
Sbjct: 735 KMVKKGFSPDPVSFAAILHGF 755



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 228/452 (50%), Gaps = 2/452 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E +  +PD +  N++L  L K  +L + R +  +M  +G   +  +  ILV G C  G 
Sbjct: 161 VELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++   ++++       +P++  YN +I G+C  G +E A+ + KE++    +P + T+ T
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNA-VTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +IN F + G  + + +L+ E+ E G++ +    +NI+   Y    K+D A + +  +  N
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA-ESIGWIIAN 339

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              PD  TYN LI+  CK G  E A   +D   +KGL  N ++   ++   C  K+ D A
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LL   ++RG   D V+YG LI G       + A+ +  ++ +R + P    YN ++ G
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++G+   A  + +E+L   ++PD   + T+I GF   G  ++A +  +  VEK  K D
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +V  N ++ G CR G+L++AL        +    D  TY+T+I    K++ +  A  +  
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
            ME+ K  P+  TY ++       G  + A++
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 181/386 (46%), Gaps = 17/386 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P+N++Y  ++ A  K  + +    LL  M ++G  P+  TY IL+ G    G + +A
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434

Query: 65  MRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           + + V L+ +  S PD   YNML++G C  G    A  L  EM    +LPD   Y TLI+
Sbjct: 435 VNMKVKLIDRGVS-PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLID 493

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F  SG   EA K+     E G+K + V HN MIK +C+ G +D+A   +  M E    P
Sbjct: 494 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVP 553

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  TY+T+ID   K  +M  A ++   M +   K N +T  ++++  CC+     A    
Sbjct: 554 DKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKA-NRALKLWDEMKERQIMPSTFTYNAMIWGL-- 300
                R    + V+Y TLI    ++     +A+  W+ M   + +P+  T+N ++ G   
Sbjct: 614 KEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673

Query: 301 ------------SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
                       S  G++    +  + +   G       +N+ +   C  G V+ A  F 
Sbjct: 674 KTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQ 733

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREG 374
           +KMV+K F PD V+   +L G C  G
Sbjct: 734 DKMVKKGFSPDPVSFAAILHGFCVVG 759



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/585 (23%), Positives = 241/585 (41%), Gaps = 110/585 (18%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK----- 57
           G GC+P+ V YNTI+    K G +     +  ++K +G +P   T+  +++G+CK     
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292

Query: 58  -----LGWLKE-AMRV------------------------VDLMTQNKSLPDVWTYNMLI 87
                L  +KE  +RV                        +  +  N   PDV TYN+LI
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352

Query: 88  NGWCN-------AGMLEE----------------------------AFRLRKEMESLKLL 112
           N  C         G L+E                            A +L  +M      
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD+VTY  LI+    SG   +A  +  +L + G+ P+A  +N+++   CK G+   A  +
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
              M +    PD   Y TLID   ++G+ +EA ++  +   KG+K++ +  N ++   C 
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
              LDEA   +N  ++     D+ +Y T+I GY + +    A+K++  M++ +  P+  T
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKM 351
           Y ++I G    G  + A +   E+    ++P+  T+ T+I     E   +EKA+ +   M
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652

Query: 352 VEKSFKPDIVTCNILLSGLCRE--------------GILEKALKFFRSWILKGKAVDSVT 397
           +     P+ VT N LL G  ++              G      +FF      G +  +  
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAA 712

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR------------ 445
           YN+ +  LC    ++ A     +M +K   PD  ++AAI       G             
Sbjct: 713 YNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNL 772

Query: 446 ----LEEAQKFTSIM---------VETGKINHQVVQPNTSKTPEE 477
               LE A +++ ++          E   I H +V+   +K P E
Sbjct: 773 GEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEKADTKEPVE 817


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 222/456 (48%), Gaps = 9/456 (1%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           L D    N +L  L K  +  ++  L+  MK   + P   T+ IL++  CK   + +A+ 
Sbjct: 149 LKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALE 208

Query: 67  VVDLMTQNKS------LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           V + M   K        PD   YN LI+G C  G  EEA  L  +M S +  P   T+N 
Sbjct: 209 VFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNC 268

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN +  SG    A KL +E++   I+PN +T N ++   CK  +I  A +  R M++ G
Sbjct: 269 LINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKG 328

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              + VTY   I+A C   NM +A   +D M + G   + +   T++  L    +LD+A 
Sbjct: 329 LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDAS 388

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +++   + G+ LD V Y  LI+ + +  K +RA +  +EM+   + P + TYN +I   
Sbjct: 389 SVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYF 448

Query: 301 SQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKM--VEKSFK 357
           S+ G  + A   + ++ +  G+ P   T+  +IH +C    +++A++   +M  V     
Sbjct: 449 SKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVP 508

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P+ V  NIL+  LC++  +  AL        +G   ++ TYN++  +L  +  L+ AF L
Sbjct: 509 PNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKL 568

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           +  M E+   PD  T   +   L   G + + +KFT
Sbjct: 569 MDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFT 604



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 228/464 (49%), Gaps = 15/464 (3%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
            PD +    ++  L + G  N   ++L ++     + +    N L++G   LG  +E  +
Sbjct: 114 FPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTG---LGKAREFGK 170

Query: 67  VVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEAF----RLRKEMESLKLL--PDVVT 117
           +  LM + K +   P V T+ +LIN  C    +++A     +++ E E  K+   PD + 
Sbjct: 171 MNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIM 230

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           YNTLI+   + GR  EA  L+ ++      P   T N +I  YC+ G+I+ A K+   ME
Sbjct: 231 YNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEME 290

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
                P+ +T NTL+D  CK   +  A     VM +KGLK N +T    ++  C    ++
Sbjct: 291 NAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMN 350

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A   L+  SK G + D V Y TLI G  +  + + A  +  ++KE         YN +I
Sbjct: 351 KAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLI 410

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSF 356
               +  K ++A + LNE+  +G+ PD  T+NT+I  F   G  + A +F  KM  E+  
Sbjct: 411 SEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGL 470

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSW--ILKGKAVDSVTYNTLISSLCKERRLEDA 414
            P + T   L+   C    +++A+K F+    +      ++V YN LI SLCK+ ++  A
Sbjct: 471 SPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFA 530

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             LL +M+ + + P+  TY +I  AL +   L++A K    MVE
Sbjct: 531 LSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVE 574



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 243/529 (45%), Gaps = 30/529 (5%)

Query: 14  NTILDALFKKGKLNEVRDLLSDM--KKQGLVPNRTTYNILVSGYCKLGWLK------EAM 65
           N I++ L K G+++   ++L +M   +    PN  T  I+ +   K+  L+      E  
Sbjct: 43  NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIA 102

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +V    ++   PD      LI+  C +G    A+ +   +  L  L D    N L+   
Sbjct: 103 GLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGL 162

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM----EENGF 181
            ++    +   L+ ++ +  I+P  +T  I+I   CK  +ID A ++   M    EE   
Sbjct: 163 GKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKV 222

Query: 182 --SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +PD + YNTLID  CK G  EEA  +M  M        T T N +++  C   +++ A
Sbjct: 223 FVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVA 282

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + L N         + ++  TL+ G  +  + + A++ +  M+++ +  +  TY   I  
Sbjct: 283 HKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINA 342

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
                   +A++ L+E+ + G  PD   + T+I G    G+++ A    +K+ E  F  D
Sbjct: 343 FCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLD 402

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            V  N+L+S  C++  L++A ++     L G   DSVTYNTLIS   K    + A   + 
Sbjct: 403 RVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462

Query: 420 EM-EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
           +M EE+ L P  +TY A+  A   +  ++EA K   I  E   +         SK P   
Sbjct: 463 KMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIK---IFKEMNNV--------ASKVP--- 508

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            P+++ Y+  I+  C Q +   AL + ++ + +G+  N +TY ++   L
Sbjct: 509 -PNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKAL 556



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 168/347 (48%), Gaps = 7/347 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P   T+N +++   + G++     L ++M+   + PN  T N LV G CK   +  A+
Sbjct: 259 CAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAV 318

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
               +M Q     +  TY + IN +CN   + +A     EM      PD V Y TLI   
Sbjct: 319 EFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGL 378

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++GR  +A  ++ +L E G   + V +N++I  +CK+ K+D+A + +  ME  G  PD 
Sbjct: 379 AQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDS 438

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMG-RKGLKMNTITLNTILHTLCCEKKLDEAYMLL- 243
           VTYNTLI    K GN + A + M  M   +GL     T   ++H  C    +DEA  +  
Sbjct: 439 VTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFK 498

Query: 244 ---NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
              N ASK     + V Y  LI    +  + N AL L D+MK R +MP+T TYN++   L
Sbjct: 499 EMNNVASK--VPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKAL 556

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
                 ++A  +++ +++    PD  T   +     + G++ K  +F
Sbjct: 557 RDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKF 603



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 223/467 (47%), Gaps = 37/467 (7%)

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE--LDEHGIKPN-- 149
           GM++EA      ++S     +V   N +IN   +SGR   A  ++DE  L E   +PN  
Sbjct: 20  GMVDEALAAFSTLDSHAKNTNV--RNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDK 77

Query: 150 --AVTHNIMIKWYCKEGKI--DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
              +  N ++K    EG++  D+   +V    ++   PD +    LI   C++GN   A+
Sbjct: 78  TAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAW 137

Query: 206 RMMD-VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            ++D +M   GLK +    N +L  L   ++  +  +L+            +++G LI  
Sbjct: 138 NILDNLMMLNGLK-DAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINH 196

Query: 265 YFRDEKANRALKLWDEMKERQ------IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             +  + + AL+++++MK  +      + P T  YN +I GL + G+ E+A+ ++ ++  
Sbjct: 197 LCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRS 256

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
               P   TFN +I+G+C  G++E A +  N+M     +P+++T N L+ G+C+   +  
Sbjct: 257 DQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRIST 316

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A++FFR    KG   ++VTY   I++ C    +  A   L EM +    PD   Y  +  
Sbjct: 317 AVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLIC 376

Query: 439 ALVESGRLEEAQKFTSIMVETG----KINHQVV-----QPNTSKTPEE---------IDP 480
            L ++GRL++A    S + E G    ++ + V+     + N     +E         + P
Sbjct: 377 GLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKP 436

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEE-TRQKGIAINKSTYMNLMNG 526
            S++Y+  I+     G +K A +  ++ T ++G++    TY  L++ 
Sbjct: 437 DSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHA 483



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 3/308 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME     P+ +T NT++D + K  +++   +    M+++GL  N  TY + ++ +C +  
Sbjct: 289 MENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNN 348

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +AM  +D M+++   PD   Y  LI G   AG L++A  +  +++      D V YN 
Sbjct: 349 MNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNV 408

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EEN 179
           LI+ F +  +   A + ++E++  G+KP++VT+N +I ++ K G    A K ++ M EE 
Sbjct: 409 LISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEE 468

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM--NTITLNTILHTLCCEKKLD 237
           G SP   TY  LI A C   N++EA ++   M     K+  NT+  N ++ +LC + +++
Sbjct: 469 GLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVN 528

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  LL+    RG   +  +Y ++          ++A KL D M E+   P   T   + 
Sbjct: 529 FALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILT 588

Query: 298 WGLSQSGK 305
             LS  G+
Sbjct: 589 EWLSAVGE 596


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 239/526 (45%), Gaps = 69/526 (13%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           +  ++D L +    +     L ++K  G+  +   + +L+S Y K+G  ++A+     M 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEE-----AFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +    PDV+TYN+++       M EE     AF +  EM      P++ T+  L++  ++
Sbjct: 155 EFDCRPDVFTYNVIL----RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            GR+ +A K+ D++   GI PN VT+ I+I   C+ G  D A K+   M+ +G  PD V 
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N L+D  CK G M EAF ++ +                                     
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLF-----------------------------------E 295

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G+ L    Y +LI G FR  +  +A +L+  M ++ I P    Y  +I GLS++GK E
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ +L+ +   G+ PD   +N +I   C  G +E+      +M E    PD  T  IL+
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             +CR G++ +A + F      G +    T+N LI  LCK   L++A  LL +ME  +  
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR-- 473

Query: 428 PDRYTYAAIHTA------LVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           P        H+       +VESG + +A +  +   +TG                   P 
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGS-----------------SPD 516

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            +SY+  IN  C  G    AL++    + KG++ +  TY  L+NGL
Sbjct: 517 IVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 253/531 (47%), Gaps = 24/531 (4%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+  T+  ++D L+KKG+ ++ + +  DM  +G+ PNR TY IL+SG C+ G   +A 
Sbjct: 194 CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDAR 253

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++   M  + + PD   +N L++G+C  G + EAF L +  E    +  +  Y++LI+  
Sbjct: 254 KLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
           F + R  +AF+L   + +  IKP+ + + I+I+   K GKI+ A K++ +M   G SPD 
Sbjct: 314 FRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDT 373

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             YN +I A C  G +EE   +   M       +  T   ++ ++C    + EA  +   
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ----IMPSTFTYNAMIWGLS 301
             K G      ++  LI G  +  +   A  L  +M+  +     +  + + N     + 
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           +SG   +A   L     +G  PD  ++N +I+GFC  G ++ AL+  N +  K   PD V
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L++GL R G  E+A K F  +           Y +L++  C++R++  AF L  + 
Sbjct: 554 TYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKY 611

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            +K    D  T   I     E               ET +   ++++ +T K    + P 
Sbjct: 612 LKKISCLDDETANEIEQCFKEG--------------ETERALRRLIELDTRKDELTLGP- 656

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
              Y+  +   C  GR+ +AL +F   R+K I +   + + L++GL KR +
Sbjct: 657 ---YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQ 704



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 189/374 (50%), Gaps = 7/374 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD   YN ++ AL  +G L E R L  +M +    P+  T+ IL+   C+ G 
Sbjct: 364 MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++EA  +   + ++   P V T+N LI+G C +G L+EA  L  +ME  +     +  + 
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483

Query: 121 LINRFF----ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM 176
             NR F    ESG  ++A++ +    + G  P+ V++N++I  +C+ G ID A K++  +
Sbjct: 484 SGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543

Query: 177 EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           +  G SPD VTYNTLI+   + G  EEAF++     +   + +     +++   C ++K+
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKV 601

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
             A+ L     K+   LD+ +    I   F++ +  RAL+   E+  R+   +   Y   
Sbjct: 602 LVAFNLWMKYLKKISCLDDET-ANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           + GL QSG+  +A+ + + L +  ++    +   +IHG C   Q++ A++     ++ +F
Sbjct: 661 LIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNF 720

Query: 357 KPDIVTCNILLSGL 370
           K     CN LLS L
Sbjct: 721 KLMPRVCNYLLSSL 734



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 202/435 (46%), Gaps = 48/435 (11%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           Y++++D LF+  +  +  +L ++M K+ + P+   Y IL+ G  K G +++A++++  M 
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                PD + YN +I   C  G+LEE   L+ EM   +  PD  T+  LI     +G   
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME--------------- 177
           EA ++  E+++ G  P+  T N +I   CK G++ +A  ++  ME               
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485

Query: 178 ------------------------ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
                                   + G SPD V+YN LI+  C+AG+++ A ++++V+  
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           KGL  +++T NT+++ L    + +EA+ L    +K  +      Y +L+T   R  K   
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLV 603

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT---FNT 330
           A  LW +  ++       T N  I    + G+TE+A   L  L++     DE T   +  
Sbjct: 604 AFNLWMKYLKKISCLDDETANE-IEQCFKEGETERA---LRRLIELDTRKDELTLGPYTI 659

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
            + G C  G+  +AL   + + EK       +C  L+ GLC+   L+ A++ F   +   
Sbjct: 660 WLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNN 719

Query: 391 KAVDSVTYNTLISSL 405
             +     N L+SSL
Sbjct: 720 FKLMPRVCNYLLSSL 734



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 138/340 (40%), Gaps = 66/340 (19%)

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW----------- 298
           G  +D   +  LI+ Y +   A +A++ +  MKE    P  FTYN ++            
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181

Query: 299 -------------------------GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
                                    GL + G+T  A  M +++   G+ P+  T+  +I 
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G C  G  + A +   +M      PD V  N LL G C+ G + +A +  R +   G  +
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
               Y++LI  L + RR   AF L + M +K + PD   Y  +   L ++G++E+A K  
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361

Query: 454 SIMVETGKINHQVVQPNT------------------------SKTPEEIDPSSISYSEKI 489
           S M   G      + P+T                          +  E  P + +++  I
Sbjct: 362 SSMPSKG------ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              C  G  ++A +IF E  + G + + +T+  L++GL K
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 25/277 (9%)

Query: 261 LITGYFRDEKANRALK----LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +IT   +DE  NR L     +W   +ER     +F    +I  LS+    +     L EL
Sbjct: 62  IITSVIKDE-VNRQLGFRFFIWASRRERLRSRESF--GLVIDMLSEDNGCDLYWQTLEEL 118

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G+  D   F  +I  +   G  EKA++   +M E   +PD+ T N++L  + RE + 
Sbjct: 119 KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVF 178

Query: 377 EK-ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
              A   +   +    + +  T+  L+  L K+ R  DA  +  +M  + + P+R TY  
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
           + + L + G  ++A+K    M  +G                   P S++++  ++  C  
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNY-----------------PDSVAHNALLDGFCKL 281

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           GR  +A ++     + G  +    Y +L++GL + R+
Sbjct: 282 GRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 204/421 (48%), Gaps = 2/421 (0%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
            ++YN +L+ L K G+ + V    +DM   G VPN  TY  L+   C+    +EA  V  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M      P+V++Y++LI G C    ++EA  L  EM      P+VVTY +L++   + G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +  EA  L   +   G  P+ V +N++I  + K+G + +A ++   M E G  P   TYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +L+    + G       +   M R+G   N  T N +L   C    + EA+ L       
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D VSY TLI G     K + A +L  EM    + P   +YN +I G S+SG  + A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           I +  E+ +SG+ PD  +++TII   C  G+V  A      M+     PD      L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVT-YNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           LCR   L ++ + F++ + K + V  +  YN L+  LCK +R +D   +  E+ E+   P
Sbjct: 377 LCRGERLTESCELFQAMV-KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435

Query: 429 D 429
           D
Sbjct: 436 D 436



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 205/409 (50%), Gaps = 3/409 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC+P+  TY  +L +L +  +  E R +   M  QG  PN  +Y+IL++G C+   + EA
Sbjct: 47  GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M      P+V TY  L++G C  G L+EA  L   M      PD V YN LI+ 
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G   EA++L +E+ E G  P   T+N ++  + ++G+  +   + ++M   G  P+
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T+N L+D  CK G+M EA R+   M   G   + ++ NT++  +C + K  EA  LL 
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D VSY  LI GY +    + A+KL+ E+ +  + P  F+Y+ +I  L ++G
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K   A  +  +++ +G  PD      ++ G C   ++ ++ +    MV+    P I   N
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
           +L+  LC+    +   + F     +G + D      ++ +L   RR +D
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL---RRSDD 452



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 204/468 (43%), Gaps = 52/468 (11%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           +YN L+    K G         + M     +P+ +TY  L+   C A   EEA  + + M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
            +    P+V +Y+ LI       +  EA +L++E+ + G +PN VT+  ++   CK GK+
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            +A  +   M   G  PD V YN LID   K G+M EA+R+ + M  KG      T    
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT---- 194

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
                                          Y +L++G+ R  +  R   L+ +M  +  
Sbjct: 195 -------------------------------YNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           +P+ FT+N ++ G  + G   +A  +  E+   G  PD  ++NT+I G CS+G+  +A +
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQR 283

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              +M+     PDIV+ NIL+ G  + G L+ A+K F      G   D+ +Y+T+I  LC
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +  ++  AF +  +M      PD      +   L    RL E+ +    MV+        
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKF------- 396

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                     E  P    Y+  + + C   R  D  +IF E  ++G +
Sbjct: 397 ----------ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 179/372 (48%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+  +Y+ ++  L +  K++E  +LL++M   G  PN  TY  L+SG CK+G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA+ +   M      PD   YN+LI+G+   G + EA+RL +EM     +P V TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F   G       L  ++   G  PN  T N ++  +CK G + +A ++   M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V+YNTLI   C  G   EA R++  M R G+  + ++ N ++        LD A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     K G   D  SY T+I    R  K   A  ++ +M      P       ++ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  +  ++ ++   +++   +P    +N +++  C   + +   +  +++ E+ F PD+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 361 VTCNILLSGLCR 372
               ++L  L R
Sbjct: 438 EISKVILETLRR 449



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 17/379 (4%)

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDV 210
           +++N +++   K G+ D       +M   G  P+  TY  L+ + C+A   EEA  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M  +G   N  + + ++  LC  +K+DEA  LLN     G+  + V+YG+L++G  +  K
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A+ L+  M  R   P    YN +I G S+ G   +A  +  E+L+ G IP   T+N+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++ GF  +G+  +       M+ +   P+I T N LL G C+ G + +A + F      G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D V+YNTLI  +C + +  +A  LL EM    +GPD  +Y  +     +SG L+ A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
           K    + ++G                 ++P + SYS  I+  C  G+   A  +F++   
Sbjct: 318 KLFYEIPKSG-----------------LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360

Query: 511 KGIAINKSTYMNLMNGLIK 529
            G A + +  + L+ GL +
Sbjct: 361 NGSAPDAAVVIPLVIGLCR 379



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 143/311 (45%), Gaps = 17/311 (5%)

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
            T++ N +L  L    + D  Y   N     G   +  +YG L+    + ++   A  ++
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
             M  +   P+ F+Y+ +I GL +  K ++A ++LNE++  G  P+  T+ +++ G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G++++A+   ++MV +   PD V  N+L+ G  ++G + +A + F   + KG      TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           N+L+S   ++        L  +M  +   P+ +T+  +     + G + EA +    M  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                   P  +SY+  I   CS+G+  +A ++  E  + G+  +  
Sbjct: 256 LG-----------------CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 519 TYMNLMNGLIK 529
           +Y  L++G  K
Sbjct: 299 SYNILIDGYSK 309



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 134/288 (46%), Gaps = 17/288 (5%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S+  Y    +SY  L+    +  + +     +++M     +P+T+TY  ++  L Q+ 
Sbjct: 7   AGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQ 66

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A  +   +   G  P+  +++ +I G C   +V++A +  N+M++   +P++VT  
Sbjct: 67  RFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LLSGLC+ G L++A+  F   + +G   D V YN LI    K+  + +A+ L  EM EK
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P  +TY ++ +     G     Q     M+  G +                 P+  +
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV-----------------PNIFT 229

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++  ++  C  G   +A ++F E R  G   +  +Y  L+ G+  + K
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK 277


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 258/534 (48%), Gaps = 51/534 (9%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           GK  +   ++ +M   G VP+ +TY+ ++   C    ++ A  +   M     +PDV+TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
            +LI+ +  AG++++A     EM      P VVTY TLI+ + ++ +   A +L + +  
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC----------------VT 187
            G  PN +T+  +I  YCK G I+KAC+I   M  +   PD                 VT
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L+D  CKA  +++A  +++ M   G + NTI  + ++   C   KLDEA  + +   
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + GY  +  +Y +LI   F+D++ +  LK+  +M E    P+   Y  MI GLS+  KT+
Sbjct: 708 EHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  ++  + + G  P+  T+  +I GF   G+V+K L+   +M  K   P+ VT  +L+
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK-----ERRLEDAFGLLSEME 422
           +  C  G L++A           + +    +   +SS CK     +R    + GLL E+E
Sbjct: 828 NHCCATGHLDEAYALL-------EEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVE 880

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
           +    P    Y  +    V++GRLE A           +++ +V+  + S   ++   +S
Sbjct: 881 KNGSAPIILLYKVLIDNFVKAGRLEVAL----------ELHKEVISASMSMAAKKNLYTS 930

Query: 483 I----SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +    SY+ KI           A ++F +  + G+  +  T+++L+ GLI+ R+
Sbjct: 931 LIYSFSYASKIGH---------AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRR 975



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 257/600 (42%), Gaps = 78/600 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P  +TYN ++    +  KL+  + +  +M + GL  +  T        CK+G 
Sbjct: 232 LKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGK 291

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +EA+ +++   +   +P+   YN +I+G C A   EEA      M S   +P+V TY  
Sbjct: 292 WREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI 348

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+       +     +++  +   G  P+    N ++  YCK      A K+++ ME+  
Sbjct: 349 LLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408

Query: 181 FSPDCVTYNTLIDANCKAGNM------EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
             P  V YN LI + C  G +      E A +  + M   G  +N + + +    LC   
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K ++AY +++     G+  D  +Y  +I       +   A  L+ EMK   ++P  +TY 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH--------------------- 333
            +I   S++G  +QA + L+E+++ G  P   T+ T+IH                     
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 334 --------------GFCSEGQVEKALQFHNKM--------VEKSF--------KPDIVTC 363
                         G+C  G +EKA Q + +M        V+  F        KP++VT 
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             L+ GLC+   ++ A     +  + G   +++ Y+ LI   CK  +L++A  +  +M E
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ-------PNTSKTPE 476
               P+ YTY+++   L +  RL+   K  S M+E     + V+           +KT E
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768

Query: 477 E-----------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                         P+ ++Y+  I+     G+    L++F E   KG A N  TY  L+N
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 224/476 (47%), Gaps = 20/476 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+G G +PD  TY  ++D   K G + +  + L +M + G  P   TY  L+  Y K   
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV----- 115
           +  A  + +LM      P+V TY  LI+G+C +G +E+A ++   M     +PDV     
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 116 -----------VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
                      VTY  L++   ++ +  +A  L++ +   G +PN + ++ +I  +CK  
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           K+D+A ++   M E+G++P+  TY++LID   K   ++   +++  M       N +   
Sbjct: 695 KLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++  L    K DEAY L+    ++G   + V+Y  +I G+ +  K ++ L+L+ EM  +
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+  TY  +I     +G  ++A  +L E+ Q+      +++  +I G+  E  +  +
Sbjct: 815 GCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--S 872

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK--AVDSVTYNTLI 402
           L    ++ +    P I+   +L+    + G LE AL+  +  I      A     Y +LI
Sbjct: 873 LGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLI 932

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
            S     ++  AF L  +M    + PD  T+  +   L+   R EEA + +  + +
Sbjct: 933 YSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQ 988



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 177/417 (42%), Gaps = 26/417 (6%)

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           N LI +   +G    A + +  L + G KP  +T+N +++ + +  K+D A  + R M E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G S D  T      A CK G   EA  +++   ++    NTI  N ++  LC     +E
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEE 326

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   LN         +  +Y  L+ G    ++  R  ++   M      PS   +N+++ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF------HNKMV 352
              +S     A  +L ++ +    P    +N +I   CS G++   + F      +N+M+
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                 + V        LC  G  EKA K     +  G   D+ TY+ +I  LC   R+E
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           +AF L  EM+   + PD YTY  +     ++G +++A  +   MV  G            
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG------------ 554

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 +P+ ++Y+  I+ +    +   A ++FE    KG   N  TY  L++G  K
Sbjct: 555 -----CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 188/371 (50%), Gaps = 3/371 (0%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G  PN  T+N+L++  CK G +K+A  + D + +    P   ++N LING+C +G LEE 
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           FRL+  ME  ++ PDV TY+ LI+   +  +  +A  L  E+ + G+ PN VT   +I  
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CK G++D A +I + M   G   D V YNTLID  CK G   EA + +  M ++GL  +
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
             T  T+L   C E  L+ A  +     K G  LD V++  +I+G  RD K   A +   
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM    + P   TY  ++ G  + G  +    +L E+   G IP   T+N +++G C +G
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           QV+ A    N M+     PD +T NILL G C+ G   K   F       G   D  +Y 
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHG---KLGDFQNVKTEMGLVSDYASYR 583

Query: 400 TLISSLCKERR 410
           +L+  L K  +
Sbjct: 584 SLLHELSKASK 594



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 200/368 (54%), Gaps = 3/368 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  T+N +++ L K+GK+ + + +  +++K GL P   ++N L++GYCK G L+E 
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+  +M + +  PDV+TY+ LI+G C    LE+A  L KEM    L+P+ VT+ TLIN 
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR   A ++  ++   G+K + V +N +I   CK G   +A K V  M + G  PD
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TL+D +CK G++E A  M   M ++G++++ +    I+  LC + K+ +A   L 
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D+ +Y  ++ G+ +        KL  EM+    +P   TYN ++ GL + G
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + + A  +LN +L  G++PD+ T+N ++ G C  G++     F N   E     D  +  
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLG---DFQNVKTEMGLVSDYASYR 583

Query: 365 ILLSGLCR 372
            LL  L +
Sbjct: 584 SLLHELSK 591



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 232/468 (49%), Gaps = 34/468 (7%)

Query: 76  SLPDVWTYNMLINGWCNAGMLEEA---FRLRKEMESLKLLPDVVTYN---TLINRFFESG 129
           +L   + ++ L++ +   G + +A   FRL K+  +LK     + +N    L+ R  +  
Sbjct: 158 TLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK-HNLK-----IPFNGCKCLLERMIKMS 211

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
             M A +   E+ + G  PN  T N+++   CKEGK+  A  I   + + G  P  V++N
Sbjct: 212 SPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFN 271

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI+  CK+GN+EE FR+  VM    +  +  T + ++  LC E +L++A  L      R
Sbjct: 272 TLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDR 331

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   ++V++ TLI G  ++ + + AL+++ +M  + +      YN +I GL + G   +A
Sbjct: 332 GLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREA 391

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
              + E+ + G+IPD+ T+ T++ G C EG +E AL+   +MV++  + D V    ++SG
Sbjct: 392 RKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISG 451

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           LCR+G +  A +  R  +  G   D  TY  ++   CK+  ++  F LL EM+     P 
Sbjct: 452 LCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPG 511

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY  +   L + G+++ A    + M+  G +                 P  I+Y+  +
Sbjct: 512 VITYNVLMNGLCKQGQVKNADMLLNAMLNLGVV-----------------PDDITYNILL 554

Query: 490 NEHCSQGRYKDALQIFEETR-QKGIAINKSTYMNLMNGLIKRRKSISK 536
             HC  G+  D    F+  + + G+  + ++Y +L++ L K  K   K
Sbjct: 555 QGHCKHGKLGD----FQNVKTEMGLVSDYASYRSLLHELSKASKDRQK 598



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 3/308 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME F   PD  TY+ ++D L K+ +L +   L  +M  +GLVPN  T+  L++G CK G 
Sbjct: 293 MEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGR 352

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+ +   M       D+  YN LI+G C  G   EA +   EM    L+PD  TY T
Sbjct: 353 VDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTT 412

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   + G    A ++  E+ + GI+ + V    +I   C++GKI  A + +R M   G
Sbjct: 413 LLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAG 472

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  ++D  CK G+++  F+++  M   G     IT N +++ LC + ++  A 
Sbjct: 473 LKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNAD 532

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLLN+    G   D+++Y  L+ G+ +  K      +  EM    ++    +Y +++  L
Sbjct: 533 MLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMG---LVSDYASYRSLLHEL 589

Query: 301 SQSGKTEQ 308
           S++ K  Q
Sbjct: 590 SKASKDRQ 597



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 17/230 (7%)

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           +S+ GK   +    + L   G +     F+ ++  +   G V  A+Q      + + K  
Sbjct: 137 VSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIP 196

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
              C  LL  + +      AL+F+   +  G   +  T+N L++ LCKE +++DA  +  
Sbjct: 197 FNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           E+ +  L P   ++  +     +SG LEE  +   +M E                   + 
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEF-----------------RVF 299

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           P   +YS  I+  C + + +DA  +F+E   +G+  N  T+  L+NG  K
Sbjct: 300 PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCK 349


>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 218/426 (51%), Gaps = 1/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G +PD  +Y  +++ L K+G +     L+  M+  G   N  TYN LV G C  G 
Sbjct: 125 MVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGN 184

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L ++++++D +T+   +P+ +TY+ L+        ++EA +L  ++ +    P++V+YN 
Sbjct: 185 LNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNV 244

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+    + GR+ EA KL  EL   G  P+ V+ NI+++  C EG+ ++A +++  M++  
Sbjct: 245 LLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKED 304

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYN LI +    G  E+AF+++D M R G K +  + N I+  LC E K+D   
Sbjct: 305 QPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVL 364

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L+    R  + +E +Y   I+      K   A  +   +  +Q  P    Y  +I  L
Sbjct: 365 KCLDQMIHRRCHPNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASL 423

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G T  A  ML E+ + G  PD  T++++I G C EG +++AL+    + E   +PDI
Sbjct: 424 CRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDI 483

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
              N L+ G C+    + +++ F   + KG   +  TY  L+  L  E   + A  L+ E
Sbjct: 484 DNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKE 543

Query: 421 MEEKKL 426
           +  KK+
Sbjct: 544 LYLKKV 549



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 224/446 (50%), Gaps = 5/446 (1%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G G  P+      +L  L K  K  +   ++  M   G++P+  +Y  LV+  CK G + 
Sbjct: 92  GKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVG 151

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A+++V+ M  +    +  TYN L+ G C  G L ++ +L   +    L+P+  TY+ L+
Sbjct: 152 YAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLL 211

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
              ++     EA KL+D++   G +PN V++N+++   CKEG+ ++A K+ + +   GFS
Sbjct: 212 EAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFS 271

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P  V++N L+ + C  G  EEA  ++  M ++    + +T N ++ +L    + ++A+ +
Sbjct: 272 PSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKV 331

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L+  ++ G+     SY  +I    ++ K +  LK  D+M  R+  P+  TY+A I  LS+
Sbjct: 332 LDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSA-ISMLSE 390

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK ++A  ++  L      P    +  +I   C +G    A Q   +M +  F PD  T
Sbjct: 391 QGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYT 450

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            + L+ G+CREG+L++ALK FR         D   YN LI   CK +R + +  +   M 
Sbjct: 451 YSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMV 510

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEE 448
            K   P+  TY    T LVE    EE
Sbjct: 511 NKGCVPNENTY----TILVEGLAFEE 532



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 224/450 (49%), Gaps = 18/450 (4%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+V     L+   C      +A R+ + M    ++PD  +Y  L+N   + G    A +L
Sbjct: 97  PEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQL 156

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +++++ HG   N VT+N ++K  C  G ++++ +++  + + G  P+  TY+ L++A  K
Sbjct: 157 VEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYK 216

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
              ++EA +++D +  KG + N ++ N +L  LC E + +EA  L      +G+    VS
Sbjct: 217 ERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVS 276

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  L+     + +   A +L  EM +    PS  TYN +I  LS +G+TEQA  +L+E+ 
Sbjct: 277 FNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMT 336

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           +SG     T++N II   C EG+V+  L+  ++M+ +   P+  T +  +S L  +G ++
Sbjct: 337 RSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSA-ISMLSEQGKVQ 395

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A    +S   K        Y  LI+SLC++     AF +L EM +    PD YTY+++ 
Sbjct: 396 EAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLI 455

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             +   G L+EA K   I+ E    +H+              P   +Y+  I   C   R
Sbjct: 456 RGMCREGMLDEALKIFRILEEN---DHR--------------PDIDNYNALILGFCKAQR 498

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              +++IF     KG   N++TY  L+ GL
Sbjct: 499 TDLSIEIFLMMVNKGCVPNENTYTILVEGL 528



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 195/400 (48%), Gaps = 18/400 (4%)

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R  +AF  ++ L   G KP       ++   CK  K  KA +++  M  +G  PD  +Y 
Sbjct: 79  RIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYT 138

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            L++  CK GN+  A ++++ M   G   NT+T NT++  LC    L+++  LL+  +K+
Sbjct: 139 HLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKK 198

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   +  +Y  L+   +++   + A+KL D++  +   P+  +YN ++ GL + G+TE+A
Sbjct: 199 GLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEA 258

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           I +  EL   G  P   +FN ++   C EG+ E+A +   +M ++   P +VT NIL++ 
Sbjct: 259 IKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITS 318

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           L   G  E+A K        G    + +YN +I+ LCKE +++     L +M  ++  P+
Sbjct: 319 LSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPN 378

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKI 489
             TY+AI + L E G+++EA  F  I     K N                P    Y   I
Sbjct: 379 EGTYSAI-SMLSEQGKVQEA--FFIIQSLGSKQNF---------------PMHDFYKNLI 420

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              C +G    A Q+  E  + G   +  TY +L+ G+ +
Sbjct: 421 ASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCR 460



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 162/328 (49%), Gaps = 17/328 (5%)

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K   + +AF  ++ +  KG K        +L+ LC   K  +A  ++      G  
Sbjct: 72  DQKGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGII 131

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  SY  L+    +      A++L ++M+      +T TYN ++ GL   G   Q++ +
Sbjct: 132 PDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQL 191

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L+ L + G+IP+  T++ ++     E  V++A++  + ++ K  +P++V+ N+LL+GLC+
Sbjct: 192 LDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCK 251

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           EG  E+A+K F+   +KG +   V++N L+ SLC E R E+A  LL+EM+++   P   T
Sbjct: 252 EGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVT 311

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  + T+L  +GR E+A K    M  +G                    S+ SY+  I   
Sbjct: 312 YNILITSLSLNGRTEQAFKVLDEMTRSG-----------------FKASATSYNPIIARL 354

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTY 520
           C +G+    L+  ++   +    N+ TY
Sbjct: 355 CKEGKVDLVLKCLDQMIHRRCHPNEGTY 382



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 17/263 (6%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           KA +A+++ + M    I+P   +Y  ++  L + G    AI ++ ++   G   +  T+N
Sbjct: 114 KARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYN 173

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G C  G + ++LQ  +++ +K   P+  T + LL    +E  +++A+K     I K
Sbjct: 174 TLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAK 233

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   + V+YN L++ LCKE R E+A  L  E+  K   P   ++  +  +L   GR EEA
Sbjct: 234 GGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEA 293

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            +   ++ E  K              E+  PS ++Y+  I      GR + A ++ +E  
Sbjct: 294 NE---LLAEMDK--------------EDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMT 336

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
           + G   + ++Y  ++  L K  K
Sbjct: 337 RSGFKASATSYNPIIARLCKEGK 359



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 56/112 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  PD+ TY++++  + ++G L+E   +   +++    P+   YN L+ G+CK   
Sbjct: 439 MTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQR 498

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL 112
              ++ +  +M     +P+  TY +L+ G       + A  L KE+   K+L
Sbjct: 499 TDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELYLKKVL 550


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 218/436 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T N +++   +  +++    +L+   K GL P   T+  L++G  K+G 
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ + D M      PD +TY  +ING C  G    A  L K+ME      +VVTY+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +  R  EA  +   +    I P   T+  +I+  C   +  +A  ++  M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+N L+D  CK G +  A  ++  M   G++ + +T N++++      ++ EA 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   D  SY  LI GY + ++ + A +L++EM  +   P+  +YN +I GL
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q G+  +A D+   +  +G +P+  T+  ++ GFC +G + KA +    M     KP++
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  NIL++ +C+ G L+ A + F    + G   +   Y T+I+ LCKE  L++A      
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 421 MEEKKLGPDRYTYAAI 436
           ME+    PD ++Y  I
Sbjct: 421 MEDDGCPPDEFSYNVI 436



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 217/431 (50%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P  VT+ T+++ L K GK  +  +L  DM  +G  P+  TY  +++G CK+G    
Sbjct: 39  LGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETAL 98

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  +   M +     +V TY+ LI+  C    + EA  +   M++  + P + TY +LI 
Sbjct: 99  AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                 R  EA  L++E+    I PN VT N+++  +CKEGK+  A  +++ M E G  P
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VTYN+L+        + EA ++ DVM  KG K +  + + +++  C  K++DEA  L 
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N    +G   + VSY TLI G  +  +   A  L+  M     +P+ +TY  ++ G  + 
Sbjct: 279 NEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQ 338

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   +A  +   +  + + P+   +N +++  C  G ++ A +  +++     +P++   
Sbjct: 339 GYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIY 398

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
             +++GLC+EG+L++AL+ FR+    G   D  +YN +I    + +    A  L+ EM +
Sbjct: 399 TTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRD 458

Query: 424 KKLGPDRYTYA 434
           +    D  T A
Sbjct: 459 RGFITDAGTTA 469



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 224/461 (48%), Gaps = 18/461 (3%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+  T N+LIN +C    ++  F +  +   L L P +VT+ TLIN   + G+  +A +L
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            D++   G +P+  T+  +I   CK G+   A  + + MEE G   + VTY+TLI + CK
Sbjct: 68  FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
              + EA  +   M  K +     T  +++  LC   +  EA  LLN  +      + V+
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  L+  + ++ K   A  +   M E  + P   TYN++++G S   +  +A  + + ++
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G  PD  +++ +I+G+C   ++++A Q  N+M+ +   P+ V+ N L+ GLC+ G L 
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A   F++    G   +  TY  L+   CK+  L  AF L   M+   L P+   Y  + 
Sbjct: 308 EAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
            A+ +SG L++A++  S +   G      +QPN              Y+  IN  C +G 
Sbjct: 368 NAMCKSGNLKDARELFSELFVIG------LQPNVQ-----------IYTTIINGLCKEGL 410

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
             +AL+ F      G   ++ +Y  ++ G ++ +   S+AV
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDE-SRAV 450



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 206/424 (48%), Gaps = 17/424 (4%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           ME   L P+  T N LIN F +  R    F ++ +  + G++P  VT   +I    K GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
             +A ++  +M   G  PD  TY T+I+  CK G    A  +   M   G ++N +T +T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++H+LC  ++++EA  + +    +       +Y +LI G     +   A  L +EM    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           IMP+  T+N ++    + GK   A  +L  + + G+ PD  T+N++++G+    +V +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +  + M+ K  KPD+ + +IL++G C+   +++A + F   I +G   ++V+YNTLI  L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           C+  RL +A  L   M      P+ YTYA +     + G L +A +    M  T      
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQST------ 354

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       + P+ + Y+  +N  C  G  KDA ++F E    G+  N   Y  ++N
Sbjct: 355 -----------YLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIIN 403

Query: 526 GLIK 529
           GL K
Sbjct: 404 GLCK 407



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 182/362 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC  + VTY+T++ +L K  ++NE  D+ S MK + + P   TY  L+ G C    
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEA  +++ MT    +P+V T+N+L++ +C  G +  A  + K M  + + PDVVTYN+
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  +      +EA KL D +   G KP+  +++I+I  YCK  +ID+A ++   M   G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+ V+YNTLI   C+ G + EA  +   M   G   N  T   +L   C +  L +A+
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L  +        + V Y  L+    +      A +L+ E+    + P+   Y  +I GL
Sbjct: 346 RLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGL 405

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G  ++A++    +   G  PDE ++N II GF       +A+    +M ++ F  D 
Sbjct: 406 CKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDA 465

Query: 361 VT 362
            T
Sbjct: 466 GT 467


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 235/464 (50%), Gaps = 7/464 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  ++  ++   FK G        L  M + GL PN   YN L+S  CK G 
Sbjct: 20  MKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGM 79

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA   +  M Q+ + P+V +YN++I+G+C A  +E+A    +EME L   P    Y++
Sbjct: 80  LAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSS 138

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++  F ++G   +A  +  E+   G +P+ V  N+++    +  KI +A ++ R+M   G
Sbjct: 139 IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTYNT+I   CK   ++EA  +++ M ++ +    +T  T++  LC   +L +AY
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258

Query: 241 MLLNSASKRGYYLDEVSYGT--LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            +    ++      E +Y    LI G  +  +   A +++ EM+ R I P+  TYN ++ 
Sbjct: 259 EVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 318

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL  + K + A+++   +L     P+  T+  +I   C   QVE+A +  + M +K F P
Sbjct: 319 GLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVP 378

Query: 359 DIVTCNILLSGLCREGILEKALKFFR--SWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            +    +LLS L R G L+ A + ++  S I   + V S   N L+  + +   +++A  
Sbjct: 379 SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGS--SNILLDGILRRGSVDEAKD 436

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            L +M +  + PD++TY  +   L   G+ ++A+K    +V  G
Sbjct: 437 FLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 230/483 (47%), Gaps = 20/483 (4%)

Query: 32  LLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWC 91
           ++ +MK  G  P+  ++ +L+ G+ K G  +     +D M +    P+   YN LI+  C
Sbjct: 16  IVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLC 75

Query: 92  NAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAV 151
            AGML EA    K M      P+VV+YN +I+ + ++    +A   + E++E G  P   
Sbjct: 76  KAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPH 134

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            ++ +++ +CK G + KA  +   M   G  PD V +N L+    +A  + EA  +   M
Sbjct: 135 AYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSM 194

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
             +G K + +T NT++  LC  KKLDEA  LL    +       V+Y TLI    +  + 
Sbjct: 195 NSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARL 254

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIW--GLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
            +A +++++M E     +   Y+ +I   GL ++ +  +A +M  E+   G+ P   T+N
Sbjct: 255 QQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYN 314

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           T++ G  S  +++ A++    M+++   P++ T  IL+S LC+   +E+A K   +   K
Sbjct: 315 TLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDK 374

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G       +  L+S L +  RL+DAF L  EM          +   +   ++  G ++EA
Sbjct: 375 GFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEA 434

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           + F   M +TG                 I P   +Y + +   C QG+   A ++ EE  
Sbjct: 435 KDFLKQMTDTG-----------------IVPDKFTYDKLVVGLCWQGKADQARKLVEELV 477

Query: 510 QKG 512
           + G
Sbjct: 478 RDG 480



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 187/410 (45%), Gaps = 20/410 (4%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I +  E+    +A  +++E+   G  P+  +H ++I+ + K G   + C  +  M E G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+ + YN LI   CKAG + EA   +  M +     N ++ N I+   C  + +++A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            L    + G+     +Y +++  + +    ++A+ ++ EM  +   P    +N ++ GL 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           ++ K  +A ++   +   G  PD  T+NT+I G C   ++++A+    +M ++   P  V
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT--LISSLCKERRLEDAFGLLS 419
           T   L+  LC+   L++A + F              Y+   LI+ LCK RR  +A  +  
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID 479
           EM  + + P   TY  +   L+ + +L++A + T  M++      QV  PN         
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLD------QVPAPNM-------- 345

Query: 480 PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               +Y   I+  C   + ++A ++    R KG   +   +  L++ L +
Sbjct: 346 ---FTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLAR 392



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 167/367 (45%), Gaps = 51/367 (13%)

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           + +A  IV  M+  GFSPD  ++  LI    K+G+ +     +D M   GL  N I  N 
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++  LC      +A ML  + S    YL  +                           + 
Sbjct: 70  LISCLC------KAGMLAEAES----YLKRMP--------------------------QH 93

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P+  +YN +I G  ++   E+A+  L E+ + G  P    +++I+  FC  G V KA+
Sbjct: 94  CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAM 153

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
               +M  K  +PDIV  N+LLSGL R   + +A + FRS   +G   D VTYNT+I+ L
Sbjct: 154 DVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGL 213

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK ++L++A  LL  M+++ + P   TY  +   L +  RL++A +    M E       
Sbjct: 214 CKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEG------ 267

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
              P     P      + S    IN  C   R  +A ++F+E R +GI+    TY  L+ 
Sbjct: 268 ---PCPCTEP------AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 318

Query: 526 GLIKRRK 532
           GL+   K
Sbjct: 319 GLLSTAK 325


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 260/515 (50%), Gaps = 18/515 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D+  +  +   LF++ K +EV  L + +  +G+V   TTY ++V G C  G   +A
Sbjct: 14  GAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA 73

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V  ++   + P V+ YN +I G C A  + +A+++ ++M    ++P+V TY  L+N 
Sbjct: 74  LELVRELSGVYT-PTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNG 132

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              S ++  A ++  E+  +G KPN +T+  +I+   + G+ID+A +++          D
Sbjct: 133 LCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL- 243
            +T  T++   CKA  +++A + M+ M + G++ N +T + ++H      +LD       
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              +++G  L+  +Y   +    +    +RA K  +E+++  ++P   TY+ +I   +++
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + ++++L ++ ++G+ PD  T++T+I+  C E + + A +    M      P++VT 
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++ GLC+ G +++  + +   +    + D VTY+ +++ L K   L+ A  L   ++ 
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
            + GPD   Y+ + T+L  +G+LEEA      M  T      V   N  +          
Sbjct: 433 SREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVT------VAGDNICR---------- 476

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
           + +  +   C   R   A +I E  R++G  + KS
Sbjct: 477 ALAGLVAALCDAKRTDSARRIVEVARERGHRVTKS 511



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 195/419 (46%), Gaps = 23/419 (5%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D   +  L  + F   +  E  +L   L   G+     T+ +++   C  G  ++A ++V
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R +    ++P    YN +I   C+A  + +A+++++ M  + +  N  T   +L+ LC  
Sbjct: 78  RELS-GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRS 136

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K   A  +     + G   + ++YGTLI    R  + + AL++  E +  ++     T 
Sbjct: 137 NKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             ++ GL ++ + + A+  + E+ Q G+ P+E T++ ++HGF   G++++ ++F  +  E
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE--E 254

Query: 354 KSFKPDIVTCNIL---LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           K+ K   +        L  LC+ G L++A K        G   D VTY+ LI++  +  +
Sbjct: 255 KARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ 314

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
            + +  LL +M    + PD  TY+ +   L +  + ++A +   +M   G          
Sbjct: 315 FDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG---------- 364

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +P    P+ ++Y+  ++  C  G+  +  +++E   +   + +  TY  +MNGL K
Sbjct: 365 ---SP----PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSK 416



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 165/361 (45%), Gaps = 21/361 (5%)

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R++ E G   D   +  L     +     E  R+  ++  +G+     T   ++  LC  
Sbjct: 8   RSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67

Query: 234 KKLDEAYMLLNSASKRGYYLDEV-SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
              ++A  L+   S  G Y   V  Y  +ITG  R  +   A K+ ++M E  I+P+ FT
Sbjct: 68  GMANQALELVRELS--GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           Y  ++ GL +S KT+ A ++  E+ ++G  P+  T+ T+I      G++++AL+   +  
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQR 185

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                 D++TC  ++ GLC+   L+ ALKF       G   + VTY+ L+    +   L+
Sbjct: 186 SLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELD 245

Query: 413 DAFGLLSEMEEKKLGP-DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
                  E + +K G  +   Y     AL ++G L+ A+K    + ++G +         
Sbjct: 246 RVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVV--------- 296

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                   P  ++YS  IN     G++  +L++ E+ R+ G+  +  TY  L+N L K R
Sbjct: 297 --------PDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKER 348

Query: 532 K 532
           K
Sbjct: 349 K 349



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 185/402 (46%), Gaps = 22/402 (5%)

Query: 134 AFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           A KL++  + E G K ++    ++     +  K  +  ++   +   G      TY  ++
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITL-NTILHTLCCEKKLDEAYMLLNSASKRGY 251
           D  C AG   +A  ++  +   G+   T+ + N I+  LC   ++ +AY +L    +   
Sbjct: 62  DGLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y  L+ G  R  K   A +++ EMK     P+  TY  +I  LS++G+ ++A+ 
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ E     +  D  T  TI+ G C   +++ AL+F  +M +   +P+ VT + L+ G  
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 372 REGILEKALKFFRSW-ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           + G L++ ++FF      KG ++++  Y   + +LCK   L+ A   + E+ +  + PD 
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ +      +G+ + + +    M   G                 + P  ++YS  IN
Sbjct: 300 VTYSMLINTFARAGQFDASLELLEDMRRNG-----------------VKPDVVTYSTLIN 342

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             C + +++DA ++ E     G   N  TY ++M+GL K  K
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 63/107 (58%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYN+++D L K GK++EV  +   M K    P+  TY+I+++G  K G 
Sbjct: 360 MEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGM 419

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           L  A+++ +L+  ++  PD   Y+M+I   C AG LEEA  +   ME
Sbjct: 420 LDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 241/518 (46%), Gaps = 24/518 (4%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           YN ++DAL ++  +  V  +  +M+K G+ PN  TYN+LV   C+   +  A +++D M 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV-VTYNTLINRFFESGRS 131
                PD  TY  +++  C  G ++EA       E L   P V  +YN +I       R 
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEA------TEVLSAAPPVAASYNAVILALCREFRM 250

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            E F ++ ++   G++PN +T+  ++  +CK G++  AC I+  M   G +P+  T+  L
Sbjct: 251 QEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTAL 310

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +      G + +A  M   M  +G   +T++ N ++  LC    L  A  +LN   + G 
Sbjct: 311 VGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGC 370

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
           + +  +Y TLI G+ +    + A+ +W++M      P+   Y  M+    +     QA  
Sbjct: 371 FPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAES 430

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +++++L     P+  TFNT+I   C+  +V +AL   ++M      P+  T N LL GL 
Sbjct: 431 LIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLF 490

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           REG    AL+        G  +  VTYNT++S LC+ R   +A   +  M  + + PD +
Sbjct: 491 REGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           T+ AI  A  + G +  A      M             N       I    + Y+  + E
Sbjct: 551 TFTAIIHAYCKEGEVRMAAWILGAM-------------NVVNCGRNI----LVYTILMAE 593

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            C+Q + +DA+    +   +GI  N  T+  L+ G+ +
Sbjct: 594 LCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFR 631



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 209/431 (48%), Gaps = 30/431 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLS------------------------------ 34
           GC PD+VTY TI+ AL   G+++E  ++LS                              
Sbjct: 199 GCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVG 258

Query: 35  DMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG 94
           DM  +GL PN  TY  +V+ +CK G L+ A  ++  M      P+V T+  L+ G  N G
Sbjct: 259 DMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDG 318

Query: 95  MLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHN 154
            + +A  + K M +    P  V+YN LI      G    A  +++++++HG  PNA T++
Sbjct: 319 RVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYS 378

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
            +I  + K G +D A  I  +M  +G  P+ V Y  ++   CK     +A  ++D M  +
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVE 438

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
               NT+T NT++ +LC  +++  A  + +   + G   +  +Y  L+ G FR+     A
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDA 498

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           L++  EM+   I  S  TYN ++ GL Q     +A+  +  ++  G+ PD  TF  IIH 
Sbjct: 499 LQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHA 558

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           +C EG+V  A      M   +   +I+   IL++ LC +  LE A+ +    + +G   +
Sbjct: 559 YCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPN 618

Query: 395 SVTYNTLISSL 405
           +VT+N L+  +
Sbjct: 619 TVTWNVLVRGV 629



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 225/467 (48%), Gaps = 11/467 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN ++ AL +  ++   R +L +M  +G  P+  TY  +VS  C LG + EA
Sbjct: 164 GVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEA 223

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V+     + + P   +YN +I   C    ++E F +  +M    L P+V+TY T++N 
Sbjct: 224 TEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNA 278

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++G    A  ++  +   G  PN  T   ++     +G++  A  + + M   G++P 
Sbjct: 279 FCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPS 338

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V+YN LI   C  G+++ A  +++ M + G   N  T +T++        LD A  + N
Sbjct: 339 TVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWN 398

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   + V Y  ++  + +    N+A  L D+M      P+T T+N +I  L    
Sbjct: 399 DMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCR 458

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           +  +A+ + +E+ + G  P+  T+N ++HG   EG    ALQ   +M     +  +VT N
Sbjct: 459 RVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYN 518

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            ++SGLC+  +  +A+ F    I++G   D+ T+  +I + CKE  +  A  +L  M   
Sbjct: 519 TVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVV 578

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
             G +   Y  +   L    +LE+A      MV   K+ ++ + PNT
Sbjct: 579 NCGRNILVYTILMAELCNQDKLEDA------MVYLLKMLYEGIYPNT 619



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/537 (25%), Positives = 236/537 (43%), Gaps = 32/537 (5%)

Query: 20  LFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR-----VVDLMTQN 74
           L   G ++ V+  L +M+ +G+          V  + + G    A++     V DL    
Sbjct: 71  LAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCAR 130

Query: 75  KSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
            + P +  YN LI+      M+     +   M    + P+V TYN L+    ++ R   A
Sbjct: 131 PTAPRL--YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAA 188

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
            K++DE+   G  P+ VT+  ++   C  G++D+A +++     +   P   +YN +I A
Sbjct: 189 RKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASYNAVILA 243

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C+   M+E F ++  M  +GL+ N IT  TI++  C   +L  A  +L      G   +
Sbjct: 244 LCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPN 303

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             ++  L+ G F D + + AL +W  M      PST +YN +I GL   G  + A  +LN
Sbjct: 304 VATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLN 363

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           ++ Q G  P+  T++T+I GF   G ++ A+   N M     KP++V    ++   C++ 
Sbjct: 364 DMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKL 423

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
           +  +A       +++    ++VT+NTLI SLC  RR+  A G+  EM      P+  TY 
Sbjct: 424 MFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYN 483

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP------------------- 475
            +   L   G   +A +   I ++   I   +V  NT  +                    
Sbjct: 484 ELLHGLFREGNCGDALQMV-IEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIV 542

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             I P + +++  I+ +C +G  + A  I           N   Y  LM  L  + K
Sbjct: 543 RGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDK 599



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 177/372 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ +TY TI++A  K G+L     +L+ M   G  PN  T+  LV G    G 
Sbjct: 260 MVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGR 319

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M      P   +YN+LI G C+ G L+ A  +  +ME     P+  TY+T
Sbjct: 320 VHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYST 379

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++G    A  + +++   G KPN V +  M+  +CK+   ++A  ++  M    
Sbjct: 380 LIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVEN 439

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NTLI + C    +  A  +   M R G   N  T N +LH L  E    +A 
Sbjct: 440 CPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDAL 499

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++      G  L  V+Y T+++G  +      A+     M  R I P  FT+ A+I   
Sbjct: 500 QMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAY 559

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+   A  +L  +       +   +  ++   C++ ++E A+ +  KM+ +   P+ 
Sbjct: 560 CKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNT 619

Query: 361 VTCNILLSGLCR 372
           VT N+L+ G+ R
Sbjct: 620 VTWNVLVRGVFR 631



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC P+  TY+T++D   K G L+    + +DM + G  PN   Y  +V  +CK   
Sbjct: 365 MEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLM 424

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  ++D M      P+  T+N LI   CN   +  A  +  EM      P+  TYN 
Sbjct: 425 FNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNE 484

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++  F  G   +A +++ E+  HGI+ + VT+N ++   C+     +A   V  M   G
Sbjct: 485 LLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRG 544

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T+  +I A CK G +  A  ++  M       N +    ++  LC + KL++A 
Sbjct: 545 IQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAM 604

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
           + L      G Y + V++  L+ G FR+   N
Sbjct: 605 VYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCN 636


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 210/415 (50%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V +  +L ++ K    + V  L + M   G+ P+  T NIL++ +C L  L  A  V
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  + +    PD  T+N LI G C  G + EA  L  +       PDVVTY TL+N   +
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G +  A +L+  + +   +PN + +N +I   CK+ ++ +A  +   M   G SPD  T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI A C     +    +++ M    +  N +  +T++  LC E  +  A+ +++   
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KRG   D V+Y  L+ G+    + + A+K++D M  +  +P+  +YN +I G  Q  + +
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ +L ++   G+I D  T+NT+IHG C  G+++ A+   ++MV     PD+VT  ILL
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             LC+   L +A+   ++        D + YN  I  +C+   LE A  L S + 
Sbjct: 470 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 524



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 201/392 (51%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+ FG  PD  T N ++++     +L     +L+ + K G  P+ TT+N L+ G C  G 
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ + D        PDV TY  L+NG C  G    A RL + M      P+V+ YNT
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +  +  EAF L  E+   GI P+  T+N +I   C   +      ++  M  + 
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ V ++T++DA CK G +  A  ++D+M ++G++ + +T   ++   C   ++DEA 
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + ++   +G   +  SY  LI GY + ++ ++A+ L ++M  + ++  T TYN +I GL
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G+ + AI + +E++ SG IPD  T+  ++   C    + +A+     +   +   DI
Sbjct: 438 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 497

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKA 392
           +  NI + G+CR G LE A   F +   +G A
Sbjct: 498 LVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 213/454 (46%), Gaps = 17/454 (3%)

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+   + M      P    +  L+              L  +M+S  + PDV T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F    R   AF ++ +L + G +P+  T N +I+  C EGKI +A  +       G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD VTY TL++  CK GN   A R++  M +K  + N I  NTI+ +LC ++++ EA+
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +    +G   D  +Y +LI       +      L +EM   +IMP+   ++ ++  L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G    A D+++ +++ G+ PD  T+  ++ G C   ++++A++  + MV K   P++
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + NIL++G C+   ++KA+       L+G   D+VTYNTLI  LC   RL+ A  L  E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M      PD  TY  +   L ++  L EA      MV    I               +D 
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEA------MVLLKAIE-----------GSNLDA 495

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
             + Y+  I+  C  G  + A  +F     +G A
Sbjct: 496 DILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 204/417 (48%), Gaps = 10/417 (2%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL---PDVWTYNMLINGWCNAGMLEEA 99
           P+   +  L++   K+   K    V+ L TQ  S    PDV+T N+LIN +C+   L  A
Sbjct: 110 PSTVDFTKLLTSIAKM---KHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYA 166

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           F +  ++  L   PD  T+NTLI      G+  EA  L D+    G +P+ VT+  ++  
Sbjct: 167 FSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNG 226

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            CK G    A +++R+M +    P+ + YNT+ID+ CK   + EAF +   M  KG+  +
Sbjct: 227 LCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 286

Query: 220 TITLNTILHTLC--CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
             T N+++H LC  CE K      LLN         + V + T++    ++     A  +
Sbjct: 287 IFTYNSLIHALCNLCEWK--HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 344

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            D M +R + P   TY A++ G     + ++A+ + + ++  G +P+  ++N +I+G+C 
Sbjct: 345 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 404

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
             +++KA+    +M  +    D VT N L+ GLC  G L+ A+  F   +  G+  D VT
Sbjct: 405 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 464

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           Y  L+  LCK   L +A  LL  +E   L  D   Y      +  +G LE A+   S
Sbjct: 465 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 521



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           LD+A    N           V +  L+T   + +  +  L L  +M    I P  +T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I       +   A  +L +LL+ G  PD TTFNT+I G C EG++ +AL   +K + + 
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           F+PD+VT   L++GLC+ G    A++  RS + K    + + YNT+I SLCK+R++ +AF
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTAL----------------VESGRLEEAQKFTSIMVET 459
            L SEM  K + PD +TY ++  AL                V S  +     F++++   
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 460 GK-----INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            K     I H VV     +    ++P  ++Y+  ++ HC +    +A+++F+    KG  
Sbjct: 333 CKEGMIAIAHDVVDMMIKR---GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 515 INKSTYMNLMNG 526
            N  +Y  L+NG
Sbjct: 390 PNVRSYNILING 401



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 163/356 (45%), Gaps = 17/356 (4%)

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M+  G  PD  T N LI++ C    +  AF ++  + + G + +  T NT++  LC E K
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + EA  L +     G+  D V+YGTL+ G  +    + A++L   M ++   P+   YN 
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L +  +  +A ++ +E++  G+ PD  T+N++IH  C+  + +      N+MV   
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             P++V  + ++  LC+EG++  A       I +G   D VTY  L+   C    +++A 
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            +   M  K   P+  +Y  +     +  R+++A      M   G I             
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI------------- 424

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
                 +++Y+  I+  C  GR + A+ +F E    G   +  TY  L++ L K  
Sbjct: 425 ----ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH 476



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 86/221 (38%), Gaps = 17/221 (7%)

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A+   N +L     P    F  ++            L    +M      PD+ T NIL
Sbjct: 94  DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 153

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           ++  C    L  A       +  G   D+ T+NTLI  LC E ++ +A  L  +   +  
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 213

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  TY  +   L + G    A +    MV+                 +   P+ I+Y+
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQ-----------------KNCRPNVIAYN 256

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             I+  C   +  +A  +F E   KGI+ +  TY +L++ L
Sbjct: 257 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297


>gi|297844018|ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335732|gb|EFH66149.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 237/452 (52%), Gaps = 11/452 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G + +  T+N ++ +  K+ KL E   +   M K G+ PN  ++N+++ G CK G 
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSFNMMIDGACKTGD 268

Query: 61  LKEAMRVVD---LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           ++ A++++    +M+ N   P+  TYN +ING+C AG L+ A R+R EM  L +  +  T
Sbjct: 269 MRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGEMVKLGVDCNERT 328

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y  L++ +  +G S EA +L DE+   G+  N V +N ++ W   EG  + A  ++R+M 
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDMV 388

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
                 D  T   ++   C+ G + EA      +  K L  + +  NT++H    +KKL 
Sbjct: 389 RKRMQIDGFTRAIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKLV 448

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
               +L S    G  LD + +GTLI GY ++ K  RA+ ++D M +    P+   YN+++
Sbjct: 449 CVDQILGSMLVHGLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIV 508

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GLS+ G    A  ++N +       D  T+NT+++G    G VE+A    ++M ++  +
Sbjct: 509 NGLSKRGMAGAAEAVVNAMES----KDTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGE 564

Query: 358 PDI--VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
             +  VT NIL++ LC+ G  EKA +  +  + +G   DS+TY TLI+S  K R  E+  
Sbjct: 565 KSVSLVTYNILINHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTLITSFSKNRGQEEVV 624

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALV--ESGR 445
            L   M  + + P  + Y +I   L+  E+GR
Sbjct: 625 ELHDYMILQGVTPHEHIYQSIVRPLLDGENGR 656



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 196/411 (47%), Gaps = 19/411 (4%)

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           E+D  G   N  T N++I  +CKE K+ +A  +   M + G  P+ V++N +ID  CK G
Sbjct: 208 EMDSLGYVENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSFNMMIDGACKTG 267

Query: 200 NMEEAFRM---MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           +M  A ++   M VM    +  N +T N++++  C   +LD A  +     K G   +E 
Sbjct: 268 DMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGEMVKLGVDCNER 327

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +YG L+  Y R   ++ AL+L DEM  + ++ +T  YN++++ L   G TE A+ +L ++
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDM 387

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           ++  M  D  T   ++ G C  G V +A++FH ++ EK    DIV  N L+    R+  L
Sbjct: 388 VRKRMQIDGFTRAIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKL 447

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
               +   S ++ G  +D++ + TLI    KE +LE A  +   M +    P+   Y +I
Sbjct: 448 VCVDQILGSMLVHGLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSI 507

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP--EEID--------------P 480
              L + G    A+   + M     + +  +   + K    EE D               
Sbjct: 508 VNGLSKRGMAGAAEAVVNAMESKDTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSV 567

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           S ++Y+  IN  C  G Y+ A ++ +   ++G+  +  TY  L+    K R
Sbjct: 568 SLVTYNILINHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTLITSFSKNR 618



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 135/294 (45%), Gaps = 25/294 (8%)

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKL 236
           EN F   CV  + L+D        ++A  +M ++M  +G K++       LH L      
Sbjct: 91  ENRFEASCVMIHLLVDWR----RFDDALSIMVNLMSVEGEKLSP------LHVLSG---- 136

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
                L+ S    G  LD   + +L+    ++  A  A ++ ++ +      S    N  
Sbjct: 137 -----LIRSYQACGSSLD--VFDSLVRACTQNGDAQGAYEVIEQTRTEGFWVSVHALNNF 189

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           +  L    + +    +  E+   G + +  TFN +I+ FC E ++ +AL    +M++   
Sbjct: 190 MGCLLNLNEIDWFWMVYKEMDSLGYVENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGI 249

Query: 357 KPDIVTCNILLSGLCREGILEKALKFF-RSWILKGKAV--DSVTYNTLISSLCKERRLED 413
            P++V+ N+++ G C+ G +  AL+   +  ++ G  V  ++VTYN++I+  CK  RL+ 
Sbjct: 250 WPNVVSFNMMIDGACKTGDMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDL 309

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           A  +  EM +  +  +  TY A+  A   +G  +EA +    M   G + + V+
Sbjct: 310 AERIRGEMVKLGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVI 363


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 240/460 (52%), Gaps = 11/460 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +  +G  P   + N +L  L     L+E   L  ++ ++    N  +YNIL+   C  G 
Sbjct: 217 LRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALCTAGR 268

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +K+A ++ D M    S PDV TY ++++G+C    LE A +L  EM +  L  + V Y +
Sbjct: 269 IKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I    + G+  +A ++++++  HG+  +A     ++  +C++G +  A      M++ G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + D VTY  LI+  C+AG ++EA R++  M  KGL ++ +T   ++   C   K+ EA+
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           ++ N   ++    + V+Y  L  G  +      A +L  EM  + +  + FTYN++I GL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G  EQA+  + ++ ++G+ PD  T+ TII   C   ++++A     +M++K  KP I
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT N+L++G C  G +E   +     + K    ++ TYN+L+   C E+ ++    +   
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  +++ P+  TY  +     ++  ++EA  F S M+E G
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 225/428 (52%), Gaps = 2/428 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY  ++       +L     LLS+M  +GL  N   Y  +++  C  G + +A+RV
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V+ M  +  + D   +  +++G+C  G L  A     EM+   L  D VTY  LIN    
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G   EA +++ E+++ G+  +AVT+ ++I  YCK GK+ +A  +   M +   +P+ VT
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  L D  CK G++  A  ++  M  KGL++N  T N++++ LC    L++A   +    
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D  +Y T+I    + ++ +RA  L  EM ++ I P+  TYN ++ G   SG+ E
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
               +L  +L+  + P+ TT+N+++  +C E  ++   + +  M+ +   P+  T NIL+
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G C+   +++AL F    I KG  + + +YN LI  L K+++  +A  L  +M + +L 
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLT 702

Query: 428 --PDRYTY 433
             PD Y +
Sbjct: 703 AEPDVYNF 710



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 225/451 (49%), Gaps = 5/451 (1%)

Query: 4   FGCLPDNVT--YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           F  LP+  T  YN +L AL   G++ +   L  +M      P+  TY I+V GYC L  L
Sbjct: 245 FQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSEL 301

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
           + A++++  M       +   Y  +I   C+ G + +A R+ ++M    ++ D   + T+
Sbjct: 302 ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTV 361

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++ F   G    A    DE+ + G+  + VT+  +I   C+ G++ +A ++++ ME+ G 
Sbjct: 362 MSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             D VTY  LID  CK G M EAF + + M +K +  N +T   +   LC +  +  A  
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           LL+    +G  L+  +Y +LI G  +     +A++   +M E  + P  +TY  +I  L 
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
           QS + ++A  +L E+L  G+ P   T+N +++GFC  G+VE   +    M+EK+  P+  
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 362 TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           T N L+   C E  ++   + ++  + +    +  TYN LI   CK R +++A    SEM
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            EK       +Y A+   L +  +  EA++ 
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRL 692



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 214/426 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   + V Y +++  L  +G++++   ++ DM   G+V +   +  ++SG+C+ G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A    D M +     D  TY  LING C AG L+EA R+ +EME   L  D VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ + + G+  EAF + +++ +  + PN VT+  +    CK+G +  A +++  M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +  TYN+LI+  CKAGN+E+A R M  M   GLK +  T  TI+  LC  K+LD A+
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL     +G     V+Y  L+ G+    +     +L + M E+ I P+T TYN+++   
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
                 +   ++   +L   ++P+E T+N +I G C    +++AL FH++M+EK F+   
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTA 670

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            + N L+  L ++    +A + F          +   YN  I     E  LE    L  E
Sbjct: 671 SSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDE 730

Query: 421 MEEKKL 426
           + E  L
Sbjct: 731 LVEVTL 736



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 211/453 (46%), Gaps = 60/453 (13%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA +L  EL E     N  ++NI++K  C  G+I  A ++    +E    PD VTY  ++
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQL---FDEMASPPDVVTYGIMV 292

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C    +E A +++  M  +GL++N +   +++  LC E ++ +A  ++      G  
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
           LD   + T+++G+ R      A   +DEM++R +     TY A+I GL ++G+ ++A  +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           L E+   G+  D  T+  +I G+C  G++ +A   HNKMV+K   P++VT   L  GLC+
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
           +G +  A +       KG  ++  TYN+LI+ LCK   LE A   + +M+E  L PD YT
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGK----INHQV---------------------- 466
           Y  I  AL +S  L+ A      M++ G     + + V                      
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 467 ---VQPNTSK------------------------TPEEIDPSSISYSEKINEHCSQGRYK 499
              + PNT+                           +E+ P+  +Y+  I  HC     K
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +AL    E  +KG  +  S+Y  L+  L K++K
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 168/357 (47%), Gaps = 35/357 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   D VTY  +++ L + G+L E   +L +M+ +GL  +  TY +L+ GYCK+G 
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 61  LKEAMRVVDLMTQNKSLPDV-----------------------------------WTYNM 85
           + EA  V + M Q +  P+V                                   +TYN 
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LING C AG LE+A R   +M+   L PDV TY T+I    +S     A  L+ E+ + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           IKP  VT+N+++  +C  G+++   +++  M E    P+  TYN+L+   C   NM+   
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            +   M  + +  N  T N ++   C  + + EA    +   ++G+ L   SY  LI   
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            + +K   A +L+++M++ ++      YN  I         E  + + +EL++  ++
Sbjct: 681 NKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 235/469 (50%), Gaps = 19/469 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL----KE 63
           P    +N IL +L K    + V  L   M+ +G+ PN    NIL+  +C+LG +     +
Sbjct: 84  PPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQ 143

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A    D +       D  +Y  LI+G C  G    A  L + ++   +  + V YNT+I 
Sbjct: 144 AFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIY 203

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              +     +AF L  E+   GI PN VT++ +I  +   GK+  A  +   +      P
Sbjct: 204 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKP 263

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D  T+N L+D  CK   M+E   +  +M ++G+  + +T N+++   C  K+++ A  + 
Sbjct: 264 DGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIF 323

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           N+ ++ G   D  SY  LI G+ + +K ++A+ L++EM  + I+P+  TYN++I GLS+S
Sbjct: 324 NTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKS 383

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+   A+ +++++   G+ P+  T+N+II       QV+KA+    K  ++  +P + T 
Sbjct: 384 GRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTY 443

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            IL+ GLC+               ++G  +   TYN +I   CK+   ++A  LLS+M++
Sbjct: 444 TILIDGLCK---------------VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKD 488

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
               P+  TY     +L+++   ++A+K    M+  G +N     P +S
Sbjct: 489 SSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPCSS 537



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 192/420 (45%), Gaps = 21/420 (5%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           + ++Y++    F  +    +A  L + L      P A   N ++    K         + 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAG----NMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
           + ME  G  P+    N LI   C+ G     + +AF   D +   G  ++ ++  T++H 
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
           LC   +   A  LL     +   L+ V Y T+I G  +D+  N A  L+ EM  + I P+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
             TY+A+I G    GK + AID+ N+++   + PD  TFN ++ GFC + ++++      
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFA 289

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M+++   PD+VT N L+ G C    +  A   F +    G   D  +YN LI+  CK +
Sbjct: 290 MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIK 349

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           +++ A  L +EM  K + P+  TY ++   L +SGR+  A +    M + G         
Sbjct: 350 KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG--------- 400

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + P+ ++Y+  I+      +   A+ +  + + +GI  +  TY  L++GL K
Sbjct: 401 --------VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 169/341 (49%), Gaps = 21/341 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ VTY+ ++   F  GKL +  DL + +  + + P+  T+NILV G+CK   +KE 
Sbjct: 225 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V  +M +   +PDV TYN L++G+C    +  A  +   M    + PD+ +YN LIN 
Sbjct: 285 KTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 344

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F +  +  +A  L +E+    I PN VT+N +I    K G+I  A ++V  M + G  P+
Sbjct: 345 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 404

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN++IDA  K   +++A  ++     +G++ +  T   ++  LC             
Sbjct: 405 ILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC------------- 451

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                GY +   +Y  +I G+ +    + AL L  +MK+   +P+  TY   I  L  + 
Sbjct: 452 --KVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNN 509

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           + ++A  +  E++  G++    ++       CS  ++ ++L
Sbjct: 510 ENDKAEKLFREMITRGLLNRSASYP------CSSMKIHQSL 544



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 186/396 (46%), Gaps = 22/396 (5%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           K N ++++     +     +D A  +   +     +P    +N ++ +  K+ +      
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107

Query: 207 MMDVMGRKGLKMNTITLNTILHTLC----CEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           +   M  +G+K N    N +++  C       ++ +A++  +     G++LD+VSYGTLI
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G  +  +   AL L   +  + +  +   YN +I+G+ +      A D+ +E++  G+ 
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           P+  T++ +I GF   G+++ A+   NK++ ++ KPD  T NIL+ G C++  +++    
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV 287

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F   + +G   D VTYN+L+   C  + +  A  + + M +  + PD  +Y  +     +
Sbjct: 288 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 347

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
             ++++A    + M                   + I P+ ++Y+  I+     GR   AL
Sbjct: 348 IKKVDKAMNLFNEM-----------------HCKNIIPNVVTYNSLIDGLSKSGRISYAL 390

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           Q+ ++   +G+  N  TY ++++ L K  + + KA+
Sbjct: 391 QLVDQMHDRGVPPNILTYNSIIDALFKTHQ-VDKAI 425



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 21/175 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN+I+DALFK  ++++   L++  K QG+ P+  TY IL+ G CK+  
Sbjct: 396 MHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV-- 453

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             E   +            V TYN++I+G+C  G+ +EA  L  +M+    +P+ VTY  
Sbjct: 454 --EGYDIT-----------VNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEI 500

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            I    ++  + +A KL  E+   G+   + +      + C   KI ++  +V++
Sbjct: 501 TIRSLLDNNENDKAEKLFREMITRGLLNRSAS------YPCSSMKIHQSLTMVQH 549


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 218/408 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   + VT + +++   + G  +    + S++ K+G  P+  T   L+ G C  G 
Sbjct: 95  MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+   D +       +  +Y  LING C  G  + A  + + ++   +  DVV YNT
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +     +AF    E+    I P  VT+N +I   C  G++  A  ++  M    
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P   T++ L+DA CK G ++EA  +  VM +K +K N +T N++++  C   ++++A 
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + N+ ++ G   D  SY  +I+G+ + +  + A+KL++EM  +QI P   TYN++I GL
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +SG+   A+ ++ E+   G  P+  T+N+++   C    V+KA++   K+ + + +P +
Sbjct: 395 CKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSV 454

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            T NIL++GLC+ G L+ A K F   ++ G  +D  TYNT+I   CK+
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 215/436 (49%), Gaps = 18/436 (4%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           P ++ +  ++    ++        L  +++ +GI  N VT +I+I  + + G    +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
             N+ + G+ PD +T  TLI   C  G++ +A    D +   G ++N ++  T+++ LC 
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
             +   A  +L     +   LD V Y T+I G  +D+  N A   + EM  ++I P+  T
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I GL   G+ + AI +L++++   + P   TF+ ++  FC EG+V++A      M+
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           +K  KP+IVT N L++G C    + KA   F +    G A D  +Y+ +IS  CK + ++
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI---------- 462
           +A  L  EM  K++ PD  TY ++   L +SGR+  A K    M + G+           
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426

Query: 463 -----NHQV---VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                NH V   ++  T      I PS  +Y+  IN  C  GR KDA ++FE+    G  
Sbjct: 427 DALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYN 486

Query: 515 INKSTYMNLMNGLIKR 530
           I+  TY  ++ G  K+
Sbjct: 487 IDVYTYNTMIKGFCKK 502



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 192/369 (52%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD +T  T++  L  KG +++       +   G   N+ +Y  L++G CK+G  K A+ +
Sbjct: 137 PDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEM 196

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  +       DV  YN +I+G C   ++ +AF    EM + ++ P VVTYNTLI     
Sbjct: 197 LRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCI 256

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  +A  L+ ++    I P   T +I++  +CKEGK+ +A  +   M +    P+ VT
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+L++  C    + +A  + + M + G+  +  + + ++   C  K +DEA  L     
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +  + D V+Y +LI G  +  + + ALKL  EM +R   P+  TYN+++  L ++   +
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVD 436

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +AI++L +L    + P   T+N +I+G C  G+++ A +    ++   +  D+ T N ++
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496

Query: 368 SGLCREGIL 376
            G C++G +
Sbjct: 497 KGFCKKGFV 505



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 207/430 (48%), Gaps = 36/430 (8%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+ Q    P +  +  ++     A        L ++ME   +  ++VT + LIN F + G
Sbjct: 59  LLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLG 118

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
            +  +F +   + + G +P+A+T   +IK  C +G I KA      +   GF  + V+Y 
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYR 178

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           TLI+  CK G  + A  M+  +  K ++++ +  NTI+  +C +K +++A+   +    +
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 250 GYYLDEVSYGTLITG-----------------------------------YFRDEKANRA 274
                 V+Y TLI G                                   + ++ K   A
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
             ++  M ++ + P+  TYN+++ G     +  +A  + N + Q G+ PD  +++ +I G
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
           FC    V++A++   +M  K   PD+VT N L+ GLC+ G +  ALK       +G+  +
Sbjct: 359 FCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FT 453
            +TYN+L+ +LCK   ++ A  LL+++++  + P   TY  +   L +SGRL++AQK F 
Sbjct: 419 IITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFE 478

Query: 454 SIMVETGKIN 463
            ++V    I+
Sbjct: 479 DVLVNGYNID 488



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 88/164 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  +Y+ ++    K   ++E   L  +M  + + P+  TYN L+ G CK G 
Sbjct: 340 MAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGR 399

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A++++  M      P++ TYN L++  C    +++A  L  +++   + P V TYN 
Sbjct: 400 ISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNI 459

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
           LIN   +SGR  +A K+ +++  +G   +  T+N MIK +CK+G
Sbjct: 460 LINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 52/277 (18%)

Query: 256 VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE 315
           + +G ++    +    +  + L  +M+   I  +  T + +I   SQ G    +  + + 
Sbjct: 70  IQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSN 129

Query: 316 LLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGI 375
           +L+ G  PD  T  T+I G C +G + KAL FH+K++   F+ + V+   L++GLC+ G 
Sbjct: 130 ILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQ 189

Query: 376 LEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAA 435
            + AL+  R    K   +D V YNT+I  +CK++ + DAF   SEM  K+          
Sbjct: 190 TKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR---------- 239

Query: 436 IHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQ 495
                                                     I P+ ++Y+  I   C  
Sbjct: 240 ------------------------------------------ICPTVVTYNTLICGLCIM 257

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           G+ KDA+ +  +   + I     T+  L++   K  K
Sbjct: 258 GQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 61/100 (61%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ +TYN++LDAL K   +++  +LL+ +K   + P+  TYNIL++G CK G 
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGR 469

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF 100
           LK+A +V + +  N    DV+TYN +I G+C  G +   F
Sbjct: 470 LKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509


>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
 gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
          Length = 800

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 260/543 (47%), Gaps = 28/543 (5%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
            Y+ ++ +    G L+E  + L  +K++G +P+  T+N L++     G +  A+ +    
Sbjct: 166 VYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIY--- 222

Query: 72  TQNKSL---PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
            Q KSL   P+ +TY+++I  +C  G L EA  + +EME   ++P+   Y T I     +
Sbjct: 223 KQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCAN 282

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
            RS   ++++    E  I  +   +  +I+ +C E K+D+A  ++ +ME+     D   Y
Sbjct: 283 QRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCY 342

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           + LI   CKAG++ +A  + + M  KG+K N + ++TIL   C +    +          
Sbjct: 343 SELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKD 402

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
              +LDEVSY  ++    + EK ++A+ L DEMK +Q+      Y  +I G    GK   
Sbjct: 403 LRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVD 462

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +  E+   G+ PD  TFN ++  F   G   +AL+ +  M  +  KP+ +T N+++ 
Sbjct: 463 AFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIE 522

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC  G + +A  FF +  ++ K++D+  Y  +I+  C+ +  E A  L  E+ E+ L  
Sbjct: 523 GLCIGGKVTEAEAFFCN--MEDKSIDN--YGAMITGYCEAKHTEKASELFFELSERGLLM 578

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVET---------GKINHQVVQPNTSKTPEEI- 478
           DR     +   L E G  + A      M++          GK+     +    +  E + 
Sbjct: 579 DRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVF 638

Query: 479 --------DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                    P   +Y+  IN  C Q R  +A  +F++ + +GI  +  T+  L++G +KR
Sbjct: 639 DILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKR 698

Query: 531 RKS 533
             S
Sbjct: 699 VHS 701



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 253/568 (44%), Gaps = 51/568 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK--- 57
           ++  G  P++ TY+ I+ A  +KG L E  ++  +M+  G++PN   Y   + G C    
Sbjct: 225 LKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQR 284

Query: 58  --LGW------------------------------LKEAMRVVDLMTQNKSLPDVWTYNM 85
              G+                              +  A  V+  M + + + D   Y+ 
Sbjct: 285 SDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSE 344

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           LI G+C AG L +A  L  +MES  +  + V  +T++  F E G   +  +      +  
Sbjct: 345 LIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLR 404

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I  + V++NI++   CK  K+D+A  ++  M+      D + Y TLI+  C  G + +AF
Sbjct: 405 IFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAF 464

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           R+ + M  KGL+ + +T N +L         +EA  L      +    + +++  +I G 
Sbjct: 465 RVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGL 524

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
               K   A   +  M+++ I      Y AMI G  ++  TE+A ++  EL + G++ D 
Sbjct: 525 CIGGKVTEAEAFFCNMEDKSID----NYGAMITGYCEAKHTEKASELFFELSERGLLMDR 580

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
                ++   C EG+ ++AL     M++ + +P       +++   R G +  A   F  
Sbjct: 581 GYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDI 640

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI---HTALVE 442
               G   D  TY T+I+  C++ RL +A  L  +M+ + + PD  T+  +   H   V 
Sbjct: 641 LRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVH 700

Query: 443 SGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDAL 502
           S     A+K   + +    I  ++   NT     EI P  I Y+  I+ HC   R +DA+
Sbjct: 701 SEAF--ARKRKEVNLAASNIWKEM--QNT-----EIRPDVICYTALIDGHCKVDRLEDAI 751

Query: 503 QIFEETRQKGIAINKSTYMNLMNGLIKR 530
            +++E   +G+  +++T   L++G   R
Sbjct: 752 GLYDEMMYRGVEPDRATCTALLSGCRNR 779



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 228/511 (44%), Gaps = 58/511 (11%)

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           +  Y+ L+  +  AGML+EA     +++    LP + T+N L+N+   +G+   A  +  
Sbjct: 164 IQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYK 223

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
           +L   G+ PN  T++I+IK +C++G + +A  + + ME  G  P+   Y T I+  C   
Sbjct: 224 QLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQ 283

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
             +  ++++       + ++      ++   C E K+D A ++L    K+    D   Y 
Sbjct: 284 RSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYS 343

Query: 260 TLITGYFRDEKANRALKLWDEM-----------------------------------KER 284
            LI GY +    ++AL L ++M                                   K+ 
Sbjct: 344 ELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDL 403

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           +I     +YN ++  L +  K +QA+ +L+E+    M  D   + T+I+G+C  G++  A
Sbjct: 404 RIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDA 463

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
            +   +M  K  +PD+VT NILL+   R G+  +ALK +     +    +++T+N +I  
Sbjct: 464 FRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEG 523

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI-N 463
           LC   ++ +A      ME+K +      Y A+ T   E+   E+A +    + E G + +
Sbjct: 524 LCIGGKVTEAEAFFCNMEDKSID----NYGAMITGYCEAKHTEKASELFFELSERGLLMD 579

Query: 464 HQVVQPNTSKTPEE-----------------IDPSSISYSEKINEHCSQGRYKDALQIFE 506
              +     K  EE                 ++PS   Y + I      G  ++A  +F+
Sbjct: 580 RGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFD 639

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
             R+ G+  +  TY  ++N +  R+  +S+A
Sbjct: 640 ILRKSGLTPDIFTYTTMIN-VCCRQNRLSEA 669



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 179/379 (47%), Gaps = 42/379 (11%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D V+YN ++DAL K  K+++   LL +MK + +  +   Y  L++GYC +G L +A RV 
Sbjct: 408 DEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVF 467

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN----- 123
           + M      PDV T+N+L+  +   G+  EA +L + M+S  L P+ +T+N +I      
Sbjct: 468 EEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIG 527

Query: 124 -------RFF-------------------ESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
                   FF                   E+  + +A +L  EL E G+  +      ++
Sbjct: 528 GKVTEAEAFFCNMEDKSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLL 587

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
           +  C+EG+ D+A  +++ M +    P    Y  +I A  +AG+M  A  + D++ + GL 
Sbjct: 588 EKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLT 647

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF----------- 266
            +  T  T+++  C + +L EA  L      RG   D V++  L+ G+            
Sbjct: 648 PDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARK 707

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R E    A  +W EM+  +I P    Y A+I G  +  + E AI + +E++  G+ PD  
Sbjct: 708 RKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRA 767

Query: 327 TFNTIIHGFCSEGQVEKAL 345
           T   ++ G  + G V+  L
Sbjct: 768 TCTALLSGCRNRGDVDMVL 786



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 13/225 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G L D      +L+ L ++G+ +    LL  M    + P++  Y  +++   + G ++ A
Sbjct: 575 GLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNA 634

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             V D++ ++   PD++TY  +IN  C    L EA  L ++M+   + PD+VT+  L++ 
Sbjct: 635 EAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDG 694

Query: 125 FFESGRSMEAF------------KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
             +   S EAF             +  E+    I+P+ + +  +I  +CK  +++ A  +
Sbjct: 695 HLKRVHS-EAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGL 753

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              M   G  PD  T   L+      G+++     ++++    +K
Sbjct: 754 YDEMMYRGVEPDRATCTALLSGCRNRGDVDMVLTKLNLINLTSVK 798


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 259/538 (48%), Gaps = 39/538 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LP  +  N+I+  L K  ++++   ++  M   G+ P+  TY++++ G CK   + +A
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            RV++ M +  + P+  TYN LI+G+  +GM  E+ R+ K+M S  ++P V   N+ I+ 
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN----- 179
            F+ GR+ EA  + D +   G KP+ ++++    W C          +V  M  N     
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYW-----YVTVVWVMWHNIFNLM 414

Query: 180 ---GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              G +P+   +N LI+A  + G M++A  + + M  KG+  +T+T  T++ +LC   +L
Sbjct: 415 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 474

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY-NA 295
           D+A    N     G    E  YG LI G     +  +A +L  EM  + I P    Y ++
Sbjct: 475 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 534

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + G+  +  D+++ ++Q+G  P+  TFN+++ G+C  G +E+A    + M    
Sbjct: 535 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
            +P+      L+ G C+ G ++ AL  FR  + KG    SV Y+ ++  L + RR   A 
Sbjct: 595 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 654

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA----QKFTSIMVETGKINHQVVQPNT 471
            +  EM E       +TY  +   L  +   +EA    +K  ++ V+   I   +V    
Sbjct: 655 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV---- 710

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                      IS   K+      GR ++A ++F+     G+  N  TY  ++  LIK
Sbjct: 711 -----------ISAMFKV------GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 751



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 235/464 (50%), Gaps = 8/464 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G +P     N+ + ALFK G+ NE + +   M  +G  P+  +Y+   S  C   W
Sbjct: 341 MSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY--W 398

Query: 61  LKEAMRVV-----DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
               + V+     +LM      P+   +N+LIN +   GM+++A  + ++M++  ++PD 
Sbjct: 399 YVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 458

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           VT+ T+I+     GR  +A    + + + G+ P+   +  +I+  C  G++ KA +++  
Sbjct: 459 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 518

Query: 176 MEENGFSPDCVTY-NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
           M      P  V Y +++I+  CK G + E   +MD+M + G + N +T N+++   C   
Sbjct: 519 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 578

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            ++EA+ LL++ +  G   +   YGTL+ GY ++ + + AL ++ +M  + + P++  Y+
Sbjct: 579 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 638

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ GL Q+ +T  A  M +E+++SG      T+  ++ G C     ++A     K+   
Sbjct: 639 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 698

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
           + K DI+T NI++S + + G  ++A + F +    G   +  TY+ +I++L KE   E+A
Sbjct: 699 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 758

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             L   +E+     D      I   L+    + +A  + SI+ E
Sbjct: 759 DNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 802



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 231/497 (46%), Gaps = 22/497 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P   TYNIL+  Y ++      + +V  + +N   PD ++Y+ LI G+   G +++A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
             EM    +LP ++  N++I    +     +A  ++ ++ + GI P+  T++++I   CK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
              +DKA +++  M E G  P+ +TYN+LI     +G   E+ R+   M   G+      
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT---LITGYFRDEKANRALKLWD 279
            N+ +H L    + +EA  + +S   +G   D +SY T    +  ++          +++
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFN 412

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M  + I P+   +N +I   ++ G  ++A+ +  ++   GMIPD  TF T+I   C  G
Sbjct: 413 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 472

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY- 398
           +++ AL   N MV+    P       L+ G C  G L KA +     + K      V Y 
Sbjct: 473 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 532

Query: 399 NTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           +++I++LCKE R+ +   ++  M +    P+  T+ ++       G +EEA      M  
Sbjct: 533 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 592

Query: 459 TGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
            G                 I+P+   Y   ++ +C  GR  DAL +F +   KG+     
Sbjct: 593 IG-----------------IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 635

Query: 519 TYMNLMNGLIKRRKSIS 535
            Y  +++GL + R++ +
Sbjct: 636 LYSIILHGLFQARRTTA 652



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 205/449 (45%), Gaps = 36/449 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+   +N +++A  + G +++   +  DM+ +G++P+  T+  ++S  C++G L +A
Sbjct: 418 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 477

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY-NTLIN 123
           +   + M      P    Y  LI G CN G L +A  L  EM +  + P  V Y +++IN
Sbjct: 478 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 537

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
              + GR  E   ++D + + G +PN VT N +++ YC  G +++A  ++  M   G  P
Sbjct: 538 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 597

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           +C  Y TL+D  CK G +++A  +   M  KG+K  ++  + ILH               
Sbjct: 598 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH--------------- 642

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                               G F+  +   A K++ EM E     S  TY  ++ GL ++
Sbjct: 643 --------------------GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 682

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
             T++A  +L +L    +  D  TFN +I      G+ ++A +  + +      P+I T 
Sbjct: 683 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 742

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +++++ L +E   E+A   F S    G A DS   N ++  L  +  +  A   LS + E
Sbjct: 743 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGE 802

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             L  +  T + + +     G+  E  K 
Sbjct: 803 NNLTLEASTISLLASLFSREGKYREHIKL 831



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 1/386 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD VT+ T++ +L + G+L++     + M   G+ P+   Y  L+ G C  G 
Sbjct: 449 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 508

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           L +A  ++ ++M ++   P V  ++ +IN  C  G + E   +   M      P+VVT+N
Sbjct: 509 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 568

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           +L+  +   G   EAF L+D +   GI+PN   +  ++  YCK G+ID A  + R+M   
Sbjct: 569 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 628

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P  V Y+ ++    +A     A +M   M   G  ++  T   +L  LC     DEA
Sbjct: 629 GVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 688

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
            MLL          D +++  +I+  F+  +   A +L+D +    ++P+  TY+ MI  
Sbjct: 689 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 748

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +    E+A ++   + +SG   D    N I+    ++ +V KA  + + + E +   +
Sbjct: 749 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLE 808

Query: 360 IVTCNILLSGLCREGILEKALKFFRS 385
             T ++L S   REG   + +K   +
Sbjct: 809 ASTISLLASLFSREGKYREHIKLLPA 834



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 30/280 (10%)

Query: 274 ALKLWDEMKE----RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           A++L+  M      R   P+  TYN +I    +  + +  + ++  LL++G+ PD+ ++ 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 214

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
           ++I+GF  +G+V+KA     +M+E+   P I+ CN ++  LC+   ++KA    +  +  
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G A D  TY+ +I  LCK + ++ A  +L +M E    P+  TY ++      SG   E+
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 450 QKFTSIMVETGKIN---------HQVVQPNTSKTPEEI---------DPSSISYSEKINE 491
            +    M   G I          H + +   +   + I          P  ISYS   + 
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASW 394

Query: 492 HCSQGRYKDAL-----QIFEETRQKGIAINKSTYMNLMNG 526
            C    Y   +      IF     KGIA NK  +  L+N 
Sbjct: 395 VCYW--YVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINA 432


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 234/445 (52%), Gaps = 4/445 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G + +  T+N ++ AL K  KL E   +   + K G+ PN  T+N++V G CK+G 
Sbjct: 229 MVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGD 288

Query: 61  LKEAMRVV---DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
           +  A+++V   ++M+     P+  TYN LI+G+C  G +  A  LR EM  + + P+V T
Sbjct: 289 MDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRT 348

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           Y T+I  +  +G   EA +L DE+ E G+ PN+V +N ++ W   EG +D A  +  +M 
Sbjct: 349 YATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMS 408

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           +     D  T + L    C+ G +  A + ++ +    L  +  + N +++ LC      
Sbjct: 409 DKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFA 468

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  LL     RG   D V++GTLI G+ ++     A++++D+M + +  P+   YN++I
Sbjct: 469 AARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSII 528

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL + G  + A  +++ L + G++ D  T+NT+I+G+ + G+ +KA +    M      
Sbjct: 529 NGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGIL 587

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
               T N ++  LC+ G +++A +     +L G   D++TY TL+ ++ K    E+   L
Sbjct: 588 ASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIEL 647

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVE 442
              M  K + PD+ TY  I + L++
Sbjct: 648 HDYMVLKGVVPDKLTYENIVSPLLQ 672



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 271/536 (50%), Gaps = 27/536 (5%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  ++  ++ ++ A  + G      +++  ++ +G       +N  +S   K+  +    
Sbjct: 164 CESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFW 223

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M     + +V T+N++++  C    L+EA  +   +    + P+VVT+N +++  
Sbjct: 224 IVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGA 283

Query: 126 FESGRSMEAFKLIDELD---EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
            + G    A KL+ +++      IKPN+VT+N +I  +CK G I  A ++   M +    
Sbjct: 284 CKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIE 343

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+  TY T+I+   +AG +EEA R+ D M  +GL  N++  N+I+H L  E  +D A ++
Sbjct: 344 PNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLV 403

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
               S +   LD+ +   L  G  R+     ALK  +++ E  ++   F++N +I  L +
Sbjct: 404 FTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCK 463

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           S     A  +L  +   G++PD  TF T+I G C EG +E A+Q ++KMV+   KP+++ 
Sbjct: 464 SNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLV 523

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N +++GLC++G+++ A +     + +   VD++TYNTLI+      + + AF L + M+
Sbjct: 524 YNSIINGLCKDGLVDVA-RSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQ 582

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              +     TY  +   L + G ++EA++  ++MV  G +                 P +
Sbjct: 583 NAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVL-----------------PDN 625

Query: 483 ISYSE---KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           I+Y      IN++CS    ++ +++ +    KG+  +K TY N+++ L++   + S
Sbjct: 626 ITYRTLVININKNCSA---EEVIELHDYMVLKGVVPDKLTYENIVSPLLQEESATS 678


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 238/462 (51%), Gaps = 8/462 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLN---EVRD-LLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           F C     ++N++L+ +  +G  +   E  D +++      + PN  ++N+++   CKLG
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLG 201

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           ++  A+ V   M + K LPD +TY  L++G C    ++EA  L  EM+S    P  V YN
Sbjct: 202 FVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI+   + G      KL+D +   G  PN VT+N +I   C +GK+DKA  ++  M  +
Sbjct: 262 VLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+ VTY TLI+   K     +  R++  M  +G ++N    + ++  L  E K +EA
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEA 381

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L    +++G   + V Y  +I G  R+ K N A ++ + M     +P+ +TY++++ G
Sbjct: 382 MTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKG 441

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             ++G +E+AI +  E+ ++G   +E  ++ +I G C  G+V++A+   +KM+    KPD
Sbjct: 442 FFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKA---VDSVTYNTLISSLCKERRLEDAFG 416
            V  + ++ GLC  G ++ ALK +   + + +     D VTYN L+  LC ++ +  A  
Sbjct: 502 TVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVD 561

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMV 457
           LL+ M ++   PD  T       L E S   EE + F   +V
Sbjct: 562 LLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELV 603



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 240/470 (51%), Gaps = 10/470 (2%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+  ++N++I   C  G ++ A  + + M   K LPD  TY TL++   +  R  EA  L
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL 244

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G  P+ V +N++I   CK+G + +  K+V NM   G  P+ VTYNTLI   C 
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCL 304

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A  +++ M       N +T  T+++ L  +++  +   LL S  +RGY L++  
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHI 364

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI+G F++ KA  A+ LW +M E+   P+   Y+A+I GL + GK  +A ++LN ++
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
            SG +P+  T+++++ GF   G  E+A+Q   +M E     +    ++L+ GLC  G ++
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM---EEKKLGPDRYTYA 434
           +A+  +   +  G   D+V Y+++I  LC    ++ A  L  EM   EE K  PD  TY 
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----SKTPEEIDPSSISYSEKI 489
            +   L     +  A    + M++ G  +  V+  NT     S+  +  +       E +
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRG-CDPDVITCNTFLNTLSEKSDSCEEGRSFLEELV 603

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
                + R   A +I E    K +A   ST+  ++  + K +K I+ A++
Sbjct: 604 ARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKK-INAAIN 652



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 237/502 (47%), Gaps = 26/502 (5%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           +T + ++  Y  LG      +++  +     +    ++ ++   +  A + E+A  L   
Sbjct: 78  STLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHR 137

Query: 106 M-ESLKLLPDVVTYNTLINRFFESG---RSMEAFK-LIDELDEHGIKPNAVTHNIMIKWY 160
           M +  +    V ++N+++N     G   R +E +  +++      I PN ++ N++IK  
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           CK G +D+A ++ R M E    PD  TY TL+D  CK   ++EA  ++D M  +G   + 
Sbjct: 198 CKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +  N ++  LC +  L     L+++   +G + +EV+Y TLI G     K ++A+ L + 
Sbjct: 258 VIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLER 317

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M   + +P+  TY  +I GL +  +      +L  + + G   ++  ++ +I G   EG+
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGK 377

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
            E+A+    KM EK  +P+IV  + ++ GLCREG   +A +     I  G   +  TY++
Sbjct: 378 AEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSS 437

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L+    K    E+A  +  EM+E     + + Y+ +   L   GR++EA    S M+  G
Sbjct: 438 LMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE---TRQKGIAINK 517
                            I P +++YS  I   C  G    AL+++ E     +     + 
Sbjct: 498 -----------------IKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540

Query: 518 STYMNLMNGLIKRRKSISKAVD 539
            TY  L++GL   +K +S+AVD
Sbjct: 541 VTYNILLDGLC-MQKDVSRAVD 561



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 24/225 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GCLP+  TY++++   FK G   E   +  +M + G   N   Y++L+ G C +G +KEA
Sbjct: 427 GCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEA 486

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM---ESLKLLPDVVTYNTL 121
           M V   M      PD   Y+ +I G C  G ++ A +L  EM   E  K  PDVVTYN L
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY------CKEGK---------- 165
           ++          A  L++ + + G  P+ +T N  +         C+EG+          
Sbjct: 547 LDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARL 606

Query: 166 -----IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                +  ACKIV  M     +P   T+  ++   CK   +  A 
Sbjct: 607 LKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAI 651


>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Brachypodium distachyon]
          Length = 460

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 213/412 (51%), Gaps = 4/412 (0%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N+ ++  C+ G L+ A  V+         PDV TYN L+   C A  L+  F + + M  
Sbjct: 14  NVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMRE 73

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + P+ VTYN+LI      G +M A  L DE+   GI P+A ++N+++    + G  + 
Sbjct: 74  AGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPED 133

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A ++  +M E G +P   TYNTL+D   KAG+   A+RM   + R GL +  +T NT+++
Sbjct: 134 AYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMIN 193

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   K+  A M+L    +  +  + V+Y T++   FR  + ++ L+ +  + E   +P
Sbjct: 194 GLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIP 253

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
             F Y  +I  L + G+ E+A      ++QSG   D   +NT+IH  C EG+++ A +  
Sbjct: 254 DVFPYCTVISALVKKGRVEEANAYSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELL 313

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           + M E   + D  T +IL++GLC+ G +E A K      ++    + V YN L+ +LCK 
Sbjct: 314 SMMEEGGLESDEYTFSILVNGLCKLGHIEAAEKQLCYMEMRDMESNVVAYNCLVDALCKS 373

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
            +++ A  LL +M+ K    D +TY ++   L   GR   A KF  I +  G
Sbjct: 374 DQVDAAIRLLHDMKLK----DDFTYTSLVHGLCRVGRYHMASKFLRICLREG 421



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 184/379 (48%), Gaps = 39/379 (10%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VTYNT+L A  +   L+    +L  M++ G+ PN  TYN L+    ++G    
Sbjct: 39  LGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMR 98

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ + D M +    PD W+YN+L++    +G  E+A+R+  +M    + P   TYNTL++
Sbjct: 99  ALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLD 158

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR--------- 174
             F++G +  A+++   L   G+    VT+N MI   C+ GK+  A  I+R         
Sbjct: 159 GLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTP 218

Query: 175 --------------------------NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
                                     ++ E G  PD   Y T+I A  K G +EEA    
Sbjct: 219 NAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYS 278

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
           ++M + G +++T   NT++H  C E KLD+A+ LL+   + G   DE ++  L+ G  + 
Sbjct: 279 ELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKL 338

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
                A K    M+ R +  +   YN ++  L +S + + AI +L+++     + D+ T+
Sbjct: 339 GHIEAAEKQLCYMEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDM----KLKDDFTY 394

Query: 329 NTIIHGFCSEGQVEKALQF 347
            +++HG C  G+   A +F
Sbjct: 395 TSLVHGLCRVGRYHMASKF 413



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 159/354 (44%), Gaps = 52/354 (14%)

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M R   +++T  +N  L  LC    L+ A  +L  A   G   D V+Y TL+  + R   
Sbjct: 1   MARARAQLSTRLMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAG 60

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            +    +   M+E  + P+  TYN++I   S+ G T +A+D+ +E+L++G+ PD  ++N 
Sbjct: 61  LDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNV 120

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           ++H     G  E A +    M EK   P   T N LL GL + G    A + FR     G
Sbjct: 121 LMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVG 180

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEME---------------------------- 422
             V  VTYNT+I+ LC+  ++  A  +L E+                             
Sbjct: 181 LPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGL 240

Query: 423 -------EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
                  E    PD + Y  + +ALV+ GR+EEA  ++ +M+++G               
Sbjct: 241 ETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYSELMIQSG--------------- 285

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             +D +   Y+  I+  C +G+  DA ++     + G+  ++ T+  L+NGL K
Sbjct: 286 SRLDTA--CYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCK 337



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 22/270 (8%)

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M   +   ST   N  +  L +SG  E+A  +L + +  GM PD  T+NT++   C    
Sbjct: 1   MARARAQLSTRLMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAG 60

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           ++       +M E    P+ VT N L+    R G+  +AL  F   +  G A D+ +YN 
Sbjct: 61  LDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNV 120

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF-------- 452
           L+  L +    EDA+ + ++M EK + P   TY  +   L ++G    A +         
Sbjct: 121 LMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVG 180

Query: 453 ---------TSI--MVETGKINH-QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
                    T I  +  +GK+ + +++     +T  E  P++++Y+  +      GR+  
Sbjct: 181 LPVGIVTYNTMINGLCRSGKVGYARMILRELGRT--EHTPNAVTYTTVMKCCFRYGRFDQ 238

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            L+ F    + G   +   Y  +++ L+K+
Sbjct: 239 GLETFLSLLEGGHIPDVFPYCTVISALVKK 268


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 230/439 (52%), Gaps = 2/439 (0%)

Query: 7   LPDNV-TYNTILDALFKKGKLNEVRDLLSDMKKQGLV-PNRTTYNILVSGYCKLGWLKEA 64
           +P NV T+NT+L  LF + K+ +   L   + ++ +  PN   Y  +++G  K G  ++ 
Sbjct: 128 IPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKT 187

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++ +M Q  + PDV TY+++I+  C    L+ A  L  EM+   + P++ TYN+LI+ 
Sbjct: 188 LSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDG 247

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  +   L+ E+    I PN  T +I+I   CKEGK++ A +++R+M E G  PD
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TY+ ++D  C  G ++ A R+ +V+  KG+K N  + + +++  C +K L +A  L  
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFG 367

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             S++G   D V+Y T++ G     +   A K++DEM      P    ++ +++G  + G
Sbjct: 368 EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYG 427

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+A+ + ++L ++    + + +  +I+G C   +V +A     K+      PD+ T N
Sbjct: 428 LVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYN 487

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           ++++G CREG+ ++     R     G   +++TYN ++    +  ++ +    + EM  +
Sbjct: 488 VMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGR 547

Query: 425 KLGPDRYTYAAIHTALVES 443
               D  T   +   L E+
Sbjct: 548 GFSFDATTTGVLINVLKEN 566



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 216/400 (54%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ V Y T+++ L K+G   +   LL  M++    P+  TY+I++   CK   L  A+
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +++ M Q    P+++TYN LI+G C  G  E+   L  EM +L + P+V T++ LI+  
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G+  +A +++  + E G++P+ +T++ ++  YC  G++D+A ++   + + G  P+ 
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            +Y+ LI+  CK  N+ +A ++   + +KGLK +T+T +TILH L    ++ +A  + + 
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDE 403

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G   D   + TL+ GYF+      A+ L+ +++  +   +   Y  +I GL ++ +
Sbjct: 404 MLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDR 463

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A  +  +L   G+IPD  T+N +I GFC EG  ++      KM +     + +T N+
Sbjct: 464 VREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNV 523

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           ++ G  R   + + + F +    +G + D+ T   LI+ L
Sbjct: 524 IMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 224/455 (49%), Gaps = 1/455 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           LP  + ++ +   +      + V  L  +M+  G+  + +  NI+ + YC    +  A  
Sbjct: 59  LPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFS 118

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLL-PDVVTYNTLINRF 125
           V+ +  +     +V T+N L+ G      + +A  L K++   K+  P+ V Y T++N  
Sbjct: 119 VLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGL 178

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G + +   L+  +++   KP+  T++I+I   CK+  +D A  ++  M++    P+ 
Sbjct: 179 SKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNI 238

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TYN+LID  CK G  E+   ++  M    +  N  T + ++  LC E K+++A  ++  
Sbjct: 239 FTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRH 298

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             ++G   D ++Y  ++ GY    + +RA ++++ ++++ I P+ F+Y+ +I G  +   
Sbjct: 299 MIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKN 358

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
             +A+ +  E+ Q G+ PD  T++TI+HG    G++  A +  ++M+     PDI   + 
Sbjct: 359 LAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHST 418

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           LL G  + G++E+A+  F       +  +   Y  +I+ LCK  R+ +A  +  ++    
Sbjct: 419 LLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIG 478

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           L PD  TY  + T     G  +E +     M + G
Sbjct: 479 LIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 206/424 (48%), Gaps = 1/424 (0%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGML 96
           K G+  N  T+N L+ G      + +A+ +   + + K   P+   Y  ++NG    G  
Sbjct: 125 KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHT 184

Query: 97  EEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIM 156
           E+   L + ME     PDV TY+ +I+   +      A  L++E+ +  I PN  T+N +
Sbjct: 185 EKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSL 244

Query: 157 IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGL 216
           I   CK G+ +K   ++  M     +P+  T++ LID  CK G +E+A  +M  M  KG+
Sbjct: 245 IDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGV 304

Query: 217 KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALK 276
           + + IT + I+   C   ++D A  + N    +G   +  SY  LI GY + +   +A++
Sbjct: 305 EPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQ 364

Query: 277 LWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC 336
           L+ E+ ++ + P T TY+ ++ GL + G+   A  + +E+L+ G  PD    +T++ G+ 
Sbjct: 365 LFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYF 424

Query: 337 SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSV 396
             G VE+A+   +K+       +I    ++++GLC+   + +A   F      G   D  
Sbjct: 425 KYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVR 484

Query: 397 TYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           TYN +I+  C+E   ++  G+L +ME+     +  TY  I      S ++ E   F   M
Sbjct: 485 TYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544

Query: 457 VETG 460
              G
Sbjct: 545 AGRG 548



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 212/453 (46%), Gaps = 19/453 (4%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L++A  L   M  +K LP V+ ++ L               L  E+   GI  +    NI
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +   YC   +ID A  ++    + G   + VT+NTL+        + +A  +   + R+ 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 216 L-KMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           + + N +   T+++ L      ++   LL    +     D  +Y  +I    +D   + A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           + L +EMK++ I P+ FTYN++I GL + G+ E+   +L+E++   + P+  TF+ +I G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C EG+VE A +    M+EK  +PDI+T + ++ G C  G +++A + F     KG   +
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
             +Y+ LI+  CK++ L  A  L  E+ +K L PD  TY+ I   L+E GR+ +A+K   
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 455 IMVETGKINHQVVQPNT-----------------SKTPEEIDPSSIS-YSEKINEHCSQG 496
            M+  G      +                     SK     + ++IS Y+  IN  C   
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           R ++A  IFE+    G+  +  TY  ++ G  +
Sbjct: 463 RVREAHAIFEKLPSIGLIPDVRTYNVMITGFCR 495


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 270/540 (50%), Gaps = 27/540 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+++T+  I+ +L + G  +    +L  M K         YN ++S   +LG ++EA
Sbjct: 233 GCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEA 292

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + + D M      PD+++YN ++ G C  G  E+A  L   M      PD VT+NT+I+ 
Sbjct: 293 LHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISY 349

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    A ++++++ ++G KP+  T++ ++    + G +D A +++R +    + P+
Sbjct: 350 LCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIP---WKPN 406

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V Y +++   C+A   ++  +++  M R  L ++ +T   I+  LC +  +D    +L 
Sbjct: 407 TVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLR 466

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             +K G   D + Y +LI G+  +   + AL+L+  M  ++   +  TYN M+ GL ++ 
Sbjct: 467 EMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVTYNYMLKGLCRAE 523

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E A  ++ E+++   +P+E TF+T+I   C +G VE A++   KM + +  P+++  +
Sbjct: 524 QWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYS 583

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            L++GL  +  ++ ALK       K    D++ Y+  +  LC+  R EDA  L+ EM  K
Sbjct: 584 TLINGLSDQECVDDALKLLNDMPCKP---DTICYSAALKGLCRAERWEDAGELILEMIRK 640

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE----------TGKINHQVVQPNTSKT 474
              PD  T++ +   L   G LE A + + +M++          +  IN    Q      
Sbjct: 641 NCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDA 700

Query: 475 PE-----EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +       +P +I YS  +   C   R++DA ++  E  +K   ++++T+  L+  L +
Sbjct: 701 LQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQ 760



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 264/528 (50%), Gaps = 31/528 (5%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD  +YNT++  L + G+  +   L++ M ++   P+  T+N ++S  C  G +  AM
Sbjct: 301 CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAM 360

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            VV+ M +    PD +TY+ L+N     G +++A  L   + ++   P+ V Y +++   
Sbjct: 361 EVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALEL---LRTIPWKPNTVCYRSVLKGL 417

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             + R  +  KL+ E+  + +  + VT  ++I   C++G +D   +++R M + G SPD 
Sbjct: 418 CRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDI 477

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           + YN+LI+   + G++++A  +   M     K N +T N +L  LC  ++ ++A  L+  
Sbjct: 478 IIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAE 534

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K     +EV++ TLI+   +      A++++++M +   MP+   Y+ +I GLS    
Sbjct: 535 MVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQEC 594

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ +LN++      PD   ++  + G C   + E A +   +M+ K+  PD VT +I
Sbjct: 595 VDDALKLLNDMPCK---PDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSI 651

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEMEEK 424
           L++ LC +G LE A +     +LK + + +V  Y++LI+   ++ R EDA  LL  M  +
Sbjct: 652 LINNLCHKGFLESATE-VSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCE 710

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              PD   Y+A    L  + R E+A++  + M                   ++      +
Sbjct: 711 ---PDTICYSAALKGLCRAKRWEDARELIAEMFR-----------------KQCPLDEAT 750

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +S  I   C  G    A ++FE+    G + N+  + +L+NG  ++R+
Sbjct: 751 FSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRR 798



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 228/456 (50%), Gaps = 12/456 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PDN TY+ +++AL ++G +++  +LL  +  +   PN   Y  ++ G C+   
Sbjct: 366 MPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADR 422

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +  ++V  M +N+   D  T+ ++I+  C  G+++    + +EM      PD++ YN+
Sbjct: 423 WDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNS 482

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN F E+G   +A +L   +     K N VT+N M+K  C+  + + A K+V  M ++ 
Sbjct: 483 LINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDE 539

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT++TLI   C+ G +E A  + + M +     N I  +T+++ L  ++ +D+A 
Sbjct: 540 CLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDAL 599

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN    +    D + Y   + G  R E+   A +L  EM  +  +P   T++ +I  L
Sbjct: 600 KLLNDMPCKP---DTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNL 656

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
              G  E A ++   +L+   +P+   ++++I+GF  + + E ALQ    M     +PD 
Sbjct: 657 CHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM---PCEPDT 713

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +  +  L GLCR    E A +       K   +D  T++ LI SLC+   ++ A  +  +
Sbjct: 714 ICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQ 773

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIM 456
           M      P+R  ++++     E  R++E  K  S M
Sbjct: 774 MSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/571 (24%), Positives = 265/571 (46%), Gaps = 59/571 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW-LKEAMR 66
           P  V    ++  L   G+L++   +L   ++ G   +  T N LV+GYC+ G  L +A R
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTA-DAVTRNTLVAGYCRAGGRLADAER 158

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           ++  +  + S  DV TYN L+ G+C  G L +A RL  +M      P+  T +TL+    
Sbjct: 159 MLASLALSGSA-DVVTYNTLVAGYCREGRLNDARRLVADM---PFAPNSYTNSTLLKGLC 214

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            +    +A +L+ E+   G  PN +T  ++I   C+ G  D+A  ++  M +   +   +
Sbjct: 215 SNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVI 274

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN +I    + G +EEA  + D M     K +  + NT++  LC + + ++A  L+   
Sbjct: 275 VYNEIISCLAELGRVEEALHLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGM 331

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            ++    DEV++ T+I+        + A+++ ++M +    P  FTY+A++  LS+ G  
Sbjct: 332 VRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCV 391

Query: 307 EQAIDMLN--------------------------------ELLQSGMIPDETTFNTIIHG 334
           + A+++L                                 E++++ +  DE TF  II  
Sbjct: 392 DDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDC 451

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
            C +G V+   +   +M +    PDI+  N L++G    G ++ AL+ F++   K     
Sbjct: 452 LCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRNV-- 509

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
            VTYN ++  LC+  + EDA  L++EM + +  P+  T++ + + L + G +E A +   
Sbjct: 510 -VTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFE 568

Query: 455 IMVETGKINHQVVQP---NTSKTPEEID------------PSSISYSEKINEHCSQGRYK 499
            M +   + + ++     N     E +D            P +I YS  +   C   R++
Sbjct: 569 KMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCRAERWE 628

Query: 500 DALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           DA ++  E  +K    ++ T+  L+N L  +
Sbjct: 629 DAGELILEMIRKNCLPDEVTFSILINNLCHK 659



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 187/385 (48%), Gaps = 29/385 (7%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN-MEEAF 205
           +P AV   ++IK  C  G++D A +++   E  G + D VT NTL+   C+AG  + +A 
Sbjct: 99  RPAAVPCTLLIKKLCAAGRLDDAERVLGASERAG-TADAVTRNTLVAGYCRAGGRLADAE 157

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           RM+  +   G   + +T NT++   C E +L++A  L+   +   +  +  +  TL+ G 
Sbjct: 158 RMLASLALSG-SADVVTYNTLVAGYCREGRLNDARRLV---ADMPFAPNSYTNSTLLKGL 213

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             +++ + A +L  EM      P+  T+  +I  L Q+G  ++A+ +L+++ +       
Sbjct: 214 CSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGV 273

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
             +N II      G+VE+AL   ++M     KPDI + N ++ GLCR+G  E A      
Sbjct: 274 IVYNEIISCLAELGRVEEALHLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAG 330

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            + K    D VT+NT+IS LC    ++ A  ++ +M +    PD +TY+A+  AL E G 
Sbjct: 331 MVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGC 390

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
           +++A +    +                       P+++ Y   +   C   R+ D  ++ 
Sbjct: 391 VDDALELLRTI--------------------PWKPNTVCYRSVLKGLCRADRWDDVGKLV 430

Query: 506 EETRQKGIAINKSTYMNLMNGLIKR 530
            E  +  + +++ T+  +++ L ++
Sbjct: 431 AEMIRNQLNLDEVTFGLIIDCLCQK 455


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 204/421 (48%), Gaps = 2/421 (0%)

Query: 10  NVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD 69
            ++YN +L+ L K G+ + V    +DM   G VPN  TY  L+   C+    +EA  V  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
            M      P+V++Y++LI G C    ++EA  L  EM      P+VVTY +L++   + G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           +  EA  L   +   G  P+ V +N++I  + K+G + +A ++   M E G  P   TYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
           +L+    + G       +   M R+G   N  T N +L   C    + EA+ L       
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D VSY TL+ G     K + A +L  EM    + P   +YN +I G S+SG  + A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
           I +  E+ +SG+ PD  +++TII   C  G+V  A      M+     PD      L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVT-YNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           LCR   L ++ + F++ + K + V  +  YN L+  LCK +R +D   +  E+ E+   P
Sbjct: 377 LCRGERLTESCELFQAMV-KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435

Query: 429 D 429
           D
Sbjct: 436 D 436



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 207/413 (50%), Gaps = 3/413 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GC+P+  TY  +L +L +  +  E R +   M  QG  PN  +Y+IL++G C+   
Sbjct: 43  MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA  +++ M      P+V TY  L++G C  G L+EA  L   M      PD V YN 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F + G   EA++L +E+ E G  P   T+N ++  + ++G+  +   + ++M   G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  T+N L+D  CK G+M EA R+   M   G   + ++ NT++  +C + K  EA 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL    + G   D VSY  LI GY +    + A+KL+ E+ +  + P  F+Y+ +I  L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++GK   A  +  +++ +G  PD      ++ G C   ++ ++ +    MV+    P I
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              N+L+  LC+    +   + F     +G + D      ++ +L   RR +D
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL---RRSDD 452



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 204/468 (43%), Gaps = 52/468 (11%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           +YN L+    K G         + M     +P+ +TY  L+   C A   EEA  + + M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
            +    P+V +Y+ LI       +  EA +L++E+ + G +PN VT+  ++   CK GK+
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
            +A  +   M   G  PD V YN LID   K G+M EA+R+ + M  KG      T    
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT---- 194

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
                                          Y +L++G+ R  +  R   L+ +M  +  
Sbjct: 195 -------------------------------YNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
           +P+ FT+N ++ G  + G   +A  +  E+   G  PD  ++NT++ G CS+G+  +A +
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQR 283

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
              +M+     PDIV+ NIL+ G  + G L+ A+K F      G   D+ +Y+T+I  LC
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           +  ++  AF +  +M      PD      +   L    RL E+ +    MV+        
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKF------- 396

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                     E  P    Y+  + + C   R  D  +IF E  ++G +
Sbjct: 397 ----------ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 181/379 (47%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+  +Y+ ++  L +  K++E  +LL++M   G  PN  TY  L+SG CK+G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LKEA+ +   M      PD   YN+LI+G+   G + EA+RL +EM     +P V TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F   G       L  ++   G  PN  T N ++  +CK G + +A ++   M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V+YNTL+   C  G   EA R++  M R G+  + ++ N ++        LD A 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L     K G   D  SY T+I    R  K   A  ++ +M      P       ++ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  +  ++ ++   +++   +P    +N +++  C   + +   +  +++ E+ F PD+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 361 VTCNILLSGLCREGILEKA 379
               ++L  L R    E A
Sbjct: 438 EISKVILETLRRSDDKEAA 456



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 181/381 (47%), Gaps = 17/381 (4%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
             +++N +++   K G+ D       +M   G  P+  TY  L+ + C+A   EEA  + 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M  +G   N  + + ++  LC  +K+DEA  LLN     G+  + V+YG+L++G  + 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            K   A+ L+  M  R   P    YN +I G S+ G   +A  +  E+L+ G IP   T+
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           N+++ GF  +G+  +       M+ +   P+I T N LL G C+ G + +A + F     
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G   D V+YNTL+  +C + +  +A  LL EM    +GPD  +Y  +     +SG L+ 
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A K    + ++G                 ++P + SYS  I+  C  G+   A  +F++ 
Sbjct: 316 AIKLFYEIPKSG-----------------LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
              G A + +  + L+ GL +
Sbjct: 359 IANGSAPDAAVVIPLVIGLCR 379



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 134/288 (46%), Gaps = 17/288 (5%)

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
           + S+  Y    +SY  L+    +  + +     +++M     +P+T+TY  ++  L Q+ 
Sbjct: 7   AGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQ 66

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           + E+A  +   +   G  P+  +++ +I G C   +V++A +  N+M++   +P++VT  
Sbjct: 67  RFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LLSGLC+ G L++A+  F   + +G   D V YN LI    K+  + +A+ L  EM EK
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              P  +TY ++ +     G     Q     M+  G +                 P+  +
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV-----------------PNIFT 229

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           ++  ++  C  G   +A ++F E R  G   +  +Y  LM G+  + K
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGK 277


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 247/526 (46%), Gaps = 17/526 (3%)

Query: 2    EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            E +G LP+    N +L  L ++ + ++ R L  +M  +    +  +  +LV G C    +
Sbjct: 1104 EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRV 1163

Query: 62   KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +E +++++       +P V  YN+LI+G+C  G +     L  EME+   LP +VTY +L
Sbjct: 1164 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSL 1223

Query: 122  INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
            IN   + G   +   L  E+ + G  PN   +N +I   CK     +A  I++ M  +G 
Sbjct: 1224 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGC 1283

Query: 182  SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             PD +T+NTLI   C  G++ +A   +    R+ L  N ++   ++H  C   +L  A  
Sbjct: 1284 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1343

Query: 242  LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            LL     RG+  D V++G LI G     K + AL + ++M ERQ+ P    YN +I GL 
Sbjct: 1344 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1403

Query: 302  QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            +      A ++L E+L+  + PDE  + T+I GF     +  A +    M  K   PDIV
Sbjct: 1404 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIV 1463

Query: 362  TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            +CN ++ G C+ G++ +A+    +    G   D  TY T+IS   K+  L  A   L +M
Sbjct: 1464 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1523

Query: 422  EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             ++K  P+  TY+++     ++G  + A+   + M                   E + P+
Sbjct: 1524 IKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANM-----------------QAEALSPN 1566

Query: 482  SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++Y+  I     + +   A   FE       + N  T   L+NGL
Sbjct: 1567 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 231/528 (43%), Gaps = 19/528 (3%)

Query: 26   LNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVD-LMTQNKSLPDVWTYN 84
             + V D L  M   G  P R     LV+ Y   G L +A ++ + +  Q  SLP+V   N
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116

Query: 85   MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
             L+         ++A +L  EM       D  +   L+       R  E  KLI+     
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1176

Query: 145  GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
            G  P+ V +N++I  YC+ G + +   ++  ME  GF P  VTY +LI+   K G++E+ 
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236

Query: 205  FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
              +   M ++G   N    N+++  LC  +   +A ++L      G   D +++ TLITG
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296

Query: 265  YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
               +    +A     E   R++ P+  +Y  +I G    G+   A D+L E++  G  PD
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356

Query: 325  ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              TF  +IHG    G+V +AL    KM E+   PD+   N+L+SGLC++ +L  A     
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416

Query: 385  SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
              + K    D   Y TLI    +   L DA  +   ME K + PD  +  A+     + G
Sbjct: 1417 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFG 1476

Query: 445  RLEEAQKFTSIMVETGKINHQVV----------QPNTSKT--------PEEIDPSSISYS 486
             + EA    S M + G I  +            Q N +            +  P+ ++YS
Sbjct: 1477 MMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1536

Query: 487  EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              IN +C  G    A  +F   + + ++ N  TY  L+  L K+ K +
Sbjct: 1537 SLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVL 1584



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 226/495 (45%), Gaps = 50/495 (10%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G LP  VTY ++++ L KKG L ++  L  +M+K+G  PN   YN ++   CK   
Sbjct: 1208 METKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRS 1267

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG-------MLEEAFR------------ 101
              +AM ++  M  +   PD+ T+N LI G C+ G        L EA R            
Sbjct: 1268 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 1327

Query: 102  ----------------LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                            L  EM      PDVVT+  LI+    +G+  EA  + +++ E  
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1387

Query: 146  IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
            + P+   +N++I   CK+  +  A  I+  M E    PD   Y TLID   ++ N+ +A 
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 1447

Query: 206  RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++ + M  KG+  + ++ N ++   C    + EA + +++  K G   DE +Y T+I+GY
Sbjct: 1448 KIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1507

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             +    N AL+   +M +R+  P+  TY+++I G  ++G T+ A  +   +    + P+ 
Sbjct: 1508 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNV 1567

Query: 326  TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL--CREGIL------- 376
             T+  +I     + +V +A  +   M+     P+ VT + L++GL  C   ++       
Sbjct: 1568 VTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNT 1627

Query: 377  ------EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
                  +  L  F+  +       +  YN +I SLC+   L +A    + M +K   P+ 
Sbjct: 1628 SEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNP 1687

Query: 431  YTYAAIHTALVESGR 445
             T+ ++       G+
Sbjct: 1688 ITFLSLLYGFCSVGK 1702



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 50/177 (28%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            C P+ VTY+++++   K G  +    L ++M+ + L PN  TY IL+    K   +  A 
Sbjct: 1528 CKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1587

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGW----------------------------------- 90
               + M  N   P+  T + L+NG                                    
Sbjct: 1588 LYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDI 1647

Query: 91   ---------------CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                           C   ML EA   +  M     +P+ +T+ +L+  F   G+S+
Sbjct: 1648 GDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSV 1704


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 212/380 (55%), Gaps = 3/380 (0%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAF-- 135
           PD++T+N++I+G+C  G L +A  + K + +  + P V TYNTLI+ + + G+  + +  
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245

Query: 136 -KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
             L+ E+ + GI P+ VT N++I  YCKE  I  A K+ + M + G   + VTYN+L+  
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG 305

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            C+ G +E++ ++++ M   GL     T+N++L+  C +  + EA   ++  ++RG   +
Sbjct: 306 LCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPN 365

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
            ++Y TL+ GY R  K   A    D M  + I P+  TYN +I G + S        +L+
Sbjct: 366 VITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLD 425

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           E+ + G+  D  T+N +I   C +G+V KA++  ++MVE   +P  V  N +++G C +G
Sbjct: 426 EMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKG 485

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
             + A +       + K  + VTYN  +   CK  ++++A  +L+EM EK L P+R TY 
Sbjct: 486 DAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYE 545

Query: 435 AIHTALVESGRLEEAQKFTS 454
            I++ ++E G + +   + +
Sbjct: 546 IINSGMIEKGYVPDISGYAA 565



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 193/363 (53%), Gaps = 19/363 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKG---KLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK 57
           +  +G  P   TYNT++D   K+G   K+  V  LL +M + G+ P+  T+N+L++GYCK
Sbjct: 214 ISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCK 273

Query: 58  LGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVT 117
              +  A++V   M Q     +V TYN L++G C  G +E++ +L +EME L L   + T
Sbjct: 274 EPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILST 333

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
            N+++N F + G  +EA   +D + + G+KPN +T+N ++  Y + GK+ +A      M 
Sbjct: 334 MNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMA 393

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
             G SP+  TYN LI     + +      ++D M  KG+K + +T N ++  LCC+ ++ 
Sbjct: 394 GKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVR 453

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           +A  LL+   + G     V+Y T+I G+     A  A ++   M++R+   +  TYN  +
Sbjct: 454 KAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFL 513

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
               + GK ++A  +LNE+L+ G++P+  T+  I  G                M+EK + 
Sbjct: 514 KYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG----------------MIEKGYV 557

Query: 358 PDI 360
           PDI
Sbjct: 558 PDI 560



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 218/458 (47%), Gaps = 26/458 (5%)

Query: 99  AFRLRKEMESLKLLP---DVVTYNTLINRFFESGRSMEAFK--LIDELDEHGIKPNAVTH 153
           A RL      L+ LP     +  + L+     + + + A++  L+   D    +P+A + 
Sbjct: 97  AGRLHSPASILRALPASSGPLVADMLVLALARASQPLAAYEAFLLAGADCPRYRPSAFSV 156

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N ++    +  ++D A +  R       SPD  T+N +I   CK G + +A  +   +  
Sbjct: 157 NALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDVAKNISA 216

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAY---MLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
            G+  +  T NT++   C   ++ + Y    LL    + G   D V++  LI GY ++  
Sbjct: 217 WGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPN 276

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A+K++ EM+++ I  +  TYN+++ GL + GK E +I ++ E+ + G+    +T N+
Sbjct: 277 ITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNS 336

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +++GFC +G + +A  + + + ++  KP+++T N L+ G  R G +++A     +   KG
Sbjct: 337 VLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKG 396

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            + +  TYN LI+     R      GLL EM+EK +  D  TY  +  AL   G + +A 
Sbjct: 397 ISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAV 456

Query: 451 KFTSIMVETG---------KINHQVVQPNTSKTPEEI---------DPSSISYSEKINEH 492
           K    MVE G          I +   +   ++   EI           + ++Y+  +   
Sbjct: 457 KLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYF 516

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           C  G+  +A  +  E  +KG+  N+ TY  + +G+I++
Sbjct: 517 CKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEK 554



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 158/325 (48%), Gaps = 29/325 (8%)

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
           EA++L  +   R Y     S   L+    R ++ + A + +     R++ P  FT+N +I
Sbjct: 137 EAFLLAGADCPR-YRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVI 195

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH-----NKMV 352
            G  ++G+  +A D+   +   G+ P   T+NT+I G+C  GQV K   +H      +M+
Sbjct: 196 SGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGK--MYHVDALLKEMI 253

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           +    PD+VT N+L++G C+E  +  A+K F+    +G   + VTYN+L+S LC+E ++E
Sbjct: 254 QAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVE 313

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT- 471
           D+  L+ EMEE  L     T  ++     + G + EA+ +   + + G +   V+  NT 
Sbjct: 314 DSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRG-MKPNVITYNTL 372

Query: 472 ------------------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                             +   + I P+  +Y+  I    +   ++    + +E ++KG+
Sbjct: 373 VDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGV 432

Query: 514 AINKSTYMNLMNGLIKRRKSISKAV 538
             +  TY N++ G +  +  + KAV
Sbjct: 433 KADVVTY-NVLIGALCCKGEVRKAV 456



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 16/191 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+  TYN ++           V  LL +MK++G+  +  TYN+L+   C  G +++A
Sbjct: 396 GISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKA 455

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++++D M +    P    YN +ING+C  G  + A  +R  ME  K   +VVTYN  +  
Sbjct: 456 VKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKY 515

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F + G+  EA  +++E+ E G+ PN +T+ I                I   M E G+ PD
Sbjct: 516 FCKMGKMDEANVVLNEMLEKGLVPNRITYEI----------------INSGMIEKGYVPD 559

Query: 185 CVTYNTLIDAN 195
              Y   +  N
Sbjct: 560 ISGYAADVSKN 570


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 247/498 (49%), Gaps = 29/498 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD++T+  ++ +  + G ++    +L  M K G  P    YN ++S + +LG +KEA+ +
Sbjct: 223 PDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHL 282

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M      PD+++YN ++ G C A   E+A  L  EM      PD VT+NT+I+    
Sbjct: 283 FSCMPCK---PDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCH 339

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    A +++D++ ++G KP+  T++ +I  + ++G ++ A +++R+M     SP+ V 
Sbjct: 340 KGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CSPNTVC 396

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y +++   C+ G  E+  +++  M R     + +    I+  LC    +D    +L    
Sbjct: 397 YKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVP 456

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G   D V Y +L+ G+    + + +LKL+  M  +   P+T TYN ++ GL +    E
Sbjct: 457 NYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCK---PNTVTYNYVLMGLCKVELWE 513

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  +++E++     P+E TF+ +I   C +G VE A+    KM      P+++  + L 
Sbjct: 514 DAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLN 573

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           +GL  +G ++ ALK   +   K    D++ Y++ +  LC+    EDA  L+ EM  K   
Sbjct: 574 NGLSEKGCVDNALKLLNNMSCKA---DTICYSSALKGLCRAELWEDAGELIVEMFRKDCP 630

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           PD  T++ I T L + G +E A + + +M++                  E  P+ + YS 
Sbjct: 631 PDEVTFSIIITNLCQQGFVEYATEVSDLMLKY-----------------ECTPNIVIYSS 673

Query: 488 KINEHCSQGRYKDALQIF 505
            IN     G  +DAL++ 
Sbjct: 674 LINGFSEHGHLEDALKLL 691



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 251/523 (47%), Gaps = 34/523 (6%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  V    ++  L   G+L +   +L    +     +   +N LV+GYC+ G L +A R+
Sbjct: 91  PAVVPCTLLIKKLCAAGRLADAEGVL----RASEAADAVDHNTLVAGYCRAGRLADAERM 146

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +  +  + +  DV TYN LI G+C  G LE+A   R  + S+   P+   YNTL+     
Sbjct: 147 LRSLAASGAA-DVVTYNTLIAGYCRGGRLEDA---RLLVASMPPAPNSYAYNTLLKGLCS 202

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + +  +A +L++E+  +   P+ +T  ++I  +C+ G +D+A  I+  M + G +P  + 
Sbjct: 203 AKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIV 262

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I    + G ++EA  +   M     K +  + N +L  LC  ++ ++A  L+    
Sbjct: 263 YNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEMV 319

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++    DEV++ T+I+        + AL++ D+M +    P  FTY+A+I   S+ G  E
Sbjct: 320 RKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVE 379

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+++L  +  S   P+   + +++ G C +GQ E   Q   +MV     PD +   +++
Sbjct: 380 DALELLRSMPCS---PNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLII 436

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
             LC+ G+++  L+  +     G + D V Y +L++   +  R++D+  L   M  K   
Sbjct: 437 DCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCK--- 493

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
           P+  TY  +   L +    E+A K    MV                  +E  P+ +++S 
Sbjct: 494 PNTVTYNYVLMGLCKVELWEDAGKLIDEMVG-----------------QECPPNEMTFSI 536

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            I+  C +G  + A+ +FE+ +  G   N   Y  L NGL ++
Sbjct: 537 LISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEK 579



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 236/487 (48%), Gaps = 37/487 (7%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P R   N  +  + +LG L  A+++V  M++    P V    +LI   C AG L +A  +
Sbjct: 59  PRRGAANDRLHHFIRLGDLDAALQLVGSMSEP---PAVVPCTLLIKKLCAAGRLADAEGV 115

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
            +  E+     D V +NTL+  +  +GR  +A +++  L   G   + VT+N +I  YC+
Sbjct: 116 LRASEAA----DAVDHNTLVAGYCRAGRLADAERMLRSLAASGAA-DVVTYNTLIAGYCR 170

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G+++ A  +V +M     +P+   YNTL+   C A    +A  +++ M R     + +T
Sbjct: 171 GGRLEDARLLVASMPP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLT 227

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
              ++H+ C    +D A  +L+  SK G     + Y  +I+ +    +   AL L+  M 
Sbjct: 228 FGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP 287

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            +   P  F+YNA++ GL ++ + E A +++ E+++    PDE TFNT+I   C +G V+
Sbjct: 288 CK---PDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVD 344

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
            AL+  ++M +   KPD  T + L++    +G +E AL+  RS      + ++V Y +++
Sbjct: 345 CALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPC---SPNTVCYKSVL 401

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
             LC++ + ED   L+ EM      PD   +  I   L + G           +V+ G  
Sbjct: 402 KGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRG-----------LVDCGLE 450

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
             Q V PN   +P+      + Y+  +N     GR  D+L++F+    K    N  TY  
Sbjct: 451 VLQEV-PNYGCSPD-----VVMYTSLLNGFAEYGRVDDSLKLFKSMTCKP---NTVTYNY 501

Query: 523 LMNGLIK 529
           ++ GL K
Sbjct: 502 VLMGLCK 508



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 218/469 (46%), Gaps = 53/469 (11%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD  +YN +L  L +  +  +  +L+++M ++   P+  T+N ++S  C  G +  A+
Sbjct: 288 CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCAL 347

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            VVD M +    PD +TY+ LIN +   G +E+A  L   + S+   P+ V Y +++   
Sbjct: 348 EVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALEL---LRSMPCSPNTVCYKSVLKGL 404

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G+  +  +LI E+  +   P+ +   ++I   C+ G +D   ++++ +   G SPD 
Sbjct: 405 CRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDV 464

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           V Y +L++   + G ++++ ++   M     K NT+T N +L  LC              
Sbjct: 465 VMYTSLLNGFAEYGRVDDSLKLFKSM---TCKPNTVTYNYVLMGLC-------------- 507

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                                + E    A KL DEM  ++  P+  T++ +I  L Q G 
Sbjct: 508 ---------------------KVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGL 546

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E AID+  ++   G  P+   ++T+ +G   +G V+ AL+  N M   S K D +  + 
Sbjct: 547 VECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNM---SCKADTICYSS 603

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            L GLCR  + E A +       K    D VT++ +I++LC++  +E A  +   M + +
Sbjct: 604 ALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYE 663

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             P+   Y+++     E G LE+A K          +     +P+TS T
Sbjct: 664 CTPNIVIYSSLINGFSEHGHLEDALKL---------LRSMPCEPDTSVT 703



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 59/106 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +    C  D + Y++ L  L +     +  +L+ +M ++   P+  T++I+++  C+ G+
Sbjct: 589 LNNMSCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGF 648

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           ++ A  V DLM + +  P++  Y+ LING+   G LE+A +L + M
Sbjct: 649 VEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM 694


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 221/414 (53%), Gaps = 1/414 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++  L ++G++ +   +L DM  +G  P+  TYNIL+   CK    ++AM +
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +DLM      P+  TYN+L++G C  G +++A  L + + S    P  V YNT++     
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +A +L+ E+      PN  T N++I   C++G + +A +++  M ++G + + VT
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I+  C+  N++ A  ++  M   G K + +T NT+L  LC   +  +A  L+++ +
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           + G   D V++ TLI    +      A++++ +M ++   P++ TY+ +I GL+++ K +
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           QA+++ NE+   G  PD+  +  +      +  +E+A+Q   K+ +    P  V  N +L
Sbjct: 305 QALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 363

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            GLCR G  E A+      +  G   D +TY  LI  L  E  L +A  LL ++
Sbjct: 364 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 205/410 (50%), Gaps = 1/410 (0%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           PN  TYN L+   C+ G +++A+ V+D M      PDV TYN+L+   C      +A  L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
              M +    P+ VTYN L++     G   +A +L+  L  HG KP+ V +N ++K  C 
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
             +   A ++V  M      P+  T+N +I + C+ G +++A ++++ M + G   N +T
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            N I++ LC ++ +D A  LL+     G   D V+Y TL+ G     +   A +L D M 
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           +   +P   T+N +I  L Q G    AI++  ++   G  P+  T++TII G     +++
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL+  N+M  K F PD +   +L   L  +  +E+A++  R     G +  +V YN ++
Sbjct: 305 QALELFNEMGHKGFNPDKIY-QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 363

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
             LC+  + E A  +++ M      PD  TY  +   L   G L EA++ 
Sbjct: 364 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAREL 413



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 196/383 (51%), Gaps = 1/383 (0%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+ +TYN LI+  C  G + +A  +  +M      PDVVTYN L+    +     +A +L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           ID +   G  PN VT+N+++   C EG +D A +++RN+  +G  P  V YNT++   C 
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
           A    +A  ++  M R+    N  T N ++++LC +  L +A  LL   SK G   + V+
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  +I G       + A+ L  +MK     P   TYN ++ GL  + +   A ++++ + 
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           Q+G +PD  TFNT+I   C +G +  A++   +M +K   P+ +T + ++SGL +   L+
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +AL+ F     KG   D + Y  L   L  +  +E+A   + ++++  + P    Y AI 
Sbjct: 305 QALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 363

Query: 438 TALVESGRLEEAQKFTSIMVETG 460
             L  +G+ E A    + MV +G
Sbjct: 364 LGLCRNGKTEFAIDIMAYMVSSG 386



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 192/354 (54%), Gaps = 1/354 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC P+NVTYN ++D +  +G +++  +LL ++   G  P+   YN ++ G C    
Sbjct: 68  MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAER 127

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +V  M +    P+  T+N++I   C  G+L++A +L ++M       ++VTYN 
Sbjct: 128 WGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 187

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   E      A  L+ ++  +G KP+ VT+N ++K  C   +   A +++ NM +NG
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNG 247

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VT+NTLI   C+ G M +A  +   M  KG   N+IT +TI+  L    KLD+A 
Sbjct: 248 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 307

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N    +G+  D++ Y  L      D+    A++   ++++  I P T  YNA++ GL
Sbjct: 308 ELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 366

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++GKTE AID++  ++ SG +PD+ T+  +I G   EG + +A +   K+  +
Sbjct: 367 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 420



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTYN +L+A  K     +  +L+  M+ +G  PN  TYN+L+ G C  G + +A
Sbjct: 37  GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++  +  +   P    YN ++ G C+A    +A  L  EM      P+  T+N +I  
Sbjct: 97  LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G   +A +L++++ +HG   N VT+N +I   C++  +D A  ++  M+  G  PD
Sbjct: 157 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYNTL+   C A    +A  +MD M + G   + +T NT++  LC +  + +A  +  
Sbjct: 217 IVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK 276

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
               +G   + ++Y T+I+G  +  K ++AL+L++EM  +   P    Y  +   L+   
Sbjct: 277 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDD 335

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
             E+AI  + +L  SG+ P    +N I+ G C  G+ E A+     MV     PD +T  
Sbjct: 336 TIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYV 395

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           IL+ GL  EG L +A    R  ++K  + D V  N+LI S
Sbjct: 396 ILIEGLAYEGYLNEA----RELLIKLCSRD-VLVNSLIKS 430



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 198/399 (49%), Gaps = 17/399 (4%)

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           ++PNA T+N +I   C+ G++  A  ++ +M   G +PD VTYN L++A CK     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++D+M  +G   N +T N ++  +C E  +D+A  LL +    G     V+Y T++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
              E+   A +L  EM      P+  T+N +I+ L + G  +QAI +L ++ + G   + 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+N II+G C +  V+ A+   +KM     KPDIVT N LL GLC       A +   +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
               G   D+VT+NTLI  LC++  + DA  +  +M +K   P+  TY+ I + L ++ +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 446 LEEAQKFTSIMVETGKINHQVVQ-----PNTSKTPEE------------IDPSSISYSEK 488
           L++A +  + M   G    ++ Q      N   T EE            I P ++ Y+  
Sbjct: 303 LDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +   C  G+ + A+ I       G   +  TY+ L+ GL
Sbjct: 363 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 401



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 159/317 (50%), Gaps = 17/317 (5%)

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           ++ N  T N ++HTLC   ++ +A  +L+    RG   D V+Y  L+    +     +A+
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L D M+     P+  TYN ++ G+   G  + A+++L  L   G  P    +NT++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           CS  +   A +   +M+ ++  P+  T N+++  LCR+G+L++A++        G   + 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VTYN +I+ LC++R ++ A GLLS+M+     PD  TY  +   L  + R  +A++    
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M + G +                 P +++++  I   C +G   DA+++F++   KG   
Sbjct: 243 MTQNGCL-----------------PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTP 285

Query: 516 NKSTYMNLMNGLIKRRK 532
           N  TY  +++GL K  K
Sbjct: 286 NSITYSTIISGLAKATK 302


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 216/410 (52%), Gaps = 8/410 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V YNT++ AL K GK+   R L+++M +    P+  T+N+L+S YC+   
Sbjct: 259 MKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEEN 314

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +++       +PDV T   ++   C AG + E   + + +ES+  + DVV YNT
Sbjct: 315 LVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNT 374

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G++    +++ +++  G  PN  T+NI+   YC  G +D A  +  +M+ +G
Sbjct: 375 LIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDG 434

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDE 238
            + + +TY+TLI   C  G ME+ F+++++M   R G        N+I++ L  + + +E
Sbjct: 435 INWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEE 494

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   L    K   +   V     I G+  +     A +++D+M +   +PS   Y  +I 
Sbjct: 495 ALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIH 552

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  Q G   +A +++NE++  G  P   TFN +I  FC +G+V  AL+    MV +   P
Sbjct: 553 GFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLP 612

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           D+ + + ++  LC +G  +KA++ F   + K    D  T+N+++  L +E
Sbjct: 613 DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 662



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 226/459 (49%), Gaps = 8/459 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D+ T+  ++  L    ++ +   LL  MK +G  PN   YN ++   CK G +  A
Sbjct: 228 GVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRA 287

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M +    P   T+N+LI+ +C    L +A  L ++  S+  +PDVVT   ++  
Sbjct: 288 RSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGI 343

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR  E  ++++ ++  G   + V +N +IK +C  GK     +++++ME  G  P+
Sbjct: 344 LCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPN 403

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN L    C +G ++ A  + + M   G+  N +T +T++  LC   ++++ + +L 
Sbjct: 404 VDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILE 463

Query: 245 SASK-RGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              + RG     +S Y ++I G ++  +   AL+   +M+  ++ P     +  I G   
Sbjct: 464 LMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME--KLFPRAVDRSLRILGFCN 521

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G    A  + +++++ G +P    +  +IHGFC +G V +A +  N+MV+  + P   T
Sbjct: 522 EGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPT 581

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+S  C +G +  ALK     + +G   D  +Y+ ++ +LC +   + A  L  +M 
Sbjct: 582 FNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMV 641

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           EK + PD  T+ ++   L +     E      + ++ GK
Sbjct: 642 EKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDGK 680



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 259/551 (47%), Gaps = 61/551 (11%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           TY  ++  L    +   V+++L +M    G  P+ + +  +V G  +   +++ ++V+DL
Sbjct: 129 TYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDL 188

Query: 71  MT---QNKSLP--------------------------------DVWTYNMLINGWCNAGM 95
           +T   +N SL                                 D +T+ +L+ G C    
Sbjct: 189 ITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNR 248

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           + +AF+L + M+S    P+ V YNT+I+   ++G+   A  L++E+    ++P+ VT N+
Sbjct: 249 IGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNV 304

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I  YC+E  + +A  ++      GF PD VT   ++   CKAG + E   +++ +   G
Sbjct: 305 LISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMG 364

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
             ++ +  NT++   C   K    + +L     +G   +  +Y  L +GY      + A+
Sbjct: 365 GVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAI 424

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS--GMIPDETTFNTIIH 333
            L+++MK   I  +  TY+ +I GL   G+ E    +L  + +S  G     + +N+II+
Sbjct: 425 DLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIY 484

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           G   + Q E+AL+F  KM EK F P  V  ++ + G C EG +  A + +   I +G   
Sbjct: 485 GLYKKNQFEEALEFLTKM-EKLF-PRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVP 542

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
             + Y  LI   C++  + +AF L++EM +    P   T+ A+ +A    G++  A K  
Sbjct: 543 SVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLM 602

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             MV  G +                 P   SYS  ++  C++G ++ A+++F +  +K I
Sbjct: 603 EDMVGRGCL-----------------PDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDI 645

Query: 514 AINKSTYMNLM 524
             + ST+ +++
Sbjct: 646 LPDYSTWNSML 656



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 211/450 (46%), Gaps = 28/450 (6%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           TY  LI+  C+    E    +  EM  S+   PD   + T++     +    +  K++D 
Sbjct: 129 TYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDL 188

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN-MEENGFSPDCVTYNTLIDANCKAG 199
           + + G  P+    N ++    KE  ID A +  R  M  NG S D  T+  L+   C   
Sbjct: 189 ITKFGENPSLKIFNSILDVLVKE-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTN 247

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            + +AF+++ VM  +G   NT+  NT++H LC   K+  A  L+N   +      +V++ 
Sbjct: 248 RIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEP----SDVTFN 303

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI+ Y ++E   +AL L ++      +P   T   ++  L ++G+  + +++L  +   
Sbjct: 304 VLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESM 363

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G + D   +NT+I GFC  G+ +   +    M  K   P++ T NIL SG C  G+L+ A
Sbjct: 364 GGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSA 423

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT--YAAIH 437
           +  F      G   + +TY+TLI  LC   R+ED F +L  MEE + G       Y +I 
Sbjct: 424 IDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSII 483

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L +  + EEA +F + M                   E++ P ++  S +I   C++G 
Sbjct: 484 YGLYKKNQFEEALEFLTKM-------------------EKLFPRAVDRSLRILGFCNEGS 524

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             DA +++++  ++G   +   Y+ L++G 
Sbjct: 525 IGDAKRVYDQMIKEGGVPSVLVYVCLIHGF 554



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 35/287 (12%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GCLP+  TYN +       G L+   DL +DMK  G+  N  TY+ L+ G C  G 
Sbjct: 395 MEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGR 454

Query: 61  LKEAMRVVDLMTQNKS-----------------------------------LPDVWTYNM 85
           +++  ++++LM +++                                     P     ++
Sbjct: 455 MEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSL 514

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
            I G+CN G + +A R+  +M     +P V+ Y  LI+ F + G   EAF+LI+E+ +HG
Sbjct: 515 RILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHG 574

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
             P A T N +I  +C +GK+  A K++ +M   G  PD  +Y+ ++DA C  G+ ++A 
Sbjct: 575 YFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAV 634

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           R+   M  K +  +  T N++L  L  E    E   L +   + G Y
Sbjct: 635 RLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDGKY 681



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 25/250 (10%)

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           TY A+I  L    + E   ++L+E+  S G  PDE+ F TI+ G      V + ++  + 
Sbjct: 129 TYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDL 188

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS-WILKGKAVDSVTYNTLISSLCKER 409
           + +    P +   N +L  L +E I + A +F+R   ++ G + D  T+  L+  LC   
Sbjct: 189 ITKFGENPSLKIFNSILDVLVKEDI-DLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTN 247

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R+ DAF LL  M+ +   P+   Y  +  AL ++G++  A+   + MVE           
Sbjct: 248 RIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----------- 296

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                     PS ++++  I+ +C +     AL + E++   G   +  T   ++ G++ 
Sbjct: 297 ----------PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVV-GILC 345

Query: 530 RRKSISKAVD 539
           +   +++ V+
Sbjct: 346 KAGRVTEGVE 355


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 211/410 (51%), Gaps = 8/410 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V YNT+L AL K GK+   R L+ ++++    PN  T+N+L++ YCK   
Sbjct: 204 MKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----PNDVTFNVLIAAYCKEEN 259

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +++       +PDV T   ++   CNAG + EA  + + +E    L DVV YNT
Sbjct: 260 LVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNT 319

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F   G+   A + + E++  G  PN  T+NI+I  +C  G  D A  +  +M+ +G
Sbjct: 320 LLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDG 379

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDE 238
            S +  TY+TLI      G +EE  +++++M   + G        N++L+ L  +   DE
Sbjct: 380 ISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDE 439

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   L    K   +   V     I G+        A  ++D+M      P+   Y+ ++ 
Sbjct: 440 ALEFLMKMEK--LFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVH 497

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  Q G   +A +++NE++  G     + FN +IHGFC +G+ E AL+  + MV +   P
Sbjct: 498 GFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVP 557

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           D  T + L+  LCR+G  +KAL  F   I KG   DS T+N+L+  L KE
Sbjct: 558 DRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKE 607



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 217/438 (49%), Gaps = 8/438 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G   D+ T+  ++  L    ++ +   LL  MK +G+ PN   YN L+   CK G 
Sbjct: 169 MMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGK 228

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A  ++D + +    P+  T+N+LI  +C    L +A  L ++  SL  +PDVVT   
Sbjct: 229 VGRARSLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTK 284

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     +GR  EA ++++ ++  G   + V +N +++ +C+ GKI  A + ++ ME  G
Sbjct: 285 VVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKG 344

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+  TYN LI   C +G  + A  M + M   G+  N  T +T++  L    +++E  
Sbjct: 345 CLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGL 404

Query: 241 MLLN--SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
            +L     SK G       Y +++ G ++    + AL+    MK  ++ P     +  I 
Sbjct: 405 KILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFL--MKMEKLFPRAVDRSLRIL 462

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  + G  + A  + ++++  G  P+   ++ ++HGFC EG + +A +  N+MV   +  
Sbjct: 463 GFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFL 522

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
                N L+ G C +G  E ALK     + +G   D  TY+ LI +LC++   + A  + 
Sbjct: 523 VASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIF 582

Query: 419 SEMEEKKLGPDRYTYAAI 436
           ++M EK + PD  T+ ++
Sbjct: 583 NQMIEKGITPDSSTWNSL 600



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 258/531 (48%), Gaps = 37/531 (6%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK--LG 59
              G  PD   + T++  L +   +  V  +L  + K G  P+   +N ++    K  + 
Sbjct: 100 HAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDID 159

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
             +E  R    M  +    D +T+ +L+ G C    + + FRL + M+S  + P+ V YN
Sbjct: 160 VAREFYR--KQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYN 217

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           TL++   ++G+   A  L+DE++E    PN VT N++I  YCKE  + +A  ++      
Sbjct: 218 TLLHALCKNGKVGRARSLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSL 273

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           GF PD VT   +++  C AG + EA  M++ +  KG  ++ +  NT+L   C   K+  A
Sbjct: 274 GFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVA 333

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           +  L    ++G   +  +Y  LI+G+      + AL ++++MK   I  +  TY+ +I G
Sbjct: 334 HRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKG 393

Query: 300 LSQSGKTEQAIDMLNELLQS--GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
           L   G+ E+ + +L  + +S  G     + +N++++G   +   ++AL+F  KM EK F 
Sbjct: 394 LFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKM-EKLF- 451

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           P  V  ++ + G C +G ++ A   F   I +G   + + Y+ L+   C+E  L +AF L
Sbjct: 452 PRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFEL 511

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVES----GRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           ++EM    +G   +  A+   AL+      G+ E A K    MV  G +           
Sbjct: 512 MNEM----VGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCV----------- 556

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
                 P   +YS  I+  C +G ++ AL IF +  +KGI  + ST+ +L+
Sbjct: 557 ------PDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 205/450 (45%), Gaps = 28/450 (6%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
           TY  LI   C     +  ++L  EM  ++   PD   + T+I     +       K++D 
Sbjct: 74  TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDL 133

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR-NMEENGFSPDCVTYNTLIDANCKAG 199
           + + G  P+    N ++    K   ID A +  R  M  +G   D  T+  L+   C   
Sbjct: 134 ISKFGKNPSLKIFNSILDVLVKV-DIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTN 192

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            + + FR++ VM  +G+K N +  NT+LH LC   K+  A  L++   +     ++V++ 
Sbjct: 193 RIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEEP----NDVTFN 248

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            LI  Y ++E   +AL L ++      +P   T   ++  L  +G+  +A++ML  +   
Sbjct: 249 VLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYK 308

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G + D   +NT++ GFC  G+++ A +F  +M  K   P++ T NIL+SG C  G+ + A
Sbjct: 309 GGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMA 368

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT--YAAIH 437
           L  F      G + +  TY+TLI  L    R+E+   +L  MEE K G       Y ++ 
Sbjct: 369 LDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVL 428

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
             L +    +EA +F   M                   E++ P ++  S +I   C +G 
Sbjct: 429 YGLYKKNMWDEALEFLMKM-------------------EKLFPRAVDRSLRILGFCEKGA 469

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            K+A  +F++   +G   N   Y  L++G 
Sbjct: 470 VKNAKMVFDQMINEGGTPNILVYDCLVHGF 499


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 252/531 (47%), Gaps = 20/531 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G LPD    N +L  L ++ +    R L  +M  ++G   + +T  ++V G C  G ++E
Sbjct: 41  GALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTC-VMVRGLCLEGRVEE 99

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
              +++       +P    YN+LI+G+C  G +     L  EME+  ++P VVTY  +I+
Sbjct: 100 GRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIH 159

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
                G   +   L+ E+   G+ PN   +N +I   CK     +A  ++  M ++ F+P
Sbjct: 160 WLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNP 219

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D VT+NT+I   C+ G++ EA +++    R+GL+ N ++   ++H  C   +   A  LL
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLL 279

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                RG+  D ++ G LI G     + N AL + ++M ERQ+MP    YN +I GL + 
Sbjct: 280 VEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKK 339

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
                A ++L E+L+  + PD+  + T+I GF    ++  A +    M EK+  PDIV  
Sbjct: 340 RMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAY 398

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N+++ G C+ G++++A+    S    G   D  TY TL+    K+  +  +  LL +M +
Sbjct: 399 NVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMK 458

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           ++  P+ +TYA++       G    A+   + M   G                 + P+ +
Sbjct: 459 RRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEG-----------------LFPNVV 501

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
            Y+  I     + +   A   FE         N +T   L+NGL+  R  +
Sbjct: 502 HYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGM 552



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 242/542 (44%), Gaps = 37/542 (6%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           G GC+P  V YN ++D   ++G +     LL +M+ +G++P   TY  ++    + G L 
Sbjct: 109 GEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLT 168

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +   ++  M      P+V  YN +IN  C      +A  +  +M   +  PDVVT+NT+I
Sbjct: 169 KVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMI 228

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
             F   G   EA KL+ E    G++PN +++  +I  +C  G+   A  ++  M   G +
Sbjct: 229 AGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHT 288

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD +T   LI     +G + +A  + + M  + +  +    N ++  LC ++ L  A  L
Sbjct: 289 PDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 348

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L    ++    D+  Y TLI G+ R +K + A K+++ M+E+   P    YN MI G  +
Sbjct: 349 LEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCK 407

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G  ++A+  ++ + ++G IPDE T+ T++ G+  +G +  +L+    M+++  KP+I T
Sbjct: 408 FGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFT 467

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ G C  G    A   F     +G   + V Y  LI SL K+ ++  A      M 
Sbjct: 468 YASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHML 527

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE----- 477
                P+  T   +   LV                      H +V  N S T +      
Sbjct: 528 LNHCPPNDATVHYLVNGLVNC-------------------RHGMVNSNRSDTKQAHEKSA 568

Query: 478 ------------IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       +DP   +Y+  I   C       A+ + ++   KG   +  T+++L+ 
Sbjct: 569 LLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLY 628

Query: 526 GL 527
           G 
Sbjct: 629 GF 630



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 225/494 (45%), Gaps = 51/494 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G +P  VTY  I+  L +KG L +V  LL +M+ +GL PN   YN +++  CK   
Sbjct: 142 METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRS 201

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  +++ M +++  PDV T+N +I G+C  G + EA +L +E     L P+ ++Y  
Sbjct: 202 ASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTP 261

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVT---------------------------- 152
           LI+ F   G +M A  L+ E+   G  P+ +T                            
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 153 -------HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
                  +N++I   CK+  +  A  ++  M E    PD   Y TLID   ++  + +A 
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
           ++ + M  K    + +  N ++   C    + EA   ++S  K G   DE +Y TL+ GY
Sbjct: 382 KIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGY 440

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            +    + +L+L  +M +R+  P+ FTY ++I G    G T  A D+  ++   G+ P+ 
Sbjct: 441 AKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNV 500

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL--CREGIL------- 376
             +  +I     + +V +A  +   M+     P+  T + L++GL  CR G++       
Sbjct: 501 VHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDT 560

Query: 377 ----EKA--LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
               EK+  L  FR  I  G       YN +I SLC+   L  A  L  +M  K   PD 
Sbjct: 561 KQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDP 620

Query: 431 YTYAAIHTALVESG 444
            T+ ++      +G
Sbjct: 621 ITFLSLLYGFSSAG 634



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 172/389 (44%), Gaps = 51/389 (13%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P+ ++Y  ++     +G+     DLL +M  +G  P+  T   L+ G    G + +A
Sbjct: 251 GLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDA 310

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V + M + + +PD   YN+LI+G C   ML  A  L +EM   K+ PD   Y TLI+ 
Sbjct: 311 LIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDG 370

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  S +  +A K+ + ++E    P+ V +N+MIK YCK G + +A   + +M + G  PD
Sbjct: 371 FVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPD 429

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TL+D   K G++  + R++  M ++  K N  T  +++   C       A  L  
Sbjct: 430 EFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFA 489

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT------------ 292
                G + + V Y  LI   F+ +K  +A   ++ M      P+  T            
Sbjct: 490 KMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCR 549

Query: 293 --------------------------------------YNAMIWGLSQSGKTEQAIDMLN 314
                                                 YNA+I+ L +     +A+D+ +
Sbjct: 550 HGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKD 609

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           ++   G +PD  TF ++++GF S G+  K
Sbjct: 610 KMSNKGCLPDPITFLSLLYGFSSAGESGK 638


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 240/518 (46%), Gaps = 22/518 (4%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  P    YN ++DAL K   ++        M     V +R TYN L+ G CK+G + E
Sbjct: 173 LGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDE 232

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+R+V  M      P+V+TY MLI G+C A  ++EAF + + M+   + P+  T   L++
Sbjct: 233 ALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVH 292

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK--WYCKEGKIDKACKIV---RNMEE 178
             F      +A +L+ E  +   +   V   +      YC          +V   R +  
Sbjct: 293 GVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGR 352

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G+ P    +N ++    K   + E   + +++ ++G+K        ++  L   +  +E
Sbjct: 353 GGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREE 412

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
              +       G   +  SY  +I  + R +  + A + + +M+ R ++P+  T+N +I 
Sbjct: 413 GDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLIN 472

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  + G  ++A  +L  LL++G+ PD  TF++I+ G C   + E+AL+   +M+E    P
Sbjct: 473 GHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINP 532

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           + V  NIL+  LC  G + +++K  R    +G + D+ +YN LI   C+  ++E A  L 
Sbjct: 533 NAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLF 592

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             M    L PD YTY+A   AL ESGRLEEA+K    M   G                  
Sbjct: 593 DSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANG-----------------C 635

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAIN 516
            P S   +  I     Q   ++A  I E  RQKGI++N
Sbjct: 636 SPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLN 673



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 139/252 (55%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G + +  +YN I++   +   ++   +   DM+ +G+VPN  T+N L++G+CK G + +A
Sbjct: 424 GLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKA 483

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++ + +N   PD++T++ +++G C     EEA     EM    + P+ V YN LI  
Sbjct: 484 RKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRS 543

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
               G    + KL+  + + GI P+  ++N +I+ +C+  K++KA K+  +M  +G +PD
Sbjct: 544 LCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPD 603

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+  I+A  ++G +EEA +M   M   G   ++   N I+  L  ++ ++EA  ++ 
Sbjct: 604 NYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIE 663

Query: 245 SASKRGYYLDEV 256
              ++G  L+ +
Sbjct: 664 RCRQKGISLNSI 675



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 190/436 (43%), Gaps = 40/436 (9%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+  TY  +++      +++E   +   MK  G+ PN  T   LV G  +   
Sbjct: 240 MKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVD 299

Query: 61  LKEAMRVVD----------------------------------------LMTQNKSLPDV 80
             +A+ ++                                         ++ +    P  
Sbjct: 300 PSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGN 359

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
             +N+++        L E   + + +    +   +  Y  LI   +++    E  ++  +
Sbjct: 360 SVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQ 419

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           L   G+  N  ++N++I  +C+   +D A +  R+M+  G  P+ VT+NTLI+ +CK G 
Sbjct: 420 LISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGA 479

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           +++A ++++ +   GLK +  T ++I+  LC  K+ +EA        + G   + V Y  
Sbjct: 480 IDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNI 539

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           LI          R++KL   M++  I P T++YNA+I    +  K E+A  + + + +SG
Sbjct: 540 LIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSG 599

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           + PD  T++  I      G++E+A +    M      PD   CN+++  L ++  +E+A 
Sbjct: 600 LNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQ 659

Query: 381 KFFRSWILKGKAVDSV 396
                   KG +++S+
Sbjct: 660 NIIERCRQKGISLNSI 675



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/342 (19%), Positives = 151/342 (44%), Gaps = 23/342 (6%)

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRA 274
           GL   T   N ++  L     +D AY+     +      D  +Y TLI G  +    + A
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233

Query: 275 LKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHG 334
           L+L  +MK++   P+ FTY  +I G   + + ++A  +   +  SG+ P+E T   ++HG
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHG 293

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPD----IVTCNILLSGLCREGILEKALKFFRSWILKG 390
                   KAL+  ++ +++  + +    ++ C+ +L  L    + ++ + F R  + +G
Sbjct: 294 VFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRG 353

Query: 391 KAVD-SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
                +  +N +++ L K   L +   +   + ++ +      Y A+   L ++   EE 
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413

Query: 450 QKFTSIMVETGKINHQV-------------VQPNTSKTPEEID-----PSSISYSEKINE 491
            +    ++  G I++               +  N S+   ++      P+ ++++  IN 
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLING 473

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           HC  G    A ++ E   + G+  +  T+ ++++GL + +++
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRT 515


>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
 gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
          Length = 462

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 207/412 (50%), Gaps = 4/412 (0%)

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
           N+ ++  C+ GWL  A  VV    +    PDV TYN L+   C    L+    +   M  
Sbjct: 16  NVGLAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRMRE 75

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
             + PD VTYN+LI     SG ++ A  L DE+   G+ P++ ++N ++    + G  + 
Sbjct: 76  AGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEH 135

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A ++  +M + G +P   TYNTL+D   KAG+   A+RM   + R GL +  +T NT+++
Sbjct: 136 AYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAYRMFRYLQRAGLPVGIVTYNTMIN 195

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
            LC   K+  A M+L    +  +  + V+Y T++   FR  +  + L+ +  + E   + 
Sbjct: 196 GLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYIS 255

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
             F Y  +I  L + G+ ++A      ++QSG   D   +NT+IH  C EG+++ A +  
Sbjct: 256 DAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKIDDAFELL 315

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           N M E   + D  T +IL++GLC+ G +E A K   S  +     + V YN LI +LCK 
Sbjct: 316 NMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMDMQSNVVAYNCLIDALCKC 375

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
             ++ A  +L  M  K    D +TY ++   L + GR   A KF  I +  G
Sbjct: 376 HEVDAAIKILHSMRLK----DDFTYTSLVHGLCKVGRYHMASKFLRICLHEG 423



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 192/402 (47%), Gaps = 4/402 (0%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD VTYNT+L A  +   L+    ++  M++ G+ P+  TYN L++G  + G    
Sbjct: 41  LGLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRMREAGVRPDAVTYNSLITGADRSGLTVR 100

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+ + D M ++   PD W+YN L++    +G  E A+R+  +M    + P   TYNTL++
Sbjct: 101 ALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMADKGVAPCATTYNTLLD 160

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             F++G +  A+++   L   G+    VT+N MI   CK GK+  A  +++ +     +P
Sbjct: 161 GLFKAGHATNAYRMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAP 220

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           + VTY T++    + G  E+       +   G   +     T++  L  + ++ EA    
Sbjct: 221 NAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYC 280

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G  LD   Y TLI    ++ K + A +L + M+E  +    +T++ ++ GL + 
Sbjct: 281 ELMIQSGSTLDNACYNTLIHLRCQEGKIDDAFELLNMMEEGGLESDEYTFSILVNGLCKM 340

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ E A   +  +    M  +   +N +I   C   +V+ A++  + M  K    D  T 
Sbjct: 341 GQIEAAEKQIWSMEMMDMQSNVVAYNCLIDALCKCHEVDAAIKILHSMRLK----DDFTY 396

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
             L+ GLC+ G    A KF R  + +G  V +     +IS L
Sbjct: 397 TSLVHGLCKVGRYHMASKFLRICLHEGNNVLASAKRAVISGL 438



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 172/347 (49%), Gaps = 4/347 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++    + G      DL  +M + G+ P+  +YN L+    + G 
Sbjct: 73  MREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGH 132

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A RV   M      P   TYN L++G   AG    A+R+ + ++   L   +VTYNT
Sbjct: 133 PEHAYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAYRMFRYLQRAGLPVGIVTYNT 192

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   +SG+   A  ++ EL      PNAVT+  ++K   + G+ ++  +   ++ E G
Sbjct: 193 MINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGG 252

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           +  D   Y T+I A  K G M+EA    ++M + G  ++    NT++H  C E K+D+A+
Sbjct: 253 YISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKIDDAF 312

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   + G   DE ++  L+ G  +  +   A K    M+   +  +   YN +I  L
Sbjct: 313 ELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMDMQSNVVAYNCLIDAL 372

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
            +  + + AI    ++L S  + D+ T+ +++HG C  G+   A +F
Sbjct: 373 CKCHEVDAAI----KILHSMRLKDDFTYTSLVHGLCKVGRYHMASKF 415



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 160/355 (45%), Gaps = 52/355 (14%)

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
           V  R  L ++T  +N  L  LC    LD A  ++  A + G   D V+Y TL+  + R  
Sbjct: 2   VRSRAQLALSTRLMNVGLAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVA 61

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
             +  + +   M+E  + P   TYN++I G  +SG T +A+D+ +E+L+SG+ PD  ++N
Sbjct: 62  GLDAGIAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYN 121

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            ++H     G  E A +    M +K   P   T N LL GL + G    A + FR     
Sbjct: 122 ALMHCLFRSGHPEHAYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAYRMFRYLQRA 181

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP--------------------- 428
           G  V  VTYNT+I+ LCK  ++  A  +L E+   +  P                     
Sbjct: 182 GLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQG 241

Query: 429 --------------DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
                         D + Y  + +ALV+ GR++EA  +  +M+++G              
Sbjct: 242 LETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSG-------------- 287

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +D +   Y+  I+  C +G+  DA ++     + G+  ++ T+  L+NGL K
Sbjct: 288 -STLDNA--CYNTLIHLRCQEGKIDDAFELLNMMEEGGLESDEYTFSILVNGLCK 339



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 126/268 (47%), Gaps = 22/268 (8%)

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           Q+  ST   N  +  L + G  ++A  ++ + ++ G+ PD  T+NT++   C    ++  
Sbjct: 7   QLALSTRLMNVGLAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAG 66

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
           +   ++M E   +PD VT N L++G  R G+  +AL  F   +  G A DS +YN L+  
Sbjct: 67  IAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHC 126

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF------------ 452
           L +    E A+ + ++M +K + P   TY  +   L ++G    A +             
Sbjct: 127 LFRSGHPEHAYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAYRMFRYLQRAGLPVG 186

Query: 453 -----TSI--MVETGKINH-QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
                T I  + ++GK+ + ++V     +T  E  P++++Y+  +      GR++  L+ 
Sbjct: 187 IVTYNTMINGLCKSGKVGYARMVLKELGRT--EHAPNAVTYTTVMKCCFRYGRFEQGLET 244

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           F    + G   +   Y  +++ L+K+ +
Sbjct: 245 FLSLLEGGYISDAFPYTTVISALVKKGR 272


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 239/446 (53%), Gaps = 2/446 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D+  +  +   LF++ K +EV  L + +  +G+V   TTY ++V G C  G   +A
Sbjct: 14  GVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA 73

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + +V  ++   + P ++ YN +I G C A  + +A+++ ++M    ++P+V TY  L+N 
Sbjct: 74  LELVRELSGVYT-PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNG 132

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              S ++  A ++  E+  +G KPN +T+  +I+   + G+ID+A +++          D
Sbjct: 133 LCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL- 243
            +T  T++   CKA  +++A + M+ M + G++ N +T + ++H      +LD       
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
              +++G  L+  +Y   +    +    +RA K  +E+++  ++P   TY+ +I   +++
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + ++++L ++ ++G+ PD  T++T+I+  C E + + A +    M      P++VT 
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++ GLC+ G +++  + +   +    + D VTY+ +++ L K   L+ A  L   ++ 
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEA 449
            + GPD   Y+ + T+L  +G+LEEA
Sbjct: 433 SREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 189/380 (49%), Gaps = 36/380 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    YN I+  L +  ++ +   +L  M ++ +VPN  TY IL++G C+    K A  V
Sbjct: 86  PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +N   P+  TY  LI     AG ++EA R+  E  SL+L  DV+T  T++    +
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY--------------------------- 160
           + R  +A K ++E+ + G++PN VT++ ++  +                           
Sbjct: 206 ASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAA 265

Query: 161 ---------CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                    CK G +D+A K V  + ++G  PD VTY+ LI+   +AG  + +  +++ M
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            R G+K + +T +T+++ LC E+K  +A+ LL      G   + V+Y +++ G  +  K 
Sbjct: 326 RRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKM 385

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           +   ++++ M + +  P   TY+ ++ GLS++G  + A+ +   +  S   PD   ++ +
Sbjct: 386 DEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMV 445

Query: 332 IHGFCSEGQVEKALQFHNKM 351
           I   C  G++E+A   ++ M
Sbjct: 446 ITSLCRAGKLEEACGMYHGM 465



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 195/419 (46%), Gaps = 23/419 (5%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D   +  L  + F   +  E  +L   L   G+     T+ +++   C  G  ++A ++V
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           R +    ++P    YN +I   C+A  + +A+++++ M  + +  N  T   +L+ LC  
Sbjct: 78  RELS-GVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRS 136

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K   A  +     + G   + ++YGTLI    R  + + AL++  E +  ++     T 
Sbjct: 137 NKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             ++ GL ++ + + A+  + E+ Q G+ P+E T++ ++HGF   G++++ ++F  +  E
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE--E 254

Query: 354 KSFKPDIVTCNIL---LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           K+ K   +        L  LC+ G L++A K        G   D VTY+ LI++  +  +
Sbjct: 255 KARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ 314

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
            + +  LL +M    + PD  TY+ +   L +  + ++A +   +M   G          
Sbjct: 315 FDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG---------- 364

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
              +P    P+ ++Y+  ++  C  G+  +  +++E   +   + +  TY  +MNGL K
Sbjct: 365 ---SP----PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSK 416



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 150/280 (53%), Gaps = 6/280 (2%)

Query: 7   LP-DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           LP D +T  TI+  L K  +L++    + +M++ G+ PN  TY+ LV G+ + G L   +
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248

Query: 66  RVVDLMTQNKSLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           R  +     K    +   Y   ++  C AG L+ A +  +E+    ++PDVVTY+ LIN 
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G+   + +L++++  +G+KP+ VT++ +I   CKE K   A +++  ME  G  P+
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML-- 242
            VTYN+++D  CK+G M+E  R+ ++M +     + +T + I++ L     LD A  L  
Sbjct: 369 VVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
           L  +S+ G   D  +Y  +IT   R  K   A  ++  M+
Sbjct: 429 LIKSSREGP--DAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 186/402 (46%), Gaps = 22/402 (5%)

Query: 134 AFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           A KL++  + E G+K ++    ++     +  K  +  ++   +   G      TY  ++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITL-NTILHTLCCEKKLDEAYMLLNSASKRGY 251
           D  C AG   +A  ++  +   G+   T+ + N I+  LC   ++ +AY +L    +   
Sbjct: 62  DGLCGAGMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             +  +Y  L+ G  R  K   A +++ EMK     P+  TY  +I  LS++G+ ++A+ 
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++ E     +  D  T  TI+ G C   +++ AL+F  +M +   +P+ VT + L+ G  
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 372 REGILEKALKFFRSW-ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           + G L++ ++FF      KG ++++  Y   + +LCK   L+ A   + E+ +  + PD 
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
            TY+ +      +G+ + + +    M   G                 + P  ++YS  IN
Sbjct: 300 VTYSMLINTFARAGQFDASLELLEDMRRNG-----------------VKPDVVTYSTLIN 342

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
             C + +++DA ++ E     G   N  TY ++M+GL K  K
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 135/246 (54%), Gaps = 1/246 (0%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           +   Y   LDAL K G L+  R  + ++++ G+VP+  TY++L++ + + G    ++ ++
Sbjct: 263 EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELL 322

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M +N   PDV TY+ LIN  C     ++AFRL + ME+    P+VVTYN++++   +S
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  E  ++ + + +    P+ VT++I++    K G +D A K+   ++ +   PD   Y
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAY 442

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI-TLNTILHTLCCEKKLDEAYMLLNSAS 247
           + +I + C+AG +EEA  M   M       N    L  ++  LC  ++ D A  ++  AS
Sbjct: 443 SMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVAS 502

Query: 248 KRGYYL 253
           +RG+ +
Sbjct: 503 ERGHRM 508



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY+ +++   + G+ +   +LL DM++ G+ P+  TY+ L++  CK    ++A
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+++LM    S P+V TYN +++G C +G ++E  R+ + M   +  PDVVTY+ ++N 
Sbjct: 354 FRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNG 413

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G    A KL + +      P+A  ++++I   C+ GK+++AC +   ME      +
Sbjct: 414 LSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDN 473

Query: 185 -CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
            C     L+ A C A   + A R+++V   +G +M 
Sbjct: 474 ICRALAGLVAALCDAERTDSARRIVEVASERGHRMT 509



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 63/107 (58%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+ VTYN+++D L K GK++EV  +   M K    P+  TY+I+++G  K G 
Sbjct: 360 MEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGM 419

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           L  A+++ +L+  ++  PD   Y+M+I   C AG LEEA  +   ME
Sbjct: 420 LDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 239/470 (50%), Gaps = 10/470 (2%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           P+  ++N++I   C    ++ A  + + M   K LPD  TY TL++   +  R  EA  L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G  P+ V +N++I   CK+G + +  K+V NM   G  P+ VTYNTLI   C 
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G +++A  +++ M       N +T  T+++ L  +++  +A  LL+S  +RGY+L++  
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI+G F++ KA  A+ LW +M E+   P+   Y+ ++ GL + GK  +A ++LN ++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
            SG +P+  T+++++ GF   G  E+A+Q   +M +     +    ++L+ GLC  G ++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM---EEKKLGPDRYTYA 434
           +A+  +   +  G   D+V Y+++I  LC    ++ A  L  EM   EE K  PD  TY 
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-----SKTPEEIDPSSISYSEKI 489
            +   L     +  A    + M++ G  +  V+  NT     S+     D       E +
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRG-CDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603

Query: 490 NEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
                + R   A  I E    K +A   ST+  ++  + K +K I+ A+D
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK-INAAID 652



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 236/462 (51%), Gaps = 8/462 (1%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLN---EVRD-LLSDMKKQGLVPNRTTYNILVSGYCKLG 59
           F C     ++N++L+ +  +G  +   E  D +++      + PN  ++N+++   CKL 
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLR 201

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           ++  A+ V   M + K LPD +TY  L++G C    ++EA  L  EM+S    P  V YN
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI+   + G      KL+D +   G  PN VT+N +I   C +GK+DKA  ++  M  +
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+ VTY TLI+   K     +A R++  M  +G  +N    + ++  L  E K +EA
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             L    +++G   + V Y  L+ G  R+ K N A ++ + M     +P+ +TY++++ G
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG 441

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
             ++G  E+A+ +  E+ ++G   ++  ++ +I G C  G+V++A+   +KM+    KPD
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKA---VDSVTYNTLISSLCKERRLEDAFG 416
            V  + ++ GLC  G ++ ALK +   + + +     D VTYN L+  LC ++ +  A  
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVE-SGRLEEAQKFTSIMV 457
           LL+ M ++   PD  T       L E S   ++ + F   +V
Sbjct: 562 LLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 252/535 (47%), Gaps = 59/535 (11%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T ++++++    G  + V  LLS ++ +  V    ++ ++   Y K     +A   VDL 
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKA---VDLF 135

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG-- 129
            +                     M++E FR ++ ++S         +N+++N     G  
Sbjct: 136 HR---------------------MVDE-FRCKRSVKS---------FNSVLNVIINEGLY 164

Query: 130 -RSMEAFK-LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            R +E +  +++      I PN ++ N++IK  CK   +D+A ++ R M E    PD  T
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y TL+D  CK   ++EA  ++D M  +G   + +  N ++  LC +  L     L+++  
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G   +EV+Y TLI G     K ++A+ L + M   + +P+  TY  +I GL +  +  
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ +L+ + + G   ++  ++ +I G   EG+ E+A+    KM EK  KP+IV  ++L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLCREG   +A +     I  G   ++ TY++L+    K    E+A  +  EM++    
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            +++ Y+ +   L   GR++EA    S M+  G                 I P +++YS 
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG-----------------IKPDTVAYSS 507

Query: 488 KINEHCSQGRYKDALQIFEE---TRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            I   C  G    AL+++ E     +     +  TY  L++GL   +K IS+AVD
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC-MQKDISRAVD 561


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 267/560 (47%), Gaps = 56/560 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD VTY T+LD       L+ V    S+M+K G VP+  T+ ILV   CK G   EA   
Sbjct: 328 PDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAK 387

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D+M     LP++ TYN LI G      L++A  +   MESL + P   TY   I+ + +
Sbjct: 388 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGK 447

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG S+ A +  +++   GI PN V  N  +    K G+  +A +I   +++ G  PD VT
Sbjct: 448 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 507

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN ++    K G ++EA +++  M     + + I +N++++TL    ++DEA+ +     
Sbjct: 508 YNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 567

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +       V+Y TL+ G  ++ K   A++L++ M ++   P+T T+N +   L ++ +  
Sbjct: 568 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 627

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A+ ML +++  G +PD  T+NTII G    GQV++A+ F ++M +K   PD VT   LL
Sbjct: 628 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLL 686

Query: 368 SGLCREGILEKALKFFRSW-------------------ILKGKAVD---SVTYNTLISSL 405
            G+ + G++E A K   ++                   IL    +D   S +   + + +
Sbjct: 687 PGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGI 746

Query: 406 CKER------------RLEDAFG--LLSEMEEKKLG--PDRYTYAAIHTALVESGRLEEA 449
           C++             +  +A G  +L E   K LG  P   TY  +   L+E+  +E A
Sbjct: 747 CRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 806

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
           Q     +  TG I                 P   +Y+  ++ +   G+  +  +I++E  
Sbjct: 807 QDVFLQVKNTGCI-----------------PDVATYNFLLDAYGKSGKIDELFEIYKEMS 849

Query: 510 QKGIAINKSTYMNLMNGLIK 529
                 N  T+  +++GL+K
Sbjct: 850 AHECEPNTITHNIVISGLVK 869



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 240/514 (46%), Gaps = 70/514 (13%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  TY TI   L  KG L +    L  M++ G V N  +YN L+    K  +  EAM V 
Sbjct: 154 DTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 213

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
             M  +   P + TY+ L+ G      +E    L KEME+L L P+V T+   I     +
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+  EA++++  +D+ G  P+ VT+ ++I   C   K+D A ++   M+     PD VTY
Sbjct: 274 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTY 333

Query: 189 NT-----------------------------------LIDANCKAGNMEEAFRMMDVMGR 213
            T                                   L+DA CKAGN  EAF  +DVM  
Sbjct: 334 ITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRD 393

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +G+  N  T NT++  L    +LD+A  + ++    G      +Y   I  Y +   +  
Sbjct: 394 QGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVS 453

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           AL+ +++MK + I P+    NA ++ L+++G+  +A  +   L   G++PD  T+N ++ 
Sbjct: 454 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 513

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPD---------------------------------- 359
            +   G++++A++  ++MVE   +PD                                  
Sbjct: 514 CYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 573

Query: 360 -IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
            +VT N LL+GL + G +++A++ F   + KG   +++T+NTL   LCK   +  A  +L
Sbjct: 574 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 633

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            +M +    PD +TY  I   LV++G+++EA  F
Sbjct: 634 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 667



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 251/556 (45%), Gaps = 34/556 (6%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  T+   +  L + GK+NE  ++L  M  +G  P+  TY +L+   C    
Sbjct: 251 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 310

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  V   M   +  PD  TY  L++ + +   L+   +   EME    +PDVVT+  
Sbjct: 311 LDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTI 370

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++   ++G   EAF  +D + + GI PN  T+N +I    +  ++D A +I  NME  G
Sbjct: 371 LVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TY   ID   K+G+   A    + M  KG+  N +  N  L++L    +  EA 
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 490

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +       G   D V+Y  ++  Y +  + + A+KL  EM E    P     N++I  L
Sbjct: 491 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTL 550

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++ + ++A  M   + +  + P   T+NT++ G    G++++A++    MV+K   P+ 
Sbjct: 551 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 610

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N L   LC+   +  ALK     +  G   D  TYNT+I  L K  ++++A     +
Sbjct: 611 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 670

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT---------------------SIMVET 459
           M +K + PD  T   +   +V++G +E+A K                       SI+ E 
Sbjct: 671 M-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEA 729

Query: 460 G-----KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE-TRQKGI 513
           G       + ++V     +  + I    I YS K N          A  +FE+ T+  G+
Sbjct: 730 GIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNA------SGARMLFEKFTKDLGV 783

Query: 514 AINKSTYMNLMNGLIK 529
                TY  L+ GL++
Sbjct: 784 QPKLPTYNLLIGGLLE 799



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 153/567 (26%), Positives = 265/567 (46%), Gaps = 57/567 (10%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            G  P+ V  N  L +L K G+  E + +   +K  GLVP+  TYN+++  Y K+G + EA
Sbjct: 465  GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 524

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++++  M +N   PDV   N LIN    A  ++EA+++   M+ +KL P VVTYNTL+  
Sbjct: 525  IKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 584

Query: 125  FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              ++G+  EA +L + + + G  PN +T N +    CK  ++  A K++  M + G  PD
Sbjct: 585  LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 644

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              TYNT+I    K G ++EA      M +K +  + +TL T+L  +     +++AY ++ 
Sbjct: 645  VFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIA 703

Query: 245  --------------------------------SASKR----GYYLDEVSYGTLITGY-FR 267
                                            S S+R    G   D  S    I  Y F+
Sbjct: 704  NFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFK 763

Query: 268  DEKANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
               A+ A  L+++  K+  + P   TYN +I GL ++   E A D+  ++  +G IPD  
Sbjct: 764  HNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVA 823

Query: 327  TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            T+N ++  +   G++++  + + +M     +P+ +T NI++SGL + G ++ AL  +   
Sbjct: 824  TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883

Query: 387  IL-KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
            +  +  +  + TY  LI  L K  RL +A  L   M +    P+   Y  +     ++G 
Sbjct: 884  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943

Query: 446  LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
             + A      MV+ G                 + P   +YS  ++  C  GR  + L  F
Sbjct: 944  ADAACALFKRMVKEG-----------------VRPDLKTYSVLVDCLCMVGRVDEGLHYF 986

Query: 506  EETRQKGIAINKSTYMNLMNGLIKRRK 532
             E ++ G+  +   Y  ++NGL K  +
Sbjct: 987  RELKESGLNPDVVCYNLIINGLGKFHR 1013



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 238/518 (45%), Gaps = 17/518 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T N +L+AL   GK+ E+  +   M+K+ +  +  TY  +       G L++A   +  M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   + + ++YN LI+    +    EA  + + M      P + TY++L+    +    
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
                L+ E++  G+KPN  T  I I+   + GKI++A +I++ M++ G  PD VTY  L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           IDA C A  ++ A  +   M     K + +T  T+L      + LD      +   K G+
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D V++  L+    +      A    D M+++ I+P+  TYN +I GL +  + + A++
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           + + +   G+ P   T+   I  +   G    AL+   KM  K   P+IV CN  L  L 
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 481

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G   +A + F      G   DSVTYN ++    K   +++A  LLSEM E    PD  
Sbjct: 482 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVI 541

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
              ++   L ++ R++EA K    M E                  ++ P+ ++Y+  +  
Sbjct: 542 VVNSLINTLYKADRVDEAWKMFMRMKEM-----------------KLKPTVVTYNTLLAG 584

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
               G+ ++A+++FE   QKG   N  T+  L + L K
Sbjct: 585 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 622



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 249/560 (44%), Gaps = 91/560 (16%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC P+ +T+NT+ D L K  ++     +L  M   G VP+  TYN ++ G  K G +KEA
Sbjct: 605  GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 664

Query: 65   MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR--------------------LRK 104
            M     M +    PD  T   L+ G   AG++E+A++                    L  
Sbjct: 665  MCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMG 723

Query: 105  EMESLKLLPDVVTYN-----------------TLINRFFESGRSMEAFKLIDELDEH-GI 146
             + +   + + V+++                  +I   F+   +  A  L ++  +  G+
Sbjct: 724  SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGV 783

Query: 147  KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            +P   T+N++I    +   I+ A  +   ++  G  PD  TYN L+DA  K+G ++E F 
Sbjct: 784  QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFE 843

Query: 207  MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            +   M     + NTIT N ++  L     +D+A  L        YY              
Sbjct: 844  IYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDL--------YY-------------- 881

Query: 267  RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
                        D M +R   P+  TY  +I GLS+SG+  +A  +   +   G  P+  
Sbjct: 882  ------------DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCA 929

Query: 327  TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
             +N +I+GF   G+ + A     +MV++  +PD+ T ++L+  LC  G +++ L +FR  
Sbjct: 930  IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989

Query: 387  ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTALVESGR 445
               G   D V YN +I+ L K  RLE+A  L +EM++ + + PD YTY ++   L  +G 
Sbjct: 990  KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049

Query: 446  LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
            +EEA          GKI +++ +         ++P+  +++  I  +   G+ + A  ++
Sbjct: 1050 VEEA----------GKIYNEIQRAG-------LEPNVFTFNALIRGYSLSGKPEHAYAVY 1092

Query: 506  EETRQKGIAINKSTYMNLMN 525
            +     G + N  TY  L N
Sbjct: 1093 QTMVTGGFSPNTGTYEQLPN 1112



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 2/263 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSD-MKKQGLVPNRTTYNILVSGYCKLG 59
            M    C P+ +T+N ++  L K G +++  DL  D M  +   P   TY  L+ G  K G
Sbjct: 848  MSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 907

Query: 60   WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
             L EA ++ + M+     P+   YN+LING+  AG  + A  L K M    + PD+ TY+
Sbjct: 908  RLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 967

Query: 120  TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
             L++     GR  E      EL E G+ P+ V +N++I    K  ++++A  +   M+++
Sbjct: 968  VLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKS 1027

Query: 180  -GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
             G +PD  TYN+LI     AG +EEA ++ + + R GL+ N  T N ++       K + 
Sbjct: 1028 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1087

Query: 239  AYMLLNSASKRGYYLDEVSYGTL 261
            AY +  +    G+  +  +Y  L
Sbjct: 1088 AYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 151/349 (43%), Gaps = 17/349 (4%)

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           T N +++A    G +EE   + D+M ++ +K +T T  TI   L  +  L +A   L   
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G+ L+  SY  LI    +      A++++  M      PS  TY++++ GL +    
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           E  + +L E+   G+ P+  TF   I      G++ +A +   +M ++   PD+VT  +L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +  LC    L+ A + F          D VTY TL+      R L+      SEME+   
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
            PD  T+  +  AL ++G   EA     +M + G                 I P+  +Y+
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQG-----------------ILPNLHTYN 404

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
             I       R  DAL+IF+     G+     TY+  ++   K   S+S
Sbjct: 405 TLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVS 453



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 1/121 (0%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKK-QGLVPNRTTYNILVSGYCKLGWLKE 63
            G  PD V YN I++ L K  +L E   L ++MKK +G+ P+  TYN L+      G ++E
Sbjct: 993  GLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEE 1052

Query: 64   AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            A ++ + + +    P+V+T+N LI G+  +G  E A+ + + M +    P+  TY  L N
Sbjct: 1053 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112

Query: 124  R 124
            R
Sbjct: 1113 R 1113



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 52/242 (21%)

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           S ++    T N ++     +G++E+     + M ++  K D  T   +   L  +G L +
Sbjct: 114 SNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQ 173

Query: 379 ALKFFRSWILKGKAVDSVTYNTLI-----SSLC--------------------------- 406
           A    R     G  +++ +YN LI     S  C                           
Sbjct: 174 APFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMV 233

Query: 407 ---KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
              K R +E   GLL EME   L P+ YT+      L  +G++ EA +    M + G   
Sbjct: 234 GLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG--- 290

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                           P  ++Y+  I+  C+  +   A ++F + +      ++ TY+ L
Sbjct: 291 --------------CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITL 336

Query: 524 MN 525
           ++
Sbjct: 337 LD 338


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 246/526 (46%), Gaps = 17/526 (3%)

Query: 2    EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            E +G LP+    N +L  L ++ + ++ R L  +M  +    +  +  +LV G C    +
Sbjct: 935  EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRV 994

Query: 62   KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +E +++++       +P V  YN+LI+G+C  G +     L  EME+   LP +VTY +L
Sbjct: 995  EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSL 1054

Query: 122  INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
            IN   + G   +   L  E+ + G  PN   +N +I   C      +A  I++ M  +G 
Sbjct: 1055 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1114

Query: 182  SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
             PD +T+NTLI   C  G++ +A   +    R+ L  N ++   ++H  C   +L  A  
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1174

Query: 242  LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
            LL     RG+  D V++G LI G     K + AL + ++M ERQ+ P    YN +I GL 
Sbjct: 1175 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1234

Query: 302  QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIV 361
            +      A ++L E+L+  + PDE  + T+I GF     +  A +    M  K   PDIV
Sbjct: 1235 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIV 1294

Query: 362  TCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            +CN ++ G C+ G++ +A+    +    G   D  TY T+IS   K+  L  A   L +M
Sbjct: 1295 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1354

Query: 422  EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
             ++K  P+  TY+++     ++G  + A+   + M                   E + P+
Sbjct: 1355 IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM-----------------QAEALSPN 1397

Query: 482  SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             ++Y+  I     + +   A   FE       + N  T   L+NGL
Sbjct: 1398 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1443



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 241/546 (44%), Gaps = 19/546 (3%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P  + ++T+L  L +  + + V D L  M   G  P R     LV+ Y   G L +A  +
Sbjct: 870  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM 929

Query: 68   VD-LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
             + +  Q  SLP+V   N L+         ++A +L  EM       D  +   L+    
Sbjct: 930  CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC 989

Query: 127  ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
               R  E  KLI+     G  P+ V +N++I  YC+ G + +   ++  ME NGF P  V
Sbjct: 990  LERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLV 1049

Query: 187  TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            TY +LI+   K G++E+   +   M ++G   N    N+++  LC  +   +A ++L   
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109

Query: 247  SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
               G   D +++ TLITG   +    +A     E   R++ P+  +Y  +I G    G+ 
Sbjct: 1110 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1169

Query: 307  EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
              A D+L E++  G  PD  TF  +IHG    G+V +AL    KM E+   PD+   N+L
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229

Query: 367  LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
            +SGLC++ +L  A       + K    D   Y TLI    +   L DA  +   ME K +
Sbjct: 1230 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 1289

Query: 427  GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV----------QPNTSKT-- 474
             PD  +  A+     + G + EA    S M + G I  +            Q N +    
Sbjct: 1290 CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 1349

Query: 475  ------PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                    +  P+ ++YS  IN +C  G    A  +F   + + ++ N  TY  L+  L 
Sbjct: 1350 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLF 1409

Query: 529  KRRKSI 534
            K+ K +
Sbjct: 1410 KKDKVL 1415



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 225/495 (45%), Gaps = 50/495 (10%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G LP  VTY ++++ L KKG L ++  L  +M+K+G  PN   YN ++   C    
Sbjct: 1039 METNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRS 1098

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAG-------MLEEAFR------------ 101
              +AM ++  M  +   PD+ T+N LI G C+ G        L EA R            
Sbjct: 1099 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 1158

Query: 102  ----------------LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
                            L  EM      PDVVT+  LI+    +G+  EA  + +++ E  
Sbjct: 1159 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1218

Query: 146  IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
            + P+   +N++I   CK+  +  A  I+  M E    PD   Y TLID   ++ N+ +A 
Sbjct: 1219 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 1278

Query: 206  RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++ + M  KG+  + ++ N ++   C    + EA + +++  K G   DE +Y T+I+GY
Sbjct: 1279 KIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1338

Query: 266  FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
             +    N AL+   +M +R+  P+  TY+++I G  ++G T+ A  +   +    + P+ 
Sbjct: 1339 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 1398

Query: 326  TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL--CREGIL------- 376
             T+  +I     + +V +A  +   M+     P+ VT + L++GL  C   ++       
Sbjct: 1399 VTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNT 1458

Query: 377  ------EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
                  +  L  F+  +       +  YN +I SLC+   L +A    + M +K   P+ 
Sbjct: 1459 SEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNP 1518

Query: 431  YTYAAIHTALVESGR 445
             T+ ++       G+
Sbjct: 1519 ITFLSLLYGFCSVGK 1533



 Score = 45.4 bits (106), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 50/177 (28%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            C P+ VTY+++++   K G  +    L ++M+ + L PN  TY IL+    K   +  A 
Sbjct: 1359 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1418

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGW----------------------------------- 90
               + M  N   P+  T + L+NG                                    
Sbjct: 1419 LYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDI 1478

Query: 91   ---------------CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                           C   ML EA   +  M     +P+ +T+ +L+  F   G+S+
Sbjct: 1479 GDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSV 1535



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 48/108 (44%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P N  YN I+ +L +   L E  D  + M K+G VPN  T+  L+ G+C +G       +
Sbjct: 1481 PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTI 1540

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
            +    Q +    ++ Y  L + +    +  E  R+ + +   K L  V
Sbjct: 1541 LPNEFQQEEFEIIFRYKFLFDQYATESVCCEVSRVLQHLAGCKSLQRV 1588


>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
 gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
          Length = 949

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 257/536 (47%), Gaps = 34/536 (6%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL--- 61
           G  PD   Y  ++ +L K GKL E  +L   M + GL P+   + I ++ +   GW+   
Sbjct: 288 GVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMF-ISIARFFPKGWVVLF 346

Query: 62  -KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A++ V  +     L ++ +   L  G  N  + +EA  L  E+ +  +LP  +  N 
Sbjct: 347 VRKALKAVAKLDCGAKLLELSS---LAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNL 403

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I      GR   ++ L+ +L  +G +P+ +T+NI+IK  C++ ++D A  ++  M+  G
Sbjct: 404 MIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRG 463

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  T + ++ A CK G +E A  +   M + G++ +    ++I+  LC  ++L EA 
Sbjct: 464 VRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAE 523

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L    + G   DE+ Y +LI GY    +     +++DEM +R + P    Y ++I GL
Sbjct: 524 ATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGL 583

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K  +A+  L  +L+ G+ P    +  +I+ F  +G V   L     M++ +  PD+
Sbjct: 584 VKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDL 643

Query: 361 VTCNILLSGLC----REGI---LEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRL 411
           +T   L++G+C    R G+   L K LK  R  + +   + +D+       + +C E  +
Sbjct: 644 ITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMI 703

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
           + A G++ ++EE  + PD + Y  +   L  + ++++A    S+M +TG           
Sbjct: 704 QVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTG----------- 752

Query: 472 SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
                 I P+ ++Y+  +N     G    A+Q+F      G   +K TY   + GL
Sbjct: 753 ------ILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGL 802



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 225/527 (42%), Gaps = 34/527 (6%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           +  ++  L  +G +++ R L   M + GL P    Y  L   YCK     +A  +  LM 
Sbjct: 120 FALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCKARRSLDASDMCQLML 179

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEA---FRLRKEMESLKLLPDVVTYNTLINRFFESG 129
                 D      LI  +C  G LE A   FR  K  E ++L  D   Y T+I   FE G
Sbjct: 180 IKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQL--DAYAYTTMIWGLFEHG 237

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
           R     ++  E+ + GI+P+A T+N+MI+WYCK   +  A  I + M   G +PD   Y 
Sbjct: 238 RVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYT 297

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH------TLCCEKKLDEAYMLL 243
            L+ + CK G + EA  + D M   GL  + +   +I         +   +K  +A   L
Sbjct: 298 ILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKL 357

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +  +K    L E+S  +L  G         A  L DE+    ++P     N MI  +   
Sbjct: 358 DCGAK----LLELS--SLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSE 411

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ + +  +L +L+  G  P   T+N +I   C + +++ A      M  +  +PD+ T 
Sbjct: 412 GRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTN 471

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           +I+++  C+ G +E AL  F      G       Y+++I  LC+ RRL++A   L +M  
Sbjct: 472 SIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIR 531

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           + L PD   Y ++      + +     +    M++ G                 + P   
Sbjct: 532 EGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRG-----------------LQPGPH 574

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           +Y   IN      + + AL   E   ++GIA     Y  L+N   ++
Sbjct: 575 AYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRK 621



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 225/472 (47%), Gaps = 15/472 (3%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            +GC P  +TYN ++  L ++ ++++ R L++ M+ +G+ P+ +T +I+V+ YCK+G ++
Sbjct: 426 AYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIE 485

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A+ +   M ++   P +  Y+ +I   C    L+EA    ++M    L PD + Y +LI
Sbjct: 486 SALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLI 545

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N +  + ++    ++ DE+ + G++P    +  +I    K  KI KA   +  M E G +
Sbjct: 546 NGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIA 605

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC----------- 231
           P  V Y  LI+   + G++     ++ +M +  +  + IT   ++  +C           
Sbjct: 606 PQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPS 665

Query: 232 CEKKLDEA-YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
             KKL EA YML     +    +D  +          +E    A  +  +++E  ++P  
Sbjct: 666 LAKKLKEARYMLFRMLPQ---IIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDL 722

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             YN MI GL ++ K + A  +L+ + Q+G++P+  T+  +++     G +  A+Q  N 
Sbjct: 723 HIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNS 782

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           +       D +T N  + GL   G +++AL F      +G      +Y+ L+  L  E  
Sbjct: 783 LNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENA 842

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           ++    L  +M  +   P    Y ++   L + GR  EA +  ++M++  K+
Sbjct: 843 IDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKRKM 894



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/567 (22%), Positives = 236/567 (41%), Gaps = 54/567 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    + ++    + G ++        + + G  P+  +   L+   C      EAM V
Sbjct: 45  PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + L   N S   V  + +LI G C+ G +++A  L   M    L P V  Y +L   + +
Sbjct: 105 LVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCK 164

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME---------- 177
           + RS++A  +   +   G+  +      +I+ +C+EG+++ A  + R M+          
Sbjct: 165 ARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAY 224

Query: 178 --------------------------ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
                                     + G  PD  TYN +I   CK+  +  A  +  VM
Sbjct: 225 AYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVM 284

Query: 212 GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
            R G+  +      ++ +LC + KL EA  L +   + G + D V + ++   + +    
Sbjct: 285 IRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVV 344

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
               K    + +          +++  G S     ++A  +L+E++ S ++P     N +
Sbjct: 345 LFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLM 404

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I   CSEG+++ +     K+V    +P ++T NI++  LC +  ++ A         +G 
Sbjct: 405 IIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGV 464

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
             D  T + ++++ CK   +E A  L  EM +  + P    Y +I   L    RL+EA+ 
Sbjct: 465 RPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEA 524

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               M+  G                 + P  I Y+  IN +    + ++  +IF+E  ++
Sbjct: 525 TLRQMIREG-----------------LAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKR 567

Query: 512 GIAINKSTYMNLMNGLIKRRKSISKAV 538
           G+      Y +L+NGL+K  K I KA+
Sbjct: 568 GLQPGPHAYGSLINGLVKGNK-IRKAL 593



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 1/287 (0%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD    + L+  + + G++  A      + + G   +  +   +L  +C      EA  
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L  +      L    +  LI G   +   ++A  L+D M    + P    Y ++ +   
Sbjct: 104 VLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDI 360
           ++ ++  A DM   +L  GM  D      +I  FC EG++E AL    +M  ++  + D 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
                ++ GL   G ++  L+ +   I +G   D+ TYN +I   CK + +  A  +   
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKV 283

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           M    + PD   Y  +  +L + G+L EA+     M+E+G     V+
Sbjct: 284 MIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVM 330


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 230/427 (53%), Gaps = 4/427 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD   Y  +    FK+G  ++   LL +M   G+ PN   Y I +   C+   ++EA
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ +LM ++  LP+++TY+ +I+G+C  G + +A+ L KE+   +LLP+VV + TL++ 
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++   + A  L   + + G+ PN   +N +I  +CK G + +A  ++  ME    SPD
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  LI+  C    + EA R+   M  + +  ++ T N+++H  C E  +++A  L +
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433

Query: 245 SASKRGYYLDEVSYGTLITGY--FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
             +  G   + +++ TLI GY   RD KA  A+ L+ EM  + I+P   TY A+I    +
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKA--AMGLYFEMTIKGIVPDVVTYTALIDAHFK 491

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
               ++A+ + +++L++G+ P++ TF  ++ GF  EG++  A+ F+ +  ++    + V 
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
              L+ GLC+ G + +A +FF      G   D  +Y +++    +E+R+ D   L  +M 
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611

Query: 423 EKKLGPD 429
           +  + P+
Sbjct: 612 KTGILPN 618



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 222/462 (48%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD+    +IL+ L ++ + + V      M  +GLVP+   Y +L     K G   +  
Sbjct: 160 CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKE 219

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +++D MT     P+V+ Y + I   C    +EEA ++ + M+   +LP++ TY+ +I+ +
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++G   +A+ L  E+    + PN V    ++  +CK  ++  A  +  +M + G  P+ 
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             YN LI  +CK+GNM EA  ++  M    L  +  T   +++ LC E ++ EA  L   
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                 +    +Y +LI GY ++    +AL L  EM    + P+  T++ +I G      
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ +  E+   G++PD  T+  +I     E  +++AL+ ++ M+E    P+  T   
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ G  +EG L  A+ F++    +    + V +  LI  LC+   +  A    S+M    
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
           + PD  +Y ++    ++  R+ +       M++TG + + +V
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 232/486 (47%), Gaps = 20/486 (4%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
            +++L+  + ++G  +EA+ V   M   K  PD      ++NG       +  +   + M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
            S  L+PDV  Y  L    F+ G   +  KL+DE+   GIKPN   + I I   C++ K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           ++A K+   M+++G  P+  TY+ +ID  CK GN+ +A+ +   +    L  N +   T+
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +   C  ++L  A  L     K G   +   Y  LI G+ +      A+ L  EM+   +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P  FTY  +I GL    +  +A  +  ++    + P   T+N++IHG+C E  +E+AL 
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             ++M     +P+I+T + L+ G C    ++ A+  +    +KG   D VTY  LI +  
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           KE  +++A  L S+M E  + P+ +T+A +     + GRL       S+ ++  + N+Q 
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL-------SVAIDFYQENNQ- 542

Query: 467 VQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                    +    + + ++  I   C  G    A + F + R  GI  +  +Y++++ G
Sbjct: 543 ---------QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593

Query: 527 LIKRRK 532
            ++ ++
Sbjct: 594 HLQEKR 599



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 183/373 (49%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+   Y   +  L +  K+ E   +   MKK G++PN  TY+ ++ GYCK G 
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +++A  +   +   + LP+V  +  L++G+C A  L  A  L   M    + P++  YN 
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +SG  +EA  L+ E++   + P+  T+ I+I   C E ++ +A ++ + M+   
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   TYN+LI   CK  NME+A  +   M   G++ N IT +T++   C  + +  A 
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    + +G   D V+Y  LI  +F++     AL+L+ +M E  I P+  T+  ++ G 
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+   AID   E  Q     +   F  +I G C  G + +A +F + M      PDI
Sbjct: 525 WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDI 584

Query: 361 VTCNILLSGLCRE 373
            +   +L G  +E
Sbjct: 585 CSYVSMLKGHLQE 597



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 185/366 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G LP+  TY+ ++D   K G + +   L  ++    L+PN   +  LV G+CK   
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L  A  +   M +    P+++ YN LI+G C +G + EA  L  EMESL L PDV TY  
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN      +  EA +L  ++    I P++ T+N +I  YCKE  +++A  +   M  +G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +T++TLID  C   +++ A  +   M  KG+  + +T   ++     E  + EA 
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L +   + G + ++ ++  L+ G++++ + + A+  + E  +++   +   +  +I GL
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            Q+G   +A    +++   G+ PD  ++ +++ G   E ++   +     M++    P++
Sbjct: 560 CQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL 619

Query: 361 VTCNIL 366
           +   +L
Sbjct: 620 LVNQLL 625



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY  ++DA FK+  + E   L SDM + G+ PN  T+  LV G+ K G L  A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533

Query: 65  MRVVDLMTQNKSLPDVWT---YNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
              +D   +N      W    +  LI G C  G +  A R   +M S  + PD+ +Y ++
Sbjct: 534 ---IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSM 590

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +    +  R  +   L  ++ + GI PN + + ++ ++Y   G +  AC +  +      
Sbjct: 591 LKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTV 650

Query: 182 SPDC 185
           S  C
Sbjct: 651 SNSC 654



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 20/209 (9%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            F+ +I  F   G  E+AL    +M      PD   C  +L+GL R    +     ++  
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           I +G   D   Y  L     K+        LL EM    + P+ Y Y      L    ++
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           EEA+K   +M + G +                 P+  +YS  I+ +C  G  + A  +++
Sbjct: 251 EEAEKMFELMKKHGVL-----------------PNLYTYSAMIDGYCKTGNVRQAYGLYK 293

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           E     +  N   +  L++G  K R+ ++
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARELVT 322


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 216/410 (52%), Gaps = 8/410 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+ V YNT++ AL K GK+   R L+++M +    P+  T+N+L+S YC+   
Sbjct: 107 MKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEEN 162

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+ +++       +PDV T   ++   C AG + E   + + +ES+  + DVV YNT
Sbjct: 163 LVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNT 222

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F   G++    +++ +++  G  PN  T+NI+   YC  G +D A  +  +M+ +G
Sbjct: 223 LIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDG 282

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVM--GRKGLKMNTITLNTILHTLCCEKKLDE 238
            + + +TY+TLI   C  G ME+ F+++++M   R G        N+I++ L  + + +E
Sbjct: 283 INWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEE 342

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A   L    K   +   V     I G+  +     A +++D+M +   +PS   Y  +I 
Sbjct: 343 ALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIH 400

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  Q G   +A +++NE++  G  P   TFN +I  FC +G+V  AL+    MV +   P
Sbjct: 401 GFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLP 460

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           D+ + + ++  LC +G  +KA++ F   + K    D  T+N+++  L +E
Sbjct: 461 DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 510



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 220/440 (50%), Gaps = 8/440 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G   D+ T+  ++  L    ++ +   LL  MK +G  PN   YN ++   CK G +  A
Sbjct: 76  GVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRA 135

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++ M +    P   T+N+LI+ +C    L +A  L ++  S+  +PDVVT   ++  
Sbjct: 136 RSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGI 191

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR  E  ++++ ++  G   + V +N +IK +C  GK     +++++ME  G  P+
Sbjct: 192 LCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPN 251

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TYN L    C +G ++ A  + + M   G+  N +T +T++  LC   ++++ + +L 
Sbjct: 252 VDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILE 311

Query: 245 SASK-RGYYLDEVS-YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              + RG     +S Y ++I G ++  +   AL+   +M+  ++ P     +  I G   
Sbjct: 312 LMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME--KLFPRAVDRSLRILGFCN 369

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G    A  + +++++ G +P    +  +IHGFC +G V +A +  N+MV+  + P   T
Sbjct: 370 EGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPT 429

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            N L+S  C +G +  ALK     + +G   D  +Y+ ++ +LC +   + A  L  +M 
Sbjct: 430 FNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMV 489

Query: 423 EKKLGPDRYTYAAIHTALVE 442
           EK + PD  T+ ++   L +
Sbjct: 490 EKDILPDYSTWNSMLLCLTQ 509



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 252/524 (48%), Gaps = 29/524 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK--LGWLK 62
           G  PD   + TI+  L +   + ++  +L  + K G  P+   +N ++    K  +   +
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAR 65

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           E  R    M  N    D +T+ +L+ G C    + +AF+L + M+S    P+ V YNT+I
Sbjct: 66  EFYR--KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 123

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           +   ++G+   A  L++E+    ++P+ VT N++I  YC+E  + +A  ++      GF 
Sbjct: 124 HALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 179

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           PD VT   ++   CKAG + E   +++ +   G  ++ +  NT++   C   K    + +
Sbjct: 180 PDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRV 239

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L     +G   +  +Y  L +GY      + A+ L+++MK   I  +  TY+ +I GL  
Sbjct: 240 LKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCS 299

Query: 303 SGKTEQAIDMLNELLQS--GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            G+ E    +L  + +S  G     + +N+II+G   + Q E+AL+F  KM EK F P  
Sbjct: 300 GGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM-EKLF-PRA 357

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  ++ + G C EG +  A + +   I +G     + Y  LI   C++  + +AF L++E
Sbjct: 358 VDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINE 417

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M +    P   T+ A+ +A    G++  A K    MV  G +                 P
Sbjct: 418 MVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCL-----------------P 460

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
              SYS  ++  C++G ++ A+++F +  +K I  + ST+ +++
Sbjct: 461 DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 504



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 220/462 (47%), Gaps = 18/462 (3%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLL-SDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           FG  P    +N+ILD L K+  ++  R+     M   G+  +  T+ IL+ G C    + 
Sbjct: 40  FGENPSLKIFNSILDVLVKE-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIG 98

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
           +A +++ +M      P+   YN +I+  C  G +  A  L  EM    + P  VT+N LI
Sbjct: 99  DAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLI 154

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           + + +    ++A  L+++    G  P+ VT   ++   CK G++ +  +++  +E  G  
Sbjct: 155 SAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGV 214

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
            D V YNTLI   C  G  +   R++  M  KG   N  T N +    C    LD A  L
Sbjct: 215 VDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDL 274

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ------IMPSTFTYNAM 296
            N     G   + ++Y TLI G     +     K+ + M+E +      I P    YN++
Sbjct: 275 FNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISP----YNSI 330

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I+GL +  + E+A++ L ++ +  + P     +  I GFC+EG +  A + +++M+++  
Sbjct: 331 IYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGG 388

Query: 357 KPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFG 416
            P ++    L+ G C++G + +A +     +  G    + T+N LIS+ C + ++  A  
Sbjct: 389 VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALK 448

Query: 417 LLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
           L+ +M  +   PD  +Y+ +  AL   G  ++A +    MVE
Sbjct: 449 LMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVE 490



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 199/420 (47%), Gaps = 27/420 (6%)

Query: 113 PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKI 172
           PD   + T++     +    +  K++D + + G  P+    N ++    KE  ID A + 
Sbjct: 9   PDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKE-DIDLAREF 67

Query: 173 VRN-MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
            R  M  NG S D  T+  L+   C    + +AF+++ VM  +G   NT+  NT++H LC
Sbjct: 68  YRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALC 127

Query: 232 CEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTF 291
              K+  A  L+N   +      +V++  LI+ Y ++E   +AL L ++      +P   
Sbjct: 128 KNGKVGRARSLMNEMVEP----SDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVV 183

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
           T   ++  L ++G+  + +++L  +   G + D   +NT+I GFC  G+ +   +    M
Sbjct: 184 TATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDM 243

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
             K   P++ T NIL SG C  G+L+ A+  F      G   + +TY+TLI  LC   R+
Sbjct: 244 EIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRM 303

Query: 412 EDAFGLLSEMEEKKLGPDR--YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           ED F +L  MEE + G       Y +I   L +  + EEA +F + M             
Sbjct: 304 EDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM------------- 350

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                 E++ P ++  S +I   C++G   DA +++++  ++G   +   Y+ L++G  +
Sbjct: 351 ------EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQ 404



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 16/223 (7%)

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G  PDE+ F TI+ G      V + ++  + + +    P +   N +L  L +E I + A
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDI-DLA 64

Query: 380 LKFFR-SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
            +F+R   ++ G + D  T+  L+  LC   R+ DAF LL  M+ +   P+   Y  +  
Sbjct: 65  REFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIH 124

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEID--------------PSSIS 484
           AL ++G++  A+   + MVE   +   V+     +    +               P  ++
Sbjct: 125 ALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVT 184

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            ++ +   C  GR  + +++ E     G  ++   Y  L+ G 
Sbjct: 185 ATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGF 227


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 196/357 (54%), Gaps = 3/357 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD + Y++++D L K G+++E R L+  M  +G  P    Y  +V+G CK G ++EA
Sbjct: 171 GHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEA 230

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++ +  M + +  P V TY+ ++ G+   G +EEAF + +EM      PD ++Y   I  
Sbjct: 231 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEA 290

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +  GR  EA K+ + + E G KP+  T+ I+I  +CKEG +  A  ++R M++    P+
Sbjct: 291 LYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPN 350

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  ++D   K+  +EEA  +   + + G+  +T+T NT+++ LC  KK+DEA  LL 
Sbjct: 351 RYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLR 410

Query: 245 SASKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              +R   L+   V+Y  +I G  +     RA  L  EM +  ++P  FTY ++I  L+ 
Sbjct: 411 EMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAG 470

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           +GK  +A+++L E+L++G+ PD+ T+ T++   C    V+ A     +M+     P+
Sbjct: 471 AGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEMMRNGHTPN 526



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 242/524 (46%), Gaps = 47/524 (8%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  ++N +L     +     V  LL +MK +G+  N  T+ +++S  C    L +A+  
Sbjct: 27  PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  T                        EEA RL + +E+    PD VTY  +++  F+
Sbjct: 87  FNSRT------------------------EEACRLFEAIEA----PDSVTYTAIVDGLFK 118

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G      +  +++     +P  +T+ +++   CK  K+++AC +   M   G  PD + 
Sbjct: 119 AGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y++LID   KAG ++EA +++D+M  +G     +   +I+  LC   ++ EA   +    
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +R       +Y  ++TGY    K   A  + +EM +R   P T +Y   I  L   G+ E
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 298

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A  +   +++ G  PD  T+  II  FC EG +  A      M + + KP+     +++
Sbjct: 299 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIM 358

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-- 425
            G  +   LE+AL+ ++  +  G    +VTYNT+I++LCK +++++A  LL EM+ +K  
Sbjct: 359 DGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEE 418

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P   TY+ I   L + G  E A    + M++ G I                 P   +Y
Sbjct: 419 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI-----------------PDCFTY 461

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I      G+   A+++ EE  + GI  +  TY  L+  L +
Sbjct: 462 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR 505



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 202/398 (50%), Gaps = 3/398 (0%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P  +TY  ++D L K  K+    D+  +M ++G  P+   Y+ L+ G  K G + EA 
Sbjct: 137 CEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEAR 196

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           ++VDLM      P    Y  ++ G C  G ++EA +  +EM   +L P V TY+ ++  +
Sbjct: 197 KLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGY 256

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
              G+  EAF +++E+ +    P+ +++ + I+     G+ ++A K+   M E G  PD 
Sbjct: 257 IGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDM 316

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
            TY  +ID  CK G+M  A  ++ +M +  +K N      I+       +L+EA  L   
Sbjct: 317 HTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQR 376

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER--QIMPSTFTYNAMIWGLSQS 303
             K G     V+Y T+I    + +K + AL+L  EM+ R  ++ PS  TY+ +I GL + 
Sbjct: 377 ILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKV 436

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G  E+A D+L E++ +G+IPD  T+ ++I      G+V +A++   +M++    PD  T 
Sbjct: 437 GMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTY 496

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
             L+  LCR  + + A    +  +  G   +  T+  +
Sbjct: 497 GTLVQILCRSDV-DAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 219/452 (48%), Gaps = 9/452 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGL-------VPNRTTYNILVS 53
           M+  G   +  T+  IL AL  +  L++     +   ++          P+  TY  +V 
Sbjct: 55  MKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVD 114

Query: 54  GYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
           G  K G     +   + M  +K  P + TY +L++G C A  +E A  + +EM      P
Sbjct: 115 GLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKP 174

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           D++ Y++LI+   ++GR  EA KL+D +   G  P AV +  ++   CK G+I +A K +
Sbjct: 175 DIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTI 234

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           + M      P   TY+ ++      G +EEAF +M+ M  +    +TI+    +  L   
Sbjct: 235 QEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSI 294

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            + +EA  +  +  ++G   D  +YG +I  + ++     A  +   M +  + P+ + Y
Sbjct: 295 GRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIY 354

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             ++ G  +S + E+A+++   +L+ G++P   T+NT+I+  C   ++++AL+   +M  
Sbjct: 355 TMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQR 414

Query: 354 K--SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
           +    +P IVT ++++ GL + G+ E+A       I  G   D  TY +LI +L    ++
Sbjct: 415 RKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKV 474

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVES 443
             A  LL EM +  + PD +TY  +   L  S
Sbjct: 475 SRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 506



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 188/427 (44%), Gaps = 61/427 (14%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF------------------------- 181
           +PN  + NI+++ +      +    ++R M+  G                          
Sbjct: 26  EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85

Query: 182 -----------------SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
                            +PD VTY  ++D   KAGN +      + M     +   +T  
Sbjct: 86  YFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYT 145

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++  LC   K++ A  +     ++G+  D ++Y +LI G  +  + + A KL D M  R
Sbjct: 146 VLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIAR 205

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+   Y +++ GL + G+ ++A+  + E+ +  + P   T++ I+ G+   G+VE+A
Sbjct: 206 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEA 265

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISS 404
                +M ++   PD ++  + +  L   G  E+A K F + + KG   D  TY  +I +
Sbjct: 266 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 325

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
            CKE  +  A  +L  M++  + P+RY Y  I    V+S RLEEA +    +++ G    
Sbjct: 326 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG---- 381

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS--TYMN 522
                        I PS+++Y+  IN  C   +  +AL++  E +++   +  S  TY  
Sbjct: 382 -------------ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSM 428

Query: 523 LMNGLIK 529
           +++GL K
Sbjct: 429 IIHGLGK 435



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 115/277 (41%), Gaps = 62/277 (22%)

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF------------------ 335
           N+++  L + G+   A+      +     P+ ++FN ++ GF                  
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 336 -----------------CSEGQVEKALQFHNKMVEKSFK-------PDIVTCNILLSGLC 371
                            C+   ++KA+ + N   E++ +       PD VT   ++ GL 
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G  +  L+++   +        +TY  L+  LCK  ++E A  +  EM  K   PD  
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
            Y+++   L ++GR++EA+K   +M+  G                   P++++Y+  +  
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARGP-----------------PPTAVAYTSIVAG 220

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
            C  GR ++A++  +E R++ +     TY  ++ G I
Sbjct: 221 LCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYI 257


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 185/327 (56%)

Query: 33  LSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCN 92
           L +M+  GLVP+   Y +++ G+C+ G + +A+RV D M     LPDV TYN L+NG C 
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
              L +A  L  EM    + PD+ T+ TLI+ +   G+  +A +L D +    ++P+ VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 153 HNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMG 212
           +N +I   C++G +DKA  +  +M      P+ VTY+ LID++C+ G +E+AF  +D M 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 213 RKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKAN 272
            KG+  N +T N+I+   C    + +    L          D ++Y TLI GY +++K +
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 273 RALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTII 332
            A KL + M++ ++ P   TYN +I G S  G  ++A  +  ++   G+ PD  T+ ++I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 333 HGFCSEGQVEKALQFHNKMVEKSFKPD 359
           +G  + G  ++A Q H++M+++ F PD
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 182/342 (53%), Gaps = 17/342 (4%)

Query: 173 VRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC 232
           +R M   G  PD V Y  +I   C+AG M +A R+ D M   G   + +T NT+L+ LC 
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           E++L +A  LLN   +RG   D  ++ TLI GY  + K ++AL+L+D M  +++ P   T
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           YN +I G+ + G  ++A D+ +++    + P+  T++ +I   C +GQVE A  F ++M+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
            K   P+I+T N ++ G CR G + K  KF +  ++   + D +TYNTLI    KE ++ 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
           DAF LL+ ME++K+ PD  TY  +       G ++EA      M   G            
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG------------ 291

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
                I+P   +Y   IN H + G  K+A Q+ +E  Q+G A
Sbjct: 292 -----IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFA 328



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 169/289 (58%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G GCLPD VTYNT+L+ L K+ +L +   LL++M+++G+ P+  T+  L+ GYC  G 
Sbjct: 42  MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 101

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A+++ D M   +  PD+ TYN LI+G C  G L++A  L  +M S ++ P+ VTY+ 
Sbjct: 102 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 161

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   E G+  +AF  +DE+   GI PN +T+N +IK YC+ G + K  K ++ M  N 
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SPD +TYNTLI    K   M +AF+++++M ++ ++ + +T N +++       + EA 
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            +      +G   D  +Y ++I G+     +  A +L DEM +R   P 
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 174/319 (54%)

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
           +PD   Y M+I G+C AG++ +A R+R EM     LPDVVTYNTL+N   +  R ++A  
Sbjct: 13  VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 72

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L++E+ E G+ P+  T   +I  YC EGK+DKA ++   M      PD VTYNTLID  C
Sbjct: 73  LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           + G++++A  + D M  + +  N +T + ++ + C + ++++A+  L+    +G   + +
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y ++I GY R    ++  K   +M   ++ P   TYN +I G  +  K   A  +LN +
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
            +  + PD  T+N +I+GF   G V++A     KM  K  +PD  T   +++G    G  
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312

Query: 377 EKALKFFRSWILKGKAVDS 395
           ++A +     + +G A D 
Sbjct: 313 KEAFQLHDEMLQRGFAPDD 331



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 168/316 (53%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G+ P+ V + ++I  +C+ G +  A ++   M   G  PD VTYNTL++  CK   + +A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             +++ M  +G+  +  T  T++H  C E KLD+A  L ++   +    D V+Y TLI G
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             R    ++A  LWD+M  R+I P+  TY+ +I    + G+ E A   L+E++  G++P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+N+II G+C  G V K  +F  KM+     PD++T N L+ G  +E  +  A K   
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
               +    D VTYN LI+       +++A  +  +M  K + PDRYTY ++    V +G
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310

Query: 445 RLEEAQKFTSIMVETG 460
             +EA +    M++ G
Sbjct: 311 NSKEAFQLHDEMLQRG 326



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 179/325 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  FG +PD V Y  ++    + G +++   +  +M   G +P+  TYN L++G CK   
Sbjct: 7   MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +A  +++ M +    PD+ T+  LI+G+C  G L++A +L   M + +L PD+VTYNT
Sbjct: 67  LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+     G   +A  L D++    I PN VT++I+I  +C++G+++ A   +  M   G
Sbjct: 127 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 186

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ +TYN++I   C++GN+ +  + +  M    +  + IT NT++H    E K+ +A+
Sbjct: 187 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAF 246

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN   K     D V+Y  LI G+        A  ++++M  + I P  +TY +MI G 
Sbjct: 247 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 306

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDE 325
             +G +++A  + +E+LQ G  PD+
Sbjct: 307 VTAGNSKEAFQLHDEMLQRGFAPDD 331



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 171/326 (52%)

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKE 163
           +EM    L+PD V Y  +I  F  +G   +A ++ DE+   G  P+ VT+N ++   CKE
Sbjct: 5   REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 64

Query: 164 GKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITL 223
            ++  A  ++  M E G  PD  T+ TLI   C  G +++A ++ D M  + L+ + +T 
Sbjct: 65  RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 124

Query: 224 NTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
           NT++  +C +  LD+A  L +    R  + + V+Y  LI  +    +   A    DEM  
Sbjct: 125 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 184

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           + I+P+  TYN++I G  +SG   +    L +++ + + PD  T+NT+IHG+  E ++  
Sbjct: 185 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 244

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +  N M ++  +PD+VT N+L++G    G +++A   F     KG   D  TY ++I+
Sbjct: 245 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 304

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPD 429
                   ++AF L  EM ++   PD
Sbjct: 305 GHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 160/303 (52%), Gaps = 20/303 (6%)

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQA 309
           G   D V Y  +I G+ R    + AL++ DEM     +P   TYN ++ GL +  +   A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 310 IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSG 369
             +LNE+ + G+ PD  TF T+IHG+C EG+++KALQ  + M+ +  +PDIVT N L+ G
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 370 LCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPD 429
           +CR+G L+KA   +     +    + VTY+ LI S C++ ++EDAFG L EM  K + P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 430 RYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------------------ 471
             TY +I      SG + + QKF   M+   K++  ++  NT                  
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMM-VNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 249

Query: 472 -SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                E++ P  ++Y+  IN     G  ++A  IFE+   KGI  ++ TYM+++NG +  
Sbjct: 250 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 309

Query: 531 RKS 533
             S
Sbjct: 310 GNS 312



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 21/199 (10%)

Query: 358 PDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           PD V   +++ G CR G++  AL+     +  G   D VTYNTL++ LCKERRL DA GL
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT------ 471
           L+EM E+ + PD  T+  +       G+L++A +    M+   ++   +V  NT      
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ-RLRPDIVTYNTLIDGMC 132

Query: 472 -------------SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                             EI P+ ++YS  I+ HC +G+ +DA    +E   KGI  N  
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192

Query: 519 TYMNLMNGLIKRRKSISKA 537
           TY +++ G   R  ++SK 
Sbjct: 193 TYNSIIKGYC-RSGNVSKG 210


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 225/435 (51%), Gaps = 22/435 (5%)

Query: 41  LVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF 100
             PN  TYN+L+ G+CK G + +A+ V   M  +  LP+  T N L+ G C  G +  A 
Sbjct: 21  FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 80

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWY 160
           +L +EM++   LP   ++N L+  FF +GR++E FK   E+   G++P+  +++I++   
Sbjct: 81  KLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFK---EMKASGVEPDLESYHILLSAL 137

Query: 161 CKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
              G++ +A  +   M     SPD +TYN L+D  CK G   EA  +M  + + G + N 
Sbjct: 138 SDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNV 194

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
            T + I++  C   K++EA+ +     +     + V++ TLI G+ +      A+KL+ E
Sbjct: 195 FTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAE 254

Query: 281 MKERQIMPSTFTYNAMIWGLSQS-GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           M++     +  TYN +I  L +  G    A+D+ N+L  +G+ P   T+N++I GF SE 
Sbjct: 255 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF-SE- 312

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           +    L+    M  +  KPD++T N L+SGLC    +E A + F        A +  T+N
Sbjct: 313 RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMAC---APNVTTFN 369

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            LI  LC ++++E+A  +L  M      PD  T+  I  A  ++G + +A++    M++ 
Sbjct: 370 FLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKH 425

Query: 460 GKINHQVVQPNTSKT 474
           G        PNT  T
Sbjct: 426 G------FYPNTYTT 434



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 211/415 (50%), Gaps = 43/415 (10%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TYN ++    K G++++   + SDMK  GL+PN +T N L+ G C++G +  A+++
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR------LRKEMESLKLL--------- 112
              M     LP   ++N+L+ G+  AG   E F+      +  ++ES  +L         
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGR 142

Query: 113 --------------PDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
                         PD++TYN L++ + + G++ EA  L+ E+ + G +PN  T++I+I 
Sbjct: 143 MAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIIN 202

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
            YCK  K+++A ++   M E+   P+ VT+NTLI   CKAG +E+A ++   M + G K 
Sbjct: 203 CYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKA 262

Query: 219 NTITLNTILHTLCCEKKLDEAYM---LLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
             +T NT++ +LC  KK    Y    L N     G     V+Y +LI G+   E+AN  L
Sbjct: 263 TIVTYNTLIDSLC--KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGL 318

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L   M      P   TYN +I GL  + + E A  + N +      P+ TTFN +I G 
Sbjct: 319 RLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGL 375

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           C++ +VE+A    ++M      PD+ T N ++   C+ G +  A +  +  +  G
Sbjct: 376 CAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHG 426



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 164/299 (54%), Gaps = 10/299 (3%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD +TYN ++D   K G+  E + L+ ++ K G  PN  TY+I+++ YCKL  ++EA 
Sbjct: 155 CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 214

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V   M ++  +P+  T+N LI G+C AGMLE+A +L  EME +     +VTYNTLI+  
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 274

Query: 126 FES-GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +  G    A  L ++L+  G+ P  VT+N +I+ + +  + +   +++ +M   G  PD
Sbjct: 275 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPD 332

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +TYN LI   C A  +E+A R+ + M       N  T N ++  LC +KK++EA  +L+
Sbjct: 333 VITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 389

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             +      D  ++ T+I  + +    + A ++  +M +    P+T+T  A+  G+  S
Sbjct: 390 RMTAP----DMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSS 444



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 193/440 (43%), Gaps = 51/440 (11%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           +A +L  E+      PNA T+N++I+ +CK G++ +A  +  +M+ +G  P+  T NTL+
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C+ G M  A ++   M        + + N +L       +  E +  + ++   G  
Sbjct: 68  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKAS---GVE 124

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  SY  L++      +   A  L+  M      P   TYN ++ G  + G+T +A  +
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSL 181

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + E+L++G  P+  T++ II+ +C   +VE+A +   KM+E +  P+ VT N L++G C+
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER----------------------- 409
            G+LE A+K F      G     VTYNTLI SLCK+R                       
Sbjct: 242 AGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 301

Query: 410 -----------RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
                      R  D   LL  M  +   PD  TY  + + L  + R+E+AQ+  + M  
Sbjct: 302 TYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMAC 361

Query: 459 TGKI---NHQVVQPNTSKTPEE--------IDPSSISYSEKINEHCSQGRYKDALQIFEE 507
              +   N  +      K  EE          P   +++  I   C  G   DA ++ ++
Sbjct: 362 APNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKD 421

Query: 508 TRQKGIAINKSTYMNLMNGL 527
             + G   N  T   L +G+
Sbjct: 422 MLKHGFYPNTYTTYALAHGI 441



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 146/306 (47%), Gaps = 23/306 (7%)

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
           +K D+A  L        +  +  +Y  LI G+ +  + ++A+ ++ +MK   ++P+  T 
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
           N ++ GL + G+   A+ +  E+     +P   + N ++ GF   G   +A++F  +M  
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKA 120

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLED 413
              +PD+ + +ILLS L   G + +A   F +      + D +TYN L+   CK  +  +
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYE 177

Query: 414 AFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK 473
           A  L+ E+ +    P+ +TY+ I     +  ++EEA +    M+E+  +           
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV----------- 226

Query: 474 TPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
                 P++++++  I   C  G  +DA+++F E  + G      TY  L++ L K+R  
Sbjct: 227 ------PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 280

Query: 534 ISKAVD 539
           +  AVD
Sbjct: 281 VYTAVD 286


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 232/451 (51%), Gaps = 14/451 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT+L  L    +  +   L+++M +    PN  T+   +  +C+ G L  A+++
Sbjct: 210 PDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQL 269

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M Q    PDV  Y+ L+NG+   G +++A  L   +  +   P+ + YN  +     
Sbjct: 270 LDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIEL---LNGMLCKPNTICYNAALKGLCI 326

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +LI E+      PN  T +++    C+ G +D A +++  M + G  PD V 
Sbjct: 327 AQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVI 386

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI +  + G +++A ++++ M       + I+ N  L  LC  ++ D+A  L+    
Sbjct: 387 YNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQML 443

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +    L E+++  LI    ++ + N A++++++M +    P   TY+++I GLS+ G  E
Sbjct: 444 REDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVE 503

Query: 308 QAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            AI    EL QS    PD   +N ++ G C   + E A +  + M  K   P+ +T NIL
Sbjct: 504 SAI----ELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNIL 559

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           ++ LC++G++++A++ F      G   D  TYN LI+   ++ RL+DA  LLS M  K  
Sbjct: 560 INSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK-- 617

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMV 457
            PD  +Y +    L  + R +EA++  + M+
Sbjct: 618 -PDAVSYNSALKGLCRAERWKEAEEVVAEML 647



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 248/510 (48%), Gaps = 32/510 (6%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY T+++   + G+L +   L++ M    + P+  TYN ++ G C     ++A  ++  
Sbjct: 181 VTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAE 237

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +N   P+  T+   I  +C  G+L+ A +L   M      PDVV Y+TL+N F E GR
Sbjct: 238 MVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGR 297

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A +L++ +     KPN + +N  +K  C   + +   +++  M      P+  T++ 
Sbjct: 298 VDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSM 354

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L    C+ G ++ A  +++ M + G + + +  NT++++   + ++D+A  LLNS     
Sbjct: 355 LTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSP 414

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D +S+   + G  R E+ + A +L  +M          T+N +I  L Q+G+   AI
Sbjct: 415 ---DVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAI 471

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++  ++ + G  PD  T++++I+G   +G VE A++    M     KPDI   N +L GL
Sbjct: 472 EVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGL 528

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR    E A +   +   K    + +T+N LI+SLC++  ++ A  +  +M +    PD 
Sbjct: 529 CRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDI 588

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           +TY A+     E GRL++A++  S M                       P ++SY+  + 
Sbjct: 589 FTYNALINGFSEQGRLDDARRLLSTM--------------------SCKPDAVSYNSALK 628

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             C   R+K+A ++  E  +     N+ T+
Sbjct: 629 GLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/517 (26%), Positives = 256/517 (49%), Gaps = 31/517 (5%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V  N ++  L  + +L +   +L  +K  G   +  ++N LV+GYC+ G L +A R++  
Sbjct: 113 VACNILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLAA 171

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
              + +  +V TY  LING+C +G L +A  L   + S+ + PD  TYNT++     + +
Sbjct: 172 AGLSGAA-NVVTYTTLINGYCRSGRLADALAL---IASMPVAPDTYTYNTVLMGLCGARQ 227

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A  L+ E+  +   PN VT    I+ +C+ G +D+A +++  M + G +PD V Y+T
Sbjct: 228 WEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYST 287

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L++   + G +++A  +++ M     K NTI  N  L  LC  ++ ++   L+    ++ 
Sbjct: 288 LVNGFSEQGRVDDAIELLNGM---LCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKD 344

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +E ++  L +   ++   + A+++ ++M +    P    YN +I+  S+ G+ + A+
Sbjct: 345 CLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDAL 404

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +LN +  S   PD  +FN  + G C   + + A +   +M+ +      +T NIL+  L
Sbjct: 405 KLLNSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSL 461

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G +  A++ F      G   D VTY++LI+ L ++  +E A  L   M  K   PD 
Sbjct: 462 CQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDI 518

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           + Y A+   L  + R E+A +  S M                   ++  P+ I+++  IN
Sbjct: 519 FGYNAVLKGLCRAARWEDAGELISNMAR-----------------KDCPPNEITFNILIN 561

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
             C +G    A+++FE+  + G   +  TY  L+NG 
Sbjct: 562 SLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGF 598



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 231/439 (52%), Gaps = 12/439 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T + A  + G L+    LL  M + G  P+   Y+ LV+G+ + G + +A+
Sbjct: 243 CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAI 302

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +++ M      P+   YN  + G C A   E+  +L  EM     LP+  T++ L +  
Sbjct: 303 ELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCL 359

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++G    A ++++++ ++G +P+AV +N +I  + ++G++D A K++ +M     SPD 
Sbjct: 360 CQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDV 416

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +++N  +   C+A   ++A  ++  M R+   +  +T N ++ +LC   +++ A  +   
Sbjct: 417 ISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQ 476

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K G   D V+Y +LI G         A++L+  M  +   P  F YNA++ GL ++ +
Sbjct: 477 MPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGLCRAAR 533

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E A ++++ + +    P+E TFN +I+  C +G V++A++   +M +    PDI T N 
Sbjct: 534 WEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNA 593

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++G   +G L+ A +   +   K    D+V+YN+ +  LC+  R ++A  +++EM   K
Sbjct: 594 LINGFSEQGRLDDARRLLSTMSCKP---DAVSYNSALKGLCRAERWKEAEEVVAEMLRMK 650

Query: 426 LGPDRYTYAAIHTALVESG 444
             P+  T+   +   V +G
Sbjct: 651 CPPNEVTFKYANRLFVPNG 669



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 193/376 (51%), Gaps = 20/376 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PD V Y+T+++   ++G++++  +LL+ M  +   PN   YN  + G C    
Sbjct: 273 MPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQR 329

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++  +++  M +   LP+  T++ML +  C  G+++ A  + ++M      PD V YNT
Sbjct: 330 WEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNT 389

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI  F E GR  +A KL++ +      P+ ++ N  +K  C+  + D A +++  M    
Sbjct: 390 LIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQM---- 442

Query: 181 FSPDC----VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
              DC    +T+N LID+ C+ G +  A  + + M + G   + +T +++++ L  +  +
Sbjct: 443 LREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLV 502

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           + A  L  S   +    D   Y  ++ G  R  +   A +L   M  +   P+  T+N +
Sbjct: 503 ESAIELFQSMPCKP---DIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNIL 559

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I  L Q G  ++AI++  ++ + G  PD  T+N +I+GF  +G+++ A +  + M   S 
Sbjct: 560 INSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SC 616

Query: 357 KPDIVTCNILLSGLCR 372
           KPD V+ N  L GLCR
Sbjct: 617 KPDAVSYNSALKGLCR 632



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 207/413 (50%), Gaps = 28/413 (6%)

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VV  N LI +     R  +A +++D L   G   + V+HN ++  YC++G++  A +++ 
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLA 170

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
               +G + + VTY TLI+  C++G + +A  ++  M    +  +T T NT+L  LC  +
Sbjct: 171 AAGLSGAA-NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGAR 226

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           + ++A  L+    +     +EV++ T I  + ++   +RA++L D M +    P    Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            ++ G S+ G+ + AI++LN +L     P+   +N  + G C   + E   Q   +MV K
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              P+  T ++L S LC+ G+++ A++        G   D+V YNTLI S  ++ R++DA
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDA 403

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             LL+ M      PD  ++ A    L  + R ++A++    M+                 
Sbjct: 404 LKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLR---------------- 444

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            E+     ++++  I+  C  GR  +A+++FE+  + G   +  TY +L+NGL
Sbjct: 445 -EDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGL 496



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 186/362 (51%), Gaps = 9/362 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           + G  C P+ + YN  L  L    +  +V  L+ +M ++  +PN  T+++L S  C+ G 
Sbjct: 305 LNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGL 364

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  AM V++ M +    PD   YN LI  +   G +++A +L   + S+   PDV+++N 
Sbjct: 365 VDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL---LNSMPCSPDVISFNA 421

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            +     + R  +A +LI ++         +T NI+I   C+ G+++ A ++   M + G
Sbjct: 422 ALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYG 481

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD VTY++LI+   + G +E A  +   M     K +    N +L  LC   + ++A 
Sbjct: 482 CTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAG 538

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+++ +++    +E+++  LI    +    +RA++++++M +    P  FTYNA+I G 
Sbjct: 539 ELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGF 598

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           S+ G+ + A  +L+ +      PD  ++N+ + G C   + ++A +   +M+     P+ 
Sbjct: 599 SEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNE 655

Query: 361 VT 362
           VT
Sbjct: 656 VT 657


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 232/480 (48%), Gaps = 55/480 (11%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRK-E 105
            ++ L+S Y   G+  +A++   L+T+NK       + + I G  N  +L    RLR  E
Sbjct: 178 VFDALISAYVDSGFTPDAVQCFRLVTKNK-------FPVPIRGCEN--LLRRVVRLRPVE 228

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           +E                          ++ L  E+ + G  P     N+++  +CK G 
Sbjct: 229 IE-------------------------RSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGD 263

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +  A  +   + + G  P  V++NTLI   CK+G++EE FR+  VM  +G+  +  T + 
Sbjct: 264 VGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSA 323

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           +++ LC E +LDE  +L +    RG   + V++ TLI G  +  K + ALK +  M  + 
Sbjct: 324 LINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG 383

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           + P   TYNA+I GL + G  ++A  ++NE+  SG+ PD+ TF T+I G C +G +E AL
Sbjct: 384 VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESAL 443

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +   +MVE+  + D V    L+SGLCREG +  A +     +  G   D  TY  +I   
Sbjct: 444 EIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCF 503

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK+  ++  F LL EM+     P   TY A+   L + G+++ A+     M+  G     
Sbjct: 504 CKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVG----- 558

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       + P+ I+Y+  ++ H   G   D + IF    +KG+  + ++Y  L+N
Sbjct: 559 ------------VAPNDITYNILLDGHSKHGSSVD-VDIFNS--EKGLVTDYASYTALVN 603



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 189/365 (51%), Gaps = 3/365 (0%)

Query: 39  QGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEE 98
            G  P    +N+L+ G+CK G +  A  V D + +    P V ++N LI+G C +G +EE
Sbjct: 242 SGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEE 301

Query: 99  AFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
            FRL+  MES  + PDV T++ LIN   + GR  E   L DE+   G+ PN VT   +I 
Sbjct: 302 GFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLID 361

Query: 159 WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKM 218
             CK GK+D A K  + M   G  PD VTYN LI+  CK G+++EA R+++ M   GLK 
Sbjct: 362 GQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKP 421

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           + IT  T++   C +  ++ A  +     + G  LD+V++  LI+G  R+ + + A ++ 
Sbjct: 422 DKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRML 481

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            +M      P   TY  +I    + G  +    +L E+   G +P   T+N +++G C +
Sbjct: 482 TDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQ 541

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           GQ++ A    + M+     P+ +T NILL G  + G     +  F S   KG   D  +Y
Sbjct: 542 GQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS-SVDVDIFNSE--KGLVTDYASY 598

Query: 399 NTLIS 403
             L++
Sbjct: 599 TALVN 603



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 177/336 (52%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P    +N ++    K G +   R +  ++ K+GL P   ++N L+SG CK G ++E 
Sbjct: 243 GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEG 302

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+  +M      PDV+T++ LING C  G L+E   L  EM    L+P+ VT+ TLI+ 
Sbjct: 303 FRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDG 362

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+   A K    +   G++P+ VT+N +I   CK G + +A ++V  M  +G  PD
Sbjct: 363 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPD 422

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            +T+ TLID  CK G+ME A  +   M  +G++++ +    ++  LC E ++ +A  +L 
Sbjct: 423 KITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLT 482

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+  D+ +Y  +I  + +        KL  EM+    +P   TYNA++ GL + G
Sbjct: 483 DMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 542

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           + + A  +L+ +L  G+ P++ T+N ++ G    G 
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS 578



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 166/308 (53%), Gaps = 6/308 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  PD  T++ +++ L K+G+L+E   L  +M  +GLVPN  T+  L+ G CK G 
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGK 368

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A++   +M      PD+ TYN LING C  G L+EA RL  EM +  L PD +T+ T
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G    A ++   + E GI+ + V    +I   C+EG++  A +++ +M   G
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           F PD  TY  +ID  CK G+++  F+++  M   G     +T N +++ LC + ++  A 
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAK 548

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL++    G   ++++Y  L+ G+    K   ++ +     E+ ++    +Y A++   
Sbjct: 549 MLLDAMLNVGVAPNDITYNILLDGH---SKHGSSVDVDIFNSEKGLVTDYASYTALV--- 602

Query: 301 SQSGKTEQ 308
           ++S KT +
Sbjct: 603 NESSKTSK 610



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 165/329 (50%), Gaps = 3/329 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  V++NT++    K G + E   L   M+ +G+ P+  T++ L++G CK G L E 
Sbjct: 278 GLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEG 337

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             + D M     +P+  T+  LI+G C  G ++ A +  + M +  + PD+VTYN LIN 
Sbjct: 338 SLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALING 397

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G   EA +L++E+   G+KP+ +T   +I   CK+G ++ A +I R M E G   D
Sbjct: 398 LCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELD 457

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            V +  LI   C+ G + +A RM+  M   G K +  T   ++   C +  +   + LL 
Sbjct: 458 DVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLK 517

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G+    V+Y  L+ G  +  +   A  L D M    + P+  TYN ++ G S+ G
Sbjct: 518 EMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIH 333
            +   +D+ N   + G++ D  ++  +++
Sbjct: 578 SSVD-VDIFNS--EKGLVTDYASYTALVN 603



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 150/364 (41%), Gaps = 76/364 (20%)

Query: 225 TILHTLCCEKKLDEAYMLL---------NSAS---------------------------- 247
           T+LH LC  + L +A+ L+         NSAS                            
Sbjct: 124 TMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALI 183

Query: 248 ----KRGYYLDEVSYGTLITG------------------YFRDEKANRALKLWDEMKERQ 285
                 G+  D V    L+T                     R  +  R+  L+ E+ +  
Sbjct: 184 SAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSG 243

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
             P  + +N ++ G  ++G    A  + +E+ + G+ P   +FNT+I G C  G VE+  
Sbjct: 244 YPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGF 303

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
           +    M  +   PD+ T + L++GLC+EG L++    F     +G   + VT+ TLI   
Sbjct: 304 RLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQ 363

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK  +++ A      M  + + PD  TY A+   L + G L+EA++  + M  +G     
Sbjct: 364 CKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASG----- 418

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                       + P  I+++  I+  C  G  + AL+I     ++GI ++   +  L++
Sbjct: 419 ------------LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALIS 466

Query: 526 GLIK 529
           GL +
Sbjct: 467 GLCR 470


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 253/530 (47%), Gaps = 17/530 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P +  Y +++ A      + E       MK++G+  +  TY+I+V G+ K+G 
Sbjct: 332 MRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGN 391

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A R         S  +   Y  +I  +C    +++A  L +EME   +   +  Y+T
Sbjct: 392 ADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHT 451

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ +   G   +   + + L E G  P+ V++  +I  Y K GKI KA ++ + ME  G
Sbjct: 452 MMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAG 511

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +  TY+ LI+   K  +   AF + + + + GLK + +  N I+   C    +D A 
Sbjct: 512 IKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAI 571

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++    K  +     ++  +I G+ R  +  RAL ++D M+    +P+  T+NA+I GL
Sbjct: 572 CMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGL 631

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  + E+AI++L+E+  +G+ P+E T+ TI+HG+ + G   KA ++  K+ ++  + D+
Sbjct: 632 VEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDV 691

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   LL   C+ G ++ AL   +    +    ++  YN LI    +   + +A  L+ +
Sbjct: 692 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQ 751

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M++  + PD +TY +   A  ++G +  A K    M  +G      V+PN          
Sbjct: 752 MKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSG------VKPNVK-------- 797

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              +Y+  I+        + AL+ F+E +  G+  +K+ Y  LM  L+ R
Sbjct: 798 ---TYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSR 844



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 221/458 (48%), Gaps = 6/458 (1%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y  ++ A  +   +++   L+ +M+ +G+      Y+ ++ GY  +G  ++ + V + 
Sbjct: 412 IIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFER 471

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +    P V +Y  LIN +   G + +A  + K MES  +  ++ TY+ LIN F +   
Sbjct: 472 LKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKD 531

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              AF + +++ + G+KP+ V +N +I+ +C  G +D+A  +V+ M++    P   T+  
Sbjct: 532 WANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMP 591

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           +I    +AG M+ A  + D+M R G      T N ++  L  ++++++A  +L+  +  G
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAG 651

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              +E +Y T++ GY       +A + + ++++  +    +TY A++    +SG+ + A+
Sbjct: 652 VSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL 711

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +  E+    +  +   +N +I G+   G V +A     +M +   KPDI T    ++  
Sbjct: 712 AVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINAC 771

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C+ G + +A K        G   +  TY TLI    +    E A     EM+   L PD+
Sbjct: 772 CKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDK 831

Query: 431 YTYAAIHTALVESGRLEEAQKFTSI------MVETGKI 462
             Y  + TAL+    + EA     I      M+E+G I
Sbjct: 832 AVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLI 869



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 208/443 (46%), Gaps = 8/443 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G       Y+T++D     G   +   +   +K+ G  P+  +Y  L++ Y K+G 
Sbjct: 437 MEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGK 496

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ V  +M       ++ TY+MLING+        AF + +++    L PDVV YN 
Sbjct: 497 ISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNN 556

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I  F   G    A  ++ E+ +   +P + T   +I  + + G++ +A  +   M  +G
Sbjct: 557 IIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSG 616

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P   T+N LI    +   ME+A  ++D M   G+  N  T  TI+H         +A+
Sbjct: 617 CIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAF 676

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                    G  LD  +Y  L+    +  +   AL +  EM  + I  +TF YN +I G 
Sbjct: 677 EYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGW 736

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           ++ G   +A D++ ++ Q G+ PD  T+ + I+  C  G + +A +   +M     KP++
Sbjct: 737 ARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNV 796

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF---GL 417
            T   L+ G  R  + EKAL+ F+   L G   D   Y+ L+++L     + +A+   G+
Sbjct: 797 KTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAYVRPGI 856

Query: 418 LS---EMEEKKLGPDRYTYAAIH 437
           LS   EM E  L  D  T  A+H
Sbjct: 857 LSICKEMIESGLIVDMGT--AVH 877



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 166/380 (43%), Gaps = 17/380 (4%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           KP+   + +M+ +Y + G + +A +   +M   G  P    Y +LI A     +MEEA  
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
               M  +G++M+ +T + I+         D A      A  R  +++ + YG +I  Y 
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYC 422

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +    ++A  L  EM+   I      Y+ M+ G +  G  E+ + +   L + G  P   
Sbjct: 423 QTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVV 482

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           ++  +I+ +   G++ KAL+    M     K ++ T ++L++G  +      A   F   
Sbjct: 483 SYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDV 542

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           +  G   D V YN +I + C    ++ A  ++ EM++++  P   T+  I      +G +
Sbjct: 543 VKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEM 602

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           + A     +M  +G I                 P+  +++  I     + + + A++I +
Sbjct: 603 KRALDVFDMMRRSGCI-----------------PTVHTFNALILGLVEKRQMEKAIEILD 645

Query: 507 ETRQKGIAINKSTYMNLMNG 526
           E    G++ N+ TY  +M+G
Sbjct: 646 EMALAGVSPNEHTYTTIMHG 665



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 17/247 (6%)

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           ER   PS   Y  M+   ++ G   +A      +   G+ P    + ++IH +     +E
Sbjct: 299 ERIKKPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDME 358

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL    KM E+  +  +VT +I++ G  + G  + A ++F+    +   ++++ Y  +I
Sbjct: 359 EALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMI 418

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            + C+   ++ A  L+ EME + +      Y  +       G  E+       + E G  
Sbjct: 419 YAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECG-- 476

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                            PS +SY   IN +   G+   AL++ +     GI  N  TY  
Sbjct: 477 ---------------FAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSM 521

Query: 523 LMNGLIK 529
           L+NG +K
Sbjct: 522 LINGFLK 528


>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
          Length = 906

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 142/575 (24%), Positives = 260/575 (45%), Gaps = 73/575 (12%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV- 67
           D   Y T++  LF+ G+++    +  +M  +G+ P+  TYN+++  YCK  W+  AM + 
Sbjct: 222 DAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIY 281

Query: 68  -----------VDLMTQNKSLPD----VWTYNMLINGW----------------CNAGML 96
                       D M ++   PD    +        GW                C A +L
Sbjct: 282 KDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLL 341

Query: 97  E---------------EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           E               EA  L  E+ +  +LP  +  N +I      GR   ++ L+ +L
Sbjct: 342 ELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKL 401

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
             +G +P+ +T+NI+IK  C++ ++D A  ++  M+  G  PD  T + ++ A CK G +
Sbjct: 402 VAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEI 461

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           E A  +   M + G++ +    ++I+  LC  ++L EA   L    + G   DE+ Y +L
Sbjct: 462 ESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSL 521

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I GY    +     +++DEM +R + P    Y ++I GL +  K  +A+  L  +L+ G+
Sbjct: 522 INGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGI 581

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC----REGI-- 375
            P    +  +I+ F  +G V   L     M++ +  PD++T   L++G+C    R G+  
Sbjct: 582 APQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRP 641

Query: 376 -LEKALKFFRSWILK--GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            L K LK  R  + +   + +D+       + +C E  ++ A G++ ++EE  + PD + 
Sbjct: 642 SLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHI 701

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  +   L  + ++++A    S+M +TG                 I P+ ++Y+  +N  
Sbjct: 702 YNGMINGLCRANKMDDAYSLLSVMDQTG-----------------ILPNHVTYTILMNNQ 744

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
              G    A+Q+F      G   +K TY   + GL
Sbjct: 745 IRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGL 779



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 224/471 (47%), Gaps = 15/471 (3%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
            +GC P  +TYN ++  L ++ ++++ R L++ M+ +G+ P+ +T +I+V+ YCK+G ++
Sbjct: 403 AYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIE 462

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLI 122
            A+ +   M ++   P +  Y+ +I   C    L+EA    ++M    L PD + Y +LI
Sbjct: 463 SALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLI 522

Query: 123 NRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
           N +  + ++    ++ DE+ + G++P    +  +I    K  KI KA   +  M E G +
Sbjct: 523 NGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIA 582

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC----------- 231
           P  V Y  LI+   + G++     ++ +M +  +  + IT   ++  +C           
Sbjct: 583 PQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPS 642

Query: 232 CEKKLDEA-YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
             KKL EA YML     +    +D  +          +E    A  +  +++E  ++P  
Sbjct: 643 LAKKLKEARYMLFRMLPQ---IIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDL 699

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
             YN MI GL ++ K + A  +L+ + Q+G++P+  T+  +++     G +  A+Q  N 
Sbjct: 700 HIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNS 759

Query: 351 MVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERR 410
           +       D +T N  + GL   G +++AL F      +G      +Y+ L+  L  E  
Sbjct: 760 LNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENA 819

Query: 411 LEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
           ++    L  +M  +   P    Y ++   L + GR  EA +  ++M++  K
Sbjct: 820 IDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKRK 870



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/544 (22%), Positives = 233/544 (42%), Gaps = 31/544 (5%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD    + ++    + G ++        + + G  P+  +   L+   C      EAM V
Sbjct: 45  PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           + L   N S   V  + +LI G C+ G +++A  L   M    L P V  Y +L   + +
Sbjct: 105 LVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYCK 164

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME-ENGFSPDCV 186
           + RS++A  +   +   G+  +      +I+ +C+EG+++ A  + R M+ +     D  
Sbjct: 165 ARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAY 224

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK------------ 234
            Y T+I    + G ++   +M   M  +G++ +  T N ++   C  K            
Sbjct: 225 AYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKDG 284

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           KL EA  L +   + G + D V + ++   + +        K    + +          +
Sbjct: 285 KLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLLELS 344

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           ++  G S     ++A  +L+E++ S ++P     N +I   CSEG+++ +     K+V  
Sbjct: 345 SLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAY 404

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             +P ++T NI++  LC +  ++ A         +G   D  T + ++++ CK   +E A
Sbjct: 405 GCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESA 464

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             L  EM +  + P    Y +I   L    RL+EA+     M+  G              
Sbjct: 465 LHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREG-------------- 510

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
              + P  I Y+  IN +    + ++  +IF+E  ++G+      Y +L+NGL+K  K I
Sbjct: 511 ---LAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNK-I 566

Query: 535 SKAV 538
            KA+
Sbjct: 567 RKAL 570



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 156/332 (46%), Gaps = 9/332 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P    Y ++++ L K  K+ +    L  M ++G+ P    Y +L++ + + G ++  
Sbjct: 545 GLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLG 604

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCN----AGMLEEAFRLRKEMESL--KLLPDVV-T 117
           + +V LM +    PD+ TY  L+ G C      GM     +  KE   +  ++LP ++ T
Sbjct: 605 LDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDT 664

Query: 118 YN--TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
            N     N+         A  +I +L+E+G+ P+   +N MI   C+  K+D A  ++  
Sbjct: 665 RNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSV 724

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M++ G  P+ VTY  L++   + G++  A ++ + +   G   + IT NT +  L    +
Sbjct: 725 MDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGR 784

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           + EA   L    KRG+   + SY  L+     +   +  L+L+++M  +   P    Y +
Sbjct: 785 MKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTS 844

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
           ++  L++ G+  +A  +   +L+     D+ T
Sbjct: 845 LLLVLAKDGRWSEADRIFTMMLKKRKYLDKKT 876



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 136/347 (39%), Gaps = 31/347 (8%)

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           +PD    + L+  + + G++  A      + + G   +  +   +L  +C      EA  
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +L  +      L    +  LI G   +   ++A  L+D M    + P    Y ++ +   
Sbjct: 104 VLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDI 360
           ++ ++  A DM   +L  GM  D      +I  FC EG++E AL    +M  ++  + D 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER----------- 409
                ++ GL   G ++  L+ +   I +G   D+ TYN +I   CK +           
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKD 283

Query: 410 -RLEDAFGLLSEMEEKKLGPDRYTYAAI-------------HTALVESGRLEEAQKFTSI 455
            +L +A  L  +M E  L PD   + +I               AL    +L+   K   +
Sbjct: 284 GKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLLEL 343

Query: 456 MVETGKINHQVVQPNTSKTPEEID-----PSSISYSEKINEHCSQGR 497
               G  ++  +Q       +EI      P +I  +  I   CS+GR
Sbjct: 344 SSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGR 390



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 96/207 (46%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G +PD   YN +++ L +  K+++   LLS M + G++PN  TY IL++   +LG 
Sbjct: 690 LEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGD 749

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+++ + +  +  + D  TYN  I G   AG ++EA      M     +P   +Y+ 
Sbjct: 750 INHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDK 809

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+             +L +++   G  P    +  ++    K+G+  +A +I   M +  
Sbjct: 810 LMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKR 869

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRM 207
              D  T   L +   K G ++ AF M
Sbjct: 870 KYLDKKTKKCLEELCYKQGELDLAFEM 896


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 231/459 (50%), Gaps = 18/459 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VT+NT+++     G+++    +L+ + K G  P+  T   L+ G C  G + EA+  
Sbjct: 81  PSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHF 140

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            D +       +  +Y +LING C  G    A ++ ++++   +  +VV Y+T+I+   +
Sbjct: 141 HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCK 200

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                EA++L  ++    + P+ VT + +I  +C  G+  +A  +   M     +PD  T
Sbjct: 201 EKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           +N L+DA CK G+ +E   ++ VM ++  ++N                  +A  + N   
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVN------------------KAKHVFNIIG 302

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           KR    D  SY  +I    + +  + AL L++EM+ + I P   TY+++I GL +S +  
Sbjct: 303 KRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERIS 362

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A ++L+++   G   D  T+ + +H  C   QV+KA+    K+ ++  +P+I T NIL+
Sbjct: 363 HAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILI 422

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            GLC+EG  E A   F+  ++KG  V   TYN +I+ LC E   ++A  LL +ME+    
Sbjct: 423 DGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCT 482

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
           PD  TY  I  AL ++    +A+K    M+  G +  +V
Sbjct: 483 PDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 202/403 (50%), Gaps = 17/403 (4%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T  T++  L   GK++E       +  +G   N  +Y IL++G CK+G  + A
Sbjct: 113 GYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAA 172

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++V+  +       +V  Y+ +I+  C   ++ EA+ L  +M   K+ PDVVT++ LI  
Sbjct: 173 LQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYG 232

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG-----------------KID 167
           F   G+  EAF L  E+    I P+  T NI++   CKEG                 +++
Sbjct: 233 FCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVN 292

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           KA  +   + +   +PD  +Y  +I   CK   ++EA  + + M  KG+  + +T ++++
Sbjct: 293 KAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLI 352

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC  +++  A+ LL+    RG   D ++Y + +    ++ + ++A+ L  ++K++ I 
Sbjct: 353 DGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQ 412

Query: 288 PSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF 347
           P+  TYN +I GL + G+ E A  +  +LL  G      T+N +I+G C EG  ++A+  
Sbjct: 413 PNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTL 472

Query: 348 HNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
             KM +    PD+VT   ++  L +     KA K  R  I +G
Sbjct: 473 LEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 210/434 (48%), Gaps = 36/434 (8%)

Query: 113 PDVVTYNTLINRFFESGRSME--AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           P ++ +N ++    +S  +    A  L   L  + I P+ VT N +I  YC  G++D A 
Sbjct: 44  PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
            ++  + + G+ PD +T  TLI   C  G + EA    D +  +G ++N ++   +++ L
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGL 163

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   +   A  +L     +    + V Y T+I    +++    A +L+ +M  +++ P  
Sbjct: 164 CKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDV 223

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG----------- 339
            T++A+I+G    G+ ++A  + +E++ + + PD  TFN ++   C EG           
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283

Query: 340 ------QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
                 QV KA    N + ++   PD+ +  I++  LC+  ++++AL  F     KG   
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           D VTY++LI  LCK  R+  A+ LL +M  +    D  TY +   AL ++ ++++A    
Sbjct: 344 DKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALV 403

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
                  KI  Q +QPN +           +Y+  I+  C +GR+++A  IF++   KG 
Sbjct: 404 K------KIKDQGIQPNIN-----------TYNILIDGLCKEGRFENAQVIFQDLLIKGY 446

Query: 514 AINKSTYMNLMNGL 527
            +   TY  ++NGL
Sbjct: 447 KVTVWTYNIMINGL 460



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 169/376 (44%), Gaps = 37/376 (9%)

Query: 182 SPDCVTYNTLIDANCKAGN--MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           SP  + +N ++ +  K+ N     A  +   +    +  + +T NT+++  C   ++D A
Sbjct: 43  SPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFA 102

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + +L    K GY+ D ++  TLI G   + K + AL   D +  R    +  +Y  +I G
Sbjct: 103 FSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILING 162

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + G+T  A+ +L ++    +  +   ++TII   C E  V +A + +++M+ K   PD
Sbjct: 163 LCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPD 222

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           +VT + L+ G C  G  ++A   F   +L     D  T+N L+ +LCKE   ++   +L+
Sbjct: 223 VVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLA 282

Query: 420 EMEE-----------------KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            M +                 +++ PD ++Y  I   L +   ++EA    + M   G  
Sbjct: 283 VMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKG-- 340

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          I P  ++YS  I+  C   R   A ++ ++   +G   +  TY +
Sbjct: 341 ---------------ITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTS 385

Query: 523 LMNGLIKRRKSISKAV 538
            ++ L K  + + KAV
Sbjct: 386 FLHALCKNHQ-VDKAV 400



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G   D +TY + L AL K  ++++   L+  +K QG+ PN  TYNIL+ G CK G 
Sbjct: 371 MHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGR 430

Query: 61  LKEAMRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            + A  +  DL+ +   +  VWTYN++ING C  G+ +EA  L ++ME     PDVVTY 
Sbjct: 431 FENAQVIFQDLLIKGYKVT-VWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYE 489

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGI 146
           T+I   F++  + +A KL+ E+   G+
Sbjct: 490 TIIRALFKNDENHKAEKLLREMIARGL 516



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRT 46
           ME  GC PD VTY TI+ ALFK  + ++   LL +M  +GL+  + 
Sbjct: 476 MEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521


>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
 gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 246/529 (46%), Gaps = 26/529 (4%)

Query: 21  FKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDV 80
           F+ G++     +  +M  +G  PN   +N ++ G C  G ++ +  ++ +M +   +PD 
Sbjct: 202 FRGGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDA 261

Query: 81  WTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDE 140
            +YN+L+ G C  G  E+AF L  EM      P +VTYN L+N     GR +EA  L DE
Sbjct: 262 CSYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDE 321

Query: 141 LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
           + + G++ N +T N++I  Y K G+++ A      M+  G  PDC T+N L     K G 
Sbjct: 322 MLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFG- 380

Query: 201 MEEAFRMMD---VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            + A  ++D   +    G +++T  ++ ++  LC + +LD+A+ LL SA ++G  +    
Sbjct: 381 -KAALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSG 439

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           +  LI  Y ++     A +L+  M +  + PS+ T N +I GL   G+ +QA   L  ++
Sbjct: 440 FNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMV 499

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G      +F   +      G V  AL+  + M     +PD V  +  ++GLCR   L+
Sbjct: 500 RMGYCV-IASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLD 558

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +A   F   I +G   ++ TYN+LIS+ C+   + +A  L  +M +  L PD +T   + 
Sbjct: 559 EAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILI 618

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------------------SKTPEEI 478
                 G L  A      M   G +   VV  NT                       +  
Sbjct: 619 DGFCREGGLNTANNLFFGMYSIG-LTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGC 677

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +P   +Y+  ++  CS      A+ + +E      A N  TY  LM+G+
Sbjct: 678 EPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGI 726



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 224/478 (46%), Gaps = 42/478 (8%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P  VTYN +++ L ++G++ E R L  +M + G+  N  T+N+L+ GY K G ++ A
Sbjct: 291 GCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGYAKAGQMENA 350

Query: 65  MRVVDLMTQNKSLPDVWTYN------------------------------------MLIN 88
                 M     +PD  T+N                                    MLI 
Sbjct: 351 NMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFGSQLSTDGIDMLIC 410

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
             C  G L++A+ L        +   V  +N LI  + + G   EAF+L   +++ G+ P
Sbjct: 411 RLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAP 470

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV--TYNTLIDANCKAGNMEEAFR 206
           ++ T N +I   C  G++D+A   +  M   G+   CV  ++   +D++ +AG++  A +
Sbjct: 471 SSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGY---CVIASFTIYLDSSFRAGDVLGALK 527

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
             D M   GL+ + +  +  ++ LC    LDEAY       +RG   +  +Y +LI+ + 
Sbjct: 528 CWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFC 587

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           R    + ALKL  +M++  ++P  FT N +I G  + G    A ++   +   G+ PD  
Sbjct: 588 RAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVV 647

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+NT+++ +C    +  A+ F NKM+    +PDI T NI +  LC   +L +A+      
Sbjct: 648 TYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDEL 707

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                A +SVTYNTL+  +C +  L+ A  L   + +    P+  T   + +   ++G
Sbjct: 708 AATDCAPNSVTYNTLMDGICSD-VLDRAMILTGRLIKLAFQPNTVTINILFSHFCKNG 764



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 182/357 (50%), Gaps = 2/357 (0%)

Query: 24  GKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY 83
           G+L++  +LL    ++G+  + + +N L++ Y K G+ +EA  +   M +    P   T 
Sbjct: 416 GRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTL 475

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N LI G CN G L++A RL  E         + ++   ++  F +G  + A K  D++  
Sbjct: 476 NYLIMGLCNRGRLDQA-RLFLEYMVRMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKI 534

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G++P+ V  +  +   C+   +D+A      M   G  P+  TYN+LI A C+AGN+ E
Sbjct: 535 VGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSE 594

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A ++   M + GL  +  T N ++   C E  L+ A  L       G   D V+Y T++ 
Sbjct: 595 ALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLN 654

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
            Y R +  N A+   ++M      P  FTYN  +  L  +    +A+ +L+EL  +   P
Sbjct: 655 AYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAP 714

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
           +  T+NT++ G CS+  +++A+    ++++ +F+P+ VT NIL S  C+ G  ++AL
Sbjct: 715 NSVTYNTLMDGICSD-VLDRAMILTGRLIKLAFQPNTVTINILFSHFCKNGFGKRAL 770



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 2/354 (0%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           +N ++ A  K+G   E  +L   M K GL P+ +T N L+ G C  G L +A   ++ M 
Sbjct: 440 FNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMV 499

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
           +      + ++ + ++    AG +  A +   +M+ + L PD V ++  +N         
Sbjct: 500 R-MGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLD 558

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA+    E+   G+ PN  T+N +I  +C+ G + +A K+ + M ++G  PD  T N LI
Sbjct: 559 EAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILI 618

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D  C+ G +  A  +   M   GL  + +T NT+L+  C  K ++ A + +N     G  
Sbjct: 619 DGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCE 678

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            D  +Y   +     +   NRA+ L DE+      P++ TYN ++ G+  S   ++A+ +
Sbjct: 679 PDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGIC-SDVLDRAMIL 737

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
              L++    P+  T N +   FC  G  ++AL +  K+ + SF  D  T NIL
Sbjct: 738 TGRLIKLAFQPNTVTINILFSHFCKNGFGKRALVWAEKLRDDSFNFDDATRNIL 791



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/524 (22%), Positives = 205/524 (39%), Gaps = 88/524 (16%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           + ++ +  AGM +EA  +   +      P +     L+   F  G    A+K+ +E+   
Sbjct: 161 LALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAAR 220

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G +PN    N MI   C  G +  +  ++  M      PD  +YN L+  +C  G  E+A
Sbjct: 221 GPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDA 280

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
           F + D M   G     +T N +++ LC E ++ EA ML +   + G  ++ +++  LI G
Sbjct: 281 FNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDG 340

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG------------------------- 299
           Y +  +   A     EMK   +MP   T+N +  G                         
Sbjct: 341 YAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFGSQL 400

Query: 300 -----------LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
                      L   G+ + A ++L   ++ G+    + FN +I  +  EG  E+A + +
Sbjct: 401 STDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELY 460

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV--------------- 393
             M +    P   T N L+ GLC  G L++A  F    +  G  V               
Sbjct: 461 KTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCVIASFTIYLDSSFRAG 520

Query: 394 -------------------DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
                              D V ++  ++ LC+   L++A+    EM  + L P+ +TY 
Sbjct: 521 DVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYN 580

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
           ++ +A   +G + EA K    M ++G +                 P   + +  I+  C 
Sbjct: 581 SLISAFCRAGNVSEALKLEQKMRQSGLV-----------------PDIFTRNILIDGFCR 623

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
           +G    A  +F      G+  +  TY  ++N    R K I+ A+
Sbjct: 624 EGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYC-RSKDINGAM 666



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 129/231 (55%), Gaps = 1/231 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD V ++  ++ L +   L+E  +   +M ++GLVPN  TYN L+S +C+ G 
Sbjct: 532 MKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGN 591

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+++   M Q+  +PD++T N+LI+G+C  G L  A  L   M S+ L PDVVTYNT
Sbjct: 592 VSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNT 651

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++N +  S     A   ++++   G +P+  T+NI +   C    +++A  ++  +    
Sbjct: 652 MLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATD 711

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLC 231
            +P+ VTYNTL+D  C +  ++ A  +   + +   + NT+T+N +    C
Sbjct: 712 CAPNSVTYNTLMDGIC-SDVLDRAMILTGRLIKLAFQPNTVTINILFSHFC 761



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 1/289 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
            ++   LD+ F+ G +        DMK  GL P+   ++  V+G C+L +L EA      
Sbjct: 507 ASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIE 566

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +   +P+ +TYN LI+ +C AG + EA +L ++M    L+PD+ T N LI+ F   G 
Sbjct: 567 MIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGG 626

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A  L   +   G+ P+ VT+N M+  YC+   I+ A   +  M  +G  PD  TYN 
Sbjct: 627 LNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNI 686

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
            + + C    +  A  ++D +       N++T NT++  +C +  LD A +L     K  
Sbjct: 687 WMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICSD-VLDRAMILTGRLIKLA 745

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           +  + V+   L + + ++    RAL   +++++        T N + W 
Sbjct: 746 FQPNTVTINILFSHFCKNGFGKRALVWAEKLRDDSFNFDDATRNILDWA 794


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 245/493 (49%), Gaps = 18/493 (3%)

Query: 20  LFKKGKLNE-VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP 78
           L  + +L++  R ++  M ++G+      +  L+  Y + G L+ AMRV+ LM ++   P
Sbjct: 135 LLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAP 194

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
           D+   NM +N    AG +++A    + M  + + PDVVTYN LI     + R ++A ++I
Sbjct: 195 DICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMI 254

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
             + ++G  P+ +++  ++ + CKE ++     ++  M + G  PD VTYN LI    K 
Sbjct: 255 SSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKH 314

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G+ +EA   +     K  +++ +  +  +H+ C   ++ EA  ++     +G   D V+Y
Sbjct: 315 GHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTY 374

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             ++ G+ R  + ++A K+   M +    P+T T+ A++ GL + GK+ +A ++LN+  +
Sbjct: 375 SAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEE 434

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
               P   T++ ++HGF  EG+++++     +M++K F P  V  N+L+  LC E     
Sbjct: 435 EWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPAD 494

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A  F      KG  ++ V + T+I    ++  LE A  LL +M      PD  TY  +  
Sbjct: 495 AKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVD 554

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
           AL   G+++EA      M+  G                 + P+ ++Y   I+ +C +G  
Sbjct: 555 ALGRKGKMKEATSLVEKMLNRG-----------------LHPTPVTYRTVIHRYCEKGAV 597

Query: 499 KDALQIFEETRQK 511
           +D L + ++   K
Sbjct: 598 EDLLNLLDKMLAK 610



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 226/460 (49%), Gaps = 2/460 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD    N  ++ L   G++++  +    M++ G+ P+  TYN L+ G C    
Sbjct: 187 MQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARR 246

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ ++  M QN  LPD  +Y  +++  C    + +   L + M    + PD VTYN 
Sbjct: 247 IVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNM 306

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G + EA   + E +    + + V ++  +  +C  G++ +A +I+  M   G
Sbjct: 307 LIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKG 366

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD VTY+ ++D  C+ G +++A +MM  M + G K NT+T   +L+ LC   K  EA+
Sbjct: 367 CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAW 426

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LLN + +  +    ++Y  ++ G+ R+ K   +  +  +M ++   P+T   N +I  L
Sbjct: 427 ELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHAL 486

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
               K   A D + +    G   +   F T+IHGF  +G +E AL   + M   +  PD+
Sbjct: 487 CNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDV 546

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           VT  +++  L R+G +++A       + +G     VTY T+I   C++  +ED   LL +
Sbjct: 547 VTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDK 606

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           M  K+       Y  +   L   G+L EA    S ++ T 
Sbjct: 607 MLAKEGFSS--AYNQVIEKLCAFGKLSEANNLLSKVLRTA 644



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 212/462 (45%), Gaps = 17/462 (3%)

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A RV+ LM +         +  L+  +  AG L  A R+ + M+     PD+   N  +N
Sbjct: 145 ARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVN 204

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               +GR  +A +  + +   G+ P+ VT+N +IK  C   +I  A +++ +M +NG  P
Sbjct: 205 VLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLP 264

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D ++Y T++   CK   + +   +++ M   G+  + +T N ++H L      DEA   L
Sbjct: 265 DKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFL 324

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
             +  + + +DEV Y   +  +  + +   A ++  EM  +   P   TY+A++ G  + 
Sbjct: 325 RESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRI 384

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ +QA  M+  + ++G  P+  T   +++G C  G+  +A +  NK  E+ + P  +T 
Sbjct: 385 GELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITY 444

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           ++++ G  REG L+++       + KG    +V  N LI +LC ER+  DA   + + + 
Sbjct: 445 SVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQS 504

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           K    +   +  +       G LE A      M  T +                  P  +
Sbjct: 505 KGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNR-----------------HPDVV 547

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
           +Y+  ++    +G+ K+A  + E+   +G+     TY  +++
Sbjct: 548 TYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIH 589



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 188/371 (50%), Gaps = 17/371 (4%)

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           Y + GK+  A ++++ M+++G +PD    N  ++    AG +++A    + M R G+  +
Sbjct: 171 YSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPD 230

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T N ++  LC  +++ +A  +++S  + G   D++SY T+++   ++++      L +
Sbjct: 231 VVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLE 290

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
            M +  I P   TYN +I GL++ G  ++A+  L E        DE  ++  +H FC  G
Sbjct: 291 RMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNG 350

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           ++ +A +   +M+ K  +PD+VT + ++ G CR G L++A K  +     G   ++VT+ 
Sbjct: 351 RMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHT 410

Query: 400 TLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
            L++ LCK  +  +A+ LL++ EE+   P   TY+ +       G+L+E+      M++ 
Sbjct: 411 ALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQK 470

Query: 460 GKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKST 519
           G                   P+++  +  I+  C++ +  DA    E+ + KG  IN   
Sbjct: 471 GFF-----------------PTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVN 513

Query: 520 YMNLMNGLIKR 530
           +  +++G  ++
Sbjct: 514 FTTVIHGFSRQ 524



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 158/338 (46%), Gaps = 18/338 (5%)

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A R+M +M R+G+   T     ++ +     KL  A  +L    K G   D       
Sbjct: 143 DPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMA 202

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           +       + ++AL+  + M+   + P   TYN +I GL  + +   A++M++ +LQ+G 
Sbjct: 203 VNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGC 262

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
           +PD+ ++ T++   C E +V        +M +    PD VT N+L+ GL + G  ++AL 
Sbjct: 263 LPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALS 322

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
           F R    K   VD V Y+  + S C   R+ +A  ++ EM  K   PD  TY+A+     
Sbjct: 323 FLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFC 382

Query: 442 ESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDA 501
             G L++A+K    M + G       +PNT           ++++  +N  C  G+  +A
Sbjct: 383 RIGELDQARKMMKHMYKNG------CKPNT-----------VTHTALLNGLCKVGKSSEA 425

Query: 502 LQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++  ++ ++    +  TY  +M+G  +R   + ++ D
Sbjct: 426 WELLNKSEEEWWTPSAITYSVVMHGF-RREGKLKESCD 462



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 18/256 (7%)

Query: 292 TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKM 351
            ++ M+  LS++   + A  ++  +++ GM      F  ++  +   G++  A++    M
Sbjct: 128 VFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLM 187

Query: 352 VEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            +    PDI  CN+ ++ L   G ++KAL+F       G   D VTYN LI  LC  RR+
Sbjct: 188 QKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRI 247

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVV 467
            DA  ++S M +    PD+ +Y  + + L +  R+ + Q     M + G    ++ + ++
Sbjct: 248 VDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNML 307

Query: 468 QPNTSKTPEEIDPSS--------------ISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
               +K     +  S              + YS  ++  C  GR  +A +I  E   KG 
Sbjct: 308 IHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGC 367

Query: 514 AINKSTYMNLMNGLIK 529
             +  TY  +++G  +
Sbjct: 368 RPDVVTYSAVVDGFCR 383



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 4/191 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  V  N ++ AL  + K  + +D +   + +G   N   +  ++ G+ + G L+ A
Sbjct: 471 GFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESA 530

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M      PDV TY ++++     G ++EA  L ++M +  L P  VTY T+I+R
Sbjct: 531 LSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHR 590

Query: 125 FFESGRSMEAFKLIDE-LDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
           + E G   +   L+D+ L + G    +  +N +I+  C  GK+ +A  ++  +       
Sbjct: 591 YCEKGAVEDLLNLLDKMLAKEGF---SSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKR 647

Query: 184 DCVTYNTLIDA 194
           D  T + L+D+
Sbjct: 648 DAQTCHILMDS 658



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G  P  VTY T++    +KG + ++ +LL  M  K+G     + YN ++   C  G L E
Sbjct: 576 GLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGF---SSAYNQVIEKLCAFGKLSE 632

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  ++  + +  S  D  T ++L++ + N G+  +++ +   M    L+PD+     + +
Sbjct: 633 ANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLCQKVDS 692

Query: 124 RFFESGRSMEAFKLIDELDEHGI 146
           +   +G    A KLI +  E G+
Sbjct: 693 QLALAGEKQAAGKLIIKFVERGV 715



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           +L  L R  + + A +  R  I +G    +  +  L+ S  +  +L  A  +L  M++  
Sbjct: 132 MLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDG 191

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             PD          LV +GR+++A +F   M   G                 +DP  ++Y
Sbjct: 192 CAPDICICNMAVNVLVVAGRIDKALEFAERMRRVG-----------------VDPDVVTY 234

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  I   C   R  DAL++     Q G   +K +Y  +M+ L K ++
Sbjct: 235 NCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKR 281


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 229/448 (51%), Gaps = 1/448 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           + Y +I++A  K   L++     ++M  +GLV     +N L+    +    ++A    + 
Sbjct: 94  LLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNE 153

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           + +     DV+++ ++I G C  G L+++F+L   ++ + L P+VV Y TLI+   ++G 
Sbjct: 154 LKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGD 212

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A    D++ E G+  N  T  ++I    K+G       +   M+ NG  P+  TYN 
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNC 272

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L++  C  G +  AF + D M  +G++ N +T NT++  +C E+++ EA  L++   K  
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAA 332

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              + ++Y TLI G+      ++A  L D++K   + PS  TYN +I G S++G  +   
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVA 392

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           D+  E+   G+ P + T   +I  +    ++EKA Q ++ M +    PD+    +L+ GL
Sbjct: 393 DLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGL 452

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           C +G ++++ K FRS          V YNT+I   CKE     A  LL EME K L P+ 
Sbjct: 453 CMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNV 512

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVE 458
            +Y++I   L + G+ EEA+     M+E
Sbjct: 513 ASYSSIIGVLCKDGKWEEAEVLLDKMIE 540



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 191/366 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++  G  P+ V Y T++D   K G +   R     M + GLV N+ T+ +L++G  K G 
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+   + + M  N   P+++TYN L+N +C  G +  AF L  EM    +  +VVTYNT
Sbjct: 248 KKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNT 307

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI       R  EA KL+D++ +  + PN +T+N +I  +C  G +DKA  ++  ++ NG
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            SP  VTYN LI+   KAGN +    +   M  +G+  + +T   ++      +++++A+
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +S  K G   D   YG LI G         + KL+  M E  + PS   YN MI G 
Sbjct: 428 QIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY 487

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +   + +A+ +L E+   G++P+  ++++II   C +G+ E+A    +KM+E   KP  
Sbjct: 488 CKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSA 547

Query: 361 VTCNIL 366
              N++
Sbjct: 548 SILNMI 553



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 213/416 (51%), Gaps = 1/416 (0%)

Query: 13  YNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMT 72
           +N++L +L +     +     +++K++ +  +  ++ I++ G C+ G L ++ +++ L+ 
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                P+V  Y  LI+G C  G +E A     +M  + L+ +  T+  LIN  F+ G   
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           + F L +++  +G+ PN  T+N ++  YC EGKI +A  +   M E G   + VTYNTLI
Sbjct: 250 DGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLI 309

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C+   + EA +++D M +  +  N IT NT++   C    LD+A  LL+     G  
Sbjct: 310 GGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLS 369

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
              V+Y  LI GY +         L  EM+ R I PS  T   +I    +  + E+A  +
Sbjct: 370 PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
            + + + G++PD   +  +IHG C +G ++++ +    M E   +P  V  N ++ G C+
Sbjct: 430 YSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCK 489

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           E    +AL+  R    KG   +  +Y+++I  LCK+ + E+A  LL +M E +L P
Sbjct: 490 EDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKP 545



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 224/462 (48%), Gaps = 22/462 (4%)

Query: 73  QNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYNTLINRFFESGR 130
           QN S+     Y  +IN    + +L++A     EM  + L   P++  +N+L+     S  
Sbjct: 86  QNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNC 143

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A+   +EL E  +K +  +  IMIK  C+ G +DK+ +++  +++ G SP+ V Y T
Sbjct: 144 FEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTT 202

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           LID  CK G++E A    D MG  GL  N  T   +++ L  +    + + L       G
Sbjct: 203 LIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKING 262

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            + +  +Y  L+  Y  + K  RA  L+DEM+ER +  +  TYN +I G+ +  +  +A 
Sbjct: 263 LFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAE 322

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +++++ ++ + P+  T+NT+I GFC  G ++KA    +++      P +VT NIL+ G 
Sbjct: 323 KLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGY 382

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
            + G  +      R    +G +   VT   LI +  + + +E AF + S ME+  L PD 
Sbjct: 383 SKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDV 442

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           Y Y  +   L   G ++E+ K    M E                   ++PS + Y+  I+
Sbjct: 443 YVYGVLIHGLCMKGNMKESSKLFRSMGEM-----------------HVEPSDVIYNTMIH 485

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            +C +     AL++  E   KG+  N ++Y +++  L K  K
Sbjct: 486 GYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK 527



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 194/371 (52%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  ++  ++    + G L++   LL  ++  GL PN   Y  L+ G CK G ++ A    
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF 220

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           D M +   + + +T+ +LING    G+ ++ F L ++M+   L P++ TYN L+N +   
Sbjct: 221 DKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGE 280

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G+   AF L DE+ E G++ N VT+N +I   C+E ++ +A K+V  M++   SP+ +TY
Sbjct: 281 GKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITY 340

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           NTLI   C  GN+++A  ++D +   GL  + +T N ++              L      
Sbjct: 341 NTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEG 400

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           RG    +V+   LI  Y R ++  +A +++  M++  ++P  + Y  +I GL   G  ++
Sbjct: 401 RGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKE 460

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           +  +   + +  + P +  +NT+IHG+C E    +AL+   +M  K   P++ + + ++ 
Sbjct: 461 SSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIG 520

Query: 369 GLCREGILEKA 379
            LC++G  E+A
Sbjct: 521 VLCKDGKWEEA 531



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 104/190 (54%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  VTYN +++   K G    V DL  +M+ +G+ P++ T  +L+  Y +L  +++A
Sbjct: 367 GLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKA 426

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++   M +   +PDV+ Y +LI+G C  G ++E+ +L + M  + + P  V YNT+I+ 
Sbjct: 427 FQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHG 486

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           + +   S  A +L+ E++  G+ PN  +++ +I   CK+GK ++A  ++  M E    P 
Sbjct: 487 YCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546

Query: 185 CVTYNTLIDA 194
               N +  A
Sbjct: 547 ASILNMISKA 556



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 88/158 (55%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           MEG G  P  VT   ++DA  +  ++ +   + S M+K GLVP+   Y +L+ G C  G 
Sbjct: 398 MEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGN 457

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +KE+ ++   M +    P    YN +I+G+C       A RL +EME+  L+P+V +Y++
Sbjct: 458 MKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSS 517

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK 158
           +I    + G+  EA  L+D++ E  +KP+A   N++ K
Sbjct: 518 IIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISK 555


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 237/455 (52%), Gaps = 12/455 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD   Y+ +    FK+G  ++   LL +M   G+ PN   Y I +   C+   ++EA
Sbjct: 228 GLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEA 287

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            ++ +LM  +  +P+++TY+ +I+G+C  G L +A+ L KE+   +LLP+VV + TL++ 
Sbjct: 288 EKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDG 347

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++   + A  L   + + G+ PN   +N +I   CK G + +A  ++  ME    SPD
Sbjct: 348 FCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPD 407

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  LI+  C    + EA R+   M  + +  +++T N+++H  C E  +++A  L +
Sbjct: 408 VFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCS 467

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             +  G   + +++ TLI GY +      A+ L+ EM  + I+P   TY  +I    +  
Sbjct: 468 EMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEA 527

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH---------NKMVEKS 355
             ++A+ + +++L++G+ P++ TF  ++ GF  EG++  A+ F+           +V++S
Sbjct: 528 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRS 587

Query: 356 -FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
            +K    TC  L+ GLC+ G + +A +FF      G   D  +Y +++ +  +E+R+ D 
Sbjct: 588 CWKYVGFTC--LIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDT 645

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
             L  +M +  + P+      +     E+G L  A
Sbjct: 646 MMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSA 680



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 234/488 (47%), Gaps = 16/488 (3%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
            +++L+  + ++G  ++A+ V   M   +  PD      ++NG       +  +   + M
Sbjct: 168 VFSLLIMEFLEMGLFEDALWVSREM---RCSPDSKACLAILNGLVRRRRFDSVWVDYQLM 224

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
            S  L+PDV  Y+ L    F+ G   +  KL+DE+   G+KPN   + I I+  C+E K+
Sbjct: 225 ISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKM 284

Query: 167 DKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTI 226
           ++A K+   M+ +G  P+  TY+ +ID  CK GN+ +A+ +   +    L  N +   T+
Sbjct: 285 EEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTL 344

Query: 227 LHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI 286
           +   C  ++L  A  L     K G   +   Y  LI G  +      A+ L  EM+   +
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNL 404

Query: 287 MPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQ 346
            P  FTY  +I GL    +  +A  +   +    + P   T+N++IHGFC E  +EKAL 
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALD 464

Query: 347 FHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLC 406
             ++M     +P+I+T + L+ G C+   ++ A+  +    +KG   D VTY TLI +  
Sbjct: 465 LCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHF 524

Query: 407 KERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT--SIMVETGKINH 464
           KE  +++A  L S+M E  + P+ +T+A +     + GRL +A  F   +    TGK   
Sbjct: 525 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGK--- 581

Query: 465 QVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLM 524
            +VQ +  K         + ++  I   C  G    A + F + +  G+  +  +Y++++
Sbjct: 582 SIVQRSCWKY--------VGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSML 633

Query: 525 NGLIKRRK 532
              ++ ++
Sbjct: 634 KAHLREKR 641



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 230/470 (48%), Gaps = 8/470 (1%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD+     IL+ L ++ + + V      M  +GLVP+   Y++L     K G+  +  
Sbjct: 194 CSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKE 253

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           +++D MT     P+V+ Y + I   C    +EEA ++ + M+   ++P++ TY+ +I+ +
Sbjct: 254 KLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGY 313

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++G   +A+ L  E+    + PN V    ++  +CK  ++  A  +  +M + G  P+ 
Sbjct: 314 CKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNL 373

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             YN LI   CK+GNM EA  ++  M    L  +  T   +++ LC E++L EA  L   
Sbjct: 374 YVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQR 433

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                 +   V+Y +LI G+ ++    +AL L  EM    + P+  T++ +I G  +   
Sbjct: 434 MKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRN 493

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ +  E+   G++PD  T+ T+I     E  +++AL+ ++ M+E    P+  T   
Sbjct: 494 IKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 553

Query: 366 LLSGLCREGILEKALKFF--RSWILKGKAV------DSVTYNTLISSLCKERRLEDAFGL 417
           L+ G  +EG L  A+ F+   +    GK++        V +  LI  LC+   +  A   
Sbjct: 554 LVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRF 613

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVV 467
            S+M+   + PD ++Y ++  A +   R+ +       M++TG + + +V
Sbjct: 614 FSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV 663



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 185/381 (48%), Gaps = 8/381 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+   Y   +  L ++ K+ E   +   MK  G+VPN  TY+ ++ GYCK G 
Sbjct: 259 MTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGN 318

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L++A  +   +   + LP+V  +  L++G+C A  L  A  L   M    + P++  YN 
Sbjct: 319 LRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNC 378

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   +SG  +EA  L+ E++   + P+  T+ I+I   C E ++ +A ++ + M+   
Sbjct: 379 LIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNER 438

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYN+LI   CK  N+E+A  +   M   G++ N IT +T++   C  + +  A 
Sbjct: 439 IFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAM 498

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L    + +G   D V+Y TLI  +F++     AL+L+ +M E  I P+  T+  ++ G 
Sbjct: 499 GLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 558

Query: 301 SQSGKTEQAIDML---NELLQSGMIPDETT-----FNTIIHGFCSEGQVEKALQFHNKMV 352
            + G+   AID     N+      I   +      F  +I G C  G + +A +F + M 
Sbjct: 559 WKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMK 618

Query: 353 EKSFKPDIVTCNILLSGLCRE 373
                PDI +   +L    RE
Sbjct: 619 SGGVTPDIWSYVSMLKAHLRE 639



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 14/177 (7%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VTY T++DA FK+  + E   L SDM + G+ PN  T+  LV G+ K G L +A
Sbjct: 508 GIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDA 567

Query: 65  MRVVDLMTQN------KSLP--DVWTY---NMLINGWCNAGMLEEAFRLRKEMESLKLLP 113
              +D   +N      KS+     W Y     LI G C  G +  A R   +M+S  + P
Sbjct: 568 ---IDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTP 624

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           D+ +Y +++       R  +   L  ++ + GI PN + + ++  +Y + G +  AC
Sbjct: 625 DIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSAC 681



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 90/430 (20%), Positives = 153/430 (35%), Gaps = 108/430 (25%)

Query: 193 DANCKAGNMEEAFRMMDV--MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS----- 245
           +A  K  + EEAFR+ +   + R     +  + + ++H L    K   A  L+ S     
Sbjct: 80  EAILKCRSAEEAFRLFETSSISRLSKTTDLQSFSAVIHVLTGAHKYTLARCLIKSLIERL 139

Query: 246 --------ASKRGY-YLDEVSYGTLITGYFR--------------------------DEK 270
                    S R +  L+++       G F                           D K
Sbjct: 140 RRYSEPTNISHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRCSPDSK 199

Query: 271 ANRAL-----------KLWDE---MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           A  A+            +W +   M  R ++P    Y+ +     + G   +   +L+E+
Sbjct: 200 ACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEM 259

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G+ P+   +   I   C E ++E+A +    M      P++ T + ++ G C+ G L
Sbjct: 260 TSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNL 319

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE------------------------ 412
            +A   ++  ++     + V + TL+   CK R L                         
Sbjct: 320 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCL 379

Query: 413 -----------DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGK 461
                      +A GLLSEME   L PD +TY  +   L    RL EA +    M     
Sbjct: 380 IHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRM----- 434

Query: 462 INHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                         E I PSS++Y+  I+  C +   + AL +  E    G+  N  T+ 
Sbjct: 435 ------------KNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFS 482

Query: 522 NLMNGLIKRR 531
            L++G  K R
Sbjct: 483 TLIDGYCKVR 492



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 20/209 (9%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
            F+ +I  F   G  E AL    +M      PD   C  +L+GL R    +     ++  
Sbjct: 168 VFSLLIMEFLEMGLFEDALWVSREM---RCSPDSKACLAILNGLVRRRRFDSVWVDYQLM 224

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           I +G   D   Y+ L     K+        LL EM    + P+ Y Y      L    ++
Sbjct: 225 ISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKM 284

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           EEA+K    M E  KI H VV            P+  +YS  I+ +C  G  + A  +++
Sbjct: 285 EEAEK----MFELMKI-HGVV------------PNLYTYSAMIDGYCKTGNLRQAYGLYK 327

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSIS 535
           E     +  N   +  L++G  K R+ ++
Sbjct: 328 EILVAELLPNVVVFGTLVDGFCKARELVA 356


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 249/492 (50%), Gaps = 34/492 (6%)

Query: 2   EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
           +G  C PD V+Y+T+++  FK+G L+++ D       Q + PN  TYN +++  CK   +
Sbjct: 80  DGGDCPPDVVSYSTVINGFFKEGDLDKMLD-------QRISPNVVTYNSIIAALCKAQTV 132

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            +AM V+  M ++  +PD  TYN +++G+C++G  +EA    K+M S  + PDVVTYN+L
Sbjct: 133 DKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSL 192

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           ++   ++GR  EA K+ D + + G+KP+  T+  +++ Y  +G + +   ++  M  NG 
Sbjct: 193 MDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 252

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            P+   ++ L+ A  K   +EEA  +   M ++GL  N +T  T++  LC   ++++A +
Sbjct: 253 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAML 312

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
                   G   D + Y +LI      +K  +A +L+ EM +R I  ST  +N++I    
Sbjct: 313 YFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHC 372

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNT-----------------IIHGFCSEGQVEKA 344
           + G+  ++  + + +++ G+ PD  T                    I     + G  EK 
Sbjct: 373 KEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKE 432

Query: 345 LQFH----NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
              +    N     S  P + T NI+L GLC+  + + AL+ F++  L    +++ T+N 
Sbjct: 433 TPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 492

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSI---- 455
           +I +L K  R ++A  L        L P+ +TY  +   ++  G LEE  Q F S+    
Sbjct: 493 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 552

Query: 456 -MVETGKINHQV 466
             V++G +N  V
Sbjct: 553 CTVDSGMLNFIV 564



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 242/479 (50%), Gaps = 24/479 (5%)

Query: 62  KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM--ESLKLLPDVVTYN 119
           ++A  V D + + + +PDV++YN+L+NG C+    +EA  L   M  +     PDVV+Y+
Sbjct: 34  EDARHVFDELLR-RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN FF+ G        +D++ +  I PN VT+N +I   CK   +DKA +++  M ++
Sbjct: 93  TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PDC+TYN+++   C +G  +EA   +  M   G++ + +T N+++  LC   +  EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + +S +KRG   D  +YGTL+ GY           L D M    I P+ + ++ ++  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
            ++  K E+A+ + +++ Q G+ P+  T+ T+I   C  G+VE A+ +  +M+++  +PD
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +  N L+  LC     EKA + F   + +G  + ++ +N++I S CKE R+ ++  L  
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI------MVETG-KINHQVVQPNTS 472
            M    + PD  T        + S R  +   F +I      M  TG K     V  N  
Sbjct: 386 LMVRIGVKPDIITLG----RFLGSAR-RDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGG 440

Query: 473 KTPEEID--PSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            T       P   +Y+  ++  C      DAL++F+      + +   T+  +++ L+K
Sbjct: 441 NTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 499



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 257/554 (46%), Gaps = 48/554 (8%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQG--LVPNRTTYNILVSGYCKLGWLKEA 64
           +PD  +YN +L+ L  + +  E  +LL  M   G    P+  +Y+ +++G+ K G L   
Sbjct: 48  IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL--- 104

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
               D M   +  P+V TYN +I   C A  +++A  +   M    ++PD +TYN++++ 
Sbjct: 105 ----DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  SG+  EA   + ++   G++P+ VT+N ++ + CK G+  +A KI  +M + G  PD
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY TL+      G + E   ++D+M R G+  N    + ++     ++K++EA ++ +
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              ++G   + V+YGT+I    +  +   A+  +++M +  + P +  YN++I  L    
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
           K E+A ++  E+L  G+      FN+II   C EG+V ++ +  + MV    KPDI+T  
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400

Query: 365 ILLSGLCREGILEKALKF-FRSWILKGK--------------AVDSV------TYNTLIS 403
             L    R+  L   + F F +    G               A +S       TYN ++ 
Sbjct: 401 RFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILH 460

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            LCK +  +DA  +   +    L  +  T+  +  AL++ GR +EA+         G + 
Sbjct: 461 GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV- 519

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                           P+  +Y         QG  ++  Q+F      G  ++ S  +N 
Sbjct: 520 ----------------PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD-SGMLNF 562

Query: 524 MNGLIKRRKSISKA 537
           +   + +R  I++A
Sbjct: 563 IVRELLQRGEITRA 576



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 213/453 (47%), Gaps = 17/453 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD VTYN+++D L K G+  E R +   M K+GL P+ TTY  L+ GY   G 
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L E   ++DLM +N   P+ + +++L+  +     +EEA  +  +M    L P+ VTY T
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +I+   +SGR  +A    +++ + G++P+++ +N +I   C   K +KA ++   M + G
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL-DEA 239
                + +N++ID++CK G + E+ ++ D+M R G+K + ITL   L +   +  L    
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNI 416

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           Y +  + S  G    E    T           N A             P   TYN ++ G
Sbjct: 417 YFIFTNMSNTGDKEKETPVNT--------NGGNTA-------SNSSGGPFLGTYNIILHG 461

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L ++  T+ A+ M   L    +  +  TFN +I      G+ ++A             P+
Sbjct: 462 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 521

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T  ++   +  +G+LE+  + F S    G  VDS   N ++  L +   +  A   LS
Sbjct: 522 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 581

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKF 452
            ++EK    +  T A++   L+  G+ +E   F
Sbjct: 582 MIDEKHFSLEAST-ASLFIDLLSGGKYQEYHIF 613


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 253/547 (46%), Gaps = 39/547 (7%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C+P+ VTY T+L    KK +    + +++ M  +G  PN + +N LV GYC  G    A 
Sbjct: 302 CIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAY 361

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWC------NAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           ++ + MT   S P    YN+ I   C      NA +L+   ++ +EM +   + + V   
Sbjct: 362 KLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTA 421

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
                    G+  +AF+++ E+   G  P+  T+  +I + C+  K++K+  + + M+  
Sbjct: 422 NFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA 481

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G +PD  TY  LID+ CKAG +E+A    D M   G   N +T   +LH     K+L +A
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQA 541

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM----------------KE 283
           + + +       Y + V+Y  LI G  +  +  +A ++++++                  
Sbjct: 542 HDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDT 601

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
             I P+  TY A+I GL ++ K   A ++L+ +L +G  P++  ++ +I GFC  G+++ 
Sbjct: 602 CTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDN 661

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +   +M +  + P + T   L+  + ++G L+ A+K     +      + VTY  +I 
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMID 721

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
            L K   +E A  LLS MEEK   P+  TY A+   L ++G+ + + K    M   G   
Sbjct: 722 GLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG--- 778

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                           P+ ++Y   IN  C+ G   +A  + +E +      +   Y   
Sbjct: 779 --------------CAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCA 824

Query: 524 MNGLIKR 530
           + G  K+
Sbjct: 825 VQGFSKK 831



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/587 (26%), Positives = 271/587 (46%), Gaps = 69/587 (11%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKL--NEVRDLLS----DMKKQGLVPNRTTYNILVSG 54
           M   G  P  V YN  + ++  + +L   E+ DL+     +M     V N+         
Sbjct: 367 MTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRC 426

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            C +G  ++A +++  M +   +PD  TY  +I   C A  +E++F L +EM+   + PD
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           V TY  LI+ F ++G   +A    DE+   G  PN VT+  ++  Y K  ++ +A  I  
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD-VMGRKG---------------LKM 218
            M +    P+ VTY+ LID  CKAG +++A  + + ++G  G               +  
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAP 606

Query: 219 NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW 278
           N +T   ++  LC  +K+ +A+ LL++    G   +++ Y  LI G+ +  K + A +++
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666

Query: 279 DEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
             M +   +PS  TY ++I  + + G+ + A+ +L+E+L     P+  T+  +I G    
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKV 726

Query: 339 GQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTY 398
           G++EKAL   + M EK   P++VT   L+ GL + G  + +LK F+    KG A + VTY
Sbjct: 727 GEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTY 786

Query: 399 NTLISSLCKERRLEDA---------------------------------FGLLSEMEEKK 425
             LI+  C    L++A                                  GLL EME  +
Sbjct: 787 RVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHE 846

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
             P    Y  +  +  ++GRLE A +    +VE        V  + + T      S+  Y
Sbjct: 847 TVPIAPVYGMLIDSFSKAGRLETALELHKELVE--------VSSSLNMT------STGMY 892

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +  I   C   + ++A  ++ E  +KGI  +   +++L+ GLI+  K
Sbjct: 893 ASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNK 939



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/575 (24%), Positives = 256/575 (44%), Gaps = 47/575 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++ FG  P  VTYN ++  L   G++     +  +M   G   +R+T        CK+G 
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGR 254

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A+ +++   ++ +L  V    M I+G   A +  EA      M     +P+VVTY T
Sbjct: 255 WADALNMLE--KEDFNLDTVLCTQM-ISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRT 311

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L++ F +  +     ++I+ +   G  PN    N ++  YC  G    A K+   M   G
Sbjct: 312 LLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCG 371

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDV-------MGRKGLKMNTITLNTILHTLCCE 233
             P  V YN  I + C    +  A  ++D+       M      +N +        LC  
Sbjct: 372 SPPGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGV 430

Query: 234 KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            K ++A+ +L    ++G+  D  +Y  +IT   + +K  ++  L+ EMK   + P  +TY
Sbjct: 431 GKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490

Query: 294 NAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVE 353
             +I    ++G  EQA    +E+   G  P+  T+  ++H +    Q+ +A    ++MV+
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVD 550

Query: 354 KSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS----------------VT 397
            +  P+ VT + L+ GLC+ G ++KA + +   I     V+S                VT
Sbjct: 551 AACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVT 610

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK------ 451
           Y  LI  LCK +++ DA  LL  M      P++  Y A+     + G+++ AQ+      
Sbjct: 611 YGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMT 670

Query: 452 ----------FTSI---MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
                     +TS+   M + G+++   ++  +    +  +P+ ++Y+  I+     G  
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLD-LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           + AL +     +KG + N  TY  L++GL K  K+
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKA 764



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 194/397 (48%), Gaps = 21/397 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLN---EVRDLL--------SDMKKQG-----LVPNRTTY 48
            C P+ VTY+ ++D L K G++    EV + L        SD   +G     + PN  TY
Sbjct: 552 ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611

Query: 49  NILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES 108
             L+ G CK   + +A  ++D M      P+   Y+ LI+G+C  G ++ A  +   M  
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671

Query: 109 LKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDK 168
              LP V TY +LI+R F+ GR   A K++ E+      PN VT+  MI    K G+I+K
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731

Query: 169 ACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
           A  ++  MEE G SP+ VTY  LID   K G  + + ++   M  KG   N +T   +++
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
             C    LDEA++LL+      +      Y   + G+   +K   +L L +EM+  + +P
Sbjct: 792 HCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVP 849

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT---FNTIIHGFCSEGQVEKAL 345
               Y  +I   S++G+ E A+++  EL++     + T+   + ++I   C   QVE+A 
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAF 909

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
             + +M  K   PD++    L+ GL      ++AL+ 
Sbjct: 910 TLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 225/468 (48%), Gaps = 21/468 (4%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD  TY  ++D+  K G + + R    +M+  G  PN  TY  L+  Y K   
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-------------- 106
           L +A  +   M      P+  TY+ LI+G C AG +++A  + +++              
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597

Query: 107 --ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEG 164
             ++  + P+VVTY  LI+   ++ +  +A +L+D +   G +PN + ++ +I  +CK G
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657

Query: 165 KIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN 224
           KID A ++   M + G+ P   TY +LID   K G ++ A +++  M       N +T  
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYT 717

Query: 225 TILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKER 284
            ++  L    ++++A  LL+   ++G   + V+Y  LI G  +  KA+ +LKL+ +M  +
Sbjct: 718 AMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777

Query: 285 QIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
              P+  TY  +I     +G  ++A  +L+E+  +        ++  + GF    +   +
Sbjct: 778 GCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIAS 835

Query: 345 LQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT---YNTL 401
           L    +M      P      +L+    + G LE AL+  +  +    +++  +   Y +L
Sbjct: 836 LGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASL 895

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           I +LC   ++E+AF L +EM  K + PD   + ++   L+E  + +EA
Sbjct: 896 IQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEA 943



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 187/454 (41%), Gaps = 78/454 (17%)

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
           N++++  C+ G  D+A + +  +++ G+ P  VTYN L+     AG +E  FR+   M  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
            G  M+  T+      LC   +  +A   LN   K  + LD V    +I+G       N 
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNE 289

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A+     M+    +P+  TY  ++ G  +  +      ++N ++  G  P+ + FN+++H
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE-------------------- 373
           G+C+ G    A +  N+M      P  V  NI +  +C +                    
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409

Query: 374 ---------------------GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
                                G  EKA +  +  + KG   D+ TY  +I+ LC+ +++E
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG----KINHQVVQ 468
            +F L  EM+   + PD YTY  +  +  ++G +E+A+ +   M   G     + +  + 
Sbjct: 470 KSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529

Query: 469 PNTSKTPEEID--------------PSSISYSEKINEHCSQGRYKDALQI---------- 504
               K+ + I               P++++YS  I+  C  G  + A ++          
Sbjct: 530 HAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGN 589

Query: 505 ------FEETRQKGIAINKSTYMNLMNGLIKRRK 532
                 FE      IA N  TY  L++GL K +K
Sbjct: 590 VESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQK 623


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 232/492 (47%), Gaps = 45/492 (9%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  TY  ++  L  +G++ +   +L +M  +  VP    Y++++   C+ G    A+RV
Sbjct: 114 PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRV 173

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFR-LRK---------------------- 104
           ++ +    S  D    N++IN  C+ G ++E    LRK                      
Sbjct: 174 LEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCA 233

Query: 105 ----------------------EMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD 142
                                 +M      PD+  Y T+I+   + G    A +++  + 
Sbjct: 234 AKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMP 293

Query: 143 EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNME 202
            +G+KPN V +N ++K  C   + +KA +++  M +     D VT+N L+D  C+ G ++
Sbjct: 294 SYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVD 353

Query: 203 EAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
               +++ M   G   + IT  T+++  C E  +DEA MLL +    G   + +SY  ++
Sbjct: 354 RVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVL 413

Query: 263 TGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMI 322
            G    E+   A +L   M ++  +P+  T+N +I  L + G  EQAI++L ++L +G  
Sbjct: 414 KGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCN 473

Query: 323 PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKF 382
           PD  +++T+I G    G+ E+AL+  N M+ K   P+++T + +   L REG ++K ++ 
Sbjct: 474 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQM 533

Query: 383 FRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVE 442
           F +        D+V YN +ISSLCK R  + A   L+ M      P+  TY A+   L  
Sbjct: 534 FDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLAS 593

Query: 443 SGRLEEAQKFTS 454
            G L EAQ   S
Sbjct: 594 EGLLCEAQDLLS 605



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 240/513 (46%), Gaps = 30/513 (5%)

Query: 31  DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGW 90
           D +  +   G       YN +V+GYC++G ++ A R   L       P+ +TY  ++ G 
Sbjct: 70  DAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARR---LAAAVPVPPNAYTYFPVVRGL 126

Query: 91  CNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNA 150
           C  G + +A  +  EM S   +P    Y+ +I     SG    A ++++ L   G   + 
Sbjct: 127 CGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDT 186

Query: 151 VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA---GNMEE---- 203
              N++I   C +G +D+  +++R +   G   D V+YN ++   C A   G++EE    
Sbjct: 187 GNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDE 246

Query: 204 ---AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
                  +  M + G   +     TI+  +C E   + A  +L+     G   + V Y T
Sbjct: 247 MVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNT 306

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           ++ G    ++  +A +L  EM ++       T+N ++    Q+G  ++ I++L ++L+ G
Sbjct: 307 VLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 366

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
            +PD  T+ T+I+GFC EG +++A+     M     KP+ ++  I+L GLC       A 
Sbjct: 367 CMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAE 426

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +     I +G   + VT+NT+I+ LCK+  +E A  LL +M      PD  +Y+ +   L
Sbjct: 427 ELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGL 486

Query: 441 VESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKD 500
            ++G+ EEA +  ++M+  G                 I P+ I+YS        +GR   
Sbjct: 487 GKAGKTEEALELLNVMINKG-----------------ITPNVITYSSMAFALAREGRIDK 529

Query: 501 ALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            +Q+F+  +   I  +   Y  +++ L KRR++
Sbjct: 530 VIQMFDNIQDATIRSDAVLYNAVISSLCKRRET 562



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 223/427 (52%), Gaps = 10/427 (2%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYC---KLGWLKEAM 65
           D    N +++A+  +G ++E  ++L  +   G   +  +YN ++ G C   + G ++E M
Sbjct: 185 DTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELM 244

Query: 66  -------RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
                    +  M Q+   PD+  Y  +I+G C  G  E A  +   M S  L P+VV Y
Sbjct: 245 DEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCY 304

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           NT++     + R  +A +L+ E+ +     + VT NI++ ++C+ G +D+  +++  M E
Sbjct: 305 NTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 364

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G  PD +TY T+I+  CK G ++EA  ++  M   G K NTI+   +L  LC  ++  +
Sbjct: 365 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVD 424

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L++   ++G   + V++ T+I    +     +A++L  +M      P   +Y+ +I 
Sbjct: 425 AEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVID 484

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++GKTE+A+++LN ++  G+ P+  T++++      EG+++K +Q  + + + + + 
Sbjct: 485 GLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRS 544

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D V  N ++S LC+    + A+ F    +  G   +  TY  LI  L  E  L +A  LL
Sbjct: 545 DAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLL 604

Query: 419 SEMEEKK 425
           SE+  ++
Sbjct: 605 SELCSRR 611



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 191/355 (53%), Gaps = 2/355 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG- 59
           M   GC PD   Y TI+D + K+G      ++LS M   GL PN   YN ++ G C    
Sbjct: 257 MAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADR 316

Query: 60  WLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
           W K    + ++  +N  L DV T+N+L++ +C  G+++    L ++M     +PDV+TY 
Sbjct: 317 WEKAEELLTEMYQKNCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYT 375

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           T+IN F + G   EA  L+  +   G KPN +++ I++K  C   +   A +++  M + 
Sbjct: 376 TVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQ 435

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  P+ VT+NT+I+  CK G +E+A  ++  M   G   + I+ +T++  L    K +EA
Sbjct: 436 GCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEA 495

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             LLN    +G   + ++Y ++     R+ + ++ ++++D +++  I      YNA+I  
Sbjct: 496 LELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISS 555

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           L +  +T+ AID L  ++ +G +P+E+T+  +I G  SEG + +A    +++  +
Sbjct: 556 LCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 231/498 (46%), Gaps = 34/498 (6%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L+   C  G   +A+R +D       + D   YN ++ G+C  G +E A RL     ++ 
Sbjct: 58  LIRSLCVAGRTADAVRALDAAGNAAGVVD---YNAMVAGYCRVGQVEAARRLAA---AVP 111

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + P+  TY  ++      GR  +A  ++DE+      P    ++++I+  C+ G    A 
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           +++  +   G + D    N +I+A C  G ++E   M+  +   G + + ++ N +L  L
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231

Query: 231 CCEKK-------LDE---AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           C  K+       +DE    +  L+  ++ G   D   Y T+I G  ++     A ++   
Sbjct: 232 CAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M    + P+   YN ++ G+  + + E+A ++L E+ Q     D+ TFN ++  FC  G 
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           V++ ++   +M+E    PD++T   +++G C+EG++++A+   ++    G   ++++Y  
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           ++  LC   R  DA  L+S M ++   P+  T+  I   L + G +E+A +    M+  G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471

Query: 461 KINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTY 520
                             +P  ISYS  I+     G+ ++AL++      KGI  N  TY
Sbjct: 472 -----------------CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITY 514

Query: 521 MNLMNGLIKRRKSISKAV 538
            ++   L  R   I K +
Sbjct: 515 SSMAFAL-AREGRIDKVI 531



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 145/280 (51%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C  D+VT+N ++D   + G ++ V +LL  M + G +P+  TY  +++G+CK G + EA+
Sbjct: 332 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 391

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            ++  M      P+  +Y +++ G C+     +A  L   M     LP+ VT+NT+IN  
Sbjct: 392 MLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFL 451

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G   +A +L+ ++  +G  P+ ++++ +I    K GK ++A +++  M   G +P+ 
Sbjct: 452 CKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNV 511

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +TY+++  A  + G +++  +M D +    ++ + +  N ++ +LC  ++ D A   L  
Sbjct: 512 ITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAY 571

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
               G   +E +Y  LI G   +     A  L  E+  R+
Sbjct: 572 MVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRR 611


>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 224/453 (49%), Gaps = 9/453 (1%)

Query: 14  NTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQ 73
           N  + +L K G+L +   ++ D  + GL+P+  TYN L+S Y +   +  A  V+  M +
Sbjct: 11  NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70

Query: 74  NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSME 133
               PDV TYN LI       +L  +  L +EM    + PDV +YN+L++ FF+ G+  E
Sbjct: 71  AGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDE 130

Query: 134 AFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLID 193
           A ++  ++    + P++ T NIMI   C  G    A  + R ++  GF P+ VTYN LI+
Sbjct: 131 ANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILIN 190

Query: 194 ANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCC--EKKLDEAYMLLNSASKRGY 251
             CK+  +  A R++  +G  G   + IT  T++   CC   ++ ++ + + +    +GY
Sbjct: 191 GLCKSRKLNAARRILRELGESGNVPDAITYTTVMK--CCFRSRQFEQGFEIFSEMKSKGY 248

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D  SY  +I    +  +   A  + ++M    I     +YN ++    ++GK E    
Sbjct: 249 AFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYK 308

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L+E+ + G+  DE T   +I G C  G VE AL+    M +  F   +V  N ++ GLC
Sbjct: 309 LLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGLC 368

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           + G L+ A+K F S  +K    DS TY++++ +LCK RR   A  LL       +   R 
Sbjct: 369 KVGQLDHAIKMFASMEVK----DSFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILRA 424

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINH 464
              ++   L  SG   EA++  S  +   +I H
Sbjct: 425 NQRSVIDGLCYSGYTSEARRLKS-KIRLARILH 456



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 4/382 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD +TYN+++ A  K+  L+   DL  +M + G+ P+  +YN L+  + KLG 
Sbjct: 68  MKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGK 127

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA RV   +     LP   T+N++ING CN G    A  L + ++    +P++VTYN 
Sbjct: 128 PDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNI 187

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN   +S +   A +++ EL E G  P+A+T+  ++K   +  + ++  +I   M+  G
Sbjct: 188 LINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKG 247

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
           ++ D  +Y  +I A  K G +EEA  +M+ M R  + ++ ++ NT+++  C   KL+  Y
Sbjct: 248 YAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATY 307

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            LL+   + G   DE ++  LI G  +      AL+    M +     +    N +I GL
Sbjct: 308 KLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGL 367

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+ + AI M      S  + D  T+++++H  C   +   A +     +    K   
Sbjct: 368 CKVGQLDHAIKM----FASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILR 423

Query: 361 VTCNILLSGLCREGILEKALKF 382
                ++ GLC  G   +A + 
Sbjct: 424 ANQRSVIDGLCYSGYTSEARRL 445



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 175/341 (51%), Gaps = 17/341 (4%)

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
           N  I + CK G +E+A  ++    R GL  + +T NT+L        +D AY +++   +
Sbjct: 11  NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
            G   D ++Y +LI    +    +R+L L++EM    I P  ++YN+++    + GK ++
Sbjct: 71  AGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDE 130

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +  +++ + ++P  +TFN +I+G C+ G    AL  +  +  + F P++VT NIL++
Sbjct: 131 ANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILIN 190

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           GLC+   L  A +  R     G   D++TY T++    + R+ E  F + SEM+ K    
Sbjct: 191 GLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAF 250

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           D ++Y A+  AL ++GRLEEA      M  +                 +ID   +SY+  
Sbjct: 251 DAFSYCAVIAALTKTGRLEEANDIMEQMARS-----------------DIDLDIVSYNTV 293

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +N +C  G+ +   ++ +E  + G+  ++ T+  L++GL K
Sbjct: 294 MNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCK 334



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 17/244 (6%)

Query: 289 STFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           ST   N  I  L + G+ E+A  ++ + ++ G++PD  T+NT++  +     ++ A    
Sbjct: 6   STKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVI 65

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           ++M E    PD++T N L++   +  +L ++L  F   +  G   D  +YN+L+    K 
Sbjct: 66  HRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKL 125

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQ 468
            + ++A  +  ++    L P   T+  +   L  +G    A      +   G +      
Sbjct: 126 GKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFV------ 179

Query: 469 PNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLI 528
                      P  ++Y+  IN  C   +   A +I  E  + G   +  TY  +M    
Sbjct: 180 -----------PELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCF 228

Query: 529 KRRK 532
           + R+
Sbjct: 229 RSRQ 232


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 223/420 (53%), Gaps = 21/420 (5%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD  T N + + L    +++E    ++ + ++G +P+  TYN L+ G C++  +  A
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             ++                  I+G C  G  +EA  + +EM++  ++P+V++Y++L++ 
Sbjct: 65  TCII------------------IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F  +G+  E+ +L +E+ + G++PN V  N++I   CKEGK+ +A K++    + G   D
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
            VTYN+LID  CK G++  A ++   M  KG + N I+   +++  C   K++EA  L N
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 226

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   +  +Y TL+TG  +  K   A KL+  MK   I   +  Y   + GL ++G
Sbjct: 227 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNG 286

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
              +A+++ NEL       D  +++ +I G C  G+VE A +F  ++ ++  +P++VTCN
Sbjct: 287 VLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCN 346

Query: 365 ILLSGLCREGILEKALKFFRSWIL---KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
           I++ G CR   ++KA   F         G   D +TYNTL+   C+  +LE+   LL +M
Sbjct: 347 IMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 207/417 (49%), Gaps = 21/417 (5%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M   GL P+  T NIL +  C L  + E +  +  + +   +PD+ TYN LI G C    
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           +                   V    +I+   + G   EA ++ +E+   G+ PN ++++ 
Sbjct: 61  IS------------------VATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           ++  +C  GK++++ ++   M + G  P+ V +N LID  CK G + EA ++++V  ++G
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
           + ++ +T N+++   C    L  A  L  S   +G   +E+SY  LI GY +  K   A+
Sbjct: 163 IILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 222

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L++EM +    P+  TY+ ++ GL Q+GK   A  +   +  SG+  D   +   + G 
Sbjct: 223 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 282

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G + +A++  N++   +FK D  + + L+ GLC+ G +E A +FF+    +G   + 
Sbjct: 283 CKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNV 342

Query: 396 VTYNTLISSLCKERRLEDA---FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           VT N +I   C+  +++ A   F  + +MEE    PD  TY  +     ES +LEE 
Sbjct: 343 VTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEV 399



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 190/370 (51%), Gaps = 20/370 (5%)

Query: 5   GCLPDNVTYNT-----------------ILDALFKKGKLNEVRDLLSDMKKQGLVPNRTT 47
           G +PD VTYNT                 I+D L K G  +E +++  +MK QG++PN  +
Sbjct: 40  GYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVIS 99

Query: 48  YNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEME 107
           Y+ LV G+C  G L+E+ R+ + M      P++  +N+LI+  C  G + EA +L +   
Sbjct: 100 YSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTI 159

Query: 108 SLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKID 167
              ++ D+VTYN+LI+ F + G    A KL   +   G + N +++ I+I  YCK  K++
Sbjct: 160 QRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVE 219

Query: 168 KACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTIL 227
           +A  +   M + G  P+  TY+TL+    + G + +A ++  VM   G+ +++      L
Sbjct: 220 EAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFL 279

Query: 228 HTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM 287
             LC    L EA  L N      + LD  SY  LI G  +  K   A + + ++ +  + 
Sbjct: 280 DGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQ 339

Query: 288 PSTFTYNAMIWGLSQSGKTEQA---IDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKA 344
           P+  T N MI G  +  + ++A    + + ++ ++G  PD  T+NT++ GFC   ++E+ 
Sbjct: 340 PNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEV 399

Query: 345 LQFHNKMVEK 354
           +   +KM ++
Sbjct: 400 VNLLHKMFKR 409



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 171/321 (53%), Gaps = 3/321 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +P+ ++Y++++      GKL E + L ++M  QG+ PN   +N+L+   CK G 
Sbjct: 88  MKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGK 147

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA +++++  Q   + D+ TYN LI+G+C  G L  A +L   M S     + ++Y  
Sbjct: 148 VIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTI 207

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + +  +  EA  L +E+ + G +PN  T++ ++    + GK+  A K+   M+ +G
Sbjct: 208 LINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 267

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            S D   Y   +D  CK G + EA  + + +     K++  + + ++  LC   K++ A+
Sbjct: 268 ISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAW 327

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLW---DEMKERQIMPSTFTYNAMI 297
                 S+ G   + V+   +I G+ R E+ ++A  L+   ++M+E    P   TYN ++
Sbjct: 328 EFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLL 387

Query: 298 WGLSQSGKTEQAIDMLNELLQ 318
            G  +S K E+ +++L+++ +
Sbjct: 388 RGFCESNKLEEVVNLLHKMFK 408



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 171/366 (46%), Gaps = 24/366 (6%)

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M    L PD+ T N L N      R  E    +  +   G  P+ VT+N +IK  C+  +
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           I  A  I+                  ID  CK G+ +EA  + + M  +G+  N I+ ++
Sbjct: 61  ISVATCII------------------IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++H  CC  KL+E+  L N    +G   + V +  LI    ++ K   A KL +   +R 
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           I+    TYN++I G  + G    A  +   +   G   +E ++  +I+G+C   +VE+A+
Sbjct: 163 IILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 222

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
             +N+M +   +P++ T + LL+GL + G +  A K F      G +VDS  Y   +  L
Sbjct: 223 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 282

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK   L +A  L +E++      D  +Y+ +   L ++G++E A +F   + + G     
Sbjct: 283 CKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEG----- 337

Query: 466 VVQPNT 471
            +QPN 
Sbjct: 338 -LQPNV 342



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 35/211 (16%)

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
           +G+ PD  T N + +  C+  +V + L     ++ + + PDIVT N L+ GLCR   +  
Sbjct: 4   AGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRI-- 61

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
                           SV    +I  LCK    ++A  +  EM+ + + P+  +Y+++  
Sbjct: 62  ----------------SVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVH 105

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRY 498
               +G+LEE+++  + MV+ G      VQPN            + ++  I+  C +G+ 
Sbjct: 106 GFCCAGKLEESKRLFNEMVDQG------VQPNL-----------VQFNVLIDILCKEGKV 148

Query: 499 KDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            +A ++ E T Q+GI ++  TY +L++G  K
Sbjct: 149 IEAKKLLEVTIQRGIILDLVTYNSLIDGFCK 179



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 35/180 (19%)

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
              PD+ T NIL + LC    + + L      + +G   D VTYNTLI  LC+  R+  A
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
                                I   L + G  +EA++    M   G I            
Sbjct: 65  ------------------TCIIIDGLCKVGHEDEAKEIFEEMKAQGMI------------ 94

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
                P+ ISYS  ++  C  G+ +++ ++F E   +G+  N   +  L++ L K  K I
Sbjct: 95  -----PNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVI 149


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 192/370 (51%), Gaps = 4/370 (1%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G+ P    +N+L+  + +LG L  A +V D M ++   P V T+N LI+G C A  L+  
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQ-PTVVTFNTLISGMCRARDLDAV 239

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
             L KEM  + + PDV TY  LI  F  +GR   A K+ +E+ + G+ PNAV    +I  
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           +CKEG ++    + ++M   G  PD V YN L++  C+A N++ A  +++ M   GLK +
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
            +T  T++   C + KLD A  +    +++   LDEV+Y  LI+G  +  +   A ++  
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM E  + P   TY  +I    + G  +    +L E+   G  P   T+N I++G C  G
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYN 399
           Q++ A    + M+     PD +T NILL G C+ G +  + +   S   KG   D   Y 
Sbjct: 480 QMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYT 536

Query: 400 TLISSLCKER 409
           +LIS L K++
Sbjct: 537 SLISELAKKK 546



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 224/432 (51%), Gaps = 27/432 (6%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY----- 83
           V +L +    +GL+P+  +  +L     + G    A     LM++  S P+ +T+     
Sbjct: 122 VSELAAAYADEGLLPDACSLVLLA---LRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLL 178

Query: 84  -----------NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSM 132
                      N+L+  +   G L  A ++  EM    + P VVT+NTLI+    + R +
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRA-RDL 236

Query: 133 EAFK-LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
           +A   L  E+ + G+KP+  T+  +IK +C+ G+++ A K+   M + G +P+ V + TL
Sbjct: 237 DAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTL 296

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           IDA+CK GN+     +   M  +G+  + +  N +++ LC  + L  A  ++      G 
Sbjct: 297 IDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGL 356

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             D+V+Y TLI G  +D K + A+ +  +M E+++     TY A+I GLS++G+   A  
Sbjct: 357 KPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAER 416

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           +L E++++ + PD TT+  +I  FC +G V+   +   +M  K  KP +VT N++++GLC
Sbjct: 417 VLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLC 476

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDR 430
           + G ++ A     + +  G + D +TYN L+   CK  ++ ++     E+E  K + PD 
Sbjct: 477 KLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS----EELESSKGMVPDF 532

Query: 431 YTYAAIHTALVE 442
             Y ++ + L +
Sbjct: 533 AVYTSLISELAK 544



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 191/401 (47%), Gaps = 21/401 (5%)

Query: 133 EAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLI 192
           EA+    +L + G+ P     N++++ + + G++  A K+   M  +   P  VT+NTLI
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLI 227

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
              C+A +++    +   M   G+K +  T   ++   C   +++ A  + N     G  
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDM 312
            + V + TLI  + ++   N  + L+ +M+ R +MP    YNA++ GL ++   + A  +
Sbjct: 288 PNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESI 347

Query: 313 LNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCR 372
           + E+  +G+ PD+ T+ T+I G C +G+++ A+    KM EK    D VT   L+SGL +
Sbjct: 348 VEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSK 407

Query: 373 EGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYT 432
            G    A +  R  +      D+ TY  +I + C++  ++  F LL EM+ K   P   T
Sbjct: 408 AGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVT 467

Query: 433 YAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEH 492
           Y  I   L + G+++ A      M+  G                 + P  I+Y+  ++  
Sbjct: 468 YNVIMNGLCKLGQMKNADMLLHAMLNIG-----------------VSPDDITYNILLDGQ 510

Query: 493 CSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           C  G+  ++ ++      KG+  + + Y +L++ L K++ +
Sbjct: 511 CKHGKVANSEEL---ESSKGMVPDFAVYTSLISELAKKKPA 548



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 163/345 (47%), Gaps = 10/345 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  VT+NT++  + +   L+ V  L  +M   G+ P+  TY  L+ G+C+ G ++ A+++
Sbjct: 218 PTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + M      P+   +  LI+  C  G +     L ++M    ++PD+V YN L+N    
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCR 337

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +     A  +++E+   G+KP+ VT+  +I   CK+GK+D A  I + M E   S D VT
Sbjct: 338 ARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVT 397

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LI    KAG   +A R++  M    L+ +  T   ++   C +  +   + LL    
Sbjct: 398 YTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQ 457

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G     V+Y  ++ G  +  +   A  L   M    + P   TYN ++ G  + GK  
Sbjct: 458 NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVA 517

Query: 308 QAIDMLNELLQS--GMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
            +     E L+S  GM+PD   + ++I     +   + A  +H++
Sbjct: 518 NS-----EELESSKGMVPDFAVYTSLISELAKK---KPAKNYHDR 554



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 143/263 (54%), Gaps = 3/263 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P+ V + T++DA  K+G +N   DL  DM+ +G++P+   YN LV+G C+   
Sbjct: 281 MRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARN 340

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           LK A  +V+ M      PD  TY  LI+G C  G L+ A  ++++M   ++  D VTY  
Sbjct: 341 LKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTA 400

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   ++GR ++A +++ E+ E  ++P+  T+ ++I  +C++G +    K+++ M+  G
Sbjct: 401 LISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKG 460

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P  VTYN +++  CK G M+ A  ++  M   G+  + IT N +L   C   K+  + 
Sbjct: 461 KKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSE 520

Query: 241 MLLNSASKRGYYLDEVSYGTLIT 263
            L    S +G   D   Y +LI+
Sbjct: 521 EL---ESSKGMVPDFAVYTSLIS 540



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 151/302 (50%), Gaps = 3/302 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  PD  TY  ++    + G++     + ++M+  G+ PN   +  L+  +CK G 
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +   M +   M     +PD+  YN L+NG C A  L+ A  + +EM++  L PD VTY T
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTT 365

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+   + G+   A  +  ++ E  +  + VT+  +I    K G+   A +++R M E  
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD  TY  +IDA C+ G+++  F+++  M  KG K   +T N I++ LC   ++  A 
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNAD 485

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
           MLL++    G   D+++Y  L+ G  +  K   + +L      + ++P    Y ++I  L
Sbjct: 486 MLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELE---SSKGMVPDFAVYTSLISEL 542

Query: 301 SQ 302
           ++
Sbjct: 543 AK 544



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 21/302 (6%)

Query: 233 EKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFT 292
           E  L +A  L+  A +RG  L       L++   R      A   + ++ +  + P T  
Sbjct: 132 EGLLPDACSLVLLALRRGISLPAPVCSGLMS---RLPSTPEAYTFYLQLLDAGMAPETRL 188

Query: 293 YNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMV 352
           +N ++    + G+   A  + +E+ +S + P   TFNT+I G C    ++     + +M 
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMS 247

Query: 353 EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLE 412
           +   KPD+ T   L+ G CR G +E A+K F      G   ++V + TLI + CKE  + 
Sbjct: 248 DVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVN 307

Query: 413 DAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
               L  +M  + + PD   Y A+   L  +  L+ A+     M   G            
Sbjct: 308 AGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG------------ 355

Query: 473 KTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
                + P  ++Y+  I+  C  G+   A+ I ++  +K +++++ TY  L++GL K  +
Sbjct: 356 -----LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGR 410

Query: 533 SI 534
            +
Sbjct: 411 PV 412


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 206/386 (53%), Gaps = 9/386 (2%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEAM 65
           L DN TY  ++ A    G+L    DLL +M++Q G+ P  + YN  V   CK G + EAM
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            VV  M      PDV T+N LI G C AG L+EA ++  EME      ++VTYNTLIN  
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPD 184
             +GRS EA  ++  +      P+  T+N +I  +CK G+ID+A   +  M++  G SPD
Sbjct: 135 SSAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 185 CVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             TY+ LI+  CK+ N+ +A  ++ +++GRK    + +  NT++   C  + LD A  LL
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  + G   D V+Y T+I G  R    ++   L ++M  R   P   TY  ++ GL ++
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A  ++  +L+ G  P+  T++ +  G C   +++ A      + +K    D+V  
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371

Query: 364 NILLSGLCREGILEKALKFFRSWILK 389
             LL  + ++ +L++A   F+ W L+
Sbjct: 372 ETLLLSV-KKRLLDRAA--FQKWKLE 394



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 188/351 (53%), Gaps = 6/351 (1%)

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINRFFESGRSMEAF 135
           L D +TY +L+   C AG L+ A  L +EME    + P    YN  ++   +SG+  EA 
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           +++  + +   KP+ VT N +I   CK G++D+A +++  ME +GF+ + VTYNTLI+  
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR-GYYLD 254
             AG   EA  +M  M       +T T N I+H  C   ++D AY  L    +R G   D
Sbjct: 135 SSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWGLSQSGKTEQAIDML 313
             +Y  LI G  +     +A +L  EM  R+    S   +N ++ G  ++   ++A ++L
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           + +L+ G  PD  T++TII G C  G V+K      KMV +  KPD+VT  +L++GLC+ 
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           G + +A +  +  +  G   ++VTY+ +   LCK  +L+ A  LL+ + +K
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 188/358 (52%), Gaps = 6/358 (1%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L D  TY  L+     +G    A  L+ E+++  G+ P    +N  +   CK GK+ +A 
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           ++V+NM++    PD VT+NTLI   CKAG ++EA +++D M R G   N +T NT+++ L
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPS 289
               +  EA +++   +      D  +Y  +I G+ +  + +RA    +EMK+R    P 
Sbjct: 135 SSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           TFTY+ +I GL +S    +A ++L E++ +         FNT++ G+C    +++A +  
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           + M+E    PD+VT + ++ GLCR G ++K        + +G   D VTY  L++ LCK 
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
            ++ +A  L+  M E    P+  TY+ +   L +  +L+ A    + + + G++   V
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVV 369



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 193/371 (52%), Gaps = 7/371 (1%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKE 105
           TY +LV  +C  G L+ AM ++  M Q   + P    YN  ++  C +G + EA  + K 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           M+     PDVVT+NTLI    ++GR  EA +++DE++  G   N VT+N +I      G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM-GRKGLKMNTITLN 224
             +A  +++ M     +PD  TYN +I   CK+G ++ A+  ++ M  R G   +T T +
Sbjct: 140 SGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 225 TILHTLCCEKKLDEAYMLLNSA-SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
            +++ LC    L +A  LL     ++      V++ TL+ GY + +  +RA +L   M E
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
               P   TY+ +I GL + G  ++   +L +++  G  PD  T+  ++ G C  G++ +
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A +   +M+E    P+ VT +++  GLC+   L+ A     S   KG+  D V + TL+ 
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLL 376

Query: 404 SLCKERRLEDA 414
           S+ K+R L+ A
Sbjct: 377 SV-KKRLLDRA 386



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 169/330 (51%), Gaps = 5/330 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P    YN  + AL K GK+ E  +++ +MK     P+  T+N L++G CK G L EA
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+D M ++    ++ TYN LING  +AG   EA  +   M+ +   PD  TYN +I+ 
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---MQGMTTTPDTQTYNAIIHG 165

Query: 125 FFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFS 182
           F +SG    A+  ++E+ +  G  P+  T++I+I   CK   + KA ++++ M       
Sbjct: 166 FCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC 225

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
              V +NTL+D  CKA +++ A  ++  M   G   + +T +TI+  LC    +D+ + L
Sbjct: 226 ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L     RG   D V+Y  L+TG  +  K   A +L   M E    P+  TY+ +  GL +
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             K + A D+L  +   G + D   F T++
Sbjct: 346 IDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 148/299 (49%), Gaps = 40/299 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C PD VT+NT++  L K G+L+E + +L +M++ G   N  TYN L++G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
             EA+ V+  MT   + PD  TYN +I+G+C +G ++ A+   +EM +     PD  TY+
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 120 TLINRFFES--------------GR-----SMEAF-----------------KLIDELDE 143
            LIN   +S              GR     S+ AF                 +L+  + E
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
           HG  P+ VT++ +I   C+ G +DK   ++  M   G  PD VTY  L+   CKAG M E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLI 262
           A R++  M   G   N +T + +   LC   KLD A  LL S   +G   D V++ TL+
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 27/348 (7%)

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           TY  L+ A+C AG ++ A  ++  M ++ G+       N  +H LC   K+ EA  ++ +
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                   D V++ TLI G  +  + + A ++ DEM+      +  TYN +I GLS +G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 306 TEQAIDMLNELLQSGMI--PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVT 362
           + +A+     L+  GM   PD  T+N IIHGFC  G++++A  F  +M +++   PD  T
Sbjct: 140 SGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFT 194

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEM 421
            +IL++GLC+   L KA +  +  I +     SV  +NTL+   CK + L+ A  LLS M
Sbjct: 195 YSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E    PD  TY+ I   L   G +++       MV  G                   P 
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG-----------------CKPD 297

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            ++Y+  +   C  G+  +A ++ +   + G   N  TY  + +GL K
Sbjct: 298 VVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 128/232 (55%), Gaps = 2/232 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLG 59
           M+G    PD  TYN I+    K G+++     L +MK++ G  P+  TY+IL++G CK  
Sbjct: 147 MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206

Query: 60  WLKEAMRVVDLMTQNKSL-PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
            L++A  ++  M   K     V  +N L++G+C A  L+ A  L   M      PDVVTY
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           +T+I+     G   + F L++++   G KP+ VT+ +++   CK GK+ +AC++V+ M E
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           +G +P+ VTY+ + D  CK   ++ A  ++  +  KG   + +   T+L ++
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV 378



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 28/305 (9%)

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM-PSTFTYNAMIWGLSQSGKTEQAID 311
            D  +Y  L+  +    +   A+ L  EM+++  M P+   YN  +  L +SGK  +A++
Sbjct: 16  FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++  +      PD  TFNT+I G C  G++++A Q  ++M    F  ++VT N L++GL 
Sbjct: 76  VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 372 REGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGP 428
             G   +A+      +++G     D+ TYN +I   CK   ++ A+G L EM+++    P
Sbjct: 136 SAGRSGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSP 190

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----------------- 471
           D +TY+ +   L +S  L +A +    M+        VV  NT                 
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 472 --SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             S       P  ++YS  I+  C  G       + E+   +G   +  TY  L+ GL K
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 530 RRKSI 534
             K +
Sbjct: 311 AGKMV 315


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 187/346 (54%)

Query: 102 LRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYC 161
           + + M S+   PD+ TYNTLI    + G  + A +L++E+   G +PN +T+ I+I  +C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 162 KEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTI 221
           KEG++++A  ++  M   G + + V YN LI A CK   +++A  M   M  KG K +  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 222 TLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEM 281
           T N+++  LC   K +EA  L       G   + ++Y TLI  + R      ALKL ++M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 282 KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
             R       TYN +I  L ++G  E+ + +  +++  G+ P+  + N +I+G C  G +
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 342 EKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTL 401
           + AL+F   M+ +   PDIVT N L++GLC+ G  ++AL  F    ++G   D++TYNTL
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 402 ISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
           IS  CKE   +DA  LLS   +    P+  T+  + +  ++ G  E
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 180/331 (54%)

Query: 78  PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKL 137
           PD++TYN LI G C  G L  A  L  EM+     P+V+TY  LI+RF + GR  EA  +
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           +DE+   G+  NAV +N +I   CK+ K+  A  +  +M   G  PD  T+N+LI   CK
Sbjct: 72  LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
               EEA  +   M  +G+  NTIT NT++H       + EA  L+N    RG  LD+++
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  LI    R     + L L+++M  + + P+  + N +I GL ++G  + A++ L +++
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G+ PD  T+N++I+G C  G+ ++AL   +K+  +   PD +T N L+S  C+EG+ +
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 311

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
            A       +  G   + VT+  L+S+  KE
Sbjct: 312 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 342



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 180/322 (55%)

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
           G  P+  T+N +I   CK+G +  A +++  M+  G  P+ +TY  LID  CK G +EEA
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             ++D M  KGL +N +  N ++  LC ++K+ +A  +    S +G   D  ++ +LI G
Sbjct: 69  RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
             +  K   AL L+ +M    ++ +T TYN +I    + G  ++A+ ++N++L  G   D
Sbjct: 129 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 188

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
           + T+N +I   C  G +EK L     M+ K   P+ ++CNIL++GLCR G ++ AL+F R
Sbjct: 189 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 248

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
             I +G   D VTYN+LI+ LCK  R ++A  L  +++ + + PD  TY  + +   + G
Sbjct: 249 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 308

Query: 445 RLEEAQKFTSIMVETGKINHQV 466
             ++A    S  V++G I ++V
Sbjct: 309 MFDDAHLLLSRGVDSGFIPNEV 330



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 182/342 (53%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   GC PD  TYNT++  L KKG L   R+L+++M+ +G  PN  TY IL+  +CK G 
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA  V+D M+      +   YN LI+  C    +++A  +  +M S    PD+ T+N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  +  EA  L  ++   G+  N +T+N +I  + + G + +A K+V +M   G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D +TYN LI A C+AGN+E+   + + M  KGL  N I+ N +++ LC    +  A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             L     RG   D V+Y +LI G  +  +A  AL L+D+++   I P   TYN +I   
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
            + G  + A  +L+  + SG IP+E T+  ++  F  EG  E
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 183/351 (52%), Gaps = 19/351 (5%)

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD  TYNTLI   CK G +  A  +M+ M  KG + N IT   ++   C E +L+EA
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             +L+  S +G  L+ V Y  LI+   +DEK   AL ++ +M  +   P  FT+N++I+G
Sbjct: 69  RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  K E+A+ +  ++L  G+I +  T+NT+IH F   G +++AL+  N M+ +    D
Sbjct: 129 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 188

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
            +T N L+  LCR G +EK L  F   + KG   ++++ N LI+ LC+   ++ A   L 
Sbjct: 189 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 248

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKINHQVVQPNTSKTPEEI 478
           +M  + L PD  TY ++   L ++GR +EA   F  + VE                   I
Sbjct: 249 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG------------------I 290

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            P +I+Y+  I+ HC +G + DA  +       G   N+ T+  L++  IK
Sbjct: 291 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 341



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 177/339 (52%)

Query: 36  MKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGM 95
           M   G  P+  TYN L+ G CK G+L  A  +++ M      P+V TY +LI+ +C  G 
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           LEEA  +  EM    L  + V YN LI+   +  +  +A  +  ++   G KP+  T N 
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
           +I   CK  K ++A  + ++M   G   + +TYNTLI A  + G M+EA ++++ M  +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
             ++ IT N ++  LC    +++   L      +G   + +S   LI G  R      AL
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +   +M  R + P   TYN++I GL ++G+ ++A+++ ++L   G+ PD  T+NT+I   
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
           C EG  + A    ++ V+  F P+ VT  IL+S   +EG
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 17/319 (5%)

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
           M + M   G   +  T NT++  LC +  L  A  L+N    +G   + ++Y  LI  + 
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           ++ +   A  + DEM  + +  +   YN +I  L +  K + A++M  ++   G  PD  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           TFN++I G C   + E+AL  +  M+ +    + +T N L+    R G +++ALK     
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + +G  +D +TYN LI +LC+   +E    L  +M  K L P+  +   +   L  +G +
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           + A +F   M+  G                 + P  ++Y+  IN  C  GR ++AL +F+
Sbjct: 241 QHALEFLRDMIHRG-----------------LTPDIVTYNSLINGLCKTGRAQEALNLFD 283

Query: 507 ETRQKGIAINKSTYMNLMN 525
           + + +GI  +  TY  L++
Sbjct: 284 KLQVEGICPDAITYNTLIS 302



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 17/148 (11%)

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S +  G   D  TYNTLI  LCK+  L  A  L++EM+ K   P+  TY  +     + G
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           RLEEA+     M   G                 +  +++ Y+  I+  C   + +DAL +
Sbjct: 64  RLEEARNVLDEMSGKG-----------------LALNAVGYNCLISALCKDEKVQDALNM 106

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRK 532
           F +   KG   +  T+ +L+ GL K  K
Sbjct: 107 FGDMSSKGCKPDIFTFNSLIFGLCKVNK 134


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 199/368 (54%), Gaps = 3/368 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD + Y++++D L K G+++E R L+  M  +G  P    Y  +V+G CK G ++EA
Sbjct: 228 GYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEA 287

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           ++ +  M + +  P V TY+ ++ G+   G +E+AF + +EM      PD ++Y   I  
Sbjct: 288 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEA 347

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            +  GR  EA K+ + + E G KP+  T+ I+I  +CKEG +  A  ++R M++    P+
Sbjct: 348 LYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPN 407

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              Y  ++D   K+  +EEA  +   + + G+  +T+T NT+++ LC  KK+DEA  LL 
Sbjct: 408 RYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLR 467

Query: 245 SASKRGYYLDE--VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
              +R   L+   V+Y  +I G  +     RA  L  EM +  ++P  FTY ++I  L+ 
Sbjct: 468 EMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAG 527

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           +GK  +A+++L E+L++G+ PD+ T+ T++   C    V+ A     +M+     P+  T
Sbjct: 528 AGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEMMRNGHTPNEFT 586

Query: 363 CNILLSGL 370
              +  G 
Sbjct: 587 FKAVEKGF 594



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 223/438 (50%), Gaps = 2/438 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  ++N +L     +     V  LL +MK +G+  N  T+ +++S  C    L +A+  
Sbjct: 126 PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSY 185

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + ++ NK  P ++TY +L++G C A  +E A  + +EM      PD++ Y++LI+   +
Sbjct: 186 FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK 245

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +GR  EA KL+D +   G  P AV +  ++   CK G+I +A K ++ M      P   T
Sbjct: 246 AGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDT 305

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ ++      G +E+AF +M+ M  +    +TI+    +  L    + +EA  +  +  
Sbjct: 306 YSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMV 365

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           ++G   D  +YG +I  + ++     A  +   M +  + P+ + Y  ++ G  +S + E
Sbjct: 366 EKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLE 425

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK--SFKPDIVTCNI 365
           +A+++   +L+ G++P   T+NT+I+  C   ++++AL+   +M  +    +P IVT ++
Sbjct: 426 EALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSM 485

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ GL + G+ E+A       I  G   D  TY +LI +L    ++  A  LL EM +  
Sbjct: 486 IIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAG 545

Query: 426 LGPDRYTYAAIHTALVES 443
           + PD +TY  +   L  S
Sbjct: 546 IFPDDHTYGTLVQILCRS 563



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 231/494 (46%), Gaps = 22/494 (4%)

Query: 38  KQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           + G      T N L+    + G L +A+        + S P+V ++N+L+ G+      E
Sbjct: 89  RPGFSHTLFTRNSLLLALVRGGHLSDAL---GFFQSSISEPNVSSFNILLRGFAARDDFE 145

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
               L +EM+S  +  +  T+  +++         +A    + +  +  +P   T+ +++
Sbjct: 146 VVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLV 205

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
              CK  K+++AC +   M   G+ PD + Y++LID   KAG ++EA +++D+M  +G  
Sbjct: 206 DGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPP 265

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
              +   +I+  LC   ++ EA   +    +R       +Y  ++TGY    K  +A  +
Sbjct: 266 PTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAV 325

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
            +EM +R   P T +Y   I  L   G+ E+A  +   +++ G  PD  T+  II  FC 
Sbjct: 326 MEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCK 385

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
           EG +  A      M + + KP+     +++ G  +   LE+AL+ ++  +  G    +VT
Sbjct: 386 EGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVT 445

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKK--LGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           YNT+I++LCK +++++A  LL EM+ +K  L P   TY+ I   L + G  E A    + 
Sbjct: 446 YNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAE 505

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M++ G I                 P   +Y+  I      G+   A+++ EE  + GI  
Sbjct: 506 MIDNGVI-----------------PDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFP 548

Query: 516 NKSTYMNLMNGLIK 529
           +  TY  L+  L +
Sbjct: 549 DDHTYGTLVQILCR 562



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 209/438 (47%), Gaps = 3/438 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G   +  T+  IL AL  +  L++     + +      P   TY +LV G CK   
Sbjct: 154 MKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHK 213

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           ++ A  V + M +    PD+  Y+ LI+G   AG ++EA +L   M +    P  V Y +
Sbjct: 214 VERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTS 273

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++    + GR  EA K I E+    ++P   T++ ++  Y   GK++KA  ++  M +  
Sbjct: 274 IVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRD 333

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +PD ++Y   I+A    G  EEA ++ + M  KG K +  T   I+   C E  +  A 
Sbjct: 334 CAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAAT 393

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            +L    K     +   Y  ++ G+ +  +   AL+L+  + +  I+PST TYN +I  L
Sbjct: 394 HVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINAL 453

Query: 301 SQSGKTEQAIDMLNELLQSG--MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            +  K ++A+++L E+ +    + P   T++ IIHG    G  E+A     +M++    P
Sbjct: 454 CKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIP 513

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D  T   L+  L   G + +A++     +  G   D  TY TL+  LC+   ++ A+ LL
Sbjct: 514 DCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLL 572

Query: 419 SEMEEKKLGPDRYTYAAI 436
            EM      P+ +T+ A+
Sbjct: 573 QEMMRNGHTPNEFTFKAV 590


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 226/454 (49%), Gaps = 10/454 (2%)

Query: 17  LDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKS 76
           L+ L K GK  E    L  M K+G  P+      L+ G       ++A+RV++++ Q   
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
            PD + YN +I+G+C +   + A R+   M+     PDVVTYN LI      G+   A K
Sbjct: 144 -PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           ++D+L E    P  +T+ I+I+     G ID A +++  M   G  PD  TYN ++   C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           K G ++ AF  +  +       +    N +L  L  E + +    L++    +G   + V
Sbjct: 263 KRGLVDRAFEFVSNLNTTP---SLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +Y  LI+   RD KA  A+ +   MKE+ + P  + Y+ +I    + GK + AI  ++++
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM 379

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
           + +G +PD   +NTI+   C +G+ ++AL    K+ E    P+  + N +   L   G  
Sbjct: 380 ISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDK 439

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +AL      +  G   D +TYN+LISSLC++  +++A GLL +ME  +  P   +Y  +
Sbjct: 440 IRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIV 499

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPN 470
              L ++ R+ +A +  ++MV+ G       QPN
Sbjct: 500 LLGLCKAHRIVDAIEVLAVMVDNG------CQPN 527



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 226/472 (47%), Gaps = 21/472 (4%)

Query: 56  CKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDV 115
           CK G   EA+  ++ M +    PDV     LI G   +   E+A R+ + +E     PD 
Sbjct: 88  CKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD-PDS 146

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
             YN +I+ F  S R   A ++I  +   G  P+ VT+NI+I   C  GK+D A K++  
Sbjct: 147 FAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQ 206

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           + E+  +P  +TY  LI+A    G++++A R++D M  +GL+ +  T N I+  +C    
Sbjct: 207 LLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGL 266

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
           +D A+  +++ +              +    R E   R   L  +M  +   P+  TY+ 
Sbjct: 267 VDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGER---LMSDMIVKGCEPNIVTYSV 323

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS 355
           +I  L + GK  +A+D+L  + + G+ PD   ++ +I  FC EG+V+ A+ F + M+   
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383

Query: 356 FKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAF 415
           + PDIV  N ++  LC++G  ++AL  F+     G   ++ +YNT+  +L        A 
Sbjct: 384 WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRAL 443

Query: 416 GLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTP 475
            ++ EM    + PDR TY ++ ++L   G ++EA      M  T                
Sbjct: 444 TMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERT---------------- 487

Query: 476 EEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
            E  P+ ISY+  +   C   R  DA+++       G   N++TY  L+ G+
Sbjct: 488 -EWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 205/398 (51%), Gaps = 3/398 (0%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD+  YN ++    +  + +    ++  MK +G  P+  TYNIL+   C  G L  A++V
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D + ++   P V TY +LI      G +++A RL  EM S  L PD+ TYN ++    +
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G    AF+ +  L+     P+   +N+++K    EG+ +   +++ +M   G  P+ VT
Sbjct: 264 RGLVDRAFEFVSNLNT---TPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVT 320

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y+ LI + C+ G   EA  ++ VM  KGL  +    + ++   C E K+D A   ++   
Sbjct: 321 YSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMI 380

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
             G+  D V+Y T++    +  +A+ AL ++ +++E    P+  +YN M   L  SG   
Sbjct: 381 SAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKI 440

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+ M+ E+L +G+ PD  T+N++I   C +G V++A+     M    ++P +++ NI+L
Sbjct: 441 RALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVL 500

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
            GLC+   +  A++     +  G   +  TY  L+  +
Sbjct: 501 LGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 184/384 (47%), Gaps = 32/384 (8%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  PD VTYN ++ +L  +GKL+    ++  + +    P   TY IL+      G 
Sbjct: 172 MKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGS 231

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAF-------------------- 100
           + +AMR++D M      PD++TYN+++ G C  G+++ AF                    
Sbjct: 232 IDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLK 291

Query: 101 ------------RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
                       RL  +M      P++VTY+ LI+     G++ EA  ++  + E G+ P
Sbjct: 292 GLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNP 351

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           +A  ++ +I  +CKEGK+D A   V +M   G+ PD V YNT++ + CK G  +EA  + 
Sbjct: 352 DAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIF 411

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             +   G   N  + NT+   L        A  ++      G   D ++Y +LI+   RD
Sbjct: 412 KKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRD 471

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
              + A+ L  +M+  +  P+  +YN ++ GL ++ +   AI++L  ++ +G  P+ETT+
Sbjct: 472 GMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTY 531

Query: 329 NTIIHGFCSEGQVEKALQFHNKMV 352
             ++ G    G    A++    +V
Sbjct: 532 TLLVEGVGYAGWRSYAVELAKSLV 555



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 198/445 (44%), Gaps = 50/445 (11%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           +NR  ++G+  EA   ++++ + G KP+ +    +IK      + +KA +++  +E+ G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
            PD   YN +I   C++   + A R++  M  +G   + +T N ++ +LC   KLD A  
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
           +++   +       ++Y  LI         + A++L DEM  R + P  +TYN ++ G+ 
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 302 QSGKTEQAIDMLNEL---------------------------LQSGMI-----PDETTFN 329
           + G  ++A + ++ L                           L S MI     P+  T++
Sbjct: 263 KRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYS 322

Query: 330 TIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK 389
            +I   C +G+  +A+     M EK   PD    + L+S  C+EG ++ A+ F    I  
Sbjct: 323 VLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISA 382

Query: 390 GKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           G   D V YNT++ SLCK+ R ++A  +  ++EE    P+  +Y  +  AL  SG    A
Sbjct: 383 GWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRA 442

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
                 M+  G                 +DP  I+Y+  I+  C  G   +A+ +  +  
Sbjct: 443 LTMILEMLSNG-----------------VDPDRITYNSLISSLCRDGMVDEAIGLLVDME 485

Query: 510 QKGIAINKSTYMNLMNGLIKRRKSI 534
           +        +Y  ++ GL K  + +
Sbjct: 486 RTEWQPTVISYNIVLLGLCKAHRIV 510



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 4/155 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  GC P+  +YNT+  AL+  G       ++ +M   G+ P+R TYN L+S  C+ G 
Sbjct: 414 LEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGM 473

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + EA+ ++  M + +  P V +YN+++ G C A  + +A  +   M      P+  TY  
Sbjct: 474 VDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTL 533

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L+     +G    A +L   L    +  NA++ ++
Sbjct: 534 LVEGVGYAGWRSYAVELAKSL----VSMNAISQDL 564


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 221/453 (48%), Gaps = 6/453 (1%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           ++N +L  L K    ++V  L   M   GL P+  T NIL++  C +  + E +  +  +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
            +   +PDV T+  LI G C    + EA +L   M+ L   P+VVTY TLI      G  
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 132 MEAFKLIDELDE------HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
             A K   E+           +PN ++++I+I   CK G  ++A  +   M + G  P+ 
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           VT++ LID  CK G + +A +++++M + G+  N  T  +++   C    L+ A  L  S
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
              +GY  D +SY  LI GY +  K   A+KL++EM    + P   T   ++  L  +GK
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A ++   +    M  D       + G C  G + +A++  N++   + K DI T   
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L+ GLC+ G LE A + F     +G   D++ Y+++I   CK+ +++ A  L  +MEE  
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVE 458
             PD  TY+ +     ES +LE+  +    M+E
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIE 545



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 218/427 (51%), Gaps = 6/427 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +PD VT+ T++  L  + ++ E   L   M+K G  PN  TY  L+ G C LG +  A
Sbjct: 156 GYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIA 215

Query: 65  MRVVDLMTQNKSL------PDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTY 118
           ++    M  + S       P+V +Y+++I+G C  G  EEA  L  EM    + P+VVT+
Sbjct: 216 LKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTF 275

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + LI+   + G+ ++A KL++ + + GI PN  T+  +IK +C  G ++ A ++  +M  
Sbjct: 276 SVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPS 335

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G+ PD ++YN LI+  CK   +EEA ++ + M   G+  +  T   +L  L    K+D+
Sbjct: 336 KGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDD 395

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L           D       + G  ++     A+KL++E++   +     T+  +I 
Sbjct: 396 AKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLID 455

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++GK E A ++  +L + G+ PD   ++++IHGFC +GQV+KA     KM E    P
Sbjct: 456 GLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSP 515

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D++T +IL+ G      LEK ++     I K    D   Y  +   +CK+ + ++   LL
Sbjct: 516 DLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575

Query: 419 SEMEEKK 425
                +K
Sbjct: 576 QRFFVQK 582



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 224/450 (49%), Gaps = 6/450 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD +T N +++ L    ++NE    ++ + ++G +P+  T+  L+ G C    + EA
Sbjct: 121 GLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEA 180

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES------LKLLPDVVTY 118
            ++   M +    P+V TY  LI G C  G +  A +  +EM +          P+V++Y
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 119 NTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
           + +I+   + G   EA  L +E+ + G++PN VT +++I   CKEG++ KA K++  M +
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
            G  P+  TY +LI   C  G++  A  +   M  KG + + I+ N +++  C   K++E
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L N     G + D  + G L+   F   K + A +L+  +K   +          + 
Sbjct: 361 AMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLD 420

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL ++G   +A+ + NEL    M  D  TF  +I G C  G++E A +   K+ E+  +P
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           D +  + ++ G C++G ++KA   F+     G + D +TY+ L+    +  +LE    LL
Sbjct: 481 DAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLL 540

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
             M EK + PD   YA +   + +  + +E
Sbjct: 541 HRMIEKDVWPDDGIYAIVEDMVCKDEKYKE 570



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 203/420 (48%), Gaps = 6/420 (1%)

Query: 47  TYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
           ++N L++G  K+    +   +   M      PD+ T N+LIN  CN   + E       +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI 166
                +PDVVT+ TLI       R +EA KL   + + G  PN VT+  +IK  C  G I
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 167 DKACKIVRNMEEN------GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
           + A K  + M  +         P+ ++Y+ +ID  CK GN EEA  + + M  +G++ N 
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           +T + ++  LC E ++ +A  LL    + G   +  +Y +LI G+      N A +L+  
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           M  +   P   +YN +I G  ++ K E+A+ + NE+L  GM PD  T   ++      G+
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           V+ A +    +   +   D+  C I L GLC+ G + +A+K F         +D  T+  
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 401 LISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG 460
           LI  LCK  +LE A+ L  ++ E+ + PD   Y+++     + G++++A      M E G
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 232/503 (46%), Gaps = 37/503 (7%)

Query: 43  PNRTTYNILVSGY---CKLGWLK--EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLE 97
           P R ++   +  +   CK G +   +A +  DLM ++     ++++N L+ G        
Sbjct: 54  PERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMRS-----IFSFNRLLAGLAKIEHYS 108

Query: 98  EAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMI 157
           + F L K+M    L PD++T N LIN      R  E    +  +   G  P+ VT   +I
Sbjct: 109 QVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLI 168

Query: 158 KWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK--- 214
           K  C E +I +A K+   M++ G +P+ VTY TLI   C  GN+  A +    M      
Sbjct: 169 KGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSP 228

Query: 215 ---GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                + N I+ + I+  LC     +EA  L N    +G   + V++  LI    ++ + 
Sbjct: 229 YVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQV 288

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +A KL + M +  I+P+ FTY ++I G    G    A ++   +   G  PD  ++N +
Sbjct: 289 IKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNML 348

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G+C   +VE+A++  N+M+     PD+ T  +LL  L   G ++ A + FR  ++K  
Sbjct: 349 INGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR--VIKPY 406

Query: 392 AV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           A+  D       +  LCK   + +A  L +E+E   +  D  T+  +   L ++G+LE A
Sbjct: 407 AMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETA 466

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
            +    + E G                 I P +++YS  I+  C +G+   A  +F++  
Sbjct: 467 WELFEKLYEEG-----------------IQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509

Query: 510 QKGIAINKSTYMNLMNGLIKRRK 532
           + G + +  TY  LM G  +  K
Sbjct: 510 ENGCSPDLITYSILMRGFYESNK 532



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 178/335 (53%)

Query: 4   FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
           F C P+ ++Y+ I+D L K G   E   L ++M  QG+ PN  T+++L+   CK G + +
Sbjct: 231 FNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIK 290

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A +++++M Q   +P+++TY  LI G+C  G L  A  L   M S    PDV++YN LIN
Sbjct: 291 AKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLIN 350

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            + ++ +  EA KL +E+   G+ P+  T  +++K     GK+D A ++ R ++      
Sbjct: 351 GYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPK 410

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
           D       +D  CK G + EA ++ + +    +K++  T   ++  LC   KL+ A+ L 
Sbjct: 411 DLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELF 470

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
               + G   D ++Y ++I G+ +  + ++A  L+ +M+E    P   TY+ ++ G  +S
Sbjct: 471 EKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYES 530

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSE 338
            K E+ + +L+ +++  + PD+  +  +    C +
Sbjct: 531 NKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKD 565



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEV----RDLLSDMKKQ--GLVPNRTTYNILVSG 54
           M+  GC P+ VTY T++  L   G +N      +++L+D         PN  +Y+I++ G
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
            CK+G  +EA+ + + M      P+V T+++LI+  C  G + +A +L + M  + ++P+
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           + TY +LI  F   G    A +L   +   G +P+ +++N++I  YCK  K+++A K+  
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            M   G  PD  T   L+ A   AG +++A  +  V+    +  +       L  LC   
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNG 426

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
            + EA  L N        LD  ++G LI G  +  K   A +L++++ E  I P    Y+
Sbjct: 427 YIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYS 486

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
           +MI G  + G+ ++A  +  ++ ++G  PD  T++ ++ GF    ++EK +Q  ++M+EK
Sbjct: 487 SMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEK 546

Query: 355 SFKPD 359
              PD
Sbjct: 547 DVWPD 551



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 11/208 (5%)

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           +FN ++ G        +    + +M      PD++T NIL++ LC    + + L      
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           + +G   D VT+ TLI  LC E R+ +A  L   M++    P+  TY  +   L   G +
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
             A K+           HQ +  +TS       P+ ISYS  I+  C  G +++A+ +F 
Sbjct: 213 NIALKW-----------HQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFN 261

Query: 507 ETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           E   +G+  N  T+  L++ L K  + I
Sbjct: 262 EMVDQGVQPNVVTFSVLIDMLCKEGQVI 289


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 227/444 (51%), Gaps = 7/444 (1%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRT---TYNILVSGYCKLGWLKEAM 65
           +NV +   L  L K GK+ +  +    M++           T + ++   CK G +  A+
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL--KLLPDVVTYNTLIN 123
            +++ M +    PD+ T++MLIN  C A  ++EA    + M            +YN+L+N
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 124 RFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFS 182
              ++ +  +AF +   +  E  + P+ V+++I+I  +CK  ++ +A K+ + M +    
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           P+  TYN  ++   + G + +A  + + M   G   + IT +T++H     +K D+A+ L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
             +   RG   + V+Y  L+ G  ++ K + A +L+ +M ER   P   TY  +++G   
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            GK EQA+++ +E++  G  PD   +N ++ GF   G+  +A Q    MV +  KPD V+
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 363 CNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEM 421
            NI++ GL +   L+ A++ F R     G + D VTYN+LI  LC E+RL +A  +  E+
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429

Query: 422 EEKKLGPDRYTYAAIHTALVESGR 445
           +  KL PD + +  +  A+  +G 
Sbjct: 430 DRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 209/415 (50%), Gaps = 27/415 (6%)

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I + FE+ R+M+      +    G      T + +I+  CK G++D A  ++  M + G+
Sbjct: 27  IEQAFEACRTMQESLSSSQPPSSG------TCHSVIQELCKAGRVDSALSLLETMIKRGY 80

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR--KGLKMNTITLNTILHTLCCEKKLDEA 239
            PD  T++ LI+  CKA  ++EA   +  M R       +  + N++L++LC  KK+ +A
Sbjct: 81  CPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQA 140

Query: 240 YMLLNS-ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           + + ++  S+R    D VSY  LI G+ + ++  RA KL+ +M +   +P+  TYNA + 
Sbjct: 141 FAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 200

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           GL + G+   A  +  E++ +G  PD  T++T+IHGF    + ++A +    M+ +  +P
Sbjct: 201 GLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRP 260

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           + VT N LL GLC+E   ++A + FR  + +G   D VTY TL+   C   ++E A  + 
Sbjct: 261 NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVF 320

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
            EM  K   PD   Y  +      +G+  EA++   +MV                   E 
Sbjct: 321 DEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS-----------------REC 363

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQ-KGIAINKSTYMNLMNGLIKRRK 532
            P ++S++  I+      R  DA+++FE   Q  G + +  TY +L+ GL   ++
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 418



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 205/415 (49%), Gaps = 7/415 (1%)

Query: 44  NRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW---TYNMLINGWCNAGMLEEAF 100
           N   +   + G CK G +++A      M ++ S        T + +I   C AG ++ A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 101 RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE--HGIKPNAVTHNIMIK 158
            L + M      PD+ T++ LIN   ++ +  EA + +  ++        +  ++N ++ 
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 159 WYCKEGKIDKACKIVRNM-EENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLK 217
             CK  K+ +A  I   M  E    PD V+Y+ LID  CK   +  A ++   M      
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
            N  T N  L+ L  + ++ +A  +       G   D ++Y TLI G+    K ++A +L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCS 337
           ++ M  R   P+  TYN ++ GL +  K ++A ++  ++++ G  PD+ T+ T+++GFC+
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 338 EGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVT 397
            G++E+A++  ++MV K   PD+V  N LL G  R G   +A + F+  + +    D+V+
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 398 YNTLISSLCKERRLEDAFGLLSEMEEKK-LGPDRYTYAAIHTALVESGRLEEAQK 451
           +N +I  L K +RL+DA  +   ME+     PD  TY ++   L    RL EA K
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMK 424



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 154/299 (51%), Gaps = 1/299 (0%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +PD V+Y+ ++D   K  +L     L   M     VPN TTYN  ++G  + G + +A  
Sbjct: 154 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 213

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V + M      PDV TY+ LI+G+  A   ++A  L + M S    P+ VTYN L++   
Sbjct: 214 VYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLC 273

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           +  +  EA +L  ++ E G  P+ VT+  ++  +C  GKI++A ++   M   G  PD V
Sbjct: 274 KESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 333

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            YN L+    +AG   EA ++  VM  +  K +T++ N ++  L   K+LD+A  +    
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393

Query: 247 SK-RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
            +  G   D V+Y +LI G   +++ + A+K++ E+   ++ P    +N ++  +  +G
Sbjct: 394 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 1/227 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD +TY+T++       K ++  +L   M  +G  PN  TYN L+ G CK     EA
Sbjct: 222 GCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEA 281

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +   M +    PD  TY  L+ G+CN G +E+A  +  EM S    PDVV YN L+  
Sbjct: 282 HELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 341

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSP 183
           FF +G+  EA +L   +     KP+ V+HNIMI    K  ++D A ++   ME++ G SP
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 401

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           D VTYN+LI   C    + EA ++   + R  L  +    N +L  +
Sbjct: 402 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 166/354 (46%), Gaps = 25/354 (7%)

Query: 186 VTYNTLIDANCKAGNMEEAF---RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           V +   +   CK+G +E+AF   R M          ++ T ++++  LC   ++D A  L
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQI---MPSTFTYNAMIWG 299
           L +  KRGY  D  ++  LI    + +K   A +    M  R I     S F+YN+++  
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN-RTISTRASSCFSYNSLLNS 130

Query: 300 LSQSGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           L ++ K  QA  + + ++ +  ++PD  +++ +I GFC   ++ +A + + +M++ +  P
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           ++ T N  L+GL R+G +  A   +   I  G + D +TY+TLI      R+ + A  L 
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             M  +   P+  TY  +   L +  + +EA +    MVE G                  
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG-----------------C 293

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           DP  ++Y+  +   C+ G+ + A+++F+E   KG   +   Y  L+ G  +  K
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 347



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 1/267 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C+P+  TYN  L+ L +KG++ + + +  +M   G  P+  TY+ L+ G+     
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  + + M      P+  TYN L++G C     +EA  L ++M      PD VTY T
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+  F   G+  +A ++ DE+   G  P+ V +N ++K + + GK  +A ++ + M    
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR-KGLKMNTITLNTILHTLCCEKKLDEA 239
             PD V++N +ID   KA  +++A  + + M +  G   + +T N+++  LC E++L EA
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYF 266
             +     +     D  ++  L+   +
Sbjct: 423 MKVFKEIDRLKLSPDPHAFNVLLEAMY 449



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 114/197 (57%), Gaps = 1/197 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+ VTYN +L  L K+ K +E  +L   M ++G  P++ TY  L+ G+C +G +++A
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + V D M      PDV  YN L+ G+  AG   EA +L + M S +  PD V++N +I+ 
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG 376

Query: 125 FFESGRSMEAFKLIDELDE-HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
             ++ R  +A ++ + +++ HG  P+ VT+N +I   C E ++ +A K+ + ++    SP
Sbjct: 377 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436

Query: 184 DCVTYNTLIDANCKAGN 200
           D   +N L++A   AG+
Sbjct: 437 DPHAFNVLLEAMYAAGH 453


>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 256/565 (45%), Gaps = 73/565 (12%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD V+Y  ++D   ++G + +    L  MKK GL PN  TY  ++ G+CK G L EA
Sbjct: 188 GIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEA 247

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +  ++       D + Y  LI+G+C  G ++  F L ++ME   + P +VTYN++IN 
Sbjct: 248 YTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIING 307

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++GR+ EA    DE+ + GI  +AVT + ++  Y +E  +    +  R +EE+G   D
Sbjct: 308 LCKAGRTSEA----DEVSK-GIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCID 362

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA----- 239
            V  NT+I A    G +E+A+     M    L  +++T  T+++  C   +++EA     
Sbjct: 363 LVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFD 422

Query: 240 ----------YM------------------------------LLNSASKRGYYLDE---- 255
                     Y+                              +L S  K G  LD     
Sbjct: 423 EFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLV 482

Query: 256 ------------VSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                       V Y  +I    ++   ++AL L   +K++ I  + + YN++I GL + 
Sbjct: 483 IGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQ 542

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G   QA  + + L +  ++P E T+ T+I   C EG +  A Q   KMV K F P++   
Sbjct: 543 GCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVY 602

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N L+ G C+ G +E+AL        +    D  T + LI+  C +  +E A G   E ++
Sbjct: 603 NSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKK 662

Query: 424 KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
           K + PD   +  +   L   GR+EEA+     M++T  +   + + +T    E ++   I
Sbjct: 663 KDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFII 722

Query: 484 SYSEKINEHCSQGRYKDALQIFEET 508
           S        C QG  ++A+ +  E 
Sbjct: 723 SL-------CEQGSIQEAVTVLNEV 740



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 262/581 (45%), Gaps = 73/581 (12%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P+  T   +L ALF+ G++ EV DL+S M+++  V +   Y+  + GY + G L EA+R 
Sbjct: 121 PNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRK 180

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
              M +    PD  +Y +LI+G+   G +E+A    ++M+   L P++VTY  ++  F +
Sbjct: 181 HKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCK 240

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
            G+  EA+ L   ++  GI+ +   +  +I  +C  G ID    ++ +ME+ G SP  VT
Sbjct: 241 KGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVT 300

Query: 188 YNTLIDANCKAGNMEEA-------------FRMM--------DVMG---------RKGLK 217
           YN++I+  CKAG   EA             F  +        +V G           G+ 
Sbjct: 301 YNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVC 360

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
           ++ +  NTI+  L     L++AY      S      D V+Y T+I GY R  +   AL++
Sbjct: 361 IDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEI 420

Query: 278 WDEMKERQIMPST--FTYNAMIWGLSQSGKTEQ--------AIDMLNELLQSGMIPDE-- 325
           +DE ++  I      F       G  +S    +         + +L  L ++G I D   
Sbjct: 421 FDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYK 480

Query: 326 --------------TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
                           ++ +I   C EG ++KAL     + +K    +I   N +++GLC
Sbjct: 481 LVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLC 540

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           R+G L +A + F S          +TY TLI SLCKE  L DA  L  +M  K   P+  
Sbjct: 541 RQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVR 600

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
            Y ++     + G +EEA    +++++                   I P   + S  IN 
Sbjct: 601 VYNSLIDGYCKFGNMEEA---LNLLIDL--------------KARCIKPDEFTVSALING 643

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +C +G  + AL  F E ++K I  +   +M L+ GL  + +
Sbjct: 644 YCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAKGR 684



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 256/527 (48%), Gaps = 46/527 (8%)

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTY--NML 86
           ++D L+++   G++P+  T++ L+  +   G +  A+ V++LMT +K       +  + +
Sbjct: 37  LQDCLTNL---GILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKVRYPFGNFVSSSV 93

Query: 87  INGWCN-------AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLID 139
           I+G+C         G  E A      + S  L P++ T   L+   F+ GR  E   L+ 
Sbjct: 94  ISGFCKISKPQLAVGFFENA------VNSRVLRPNIATCTALLGALFQLGRVREVSDLVS 147

Query: 140 ELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
            ++      + V ++  I  Y +EG + +A +  + M E G +PD V+Y  LID   + G
Sbjct: 148 WMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREG 207

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
            +E+A   ++ M + GLK N +T   I+   C + KLDEAY L       G  +DE  Y 
Sbjct: 208 YVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYV 267

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
           TLI G+      +    L ++M++R I PS  TYN++I GL ++G+T +A     + +  
Sbjct: 268 TLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEA-----DEVSK 322

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKA 379
           G+  D  TF+T++HG+  E  V+  L+   ++ E     D+V CN ++  L   G LE A
Sbjct: 323 GIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDA 382

Query: 380 LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTA 439
             F++         DSVTY T+I+  C+  R+E+A  +  E  +  +       ++ +  
Sbjct: 383 YAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSI-------SSCYLF 435

Query: 440 LVESG-------RLEEAQK------FTSIMVETGKINHQVVQP-NTSKTPEEIDP--SSI 483
            V+ G        + E +K      F   ++++ K N +++         EE  P    +
Sbjct: 436 FVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLV 495

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
            YS  I+  C +G    AL +    ++KGIA+N   Y +++NGL ++
Sbjct: 496 DYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQ 542



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 256/555 (46%), Gaps = 105/555 (18%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G   D   Y T++D    +G ++ V  LL DM+K+G+ P+  TYN +++G CK G 
Sbjct: 254 VENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGR 313

Query: 61  LKEAMRVVDLMTQNKSLP-DVWTYNMLINGW---------------------------CN 92
             EA  V      +K +  D  T++ L++G+                           CN
Sbjct: 314 TSEADEV------SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCN 367

Query: 93  --------AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELD-- 142
                    G LE+A+   K M  + L+ D VTY T+IN +    R  EA ++ DE    
Sbjct: 368 TIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKT 427

Query: 143 ----------EHGIKPNA-------------VTHNI-MIKWYCKEGKIDKACKIVRNMEE 178
                     + G  P               V   + ++K   K G+I  A K+V   EE
Sbjct: 428 SISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEE 487

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           N    D V Y+ +ID  CK G++++A  +   + +KG+ +N    N++++ LC +  L +
Sbjct: 488 NLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQ 547

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+ L +S  K      E++Y TLI    ++     A +L+++M  +   P+   YN++I 
Sbjct: 548 AFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLID 607

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  + G  E+A+++L +L    + PDE T + +I+G+C +G +E AL F  +  +K   P
Sbjct: 608 GYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILP 667

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAV-----------DSVTYNTLISSLCK 407
           D +    L+ GLC +G +E+A    R  +L+ ++V           ++ +  + I SLC+
Sbjct: 668 DFLGFMYLVRGLCAKGRMEEARGILRE-MLQTRSVLELINRVDTEIETESVESFIISLCE 726

Query: 408 ERRLEDAFGLLSEM------------------EEKKL-------GPDRYTYAAIHTALVE 442
           +  +++A  +L+E+                  +E+K+        PD  +Y ++  +L  
Sbjct: 727 QGSIQEAVTVLNEVGSIFFPIGRRCRPQNRAEKEEKIYEGKGSRVPDFESYYSLIASLCS 786

Query: 443 SGRLEEAQKFTSIMV 457
            G L EA + T  M+
Sbjct: 787 RGELLEANRKTRQML 801



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 164/347 (47%), Gaps = 27/347 (7%)

Query: 188 YNTLIDANC-KAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN- 244
           +++LI   C K  + E+A  ++ D +   G+  ++ T ++++H+   + K+  A  +L  
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 245 -SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD-EMKERQIMPSTFTYNAMIWGLSQ 302
            +  K  Y        ++I+G+ +  K   A+  ++  +  R + P+  T  A++  L Q
Sbjct: 76  MTHDKVRYPFGNFVSSSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQ 135

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+  +  D+++ + +   + D   +++ I G+  EG + +A++ H +M+EK   PD V+
Sbjct: 136 LGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVS 195

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
             IL+ G  REG +EKA+ F       G   + VTY  ++   CK+ +L++A+ L   +E
Sbjct: 196 YTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVE 255

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
              +  D + Y  +       G ++        M + G                 I PS 
Sbjct: 256 NLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRG-----------------ISPSI 298

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           ++Y+  IN  C  GR  +A ++      KGIA +  T+  L++G I+
Sbjct: 299 VTYNSIINGLCKAGRTSEADEV-----SKGIAGDAVTFSTLLHGYIE 340



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 30/249 (12%)

Query: 293 YNAMIWGLSQSGK-TEQAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           ++++I GL    K  E+A+ +L + L + G++P   TF+++IH F S+G++ +A++    
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 351 MVEKSFK---PDIVTCNILLSGLCREGILEKALKFFR----SWILKGKAVDSVTYNTLIS 403
           M     +    + V+ +++ SG C+    + A+ FF     S +L+    +  T   L+ 
Sbjct: 76  MTHDKVRYPFGNFVSSSVI-SGFCKISKPQLAVGFFENAVNSRVLRP---NIATCTALLG 131

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKIN 463
           +L +  R+ +   L+S ME ++   D   Y++        G L EA +    M+E G   
Sbjct: 132 ALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG--- 188

Query: 464 HQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL 523
                         I P ++SY+  I+    +G  + A+   E+ ++ G+  N  TY  +
Sbjct: 189 --------------IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAI 234

Query: 524 MNGLIKRRK 532
           M G  K+ K
Sbjct: 235 MLGFCKKGK 243


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 185/328 (56%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  PD   +N ++  L K+ K+NE + L  ++ K+GL P   ++N L++GYCK G L + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+   M +N+  PDV+TY++LING C  G L++A +L  EM    L+P+ VT+ TLIN 
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
              +GR+    ++  ++   G+KP+ +T+N +I   CK G + +A K+V  M + G  PD
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY  LID  CK G++E A  +   M ++G++++ +    ++   C E ++ EA   L 
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
              + G   D+ +Y  +I G+ +        KL  EM+    +P   TYN ++ GL + G
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTII 332
           + + A  +L+ +L  G++PD+ T+N ++
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 207/412 (50%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           +KGK +      S ++ +G   +   +++L++ Y   G+  +A++   L+ ++       
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           +   L +      +   A+   +E+      PDV  +N L++R  +  +  EA  L  E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            + G++P  V+ N +I  YCK G +D+  ++ R M EN   PD  TY+ LI+  CK G +
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           ++A ++   M  +GL  N +T  T+++  C   + D    +     ++G   D ++Y TL
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G  +      A KL  EM +R + P  FTY  +I G  + G  E A+++  E+++ G+
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
             D   F  +I GFC EGQV +A +   +M+E   KPD  T  +++ G C++G ++   K
Sbjct: 432 ELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFK 491

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
             +     G     VTYN L++ LCK+ ++++A  LL  M    + PD  TY
Sbjct: 492 LLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITY 543



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 175/328 (53%)

Query: 40  GLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEA 99
           G  P+   +N+L+   CK   + EA  +   + +    P V ++N LING+C +G L++ 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 100 FRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKW 159
           FRL++ M   ++ PDV TY+ LIN   + G+  +A KL  E+ + G+ PN VT   +I  
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 160 YCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMN 219
           +C  G+ D   +I + M   G  PD +TYNTLI+  CK G++ EA +++  M ++GLK +
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 220 TITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWD 279
             T   ++   C E  L+ A  +     K G  LD V++  LI+G+ R+ +   A +   
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 280 EMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEG 339
           EM E  I P   TY  +I G  + G  +    +L E+   G +P   T+N +++G C +G
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 340 QVEKALQFHNKMVEKSFKPDIVTCNILL 367
           Q++ A    + M+     PD +T NILL
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 205/402 (50%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           +E  G    N+ ++ +++A    G  ++       ++K  L     +   L     KL  
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A    + +      PDV  +N+L++  C    + EA  L  E+    L P VV++NT
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN + +SG   + F+L   + E+ + P+  T++++I   CKEG++D A K+   M + G
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+ TLI+ +C  G  +    +   M RKG+K + IT NT+++ LC    L EA 
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAK 385

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   ++RG   D+ +Y  LI G  ++     AL++  EM +  I      + A+I G 
Sbjct: 386 KLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGF 445

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+  +A   L E+L++G+ PD+ T+  +IHGFC +G V+   +   +M      P +
Sbjct: 446 CREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGV 505

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           VT N+LL+GLC++G ++ A     + +  G   D +TYN L+
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 196/381 (51%)

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
            +++L+N + ++G   +A +  + +    L     +   L +R  +   +  A+   +E+
Sbjct: 157 VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEI 216

Query: 142 DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNM 201
            + G  P+    N+++   CKE KI++A  +   + + G  P  V++NTLI+  CK+GN+
Sbjct: 217 LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNL 276

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           ++ FR+   M    +  +  T + +++ LC E +LD+A  L      RG   ++V++ TL
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           I G+    +A+  ++++ +M  + + P   TYN +I GL + G   +A  ++ E+ Q G+
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALK 381
            PD+ T+  +I G C EG +E AL+   +MV++  + D V    L+SG CREG + +A +
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 382 FFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALV 441
             R  +  G   D  TY  +I   CK+  ++  F LL EM+     P   TY  +   L 
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516

Query: 442 ESGRLEEAQKFTSIMVETGKI 462
           + G+++ A      M+  G +
Sbjct: 517 KQGQMKNANMLLDAMLNLGVV 537



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 236/536 (44%), Gaps = 44/536 (8%)

Query: 3   GFGCL------PDNVTYNTILDALFKKGKLNEVRDLLSDMKK--QGLVPNRTTYNILVSG 54
           GF C       P +  ++ IL  + +  K++  + L S +K+    L PN     I ++ 
Sbjct: 19  GFLCFSTWMTPPTSHCHDPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNP 78

Query: 55  YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPD 114
           +        ++    L++  K L     + + I+ +C         ++  E +SL  L  
Sbjct: 79  H--------SLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSL--LQF 128

Query: 115 VVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVR 174
           VV+           G++  +      L+  G   + +  ++++  Y   G    A +  R
Sbjct: 129 VVS---------RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR 179

Query: 175 NMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEK 234
            + ++       +   L D   K      A+   + +   G   +    N ++H LC E 
Sbjct: 180 LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEH 239

Query: 235 KLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYN 294
           K++EA +L     KRG     VS+ TLI GY +    ++  +L   M E ++ P  FTY+
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYS 299

Query: 295 AMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEK 354
            +I GL + G+ + A  +  E+   G++P++ TF T+I+G C  G+ +  ++ + +M+ K
Sbjct: 300 VLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359

Query: 355 SFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDA 414
             KPD++T N L++GLC+ G L +A K       +G   D  TY  LI   CKE  LE A
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419

Query: 415 FGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKT 474
             +  EM ++ +  D   + A+ +     G++ EA++    M+E G              
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG-------------- 465

Query: 475 PEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              I P   +Y+  I+  C +G  K   ++ +E +  G      TY  L+NGL K+
Sbjct: 466 ---IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 163/365 (44%), Gaps = 34/365 (9%)

Query: 187 TYNTLIDANCKAGNMEEAFRMMD-VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +Y T+    C    + EA  ++  V+ RKG    +    ++L      +      +L+N+
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNA 164

Query: 246 ASKRGYYLDEVSYGTLI-----------TGYFRDE--KANRALKLW---DEMKERQIMPS 289
            +  GY+ D +    L+            GY  D   K N     W   +E+ +    P 
Sbjct: 165 YTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPD 224

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
              +N ++  L +  K  +A  +  E+ + G+ P   +FNT+I+G+C  G +++  +   
Sbjct: 225 VCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR 284

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
            M+E    PD+ T ++L++GLC+EG L+ A K F     +G   + VT+ TLI+  C   
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
           R +    +  +M  K + PD  TY  +   L + G L EA+K    M + G         
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG--------- 395

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
                   + P   +Y+  I+  C +G  + AL+I +E  ++GI ++   +  L++G  +
Sbjct: 396 --------LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447

Query: 530 RRKSI 534
             + I
Sbjct: 448 EGQVI 452


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 236/472 (50%), Gaps = 22/472 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT+L  L    +  +  +L+ +M +    PN  T+   +  +C+ G L  A+++
Sbjct: 208 PDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQL 267

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++ M +    PDV  Y+ L+NG+   G +++A  L   + ++   P+ V YN  +     
Sbjct: 268 LERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVL---LNTMLCKPNTVCYNAALKGLCM 324

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +LI E+      PN  T +++    C+ G +D A ++V  M++ G  PD V 
Sbjct: 325 AERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVI 384

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YNTLI+   + G +++A  ++D M       +TI+ N  L  LC  ++  +   L+    
Sbjct: 385 YNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQML 441

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +    L E+++  LI    +    N A++++++M + +  P   TY+++I G S+ G  E
Sbjct: 442 REDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVE 501

Query: 308 QAIDMLNELLQS-GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
            AI    EL QS    PD  ++N ++ G C   + E A +    M  K   P+ +T NIL
Sbjct: 502 SAI----ELFQSMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNIL 557

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           ++ LC++G  ++A++ F+     G   D  TYN LI+   ++ RL+DA  LLS M  K  
Sbjct: 558 INSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK-- 615

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVE--------TGKINHQVVQPN 470
            PD  +Y +    L  + R +EA++  + M+         T K  +Q+  PN
Sbjct: 616 -PDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYANQLFIPN 666



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 242/510 (47%), Gaps = 32/510 (6%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY  +++   + G+L +  +L++ M    + P+  TYN ++ G C     ++A  +++ 
Sbjct: 179 VTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEE 235

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M +N   P+  T+   I  +C  G+L+ A +L + M      PDVV Y+TL+N F E GR
Sbjct: 236 MIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGR 295

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
             +A  L++ +     KPN V +N  +K  C   +     +++  M      P+  T++ 
Sbjct: 296 VDDALVLLNTM---LCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSM 352

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L    C+ G ++ A  +++ M + G + + +  NT+++    + ++D+A MLL+S     
Sbjct: 353 LTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNP 412

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
              D +S+   +    R E+     +L  +M          T+N +I  L Q G    AI
Sbjct: 413 ---DTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAI 469

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
           ++  ++ +    PD  T++++I+GF  +G VE A++    M     KPDI + N +L GL
Sbjct: 470 EVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGL 526

Query: 371 CREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDR 430
           CR    E A +   +   K    + +T+N LI+SLC++   + A  +  +M E    PD 
Sbjct: 527 CRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDI 586

Query: 431 YTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKIN 490
           +TY A+     E GRL++A    S M                       P +ISY+  + 
Sbjct: 587 FTYNALINGFSEQGRLDDALNLLSTM--------------------SCKPDAISYNSTLK 626

Query: 491 EHCSQGRYKDALQIFEETRQKGIAINKSTY 520
             C   R+K+A +I  E  +K    N+ T+
Sbjct: 627 GLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 255/557 (45%), Gaps = 63/557 (11%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +  N ++  L    +L +   +L  +K+ G   +  ++N LV+GYC+ G L +A RV
Sbjct: 108 PAVIACNILIKKLCAHRRLADAERVLDALKESGSA-DAVSHNTLVAGYCRDGRLADAERV 166

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           ++   +     +V TY  LING+C +G L +A  L   + S+ + PD  TYNT++     
Sbjct: 167 LE-AAKVSGAANVVTYTALINGYCRSGRLADALNL---IASMPVAPDTYTYNTVLKGLCG 222

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + +  +A +L++E+  +   PN VT    I+ +C+ G +D A +++  M   G +PD V 
Sbjct: 223 AKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVI 282

Query: 188 YNTLIDANCKAGNMEEAFRMMDVM-----------GRKGLKM------------------ 218
           Y+TL++   + G +++A  +++ M             KGL M                  
Sbjct: 283 YSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKD 342

Query: 219 ---NTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              N  T + +   LC    +D A  ++    K G   D V Y TLI  +    + + AL
Sbjct: 343 CPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDAL 402

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L D M      P T ++NA +  L ++ +     +++ ++L+      E TFN +I   
Sbjct: 403 MLLDSM---LCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSL 459

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
           C  G V  A++   +M +    PDIVT + L++G   +G++E A++ F+S   K    D 
Sbjct: 460 CQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCKP---DI 516

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
            +YN ++  LC+  R EDA  L++ M  K   P+  T+  +  +L + G  + A +    
Sbjct: 517 FSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQ 576

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M E G                   P   +Y+  IN    QGR  DAL +      K  AI
Sbjct: 577 MPEYGST-----------------PDIFTYNALINGFSEQGRLDDALNLLSTMSCKPDAI 619

Query: 516 NKSTYMNLMNGLIKRRK 532
              +Y + + GL +  +
Sbjct: 620 ---SYNSTLKGLCRAER 633



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 220/428 (51%), Gaps = 12/428 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T + +  + G L+    LL  M + G  P+   Y+ LV+G+ + G + +A+
Sbjct: 241 CHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDAL 300

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            +++ M      P+   YN  + G C A   ++   L  EM      P+  T++ L +  
Sbjct: 301 VLLNTMLCK---PNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCL 357

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            + G    A ++++++ ++G +P+ V +N +I ++ ++G++D A  ++ +M  N   PD 
Sbjct: 358 CQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCN---PDT 414

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           +++N  + A C+     +   ++  M R+   +  +T N ++ +LC    ++ A  +   
Sbjct: 415 ISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQ 474

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             K     D V+Y +LI G+        A++L+  M  +   P  F+YNA++ GL ++ +
Sbjct: 475 MPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK---PDIFSYNAVLKGLCRAAR 531

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E A +++  + +    P+E TFN +I+  C +G  ++A++   +M E    PDI T N 
Sbjct: 532 WEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNA 591

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++G   +G L+ AL    +   K    D+++YN+ +  LC+  R ++A  +++EM  KK
Sbjct: 592 LINGFSEQGRLDDALNLLSTMSCKP---DAISYNSTLKGLCRAERWKEAEEIVAEMLRKK 648

Query: 426 LGPDRYTY 433
             P+  T+
Sbjct: 649 CPPNEVTF 656



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 244/513 (47%), Gaps = 40/513 (7%)

Query: 25  KLNEVRDLLSDMKKQGLVPNR-----TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPD 79
           +L ++ DL + ++  G +P+         NIL+   C    L +A RV+D + ++ S  D
Sbjct: 85  RLVQLEDLDAALRLVGSMPSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESGSA-D 143

Query: 80  VWTYNMLINGWCNAGMLEEAFRLRKEMESLKL--LPDVVTYNTLINRFFESGRSMEAFKL 137
             ++N L+ G+C  G L +A R+   +E+ K+    +VVTY  LIN +  SGR  +A  L
Sbjct: 144 AVSHNTLVAGYCRDGRLADAERV---LEAAKVSGAANVVTYTALINGYCRSGRLADALNL 200

Query: 138 IDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
           I  +    + P+  T+N ++K  C   + +KA +++  M  N   P+ VT+ T I + C+
Sbjct: 201 IASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQ 257

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G ++ A ++++ M R G   + +  +T+++    + ++D+A +LLN+   +    + V 
Sbjct: 258 NGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKP---NTVC 314

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y   + G    E+     +L  EM  +   P+  T++ +   L Q G  + A++++ ++ 
Sbjct: 315 YNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQ 374

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
           + G  PD   +NT+I+ F  +G+V+ AL   + M+     PD ++ N  L  LCR     
Sbjct: 375 KYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWY 431

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
              +     + +   +  +T+N LI SLC+   +  A  +  +M + +  PD  TY+++ 
Sbjct: 432 DVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLI 491

Query: 438 TALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGR 497
               E G +E A +    M                       P   SY+  +   C   R
Sbjct: 492 NGFSEQGLVESAIELFQSM--------------------PCKPDIFSYNAVLKGLCRAAR 531

Query: 498 YKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
           ++DA ++     +K    N+ T+  L+N L ++
Sbjct: 532 WEDAGELIANMARKDCPPNEITFNILINSLCQK 564



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 195/394 (49%), Gaps = 41/394 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PD V Y+T+++   ++G++++   LL+ M  +   PN   YN  + G C    
Sbjct: 271 MPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCK---PNTVCYNAALKGLCMAER 327

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            K+   ++  M +    P+  T++ML +  C  G+++ A  + ++M+     PDVV YNT
Sbjct: 328 WKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNT 387

Query: 121 LINRFFESGRSMEAFKLIDEL--DEHGIKPNA---------------------------- 150
           LIN F E GR  +A  L+D +  +   I  NA                            
Sbjct: 388 LINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPL 447

Query: 151 --VTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
             +T NI+I   C+ G ++ A ++   M +   +PD VTY++LI+   + G +E A  + 
Sbjct: 448 IEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELF 507

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
             M     K +  + N +L  LC   + ++A  L+ + +++    +E+++  LI    + 
Sbjct: 508 QSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQK 564

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
             A+RA++++ +M E    P  FTYNA+I G S+ G+ + A+++L+ +      PD  ++
Sbjct: 565 GFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDAISY 621

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
           N+ + G C   + ++A +   +M+ K   P+ VT
Sbjct: 622 NSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVT 655



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 38/290 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLN--------------------------------E 28
           M+ +GC PD V YNT+++   ++G+++                                +
Sbjct: 373 MQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYD 432

Query: 29  VRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
           V +L++ M ++       T+NIL+   C+ G +  A+ V + M + +  PD+ TY+ LIN
Sbjct: 433 VEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLIN 492

Query: 89  GWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKP 148
           G+   G++E A  L    +S+   PD+ +YN ++     + R  +A +LI  +      P
Sbjct: 493 GFSEQGLVESAIEL---FQSMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N +T NI+I   C++G  D+A ++ + M E G +PD  TYN LI+   + G +++A  ++
Sbjct: 550 NEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLL 609

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
             M     K + I+ N+ L  LC  ++  EA  ++    ++    +EV++
Sbjct: 610 STM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 206/386 (53%), Gaps = 9/386 (2%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKEAM 65
           L DN TY  ++ A    G+L    DLL +M++Q G+ P  + YN  V   CK G + EAM
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            VV  M      PDV T+N LI G C AG L+EA ++  EME      ++VTYNTLIN  
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPD 184
             +GRS EA  ++  +      P+  T+N +I  +CK G+ID+A   +  M++  G SPD
Sbjct: 135 SSAGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 185 CVTYNTLIDANCKAGNMEEAFRMM-DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             TY+ LI+  CK+ N+ +A  ++ +++GRK    + +  NT++   C  + LD A  LL
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
           +S  + G   D V+Y T+I G  R    ++   L ++M  R   P   TY  ++ GL ++
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           GK  +A  ++  +L+ G  P+  T++ +  G C   +++ A      + +K    D+V  
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF 371

Query: 364 NILLSGLCREGILEKALKFFRSWILK 389
             LL  + ++ +L++A   F+ W L+
Sbjct: 372 EALLLSV-KKRLLDRAA--FQKWKLE 394



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 192/363 (52%), Gaps = 6/363 (1%)

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK-LLPDVVTYNTLINRFFESGRSMEAF 135
           L D +TY +L+   C AG L+ A  L +EME    + P    YN  ++   +SG+  EA 
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 136 KLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDAN 195
           +++  + +   KP+ VT N +I   CK G++D+A +++  ME +GF+ + VTYNTLI+  
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 196 CKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR-GYYLD 254
             AG   EA  +M  M       +T T N I+H  C   ++D AY  L    +R G   D
Sbjct: 135 SSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWGLSQSGKTEQAIDML 313
             +Y  LI G  +     +A +L  EM  R+    S   +N ++ G  ++   ++A ++L
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 314 NELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           + +L+ G  PD  T++TII G C  G V+K      KMV +  KPD+VT  +L++GLC+ 
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G + +A +  +  +  G   ++VTY+ +   LCK  +L+ A  LL+ + +K    D   +
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF 371

Query: 434 AAI 436
            A+
Sbjct: 372 EAL 374



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 188/358 (52%), Gaps = 6/358 (1%)

Query: 112 LPDVVTYNTLINRFFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKAC 170
           L D  TY  L+     +G    A  L+ E+++  G+ P    +N  +   CK GK+ +A 
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           ++V+NM++    PD VT+NTLI   CKAG ++EA +++D M R G   N +T NT+++ L
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPS 289
               +  EA +++   +      D  +Y  +I G+ +  + +RA    +EMK+R    P 
Sbjct: 135 SSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELL-QSGMIPDETTFNTIIHGFCSEGQVEKALQFH 348
           TFTY+ +I GL +S    +A ++L E++ +         FNT++ G+C    +++A +  
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 349 NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           + M+E    PD+VT + ++ GLCR G ++K        + +G   D VTY  L++ LCK 
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 409 RRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQV 466
            ++ +A  L+  M E    P+  TY+ +   L +  +L+ A    + + + G+I   V
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVV 369



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 168/330 (50%), Gaps = 5/330 (1%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P    YN  + AL K GK+ E  +++ +MK     P+  T+N L++G CK G L EA
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            +V+D M ++    ++ TYN LING  +AG   EA  +   M+ +   PD  TYN +I+ 
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---MQGMTTTPDTQTYNAIIHG 165

Query: 125 FFESGRSMEAFKLIDELDEH-GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM-EENGFS 182
           F +SG    A+  ++E+ +  G  P+  T++I+I   CK   + KA ++++ M       
Sbjct: 166 FCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC 225

Query: 183 PDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
              V +NTL+D  CKA +++ A  ++  M   G   + +T +TI+  LC    +D+ + L
Sbjct: 226 ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L     RG   D V+Y  L+TG  +  K   A +L   M E    P+  TY+ +  GL +
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTII 332
             K + A D+L  +   G I D   F  ++
Sbjct: 346 IDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 166/304 (54%), Gaps = 5/304 (1%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+   C PD VT+NT++  L K G+L+E + +L +M++ G   N  TYN L++G    G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM-ESLKLLPDVVTYN 119
             EA+ V+  MT   + PD  TYN +I+G+C +G ++ A+   +EM +     PD  TY+
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 120 TLINRFFESGRSMEAFKLIDEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEE 178
            LIN   +S    +A +L+ E+        + V  N ++  YCK   +D+A +++ +M E
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           +G +PD VTY+T+ID  C+ G++++ F +++ M  +G K + +T   ++  LC   K+ E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A  L+    + G   + V+Y  +  G  + +K + A  L   ++++  +     + A++ 
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLL 376

Query: 299 GLSQ 302
            + +
Sbjct: 377 SVKK 380



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 27/348 (7%)

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRK-GLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           TY  L+ A+C AG ++ A  ++  M ++ G+       N  +H LC   K+ EA  ++ +
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
                   D V++ TLI G  +  + + A ++ DEM+      +  TYN +I GLS +G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 306 TEQAIDMLNELLQSGMI--PDETTFNTIIHGFCSEGQVEKALQFHNKMVEKS-FKPDIVT 362
           + +A+     L+  GM   PD  T+N IIHGFC  G++++A  F  +M +++   PD  T
Sbjct: 140 SGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFT 194

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSV-TYNTLISSLCKERRLEDAFGLLSEM 421
            +IL++GLC+   L KA +  +  I +     SV  +NTL+   CK + L+ A  LLS M
Sbjct: 195 YSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254

Query: 422 EEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
            E    PD  TY+ I   L   G +++       MV  G                   P 
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG-----------------CKPD 297

Query: 482 SISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
            ++Y+  +   C  G+  +A ++ +   + G   N  TY  + +GL K
Sbjct: 298 VVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 28/305 (9%)

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKERQIM-PSTFTYNAMIWGLSQSGKTEQAID 311
            D  +Y  L+  +    +   A+ L  EM+++  M P+   YN  +  L +SGK  +A++
Sbjct: 16  FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
           ++  +      PD  TFNT+I G C  G++++A Q  ++M    F  ++VT N L++GL 
Sbjct: 76  VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 372 REGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKK-LGP 428
             G   +A+      +++G     D+ TYN +I   CK   ++ A+G L EM+++    P
Sbjct: 136 SAGRSGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSP 190

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT----------------- 471
           D +TY+ +   L +S  L +A +    M+        VV  NT                 
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 472 --SKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             S       P  ++YS  I+  C  G       + E+   +G   +  TY  L+ GL K
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 530 RRKSI 534
             K +
Sbjct: 311 AGKMV 315


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/631 (25%), Positives = 271/631 (42%), Gaps = 115/631 (18%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCK-------LG 59
           +PD  TYNT+++  F +GK+N    + + M +Q  VP+  TY  ++ GYC+       L 
Sbjct: 324 IPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALS 383

Query: 60  WLKE-------------AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEM 106
            L E             A +++  M ++   PD+ TY+ LIN     GM+ EA   R+ M
Sbjct: 384 VLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYM 439

Query: 107 ESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH------------- 153
             +K+  D V++N +I+ +   G  +EAF + D +  +G  PN  T+             
Sbjct: 440 SRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHL 499

Query: 154 ----------------------NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
                                 N ++   CK G +D+A  +   M +N   PD  TY  L
Sbjct: 500 VQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTIL 559

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA-YMLLNSASKRG 250
           +   C+ G +  A  M+ +M  KG+  +T+    +L+ L  E ++  A Y+      K G
Sbjct: 560 LSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEG 619

Query: 251 YYLDEVSYGTLITGYFRDEKAN-----------------------------------RAL 275
            Y D ++Y +L+ GY +    N                                   ++L
Sbjct: 620 LYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSL 679

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
            L+  M  + I P   TY  +I GLS+ G  + A+  L +++  G+ PD   F+ +I  F
Sbjct: 680 YLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAF 739

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
             + ++  ALQ  N M      P   T + +++GL R+  L+++ +  R  +  G   + 
Sbjct: 740 SEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNH 799

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
             Y  L+++ C+  +++ AF L  EM+   + P     ++I   L + G+LEEA    S 
Sbjct: 800 THYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFST 859

Query: 456 MVETGKINHQVVQPNT--------SKTPE-----------EIDPSSISYSEKINEHCSQG 496
           M+ +G +   V    T        SK  +            +    +SY+  I   C   
Sbjct: 860 MMRSGMVP-TVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDK 918

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           R  DAL ++EE + KG+  N +TY+ L   +
Sbjct: 919 RISDALDLYEEMKSKGLWPNVTTYITLTGAM 949



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/564 (25%), Positives = 269/564 (47%), Gaps = 50/564 (8%)

Query: 9   DNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV 68
           D  T N +L++L   G+  +  D+L  MK   L  N  TYN ++  Y K G  K A+ V+
Sbjct: 222 DVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRL-SNSVTYNTILHWYVKKGRFKAALCVL 280

Query: 69  DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFES 128
           + M ++    D++TYN++I+  C       AF L K M    L+PD  TYNTLIN FF  
Sbjct: 281 EDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGE 340

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC------------------ 170
           G+   A  + + +      P+  T+  MI  YC+  +IDKA                   
Sbjct: 341 GKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISK 400

Query: 171 --KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH 228
             +I+++M E+G  PD VTY+ LI+     G + EA      M R  +  ++++ N I+ 
Sbjct: 401 AKQILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSRMKISFDSVSFNCIID 456

Query: 229 TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMP 288
           + C    + EA+ + ++  + G+  +  +Y  L+ G  +     +A +    + +   +P
Sbjct: 457 SYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLD---IP 513

Query: 289 STF---TYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
           S     T+NA++ G+ + G  ++A+D+  +++++  +PD  T+  ++ GFC +G++  AL
Sbjct: 514 SAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPAL 573

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILK-GKAVDSVTYNTLISS 404
                M++K   PD V    LL+GL  EG ++ A   F+  I K G   D + YN+L++ 
Sbjct: 574 IMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNG 633

Query: 405 LCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG---- 460
             K   +     ++S+M + ++ P+  +Y  +    V+ G+  ++      MV  G    
Sbjct: 634 YLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPD 693

Query: 461 KINHQVVQPNTSK--------------TPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
            + ++++    S+                E I P  + +   I     + +  +ALQ+F 
Sbjct: 694 NVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFN 753

Query: 507 ETRQKGIAINKSTYMNLMNGLIKR 530
             +   ++ +  TY  ++NGLI++
Sbjct: 754 CMKWLRMSPSSKTYSAMINGLIRK 777



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 246/513 (47%), Gaps = 36/513 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G  P+  TY  +L  L + G L + +  +  +       +  T+N L+ G CK G 
Sbjct: 474 MVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGT 533

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L EA+ + + M +N  LPD+ TY +L++G+C  G +  A  + + M    ++PD V Y  
Sbjct: 534 LDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTC 593

Query: 121 LINRFFESGRSMEAFKLIDELD-EHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
           L+N     G+   A  +  E+  + G+  + + +N ++  Y K G I+   +++ +M ++
Sbjct: 594 LLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQS 653

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
              P+  +YN L+    K G   ++  +   M RKG++ + +T   ++  L     +D A
Sbjct: 654 EVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIA 713

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
              L      G + D + +  LIT +    K + AL+L++ MK  ++ PS+ TY+AMI G
Sbjct: 714 VKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMING 773

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +    +Q+ ++L E+LQ G+ P+ T +  +++  C  G++++A +   +M      P 
Sbjct: 774 LIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPA 833

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKA--------------------------- 392
            V  + ++ GLC+ G LE+A+  F + +  G                             
Sbjct: 834 DVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKR 893

Query: 393 --------VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                   VD V+YN LI+ LCK++R+ DA  L  EM+ K L P+  TY  +  A+  +G
Sbjct: 894 LMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTG 953

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
            ++  ++    + E G I   V   N  +  E+
Sbjct: 954 IMQNGEELLEDIEERGLIPVYVQLENLERQMED 986



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 205/466 (43%), Gaps = 70/466 (15%)

Query: 116 VTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN 175
           +  NT++    E G S   +  + E   H    +  T NI++   C  G+  KA  +++ 
Sbjct: 189 IACNTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQK 248

Query: 176 MEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKK 235
           M+    S + VTYNT++    K G  + A  +++ M R  +  +  T N ++  LC  K+
Sbjct: 249 MKTCRLS-NSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKR 307

Query: 236 LDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNA 295
              A++LL    K     DE +Y TLI G+F + K N A  +++ M  +  +PS  TY  
Sbjct: 308 SARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTT 367

Query: 296 MIWGLSQSGKTEQAIDMLNELLQSGMIP-------------------------------- 323
           MI G  ++ + ++A+ +L+E+  +G++P                                
Sbjct: 368 MIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEG 427

Query: 324 -------------------DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
                              D  +FN II  +C  G + +A   ++ MV     P++ T  
Sbjct: 428 MITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQ 487

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
            LL GLC+ G L +A +F    +    A+D  T+N L+  +CK   L++A  L  +M + 
Sbjct: 488 NLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKN 547

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
              PD +TY  + +     G++  A     +M++ G +                 P +++
Sbjct: 548 NCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVV-----------------PDTVA 590

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQK-GIAINKSTYMNLMNGLIK 529
           Y+  +N   ++G+ K A  +F+E   K G+  +   Y +LMNG +K
Sbjct: 591 YTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLK 636



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 176/381 (46%), Gaps = 37/381 (9%)

Query: 149 NAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
           N V   +++K Y KE K+  A   V  M++ GF    +  NT++ A  + G  +  +  +
Sbjct: 152 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFL 211

Query: 209 DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
                    ++  T N +L++LC   +  +A  +L    K     + V+Y T++  Y + 
Sbjct: 212 RESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KTCRLSNSVTYNTILHWYVKK 270

Query: 269 EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +   AL + ++M+   I    +TYN MI  L +  ++ +A  +L  + +  +IPDE T+
Sbjct: 271 GRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTY 330

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           NT+I+GF  EG++  A    N M+ ++F P + T   ++ G CR   ++KAL       +
Sbjct: 331 NTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQI 390

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
            G          + S + K ++      +L  M E  + PD  TY    +AL+  G + E
Sbjct: 391 TG---------VMPSEISKAKQ------ILKSMLEDGIDPDIVTY----SALINEGMITE 431

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A+ F   M                 +  +I   S+S++  I+ +C +G   +A  +++  
Sbjct: 432 AEHFRQYM-----------------SRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAM 474

Query: 509 RQKGIAINKSTYMNLMNGLIK 529
            + G + N  TY NL+ GL +
Sbjct: 475 VRYGHSPNVCTYQNLLRGLCQ 495



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 6/211 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P++  Y  +++A  + GK++    L  +MK  G+VP     + ++ G CK G 
Sbjct: 790 MLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGK 849

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L+EA+ V   M ++  +P V T+  L++  C    + +A  L++ MES +L  DVV+YN 
Sbjct: 850 LEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNV 909

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    +  R  +A  L +E+   G+ PN  T+  +       G +    +++ ++EE G
Sbjct: 910 LITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERG 969

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
             P  V    L         ME+A R ++++
Sbjct: 970 LIPVYVQLENL------ERQMEDAIRRLNMI 994



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 19/210 (9%)

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           NTI+     +G+ +    F  + +  +F  D+ TCNILL+ LC  G   KA    +  + 
Sbjct: 192 NTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQK-MK 250

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
             +  +SVTYNT++    K+ R + A  +L +ME   +  D YTY  +   L    R   
Sbjct: 251 TCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSAR 310

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A      M +                 +++ P   +Y+  IN    +G+   A  +F   
Sbjct: 311 AFLLLKRMRK-----------------DDLIPDECTYNTLINGFFGEGKINHAHYVFNHM 353

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            ++    + +TY  +++G  + R+ I KA+
Sbjct: 354 LRQTFVPSVATYTTMIDGYCRNRR-IDKAL 382


>gi|224135537|ref|XP_002322098.1| predicted protein [Populus trichocarpa]
 gi|222869094|gb|EEF06225.1| predicted protein [Populus trichocarpa]
          Length = 668

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 270/591 (45%), Gaps = 69/591 (11%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G LPD++  ++I+  L    + NE    L        VP+  T N+LV+   +L   K+ 
Sbjct: 80  GYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVA---RLLHSKDP 136

Query: 65  MRVVDLMTQ-----NKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            R ++++ +      + +P +  YN LI+ +C+  +   A R+  +M +    P +V+Y 
Sbjct: 137 FRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYT 196

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIK--------------------- 158
           TL+N + + G   +A+KL DE+ E G+ PN+++++++I+                     
Sbjct: 197 TLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQR 256

Query: 159 -------------------WYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAG 199
                                C+EG  ++   I   M +     +   Y  LID+ CK G
Sbjct: 257 MRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVG 316

Query: 200 NMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYG 259
               A R++ +M +KG   + ++ N+I+H LC E     AY LL      GY L E +Y 
Sbjct: 317 RSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYK 376

Query: 260 TLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQS 319
            L+    +    ++A ++   M  +  M  T  YN  +  L       + +++L  +LQ+
Sbjct: 377 VLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQT 436

Query: 320 GMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK-PDIVTCNILLSGLCREGILEK 378
              PD  T NT+I+GFC  G+VE+AL+  N M+   F  PD VT   ++SGL   G  ++
Sbjct: 437 NCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQE 496

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A       + KG     VTYN ++  L K +  ++A  +  EM    +  +  TY+ I  
Sbjct: 497 ARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYSIIVE 556

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSK------------------TPEEIDP 480
            L ESG+++ A+KF   ++   KI+   V     K                      ++P
Sbjct: 557 GLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYELVDSGVNP 616

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNL--MNGLIK 529
           + +SY+  I+  CS G  ++A QI  E ++ G+  +  T+  L  ++G +K
Sbjct: 617 NIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWRTLDKLHGQVK 667



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 154/335 (45%), Gaps = 38/335 (11%)

Query: 3   GFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLK 62
           GFG L    TY  +++AL +   L++ R++L  M  +G +     YNI +   C +    
Sbjct: 365 GFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPT 424

Query: 63  EAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKL-LPDVVTYNTL 121
           E + V+  M Q    PDV T N +ING+C  G +EEA ++  +M + K   PD VT+ ++
Sbjct: 425 ELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSI 484

Query: 122 INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
           I+     GRS EA  L+ ++ E GI P  VT+N +++   K     +A  +   M  +G 
Sbjct: 485 ISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGV 544

Query: 182 SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYM 241
           + +  TY+ +++  C++G ++ A +  D           +   + +H             
Sbjct: 545 AANSQTYSIIVEGLCESGQIDGAKKFWD----------EVIWPSKIH------------- 581

Query: 242 LLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLS 301
                       D+  Y  ++ G  R    N A+    E+ +  + P+  +YN +I    
Sbjct: 582 ------------DDFVYAAILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRAC 629

Query: 302 QSGKTEQAIDMLNELLQSGMIPDETTFNTI--IHG 334
             G   +A  +  E+ ++G+ PD  T+ T+  +HG
Sbjct: 630 SLGMKREAYQIAGEMQKNGLTPDAVTWRTLDKLHG 664



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 100/191 (52%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G    PD VT+ +I+  L   G+  E R+LL  M ++G+ P   TYN ++ G  KL  
Sbjct: 469 MTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQL 528

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KEAM V D M  +    +  TY++++ G C +G ++ A +   E+     + D   Y  
Sbjct: 529 TKEAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAA 588

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     SG   EA   + EL + G+ PN V++NI+I   C  G   +A +I   M++NG
Sbjct: 589 ILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNG 648

Query: 181 FSPDCVTYNTL 191
            +PD VT+ TL
Sbjct: 649 LTPDAVTWRTL 659



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 154/344 (44%), Gaps = 24/344 (6%)

Query: 193 DANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYY 252
           D   K  N++EA R++D +  +G   +++ L++I+H LC   + +EA+  L         
Sbjct: 58  DLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCV 117

Query: 253 LDEVSYGTLITGYFRDEKANRALKLWDEMKE--RQIMPSTFTYNAMIWGLSQSGKTEQAI 310
            DE +   L+      +   R L +   + E   + +PS   YN +I           A 
Sbjct: 118 PDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAH 177

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            ML +++  G  P   ++ T+++G+   G++  A +  ++M E    P+ ++ ++L+ G+
Sbjct: 178 RMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGV 237

Query: 371 CREGILEKA-----LKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            R+  +E+      + F R    + ++V+S  ++ L+  LC+E    + F +  EM +  
Sbjct: 238 LRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGN 297

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
              + + Y  +  +L + GR   A +   IM + G                   PS +SY
Sbjct: 298 RVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKG-----------------FTPSVVSY 340

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
           +  I+  C +G    A Q+ EE    G  +++ TY  L+  L +
Sbjct: 341 NSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALCQ 384



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 23/228 (10%)

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ-VEKALQFHNKMVEKSFKPDIVTCNI 365
           EQA   LN   QS  I + + +   IH  C++ + V++AL+  + +  + + PD +  + 
Sbjct: 34  EQA---LNHQQQSICITNRSYWTQKIHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSS 90

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ GLC      +A +    ++      D  T N L++ L   +       ++  + E K
Sbjct: 91  IIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFK 150

Query: 426 --LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSI 483
               P    Y  +            A +    M+  G                   PS +
Sbjct: 151 PEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHC-----------------PSIV 193

Query: 484 SYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           SY+  +N +   G   DA ++F+E  + G+  N  +Y  L+ G++++R
Sbjct: 194 SYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKR 241


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 232/447 (51%), Gaps = 18/447 (4%)

Query: 51  LVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
           L+  Y + G L+ AMRV+ LM ++   PD+   NM +N    AG +++A    + M  + 
Sbjct: 135 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG 194

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + PDV TYN LI     + R ++A ++I  + ++G  P+ +++  ++ + CKE ++++  
Sbjct: 195 VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVR 254

Query: 171 KIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
            +++ M  + G  PD VTYN LI    K G+ +EA   +     K  +++ +  + I+H+
Sbjct: 255 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHS 314

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C   ++ EA  ++     +G   D V+Y T++ G+ R  + ++A K+   M +    P+
Sbjct: 315 FCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPN 374

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
           T T+ A++ GL + GKT +A ++LN+  +    P + T++ ++HGF  EG+++++     
Sbjct: 375 TVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVV 434

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M++K F P  V  N+L+  LC++G   +A  F      KG  ++ V + T+I    ++ 
Sbjct: 435 QMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQG 494

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            LE A  L+ +M      PD  TY  +  AL + GRL+EA      M+  G +       
Sbjct: 495 DLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLL------- 547

Query: 470 NTSKTPEEIDPSSISYSEKINEHCSQG 496
                     P+ ++Y   I+ +C +G
Sbjct: 548 ----------PTPVTYRTVIHRYCEKG 564



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 213/409 (52%), Gaps = 1/409 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD    N  ++ L   G++++  +    M++ G+ P+  TYN L+ G C    
Sbjct: 155 MQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARR 214

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYN 119
           + +AM ++ +M QN   PD  +Y  +++  C    +EE   L + M +   L PD VTYN
Sbjct: 215 VVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYN 274

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI+   + G + EA + + E +    + + V ++ ++  +C  G++ +A +IV  M   
Sbjct: 275 VLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISK 334

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY+T++D  C+ G +++A +MM  M +   K NT+T   +L+ LC   K  EA
Sbjct: 335 GCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA 394

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + LLN + +  +   +++Y  ++ G+ R+ K   +  +  +M ++   P+T   N +I  
Sbjct: 395 WELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHA 454

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L + GK  +A D + +    G   +   F T+IHGF  +G +E AL   + M   +  PD
Sbjct: 455 LCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPD 514

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           +VT  +++  L ++G L++A       + +G     VTY T+I   C++
Sbjct: 515 VVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEK 563



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 210/424 (49%), Gaps = 1/424 (0%)

Query: 22  KKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVW 81
           + GKL     +L  M+K G  P+ +  N+ V+     G + +A+   + M +    PDV+
Sbjct: 141 RAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVY 200

Query: 82  TYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDEL 141
           TYN LI G C A  + +A  +   M      PD ++Y T+++   +  R  E   L+  +
Sbjct: 201 TYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRM 260

Query: 142 -DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGN 200
            ++ G+ P+ VT+N++I    K G  D+A + +R  E   F  D V Y+ ++ + C  G 
Sbjct: 261 RNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGR 320

Query: 201 MEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGT 260
           M EA  ++  M  KG + + +T +T++   C   +LD+A  ++    K     + V++  
Sbjct: 321 MAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTA 380

Query: 261 LITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSG 320
           L+ G  +  K + A +L ++ +E    PS  TY+ ++ G  + GK +++ D++ ++LQ G
Sbjct: 381 LLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKG 440

Query: 321 MIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKAL 380
             P     N +IH  C +G+  +A  F  +   K    ++V    ++ G  R+G LE AL
Sbjct: 441 FFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESAL 500

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
                  L  +  D VTY  ++ +L K+ RL++A GL+ +M  + L P   TY  +    
Sbjct: 501 SLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRY 560

Query: 441 VESG 444
            E G
Sbjct: 561 CEKG 564



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 19/271 (7%)

Query: 270 KANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFN 329
           + ++AL+  + M+   + P  +TYN +I GL  + +   A++M+  +LQ+G  PD+ ++ 
Sbjct: 179 RVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYY 238

Query: 330 TIIHGFCSEGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
           T++   C E +VE+      +M  +    PD VT N+L+ GL + G  ++AL+F R    
Sbjct: 239 TVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEG 298

Query: 389 KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
           K   VD V Y+ ++ S C   R+ +A  ++ EM  K   PD  TY+ +       G L++
Sbjct: 299 KRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQ 358

Query: 449 AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
           A+K    M +                  +  P++++++  +N  C  G+  +A ++  ++
Sbjct: 359 ARKMMKHMYKN-----------------DCKPNTVTHTALLNGLCKVGKTSEAWELLNKS 401

Query: 509 RQKGIAINKSTYMNLMNGLIKRRKSISKAVD 539
            ++    +  TY  +M+G  +R   + ++ D
Sbjct: 402 EEEWWTPSDITYSVVMHGF-RREGKLKESCD 431



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 33/317 (10%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD VTY+T++D   + G+L++ R ++  M K    PN  T+  L++G CK+G   EA
Sbjct: 335 GCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA 394

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             +++   +    P   TY+++++G+   G L+E+  +  +M      P  V  N LI+ 
Sbjct: 395 WELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHA 454

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             + G+  EA   +++    G   N V    +I  + ++G ++ A  ++ +M  +   PD
Sbjct: 455 LCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPD 514

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILH---------------- 228
            VTY  ++DA  K G ++EA  +++ M  +GL    +T  T++H                
Sbjct: 515 VVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLE 574

Query: 229 -----------------TLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKA 271
                             LC   KL+EAY LL    +     D  +   L+  +      
Sbjct: 575 KMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLG 634

Query: 272 NRALKLWDEMKERQIMP 288
            +A  +   M  R ++P
Sbjct: 635 LQAYNVACRMFRRNLIP 651



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 18/292 (6%)

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+     A ++  Y     +  L+  Y R  K   A+++   M++    P     N  + 
Sbjct: 113 AFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVN 172

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
            L  +G+ ++A++    + + G+ PD  T+N +I G C   +V  A++    M++    P
Sbjct: 173 VLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 232

Query: 359 DIVTCNILLSGLCREGILEKALKFF-RSWILKGKAVDSVTYNTLISSLCKERRLEDAFGL 417
           D ++   ++S LC+E  +E+      R     G   D VTYN LI  L K    ++A   
Sbjct: 233 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 292

Query: 418 LSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEE 477
           L E E K+   D   Y+AI  +   +GR+ EA++    M+  G                 
Sbjct: 293 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKG----------------- 335

Query: 478 IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIK 529
             P  ++YS  ++  C  G    A ++ +   +     N  T+  L+NGL K
Sbjct: 336 CQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCK 387



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 33/213 (15%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G  P  V  N ++ AL K GK  E +D +   + +G   N   +  ++ G+ + G L+ A
Sbjct: 440 GFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESA 499

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           + ++D M  +   PDV TY ++++     G L+EA  L ++M +  LLP  VTY T+I+R
Sbjct: 500 LSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHR 559

Query: 125 FFESGRSM---------------------------------EAFKLIDELDEHGIKPNAV 151
           + E G                                    EA+ L+ ++       +A 
Sbjct: 560 YCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQ 619

Query: 152 THNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           T +I+++ +   G   +A  +   M      PD
Sbjct: 620 TCHILMESFLNRGLGLQAYNVACRMFRRNLIPD 652



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G LP  VTY T++    +KG L ++ +LL  M  +Q +   ++ YN +V   C  G L E
Sbjct: 545 GLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM---KSAYNQVVEKLCAFGKLNE 601

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  ++  + +  S+ D  T ++L+  + N G+  +A+ +   M    L+PDV     + N
Sbjct: 602 AYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDN 661

Query: 124 RFFESGRSMEAFKLIDELDEHGI 146
           +           KL+ +  E G+
Sbjct: 662 QLASEKNKPVPGKLMVKFAERGL 684


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 241/471 (51%), Gaps = 18/471 (3%)

Query: 27  NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNML 86
           +  R ++  M ++G+      +  L+  Y + G L+ AMRV+ LM ++   PD+   NM 
Sbjct: 144 DPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMA 203

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           +N    AG +++A    + M  + + PDV TYN LI     + R ++A ++I  + ++G 
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEAF 205
            P+ +++  ++ + CKE ++++   +++ M  + G  PD VTYN LI    K G+ +EA 
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
             +     K  +++ +  + I+H+ C   ++ EA  ++     +G   D V+Y T++ G+
Sbjct: 324 EFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R  + ++A K+   M +    P+T T+ A++ GL + GKT +A ++LN+  +    P +
Sbjct: 384 CRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSD 443

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T++ ++HGF  EG+++++     +M++K F P  V  N+L+  LC++    +A  F   
Sbjct: 444 ITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQ 503

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              KG  ++ V + T+I    ++  LE A  L+ +M      PD  TY  +  AL + GR
Sbjct: 504 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGR 563

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
           L+EA      M+  G                 + P+ ++Y   I+ +C +G
Sbjct: 564 LKEATGLVEKMLNRG-----------------VLPTPVTYRTVIHRYCEKG 597



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 212/409 (51%), Gaps = 1/409 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD    N  ++ L   G++++  +    M++ G+ P+  TYN L+ G C    
Sbjct: 188 MQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARR 247

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYN 119
           + +AM ++ +M QN   PD  +Y  +++  C    +EE   L + M +   L PD VTYN
Sbjct: 248 VVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYN 307

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI+   + G + EA + + E +    + + V ++ ++  +C  G++ +A +IV  M   
Sbjct: 308 VLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISK 367

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY+T++D  C+ G +++A +MM  M +   K NT+T   +L+ LC   K  EA
Sbjct: 368 GCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA 427

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + LLN + +  +   +++Y  ++ G+ R+ K   +  +  +M ++   P+T   N +I  
Sbjct: 428 WELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHA 487

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  K  +A D + +    G   +   F T+IHGF  +G +E AL   + M   +  PD
Sbjct: 488 LCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPD 547

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           +VT  +++  L ++G L++A       + +G     VTY T+I   C++
Sbjct: 548 VVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEK 596



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKE 63
           GC PD ++Y T++  L K+ ++ EVR LL  M+   GL P++ TYN+L+ G  K G   E
Sbjct: 262 GCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADE 321

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +      +   D   Y+ +++ +C  G + EA  +  EM S    PDVVTY+T+++
Sbjct: 322 ALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVD 381

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   G   +A K++  + ++  KPN VTH  ++   CK GK  +A +++   EE  ++P
Sbjct: 382 GFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTP 441

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             +TY+ ++    + G ++E+  ++  M +KG    T+ +N ++H LC ++K  EA   +
Sbjct: 442 SDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFM 501

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G  ++ V++ T+I G+ R      AL L D+M      P   TY  ++  L + 
Sbjct: 502 EQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKK 561

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ ++A  ++ ++L  G++P   T+ T+IH +C +G +E  L    KM+ +         
Sbjct: 562 GRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAY-- 619

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  LC  G L +A       +      D+ T + L+ S         A+ +   M  
Sbjct: 620 NQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFR 679

Query: 424 KKLGPD 429
           + L PD
Sbjct: 680 RNLIPD 685



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 210/463 (45%), Gaps = 18/463 (3%)

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A RVV LM +         +  L+  +  AG L  A R+   M+     PD+   N  +N
Sbjct: 146 ARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVN 205

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               +GR  +A +  + +   G++P+  T+N +IK  C   ++  A +++  M +NG  P
Sbjct: 206 VLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 265

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVM-GRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           D ++Y T++   CK   +EE   ++  M    GL  + +T N ++H L      DEA   
Sbjct: 266 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L  +  + + +DEV Y  ++  +  + +   A ++  EM  +   P   TY+ ++ G  +
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCR 385

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ +QA  M+  + ++   P+  T   +++G C  G+  +A +  NK  E+ + P  +T
Sbjct: 386 IGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDIT 445

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            ++++ G  REG L+++       + KG    +V  N LI +LCK+R+  +A   + + +
Sbjct: 446 YSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQ 505

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            K    +   +  +       G LE A      M  + +                  P  
Sbjct: 506 SKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNR-----------------HPDV 548

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
           ++Y+  ++    +GR K+A  + E+   +G+     TY  +++
Sbjct: 549 VTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIH 591



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 161/350 (46%), Gaps = 19/350 (5%)

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A R++ +M R+G++  T     ++ +     KL  A  +L+   K G   D       
Sbjct: 144 DPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMA 203

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           +       + ++AL+  + M+   + P  +TYN +I GL  + +   A++M+  +LQ+G 
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGILEKAL 380
            PD+ ++ T++   C E +VE+      +M  +    PD VT N+L+ GL + G  ++AL
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +F R    K   VD V Y+ ++ S C   R+ +A  ++ EM  K   PD  TY+ +    
Sbjct: 324 EFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383

Query: 441 VESGRLEEAQKFTSIM----------VETGKINHQVVQPNTSKTPEEID--------PSS 482
              G L++A+K    M            T  +N       TS+  E ++        PS 
Sbjct: 384 CRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSD 443

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+YS  ++    +G+ K++  +  +  QKG          L++ L K RK
Sbjct: 444 ITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRK 493



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G LP  VTY T++    +KG L ++ +LL  M  +Q +   ++ YN +V   C  G L E
Sbjct: 578 GVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM---KSAYNQVVEKLCAFGKLNE 634

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  ++  + +  S+ D  T ++L+  + N G+  +A+ +   M    L+PDV     + N
Sbjct: 635 AYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDN 694

Query: 124 RFFESGRSMEAFKLIDELDEHGI 146
           +           KL+ +  E G+
Sbjct: 695 QLASEKNKPVPGKLMVKFAERGL 717



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 22/199 (11%)

Query: 337 SEGQVEKALQFH---NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           + G V +A +F    ++       P++   + +LS L    + + A +  R  I +G   
Sbjct: 103 ARGDVRRAFEFFRWADRQWRYRHAPEVF--DEMLSLLSNTRLHDPARRVVRLMIRRGVRR 160

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +  +  L+ S  +  +L  A  +L  M++    PD          LV +GR+++A +F 
Sbjct: 161 GTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFA 220

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M   G                 ++P   +Y+  I   C   R  DA+++     Q G 
Sbjct: 221 ERMRRVG-----------------VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 514 AINKSTYMNLMNGLIKRRK 532
             +K +Y  +M+ L K ++
Sbjct: 264 PPDKISYYTVMSFLCKEKR 282


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 153/570 (26%), Positives = 276/570 (48%), Gaps = 55/570 (9%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V Y  ++DAL + G++ E  ++  +MK++G+VP + +YN L+SG+ K     +A+ +   
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M  +   P+ +T+ + IN +  +G   +A +  + M+S  ++PDVV  N ++    +SGR
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 490

Query: 131 SMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNT 190
              A ++  EL   G+ P+ +T+ +MIK   K  K D+A KI  +M EN   PD +  N+
Sbjct: 491 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 550

Query: 191 LIDANCKAGNMEEAFR-------------------MMDVMGRKG---------------- 215
           LID   KAG  +EA+R                   ++  +GR+G                
Sbjct: 551 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 610

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
              N IT NTIL  LC    +++A  +L S + +G   D  SY T+I G  ++E+ N A 
Sbjct: 611 YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAF 670

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNE-LLQSGMIPDETTFNTIIHG 334
            ++ +MK + ++P   T   ++    + G  ++A+ ++ +  LQ G   D ++ ++++ G
Sbjct: 671 SIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEG 729

Query: 335 FCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
              +  +EK+++F   +       D      L+  LC++    +A +  + +   G ++ 
Sbjct: 730 ILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 789

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
           +  YN+LI  L  E  ++ A GL +EM+E   GPD +TY  +  A+ +S R+EE  K   
Sbjct: 790 TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 849

Query: 455 IM----VETGKINHQVVQPNTSKT---PEEID-----------PSSISYSEKINEHCSQG 496
            M     E+  + +  +     K+    + ID           P+  +Y   ++     G
Sbjct: 850 EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 909

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNG 526
           R +DA  +F E  + G   N + Y  L+NG
Sbjct: 910 RIEDAENLFNEMLEYGCKANCTIYNILLNG 939



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 257/547 (46%), Gaps = 55/547 (10%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  GC PD +T+  ++  L   G++++ +D+   MKK    P+R TY  L+  +   G 
Sbjct: 291 MENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 350

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            +  M + + M  +    +V  Y  +I+  C  G + EA  +  EM+   ++P+  +YN+
Sbjct: 351 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 410

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++ R  +A +L   +D HG KPN  TH + I +Y K G+  KA +    M+  G
Sbjct: 411 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 470

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             PD V  N ++    K+G +  A R+   +   G+  +TIT   ++   CC K      
Sbjct: 471 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK--CCSK------ 522

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
                ASK     DE                  A+K++ +M E   +P     N++I  L
Sbjct: 523 -----ASK----FDE------------------AVKIFYDMIENNCVPDVLAVNSLIDTL 555

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+ ++A  +  +L +  + P + T+NT++ G   EG+V++ +    +M   ++ P++
Sbjct: 556 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 615

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N +L  LC+ G +  AL    S   KG   D  +YNT+I  L KE R  +AF +  +
Sbjct: 616 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 675

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKIN-----HQVVQPNTSKT 474
           M +K L PD  T   I  + V+ G ++EA        ++ G        H +++    K 
Sbjct: 676 M-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 734

Query: 475 --------PEEIDPSSISYSE-----KINEHCSQGRYKDALQIFEETRQKGIAINKSTYM 521
                    E I  S I+  +      I   C Q +  +A ++ ++ +  G+++    Y 
Sbjct: 735 GIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYN 794

Query: 522 NLMNGLI 528
           +L+ GL+
Sbjct: 795 SLICGLV 801



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 249/521 (47%), Gaps = 17/521 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+  I   L  +G L      L  MK+ G+V N  TYN LV    K G+ +EA+ V  +M
Sbjct: 162 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 221

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             +  +P V TY++L+  +     +E    L +EME+  + P+V +Y   I    ++ R 
Sbjct: 222 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 281

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA++++ +++  G KP+ +TH ++I+  C  G+I  A  +   M+++   PD VTY TL
Sbjct: 282 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 341

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D     G+ +    + + M   G   N +    ++  LC   ++ EA  + +   ++G 
Sbjct: 342 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 401

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
             ++ SY +LI+G+ + ++   AL+L+  M      P+ +T+   I    +SG++ +AI 
Sbjct: 402 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 461

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
               +   G++PD    N ++ G    G++  A +  +++      PD +T  +++    
Sbjct: 462 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 521

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +    ++A+K F   I      D +  N+LI +L K  R ++A+ +  +++E  L P   
Sbjct: 522 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 581

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   L   G+++E             + H + +   S  P    P+ I+Y+  ++ 
Sbjct: 582 TYNTLLAGLGREGKVKE-------------VMHLLEEMYHSNYP----PNLITYNTILDC 624

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C  G   DAL +      KG   + S+Y  ++ GL+K  +
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 665



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 244/527 (46%), Gaps = 21/527 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G +PD V  N +L  L K G+L   + +  ++K  G+ P+  TY +++    K   
Sbjct: 466 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASK 525

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+++   M +N  +PDV   N LI+    AG  +EA+R+  +++ + L P   TYNT
Sbjct: 526 FDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT 585

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+      G+  E   L++E+      PN +T+N ++   CK G ++ A  ++ +M   G
Sbjct: 586 LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 645

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA- 239
             PD  +YNT+I    K     EAF +   M +K L  +  TL TIL +      + EA 
Sbjct: 646 CIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEAL 704

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           +++ +   + G   D  S  +L+ G  +     ++++  + +    I    F    +I  
Sbjct: 705 HIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKH 764

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  K  +A +++ +    G+      +N++I G   E  ++ A     +M E    PD
Sbjct: 765 LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 824

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
             T N+LL  + +   +E+ LK       KG     VTYNT+IS L K RRLE A  L  
Sbjct: 825 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 884

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETG-KINHQVVQPNTSKTPEEI 478
            +  +   P   TY  +   L+++GR+E+A+   + M+E G K N  +            
Sbjct: 885 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI------------ 932

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
                 Y+  +N H   G  +    +F++   +GI  +  +Y  +++
Sbjct: 933 ------YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/435 (22%), Positives = 170/435 (39%), Gaps = 55/435 (12%)

Query: 86  LINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHG 145
           L+ G    G + E F +   M+   +  +V T+  +       G    A   +  + E G
Sbjct: 134 LMRGHGRVGDMAEVFDV---MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 190

Query: 146 IKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAF 205
           I  NA T+N ++ +  K G   +A ++ R M  +G  P   TY+ L+ A  K  ++E   
Sbjct: 191 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
            ++  M   G+K N  +    +  L   K+ DEAY +L                      
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA--------------------- 289

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
                         +M+     P   T+  +I  L  +G+   A D+  ++ +S   PD 
Sbjct: 290 --------------KMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 335

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T+ T++  F   G  +  ++  N M    +  ++V    ++  LC+ G + +AL+ F  
Sbjct: 336 VTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 395

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              KG   +  +YN+LIS   K  R  DA  L   M+     P+ YT+        +SG 
Sbjct: 396 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 455

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIF 505
             +A +   +M   G                 I P  ++ +  +      GR   A ++F
Sbjct: 456 SIKAIQRYELMKSKG-----------------IVPDVVAGNAVLFGLAKSGRLGMAKRVF 498

Query: 506 EETRQKGIAINKSTY 520
            E +  G++ +  TY
Sbjct: 499 HELKAMGVSPDTITY 513


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 235/509 (46%), Gaps = 39/509 (7%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKL-GWLKEAM 65
           LP     N +LD L K  +     +L  +M ++GLVP+  TYN L++  C+  G + +A 
Sbjct: 148 LPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINA-CRFQGTVAKAQ 206

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
            V D M   +  P+V TY  +I   C  G + +A RL   M+   + P+  TYN L++  
Sbjct: 207 EVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGH 266

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +      A  L  EL + G+ PNAV    +I  +CK  +  +A  +   M   G +P  
Sbjct: 267 CQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTV 326

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
             YN+L+D   ++GN +EA  +   M R GL  +  T + ++  LC   ++  A   L  
Sbjct: 327 PVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQG 386

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             + G  L+  +Y  LI  Y R      AL     M E  I P+  +Y+++I G S+ GK
Sbjct: 387 VQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGK 446

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A+ +  E++  G+ P+  T+  +IHG    G ++ A + H +M+E    P+ +T ++
Sbjct: 447 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSV 506

Query: 366 LLSGLCREGILEKALKFFRSWI-LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
           L+ GLCRE  +++A++F   +  LK   + SV  N  I                   EE+
Sbjct: 507 LVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTI-------------------EEE 547

Query: 425 KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
            L P+   Y  +   L   G+  EA K  S M ++G I                 P S +
Sbjct: 548 CLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMI-----------------PDSFT 590

Query: 485 YSEKINEHCSQGRYKDALQIFEETRQKGI 513
           Y+  I   C  G   +A+ ++ +  + G+
Sbjct: 591 YTLLIRGQCMLGYVLNAMMLYADMMKIGV 619



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 7/479 (1%)

Query: 50  ILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESL 109
           +LV    ++G L EA+ V   +   ++LP +   N +++G   A     A+ L  EM   
Sbjct: 124 VLVIALSQMGLLDEALYVFRRL---RTLPALPACNAVLDGLVKARRPGCAWELFDEMLRR 180

Query: 110 KLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKA 169
            L+P VVTYNTLIN     G   +A ++ D++    I PN VT+  MI   C+EG I  A
Sbjct: 181 GLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDA 240

Query: 170 CKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHT 229
            ++   M+E G  P+  TYN L+  +C+  ++  A  +   + + GL  N +   T++  
Sbjct: 241 ERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDG 300

Query: 230 LCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPS 289
            C  K+  EA  +     + G       Y +L+ G FR   A  AL L+ EM    + P 
Sbjct: 301 FCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPD 360

Query: 290 TFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHN 349
            FT + ++ GL   G+   A   L  + + G+  +   +N +I  +C  G +E+AL    
Sbjct: 361 EFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCT 420

Query: 350 KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKER 409
           +M E   +P++V+ + L+ G  + G ++ A+  +   + KG   + VTY  LI    K  
Sbjct: 421 RMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 480

Query: 410 RLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQP 469
            ++ AF L  EM E  + P+  T + +   L    R++EA +F  +M  +G     +   
Sbjct: 481 GIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRF--VMEYSGLKCSDIHSV 538

Query: 470 NTSKTPEE--IDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            ++ T EE  + P+S+ Y   I      G++ +A ++F   R+ G+  +  TY  L+ G
Sbjct: 539 FSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRG 597



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 214/444 (48%), Gaps = 17/444 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           G +P  VTYNT+++A   +G + + +++   M  Q + PN  TY  ++   C+ G + +A
Sbjct: 181 GLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDA 240

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
            R+ D M +    P+ +TYN+L++G C    +  A  L +E+    L P+ V + TLI+ 
Sbjct: 241 ERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDG 300

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
           F ++ R  EA  +  E+   G+ P    +N ++    + G   +A  + + M   G  PD
Sbjct: 301 FCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPD 360

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             T + ++   C  G M  A R +  +   G+ +N    N ++   C    L+EA     
Sbjct: 361 EFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCT 420

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
             ++ G   + VSY +LI G+ +  K   A+ ++ EM  + I P+  TY A+I G +++G
Sbjct: 421 RMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 480

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQF------------HN--- 349
             + A  +  E++++G+ P+  T + ++ G C E +V++A++F            H+   
Sbjct: 481 GIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFS 540

Query: 350 --KMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCK 407
              + E+   P+ V    L+ GL  +G   +A K F      G   DS TY  LI   C 
Sbjct: 541 NFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCM 600

Query: 408 ERRLEDAFGLLSEMEEKKLGPDRY 431
              + +A  L ++M +  + P RY
Sbjct: 601 LGYVLNAMMLYADMMKIGVKPTRY 624



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 204/454 (44%), Gaps = 56/454 (12%)

Query: 85  MLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEH 144
           +L+      G+L+EA  + + + +L  LP     N +++   ++ R   A++L DE    
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLRTLPALPAC---NAVLDGLVKARRPGCAWELFDE---- 176

Query: 145 GIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEA 204
                                          M   G  P  VTYNTLI+A    G + +A
Sbjct: 177 -------------------------------MLRRGLVPSVVTYNTLINACRFQGTVAKA 205

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
             + D M  + +  N +T  T++  LC E  + +A  L ++  + G   ++ +Y  L++G
Sbjct: 206 QEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSG 265

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
           + + +  N A+ L+ E+ +  + P+   +  +I G  ++ +  +A  M  E+ + G+ P 
Sbjct: 266 HCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPT 325

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
              +N+++ G    G  ++AL  + +M      PD  TC+I++ GLC  G +  A +F +
Sbjct: 326 VPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQ 385

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
                G  +++  YN LI   C+   LE+A    + M E  + P+  +Y+++     + G
Sbjct: 386 GVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRG 445

Query: 445 RLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQI 504
           +++ A    + MV  G                 I+P+ ++Y+  I+ H   G    A ++
Sbjct: 446 KMQIAMAIYTEMVAKG-----------------IEPNVVTYTALIHGHAKNGGIDAAFRL 488

Query: 505 FEETRQKGIAINKSTYMNLMNGLIKRRKSISKAV 538
            +E  + GI+ N  T   L++GL  R   + +AV
Sbjct: 489 HKEMIENGISPNAITVSVLVDGLC-RENRVQEAV 521


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 212/400 (53%), Gaps = 11/400 (2%)

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
           L+ QN + P++  +N ++     +        L ++ME   + P++V  N LIN F + G
Sbjct: 53  LLQQNPTPPNI-EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLG 111

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKI-DKAC---------KIVRNMEEN 179
               AF ++ ++ + G KPN +T N +IK  C  GKI DK C          +   M   
Sbjct: 112 HIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILE 171

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
             +PD  T+  L+D  CK G ++EA  ++ +M  +G+K   +T N+++      K++++A
Sbjct: 172 NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKA 231

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
             + N+ ++ G   D  SY  LI G+ + +  + A++L  EM  +QI+P+  TY+++I G
Sbjct: 232 KSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDG 291

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +SGK   A+ +++E+   G  P+  T+++I+   C   QV+ A+    +M  +  +P+
Sbjct: 292 LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPN 351

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLS 419
           + T  IL+ GLC+ G LE A K F   ++KG  ++  TY  +I   C +   ++A  LLS
Sbjct: 352 MYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLS 411

Query: 420 EMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           +ME+    P+  TY  I  +L +    E A+K    M+ET
Sbjct: 412 KMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIET 451



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 193/376 (51%), Gaps = 10/376 (2%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P N+ +N IL +L K    + V  L   M+ +G+ PN    NIL++ +C+LG +  A  V
Sbjct: 60  PPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSV 119

Query: 68  VDLMTQNKSLPDVWTYNMLINGW----------CNAGMLEEAFRLRKEMESLKLLPDVVT 117
           +  + +    P+  T N LI G           C  G L++A  L  +M    + PDV T
Sbjct: 120 LTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYT 179

Query: 118 YNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNME 177
           +  L++ F + GR  EA  ++  +   GIKP  VT+N ++  Y    +++KA  I   M 
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239

Query: 178 ENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLD 237
           + G SPD  +Y+ LI+  CK   M+EA  ++  M  K +  N +T ++++  LC   K+ 
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299

Query: 238 EAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMI 297
            A  L++    RG   + V+Y +++    ++ + + A+ L  +MK + I P+ +TY  +I
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359

Query: 298 WGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFK 357
            GL QSGK E A  +  +LL  G   +  T+  +I GFC +G  ++AL   +KM +    
Sbjct: 360 KGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419

Query: 358 PDIVTCNILLSGLCRE 373
           P+  T  I++  L ++
Sbjct: 420 PNAKTYEIIILSLFKK 435



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 201/384 (52%), Gaps = 10/384 (2%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSG------ 54
           ME  G  P+ V  N ++++  + G +     +L+ + K G  PN  T N L+ G      
Sbjct: 88  MEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK 147

Query: 55  ----YCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLK 110
               +C +G LK+A+ + + M      PDV+T+ +L++G+C  G ++EA  +   M    
Sbjct: 148 IHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG 207

Query: 111 LLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKAC 170
           + P VVTYN+L++ +F   +  +A  + + + + G+ P+  +++I+I  +CK   +D+A 
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAM 267

Query: 171 KIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTL 230
           ++++ M      P+ VTY++LID  CK+G +  A +++D M  +G   N +T ++IL  L
Sbjct: 268 ELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 327

Query: 231 CCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPST 290
           C   ++D A  LL     +G   +  +Y  LI G  +  K   A K+++++  +    + 
Sbjct: 328 CKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNV 387

Query: 291 FTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNK 350
           +TY  MI G    G  ++A+ +L+++  +G IP+  T+  II     + + E A +   +
Sbjct: 388 YTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCE 447

Query: 351 MVEKSFKPDIVTCNILLSGLCREG 374
           M+E +F   +   N L++ +   G
Sbjct: 448 MIETNFDGRVALTNDLIASIWVTG 471



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 204/428 (47%), Gaps = 29/428 (6%)

Query: 114 DVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIV 173
           + + Y +    F  +    +A  L + L +    P  +  N ++    K         + 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 174 RNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCE 233
           + ME  G  P+ V  N LI++ C+ G++  AF ++  + + G K NTITLNT++  LC  
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 234 ----------KKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKE 283
                      KL +A  L N         D  ++  L+ G+ ++ +   A  +   M  
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 284 RQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEK 343
           + I P   TYN+++ G     +  +A  + N + Q G+ PD  +++ +I+GFC    +++
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 344 ALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLIS 403
           A++   +M  K   P++VT + L+ GLC+ G +  ALK       +G+  + VTY++++ 
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325

Query: 404 SLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK-FTSIMVETGKI 462
           +LCK  ++++A  LL++M+ + + P+ YTY  +   L +SG+LE+A+K F  ++V+   +
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
           N                    +Y+  I   C +G + +AL +  +    G   N  TY  
Sbjct: 386 N------------------VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEI 427

Query: 523 LMNGLIKR 530
           ++  L K+
Sbjct: 428 IILSLFKK 435



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 169/367 (46%), Gaps = 42/367 (11%)

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +D A  +   + +   +P  + +N ++ +  K+ +      +   M  +G+K N +  N 
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
           ++++ C    +  A+ +L    K GY  + ++  TLI G          L L  ++ ++ 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKG----------LCLNGKIHDKH 152

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKAL 345
            +                GK + A+D+ N+++   + PD  TF  ++ GFC EG+V++A 
Sbjct: 153 CI---------------VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAK 197

Query: 346 QFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSL 405
                M+ +  KP +VT N L+ G      + KA   F +    G + D  +Y+ LI+  
Sbjct: 198 NVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGF 257

Query: 406 CKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQ 465
           CK + +++A  LL EM  K++ P+  TY+++   L +SG++  A K    M + G     
Sbjct: 258 CKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG----- 312

Query: 466 VVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
             QP          P+ ++YS  ++  C   +  +A+ +  + + +GI  N  TY  L+ 
Sbjct: 313 --QP----------PNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIK 360

Query: 526 GLIKRRK 532
           GL +  K
Sbjct: 361 GLCQSGK 367



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 60/131 (45%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  G  P+  TY  ++  L + GKL + R +  D+  +G   N  TY +++ G+C  G 
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             EA+ ++  M  N  +P+  TY ++I         E A +L  EM        V   N 
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTND 462

Query: 121 LINRFFESGRS 131
           LI   + +G S
Sbjct: 463 LIASIWVTGSS 473


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 241/471 (51%), Gaps = 18/471 (3%)

Query: 27  NEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNML 86
           +  R ++  M ++G+      +  L+  Y + G L+ AMRV+ LM ++   PD+   NM 
Sbjct: 144 DPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMA 203

Query: 87  INGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGI 146
           +N    AG +++A    + M  + + PDV TYN LI     + R ++A ++I  + ++G 
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN-GFSPDCVTYNTLIDANCKAGNMEEAF 205
            P+ +++  ++ + CKE ++++   +++ M  + G  PD VTYN LI    K G+ +EA 
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323

Query: 206 RMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGY 265
             +     K  +++ +  + I+H+ C   ++ EA  ++     +G   D V+Y T++ G+
Sbjct: 324 EFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383

Query: 266 FRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDE 325
            R  + ++A K+   M +    P+T T+ A++ GL + GKT +A ++LN+  +    P +
Sbjct: 384 CRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSD 443

Query: 326 TTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRS 385
            T++ ++HGF  EG+++++     +M++K F P  V  N+L+  LC++    +A  F   
Sbjct: 444 ITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQ 503

Query: 386 WILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGR 445
              KG  ++ V + T+I    ++  LE A  L+ +M      PD  TY  +  AL + GR
Sbjct: 504 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGR 563

Query: 446 LEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
           L+EA      M+  G                 + P+ ++Y   I+ +C +G
Sbjct: 564 LKEATGLVEKMLNRG-----------------VLPTPVTYRTVIHRYCEKG 597



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 212/409 (51%), Gaps = 1/409 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M+  GC PD    N  ++ L   G++++  +    M++ G+ P+  TYN L+ G C    
Sbjct: 188 MQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARR 247

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMES-LKLLPDVVTYN 119
           + +AM ++ +M QN   PD  +Y  +++  C    +EE   L + M +   L PD VTYN
Sbjct: 248 VVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYN 307

Query: 120 TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
            LI+   + G + EA + + E +    + + V ++ ++  +C  G++ +A +IV  M   
Sbjct: 308 VLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISK 367

Query: 180 GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
           G  PD VTY+T++D  C+ G +++A +MM  M +   K NT+T   +L+ LC   K  EA
Sbjct: 368 GCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEA 427

Query: 240 YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWG 299
           + LLN + +  +   +++Y  ++ G+ R+ K   +  +  +M ++   P+T   N +I  
Sbjct: 428 WELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHA 487

Query: 300 LSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPD 359
           L +  K  +A D + +    G   +   F T+IHGF  +G +E AL   + M   +  PD
Sbjct: 488 LCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPD 547

Query: 360 IVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKE 408
           +VT  +++  L ++G L++A       + +G     VTY T+I   C++
Sbjct: 548 VVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEK 596



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQ-GLVPNRTTYNILVSGYCKLGWLKE 63
           GC PD ++Y T++  L K+ ++ EVR LL  M+   GL P++ TYN+L+ G  K G   E
Sbjct: 262 GCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADE 321

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A+  +      +   D   Y+ +++ +C  G + EA  +  EM S    PDVVTY+T+++
Sbjct: 322 ALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVD 381

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
            F   G   +A K++  + ++  KPN VTH  ++   CK GK  +A +++   EE  ++P
Sbjct: 382 GFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTP 441

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
             +TY+ ++    + G ++E+  ++  M +KG    T+ +N ++H LC ++K  EA   +
Sbjct: 442 SDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFM 501

Query: 244 NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                +G  ++ V++ T+I G+ R      AL L D+M      P   TY  ++  L + 
Sbjct: 502 EQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKK 561

Query: 304 GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
           G+ ++A  ++ ++L  G++P   T+ T+IH +C +G +E  L    KM+ +         
Sbjct: 562 GRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAY-- 619

Query: 364 NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
           N ++  LC  G L +A       +      D+ T + L+ S         A+ +   M  
Sbjct: 620 NQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFR 679

Query: 424 KKLGPD 429
           + L PD
Sbjct: 680 RNLIPD 685



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 210/463 (45%), Gaps = 18/463 (3%)

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A RVV LM +         +  L+  +  AG L  A R+   M+     PD+   N  +N
Sbjct: 146 ARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVN 205

Query: 124 RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               +GR  +A +  + +   G++P+  T+N +IK  C   ++  A +++  M +NG  P
Sbjct: 206 VLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 265

Query: 184 DCVTYNTLIDANCKAGNMEEAFRMMDVM-GRKGLKMNTITLNTILHTLCCEKKLDEAYML 242
           D ++Y T++   CK   +EE   ++  M    GL  + +T N ++H L      DEA   
Sbjct: 266 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325

Query: 243 LNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQ 302
           L  +  + + +DEV Y  ++  +  + +   A ++  EM  +   P   TY+ ++ G  +
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCR 385

Query: 303 SGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVT 362
            G+ +QA  M+  + ++   P+  T   +++G C  G+  +A +  NK  E+ + P  +T
Sbjct: 386 IGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDIT 445

Query: 363 CNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEME 422
            ++++ G  REG L+++       + KG    +V  N LI +LCK+R+  +A   + + +
Sbjct: 446 YSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQ 505

Query: 423 EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSS 482
            K    +   +  +       G LE A      M  + +                  P  
Sbjct: 506 SKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNR-----------------HPDV 548

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMN 525
           ++Y+  ++    +GR K+A  + E+   +G+     TY  +++
Sbjct: 549 VTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIH 591



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 161/350 (46%), Gaps = 19/350 (5%)

Query: 202 EEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTL 261
           + A R++ +M R+G++  T     ++ +     KL  A  +L+   K G   D       
Sbjct: 144 DPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMA 203

Query: 262 ITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGM 321
           +       + ++AL+  + M+   + P  +TYN +I GL  + +   A++M+  +LQ+G 
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 322 IPDETTFNTIIHGFCSEGQVEKALQFHNKMV-EKSFKPDIVTCNILLSGLCREGILEKAL 380
            PD+ ++ T++   C E +VE+      +M  +    PD VT N+L+ GL + G  ++AL
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323

Query: 381 KFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTAL 440
           +F R    K   VD V Y+ ++ S C   R+ +A  ++ EM  K   PD  TY+ +    
Sbjct: 324 EFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383

Query: 441 VESGRLEEAQKFTSIM----------VETGKINHQVVQPNTSKTPEEID--------PSS 482
              G L++A+K    M            T  +N       TS+  E ++        PS 
Sbjct: 384 CRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSD 443

Query: 483 ISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           I+YS  ++    +G+ K++  +  +  QKG          L++ L K RK
Sbjct: 444 ITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRK 493



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKE 63
           G LP  VTY T++    +KG L ++ +LL  M  +Q +   ++ YN +V   C  G L E
Sbjct: 578 GVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM---KSAYNQVVEKLCAFGKLNE 634

Query: 64  AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
           A  ++  + +  S+ D  T ++L+  + N G+  +A+ +   M    L+PDV     + N
Sbjct: 635 AYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDN 694

Query: 124 RFFESGRSMEAFKLIDELDEHGI 146
           +           KL+ +  E G+
Sbjct: 695 QLASEKNKPVPGKLMVKFAERGL 717



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 22/199 (11%)

Query: 337 SEGQVEKALQFH---NKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
           + G V +A +F    ++       P++   + +LS L    + + A +  R  I +G   
Sbjct: 103 ARGDVRRAFEFFRWADRQWRYRHAPEVF--DEMLSLLSNTRLHDPARRVVRLMIRRGVRR 160

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
            +  +  L+ S  +  +L  A  +L  M++    PD          LV +GR+++A +F 
Sbjct: 161 GTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFA 220

Query: 454 SIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGI 513
             M   G                 ++P   +Y+  I   C   R  DA+++     Q G 
Sbjct: 221 ERMRRVG-----------------VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 514 AINKSTYMNLMNGLIKRRK 532
             +K +Y  +M+ L K ++
Sbjct: 264 PPDKISYYTVMSFLCKEKR 282


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 216/434 (49%), Gaps = 15/434 (3%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC PD+VTY TI+  L K  +L+E  ++L+ M      P   +YN +V   C+   ++E 
Sbjct: 166 GCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEV 220

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
             VV  M      P+V TY  +++ +C AG L  A  +   M      P+VVT+  L+  
Sbjct: 221 FSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRG 280

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
            F+ GR  +A  +   +   G  P+ V++NI+I+  C  G +  A  I+ +ME++G  P+
Sbjct: 281 LFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 340

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             TY+TLID   KAG++  A  + + M R G K N +    ++   C +   ++A  L++
Sbjct: 341 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 400

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                    + V++ TLI       +  RAL ++ EM+    +P+  TYN +I GL + G
Sbjct: 401 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 460

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
               A+ M+ E+   G+     T+NT++ G C      +A+ F  KM+ +  +P+  T +
Sbjct: 461 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFS 520

Query: 365 ILLSGLCREGILEKALKFFRSWILKGKAV-----DSVTYNTLISSLCKERRLEDAFGLLS 419
            ++   C+EG +  A     +W+L    V     + + Y  L++ LC + +L DA   L 
Sbjct: 521 AIIHAYCKEGEVRMA-----AWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 575

Query: 420 EMEEKKLGPDRYTY 433
           +M  + + P+  T+
Sbjct: 576 KMLYEGIYPNTVTW 589



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 215/453 (47%), Gaps = 11/453 (2%)

Query: 19  ALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLP 78
           AL +  ++   R +L +M ++G  P+  TY  +VS  CKL  L EA  V+  M      P
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----P 199

Query: 79  DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
              +YN ++   C    ++E F +  +M    L P+V+TY T+++ F ++G    A  ++
Sbjct: 200 VAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAIL 259

Query: 139 DELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKA 198
             +   G  PN VT   +++    +G++  A  + R M   G++P  V+YN LI   C  
Sbjct: 260 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 319

Query: 199 GNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSY 258
           G+++ A  +++ M + G   N  T +T++        L  A  + N  S+ G   + V Y
Sbjct: 320 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 379

Query: 259 GTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQ 318
             ++  + +    N+A  L D+M      P+T T+N +I  L    +  +A+ + +E+ +
Sbjct: 380 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 439

Query: 319 SGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEK 378
            G +P+  T+N +IHG   EG    AL    +M     +  +VT N ++SGLC+  +  +
Sbjct: 440 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 499

Query: 379 ALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHT 438
           A+ F    I++G   ++ T++ +I + CKE  +  A  +L  M       +   Y  +  
Sbjct: 500 AMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMA 559

Query: 439 ALVESGRLEEAQKFTSIMVETGKINHQVVQPNT 471
            L    +L +A  +   M+  G      + PNT
Sbjct: 560 ELCNQDKLVDAMTYLLKMLYEG------IYPNT 586



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 217/487 (44%), Gaps = 22/487 (4%)

Query: 43  PNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRL 102
           P+R          C+   +  A +++D M +    PD  TY  +++  C    L+EA  +
Sbjct: 134 PHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 193

Query: 103 RKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK 162
              M      P   +YN ++       R  E F ++ ++   G++PN +T+  ++  +CK
Sbjct: 194 LAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCK 248

Query: 163 EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
            G++  AC I+  M   G +P+ VT+  L+      G + +A  M   M  +G   +T++
Sbjct: 249 AGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVS 308

Query: 223 LNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMK 282
            N ++  LC    L  A  +LNS  + G + +  +Y TLI G+ +      A+ +W++M 
Sbjct: 309 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 368

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
                P+   Y  M+    +     QA  +++++L     P+  TFNT+I   C   +V 
Sbjct: 369 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 428

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL   ++M      P+  T N L+ GL REG    AL         G  +  VTYNT++
Sbjct: 429 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 488

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
           S LC+ R   +A   + +M  + + P+ +T++AI  A  + G +  A      M      
Sbjct: 489 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAM------ 542

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                  N       I    + Y+  + E C+Q +  DA+    +   +GI  N  T+  
Sbjct: 543 -------NVVNCHRNI----LVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 591

Query: 523 LMNGLIK 529
           L+ G+ +
Sbjct: 592 LVRGVFR 598



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 184/380 (48%), Gaps = 1/380 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G  P+ +TY TI+DA  K G+L     +L+ M   G  PN  T+  LV G    G 
Sbjct: 227 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 286

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A+ +   M      P   +YN+LI G C+ G L+ A  +   ME     P+V TY+T
Sbjct: 287 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 346

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI+ F ++G    A  + +++   G KPN V +  M+  +CK+   ++A  ++  M    
Sbjct: 347 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 406

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+NTLI + C    +  A  +   M R G   N  T N ++H L  E    +A 
Sbjct: 407 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 466

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            ++      G  L  V+Y T+++G  +   +  A+    +M  + I P+ FT++A+I   
Sbjct: 467 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 526

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            + G+   A  ML  +       +   +  ++   C++ ++  A+ +  KM+ +   P+ 
Sbjct: 527 CKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNT 586

Query: 361 VTCNILLSGLCRE-GILEKA 379
           VT N+L+ G+ R  G +E +
Sbjct: 587 VTWNVLVRGVFRNLGCIEPS 606



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 181/407 (44%), Gaps = 57/407 (14%)

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           ++ R   A K++DE+   G  P+ VT+  ++   CK  ++D+A +++  M      P   
Sbjct: 148 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAA 202

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           +YN ++ A C+   M+E F ++  M  +GL+ N IT  TI+   C   +L  A  +L   
Sbjct: 203 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 262

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
              G   + V++  L+ G F D + + AL +W  M      PST +YN +I GL   G  
Sbjct: 263 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 322

Query: 307 EQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNIL 366
           + A  +LN + Q G  P+  T++T+I GF   G +  A+   N M     KP++V    +
Sbjct: 323 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 382

Query: 367 LSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKL 426
           +   C++ +  +A       +L+    ++VT+NTLI SLC  RR+  A G+  EM     
Sbjct: 383 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR--- 439

Query: 427 GPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYS 486
                                                H  V            P+  +Y+
Sbjct: 440 -------------------------------------HGCV------------PNGRTYN 450

Query: 487 EKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
           E I+    +G   DAL +  E +  GI ++  TY  +++GL + R S
Sbjct: 451 ELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 497



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 60/131 (45%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTYNT++  L +     E    +  M  QG+ PN  T++ ++  YCK G ++ A  ++  
Sbjct: 482 VTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGA 541

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGR 130
           M       ++  Y +L+   CN   L +A     +M    + P+ VT+N L+   F +  
Sbjct: 542 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 601

Query: 131 SMEAFKLIDEL 141
            +E    I  +
Sbjct: 602 CIEPSDFIQHI 612


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 206/423 (48%), Gaps = 6/423 (1%)

Query: 20  LFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPD 79
           + + G  N+   L  +   Q L  +  TYN+L+ G+C    L  A  ++  M       +
Sbjct: 1   MVRAGSHNQALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 80  VWTYNMLINGWCNAGMLEEAF-RLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLI 138
             T ++++ G C  G + +A       +E     PDVV+Y TLIN   + GR   AF L 
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 139 DEL-DEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCK 197
            ++    G +PNA T+N ++   CK+ ++D A  ++    +  F+PD VTYNTL+ A  +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 198 AGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVS 257
            G ++EA      M  +G     ++ N I+  LC  ++L +A  + N    R ++ + V+
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 258 YGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELL 317
           Y  +I G  + ++ + A +L D M      P    Y  ++ G S +G+ + A+ +L  ++
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299

Query: 318 QSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILE 377
             G IPD  T+  +I   C  G+V+ A +   ++V     P++VT + L+ G CR   ++
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359

Query: 378 KALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIH 437
           +  K  R    +      VTYNT+I  L    R E+A+G+  EM E    PD  TY  + 
Sbjct: 360 EGGKVMREMACRPNV---VTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLK 416

Query: 438 TAL 440
            AL
Sbjct: 417 RAL 419



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 216/437 (49%), Gaps = 23/437 (5%)

Query: 93  AGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVT 152
           AG   +A +L +E    +L    VTYN LI  F  +     AF L+ E+D  G++ N  T
Sbjct: 4   AGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRT 62

Query: 153 HNIMIKWYCKEGKIDKACK-IVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVM 211
            +I+++  C+ G++ +A +    ++E     PD V+Y TLI+  CK G ++ AF +   M
Sbjct: 63  TSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKM 122

Query: 212 -GRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
               G + N  T N ++  LC + +LD A  ++  A KR +  D V+Y TL+   F+  +
Sbjct: 123 VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGR 182

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
            + AL  + +M E   +P+  ++NA+I GL ++ +   A+++ NE++     P+  T++ 
Sbjct: 183 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 242

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I G C   Q+++A Q  ++MV +  +PD+V    L+ G    G L+ AL   R  + +G
Sbjct: 243 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 302

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
              D VTY  +I  LCK  R++DA  +  E+   K  P+  TY+A+      + R++E  
Sbjct: 303 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG- 361

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQ 510
                    GK+  ++             P+ ++Y+  I       R ++A  +F E  +
Sbjct: 362 ---------GKVMREMA----------CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 402

Query: 511 KGIAINKSTYMNLMNGL 527
            G   +  TY  L   L
Sbjct: 403 CGFVPDARTYRGLKRAL 419



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 160/322 (49%), Gaps = 4/322 (1%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDM-KKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           PD V+Y T+++ L K G+++   DL   M    G  PN  TYN LV G CK   L  A  
Sbjct: 94  PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARA 153

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           V+    +    PDV TYN L+      G ++EA     +M     +P +V++N +I    
Sbjct: 154 VITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLC 213

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
            + R  +A ++ +E+ +    PN VT++++I   CK  ++D+A +++  M   G  PD V
Sbjct: 214 RARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLV 273

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
            Y  L+     AG ++ A  ++  M  +G   + +T   ++  LC   ++D+A+ +    
Sbjct: 274 AYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL 333

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
                  + V+Y  LI GY R  + +   K+  EM  R   P+  TYN MIWGLS   + 
Sbjct: 334 VANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRN 390

Query: 307 EQAIDMLNELLQSGMIPDETTF 328
           E+A  M  E+ + G +PD  T+
Sbjct: 391 EEAYGMFREMSECGFVPDARTY 412



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 133/260 (51%), Gaps = 20/260 (7%)

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
           N+AL+L+ E    Q+  S+ TYN +I G   +   + A  +L E+   GM  ++ T + I
Sbjct: 8   NQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSII 66

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSF-KPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           + G C  G+V +AL+  +  +E +  +PD+V+   L++GLC+ G ++ A   FR  +  G
Sbjct: 67  LQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAG 126

Query: 391 KA-VDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA 449
               ++ TYN L+  LCK+ RL+ A  +++E  ++   PD  TY  +  AL + GR++EA
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186

Query: 450 QKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETR 509
               + M E G +                 P+ +S++  I   C   R  DAL++F E  
Sbjct: 187 LATFTQMTEEGYV-----------------PTLVSFNAIITGLCRARRLADALEVFNEMI 229

Query: 510 QKGIAINKSTYMNLMNGLIK 529
            +    N  TY  +++GL K
Sbjct: 230 DRDFHPNLVTYSVVIDGLCK 249


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 253/545 (46%), Gaps = 68/545 (12%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           V++NT++    + G+L +   +L   +  G   N  TY  L+ GYC+ G L +A+R++  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 71  MTQNKSLPDVWTYNMLINGWCNA-----------------------------------GM 95
           M      PD +TYN ++ G C A                                   G+
Sbjct: 184 M---PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNI 155
           L+ A +L  +M      PDVV Y+TLIN F E G   +A  L++ +     KPN V +N 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---LCKPNTVCYNA 297

Query: 156 MIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKG 215
            +K  C   + +   +++  M   G SP+  T++ LI + C+   ++ A  +++ M + G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 216 LKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRAL 275
            + +T+  N I+++L    ++D+A  LLNS   +    D + +  ++ G+ R E+ + A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKP---DALGFNAVLKGFCRAERWHDAS 414

Query: 276 KLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGF 335
           +L  +M          T+N +I  L Q+G    A  +  ++ +    PD  T++++++GF
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 336 CSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDS 395
             +G VE A+Q    M     KPDI + N +L GLCR    E A +     + K    + 
Sbjct: 475 SEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 396 VTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSI 455
           VT+N LI+SLC++  ++ A  +L +M      PD +TY A+     E GRL++A K  S 
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLST 591

Query: 456 MVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAI 515
           M                       P +ISY+  +   C   R++DA ++  E  +     
Sbjct: 592 M--------------------SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTP 631

Query: 516 NKSTY 520
           N+ T+
Sbjct: 632 NEVTF 636



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 253/519 (48%), Gaps = 62/519 (11%)

Query: 46  TTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKE 105
            ++N LV+GYC+ G L +A RV+    +     +V TY  LI+G+C +G L++A RL   
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLG-AARATGAANVVTYTALIDGYCRSGRLDDALRL--- 180

Query: 106 MESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGK 165
           + S+ + PD  TYNT++     + +  EA +L+ E+  +   PN VT    I+ +C+ G 
Sbjct: 181 IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 166 IDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNT 225
           +D+A +++  M   G +PD V Y+TLI+   + G++++A  +++ M     K NT+  N 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---LCKPNTVCYNA 297

Query: 226 ILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ 285
            L  LC  ++ ++   L+    ++G   +E ++  LI+   ++   + A+++ ++M++  
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 286 IMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL---------------------------LQ 318
             P T  YN +I  LS+ G+ + A+ +LN +                           L 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELI 417

Query: 319 SGMIPD-----ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCRE 373
           + M  D     E TFN +I   C  G V  A Q   +M      PDIVT + LL+G   +
Sbjct: 418 AQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQ 477

Query: 374 GILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTY 433
           G++E A++ FRS   K    D  +YN ++  LC+  R EDA  L++EM  K   P+  T+
Sbjct: 478 GLVEVAIQLFRSMPCKP---DIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF 534

Query: 434 AAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHC 493
             +  +L + G ++ A +    M            PN   TP+       +Y+  IN   
Sbjct: 535 NILINSLCQKGLVDRAIEVLEQM------------PNYGSTPD-----IFTYNALINGFS 577

Query: 494 SQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            QGR  DAL++      K  AI   +Y + + GL +  +
Sbjct: 578 EQGRLDDALKLLSTMSCKPDAI---SYNSTLKGLCRAER 613



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 239/473 (50%), Gaps = 20/473 (4%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           PD  TYNT+L  L    K  E  +L+++M +    PN  T+   +  +C+ G L  A+++
Sbjct: 188 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 247

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           +D M +    PDV  Y+ LING+   G +++A  L   + ++   P+ V YN  +     
Sbjct: 248 LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGLCI 304

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           + R  +  +L+ E+   G  PN  T +++I   C+   +D A +++  ME+ G  PD V 
Sbjct: 305 AERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVN 364

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN +I++  + G +++A R+++ M     K + +  N +L   C  ++  +A  L+    
Sbjct: 365 YNIIINSLSERGRVDDALRLLNSM---VCKPDALGFNAVLKGFCRAERWHDASELIAQMF 421

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           +    L E+++  LI    ++   N A +++++M   +  P   TY++++ G S+ G  E
Sbjct: 422 RDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVE 481

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            AI +   +      PD  ++N ++ G C   + E A +   +MV K   P+ VT NIL+
Sbjct: 482 VAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILI 538

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
           + LC++G++++A++        G   D  TYN LI+   ++ RL+DA  LLS M  K   
Sbjct: 539 NSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK--- 595

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVE--------TGKINHQVVQPNTS 472
           PD  +Y +    L  + R ++A++  + M+         T K  + ++ PN +
Sbjct: 596 PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRA 648



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 220/428 (51%), Gaps = 12/428 (2%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C P+ VT+ T + +  + G L+    LL  M + G  P+   Y+ L++G+ + G + +A+
Sbjct: 221 CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 280

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
              DL+      P+   YN  + G C A   E+   L  EM      P+  T++ LI+  
Sbjct: 281 ---DLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 337

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            ++     A +++++++++G +P+ V +NI+I    + G++D A +++ +M      PD 
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDA 394

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           + +N ++   C+A    +A  ++  M R    +  +T N ++ TLC    ++ A  +   
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQ 454

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
             +     D V+Y +L+ G+        A++L+  M  +   P  F+YNA++ GL ++ +
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAAR 511

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            E A +++ E++     P+E TFN +I+  C +G V++A++   +M      PDI T N 
Sbjct: 512 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNA 571

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           L++G   +G L+ ALK   +   K    D+++YN+ +  LC+  R +DA  L++EM   K
Sbjct: 572 LINGFSEQGRLDDALKLLSTMSCKP---DAISYNSTLKGLCRAERWQDAEELVAEMLRNK 628

Query: 426 LGPDRYTY 433
             P+  T+
Sbjct: 629 CTPNEVTF 636



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 194/376 (51%), Gaps = 20/376 (5%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +GC PD V Y+T+++   ++G +++  DLL+ M  +   PN   YN  + G C    
Sbjct: 251 MPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAER 307

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++   ++  M +    P+  T++MLI+  C   +++ A  + ++ME     PD V YN 
Sbjct: 308 WEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNI 367

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +IN   E GR  +A +L++ +     KP+A+  N ++K +C+  +   A +++  M    
Sbjct: 368 IINSLSERGRVDDALRLLNSM---VCKPDALGFNAVLKGFCRAERWHDASELIAQM---- 420

Query: 181 FSPDC----VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKL 236
           F  DC    +T+N LID  C+ G +  A ++ + M R     + +T +++L+    +  +
Sbjct: 421 FRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLV 480

Query: 237 DEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAM 296
           + A  L  S   +    D  SY  ++ G  R  +   A +L  EM  +   P+  T+N +
Sbjct: 481 EVAIQLFRSMPCKP---DIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNIL 537

Query: 297 IWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSF 356
           I  L Q G  ++AI++L ++   G  PD  T+N +I+GF  +G+++ AL+  + M   S 
Sbjct: 538 INSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SC 594

Query: 357 KPDIVTCNILLSGLCR 372
           KPD ++ N  L GLCR
Sbjct: 595 KPDAISYNSTLKGLCR 610



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 215/480 (44%), Gaps = 62/480 (12%)

Query: 84  NMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE 143
           N+LI   C  G L +A R+   +++     D V++NTL+  +   GR  +A +++     
Sbjct: 94  NILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARA 152

Query: 144 HGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEE 203
            G   N VT+  +I  YC+ G++D A +++ +M     +PD  TYNT++   C A   EE
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEE 208

Query: 204 AFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLIT 263
           A  +M  M R     N +T  T + + C    LD A  LL+   + G   D V Y TLI 
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 264 GYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIP 323
           G+      ++AL L + M  +   P+T  YNA + GL  + + E   +++ E+++ G  P
Sbjct: 269 GFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 324 DETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFF 383
           +E TF+ +I   C    V+ A++   +M +   +PD V  NI+++ L   G ++ AL+  
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 384 RSWILKGKAVD--------------------------------SVTYNTLISSLCKERRL 411
            S + K  A+                                  +T+N LI +LC+   +
Sbjct: 386 NSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLV 445

Query: 412 EDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEA-QKFTSIMVETGKINHQVVQPN 470
             A  +  +M   +  PD  TY+++     E G +E A Q F S+  +            
Sbjct: 446 NYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK------------ 493

Query: 471 TSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
                    P   SY+  +   C   R++DA ++  E   K    N+ T+  L+N L ++
Sbjct: 494 ---------PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQK 544



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 168/329 (51%), Gaps = 9/329 (2%)

Query: 5   GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
           GC P+  T++ ++ +L +   ++   ++L  M+K G  P+   YNI+++   + G + +A
Sbjct: 322 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDA 381

Query: 65  MRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINR 124
           +R+++ M      PD   +N ++ G+C A    +A  L  +M         +T+N LI+ 
Sbjct: 382 LRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDT 438

Query: 125 FFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPD 184
             ++G    A ++ +++  +   P+ VT++ ++  + ++G ++ A ++ R+M      PD
Sbjct: 439 LCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPD 495

Query: 185 CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
             +YN ++   C+A   E+A  ++  M  K    N +T N ++++LC +  +D A  +L 
Sbjct: 496 IFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLE 555

Query: 245 SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                G   D  +Y  LI G+    + + ALKL   M  +   P   +YN+ + GL ++ 
Sbjct: 556 QMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAE 612

Query: 305 KTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           + + A +++ E+L++   P+E TF    H
Sbjct: 613 RWQDAEELVAEMLRNKCTPNEVTFKYANH 641



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 157/293 (53%), Gaps = 9/293 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME +GC PD V YN I+++L ++G++++   LL+ M  +   P+   +N ++ G+C+   
Sbjct: 353 MEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAER 409

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
             +A  ++  M ++       T+N+LI+  C  G++  A ++ ++M   +  PD+VTY++
Sbjct: 410 WHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSS 469

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           L+N F E G    A +L   +     KP+  ++N ++K  C+  + + A +++  M    
Sbjct: 470 LLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKD 526

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
             P+ VT+N LI++ C+ G ++ A  +++ M   G   +  T N +++    + +LD+A 
Sbjct: 527 CPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDAL 586

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
            LL++ S +    D +SY + + G  R E+   A +L  EM   +  P+  T+
Sbjct: 587 KLLSTMSCKP---DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 175/392 (44%), Gaps = 58/392 (14%)

Query: 186 VTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNS 245
           ++ N LI   C  G + +A R++D +       + ++ NT++   C + +L +A  +L +
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAA-AAADAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL----- 300
           A   G   + V+Y  LI GY R  + + AL+L   M    + P T+TYN ++ GL     
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKK 205

Query: 301 ------------------------------SQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
                                          Q+G  ++A+ +L+++ + G  PD   ++T
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I+GF  +G V++AL   N M+    KP+ V  N  L GLC     E   +     + KG
Sbjct: 266 LINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            + +  T++ LISSLC+   ++ A  +L +ME+    PD   Y  I  +L E GR+++A 
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL 382

Query: 451 KFTSIMV-ETGKINHQVVQPNTSKTPEEIDPSSI--------------SYSEKINEHCSQ 495
           +  + MV +   +    V     +     D S +              +++  I+  C  
Sbjct: 383 RLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQN 442

Query: 496 GRYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           G    A Q+FE+  +     +  TY +L+NG 
Sbjct: 443 GLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 32/201 (15%)

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           ++CNIL+  LC  G L  A +   + +    A D+V++NTL++  C++ RL DA      
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDA-LKAAAAADAVSHNTLVAGYCRDGRLADA------ 143

Query: 421 MEEKKLGPDRYTYAA---IHTALVE----SGRLEEAQKFTSIM-VETGKINHQVV----- 467
             E+ LG  R T AA    +TAL++    SGRL++A +  + M V      +  V     
Sbjct: 144 --ERVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLC 201

Query: 468 ---------QPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKS 518
                    +           P+ ++++ +I   C  G    A+Q+ ++  + G   +  
Sbjct: 202 IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVV 261

Query: 519 TYMNLMNGLIKRRKSISKAVD 539
            Y  L+NG    +  + +A+D
Sbjct: 262 IYSTLINGF-SEQGHVDQALD 281


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 237/511 (46%), Gaps = 42/511 (8%)

Query: 6   CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
           C PD    N ++  L ++G+     D    ++  G      TY+ L  GYC++G L EA 
Sbjct: 84  CPPDVALANRLVRDLCRRGR---PADAARVVEACGSAATAVTYSALADGYCRVGRLDEAR 140

Query: 66  RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
           RVVD M     LP  + YN L++  C  G + +A  L   M      PDVVTYN L+   
Sbjct: 141 RVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAA 197

Query: 126 FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDC 185
            +     +A +LID +   G  P  VT+N+++   C+EG +D A +++ ++   G +P+ 
Sbjct: 198 CKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNT 257

Query: 186 VTYNTL-----------------------------------IDANCKAGNMEEAFRMMDV 210
           V YNT+                                   I + C+ G  + A R+++ 
Sbjct: 258 VNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEK 317

Query: 211 MGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEK 270
           M +     N +T N ++  LC +  +D A  LL++    G   +  +Y  L+ G    E+
Sbjct: 318 MSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAER 377

Query: 271 ANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNT 330
              A  L  +M +   +P   T+N +I  L Q G T QA+++  ++ + G  P+  T+++
Sbjct: 378 WEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSS 437

Query: 331 IIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKG 390
           +I G    G++E++L+  N+M  K F P+I   ++L   L  E  L +A++        G
Sbjct: 438 VIEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTG 496

Query: 391 KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQ 450
            +  +V YNT++  LC+  + + A  +LS M      PD  TY+ +   L   G ++EA+
Sbjct: 497 ISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEAR 556

Query: 451 KFTSIMVETGKINHQVVQPNTSKTPEEIDPS 481
           +  S +     I   +++ + S   + I  S
Sbjct: 557 ELLSTLSSRDVIVDNLIKNDASLLDQSIHTS 587



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 226/426 (53%), Gaps = 1/426 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ++G   LP    YN ++ AL  +G++ +   LL +M  +G  P+  TYNIL+   CK   
Sbjct: 143 VDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRG 202

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++AM ++DLM      P   TYN++++G C  G ++ A  L   + S    P+ V YNT
Sbjct: 203 YRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNT 262

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           ++     +GR  +  +LI E+      P+  T +++I   C+EG   +A +++  M ++ 
Sbjct: 263 VLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD 322

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + + VTYN ++   C+ G+++ A  ++  M   G K N  T N ++  LC  ++ ++A 
Sbjct: 323 CTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAE 382

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+   S+     D +++ T+I    +     +A++++ +M E+   P++ TY+++I GL
Sbjct: 383 DLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGL 442

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
           +++GK EQ++++LNE+   G  P E  ++ +      E ++ +A+Q  +K+ +    P  
Sbjct: 443 AKTGKMEQSLELLNEMGSKGFNP-EINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQA 501

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N +L GLCR G  ++A+    + +  G   D  TY+ LI  L  E  +++A  LLS 
Sbjct: 502 VLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLST 561

Query: 421 MEEKKL 426
           +  + +
Sbjct: 562 LSSRDV 567



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 246/511 (48%), Gaps = 27/511 (5%)

Query: 17  LDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKS 76
           L +L  +G+L+     L  ++     P+    N LV   C+ G   +A RVV+      S
Sbjct: 63  LSSLVHRGELDAA---LRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEAC---GS 116

Query: 77  LPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFK 136
                TY+ L +G+C  G L+EA   R+ ++ + +LP    YN L++     G+  +A  
Sbjct: 117 AATAVTYSALADGYCRVGRLDEA---RRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALV 173

Query: 137 LIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANC 196
           L+D +   G  P+ VT+NI+++  CK     +A +++  M   G +P  VTYN ++D  C
Sbjct: 174 LLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMC 233

Query: 197 KAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEV 256
           + G+++ A  +++ +   G   NT+  NT+L  L    + ++   L+           E 
Sbjct: 234 REGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEA 293

Query: 257 SYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNEL 316
           +   +I+   ++    RA++L ++M +     +  TYNA++ GL + G  + A+ +L+ +
Sbjct: 294 TLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNM 353

Query: 317 LQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGIL 376
              G  P+  T+N ++ G C+  + E A     KM +    PDI+T N ++  LC++G+ 
Sbjct: 354 QTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLT 413

Query: 377 EKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAI 436
            +A++ F+    KG   +SVTY+++I  L K  ++E +  LL+EM  K   P+   Y  +
Sbjct: 414 MQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLL 472

Query: 437 HTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQG 496
              L E  +L EA +    + +TG                 I P ++ Y+  +   C  G
Sbjct: 473 AECLNEEDKLVEAIQMVHKLQDTG-----------------ISPQAVLYNTILLGLCRNG 515

Query: 497 RYKDALQIFEETRQKGIAINKSTYMNLMNGL 527
           +   A+ I       G   ++STY  L+ GL
Sbjct: 516 KTDQAIDILSNMVSDGCMPDESTYSILIQGL 546



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 190/385 (49%), Gaps = 23/385 (5%)

Query: 148 PNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRM 207
           P+    N +++  C+ G+   A ++V   E  G +   VTY+ L D  C+ G ++EA R+
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVV---EACGSAATAVTYSALADGYCRVGRLDEARRV 142

Query: 208 MDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR 267
           +D M    +  +    N ++H LC   ++ +A +LL++   RG   D V+Y  L+    +
Sbjct: 143 VDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK 199

Query: 268 DEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETT 327
                +A++L D M+     P+  TYN ++ G+ + G  + A ++LN L   G  P+   
Sbjct: 200 GRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVN 259

Query: 328 FNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWI 387
           +NT++ G  + G+ E   +   +M  ++  P   T ++++S LC+EG+ ++A++      
Sbjct: 260 YNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMS 319

Query: 388 LKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLE 447
                 + VTYN ++S LC++  ++ A  LLS M+     P+ +TY  +   L  + R E
Sbjct: 320 KHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWE 379

Query: 448 EAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEE 507
           +A+   + M +T  +                 P  ++++  I   C +G    A+++F++
Sbjct: 380 DAEDLMAKMSQTDCL-----------------PDILTFNTIIGFLCQKGLTMQAVEVFKQ 422

Query: 508 TRQKGIAINKSTYMNLMNGLIKRRK 532
             +KG   N  TY +++ GL K  K
Sbjct: 423 MPEKGCCPNSVTYSSVIEGLAKTGK 447



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 34/258 (13%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M    C  + VTYN ++  L ++G ++    LLS+M+  G  PN  TYNILV G C    
Sbjct: 318 MSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAER 377

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            ++A  ++  M+Q   LPD+ T+N +I   C  G+  +A  + K+M      P+ VTY++
Sbjct: 378 WEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSS 437

Query: 121 LINRFFESGRS----------------------------------MEAFKLIDELDEHGI 146
           +I    ++G+                                   +EA +++ +L + GI
Sbjct: 438 VIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGI 497

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
            P AV +N ++   C+ GK D+A  I+ NM  +G  PD  TY+ LI      G M+EA  
Sbjct: 498 SPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARE 557

Query: 207 MMDVMGRKGLKMNTITLN 224
           ++  +  + + ++ +  N
Sbjct: 558 LLSTLSSRDVIVDNLIKN 575


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 253/560 (45%), Gaps = 60/560 (10%)

Query: 8    PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
            P + TYNT+L  L ++GK+ EV  LL +M      PN  TYN ++   CK G +  A+ +
Sbjct: 564  PTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGM 623

Query: 68   VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            +  MT    +PD+ +YN  ++G      L EAFR+  +M+ + L PD  T  T++  F +
Sbjct: 624  LYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVK 682

Query: 128  SGRSMEAFKLIDELDEHGIKPNAVT-----HNIM-------------------------- 156
            +G   EA   +  L E+ ++P +       H++M                          
Sbjct: 683  NGLMNEA---LHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILL 739

Query: 157  --------IKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMM 208
                    I+  CK  K  +A ++V+  E  G S    +YN LI        ++ A  + 
Sbjct: 740  DDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLF 799

Query: 209  DVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRD 268
              M R G   +  T N IL  +    ++++   +      +GY    V+Y T+I+G  + 
Sbjct: 800  SEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKS 859

Query: 269  EKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
            +    A+ L+ ++      P+  TY  ++ GL + GK E A D+ +E+L  G  P+   +
Sbjct: 860  KMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIY 919

Query: 329  NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWIL 388
            N +++G+   G  EK  +    MV++   PDI +  +L+  LC  G L  +L +FR    
Sbjct: 920  NILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTE 979

Query: 389  KGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEE 448
             G   D +TYN LI  L +  RLE+A  L ++ME+  + P+ YTY ++   L + G+  E
Sbjct: 980  LGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAE 1039

Query: 449  AQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEET 508
            A K    +++ G                   P+  +Y+  I  +   G   +A   + + 
Sbjct: 1040 AGKMYEELLKNG-----------------WKPNVFTYNALIGGYSVSGSTDNAFASYGQM 1082

Query: 509  RQKGIAINKSTYMNLMNGLI 528
               G   N STYM L N L+
Sbjct: 1083 IVGGCPPNSSTYMQLPNQLL 1102



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 252/521 (48%), Gaps = 18/521 (3%)

Query: 12  TYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLM 71
           T+ TI  +L  +G L      L  MK+ G+V N  TYN L+    K G+ +EAM V  +M
Sbjct: 149 TFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVM 208

Query: 72  TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRS 131
             +  +P V TY++L+  +     +E    L +EME   + P+V +Y   I    ++GR 
Sbjct: 209 ATDGIVPSVRTYSVLMLAFGKRD-VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRF 267

Query: 132 MEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTL 191
            EA+K++ ++++ G KP+ VT+ ++I+  C  G++  A  +   M+ +   PD VTY TL
Sbjct: 268 EEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITL 327

Query: 192 IDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGY 251
           +D     G+      + + M   G   N +    ++  LC   ++DEA  + +   ++G 
Sbjct: 328 LDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGI 387

Query: 252 YLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAID 311
              + SY +LI+G+ + ++ N AL+L++ M      P+ +TY   I    +SG++ +AI 
Sbjct: 388 EPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIK 447

Query: 312 MLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLC 371
               +   G++PD    N +++     G++  A +  +++      PD +T  +++    
Sbjct: 448 RYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCS 507

Query: 372 REGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRY 431
           +    ++A+K F   I      D +  N+LI +L K  R  +A+ +  E++E  L P   
Sbjct: 508 KASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDC 567

Query: 432 TYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINE 491
           TY  +   L   G+++E             + H + + N++  P    P+ I+Y+  ++ 
Sbjct: 568 TYNTLLAGLGREGKVKE-------------VMHLLEEMNSNSYP----PNLITYNTVLDC 610

Query: 492 HCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
            C  G    AL +      KG   + S+Y   ++GL+K  +
Sbjct: 611 LCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDR 651



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 228/469 (48%), Gaps = 8/469 (1%)

Query: 5    GCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEA 64
            GC+PD  +YNT L  L K+ +L E   +   MKK  L P+ TT   ++  + K G + EA
Sbjct: 631  GCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEA 689

Query: 65   MRVV-DLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            +  + + + Q  S  D  +++ L+ G      +E++    + +   ++L D    + LI 
Sbjct: 690  LHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIR 749

Query: 124  RFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSP 183
               +S +++EA +L+ + +  G+     ++N +I     E  ID A  +   M+  G  P
Sbjct: 750  HLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDP 809

Query: 184  DCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLL 243
            D  TYN ++DA  K+  +E+  ++   M  KG +   +T NTI+  L   K L EA  L 
Sbjct: 810  DEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLY 869

Query: 244  NSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQS 303
                  G+     +YG L+ G  +D K   A  L+DEM +    P+   YN ++ G   +
Sbjct: 870  YKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLA 929

Query: 304  GKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTC 363
            G TE+  ++   ++  G+ PD  ++  +I   C+ G++  +L +  ++ E   +PD++T 
Sbjct: 930  GNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITY 989

Query: 364  NILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEE 423
            N+L+ GL R G LE+A+  F      G A +  TYN+LI  L KE +  +A  +  E+ +
Sbjct: 990  NLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLK 1049

Query: 424  KKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTS 472
                P+ +TY A+      SG  + A      M+  G        PN+S
Sbjct: 1050 NGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG------CPPNSS 1092



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 251/529 (47%), Gaps = 19/529 (3%)

Query: 6    CLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAM 65
            C+PD +  N+++D L+K G+ NE   +  ++K+  L P   TYN L++G  + G +KE M
Sbjct: 527  CVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVM 586

Query: 66   RVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRF 125
             +++ M  N   P++ TYN +++  C  G +  A  +   M     +PD+ +YNT ++  
Sbjct: 587  HLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGL 646

Query: 126  FESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRN-MEENGFSPD 184
             +  R  EAF++  ++ +  + P+  T   ++  + K G +++A   ++  + + G   D
Sbjct: 647  VKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKAD 705

Query: 185  CVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLN 244
              ++++L++   K   ME++    + +    + ++   L+ ++  LC  KK  EA+ L+ 
Sbjct: 706  RSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVK 765

Query: 245  SASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSG 304
                 G  L   SY  LI G   +   + A  L+ EMK     P  FTYN ++  + +S 
Sbjct: 766  KFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSM 825

Query: 305  KTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCN 364
            + E  + +  E+   G      T+NTII G      + +A+  + K++ + F P   T  
Sbjct: 826  RIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYG 885

Query: 365  ILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEK 424
             LL GL ++G +E A   F   +  G   +   YN L++        E    L   M ++
Sbjct: 886  PLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQ 945

Query: 425  KLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSIS 484
             + PD  +Y  +  AL  +GRL ++  +   + E G                 ++P  I+
Sbjct: 946  GINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELG-----------------LEPDLIT 988

Query: 485  YSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKS 533
            Y+  I+     GR ++A+ +F +  + GIA N  TY +L+  L K  K+
Sbjct: 989  YNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKA 1037



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 225/449 (50%), Gaps = 1/449 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G  P+  +Y   +  L + G+  E   +L  M+ +G  P+  T  +L+   C  G 
Sbjct: 242 MEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGR 301

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           + +A  V   M  +   PD  TY  L++   + G       +   M++     +VV Y  
Sbjct: 302 VSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTA 361

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++   + GR  EA  + D++ + GI+P   ++N +I  + K  +++ A ++  +M  +G
Sbjct: 362 VVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHG 421

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            +P+  TY   I+   K+G   +A +  ++M  KG+  + +  N +L++L    +L  A 
Sbjct: 422 PTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAK 481

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            + +     G   D ++Y  +I    +   A+ A+K++ EM E + +P     N++I  L
Sbjct: 482 RVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTL 541

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            ++G+  +A  + +EL +  + P + T+NT++ G   EG+V++ +    +M   S+ P++
Sbjct: 542 YKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNL 601

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           +T N +L  LC+ G +  AL    +  +KG   D  +YNT +  L KE RL +AF +  +
Sbjct: 602 ITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQ 661

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEA 449
           M +K L PD  T   I  + V++G + EA
Sbjct: 662 M-KKVLAPDYTTLCTILPSFVKNGLMNEA 689



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 117/221 (52%), Gaps = 2/221 (0%)

Query: 2    EGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWL 61
            EGF   P   TY  +LD L K GK+ +  DL  +M   G  PNR  YNIL++GY   G  
Sbjct: 875  EGFS--PTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNT 932

Query: 62   KEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTL 121
            ++   +   M      PD+ +Y +LI   C AG L ++    +++  L L PD++TYN L
Sbjct: 933  EKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLL 992

Query: 122  INRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGF 181
            I+    SGR  EA  L +++++ GI PN  T+N +I +  KEGK  +A K+   + +NG+
Sbjct: 993  IHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGW 1052

Query: 182  SPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTIT 222
             P+  TYN LI     +G+ + AF     M   G   N+ T
Sbjct: 1053 KPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSST 1093



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 145/294 (49%), Gaps = 2/294 (0%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M+  GC PD  TYN ILDA+ K  ++ ++  +  +M  +G      TYN ++SG  K   
Sbjct: 802  MKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKM 861

Query: 61   LKEAMRV-VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYN 119
            L EAM +   LM++  S P   TY  L++G    G +E+A  L  EM      P+   YN
Sbjct: 862  LYEAMDLYYKLMSEGFS-PTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYN 920

Query: 120  TLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEEN 179
             L+N +  +G + +  +L   + + GI P+  ++ ++I   C  G+++ +    R + E 
Sbjct: 921  ILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTEL 980

Query: 180  GFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEA 239
            G  PD +TYN LI    ++G +EEA  + + M + G+  N  T N+++  L  E K  EA
Sbjct: 981  GLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEA 1040

Query: 240  YMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTY 293
              +     K G+  +  +Y  LI GY      + A   + +M      P++ TY
Sbjct: 1041 GKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 101/191 (52%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            M  +GC P+   YN +L+     G   +V +L  +M  QG+ P+  +Y +L+   C  G 
Sbjct: 907  MLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGR 966

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            L +++     +T+    PD+ TYN+LI+G   +G LEEA  L  +ME   + P++ TYN+
Sbjct: 967  LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNS 1026

Query: 121  LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
            LI    + G++ EA K+ +EL ++G KPN  T+N +I  Y   G  D A      M   G
Sbjct: 1027 LILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG 1086

Query: 181  FSPDCVTYNTL 191
              P+  TY  L
Sbjct: 1087 CPPNSSTYMQL 1097



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 146/346 (42%), Gaps = 25/346 (7%)

Query: 191 LIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRG 250
           L+ A+ +  +M + F   D+M R+ +K N  T  TI  +L  E  L  A + L    + G
Sbjct: 121 LMRAHGRVRDMAQVF---DLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAG 177

Query: 251 YYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAI 310
             L+  +Y  LI    +      A++++  M    I+PS  TY+ ++    +    E  +
Sbjct: 178 IVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVV 236

Query: 311 DMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGL 370
            +L E+   G+ P+  ++   I      G+ E+A +   KM ++  KPD+VT  +L+  L
Sbjct: 237 WLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQIL 296

Query: 371 CREGILEKALKFFRSWILKG--KAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           C  G +  A   F  W +K   +  D VTY TL+              + + M+      
Sbjct: 297 CDAGRVSDAKDVF--WKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYND 354

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEK 488
           +   Y A+  AL + GR++EA      M + G                 I+P   SY+  
Sbjct: 355 NVVAYTAVVDALCQVGRVDEASDVFDQMKQKG-----------------IEPQQYSYNSL 397

Query: 489 INEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSI 534
           I+      R   AL++F      G   N  TY+  +N   K  +S+
Sbjct: 398 ISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESL 443



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 65/123 (52%)

Query: 4    FGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKE 63
             G  PD +TYN ++  L + G+L E   L +DM+K G+ PN  TYN L+    K G   E
Sbjct: 980  LGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAE 1039

Query: 64   AMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLIN 123
            A ++ + + +N   P+V+TYN LI G+  +G  + AF    +M      P+  TY  L N
Sbjct: 1040 AGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPN 1099

Query: 124  RFF 126
            +  
Sbjct: 1100 QLL 1102



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 40/88 (45%)

Query: 1    MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
            ME  G  P+  TYN+++  L K+GK  E   +  ++ K G  PN  TYN L+ GY   G 
Sbjct: 1012 MEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGS 1071

Query: 61   LKEAMRVVDLMTQNKSLPDVWTYNMLIN 88
               A      M      P+  TY  L N
Sbjct: 1072 TDNAFASYGQMIVGGCPPNSSTYMQLPN 1099


>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
 gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
          Length = 829

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 36/496 (7%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M  +G +PD  T++T++  L K G + E  DL   + K+G+     TYN L++GY  LG 
Sbjct: 298 MLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGL 357

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            KE  +++ +M      PD+ TY +LI G C +G +EE  ++RK++    L  ++VTY+ 
Sbjct: 358 TKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSV 417

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNM---- 176
           L+N  F+ G   E   L+ E+   G+  + + ++I+I  YCK G+I+KA ++   M    
Sbjct: 418 LLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQ 477

Query: 177 -----EENGFS---------------------------PDCVTYNTLIDANCKAGNMEEA 204
                  N FS                            D V YN +ID   K G++  A
Sbjct: 478 RVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 537

Query: 205 FRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITG 264
            R+ D +   G+    +T N++L+  C    L  A     +    G     V+Y TL+  
Sbjct: 538 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 597

Query: 265 YFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPD 324
                + N  L L+DEM  ++I  +  TY+ ++ GL +  + ++AI++L ++   G+  D
Sbjct: 598 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 657

Query: 325 ETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFR 384
             T+NT+I GFC    V+ A   H+ M+ +   P  VT N+L++ LC +G + +A     
Sbjct: 658 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLE 717

Query: 385 SWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESG 444
           S    G  +    Y TLI + C +    +A  L+ ++ +         ++A    L +  
Sbjct: 718 SLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 777

Query: 445 RLEEAQKFTSIMVETG 460
             +EA  F  IM+  G
Sbjct: 778 FAKEAFMFVPIMLSVG 793



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 257/526 (48%), Gaps = 20/526 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P  +T+N ++ AL   G +   +  L  M K GLVP+R T++ L+ G CK+G ++EA+ +
Sbjct: 270 PLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDL 329

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
            + +T+     ++ TYN LING+   G+ +E  ++ + M    + PD+VTY  LI    E
Sbjct: 330 FERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCE 389

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           SG   E  K+  ++ + G++ N VT+++++    K+G   +   ++  +   G   D + 
Sbjct: 390 SGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIA 449

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLN--TILHTLCCEKKLDEAYMLLNS 245
           Y+ LI   CK G +E+A ++ + M      M T +LN  +IL  LC +  L EA   L +
Sbjct: 450 YSILIHGYCKLGEIEKALQVCNAMCSSQRVMPT-SLNHFSILLGLCKKGLLVEARWYLEN 508

Query: 246 ASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGK 305
            +++    D V Y  +I GY +      A++L+D++    + P+  T N++++G  + G 
Sbjct: 509 VARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGD 568

Query: 306 TEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNI 365
            + A      +  SG++P   T+ T++      G+V   L   ++MV K  K + VT ++
Sbjct: 569 LQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSV 628

Query: 366 LLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
           ++ GLC++   ++A+   +    KG   D +TYNTLI   C+   ++ AF +   M  + 
Sbjct: 629 IVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRG 688

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISY 485
           L P   TY  +   L   G++ +A+     + E G                 I     +Y
Sbjct: 689 LVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG-----------------IKLRKFAY 731

Query: 486 SEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRR 531
           +  I   C++G   +A+ +  +    G   +   +   +N L KR+
Sbjct: 732 TTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 777



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 264/537 (49%), Gaps = 27/537 (5%)

Query: 12  TYNTILDALFKKGKLNEVR-DLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVV-D 69
           TY+++L  L    ++ +V  +L  +M+  G+ P+  +++I+++G CK   + EA+  + +
Sbjct: 206 TYDSLLHGL----RMTDVALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQE 261

Query: 70  LMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESG 129
              + K  P   T+N+L++  CN G ++ A      M    L+PD  T++TLI+   + G
Sbjct: 262 ARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVG 321

Query: 130 RSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYN 189
              EA  L + + + G++   VT+N +I  Y   G   +  KI++ M   G  PD VTY 
Sbjct: 322 SMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYT 381

Query: 190 TLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKR 249
            LI  +C++G++EE  ++   +  +GL++N +T + +L+ L  +    E   LL      
Sbjct: 382 ILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNI 441

Query: 250 GYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQ-IMPSTFTYNAMIWGLSQSGKTEQ 308
           G  +D ++Y  LI GY +  +  +AL++ + M   Q +MP++  + +++ GL + G   +
Sbjct: 442 GLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVE 501

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A   L  + +     D   +N +I G+   G +  A++ ++++      P IVTCN LL 
Sbjct: 502 ARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLY 561

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGP 428
           G C+ G L+ A  +FR+  L G    +VTY TL+ +L +   +     L  EM  K++  
Sbjct: 562 GYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKA 621

Query: 429 DRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNT-------SKTPE----- 476
           +  TY+ I   L +  R +EA      M   G IN   +  NT       S+  +     
Sbjct: 622 NAVTYSVIVKGLCKQLRFDEAINVLKDMDSKG-INADPITYNTLIQGFCESENVQMAFHI 680

Query: 477 -------EIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
                   + P+ ++Y+  IN  C +G+   A  + E  R+ GI + K  Y  L+  
Sbjct: 681 HDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKA 737



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 209/403 (51%), Gaps = 3/403 (0%)

Query: 11  VTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDL 70
           VTY+ +L+ALFKKG   E+ +LL ++   GL  +   Y+IL+ GYCKLG +++A++V + 
Sbjct: 413 VTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNA 472

Query: 71  M-TQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLP-DVVTYNTLINRFFES 128
           M +  + +P    +  ++ G C  G+L EA R   E  + K  P DVV YN +I+ + + 
Sbjct: 473 MCSSQRVMPTSLNHFSILLGLCKKGLLVEA-RWYLENVARKYQPTDVVFYNVVIDGYAKL 531

Query: 129 GRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTY 188
           G  + A +L D++   G+ P  VT N ++  YCK G +  A    R ++ +G  P  VTY
Sbjct: 532 GDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTY 591

Query: 189 NTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASK 248
            TL+DA  +AG +     + D M  K +K N +T + I+  LC + + DEA  +L     
Sbjct: 592 TTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDS 651

Query: 249 RGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQ 308
           +G   D ++Y TLI G+   E    A  + D M  R ++P+  TYN +I  L   GK  Q
Sbjct: 652 KGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQ 711

Query: 309 AIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLS 368
           A  +L  L ++G+   +  + T+I   C++G    A+    K+++  F+  I   +  ++
Sbjct: 712 AEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAIN 771

Query: 369 GLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRL 411
            LC+    ++A  F    +  G   D+  Y  L  +L K   L
Sbjct: 772 RLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQKNSEL 814



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 172/322 (53%)

Query: 7   LPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMR 66
           +P ++ + +IL  L KKG L E R  L ++ ++    +   YN+++ GY KLG +  A+R
Sbjct: 480 MPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVR 539

Query: 67  VVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFF 126
           + D +T     P + T N L+ G+C  G L+ A    + ++   LLP  VTY TL++   
Sbjct: 540 LYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALS 599

Query: 127 ESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCV 186
           E+G       L DE+    IK NAVT+++++K  CK+ + D+A  ++++M+  G + D +
Sbjct: 600 EAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPI 659

Query: 187 TYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSA 246
           TYNTLI   C++ N++ AF + D+M  +GL    +T N +++ LC + K+ +A +LL S 
Sbjct: 660 TYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESL 719

Query: 247 SKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKT 306
            + G  L + +Y TLI           A+ L  ++ +     S   ++A I  L +    
Sbjct: 720 RENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFA 779

Query: 307 EQAIDMLNELLQSGMIPDETTF 328
           ++A   +  +L  G+ PD   +
Sbjct: 780 KEAFMFVPIMLSVGIYPDTQIY 801


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 219/439 (49%), Gaps = 1/439 (0%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M G G +P + T+N +L  L K     +   + ++ K   +  +  ++ I++ G C++G+
Sbjct: 108 MIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGY 166

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           L +   V+  M +    P+V  Y  LI+G C  G +E   +L  +M  L ++ +  TY  
Sbjct: 167 LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 226

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LIN FF+ G   +  +L +++   GI PN  T+N MI   C +GK++ A ++   M E G
Sbjct: 227 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 286

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
            + + VTYNTLI   C+   + EA R+M  M R GL  N I+ NT++   C    LD+A 
Sbjct: 287 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 346

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L N     G      +Y  LI G+   + +     +  EM+ R + PS  TY  ++  L
Sbjct: 347 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 406

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +S   E+A  + + + ++G++ D   +  +IHG C  G +++A +    + E   KP+ 
Sbjct: 407 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 466

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
           V  N ++ G C+EG   +AL+  +     G   +  +YN+ I  LCK+ +  +A  LL +
Sbjct: 467 VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKD 526

Query: 421 MEEKKLGPDRYTYAAIHTA 439
           M E  L P    +  I  A
Sbjct: 527 MIELGLKPSISIWNMISKA 545



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 214/427 (50%), Gaps = 1/427 (0%)

Query: 34  SDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNA 93
           + M  +GLVP   T+N L+    K  + ++A RV +    N  L DV+++ ++I G C  
Sbjct: 106 NQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKL-DVYSFGIMIKGCCEV 164

Query: 94  GMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTH 153
           G L++ F +  +ME + L P+VV Y TLI+   ++G      +L  ++ E  +  N  T+
Sbjct: 165 GYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTY 224

Query: 154 NIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGR 213
            ++I  + K G      ++   M+  G  P+  TYN++I   C  G +  AF + D M  
Sbjct: 225 TVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE 284

Query: 214 KGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANR 273
           +G+  N +T NT++  LC E+++ EA  L+    + G   + +SY TLI GY      ++
Sbjct: 285 RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDK 344

Query: 274 ALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIH 333
           A  L+++MK     PS  TYN +I G S++  +    DM+ E+   G+ P + T+  ++ 
Sbjct: 345 ASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMD 404

Query: 334 GFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAV 393
                  +EKA Q ++ M +     DI    +L+ GLC  G +++A K F+S        
Sbjct: 405 ALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKP 464

Query: 394 DSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFT 453
           + V YNT+I   CKE     A  LL EM E  + P+  +Y +    L +  +  EA+   
Sbjct: 465 NDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLL 524

Query: 454 SIMVETG 460
             M+E G
Sbjct: 525 KDMIELG 531



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 212/458 (46%), Gaps = 19/458 (4%)

Query: 76  SLP-DVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEA 134
           S P  V  +  +IN    + + E+A     +M    L+P   T+N L+    +S    +A
Sbjct: 77  SFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKA 136

Query: 135 FKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDA 194
           +++ +E  +  +K +  +  IMIK  C+ G +DK  +++  MEE G SP+ V Y TLID 
Sbjct: 137 WRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 195

Query: 195 NCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLD 254
            CK G++E   ++   MG   +  N  T   +++         +   L       G   +
Sbjct: 196 CCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPN 255

Query: 255 EVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLN 314
             +Y ++I     D K N A +L+DEM+ER +  +  TYN +I GL Q  +  +A  ++ 
Sbjct: 256 VYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMC 315

Query: 315 ELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREG 374
            + + G+ P+  ++NT+I G+CS G ++KA    N+M      P + T NIL++G     
Sbjct: 316 RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 375

Query: 375 ILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYA 434
                    R    +G +   VTY  L+ +L +   +E AF + S ME+  L  D Y Y 
Sbjct: 376 NSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYG 435

Query: 435 AIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCS 494
            +   L   G ++EA K    + E                   + P+ + Y+  I  +C 
Sbjct: 436 VLIHGLCVVGDMKEASKLFKSLDEM-----------------HLKPNDVIYNTMIYGYCK 478

Query: 495 QGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRK 532
           +G    AL++ +E  + G+  N ++Y + +  L K  K
Sbjct: 479 EGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEK 516



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 163/359 (45%), Gaps = 19/359 (5%)

Query: 179 NGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDE 238
           + F    + +  +I+A+ ++   E+A    + M  +GL   + T N +L  L      ++
Sbjct: 76  DSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 135

Query: 239 AYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIW 298
           A+ + N  +K    LD  S+G +I G       ++  ++  +M+E  + P+   Y  +I 
Sbjct: 136 AWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 194

Query: 299 GLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKP 358
           G  ++G  E+   +  ++ +  ++ ++ T+  +I+GF   G  +  ++ + KM      P
Sbjct: 195 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVP 254

Query: 359 DIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLL 418
           ++ T N ++   C +G L  A + F     +G A + VTYNTLI  LC+ERR+ +A  L+
Sbjct: 255 NVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLM 314

Query: 419 SEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEI 478
             M+   L P+  +Y  +       G L++A    + M  +G+                 
Sbjct: 315 CRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ----------------- 357

Query: 479 DPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKRRKSISKA 537
            PS  +Y+  I              +  E   +G++ +K TY  LM+ L+ R  +I KA
Sbjct: 358 SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV-RSDNIEKA 415



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 60/128 (46%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G + D   Y  ++  L   G + E   L   + +  L PN   YN ++ GYCK G 
Sbjct: 422 MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGS 481

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
              A+R++  M +N  +P+V +YN  I   C      EA  L K+M  L L P +  +N 
Sbjct: 482 SYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNM 541

Query: 121 LINRFFES 128
           +    F++
Sbjct: 542 ISKARFDN 549


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 251/530 (47%), Gaps = 17/530 (3%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           M   G  P +  Y  ++ A      + E    +  MK++G+  +  TY+ILVSG+ K G 
Sbjct: 337 MRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGN 396

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
            + A        +  S  +   Y  +I  +C    +++A  L +EME   +   +  Y+T
Sbjct: 397 AESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHT 456

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           +++ +   G   +   + +   E G+ P+ +T+  +I  Y K GK+ KA ++ + ME  G
Sbjct: 457 MMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAG 516

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              +  TY+ LI+   K  +   AF + + + + G+K + +  N I+   C   K+D A 
Sbjct: 517 IKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAV 576

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
             +    K+ +     ++  +I G+ R  +  +AL ++D M+    +P+  TYNA+I GL
Sbjct: 577 CTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGL 636

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
            +  K E+A  +L+E+  +G+ P+E T+ TI+HG+ S G   KA  +  K+ ++  + D+
Sbjct: 637 VEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDV 696

Query: 361 VTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSE 420
            T   LL   C+ G ++ AL   +    +    ++  YN LI    +   + +A  L+ +
Sbjct: 697 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQ 756

Query: 421 MEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDP 480
           M+ + + PD +TY +   A  ++G ++ A K    M   G      V+PN          
Sbjct: 757 MKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVG------VKPNVK-------- 802

Query: 481 SSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNGLIKR 530
              +Y+  IN        + AL  FEE +  G+  +++ Y  LM  L+ R
Sbjct: 803 ---TYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSR 849



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 230/519 (44%), Gaps = 17/519 (3%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGWLKEAMRV 67
           P    Y  +++   ++G ++  R+    M+ +G+ P+   Y  L+  Y     ++EA+  
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368

Query: 68  VDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE 127
           V  M +      + TY++L++G+   G  E A    +E +      + + Y  +I  + +
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
                +A  L+ E++E GI      ++ M+  Y   G  DK   +    +E G +P  +T
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT 488

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           Y  LI+   K G + +A  +   M   G+K N  T + +++     K    A+ +     
Sbjct: 489 YGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 548

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
           K G   D V Y  +IT +    K +RA+    EM++++  P+T T+  +I G ++ G+ +
Sbjct: 549 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 608

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
           +A+D+ + +  SG IP   T+N +I G   + ++EKA Q  ++M      P+  T   ++
Sbjct: 609 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 668

Query: 368 SGLCREGILEKALKFFRSWILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLG 427
            G    G   KA  +F     +G  +D  TY  L+ + CK  R++ A  +  EM  + + 
Sbjct: 669 HGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 728

Query: 428 PDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSE 487
            + + Y  +       G + EA      M   G      VQP+             +Y+ 
Sbjct: 729 RNTFIYNILIDGWARRGDIWEAADLMQQMKREG------VQPDIH-----------TYTS 771

Query: 488 KINEHCSQGRYKDALQIFEETRQKGIAINKSTYMNLMNG 526
            IN     G  + A +  EE +  G+  N  TY  L+NG
Sbjct: 772 FINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLING 810



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 153/341 (44%)

Query: 1   MEGFGCLPDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLGW 60
           ME  G   +  TY+ +++   K         +  D+ K G+ P+   YN +++ +C +G 
Sbjct: 512 MEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGK 571

Query: 61  LKEAMRVVDLMTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNT 120
           +  A+  V  M + +  P   T+  +I+G+   G +++A  +   M     +P V TYN 
Sbjct: 572 MDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNA 631

Query: 121 LINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENG 180
           LI    E  +  +A +++DE+   G+ PN  T+  ++  Y   G   KA      + + G
Sbjct: 632 LILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEG 691

Query: 181 FSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAY 240
              D  TY  L+ A CK+G M+ A  +   M  + +  NT   N ++        + EA 
Sbjct: 692 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAA 751

Query: 241 MLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGL 300
            L+    + G   D  +Y + I    +     RA K  +EMK   + P+  TY  +I G 
Sbjct: 752 DLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGW 811

Query: 301 SQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQV 341
           +++   E+A+    E+  SG+ PD   ++ ++    S   V
Sbjct: 812 ARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATV 852



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 167/380 (43%), Gaps = 17/380 (4%)

Query: 147 KPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFR 206
           KP+   + +M+ +Y + G + +A +    M   G  P    Y  LI A     +MEEA  
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALS 367

Query: 207 MMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYF 266
            +  M  +G++M+ +T + ++         + A      A ++   L+ + YG +I  Y 
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYC 427

Query: 267 RDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDET 326
           +    ++A  L  EM+E  I      Y+ M+ G +  G  ++ + +     + G+ P   
Sbjct: 428 QRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVI 487

Query: 327 TFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSW 386
           T+  +I+ +   G+V KAL+   +M     K ++ T ++L++G  +      A   F   
Sbjct: 488 TYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL 547

Query: 387 ILKGKAVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRL 446
           I  G   D V YN +I++ C   +++ A   + EM++++  P   T+  I       G +
Sbjct: 548 IKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEM 607

Query: 447 EEAQKFTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFE 506
           ++A     +M  +G I                 P+  +Y+  I     + + + A QI +
Sbjct: 608 KKALDVFDMMRMSGCI-----------------PTVHTYNALILGLVEKRKMEKAEQILD 650

Query: 507 ETRQKGIAINKSTYMNLMNG 526
           E    G++ N+ TY  +M+G
Sbjct: 651 EMTLAGVSPNEHTYTTIMHG 670



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 17/247 (6%)

Query: 283 ERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVE 342
           ER   PS   Y  M+   ++ G   +A +   ++   G+ P    +  +IH +     +E
Sbjct: 304 ERIKKPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDME 363

Query: 343 KALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNTLI 402
           +AL    KM E+  +  +VT +IL+SG  + G  E A  +F+    K  +++++ Y  +I
Sbjct: 364 EALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNII 423

Query: 403 SSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVETGKI 462
            + C+   ++ A  L+ EMEE+ +      Y  +       G  ++         E G  
Sbjct: 424 YAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECG-- 481

Query: 463 NHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIAINKSTYMN 522
                          ++PS I+Y   IN +   G+   AL++ +E    GI  N  TY  
Sbjct: 482 ---------------LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSM 526

Query: 523 LMNGLIK 529
           L+NG +K
Sbjct: 527 LINGFLK 533


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 194/392 (49%), Gaps = 56/392 (14%)

Query: 8   PDNVTYNTILDALFKKGKLNEVRDLLSDMKKQGLVPNRTTYNILVSGYCKLG-------- 59
           P+  T+N +++AL K GK+N+ RD++ DMK  G  PN  +YN L+ GYCKLG        
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 60  --------------------------W----LKEAMRVVDLMTQNKSLPDVWTYNMLING 89
                                     W    L  +M+V   M      P+V +YN LING
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340

Query: 90  WCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPN 149
            CN G + EA  +R +M S  + P+++TYN LIN F ++    EA  +   +   G  P 
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400

Query: 150 AVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMD 209
              +N++I  YCK GKID    +   ME  G  PD  TYN LI   C+ GN+E A ++ D
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460

Query: 210 VMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDE 269
            +  KGL  + +T + ++   C + +  +A MLL   SK G     ++Y  ++ GY ++ 
Sbjct: 461 QLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519

Query: 270 KANRALKLWDEM-KERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTF 328
               A  +  +M KER++  +  +YN ++ G SQ GK E A  +LNE+L+ G++P+  T+
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579

Query: 329 NTIIHGFCSEGQVEKALQFHNKMVEKSFKPDI 360
             +                  +MV++ F PDI
Sbjct: 580 EIV----------------KEEMVDQGFVPDI 595



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 209/385 (54%), Gaps = 7/385 (1%)

Query: 71  MTQNKSLPDVWTYNMLINGWCNAGMLEEAFRLRKEMESLKLLPDVVTYNTLINRFFE--- 127
           M + K  P+V+T+N++IN  C  G + +A  + ++M+     P+VV+YNTLI+ + +   
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273

Query: 128 SGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCKEGKIDKACKIVRNMEENGFSPDCVT 187
           +G+  +A  ++ E+ E+ + PN  T NI+I  + K+  +  + K+ + M +    P+ ++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333

Query: 188 YNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNTITLNTILHTLCCEKKLDEAYMLLNSAS 247
           YN+LI+  C  G + EA  M D M   G++ N IT N +++  C    L EA  +  S  
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393

Query: 248 KRGYYLDEVSYGTLITGYFRDEKANRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTE 307
            +G       Y  LI  Y +  K +    L +EM+   I+P   TYN +I GL ++G  E
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 308 QAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILL 367
            A  + ++L   G+ PD  TF+ ++ G+C +G+  KA     +M +   KP  +T NI++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512

Query: 368 SGLCREGILEKALKFFRSWILKGKAV--DSVTYNTLISSLCKERRLEDAFGLLSEMEEKK 425
            G C+EG L KA    R+ + K + +  +  +YN L+    ++ +LEDA  LL+EM EK 
Sbjct: 513 KGYCKEGNL-KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571

Query: 426 LGPDRYTYAAIHTALVESGRLEEAQ 450
           L P+R TY  +   +V+ G + + +
Sbjct: 572 LVPNRITYEIVKEEMVDQGFVPDIE 596



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 202/373 (54%), Gaps = 9/373 (2%)

Query: 104 KEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDEHGIKPNAVTHNIMIKWYCK- 162
           KEM   K+ P+V T+N +IN   ++G+  +A  +++++  +G  PN V++N +I  YCK 
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271

Query: 163 --EGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRKGLKMNT 220
              GK+ KA  +++ M EN  SP+  T+N LID   K  N+  + ++   M  + +K N 
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331

Query: 221 ITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKLWDE 280
           I+ N++++ LC   K+ EA  + +     G   + ++Y  LI G+ +++    AL ++  
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391

Query: 281 MKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFCSEGQ 340
           +K +  +P+T  YN +I    + GK +    +  E+ + G++PD  T+N +I G C  G 
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 341 VEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVDSVTYNT 400
           +E A +  +++  K   PD+VT +IL+ G CR+G   KA    +     G     +TYN 
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 401 LISSLCKERRLEDAFGLLSEME-EKKLGPDRYTYAAIHTALVESGRLEEAQKFTSIMVET 459
           ++   CKE  L+ A  + ++ME E++L  +  +Y  +     + G+LE+A    + M+E 
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 460 G----KINHQVVQ 468
           G    +I +++V+
Sbjct: 571 GLVPNRITYEIVK 583



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/438 (22%), Positives = 200/438 (45%), Gaps = 25/438 (5%)

Query: 96  LEEAFRLRKEMESLKLLPDVVTYNTLINRFFESGRSMEAFKLIDELDE-HGIKPNAVTHN 154
           LE  F+L   + + K    + ++   ++ F  +G   +   +   +     +  N++  +
Sbjct: 101 LELTFKLLHSLANAKRYSKIRSF---LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIAD 157

Query: 155 IMIKWYCKEGKIDKACKIVRNMEENGFSPDCVTYNTLIDANCKAGNMEEAFRMMDVMGRK 214
           +++  Y    + +   +  +     G+    ++   L+ A  K     +   +   M R+
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR 217

Query: 215 GLKMNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFR---DEKA 271
            ++ N  T N +++ LC   K+++A  ++      G   + VSY TLI GY +   + K 
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277

Query: 272 NRALKLWDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTI 331
            +A  +  EM E  + P+  T+N +I G  +      ++ +  E+L   + P+  ++N++
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337

Query: 332 IHGFCSEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGK 391
           I+G C+ G++ +A+   +KMV    +P+++T N L++G C+  +L++AL  F S   +G 
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397

Query: 392 AVDSVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQK 451
              +  YN LI + CK  +++D F L  EME + + PD  TY  +   L  +G +E A+K
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457

Query: 452 FTSIMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQK 511
               +   G                   P  +++   +  +C +G  + A  + +E  + 
Sbjct: 458 LFDQLTSKGL------------------PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499

Query: 512 GIAINKSTYMNLMNGLIK 529
           G+     TY  +M G  K
Sbjct: 500 GLKPRHLTYNIVMKGYCK 517



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 131/318 (41%), Gaps = 55/318 (17%)

Query: 218 MNTITLNTILHTLCCEKKLDEAYMLLNSASKRGYYLDEVSYGTLITGYFRDEKANRALKL 277
           +N+I  + ++       + +  +     +   GY L  +S   L+    ++ ++     +
Sbjct: 151 VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYV 210

Query: 278 WDEMKERQIMPSTFTYNAMIWGLSQSGKTEQAIDMLNELLQSGMIPDETTFNTIIHGFC- 336
           + EM  R+I P+ FT+N +I  L ++GK  +A D++ ++   G  P+  ++NT+I G+C 
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270

Query: 337 --SEGQVEKALQFHNKMVEKSFKPDIVTCNILLSGLCREGILEKALKFFRSWILKGKAVD 394
               G++ KA     +MVE    P++ T NIL+ G                W        
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF---------------W-------- 307

Query: 395 SVTYNTLISSLCKERRLEDAFGLLSEMEEKKLGPDRYTYAAIHTALVESGRLEEAQKFTS 454
                       K+  L  +  +  EM ++ + P+  +Y ++   L   G++ EA     
Sbjct: 308 ------------KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRD 355

Query: 455 IMVETGKINHQVVQPNTSKTPEEIDPSSISYSEKINEHCSQGRYKDALQIFEETRQKGIA 514
            MV  G      VQPN            I+Y+  IN  C     K+AL +F   + +G  
Sbjct: 356 KMVSAG------VQPNL-----------ITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398

Query: 515 INKSTYMNLMNGLIKRRK 532
                Y  L++   K  K
Sbjct: 399 PTTRMYNMLIDAYCKLGK 416


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.134    0.394 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,102,571,109
Number of Sequences: 23463169
Number of extensions: 330973530
Number of successful extensions: 1223426
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9201
Number of HSP's successfully gapped in prelim test: 3994
Number of HSP's that attempted gapping in prelim test: 892999
Number of HSP's gapped (non-prelim): 100659
length of query: 539
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 391
effective length of database: 8,886,646,355
effective search space: 3474678724805
effective search space used: 3474678724805
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)